RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP1M1 (Homo sapiens)

Ensembl gene IDs: ENSG00000072958

Ensembl transcript IDs: ENST00000291439.8, ENST00000429941.6, ENST00000444449.6, ENST00000586461.1, ENST00000586543.1, ENST00000586957.1, ENST00000589822.5, ENST00000589991.1, ENST00000590263.5, ENST00000590756.5, ENST00000590945.5, ENST00000591775.5, ENST00000591966.1

Found 738 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCAGGGAGCAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTaGCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGA +
Preference number: 1 (lower is better)
Translates to: SREQADATVAPERAR*QPRRVNGPLRALPG
Trigger: TCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCTCCCTGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR GCA 90 bp CGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTaGAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: RPGRTADCSGAISAH*KLRFPGSRHSPASA
Trigger: GGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 90 bp ACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATaGCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTT +
Preference number: 1 (lower is better)
Translates to: TPLLAWRGWRFLRGR*HLQLAGWQALAKLF
Trigger: AAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR TCA 90 bp TCCCCTGGTGGGTCAATACTGATCTGGCTGAGTGACAGCATCTCGTaGCCCAGGCTGGCCCTGGGAAGGCGCCACAGGCGAGGCCTGCGA +
Preference number: 1 (lower is better)
Translates to: SPGGSILIWLSDSIS*PRLALGRRHRRGLR
Trigger: TCGCAGGCCTCGCCTGTGGCGCCTTCCCAGGGCCAGCCTGGGTCACGAGATGCTGTCACTCAGCCAGATCAGTATTGACCCACCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR CCA 90 bp CCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTaGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGC +
Preference number: 1 (lower is better)
Translates to: PGEAGASFVADATCS*LAGKRWPSFLVPGS
Trigger: GCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR CCA 90 bp CGTGGGGCCACAGGGAAGGTCGGCGACAAAACCAGGCAAGCCCTGTaGTCACGCAGGAGGAGTTGGGACCACGCTGCATCAGAGGAAGGC +
Preference number: 1 (lower is better)
Translates to: RGATGKVGDKTRQAL*SRRRSWDHAASEEG
Trigger: GCCTTCCTCTGATGCAGCGTGGTCCCAACTCCTCCTGCGTGACCACAGGGCTTGCCTGGTTTTGTCGCCGACCTTCCCTGTGGCCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 90 bp TGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTaGAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCT +
Preference number: 1 (lower is better)
Translates to: CWPGEAGASFVADAT*SWLAGKRWPSFLVP
Trigger: AGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR CCA 90 bp GGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTaGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGC +
Preference number: 1 (lower is better)
Translates to: GWRFLRGRCHLQLAG*QALAKLFGTWELNS
Trigger: GCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR CCA 90 bp GCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTaGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAA +
Preference number: 1 (lower is better)
Translates to: ARLALPSWQMPPAAG*LASVGQAFWYLGAQ
Trigger: TTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR CCA 90 bp ACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTaGACCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTCTCACCAA +
Preference number: 1 (lower is better)
Translates to: TGDQAQTWVTRGPAL*TLSGKKSEAGVSHQ
Trigger: TTGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR TCA 90 bp GTGATCGGTCTGCCTCGGCTTCCCAAAGTATTGGGCTCACGGGCGTaGGCCACCACGCCTGGCCGAACGGTCGCCATTTGTATTTCATCT +
Preference number: 1 (lower is better)
Translates to: VIGLPRLPKVLGSRA*ATTPGRTVAICISS
Trigger: AGATGAAATACAAATGGCGACCGTTCGGCCAGGCGTGGTGGCTCACGCCCGTGAGCCCAATACTTTGGGAAGCCGAGGCAGACCGATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 90 bp TGCTGCTGTGGACACAAGGACCATGCTCTGAGTGGGCCATCAGTTTaGGGAGAGGTGGGGACAAGCTGTTGGCCATCTGAGGGTGCAGCA +
Preference number: 1 (lower is better)
Translates to: CCCGHKDHALSGPSV*GEVGTSCWPSEGAA
Trigger: TGCTGCACCCTCAGATGGCCAACAGCTTGTCCCCACCTCTCCCCAAACTGATGGCCCACTCAGAGCATGGTCCTTGTGTCCACAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 90 bp GTCGGCGACAAAACCAGGCAAGCCCTGTGGTCACGCAGGAGGAGTTaGGACCACGCTGCATCAGAGGAAGGCTGTGGAGTATTCAATGAA +
Preference number: 1 (lower is better)
Translates to: VGDKTRQALWSRRRS*DHAASEEGCGVFNE
Trigger: TTCATTGAATACTCCACAGCCTTCCTCTGATGCAGCGTGGTCCCAACTCCTCCTGCGTGACCACAGGGCTTGCCTGGTTTTGTCGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 90 bp GCCCACGAACCTGCATTTCTAGCTAGGACACAGGGGATGCTGCTGTaGACACAAGGACCATGCTCTGAGTGGGCCATCAGTTTGGGGAGA +
Preference number: 1 (lower is better)
Translates to: AHEPAFLARTQGMLL*TQGPCSEWAISLGR
Trigger: TCTCCCCAAACTGATGGCCCACTCAGAGCATGGTCCTTGTGTCCACAGCAGCATCCCCTGTGTCCTAGCTAGAAATGCAGGTTCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 90 bp TTTGAGACAGTGTCTCACTGTGTCGCTCAGGCAAGAGTACAACGGTaGCATCTTGACTCACTGCGAGCGCCATCTCCCGGGTTCAAGCGA +
Preference number: 1 (lower is better)
Translates to: FETVSHCVAQARVQR*HLDSLRAPSPGFKR
Trigger: TCGCTTGAACCCGGGAGATGGCGCTCGCAGTGAGTCAAGATGGCACCGTTGTACTCTTGCCTGAGCGACACAGTGAGACACTGTCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 90 bp CTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTaGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAA +
Preference number: 1 (lower is better)
Translates to: LQLAGWQALAKLFGT*ELNSIKGCNLYTEK
Trigger: TTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR GCA 90 bp TGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATaGACAAAGACAAGTTCCAGGAACACCCATAAACCCATAACGTTC +
Preference number: 1 (lower is better)
Translates to: WVGHGDSEGNTNSNE*TKTSSRNTHKPITF
Trigger: GAACGTTATGGGTTTATGGGTGTTCCTGGAACTTGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR TCA 90 bp CTGCAAACCAGATTGATATTACAAGCGTGGGGTCTAAATGAGTGGTaGCTTTTTCTCCTGTGGATCTCAGGCAGAGAGAGGACACAGTGC +
Preference number: 1 (lower is better)
Translates to: LQTRLILQAWGLNEW*LFLLWISGRERTQC
Trigger: GCACTGTGTCCTCTCTCTGCCTGAGATCCACAGGAGAAAAAGTCACCACTCATTTAGACCCCACGCTTGTAATATCAATCTGGTTTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR TCA 90 bp TGGTTGTCTGCAAACCAGATTGATATTACAAGCGTGGGGTCTAAATaGGTGGTGACTTTTTCTCCTGTGGATCTCAGGCAGAGAGAGGAC +
Preference number: 1 (lower is better)
Translates to: WLSANQIDITSVGSK*VVTFSPVDLRQRED
Trigger: GTCCTCTCTCTGCCTGAGATCCACAGGAGAAAAAGTCACCACTCATTTAGACCCCACGCTTGTAATATCAATCTGGTTTGCAGACAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 90 bp GTTTCAAGTTTGCTTTCATGCACGTGTTTTGTAATTTTCAGGATGTaGCCTCATGTTGAGGGTCTATTGTGTGCGAGGATCTTAGGTAAC +
Preference number: 1 (lower is better)
Translates to: VSSLLSCTCFVIFRM*PHVEGLLCARILGN
Trigger: GTTACCTAAGATCCTCGCACACAATAGACCCTCAACATGAGGGCACATCCTGAAAATTACAAAACACGTGCATGAAAGCAAACTTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 90 bp TCGGACTTTTGTTGTTCCAGTTGTGAAACCAGTTCTCTGTCCAATTaGTCTTTGGAGAGACATTTTAATCTCTTAGTGTTGCTGTTAGGA +
Preference number: 1 (lower is better)
Translates to: SDFCCSSCETSSLSN*SLERHFNLLVLLLG
Trigger: TCCTAACAGCAACACTAAGAGATTAAAATGTCTCTCCAAAGAGCAATTGGACAGAGAACTGGTTTCACAACTGGAACAACAAAAGTCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 90 bp CATATCACTGCTCTAGTTGAATTCATTTTCACTGCTGTAATCTCTTaGATGAATGGACTACAGTGGTCCCTTTTCCTATTGAAGGACTTT +
Preference number: 1 (lower is better)
Translates to: HITALVEFIFTAVIS*MNGLQWSLFLLKDF
Trigger: AAAGTCCTTCAATAGGAAAAGGGACCACTGTAGTCCATTCATGCAAGAGATTACAGCAGTGAAAATGAATTCAACTAGAGCAGTGATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 90 bp TGTAAGTGTAACTGTACACCTGATATTTCTCTATATATTGGTGCATaGACTTCTCAGGGCTTTTCTCAACTAGAGTTCTGCAAGAGAATT +
Preference number: 1 (lower is better)
Translates to: CKCNCTPDISLYIGA*TSQGFSQLEFCKRI
Trigger: AATTCTCTTGCAGAACTCTAGTTGAGAAAAGCCCTGAGAAGTCCATGCACCAATATATAGAGAAATATCAGGTGTACAGTTACACTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 90 bp AGGACTTTTGGTTGCTTTCCAATTTCCTGCTATCATGAACTATGCTaGTGTAAGTGTAACTGTACACCTGATATTTCTCTATATATTGGT +
Preference number: 1 (lower is better)
Translates to: RTFGCFPISCYHELC*CKCNCTPDISLYIG
Trigger: ACCAATATATAGAGAAATATCAGGTGTACAGTTACACTTACAGCAGCATAGTTCATGATAGCAGGAAATTGGAAAGCAACCAAAAGTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR GCA 90 bp GCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAAGGTGTGTCCCCTGGTaGTGCCACCAGGAGCCCCGA +
Preference number: 2 (lower is better)
Translates to: APAGLARLALPSWQMPPARCVPW*CHQEPR
Trigger: TCGGGGCTCCTGGTGGCAGCACCAGGGGACACACCT...TGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp GACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGAGCAGATGGCCTaGGGAAGGCAGGGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: DAPAGLARLALPSWQMPPAEQMA*GRQGSL
Trigger: CAGGGACCCCTGCCTTCCCCAGGCCATCTGCTCTGC...AGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGGGCAGGTGTGTCCCCTaGTGCTGCCACCAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: EAGASFVADATCSWLAGKGRCVP*CCHQEP
Trigger: GGGCTCCTGGTGGCAGCACCAGGGGACACACCTGCC...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp AGCAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTGCCAGCCTCGACGTGCTGGCGCTTCCTTCGTaGCAGATGCCACCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: SRQTLQWPPSAPGASLDVLALPS*QMPPAA
Trigger: AGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAG...CACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR TCA 90 bp ACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACTGGGAAAGGGGCTTCTaGGACGAGTGTCGACGGCAG +
Preference number: 2 (lower is better)
Translates to: TTPLLAWRGWRFLRGRCHWERGF*DECRRQ
Trigger: CTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCA...GTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp GCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAGGCCCCTCCATCTGGTaGGTTTGGCAGGTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: ARLALPSWQMPPAAGWLAGPSIW*VWQVCP
Trigger: GGGACACACCTGCCAAACCCACCAGATGGAGGGGCC...TGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp ACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCGACCCAGGCTGGCCCTaGGAAGGCGCCACAGGCGAG +
Preference number: 2 (lower is better)
Translates to: TRGPALWTLSGKKSEAGVDPGWP*EGATGE
Trigger: CTCGCCTGTGGCGCCTTCCCAGGGCCAGCCTGGGTC...GACGCCAGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR CCA 90 bp CCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAAGGATGCCACCTGCAGCTaGCTGGCTGGCAAGCGTTGG +
Preference number: 2 (lower is better)
Translates to: PASTCKWPAAGAAGKEDKDATCS*LAGKRW
Trigger: CCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATC...CTTGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR GCA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGTGTGTCCCCTGGTaGTGCCACCAGGAGCCCCGA +
Preference number: 2 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGRCVPW*CHQEPR
Trigger: TCGGGGCTCCTGGTGGCAGCACCAGGGGACACACCT...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp CAGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAATCCATCTGGTGGGTTTaGCAGGTGTGTCCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: QVPASTCKWPAAGAAGKESIWWV*QVCPLV
Trigger: CACCAGGGGACACACCTGCCAAACCCACCAGATGGA...TTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR CCA 90 bp GGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCTCCATCTGGTGGGTTTaGCAGGTGTGTCCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: GNKTTPLLAWRGWRFLRGSIWWV*QVCPLV
Trigger: CACCAGGGGACACACCTGCCAAACCCACCAGATGGA...GCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR TCA 90 bp ACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCAGTGACAGCATCTCGTaGCCCAGGCTGGCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: TRGPALWTLSGKKSEAGVSDSIS*PRLALG
Trigger: TCCCAGGGCCAGCCTGGGTCACGAGATGCTGTCACT...GACGCCAGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR GCA 90 bp TGGGTGACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTACAAAACGACGCCCCTaGTGGCCTGGCGAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: WVTRGPALWTLSGKKSEATKRRP*WPGEAG
Trigger: GCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGT...AGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR CCA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAGGCCCCTCCATCTGGTaGGTTTGGCAGGTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGGPSIW*VWQVCP
Trigger: GGGACACACCTGCCAAACCCACCAGATGGAGGGGCC...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp GGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTGCAGAGCAGATGGCCTaGGGAAGGCAGGGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: GRCHLQLAGWQALAKLFGAEQMA*GRQGSL
Trigger: CAGGGACCCCTGCCTTCCCCAGGCCATCTGCTCTGC...ACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCAAACCCCACCTCCCCTaGTGGGTCAATACTGATCTG +
Preference number: 2 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALKPHLP*WVNTDL
Trigger: CAGATCAGTATTGACCCACCAGGGGAGGTGGGGTTT...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR TCA 90 bp GCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAAGAAACGAGACTTCTTaGAGACCAGCCTCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: APAGLARLALPSWQMPPARNETS*RPASSG
Trigger: CCCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCT...TGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR GCA 90 bp TGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACACTCGTCCTCACCAAGTaGTTCCTGAGTGCCGTAGGA +
Preference number: 2 (lower is better)
Translates to: CQPRRVNGPLRALPGRKTLVLTK*FLSAVG
Trigger: TCCTACGGCACTCAGGAAGCACTTGGTGAGGACGAG...TGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR TCA 90 bp ACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCGGAAGACAAGAAGGGTaGGGGCTCGTCCTCACCAAG +
Preference number: 2 (lower is better)
Translates to: TRGPALWTLSGKKSEAGVGRQEG*GLVLTK
Trigger: CTTGGTGAGGACGAGCCCTCACCCTTCTTGTCTTCC...GACGCCAGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR CCA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAAACGACGCCCCTGCTaGCCTGGCGAGGCTGGCGCT +
Preference number: 2 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQKRRPC*PGEAGA
Trigger: AGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTT...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR CCA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAGGCCCCTCCATCTGGTaGGTTTGGCAGGTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQGPSIW*VWQVCP
Trigger: GGGACACACCTGCCAAACCCACCAGATGGAGGGGCC...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR CCA 90 bp GACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTAAGCTTTTTGGTACCTaGGAGCTCAACAGCATAAAA +
Preference number: 2 (lower is better)
Translates to: DAPAGLARLALPSWQMPPKLFGT*ELNSIK
Trigger: TTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTT...AGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAACCACCTGCAGCTGGCTaGCTGGCAAGCGTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQPPAAG*LASVGQ
Trigger: TTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGG...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR CAA 90 bp TTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTaGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGC +
Preference number: 2 (lower is better)
Translates to: FLRGRCHLQLAGWQA*AKLFGTWELNSIKG
Trigger: GCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR TCA 90 bp TGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGAGAAACGAGACTTCTTaGAGACCAGCCTCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: WQMPPAAGWLASVGQAFWRNETS*RPASSG
Trigger: CCCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCT...CCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCGCAGAGCAGATGGCCTaGGGAAGGCAGGGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFAEQMA*GRQGSL
Trigger: CAGGGACCCCTGCCTTCCCCAGGCCATCTGCTCTGC...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR GCA 90 bp GTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGACATTCCTTCGTGGCAGATaGCACCTGCAGCTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: VGHGDSEGNTNSNECTKTFLRGR*HLQLAG
Trigger: GCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAA...TGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR CCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAGGCCCCTCCATCTGGTaGGTTTGGCAGGTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: LFGTWELNSIKGCNLYTEGPSIW*VWQVCP
Trigger: GGGACACACCTGCCAAACCCACCAGATGGAGGGGCC...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp AGTGTTGCTGTTAGGATCTTCCCTGAGTCTGATATGTTCTGTGGTTCGACTATGGACGTGGGTGACACGTaGCCCCGCTCTCTGGACCCT +
Preference number: 2 (lower is better)
Translates to: SVAVRIFPESDMFCGSTMDVGDT*PRSLDP
Trigger: AGGGTCCAGAGAGCGGGGCCACGTGTCACCCACGTC...CATAGTCGAACCACAGAACATATCAGACTCAGGGAAGATCCTAACAGCAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CCA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTCCATCTGGTGGGTTTaGCAGGTGTGTCCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFSIWWV*QVCPLV
Trigger: CACCAGGGGACACACCTGCCAAACCCACCAGATGGA...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCGCAGAGCAGATGGCCTaGGGAAGGCAGGGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: WELNSIKGCNLYTEKFHIAEQMA*GRQGSL
Trigger: CAGGGACCCCTGCCTTCCCCAGGCCATCTGCTCTGC...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp AGGGTAACACAAACAGCAACGAATGCACAAAGACAAGTTCCAGGAACACCCATACCACCTGCAGCTGGCTaGCTGGCAAGCGTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: RVTQTATNAQRQVPGTPIPPAAG*LASVGQ
Trigger: TTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGG...TATGGGTGTTCCTGGAACTTGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR-3UTR CCA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCGTGGCCCAGGAGTGGTaGCCCATGGTCCAGCACTGC +
Preference number: 2 (lower is better)
Translates to: YTKECANHQCLMDSREHTVAQEW*PMVQHC
Trigger: GCAGTGCTGGACCATGGGCCACCACTCCTGGGCCAC...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CCA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCGTGGCCTCCTCTGTGTaGCCCAGGAGTGGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: YTKECANHQCLMDSREHTVASSV*PRSGGP
Trigger: TGGGCCACCACTCCTGGGCCACACAGAGGAGGCCAC...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR TCA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTTGGGAAAGGGGCTTCTaGGACGAGTGTCGACGGCAG +
Preference number: 2 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFWERGF*DECRRQ
Trigger: CTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCA...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CCA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCAGGAGTGGTGGCCCATaGTCCAGCACTGCAGCTGCC +
Preference number: 2 (lower is better)
Translates to: YTKECANHQCLMDSREHTRSGGP*SSTAAA
Trigger: GGCAGCTGCAGTGCTGGACCATGGGCCACCACTCCT...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CCA 90 bp GTGGTCCCTTTTCCTATTGAAGGACTTTTGGTTGCTTTCCAATTTCCTGCTATCCTGCAGCTGGCTGGCTaGCAAGCGTTGGCCAAGCTT +
Preference number: 2 (lower is better)
Translates to: VVPFPIEGLLVAFQFPAILQLAG*QALAKL
Trigger: AAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAG...GATAGCAGGAAATTGGAAAGCAACCAAAAGTCCTTCAATAGGAAAAGGGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CCA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCCGTGGCCCCGCTCTCTaGACCCTCAGTGGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: YTKECANHQCLMDSREHTRGPAL*TLSGKK
Trigger: CTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACG...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CCA 90 bp AGTGTTGCTGTTAGGATCTTCCCTGAGTCTGATATGTTCTGTGGTTCGACTATGGTGGGGACAAGCTGTTaGCCATCTGAGGGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: SVAVRIFPESDMFCGSTMVGTSC*PSEGAA
Trigger: TGCTGCACCCTCAGATGGCCAACAGCTTGTCCCCAC...CATAGTCGAACCACAGAACATATCAGACTCAGGGAAGATCCTAACAGCAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CCA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCTCCATCTGGTGGGTTTaGCAGGTGTGTCCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: WELNSIKGCNLYTEKFHISIWWV*QVCPLV
Trigger: CACCAGGGGACACACCTGCCAAACCCACCAGATGGA...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR TCA 90 bp TACGAATTTAGGTTTGTGTATCATGCTTTGGACTCAACGGTTTCCTGGATCTTAACAGGGTGGGGACAGTaGCAGCCCACACTGGAGCTA +
Preference number: 2 (lower is better)
Translates to: YEFRFVYHALDSTVSWILTGWGQ*QPTLEL
Trigger: TAGCTCCAGTGTGGGCTGTCACTGTCCCCACCCTGT...TAAGATCCAGGAAACCGTTGAGTCCAAAGCATGATACACAAACCTAAATTCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR GCA 90 bp GTGGTCCCTTTTCCTATTGAAGGACTTTTGGTTGCTTTCCAATTTCCTGCTATCGGACACAGGGGATGCTaGTGTGGACACAAGGACCAT +
Preference number: 2 (lower is better)
Translates to: VVPFPIEGLLVAFQFPAIGHRGC*CGHKDH
Trigger: ATGGTCCTTGTGTCCACAGCAGCATCCCCTGTGTCC...GATAGCAGGAAATTGGAAAGCAACCAAAAGTCCTTCAATAGGAAAAGGGACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR TCA 90 bp AGTGTTGCTGTTAGGATCTTCCCTGAGTCTGATATGTTCTGTGGTTCGACTATGAGCGTGGGGTCTAAATaGGTGGTGACTTTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: SVAVRIFPESDMFCGSTMSVGSK*VVTFSP
Trigger: AGGAGAAAAAGTCACCACTCATTTAGACCCCACGCT...CATAGTCGAACCACAGAACATATCAGACTCAGGGAAGATCCTAACAGCAACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CCA 90 bp GTGGTCCCTTTTCCTATTGAAGGACTTTTGGTTGCTTTCCAATTTCCTGCTATCGCAGTAACACTATCTTaGCTCACTGCAACCTCCACC +
Preference number: 2 (lower is better)
Translates to: VVPFPIEGLLVAFQFPAIAVTLS*LTATST
Trigger: GGTGGAGGTTGCAGTGAGCCAAGATAGTGTTACTGC...GATAGCAGGAAATTGGAAAGCAACCAAAAGTCCTTCAATAGGAAAAGGGACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 90 bp GCGTCTGCTTCATTTCCTGCATTTCTACAGTCTGTAGTGGAGGGTTaGCAGGTCTTATCTGATAAGTTGCTGGAAACTGAAGTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: ASASFPAFLQSVVEG*QVLSDKLLETEVSL
Trigger: AAGAGAGACTTCAGTTTCCAGCAACTTATCAGATAAGACCTGCAAACCCTCCACTACAGACTGTAGAAATGCAGGAAATGAAGCAGACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CCA 90 bp GCTCTAGTTGAATTCATTTTCACTGCTGTAATCTCTTGCATGAATGGACTACAGGGGTCAATACTGATCTaGCTGAGTGACAGCATCTCG +
Preference number: 2 (lower is better)
Translates to: ALVEFIFTAVISCMNGLQGSILI*LSDSIS
Trigger: CGAGATGCTGTCACTCAGCCAGATCAGTATTGACCC...CTGTAGTCCATTCATGCAAGAGATTACAGCAGTGAAAATGAATTCAACTAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 90 bp CTGAAGTGTAACATATACACAAAAGAGTGTGCAAATCATCAATGCTaGATGGATTCTCGAGAGCACACCCATGTCACCTGCATCCAGATT +
Preference number: 2 (lower is better)
Translates to: LKCNIYTKECANHQC*MDSREHTHVTCIQI
Trigger: AATCTGGATGCAGGTGACATGGGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTATATGTTACACTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR TCA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCGGTCCCTTTTCCTATTaGAGGACTTTTGGTTGCTTT +
Preference number: 2 (lower is better)
Translates to: YTKECANHQCLMDSREHTGPFSY*RTFGCF
Trigger: AAAGCAACCAAAAGTCCTTCAATAGGAAAAGGGACC...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR GCA 90 bp AGTGTTGCTGTTAGGATCTTCCCTGAGTCTGATATGTTCTGTGGTTCGACTATGATCTCGTTAGACTTTTaGTGGATATATATAGATCCC +
Preference number: 2 (lower is better)
Translates to: SVAVRIFPESDMFCGSTMISLDF*WIYIDP
Trigger: GGGATCTATATATATCCAGCAAAAGTCTAACGAGAT...CATAGTCGAACCACAGAACATATCAGACTCAGGGAAGATCCTAACAGCAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CCA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCAAAAATATGAAAAATTaGCCCAGCATGGTGGCATGT +
Preference number: 2 (lower is better)
Translates to: YTKECANHQCLMDSREHTKNMKN*PSMVAC
Trigger: ACATGCCACCATGCTGGGCCAATTTTTCATATTTTT...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 90 bp TTTTGTTGTTCCAGTTGTGAAACCAGTTCTCTGTCCAATTGCTCTTaGGAGAGACATTTTAATCTCTTAGTGTTGCTGTTAGGATCTTCC +
Preference number: 2 (lower is better)
Translates to: FCCSSCETSSLSNCS*ERHFNLLVLLLGSS
Trigger: GGAAGATCCTAACAGCAACACTAAGAGATTAAAATGTCTCTCCAAAGAGCAATTGGACAGAGAACTGGTTTCACAACTGGAACAACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 90 bp TTGTATTTCATCTTCTTCATACTGTCTGTTCACACACAGCCCATTTaGTTAGGTTCTCTTTTTCTGATTTGTAGACGTTATAACCCGCAT +
Preference number: 2 (lower is better)
Translates to: LYFIFFILSVHTQPI*LGSLFLICRRYNPH
Trigger: ATGCGGGTTATAACGTCTACAAATCAGAAAAAGAGAACCTAACAAAATGGGCTGTGTGTGAACAGACAGTATGAAGAAGATGAAATACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 72 bp CAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTaGCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCG +
Preference number: 3 (lower is better)
Translates to: QADATVAPERAR*QPRRVNGPLRA
Trigger: CGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR TCA 72 bp GGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTaGCACGTGGCCCCGCTCTCTGGACCCTCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: GWGGRVTKRRRG*HVAPLSGPSVG
Trigger: TCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR GCA 72 bp CTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATaGCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCC +
Preference number: 3 (lower is better)
Translates to: LAWRGWRFLRGR*HLQLAGWQALA
Trigger: GGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR CCA 72 bp CCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTaGCAGGTGTGTCCCCTGGTGCTGCCACCAGGAGCC +
Preference number: 3 (lower is better)
Translates to: PETREGPSIWWV*QVCPLVLPPGA
Trigger: GGCTCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR CCA 72 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTaGGTGACACGTGGCCCCGCTCTCTGGACCCTCAGT +
Preference number: 3 (lower is better)
Translates to: HRVGRTGDQAQT*VTRGPALWTLS
Trigger: ACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR CCA 72 bp GGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTaGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: GNKTTPLLAWRG*RFLRGRCHLQL
Trigger: CAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR GCA 72 bp GGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTaGAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTT +
Preference number: 3 (lower is better)
Translates to: GEAGASFVADAT*SWLAGKRWPSF
Trigger: AAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR TCA 72 bp CTGCCTCGGCTTCCCAAAGTATTGGGCTCACGGGCGTaGGCCACCACGCCTGGCCGAACGGTCGCCATTTGT +
Preference number: 3 (lower is better)
Translates to: LPRLPKVLGSRA*ATTPGRTVAIC
Trigger: ACAAATGGCGACCGTTCGGCCAGGCGTGGTGGCTCACGCCCGTGAGCCCAATACTTTGGGAAGCCGAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CAA 90 bp TGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAGCTGGCTGGCAAGCGTaGGCCAAGCTTTTTGGTACC +
Preference number: 3 (lower is better)
Translates to: CQPRRVNGPLRALPGRKTAGWQA*AKLFGT
Trigger: GGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGC...TGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR TCA 72 bp GGCTTTGGTCTGAGGCCTGGGCTGGGGCAGCGTCATTaGCTGAGATGGGGAAGACCTACGTGGGCGGAAGGT +
Preference number: 3 (lower is better)
Translates to: GFGLRPGLGQRH*LRWGRPTWAEG
Trigger: ACCTTCCGCCCACGTAGGTCTTCCCCATCTCAGTCAATGACGCTGCCCCAGCCCAGGCCTCAGACCAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 72 bp GCCCAGGAGTGGTGGCCCATGGTCCAGCACTGCAGCTaGCTCTTCCCGCAGCTGCTTTTCCTGTGTTTCAGC +
Preference number: 3 (lower is better)
Translates to: AQEWWPMVQHCS*LFPQLLFLCFS
Trigger: GCTGAAACACAGGAAAAGCAGCTGCGGGAAGAGGCAGCTGCAGTGCTGGACCATGGGCCACCACTCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CAA 90 bp GACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTAAGAAACGAGACTTCTaGAAGACCAGCCTCTTCTGG +
Preference number: 3 (lower is better)
Translates to: DAPAGLARLALPSWQMPPKKRDF*KTSLFW
Trigger: CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTT...AGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CAA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTaGGTACCTGGGAGCTCAACA +
Preference number: 3 (lower is better)
Translates to: EAGASFVADATCSWLAGKRWPSF*VPGSST
Trigger: TGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACG...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR CCA 72 bp GCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTaGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTG +
Preference number: 3 (lower is better)
Translates to: ALPSWQMPPAAG*LASVGQAFWYL
Trigger: CAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR TCA 72 bp CTGTGTCGCTCAGGCAAGAGTACAACGGTGCCATCTTaGCTCACTGCGAGCGCCATCTCCCGGGTTCAAGCG +
Preference number: 3 (lower is better)
Translates to: LCRSGKSTTVPS*LTASAISRVQA
Trigger: CGCTTGAACCCGGGAGATGGCGCTCGCAGTGAGTCAAGATGGCACCGTTGTACTCTTGCCTGAGCGACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 72 bp AGGACACAGGGGATGCTGCTGTGGACACAAGGACCATaGTCTGAGTGGGCCATCAGTTTGGGGAGAGGTGGG +
Preference number: 3 (lower is better)
Translates to: RTQGMLLWTQGP*SEWAISLGRGG
Trigger: CCCACCTCTCCCCAAACTGATGGCCCACTCAGAGCATGGTCCTTGTGTCCACAGCAGCATCCCCTGTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 72 bp GCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTaGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCA +
Preference number: 3 (lower is better)
Translates to: ADATCSWLAGKR*PSFLVPGSSTA
Trigger: TGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR CCA 72 bp TTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTaGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAG +
Preference number: 3 (lower is better)
Translates to: FLRGRCHLQLAG*QALAKLFGTWE
Trigger: CTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
3UTR CCA 72 bp GGGATGCTGCTGTGGACACAAGGACCATGCTCTGAGTaGGCCATCAGTTTGGGGAGAGGTGGGGACAAGCTG +
Preference number: 3 (lower is better)
Translates to: GMLLWTQGPCSE*AISLGRGGDKL
Trigger: CAGCTTGTCCCCACCTCTCCCCAAACTGATGGCCCACTCAGAGCATGGTCCTTGTGTCCACAGCAGCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 72 bp CGTCCTCACCAAGTGCTTCCTGAGTGCCGTAGGACGTaGGTGGGACATGGGGACAGTGAGGGTAACACAAAC +
Preference number: 3 (lower is better)
Translates to: RPHQVLPECRRT*VGHGDSEGNTN
Trigger: GTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACGTCCTACGGCACTCAGGAAGCACTTGGTGAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
3UTR CCA 72 bp GGACACAAGGACCATGCTCTGAGTGGGCCATCAGTTTaGGGAGAGGTGGGGACAAGCTGTTGGCCATCTGAG +
Preference number: 3 (lower is better)
Translates to: GHKDHALSGPSV*GEVGTSCWPSE
Trigger: CTCAGATGGCCAACAGCTTGTCCCCACCTCTCCCCAAACTGATGGCCCACTCAGAGCATGGTCCTTGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 72 bp GAGGGGGCCAAGAGCAGGCAGCACTTCCTGCATATGTaGTATTTCCCCCATGGACCAAGTAGCAGTTCACAG +
Preference number: 3 (lower is better)
Translates to: EGAKSRQHFLHM*YFPHGPSSSSQ
Trigger: CTGTGAACTGCTACTTGGTCCATGGGGGAAATAGCACATATGCAGGAAGTGCTGCCTGCTCTTGGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 72 bp GCATTTCACCATCTTCCCGATGCCCAAAGTCCTATCTaGCACCTGGCCCCCAAACCTAAACCCGGTGGTTTC +
Preference number: 3 (lower is better)
Translates to: AFHHLPDAQSPI*HLAPKPKPGGF
Trigger: GAAACCACCGGGTTTAGGTTTGGGGGCCAGGTGGCAGATAGGACTTTGGGCATCGGGAAGATGGTGAAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 72 bp AGGAGTCATCTCCACTGCATTTCACCATCTTCCCGATaGCCAAAGTCCTATCTGCCACCTGGCCCCCAAACC +
Preference number: 3 (lower is better)
Translates to: RSHLHCISPSSR*PKSYLPPGPQT
Trigger: GGTTTGGGGGCCAGGTGGCAGATAGGACTTTGGGCATCGGGAAGATGGTGAAATGCAGTGGAGATGACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 72 bp CCTGCATTTCTAGCTAGGACACAGGGGATGCTGCTGTaGACACAAGGACCATGCTCTGAGTGGGCCATCAGT +
Preference number: 3 (lower is better)
Translates to: PAFLARTQGMLL*TQGPCSEWAIS
Trigger: ACTGATGGCCCACTCAGAGCATGGTCCTTGTGTCCACAGCAGCATCCCCTGTGTCCTAGCTAGAAATGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 72 bp TCGAGGATCCCAGCTTCACGCAGGAGTCATCTCCACTaGATTTCACCATCTTCCCGATGCCCAAAGTCCTAT +
Preference number: 3 (lower is better)
Translates to: SRIPASRRSHLH*ISPSSRCPKSY
Trigger: ATAGGACTTTGGGCATCGGGAAGATGGTGAAATGCAGTGGAGATGACTCCTGCGTGAAGCTGGGATCCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 72 bp GCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTaGGAGCTCAACAGCATAAAAGGCTGTAACCTCTAC +
Preference number: 3 (lower is better)
Translates to: AGWQALAKLFGT*ELNSIKGCNLY
Trigger: GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR GCA 72 bp TTTATGGGCACGGCTAGGTGCGTCTGCTTCATTTCCTaGATTTCTACAGTCTGTAGTGGAGGGTTTGCAGGT +
Preference number: 3 (lower is better)
Translates to: FMGTARCVCFIS*ISTVCSGGFAG
Trigger: ACCTGCAAACCCTCCACTACAGACTGTAGAAATGCAGGAAATGAAGCAGACGCACCTAGCCGTGCCCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CAA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAGAAACGAGACTTCTaGAAGACCAGCCTCTTCTGG +
Preference number: 3 (lower is better)
Translates to: LFGTWELNSIKGCNLYTEKKRDF*KTSLFW
Trigger: CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTT...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CAA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTAAGAAACGAGACTTCTaGAAGACCAGCCTCTTCTGG +
Preference number: 3 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFKKRDF*KTSLFW
Trigger: CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTT...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
3UTR-3UTR CAA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCTGCAGTAACACTATCTaGGCTCACTGCAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: YTKECANHQCLMDSREHTCSNTI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATAGTGTTACTGCA...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR TCA 72 bp GCAAACCAGATTGATATTACAAGCGTGGGGTCTAAATaGGTGGTGACTTTTTCTCCTGTGGATCTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: ANQIDITSVGSK*VVTFSPVDLRQ
Trigger: CTGCCTGAGATCCACAGGAGAAAAAGTCACCACTCATTTAGACCCCACGCTTGTAATATCAATCTGGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR TCA 72 bp CCATGCTCTATCTTCGGACTTTTGTTGTTCCAGTTGTaGAACCAGTTCTCTGTCCAATTGCTCTTTGGAGAG +
Preference number: 3 (lower is better)
Translates to: PCSIFGLLLFQL*NQFSVQLLFGE
Trigger: CTCTCCAAAGAGCAATTGGACAGAGAACTGGTTTCACAACTGGAACAACAAAAGTCCGAAGATAGAGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR TCA 72 bp ACATATACACAAAAGAGTGTGCAAATCATCAATGCTTaGTGGATTCTCGAGAGCACACCCATGTCACCTGCA +
Preference number: 3 (lower is better)
Translates to: TYTQKSVQIINA*WILESTPMSPA
Trigger: TGCAGGTGACATGGGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR TCA 72 bp CCCTTCCGTCTGAGATCACTTTCCTTGTGCCTGATGTaGGTACACTGTTTACAATTTTCTTTAGTGTTAGCC +
Preference number: 3 (lower is better)
Translates to: PFRLRSLSLCLM*VHCLQFSLVLA
Trigger: GGCTAACACTAAAGAAAATTGTAAACAGTGTACTCACATCAGGCACAAGGAAAGTGATCTCAGACGGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CAA 90 bp GTGGTCCCTTTTCCTATTGAAGGACTTTTGGTTGCTTTCCAATTTCCTGCTATCCACACACAGCCCATTTaGTTAGGTTCTCTTTTTCTG +
Preference number: 3 (lower is better)
Translates to: VVPFPIEGLLVAFQFPAIHTQPI*LGSLFL
Trigger: CAGAAAAAGAGAACCTAACAAAATGGGCTGTGTGTG...GATAGCAGGAAATTGGAAAGCAACCAAAAGTCCTTCAATAGGAAAAGGGACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 72 bp TGTAACATATACACAAAAGAGTGTGCAAATCATCAATaGTTGATGGATTCTCGAGAGCACACCCATGTCACC +
Preference number: 3 (lower is better)
Translates to: CNIYTKECANHQ*LMDSREHTHVT
Trigger: GGTGACATGGGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTATATGTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR-3UTR CAA 90 bp GCTCTAGTTGAATTCATTTTCACTGCTGTAATCTCTTGCATGAATGGACTACAGCCTGCTGTTTCAAGTTaGCTTTCATGCACGTGTTTT +
Preference number: 3 (lower is better)
Translates to: ALVEFIFTAVISCMNGLQPAVSS*LSCTCF
Trigger: AAAACACGTGCATGAAAGCAAACTTGAAACAGCAGG...CTGTAGTCCATTCATGCAAGAGATTACAGCAGTGAAAATGAATTCAACTAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 72 bp AACTGTACACCTGATATTTCTCTATATATTGGTGCATaGACTTCTCAGGGCTTTTCTCAACTAGAGTTCTGC +
Preference number: 3 (lower is better)
Translates to: NCTPDISLYIGA*TSQGFSQLEFC
Trigger: GCAGAACTCTAGTTGAGAAAAGCCCTGAGAAGTCCATGCACCAATATATAGAGAAATATCAGGTGTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 72 bp TTTGGTTGCTTTCCAATTTCCTGCTATCATGAACTATaGTGCTGTAAGTGTAACTGTACACCTGATATTTCT +
Preference number: 3 (lower is better)
Translates to: FGCFPISCYHEL*CCKCNCTPDIS
Trigger: AGAAATATCAGGTGTACAGTTACACTTACAGCAGCATAGTTCATGATAGCAGGAAATTGGAAAGCAACCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR GCA 72 bp GTACACTGTTTACAATTTTCTTTAGTGTTAGCCTGCTaGTGGCAAACTCTTTCGTTATTTGTCTGCAAAATG +
Preference number: 3 (lower is better)
Translates to: VHCLQFSLVLAC*WQTLSLFVCKM
Trigger: CATTTTGCAGACAAATAACGAAAGAGTTTGCCAGCAGCAGGCTAACACTAAAGAAAATTGTAAACAGTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 72 bp CACTGTTTACAATTTTCTTTAGTGTTAGCCTGCTGCTaGCAAACTCTTTCGTTATTTGTCTGCAAAATGTTT +
Preference number: 3 (lower is better)
Translates to: HCLQFSLVLACC*QTLSLFVCKMF
Trigger: AAACATTTTGCAGACAAATAACGAAAGAGTTTGCCAGCAGCAGGCTAACACTAAAGAAAATTGTAAACAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CCA 72 bp CTTCAACTAGCAGCTTTGCTTCATTTACACCTGTTGTaGTTCCTAATATCTGGATTTATTTCTACAATCTTA +
Preference number: 3 (lower is better)
Translates to: LQLAALLHLHLL*FLISGFISTIL
Trigger: TAAGATTGTAGAAATAAATCCAGATATTAGGAACCACAACAGGTGTAAATGAAGCAAAGCTGCTAGTTGAAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp CCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGGGGACTGCTGGGCGTTaGGCAAGGCCGGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PLLAWRGWRFLRGRCHLQGTAGR*ARPGAA
Trigger: GGCGGCGCCCGGCCTTGCTCAACGCCCAGCAGTCCC...CTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AGCAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTGCCAGCCTCGACGTGGGTGACGGTGGCTGGTaGCCGCGGGGCCCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SRQTLQWPPSAPGASLDVGDGGW*PRGPCF
Trigger: GAAACAGGGGCCCCGCGGCCACCAGCCACCGTCACC...CACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGGGGACTGCTGGGCGTTaGGCAAGGCCGGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWGTAGR*ARPGAA
Trigger: GGCGGCGCCCGGCCTTGCTCAACGCCCAGCAGTCCC...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCGGTGACGGTGGCTGGTaGCCGCGGGGCCCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AGLARLALPSWQMPPAAGGDGGW*PRGPCF
Trigger: GAAACAGGGGCCCCGCGGCCACCAGCCACCGTCACC...GCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCGTTGGTGACGGTGGCTaGTGGCCGCGGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: AGLARLALPSWQMPPAAGVGDGG*WPRGPC
Trigger: ACAGGGGCCCCGCGGCCACCAGCCACCGTCACCAAC...GCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCGACCCAGGCTGGCCCTaGGAAGGCGCCACAGGCGAG +
Preference number: 4 (lower is better)
Translates to: PCWPGEAGASFVADATCSDPGWP*EGATGE
Trigger: CTCGCCTGTGGCGCCTTCCCAGGGCCAGCCTGGGTC...GCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp AGCAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTGCCAGCCTCGACGTGTGCGGTGTCCCAGCATaGGGGCTCCACAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRQTLQWPPSAPGASLDVCGVPA*GLHRVG
Trigger: CCCCACCCTGTGGAGCCCCCATGCTGGGACACCGCA...CACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGGTGGGGAGGACGGGTaGCCAAGCGCAGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPGGEDG*PSADVG
Trigger: ACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACC...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR GCA 90 bp GCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGGCGGACATGATGGCTaGAGGAGGCCTCGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: APAGLARLALPSWQMPPAGGHDG*RRPRQR
Trigger: CCGCTGCCGAGGCCTCCTGCAGCCATCATGTCCGCC...TGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGTGTCCCCTGGTGCTaGCACCAGGAGCCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALCVPWC*HQEPRG
Trigger: GCCTCGGGGCTCCTGGTGGCAGCACCAGGGGACACA...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp CCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGTGTCCCCTGGTGCTaGCACCAGGAGCCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PCWPGEAGASFVADATCSCVPWC*HQEPRG
Trigger: GCCTCGGGGCTCCTGGTGGCAGCACCAGGGGACACA...GCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp ACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCCCCGTGGGCCAGGATaGGCGACAGCATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TTPLLAWRGWRFLRGRCHPRGPG*ATASPP
Trigger: AGGAGGGGATGCTGTCGCCCATCCTGGCCCACGGGG...GTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp CCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCCCGAGGCCGGGGTGTTaGCTGCGACAGCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: PCWPGEAGASFVADATCSPRPGC*LRQPLT
Trigger: AGTGAGGGGCTGTCGCAGCCAACACCCCGGCCTCGG...GCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AGCAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTGCCAGCCTCGACGTGGCAGAGCAGATGGCCTaGGGAAGGCAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SRQTLQWPPSAPGASLDVAEQMA*GRQGSL
Trigger: CAGGGACCCCTGCCTTCCCCAGGCCATCTGCTCTGC...CACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAGGGACTGCTGGGCGTTaGGCAAGGCCGGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGGTAGR*ARPGAA
Trigger: GGCGGCGCCCGGCCTTGCTCAACGCCCAGCAGTCCC...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCAGGACACCGCGTTGGTaGCGGTGGCTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: VARDQGGPLHLVGLAGVSRTPRW*RWLVAA
Trigger: CGCGGCCACCAGCCACCGTCACCAACGCGGTGTCCT...GGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGAGGACACCGCGTTGGTaGCGGTGGCTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: EAGASFVADATCSWLAGKRTPRW*RWLVAA
Trigger: CGCGGCCACCAGCCACCGTCACCAACGCGGTGTCCT...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp CCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCAAGCGCAGACGTGGGTaGCACGTGGCCCCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PCWPGEAGASFVADATCSKRRRG*HVAPLS
Trigger: AGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTT...GCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCGGTGGGGAGGACGGGTaGCCAAGCGCAGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTGGEDG*PSADVG
Trigger: ACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACC...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR GCA 90 bp CCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGACAAAACGACGCCCCTaGTGGCCTGGCGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PLLAWRGWRFLRGRCHLQTKRRP*WPGEAG
Trigger: GCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGT...CTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AGCAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTGCCAGCCTCGACGTGGGCCCCTCCATCTGGTaGGTTTGGCAGGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SRQTLQWPPSAPGASLDVGPSIW*VWQVCP
Trigger: GGGACACACCTGCCAAACCCACCAGATGGAGGGGCC...CACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGGACCCAGGCTGGCCCTaGGAAGGCGCCACAGGCGAG +
Preference number: 4 (lower is better)
Translates to: EAGASFVADATCSWLAGKDPGWP*EGATGE
Trigger: CTCGCCTGTGGCGCCTTCCCAGGGCCAGCCTGGGTC...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCGACCAAGCGCAGACGTaGGTGACACGTGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: AGLARLALPSWQMPPAAGDQAQT*VTRGPA
Trigger: AGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTC...GCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGACCAAGCGCAGACGTaGGTGACACGTGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPDQAQT*VTRGPA
Trigger: AGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTC...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CCA 90 bp CCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGGTGGCCCAGGAGTGGTaGCCCATGGTCCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: PLLAWRGWRFLRGRCHLQVAQEW*PMVQHC
Trigger: GCAGTGCTGGACCATGGGCCACCACTCCTGGGCCAC...CTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCACGCCCGGGAAGGACTTaGTGGACCACACGATCTCGC +
Preference number: 4 (lower is better)
Translates to: APAGLARLALPSWQMPPARPGRT*WTTRSR
Trigger: GCGAGATCGTGTGGTCCATCAAGTCCTTCCCGGGCG...TGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCCGCCCGGGAAGGACTTaGTGGACCACACGATCTCGC +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALRPGRT*WTTRSR
Trigger: GCGAGATCGTGTGGTCCATCAAGTCCTTCCCGGGCG...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR TCA 90 bp CAGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAAAGCGCAGACGTGGGTaGCACGTGGCCCCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QVPASTCKWPAAGAAGKEKRRRG*HVAPLS
Trigger: AGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTT...TTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCAAGCGCAGACGTGGGTaGCACGTGGCCCCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTKRRRG*HVAPLS
Trigger: AGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTT...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR TCA 90 bp ACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGGGTGGGGAGGACGGGTaGCCAAGCGCAGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: TREGPSIWWVWQVCPLVLGGEDG*PSADVG
Trigger: ACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACC...CAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp GCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCATTGGGCTCACGGGCGTaGGCCACCACGCCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: ASFVADATCSWLAGKRWPLGSRA*ATTPGR
Trigger: TCGGCCAGGCGTGGTGGCTCACGCCCGTGAGCCCAA...TGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCGGCGCAGCTCGGGCATaGCCGAGAGGAAGACTCGCA +
Preference number: 4 (lower is better)
Translates to: GNKTTPLLAWRGWRFLRGGAARA*PRGRLA
Trigger: TGCGAGTCTTCCTCTCGGGCATGCCCGAGCTGCGCC...GCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp AGCAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTGCCAGCCTCGACGTGCCAGCTCCACGGATTTaGTTTTGCCGCGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: SRQTLQWPPSAPGASLDVPAPRI*FCRGPC
Trigger: ACACGGGCCGCGGCAAAAGCAAATCCGTGGAGCTGG...CACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp GTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCGGCCGGGGTGTTGGCTaGGACAGCCCCTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: VARDQGGPLHLVGLAGVSGRGVG*DSPSLG
Trigger: ACCCAGTGAGGGGCTGTCGCAGCCAACACCCCGGCC...GGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTTGTGTCCCCTGGTGCTaGCACCAGGAGCCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPCVPWC*HQEPRG
Trigger: GCCTCGGGGCTCCTGGTGGCAGCACCAGGGGACACA...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGATGTGTCCCCTGGTGCTaGCACCAGGAGCCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGCVPWC*HQEPRG
Trigger: GCCTCGGGGCTCCTGGTGGCAGCACCAGGGGACACA...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp CAGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAACAAAACGACGCCCCTaGTGGCCTGGCGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QVPASTCKWPAAGAAGKETKRRP*WPGEAG
Trigger: GCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGT...TTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp GACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTCCCGAGCGCGCCAGGTaGCAGCCTCGACGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: DAPAGLARLALPSWQMPPPERAR*QPRRVN
Trigger: ATTTACACGTCGAGGCTGGCACCTGGCGCGCTCGGG...AGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGGCCACAGGCGAGGCCTaGGAGTCCAGGGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWATGEA*ESREQA
Trigger: TGCCTGCTCCCTGGACTCGCAGGCCTCGCCTGTGGC...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGAGGGGCCCCAGGGATaGCTTCAGGGCTTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPEGPQG*LQGFGL
Trigger: CAGACCAAAGCCCTGAAGGCATCCCTGGGGCCCCTC...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAAGGCCCTCTCCTGTCCCTaGGGTGTCCCAGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: PASTCKWPAAGAAGKEDKALSCP*GVPAWG
Trigger: CCCCCATGCTGGGACACCGCAGGGACAGGAGAGGGC...CTTGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGGACGGTGGGGACTGCTaGGCGTTGAGCAAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: EAGASFVADATCSWLAGKDGGDC*ALSKAG
Trigger: CCCGGCCTTGCTCAACGCCCAGCAGTCCCCACCGTC...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCGGCAGGTGTGTCCCCTaGTGCTGCCACCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVGRCVP*CCHQEP
Trigger: GGGCTCCTGGTGGCAGCACCAGGGGACACACCTGCC...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGAGGCAGGTGTGTCCCCTaGTGCTGCCACCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGGRCVP*CCHQEP
Trigger: GGGCTCCTGGTGGCAGCACCAGGGGACACACCTGCC...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCGATGCCACCTGCAGCTaGCTGGCTGGCAAGCGTTGG +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALDATCS*LAGKRW
Trigger: CCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATC...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGACGCCCCTGCTGGCCTaGCGAGGCTGGCGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: EAGASFVADATCSWLAGKTPLLA*RGWRFL
Trigger: AAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGT...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCAAAACGACGCCCCTGCTaGCCTGGCGAGGCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: REGPSIWWVWQVCPLVLPKRRPC*PGEAGA
Trigger: AGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTT...TGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCGACGTGGGTGACACGTaGCCCCGCTCTCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTDVGDT*PRSLDP
Trigger: AGGGTCCAGAGAGCGGGGCCACGTGTCACCCACGTC...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CCA 90 bp GACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTTGTGTGGCCCAGGAGTaGTGGCCCATGGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: DAPAGLARLALPSWQMPPCVAQE*WPMVQH
Trigger: GTGCTGGACCATGGGCCACCACTCCTGGGCCACACA...AGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCGTGGCCTCCTCTGTGTaGCCCAGGAGTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTVASSV*PRSGGP
Trigger: TGGGCCACCACTCCTGGGCCACACAGAGGAGGCCAC...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCCAGGGCCATCAGCACTaGTCGGGGAGGGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GNKTTPLLAWRGWRFLRGQGHQH*SGRGPR
Trigger: TCTTGGCCCCCTCCCCGACCAGTGCTGATGGCCCTG...GCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGTGAGCCACCACGCCTaGCCGAACGGTCGCCATTTG +
Preference number: 4 (lower is better)
Translates to: APAGLARLALPSWQMPPAVSHHA*PNGRHL
Trigger: CAAATGGCGACCGTTCGGCCAGGCGTGGTGGCTCAC...TGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCAGAGGACCTTGTCGTTaGGGCCCAGGCGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVRGPCR*GPGAAR
Trigger: CCGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCT...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCAGCGACGGTGGGGACTaGTGGGCGTTGAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVSDGGD*WALSKA
Trigger: GGCCTTGCTCAACGCCCAGCAGTCCCCACCGTCGCT...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp TGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAAGCGACGGTGGGGACTaGTGGGCGTTGAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: CQPRRVNGPLRALPGRKTSDGGD*WALSKA
Trigger: GGCCTTGCTCAACGCCCAGCAGTCCCCACCGTCGCT...TGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGCGCAGCTCGGGCATaGCCGAGAGGAAGACTCGCA +
Preference number: 4 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPGAARA*PRGRLA
Trigger: TGCGAGTCTTCCTCTCGGGCATGCCCGAGCTGCGCC...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTCCAGCTCCACGGATTTaGTTTTGCCGCGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: DAPAGLARLALPSWQMPPPAPRI*FCRGPC
Trigger: ACACGGGCCGCGGCAAAAGCAAATCCGTGGAGCTGG...AGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAGGCCGGGGTGTTGGCTaGGACAGCCCCTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: ASFVADATCSWLAGKRWPGRGVG*DSPSLG
Trigger: ACCCAGTGAGGGGCTGTCGCAGCCAACACCCCGGCC...TGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTTCCTTCGTGGCAGATaGCACCTGCAGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGLARLALPSWQMPPAAGFLRGR*HLQLAG
Trigger: GCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAA...GCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCACAAAACGACGCCCCTaGTGGCCTGGCGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VARDQGGPLHLVGLAGVSTKRRP*WPGEAG
Trigger: GCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGT...GGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGCCCGCTGCGGGCGCTaGCGGGAAGGAAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPARCGR*REGRQE
Trigger: TTCTTGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGC...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp CCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAAGGCCCGCTGCGGGCGCTaGCGGGAAGGAAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: PASTCKWPAAGAAGKEDKARCGR*REGRQE
Trigger: TTCTTGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGC...CTTGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAGTTGGTGACGGTGGCTaGTGGCCGCGGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGVGDGG*WPRGPC
Trigger: ACAGGGGCCCCGCGGCCACCAGCCACCGTCACCAAC...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AGCAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTGCCAGCCTCGACGTGTCCATCTGGTGGGTTTaGCAGGTGTGTCCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SRQTLQWPPSAPGASLDVSIWWV*QVCPLV
Trigger: CACCAGGGGACACACCTGCCAAACCCACCAGATGGA...CACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCGGCCCCTCCATCTGGTaGGTTTGGCAGGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTGPSIW*VWQVCP
Trigger: GGGACACACCTGCCAAACCCACCAGATGGAGGGGCC...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp CCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAAGCTGGCCTGGCGAGGCTaGCGCTTCCTTCGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PASTCKWPAAGAAGKEDKLAWRG*RFLRGR
Trigger: TCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAG...CTTGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCCGTGGCCCCGCTCTCTaGACCCTCAGTGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPRGPAL*TLSGKK
Trigger: CTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACG...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CCA 90 bp CCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGACGTGGGTGACACGTaGCCCCGCTCTCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: PETREGPSIWWVWQVCPLDVGDT*PRSLDP
Trigger: AGGGTCCAGAGAGCGGGGCCACGTGTCACCCACGTC...CAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCGACCAAGCGCAGACGTaGGTGACACGTGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: VARDQGGPLHLVGLAGVSDQAQT*VTRGPA
Trigger: AGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTC...GGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp AGCAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTGCCAGCCTCGACGTGTCACGCAGGAGGAGTTaGGACCACGCTGCATCAGAG +
Preference number: 4 (lower is better)
Translates to: SRQTLQWPPSAPGASLDVSRRRS*DHAASE
Trigger: CTCTGATGCAGCGTGGTCCCAACTCCTCCTGCGTGA...CACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGAGCTGGTGACACCTCGTaGGGCCACAGGGAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGAGDTS*GHREGR
Trigger: CCGACCTTCCCTGTGGCCCCACGAGGTGTCACCAGC...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGAGCCTCCGGAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: EAGASFVADATCSWLAGKSLRSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTCCGGAGGCT...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp CAGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGAAGTGCTCCACCTCTaGCATGTCCACGTCGCCACG +
Preference number: 4 (lower is better)
Translates to: QVPASTCKWPAAGAAGKEEVLHL*HVHVAT
Trigger: CGTGGCGACGTGGACATGTCAGAGGTGGAGCACTTC...TTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp TTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTAGGACACCGCGTTGGTaGCGGTGGCTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: FVADATCSWLAGKRWPSFRTPRW*RWLVAA
Trigger: CGCGGCCACCAGCCACCGTCACCAACGCGGTGTCCT...AAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp CCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCGGAAGACTCGCATCTTaGTGGAGCCCACGATCTCGC +
Preference number: 4 (lower is better)
Translates to: PCWPGEAGASFVADATCSGRLAS*WSPRSR
Trigger: GCGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCC...GCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp ACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCACGTTGTTGGCTGTTaGCCGCCGCTTGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: TTPLLAWRGWRFLRGRCHHVVGC*PPLELA
Trigger: AGCCAGTTCAAGCGGCGGTCAACAGCCAACAACGTG...GTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCCACGTTGTTGGCTGTTaGCCGCCGCTTGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALHVVGC*PPLELA
Trigger: AGCCAGTTCAAGCGGCGGTCAACAGCCAACAACGTG...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR TCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTCCCCACCGTCGTCTTaGACTTGGGTGAGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALSPPSS*TWVSRH
Trigger: ATGCCGACTCACCCAAGTTCAAGACGACGGTGGGGA...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR TCA 90 bp CCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCGGAAGACAAGAAGGGTaGGGGCTCGTCCTCACCAAG +
Preference number: 4 (lower is better)
Translates to: PCWPGEAGASFVADATCSGRQEG*GLVLTK
Trigger: CTTGGTGAGGACGAGCCCTCACCCTTCTTGTCTTCC...GCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp GCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAACAGGGTGGGGACAGTaGCAGCCCACACTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: ARLALPSWQMPPAAGWLATGWGQ*QPTLEL
Trigger: TAGCTCCAGTGTGGGCTGTCACTGTCCCCACCCTGT...TGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTAGCGACGGTGGGGACTaGTGGGCGTTGAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PSWQMPPAAGWLASVGQASDGGD*WALSKA
Trigger: GGCCTTGCTCAACGCCCAGCAGTCCCCACCGTCGCT...AGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp CCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTGGCGCAGCTCGGGCATaGCCGAGAGGAAGACTCGCA +
Preference number: 4 (lower is better)
Translates to: PSWQMPPAAGWLASVGQAGAARA*PRGRLA
Trigger: TGCGAGTCTTCCTCTCGGGCATGCCCGAGCTGCGCC...AGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCGAGCGCGCCAGGTaGCAGCCTCGACGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVPERAR*QPRRVN
Trigger: ATTTACACGTCGAGGCTGGCACCTGGCGCGCTCGGG...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp AGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGATGAAGGCAAGAGGGTaGTGGCCAGGCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: RCQPRRVNGPLRALPGRKMKARG*WPGRAI
Trigger: GATGGCCCTGCCTGGCCAGCACCCTCTTGCCTTCAT...CTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCGCCCAAAGTCCTATCTaGCACCTGGCCCCCAAACCT +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALAQSPI*HLAPKP
Trigger: AGGTTTGGGGGCCAGGTGGCAGATAGGACTTTGGGC...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGGATGGGGCTTCACCATaGTGGCCATGCTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: PLLAWRGWRFLRGRCHLQDGASP*WPCWSR
Trigger: TCGAGACCAGCATGGCCAGCATGGTGAAGCCCCATC...CTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp ACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACTTGCCCAGGCTGGAGTaGAGGTGGTATGATCTCGGC +
Preference number: 4 (lower is better)
Translates to: TTPLLAWRGWRFLRGRCHLPRLE*RWYDLG
Trigger: GCCGAGATCATACCACCTGCACTCCAGCCTGGGCAA...GTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCCATCGTGCCACTGACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPHRATD*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTCAGTGGCACGATG...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGGACGGTGGGGACTGCTaGGCGTTGAGCAAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KWQQNDAPAGLARLALPSDGGDC*ALSKAG
Trigger: CCCGGCCTTGCTCAACGCCCAGCAGTCCCCACCGTC...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCGGCCCCTCCATCTGGTaGGTTTGGCAGGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVGPSIW*VWQVCP
Trigger: GGGACACACCTGCCAAACCCACCAGATGGAGGGGCC...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGGCCCCTCCATCTGGTaGGTTTGGCAGGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PETREGPSIWWVWQVCPLGPSIW*VWQVCP
Trigger: GGGACACACCTGCCAAACCCACCAGATGGAGGGGCC...CAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCCTGCAGCTGGCTGGCTaGCAAGCGTTGGCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTLQLAG*QALAKL
Trigger: AAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAG...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGCCACCTGCAGCTGGCTaGCTGGCAAGCGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWPPAAG*LASVGQ
Trigger: TTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGG...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCCACCTGCAGCTGGCTaGCTGGCAAGCGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: EAGASFVADATCSWLAGKPPAAG*LASVGQ
Trigger: TTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGG...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp TGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAGATGCCACCTGCAGCTaGCTGGCTGGCAAGCGTTGG +
Preference number: 4 (lower is better)
Translates to: CQPRRVNGPLRALPGRKTDATCS*LAGKRW
Trigger: CCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATC...TGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCACTGGCGCTTCCTTCGTaGCAGATGCCACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ARLALPSWQMPPAAGWLALALPS*QMPPAA
Trigger: AGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAG...TGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAATGCCTTCAGGGCTTTaGTCTGAGGCCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ARLALPSWQMPPAAGWLAMPSGL*SEAWAG
Trigger: CCCAGCCCAGGCCTCAGACCAAAGCCCTGAAGGCAT...TGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCCCATGTTGGCCAGGTTaGTCTCGGACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PCWPGEAGASFVADATCSPCWPG*SRTPDL
Trigger: GAGGTCAGGAGTCCGAGACCAACCTGGCCAACATGG...GCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp ACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACAGTCTCCCAAGTAGCTaGGAACACAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: TTPLLAWRGWRFLRGRCHSLPSS*EHRCPP
Trigger: TGGCGGGCACCTGTGTTCCCAGCTACTTGGGAGACT...GTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCCTGCCACTAGCACTTTaGGAGGCCAGTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTLPLAL*EASGGG
Trigger: TCCACCCCCACTGGCCTCCCAAAGTGCTAGTGGCAG...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCGAAGTGCTCCACCTCTaGCATGTCCACGTCGCCACG +
Preference number: 4 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVEVLHL*HVHVAT
Trigger: CGTGGCGACGTGGACATGTCAGAGGTGGAGCACTTC...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR TCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCAGCTTGTGGCCTTCCTaGGTGATGTACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALSLWPS*VMYSCR
Trigger: CCTGCAGGAGTACATCACTCAGGAAGGCCACAAGCT...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGAGGACCTTGTCGTTaGGGCCCAGGCGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGRGPCR*GPGAAR
Trigger: CCGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCT...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGAGAGGACCTTGTCGTTaGGGCCCAGGCGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRRGPCR*GPGAAR
Trigger: CCGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCT...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCCGTCTTGAACTTGGGTaGGTCGGCATCATTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALRLELG*VGIIGH
Trigger: GTGCCCAATGATGCCGACTCACCCAAGTTCAAGACG...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR TCA 90 bp CCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTCGCCCGGGAAGGACTTaGTGGACCACACGATCTCGC +
Preference number: 4 (lower is better)
Translates to: PSWQMPPAAGWLASVGQARPGRT*WTTRSR
Trigger: GCGAGATCGTGTGGTCCATCAAGTCCTTCCCGGGCG...AGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp ACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGTGGGAAAGGGGCTTCTaGGACGAGTGTCGACGGCAG +
Preference number: 4 (lower is better)
Translates to: TREGPSIWWVWQVCPLVLWERGF*DECRRQ
Trigger: CTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCA...CAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCACTGATCTGGCTGAGTaGCAGCATCTCGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALTDLAE*QHLVTQ
Trigger: CTGGGTCACGAGATGCTGTCACTCAGCCAGATCAGT...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCCAGTGGGAAAAAGTCTaGGGCTGGCGTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALQWEKV*GWRLSP
Trigger: TGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTG...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR TCA 90 bp CAGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAACTGGGGCAGCGTCATTaGCTGAGATGGGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: QVPASTCKWPAAGAAGKELGQRH*LRWGRP
Trigger: AGGTCTTCCCCATCTCAGTCAATGACGCTGCCCCAG...TTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCACTGATCTGGCTGAGTaGCAGCATCTGGATGCCGGA +
Preference number: 4 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPTDLAE*QHLDAG
Trigger: TCCGGCATCCAGATGCTGTCACTCAGCCAGATCAGT...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586543.1
CDS-3UTR GCA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGGGCGCAGCTCGGGCATaGCCGAGAGGAAGACTCGCA +
Preference number: 4 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRGAARA*PRGRLA
Trigger: TGCGAGTCTTCCTCTCGGGCATGCCCGAGCTGCGCC...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCCAGCTCCACGGATTTaGTTTTGCCGCGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: EAGASFVADATCSWLAGKPAPRI*FCRGPC
Trigger: ACACGGGCCGCGGCAAAAGCAAATCCGTGGAGCTGG...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp TTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTCCCCGTGGGCCAGGATaGGCGACAGCATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: FVADATCSWLAGKRWPSFPRGPG*ATASPP
Trigger: AGGAGGGGATGCTGTCGCCCATCCTGGCCCACGGGG...AAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp TGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAGGTGACGGTGGCTGGTaGCCGCGGGGCCCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: CSWLAGKRWPSFLVPGSSGDGGW*PRGPCF
Trigger: GAAACAGGGGCCCCGCGGCCACCAGCCACCGTCACC...TGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACGGTGACGGTGGCTGGTaGCCGCGGGGCCCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QLAGWQALAKLFGTWELNGDGGW*PRGPCF
Trigger: GAAACAGGGGCCCCGCGGCCACCAGCCACCGTCACC...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCTACTCGATGCGGCTGTaGGAGTGCTTCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPYSMRL*ECFSIT
Trigger: GGTGATCGAGAAGCACTCCCACAGCCGCATCGAGTA...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CCA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGGCAGAGCAGATGGCCTaGGGAAGGCAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRAEQMA*GRQGSL
Trigger: CAGGGACCCCTGCCTTCCCCAGGCCATCTGCTCTGC...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCACCACCTGCAGCTGGCTaGCTGGCAAGCGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: ASFVADATCSWLAGKRWPPPAAG*LASVGQ
Trigger: TTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGG...TGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGCTGGCGCTTCCTTCGTaGCAGATGCCACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWLALPS*QMPPAA
Trigger: AGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAG...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGCTGGCCTGGCGAGGCTaGCGCTTCCTTCGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRLAWRG*RFLRGR
Trigger: TCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAG...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp TGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCGAGTGCCGTAGGACGTaGGTGGGACATGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: WPETREGPSIWWVWQVCPECRRT*VGHGDS
Trigger: ACTGTCCCCATGTCCCACCCACGTCCTACGGCACTC...GGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGAGAGTGCCGTAGGACGTaGGTGGGACATGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGECRRT*VGHGDS
Trigger: ACTGTCCCCATGTCCCACCCACGTCCTACGGCACTC...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCCCCCACCTCCCCTGGTaGGTCAATACTGATCTGGCT +
Preference number: 4 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTPHLPW*VNTDLA
Trigger: AGCCAGATCAGTATTGACCCACCAGGGGAGGTGGGG...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CCA 90 bp GCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAGTCCTATCTGCCACCTaGCCCCCAAACCTAAACCCG +
Preference number: 4 (lower is better)
Translates to: ARLALPSWQMPPAAGWLAVLSAT*PPNLNP
Trigger: CGGGTTTAGGTTTGGGGGCCAGGTGGCAGATAGGAC...TGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCAGCCTCCTGAGTAGCTaGGATTTACAGGCGTGTGCC +
Preference number: 4 (lower is better)
Translates to: AGLARLALPSWQMPPAAGSLLSS*DLQACA
Trigger: GGCACACGCCTGTAAATCCCAGCTACTCAGGAGGCT...GCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp GGGCTTTGGTCTGAGGCCTGGGCTGGGGCAGCGTCATaGACTGAGATGGGGAAGACCTACGTGGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLWSEAWAGAAS*TEMGKTYVGGR
Trigger: CCTTCCGCCCACGTAGGTCTTCCCCATCTCAGTCAATGACGCTGCCCCAGCCCAGGCCTCAGACCAAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp TGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAGGTAGTTCCGGCAGATaGGCACCTTGCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CQPRRVNGPLRALPGRKTGSSGR*APCPSG
Trigger: ACCTGAAGGGCAAGGTGCTCATCTGCCGGAACTACC...TGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp AGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCAGGAAGACTCGCATCTTaGTGGAGCCCACGATCTCGC +
Preference number: 4 (lower is better)
Translates to: REGPSIWWVWQVCPLVLPGRLAS*WSPRSR
Trigger: GCGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCC...TGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCACTGGCTTTTGGCCTTaGTCATGTACTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPTGFWP*SCTRCG
Trigger: GCCGCATCGAGTACATGATCAAGGCCAAAAGCCAGT...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR TCA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGACACGTTGTTGGCTGTTaGCCGCCGCTTGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGHVVGC*PPLELA
Trigger: AGCCAGTTCAAGCGGCGGTCAACAGCCAACAACGTG...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCACGTTGTTGGCTGTTaGCCGCCGCTTGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: VARDQGGPLHLVGLAGVSHVVGC*PPLELA
Trigger: AGCCAGTTCAAGCGGCGGTCAACAGCCAACAACGTG...GGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp TGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACATCCCCACCGTCGTCTTaGACTTGGGTGAGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: CQPRRVNGPLRALPGRKTSPPSS*TWVSRH
Trigger: ATGCCGACTCACCCAAGTTCAAGACGACGGTGGGGA...TGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp ACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGTCCCCACCGTCGTCTTaGACTTGGGTGAGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: TREGPSIWWVWQVCPLVLSPPSS*TWVSRH
Trigger: ATGCCGACTCACCCAAGTTCAAGACGACGGTGGGGA...CAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp AGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGGGCAGGAGAATTGCTTaGACCCAGAAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RCQPRRVNGPLRALPGRKGRRIA*TQKAEV
Trigger: AACCTCCGCCTTCTGGGTTCAAGCAATTCTCCTGCC...CTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCACTCCTTGCCGCCCTTaGTCATGTACTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: VARDQGGPLHLVGLAGVSTPCRP*SCTRCG
Trigger: GCCGCATCGAGTACATGATCAAGGGCGGCAAGGAGT...GGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429941.6
CDS-3UTR GCA 90 bp CCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCAGCGACGGTGGGGACTaGTGGGCGTTGAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PSVGKSLRLASLTKPHLPSDGGD*WALSKA
Trigger: GGCCTTGCTCAACGCCCAGCAGTCCCCACCGTCGCT...GGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp GCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCAGGATGGGCATGAAGTaGTCCACCTCTGACATGTCC +
Preference number: 4 (lower is better)
Translates to: AGLARLALPSWQMPPAAGRMGMK*STSDMS
Trigger: GGACATGTCAGAGGTGGAGCACTTCATGCCCATCCT...GCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACGGCCGGGGTGTTGGCTaGGACAGCCCCTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: QLAGWQALAKLFGTWELNGRGVG*DSPSLG
Trigger: ACCCAGTGAGGGGCTGTCGCAGCCAACACCCCGGCC...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp TGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGAGGTGTGTCCCCTGGTaGTGCCACCAGGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: WQMPPAAGWLASVGQAFWRCVPW*CHQEPR
Trigger: TCGGGGCTCCTGGTGGCAGCACCAGGGGACACACCT...CCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGGTGGCAGATGCCACCTaGAGCTGGCTGGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: KWQQNDAPAGLARLALPSVADAT*SWLAGK
Trigger: CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCAC...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp AGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACAAGTGCTTCCTGAGTaGCGTAGGACGTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: REGPSIWWVWQVCPLVLPQVLPE*RRTWVG
Trigger: TCCCACCCACGTCCTACGGCACTCAGGAAGCACTTG...TGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACGACGGTGGGGACTGCTaGGCGTTGAGCAAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QLAGWQALAKLFGTWELNDGGDC*ALSKAG
Trigger: CCCGGCCTTGCTCAACGCCCAGCAGTCCCCACCGTC...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCTTGGGCACGGGAATGTaGATCTCCACGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPLGTGM*ISTLLA
Trigger: AGCCAACAACGTGGAGATCCACATTCCCGTGCCCAA...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CCA 90 bp CCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGTTGGGCACGGGAATGTaGATCTCCACGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLLAWRGWRFLRGRCHLQLGTGM*ISTLLA
Trigger: AGCCAACAACGTGGAGATCCACATTCCCGTGCCCAA...CTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACCCGAGGCCGGGGTGTTaGCTGCGACAGCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: QLAGWQALAKLFGTWELNPRPGC*LRQPLT
Trigger: AGTGAGGGGCTGTCGCAGCCAACACCCCGGCCTCGG...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCTGGTGGGTCAATACTGATGGCAGGTGTGTCCCCTaGTGCTGCCACCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LRLASLTKPHLPWWVNTDGRCVP*CCHQEP
Trigger: GGGCTCCTGGTGGCAGCACCAGGGGACACACCTGCC...ATCAGTATTGACCCACCAGGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGATCCATCTGGTGGGTTTaGCAGGTGTGTCCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGSIWWV*QVCPLV
Trigger: CACCAGGGGACACACCTGCCAAACCCACCAGATGGA...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp TGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCTCCATCTGGTGGGTTTaGCAGGTGTGTCCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: WPETREGPSIWWVWQVCPSIWWV*QVCPLV
Trigger: CACCAGGGGACACACCTGCCAAACCCACCAGATGGA...GGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp ACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGTCCATCTGGTGGGTTTaGCAGGTGTGTCCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TREGPSIWWVWQVCPLVLSIWWV*QVCPLV
Trigger: CACCAGGGGACACACCTGCCAAACCCACCAGATGGA...CAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp TGGGTGACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTCTGGCCTGGCGAGGCTaGCGCTTCCTTCGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: WVTRGPALWTLSGKKSEALAWRG*RFLRGR
Trigger: TCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAG...AGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp TGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACGCCCCTGCTGGCCTaGCGAGGCTGGCGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CSWLAGKRWPSFLVPGSSTPLLA*RGWRFL
Trigger: AAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGT...TGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACACGCCCCTGCTGGCCTaGCGAGGCTGGCGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QLAGWQALAKLFGTWELNTPLLA*RGWRFL
Trigger: AAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGT...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCAAACCCCACCTCCCCTaGTGGGTCAATACTGATCTG +
Preference number: 4 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPKPHLP*WVNTDL
Trigger: CAGATCAGTATTGACCCACCAGGGGAGGTGGGGTTT...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CCA 90 bp CCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAAGGTGGGGACAAGCTGTTaGCCATCTGAGGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PASTCKWPAAGAAGKEDKVGTSC*PSEGAA
Trigger: TGCTGCACCCTCAGATGGCCAACAGCTTGTCCCCAC...CTTGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTAGGGGCCATGAGGGCTaGCTGCTGATATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PSWQMPPAAGWLASVGQARGHEG*LLIWVW
Trigger: CCACACCCATATCAGCAGCCAGCCCTCATGGCCCCT...AGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGACCATCAGGATGGGCATaGAGTGCTCCACCTCTGACA +
Preference number: 4 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGPSGWA*SAPPLT
Trigger: TGTCAGAGGTGGAGCACTTCATGCCCATCCTGATGG...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR TCA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTAGCTTGTGGCCTTCCTaGGTGATGTACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPSLWPS*VMYSCR
Trigger: CCTGCAGGAGTACATCACTCAGGAAGGCCACAAGCT...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGAAGCTTGTGGCCTTCCTaGGTGATGTACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGSLWPS*VMYSCR
Trigger: CCTGCAGGAGTACATCACTCAGGAAGGCCACAAGCT...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp AGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCAAGCTTGTGGCCTTCCTaGGTGATGTACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: REGPSIWWVWQVCPLVLPSLWPS*VMYSCR
Trigger: CCTGCAGGAGTACATCACTCAGGAAGGCCACAAGCT...TGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGCATTCTTCCGATACTTaGTGCCTTCGGACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWHSSDT*CLRTAR
Trigger: CCTGGCGGTCCGAAGGCATCAAGTATCGGAAGAATG...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp CCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAAGCAGTGGGAAAAAGTCTaGGGCTGGCGTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: PASTCKWPAAGAAGKEDKQWEKV*GWRLSP
Trigger: TGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTG...CTTGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGCAGTGGGAAAAAGTCTaGGGCTGGCGTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWQWEKV*GWRLSP
Trigger: TGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTG...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGATTGGTCTCGGACTCCTaGCCTCAGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGLVSDS*PQVIHP
Trigger: CGGGTGGATCACCTGAGGTCAGGAGTCCGAGACCAA...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGGAGGCCAAGGCAGGATaGTGGCTCAAGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KWQQNDAPAGLARLALPSEAKAG*WLKPRS
Trigger: ACTCCTGGGCTTGAGCCATCATCCTGCCTTGGCCTC...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCACTCCTGACCTAAAATaGTCTGGCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVTPDLK*SGRLSL
Trigger: GAGGCTGAGGCGGCCAGATCATTTTAGGTCAGGAGT...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp CCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTAGCAGGCAGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: PSWQMPPAAGWLASVGQASRQIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCTGCCTGCT...AGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp ACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGATGCAGAGGTTGCAGTaGGCAAAGACCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: TREGPSIWWVWQVCPLVLMQRLQ*AKTAPL
Trigger: CAATGGCGCGGTCTTTGCTCACTGCAACCTCTGCAT...CAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp ACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACGGATTTGCTTTTaGCGCGGCCCGTGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: TREGPSIWWVWQVCPLVLPRICF*RGPCCQ
Trigger: TTGACAACACGGGCCGCGGCAAAAGCAAATCCGTGG...CAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGACCAGCTCCACGGATTTaGTTTTGCCGCGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGPAPRI*FCRGPC
Trigger: ACACGGGCCGCGGCAAAAGCAAATCCGTGGAGCTGG...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp TGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAAGGTGTGTCCCCTGGTaGTGCCACCAGGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: CSWLAGKRWPSFLVPGSSRCVPW*CHQEPR
Trigger: TCGGGGCTCCTGGTGGCAGCACCAGGGGACACACCT...TGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAGATGAGAGAAGACTCTaGCTCTGTGGCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ARLALPSWQMPPAAGWLADERRL*LCGLLC
Trigger: ACAGAGGAGGCCACAGAGGCAGAGTCTTCTCTCATC...TGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCGCAAGAGTACAACGGTaGCATCTTGACTCACTGCGA +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALARVQR*HLDSLR
Trigger: TCGCAGTGAGTCAAGATGGCACCGTTGTACTCTTGC...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CAGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAATCACCCAACCTGGAGTaGAGTGGTGCAATCACAGCT +
Preference number: 4 (lower is better)
Translates to: QVPASTCKWPAAGAAGKESPNLE*SGAITA
Trigger: AGCTGTGATTGCACCACTGCACTCCAGGTTGGGTGA...TTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp TGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCACACCCTCAGTACCTTaGCCTTCAGGTCCAGCACGT +
Preference number: 4 (lower is better)
Translates to: WPETREGPSIWWVWQVCPTPSVP*PSGPAR
Trigger: ACGTGCTGGACCTGAAGGGCAAGGTACTGAGGGTGT...GGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590756.5
CDS-3UTR CCA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCGACCGCCGCTTGAACTaGCTTTTGGCCTTGATCATG +
Preference number: 4 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTDRRLN*LLALIM
Trigger: CATGATCAAGGCCAAAAGCCAGTTCAAGCGGCGGTC...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CCA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCGTGAGTCGGCATCATTaGGCACGGGAATGTGGATCT +
Preference number: 4 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTVSRHH*ARECGS
Trigger: AGATCCACATTCCCGTGCCCAATGATGCCGACTCAC...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CCA 90 bp CCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGAGGCTGGAGTGCAGGTaGTATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PETREGPSIWWVWQVCPLRLECR*YDLGSL
Trigger: CAGTGAGCCGAGATCATACCACCTGCACTCCAGCCT...CAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCCTGAGTGACAGCATCTaGATGCCGGAGGTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTLSDSI*MPEVVK
Trigger: CTTCACTACCTCCGGCATCCAGATGCTGTCACTCAG...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586543.1
CDS-3UTR CCA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGGGTCAATACTGATCTaGCTGAGTGACAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPGSILI*LSDSIW
Trigger: CCAGATGCTGTCACTCAGCCAGATCAGTATTGACCC...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586543.1
CDS-3UTR TCA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGACTGGCTTTTGGCCTTaGTCATGTACTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWTGFWP*SCTRCG
Trigger: GCCGCATCGAGTACATGATCAAGGCCAAAAGCCAGT...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTCCCCACCGTCGTCTTaGACTTGGGTGAGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: KWQQNDAPAGLARLALPSSPPSS*TWVSRH
Trigger: ATGCCGACTCACCCAAGTTCAAGACGACGGTGGGGA...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAATCTCCATTCTGCGTaGTATAACGCACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ARLALPSWQMPPAAGWLANLHSA*YNAPRA
Trigger: TGCCCTGGGTGCGTTATATCACGCAGAATGGAGATT...TGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTTGGGAAAGGGGCTTCTaGGACGAGTGTCGACGGCAG +
Preference number: 4 (lower is better)
Translates to: GRCHLQLAGWQALAKLFGWERGF*DECRRQ
Trigger: CTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCA...ACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCAAGCTGTTGGCCATCTaGGGGTGCAGCAGATTGGAT +
Preference number: 4 (lower is better)
Translates to: VARDQGGPLHLVGLAGVSKLLAI*GCSRLD
Trigger: ATCCAATCTGCTGCACCCTCAGATGGCCAACAGCTT...GGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp TGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCCCAACTCAGCCTCCTaGGTAGTTTGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: WPETREGPSIWWVWQVCPPNSAS*VVWTTG
Trigger: ACCTGTAGTCCAAACTACTCAGGAGGCTGAGTTGGG...GGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGAGGATGGGCATGAAGTaGTCCACCTCTGACATGTCC +
Preference number: 4 (lower is better)
Translates to: EAGASFVADATCSWLAGKRMGMK*STSDMS
Trigger: GGACATGTCAGAGGTGGAGCACTTCATGCCCATCCT...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGAGGATGGGCATGAAGTaGTCCACCTCTGACATGTCC +
Preference number: 4 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWRMGMK*STSDMS
Trigger: GGACATGTCAGAGGTGGAGCACTTCATGCCCATCCT...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR GCA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGCCAGAAGGCGGAGGTTaGAGTGAGCCGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRPEGGG*SEPRSH
Trigger: GTGTGATCTCGGCTCACTGCAACCTCCGCCTTCTGG...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp AGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGATGAGGCAGGAGAATTaGTTGAACCCAGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RCQPRRVNGPLRALPGRKMRQEN*LNPEGG
Trigger: TCCGCCTTCTGGGTTCAAGCAATTCTCCTGCCTCAT...CTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCATCACTTGAGCCCAAGTaGAAGACCAGCCTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: ASFVADATCSWLAGKRWPSLEPK*KTSLGN
Trigger: GTTGCCCAGGCTGGTCTTGCACTTGGGCTCAAGTGA...TGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGGATAGCCGCACACACTaGTGGAACTTCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWDSRTH*WNFTSS
Trigger: GGAGGATGTGAAGTTCCACCAGTGTGTGCGGCTATC...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp ACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGGACCGCCGCTTGAACTaGCTTTTGGCCTTGATCATG +
Preference number: 4 (lower is better)
Translates to: TREGPSIWWVWQVCPLVLDRRLN*LLALIM
Trigger: CATGATCAAGGCCAAAAGCCAGTTCAAGCGGCGGTC...CAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp TGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCTTGGGCACGGGAATGTaGATCTCCACGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: WPETREGPSIWWVWQVCPLGTGM*ISTLLA
Trigger: AGCCAACAACGTGGAGATCCACATTCCCGTGCCCAA...GGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTTTGGGCACGGGAATGTaGATCTCCACGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPLGTGM*ISTLLA
Trigger: AGCCAACAACGTGGAGATCCACATTCCCGTGCCCAA...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCGTGAGTCGGCATCATTaGGCACGGGAATGTGGATCT +
Preference number: 4 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVVSRHH*ARECGS
Trigger: AGATCCACATTCCCGTGCCCAATGATGCCGACTCAC...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCGTTGGCCAAGCTTTTTaGTACCTGGGAGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: GNKTTPLLAWRGWRFLRGVGQAF*YLGAQQ
Trigger: CTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAAC...GCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACTGGCTGGCAAGCGTTaGCCAAGCTTTTTGGTACCT +
Preference number: 4 (lower is better)
Translates to: REGPSIWWVWQVCPLVLPLAGKR*PSFLVP
Trigger: AGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAG...TGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp TGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACACTGGCTGGCAAGCGTTaGCCAAGCTTTTTGGTACCT +
Preference number: 4 (lower is better)
Translates to: CQPRRVNGPLRALPGRKTLAGKR*PSFLVP
Trigger: AGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAG...TGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGCTGGCTGGCAAGCGTTaGCCAAGCTTTTTGGTACCT +
Preference number: 4 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWLAGKR*PSFLVP
Trigger: AGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAG...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCCTGGCGCTTCCTTCGTaGCAGATGCCACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSVGKSLRLASLTKPHLPLALPS*QMPPAA
Trigger: AGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAG...GGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGCCCCACCTCCCCTGGTaGGTCAATACTGATCTGGCT +
Preference number: 4 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRPHLPW*VNTDLA
Trigger: AGCCAGATCAGTATTGACCCACCAGGGGAGGTGGGG...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp ACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCAGTGGGCCATCAGTTTaGGGAGAGGTGGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: TRGPALWTLSGKKSEAGVSGPSV*GEVGTS
Trigger: GCTTGTCCCCACCTCTCCCCAAACTGATGGCCCACT...GACGCCAGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCTCACTTTGCCCAAGCTaGAGTACAGTGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: VARDQGGPLHLVGLAGVSSLCPS*STVARS
Trigger: AGATCGCGCCACTGTACTCCAGCTTGGGCAAAGTGA...GGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp GGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTaGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: GRCHLQLAGWQA*AKLFGTWELNS
Trigger: GCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGCCATCAGGATGGGCATaGAGTGCTCCACCTCTGACA +
Preference number: 4 (lower is better)
Translates to: KWQQNDAPAGLARLALPSPSGWA*SAPPLT
Trigger: TGTCAGAGGTGGAGCACTTCATGCCCATCCTGATGG...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp TGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGGGAAGACTCGCATCTTaGTGGAGCCCACGATCTCGC +
Preference number: 4 (lower is better)
Translates to: WQMPPAAGWLASVGQAFWGRLAS*WSPRSR
Trigger: GCGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCC...CCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGCGTCTTGAACTTGGGTaGGTCGGCATCATTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRRLELG*VGIIGH
Trigger: GTGCCCAATGATGCCGACTCACCCAAGTTCAAGACG...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp TGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAAGAAACGAGACTTCTTaGAGACCAGCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CQPRRVNGPLRALPGRKTRNETS*RPASSG
Trigger: CCCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCT...TGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp ACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCACTGATCTGGCTGAGTaGCAGCATCTCGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: TRGPALWTLSGKKSEAGVTDLAE*QHLVTQ
Trigger: CTGGGTCACGAGATGCTGTCACTCAGCCAGATCAGT...GACGCCAGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGACCACGGATTTGCTTTTaGCGCGGCCCGTGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGPRICF*RGPCCQ
Trigger: TTGACAACACGGGCCGCGGCAAAAGCAAATCCGTGG...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp ACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCCCACGGATTTGCTTTTaGCGCGGCCCGTGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: TRGPALWTLSGKKSEAGVPRICF*RGPCCQ
Trigger: TTGACAACACGGGCCGCGGCAAAAGCAAATCCGTGG...GACGCCAGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp TGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCATTCCTTCGTGGCAGATaGCACCTGCAGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CSWLAGKRWPSFLVPGSSFLRGR*HLQLAG
Trigger: GCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAA...TGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp CCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCCAAGTGCTTCCTGAGTaGCGTAGGACGTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PSVGKSLRLASLTKPHLPQVLPE*RRTWVG
Trigger: TCCCACCCACGTCCTACGGCACTCAGGAAGCACTTG...GGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp TGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGGAGTTGGGACCACGCTaGATCAGAGGAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WQMPPAAGWLASVGQAFWELGPR*IRGRLW
Trigger: CCACAGCCTTCCTCTGATGCAGCGTGGTCCCAACTC...CCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGGGACACAGGGGATGCTaGTGTGGACACAAGGACCAT +
Preference number: 4 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRGHRGC*CGHKDH
Trigger: ATGGTCCTTGTGTCCACAGCAGCATCCCCTGTGTCC...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAGCAGGCAGCACTTCCTaGATATGTGCTATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: ASFVADATCSWLAGKRWPAGSTS*ICAISP
Trigger: GGGGGAAATAGCACATATGCAGGAAGTGCTGCCTGC...TGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGCCGAGATTTCGCCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: KWQQNDAPAGLARLALPSPRFRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGGCGAAATCTCGG...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGGTTGGTGACGGTGGCTaGTGGCCGCGGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLVGDGG*WPRGPC
Trigger: ACAGGGGCCCCGCGGCCACCAGCCACCGTCACCAAC...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTGATAGCCGCACACACTaGTGGAACTTCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: PSWQMPPAAGWLASVGQADSRTH*WNFTSS
Trigger: GGAGGATGTGAAGTTCCACCAGTGTGTGCGGCTATC...AGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTGTGAGTCGGCATCATTaGGCACGGGAATGTGGATCT +
Preference number: 4 (lower is better)
Translates to: PSWQMPPAAGWLASVGQAVSRHH*ARECGS
Trigger: AGATCCACATTCCCGTGCCCAATGATGCCGACTCAC...AGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGGTTGGCCAAGCTTTTTaGTACCTGGGAGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWVGQAF*YLGAQQ
Trigger: CTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAAC...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp TGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCACTGCAGCTGGCTGGCTaGCAAGCGTTGGCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: CSWLAGKRWPSFLVPGSSLQLAG*QALAKL
Trigger: AAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAG...TGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGGGGTCAATACTGATCTaGCTGAGTGACAGCATCTCG +
Preference number: 4 (lower is better)
Translates to: EAGASFVADATCSWLAGKGSILI*LSDSIS
Trigger: CGAGATGCTGTCACTCAGCCAGATCAGTATTGACCC...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp TGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAGGGTCAATACTGATCTaGCTGAGTGACAGCATCTCG +
Preference number: 4 (lower is better)
Translates to: CQPRRVNGPLRALPGRKTGSILI*LSDSIS
Trigger: CGAGATGCTGTCACTCAGCCAGATCAGTATTGACCC...TGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp CTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCTGGTGGGTCAATACTGATCGTGGCCCCGCTCTCTaGACCCTCAGTGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: LRLASLTKPHLPWWVNTDRGPAL*TLSGKK
Trigger: CTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACG...ATCAGTATTGACCCACCAGGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGGGACCATGCTCTGAGTaGGCCATCAGTTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: KWQQNDAPAGLARLALPSGPCSE*AISLGR
Trigger: TCTCCCCAAACTGATGGCCCACTCAGAGCATGGTCC...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp TGGGTGACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTCTCTCTTCTGTCCTGTaGACCAGCCCTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: WVTRGPALWTLSGKKSEALSSVL*TSPLLS
Trigger: GGACAGGAGAGGGCTGGTCCACAGGACAGAAGAGAG...AGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp TGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCGCAGTAACACTATCTTaGCTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: WPETREGPSIWWVWQVCPAVTLS*LTATST
Trigger: GGTGGAGGTTGCAGTGAGCCAAGATAGTGTTACTGC...GGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCCACCCAACTGTTTTCTaGGTTCCTTTGAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALHPTVF*VPLKSQ
Trigger: CTGGCTTTTCAAAGGAACCCAGAAAACAGTTGGGTG...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGACTGGCTTTTGGCCTTaGTCATGTACTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRTGFWP*SCTRCG
Trigger: GCCGCATCGAGTACATGATCAAGGCCAAAAGCCAGT...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp TGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGCGTCTTGAACTTGGGTaGGTCGGCATCATTGGGCAC +
Preference number: 4 (lower is better)
Translates to: WQMPPAAGWLASVGQAFWRLELG*VGIIGH
Trigger: GTGCCCAATGATGCCGACTCACCCAAGTTCAAGACG...CCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAACCCACTCTTCTCAATaGTCTTCAGGTAGCGCACCT +
Preference number: 4 (lower is better)
Translates to: ASFVADATCSWLAGKRWPTHSSQ*SSGSAP
Trigger: AGGTGCGCTACCTGAAGATCATTGAGAAGAGTGGGT...TGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp CCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGAGCGTGGGGTCTAAATaGGTGGTGACTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PETREGPSIWWVWQVCPLSVGSK*VVTFSP
Trigger: AGGAGAAAAAGTCACCACTCATTTAGACCCCACGCT...CAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGGGCCGGGGTGTTGGCTaGGACAGCCCCTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLGRGVG*DSPSLG
Trigger: ACCCAGTGAGGGGCTGTCGCAGCCAACACCCCGGCC...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGGTGTGTCCCCTGGTaGTGCCACCAGGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQRCVPW*CHQEPR
Trigger: TCGGGGCTCCTGGTGGCAGCACCAGGGGACACACCT...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGGATAGCCGCACACACTaGTGGAACTTCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRDSRTH*WNFTSS
Trigger: GGAGGATGTGAAGTTCCACCAGTGTGTGCGGCTATC...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGCCGAGGCCGGGGTGTTaGCTGCGACAGCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLPRPGC*LRQPLT
Trigger: AGTGAGGGGCTGTCGCAGCCAACACCCCGGCCTCGG...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp ACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCCTACTTCCTTCGTCTTaGGCTCCTGTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TRGPALWTLSGKKSEAGVLLPSS*APVGLL
Trigger: AAGGAGACCCACAGGAGCCCAAGACGAAGGAAGTAG...GACGCCAGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTCAACCTCTGTCTCCCTaGTTCAAGCAATTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPQPLSP*FKQFCL
Trigger: CAGACAGAATTGCTTGAACCAGGGAGACAGAGGTTG...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACCAAGCTGGAGTACAGTaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QLAGWQALAKLFGTWELNQAGVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACTGTACTCCAGCTTG...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGATTCTGGGTGGAATTCTaGTCTCCCCGCACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGFWVEF*SPRTLG
Trigger: TCCCAAAGTGCGGGGAGACCAGAATTCCACCCAGAA...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTGGGACTGCTGGGCGTTaGGCAAGGCCGGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFGTAGR*ARPGAA
Trigger: GGCGGCGCCCGGCCTTGCTCAACGCCCAGCAGTCCC...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGAGGACACCGCGTTGGTaGCGGTGGCTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWRTPRW*RWLVAA
Trigger: CGCGGCCACCAGCCACCGTCACCAACGCGGTGTCCT...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACCGTCTTGAACTTGGGTaGGTCGGCATCATTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QLAGWQALAKLFGTWELNRLELG*VGIIGH
Trigger: GTGCCCAATGATGCCGACTCACCCAAGTTCAAGACG...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGAATCTCCATTCTGCGTaGTATAACGCACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KWQQNDAPAGLARLALPSNLHSA*YNAPRA
Trigger: TGCCCTGGGTGCGTTATATCACGCAGAATGGAGATT...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAACAGGCATAAGCCACTaGGCTAGGCCGGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGTGISH*ARPVFV
Trigger: AACAAAAACCGGCCTAGCGCAGTGGCTTATGCCTGT...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp AGCAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTGCCAGCCTCGACGTGAGTAATTTGAAGCCATaGTCTATCTTCGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: SRQTLQWPPSAPGASLDVSNLKP*SIFGLL
Trigger: CAAAAGTCCGAAGATAGAGCATGGCTTCAAATTACT...CACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTCGTTCTTCTTGGATGTaGCAACCAGATACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPRSSWM*QPDTGC
Trigger: ACAACCTGTATCTGGTTGCCACATCCAAGAAGAACG...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR CCA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACTACTCGATGCGGCTGTaGGAGTGCTTCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: QLAGWQALAKLFGTWELNYSMRL*ECFSIT
Trigger: GGTGATCGAGAAGCACTCCCACAGCCGCATCGAGTA...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp TGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCATACTCGATGCGGCTGTaGGAGTGCTTCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: CSWLAGKRWPSFLVPGSSYSMRL*ECFSIT
Trigger: GGTGATCGAGAAGCACTCCCACAGCCGCATCGAGTA...TGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCAAACCCCACCTCCCCTaGTGGGTCAATACTGATCTG +
Preference number: 4 (lower is better)
Translates to: PSVGKSLRLASLTKPHLPKPHLP*WVNTDL
Trigger: CAGATCAGTATTGACCCACCAGGGGAGGTGGGGTTT...GGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTGAGGGTGCAGCAGATTaGATGAGAGAAGACTCTGCC +
Preference number: 4 (lower is better)
Translates to: GRCHLQLAGWQALAKLFGEGAAD*MREDSA
Trigger: GGCAGAGTCTTCTCTCATCCAATCTGCTGCACCCTC...ACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCATTATATATAAATACGTaGCCCTCGTGGACTTTAGCC +
Preference number: 4 (lower is better)
Translates to: APAGLARLALPSWQMPPALYINT*PSWTLA
Trigger: GGCTAAAGTCCACGAGGGCCACGTATTTATATATAA...TGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp ACTGTGTCGCTCAGGCAAGAGTACAACGGTGCCATCTaGACTCACTGCGAGCGCCATCTCCCGGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: TVSLRQEYNGAI*THCERHLPGSS
Trigger: GCTTGAACCCGGGAGATGGCGCTCGCAGTGAGTCAAGATGGCACCGTTGTACTCTTGCCTGAGCGACACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGCGCCCGGGAAGGACTTaGTGGACCACACGATCTCGC +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLRPGRT*WTTRSR
Trigger: GCGAGATCGTGTGGTCCATCAAGTCCTTCCCGGGCG...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp TGGGTGACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTACCCACTCTTCTCAATaGTCTTCAGGTAGCGCACCT +
Preference number: 4 (lower is better)
Translates to: WVTRGPALWTLSGKKSEATHSSQ*SSGSAP
Trigger: AGGTGCGCTACCTGAAGATCATTGAGAAGAGTGGGT...AGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAATGCCCACTAGACACCTaGGGACGAGCTCGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQCPLDT*GRARQD
Trigger: GTCTTGCCGAGCTCGTCCTCAGGTGTCTAGTGGGCA...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGGATATGAGAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRDMRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTCATATC...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp CTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCTGGTGGGTCAATACTGATCTGGTCTCGAACTCCTaGGCTCAAGTGATTCACCTG +
Preference number: 4 (lower is better)
Translates to: LRLASLTKPHLPWWVNTDLVSNS*AQVIHL
Trigger: CAGGTGAATCACTTGAGCTCAGGAGTTCGAGACCAG...ATCAGTATTGACCCACCAGGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACGCCTCTTCCCGCAGCTaGTTTTCCTGTGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QMPPAAGWLASVGQAFWYASSRS*FSCVSA
Trigger: AGCTGAAACACAGGAAAAGCAGCTGCGGGAAGAGGC...GTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp TGGGTGACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTTCACCATCTTCCCGATaGCCAAAGTCCTATCTGCCA +
Preference number: 4 (lower is better)
Translates to: WVTRGPALWTLSGKKSEASPSSR*PKSYLP
Trigger: TGGCAGATAGGACTTTGGGCATCGGGAAGATGGTGA...AGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACAGGCGCCCGCCACCATaGCTGGCTAATTTTGGTATT +
Preference number: 4 (lower is better)
Translates to: QMPPAAGWLASVGQAFWYRRPPP*LANFGI
Trigger: AATACCAAAATTAGCCAGGCATGGTGGCGGGCGCCT...GTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGCAAACTCCTGACCTCTaGCCGCCTCGGCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLQTPDL*PPRPPR
Trigger: TCTGGGAGGCCGAGGCGGGCAGAGGTCAGGAGTTTG...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCCCGAGGCCGGGGTGTTaGCTGCGACAGCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFPRPGC*LRQPLT
Trigger: AGTGAGGGGCTGTCGCAGCCAACACCCCGGCCTCGG...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGACAGCAGAGCAGATGGCCTaGGGAAGGCAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VGHGDSEGNTNSNECTKTAEQMA*GRQGSL
Trigger: CAGGGACCCCTGCCTTCCCCAGGCCATCTGCTCTGC...TGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp AGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGAAGCTTTTTGGTACCTaGGAGCTCAACAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: RCQPRRVNGPLRALPGRKKLFGT*ELNSIK
Trigger: TTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTT...CTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp CCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCGTTGGCCAAGCTTTTTaGTACCTGGGAGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: PSVGKSLRLASLTKPHLPVGQAF*YLGAQQ
Trigger: CTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAAC...GGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACAAACGACGCCCCTGCTaGCCTGGCGAGGCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: AKLFGTWELNSIKGCNLYKRRPC*PGEAGA
Trigger: AGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTT...GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGAAACGACGCCCCTGCTaGCCTGGCGAGGCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWKRRPC*PGEAGA
Trigger: AGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTT...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGAGAGGACCTTGTCGTTaGGGCCCAGGCGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLRGPCR*GPGAAR
Trigger: CCGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCT...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAATCTCCATTCTGCGTaGTATAACGCACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QLAGWQALAKLFGTWELNNLHSA*YNAPRA
Trigger: TGCCCTGGGTGCGTTATATCACGCAGAATGGAGATT...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp TGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCATGGGAGGCTGAGATATaGGAATTGCTTGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: CSWLAGKRWPSFLVPGSSWEAEI*ELLEPG
Trigger: CCCAGGTTCAAGCAATTCTCATATCTCAGCCTCCCA...TGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp CCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTCTTCTCTCAGTAATTTaGAGCCATGCTCTATCTTCG +
Preference number: 4 (lower is better)
Translates to: PSWQMPPAAGWLASVGQALLSVI*SHALSS
Trigger: CGAAGATAGAGCATGGCTTCAAATTACTGAGAGAAG...AGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACAGGTGTGTCCCCTGGTaGTGCCACCAGGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: AKLFGTWELNSIKGCNLYRCVPW*CHQEPR
Trigger: TCGGGGCTCCTGGTGGCAGCACCAGGGGACACACCT...GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGGTCCAGCACTGCAGCTaGCTCTTCCCGCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLVQHCS*LFPQLL
Trigger: AAGCAGCTGCGGGAAGAGGCAGCTGCAGTGCTGGAC...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp TTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTAGGAGTCATCTCCACTaGATTTCACCATCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: FVADATCSWLAGKRWPSFRSHLH*ISPSSR
Trigger: TCGGGAAGATGGTGAAATGCAGTGGAGATGACTCCT...AAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCGTCTTAACAGCATTTTaGTCTTTTCTATTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALVLTAF*SFLFRV
Trigger: GACTCTGAATAGAAAAGAGCAAAATGCTGTTAAGAC...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAACAAAGACCGCGCCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQQRPRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTTTG...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp AGTGTTGCTGTTAGGATCTTCCCTGAGTCTGATATGTTCTGTGGTTCGACTATGCGGCGGCAGCGACGGTaGGGACTGCTGGGCGTTGAG +
Preference number: 4 (lower is better)
Translates to: SVAVRIFPESDMFCGSTMRRQRR*GLLGVE
Trigger: CTCAACGCCCAGCAGTCCCCACCGTCGCTGCCGCCG...CATAGTCGAACCACAGAACATATCAGACTCAGGGAAGATCCTAACAGCAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAACCCCGTGGGCCAGGATaGGCGACAGCATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTEPRGPG*ATASPP
Trigger: AGGAGGGGATGCTGTCGCCCATCCTGGCCCACGGGG...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR CCA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACGCAGAGCAGATGGCCTaGGGAAGGCAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HPSPETDFRGKETRLLEDAEQMA*GRQGSL
Trigger: CAGGGACCCCTGCCTTCCCCAGGCCATCTGCTCTGC...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp ACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGAAGCTTTTTGGTACCTaGGAGCTCAACAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: TREGPSIWWVWQVCPLVLKLFGT*ELNSIK
Trigger: TTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTT...CAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCTGGTGGGTCAATACTGATGTTGGCCAAGCTTTTTaGTACCTGGGAGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: LRLASLTKPHLPWWVNTDVGQAF*YLGAQQ
Trigger: CTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAAC...ATCAGTATTGACCCACCAGGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGACGTGGGTGACACGTaGCCCCGCTCTCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLDVGDT*PRSLDP
Trigger: AGGGTCCAGAGAGCGGGGCCACGTGTCACCCACGTC...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGATAAACATCTTGGCCTaGTTGTCTGCAAACCAGATT +
Preference number: 4 (lower is better)
Translates to: EAGASFVADATCSWLAGKINILA*LSANQI
Trigger: AATCTGGTTTGCAGACAACCAGGCCAAGATGTTTAT...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAAAAATATGAAAAATTaGCCCAGCATGGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: ARLALPSWQMPPAAGWLAKNMKN*PSMVAC
Trigger: ACATGCCACCATGCTGGGCCAATTTTTCATATTTTT...TGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAAGCTATATATTGGTGCATaGACTTCTCAGGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PASTCKWPAAGAAGKEDKLYIGA*TSQGFS
Trigger: AGAAAAGCCCTGAGAAGTCCATGCACCAATATATAG...CTTGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CAGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAACTATTGAAGGACTTTTaGTTGCTTTCCAATTTCCTG +
Preference number: 4 (lower is better)
Translates to: QVPASTCKWPAAGAAGKELLKDF*LLSNFL
Trigger: CAGGAAATTGGAAAGCAACCAAAAGTCCTTCAATAG...TTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTTTTAGACAGATCCAATaGTTTCTAAGGTTTTCCGGC +
Preference number: 4 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPFRQIQ*FLRFSG
Trigger: GCCGGAAAACCTTAGAAACCATTGGATCTGTCTAAA...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGGGAAGACAAGAAGGGTaGGGGCTCGTCCTCACCAAG +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLGRQEG*GLVLTK
Trigger: CTTGGTGAGGACGAGCCCTCACCCTTCTTGTCTTCC...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGAGTGACAGCATCTCGTaGCCCAGGCTGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLSDSIS*PRLALG
Trigger: TCCCAGGGCCAGCCTGGGTCACGAGATGCTGTCACT...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp TGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTTTTCTGGGTTCCTTTaGAAAGCCAGCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: WQMPPAAGWLASVGQAFWFSGFL*KASCLS
Trigger: AGACAGACAGCTGGCTTTTCAAAGGAACCCAGAAAA...CCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACGTGGCAGATGCCACCTaGAGCTGGCTGGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: HPSPETDFRGKETRLLEDVADAT*SWLAGK
Trigger: CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCAC...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGTGGCAGATGCCACCTaGAGCTGGCTGGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLVADAT*SWLAGK
Trigger: CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCAC...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAACTCGTCCTCACCAAGTaGTTCCTGAGTGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQLVLTK*FLSAVG
Trigger: TCCTACGGCACTCAGGAAGCACTTGGTGAGGACGAG...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp CTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCTGGTGGGTCAATACTGATCCCCCTTCCTGTTTTTaGCTTTCAGAGATAACCAGG +
Preference number: 4 (lower is better)
Translates to: LRLASLTKPHLPWWVNTDPPSCF*LSEITR
Trigger: CCTGGTTATCTCTGAAAGGCAAAAACAGGAAGGGGG...ATCAGTATTGACCCACCAGGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp TGGGTGACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTCTGAGATATGAGAATTaGTTGAACCTGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: WVTRGPALWTLSGKKSEALRYEN*LNLGGR
Trigger: TCTGCCTCCCAGGTTCAAGCAATTCTCATATCTCAG...AGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCGTTGGTGACGGTGGCTaGTGGCCGCGGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: WELNSIKGCNLYTEKFHIVGDGG*WPRGPC
Trigger: ACAGGGGCCCCGCGGCCACCAGCCACCGTCACCAAC...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCGATGCCACCTGCAGCTaGCTGGCTGGCAAGCGTTGG +
Preference number: 4 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFDATCS*LAGKRW
Trigger: CCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATC...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACGAAGTGCTCCACCTCTaGCATGTCCACGTCGCCACG +
Preference number: 4 (lower is better)
Translates to: AKLFGTWELNSIKGCNLYEVLHL*HVHVAT
Trigger: CGTGGCGACGTGGACATGTCAGAGGTGGAGCACTTC...GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR TCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAGTGACAGCATCTCGTaGCCCAGGCTGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTESDSIS*PRLALG
Trigger: TCCCAGGGCCAGCCTGGGTCACGAGATGCTGTCACT...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp AGTGTTGCTGTTAGGATCTTCCCTGAGTCTGATATGTTCTGTGGTTCGACTATGAGCAGAGGGAGCTGGTaGCACCTCGTGGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SVAVRIFPESDMFCGSTMSRGSW*HLVGPQ
Trigger: CTGTGGCCCCACGAGGTGTCACCAGCTCCCTCTGCT...CATAGTCGAACCACAGAACATATCAGACTCAGGGAAGATCCTAACAGCAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTCCTTGTGCCTGATGTaGGTACACTGTTTACAATTT +
Preference number: 4 (lower is better)
Translates to: KWQQNDAPAGLARLALPSSLCLM*VHCLQF
Trigger: AAATTGTAAACAGTGTACTCACATCAGGCACAAGGA...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp TGGGTGACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTACTGCTGTAATCTCTTaGATGAATGGACTACAGTGG +
Preference number: 4 (lower is better)
Translates to: WVTRGPALWTLSGKKSEATAVIS*MNGLQW
Trigger: CCACTGTAGTCCATTCATGCAAGAGATTACAGCAGT...AGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp ACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGATCTCGTTAGACTTTTaGTGGATATATATAGATCCC +
Preference number: 4 (lower is better)
Translates to: TREGPSIWWVWQVCPLVLISLDF*WIYIDP
Trigger: GGGATCTATATATATCCAGCAAAAGTCTAACGAGAT...CAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCCTGCAGCTGGCTGGCTaGCAAGCGTTGGCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFLQLAG*QALAKL
Trigger: AAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAG...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACCTTTGGTCTGAGGCCTaGGCTGGGGCAGCGTCATTG +
Preference number: 4 (lower is better)
Translates to: AKLFGTWELNSIKGCNLYLWSEA*AGAASL
Trigger: CAATGACGCTGCCCCAGCCCAGGCCTCAGACCAAAG...GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCCTGCTGATATGGGTGTaGACAGTGAGGGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFLLIWV*TVRGGA
Trigger: GGCCCCTCCCCTCACTGTCCACACCCATATCAGCAG...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGAGCGAGGATGGCAAATaGGGTCAGCCCCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLSEDGK*GQPQGF
Trigger: AAAACCCTGGGGCTGACCCCATTTGCCATCCTCGCT...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGACACCATCAGGATGGGCATaGAGTGCTCCACCTCTGACA +
Preference number: 4 (lower is better)
Translates to: VGHGDSEGNTNSNECTKTPSGWA*SAPPLT
Trigger: TGTCAGAGGTGGAGCACTTCATGCCCATCCTGATGG...TGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTGTGGCCTTCCTGAGTaGTGTACTCCTGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLCGLPE*CTPAGS
Trigger: AGATCCTGCAGGAGTACATCACTCAGGAAGGCCACA...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp ACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTGTGTACATATTTCCTaGATAGCTACATGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: TRGPALWTLSGKKSEAGVCVHIS*IATWLN
Trigger: GTTCAACCATGTAGCTATTCAGGAAATATGTACACA...GACGCCAGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACAGCTGCAGTGAGCCGTaGCCATGCCACTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: HPSPETDFRGKETRLLEDSCSEP*PCHCTL
Trigger: CAAAGTGCAGTGGCATGGTCACGGCTCACTGCAGCT...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp AGGGTAACACAAACAGCAACGAATGCACAAAGACAAGTTCCAGGAACACCCATATTGGCGCTGACCGTGTaGCCCAGCCATCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: RVTQTATNAQRQVPGTPILALTV*PSHPTP
Trigger: AGGAGTGGGATGGCTGGGTCACACGGTCAGCGCCAA...TATGGGTGTTCCTGGAACTTGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444449.6
CDS-3UTR GCA 90 bp TGGGTGACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTGTCTGCTTCATTTCCTaGATTTCTACAGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: WVTRGPALWTLSGKKSEAVCFIS*ISTVCS
Trigger: ACTACAGACTGTAGAAATGCAGGAAATGAAGCAGAC...AGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp TTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTGTCTTTACCTCTGGCTaGTTTAAGTATCTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: FVADATCSWLAGKRWPSFVFTSG*FKYLLP
Trigger: AGGCAAAAGATACTTAAAGCAGCCAGAGGTAAAGAC...AAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGGACCGCCGCTTGAACTaGCTTTTGGCCTTGATCATG +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLDRRLN*LLALIM
Trigger: CATGATCAAGGCCAAAAGCCAGTTCAAGCGGCGGTC...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp GGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTAAGCTTTTTGGTACCTaGGAGCTCAACAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: GRCHLQLAGWQALAKLFGKLFGT*ELNSIK
Trigger: TTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTT...ACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAACCAGGCAAGCCCTGTaGTCACGCAGGAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTETRQAL*SRRRSW
Trigger: CCAACTCCTCCTGCGTGACCACAGGGCTTGCCTGGT...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACGGGGCTTCACCATGCTaGCCATGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: HPSPETDFRGKETRLLEDGASPC*PCWSRT
Trigger: AGTTCGAGACCAGCATGGCCAGCATGGTGAAGCCCC...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTTTTTCAACTCACTCTTaGTTGAATCCATGGATGCAG +
Preference number: 4 (lower is better)
Translates to: GRCHLQLAGWQALAKLFGFSTHS*LNPWMQ
Trigger: CTGCATCCATGGATTCAACCAAGAGTGAGTTGAAAA...ACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACCATTCTTCCGATACTTaGTGCCTTCGGACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: AKLFGTWELNSIKGCNLYHSSDT*CLRTAR
Trigger: CCTGGCGGTCCGAAGGCATCAAGTATCGGAAGAATG...GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGCATTCTTCCGATACTTaGTGCCTTCGGACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLHSSDT*CLRTAR
Trigger: CCTGGCGGTCCGAAGGCATCAAGTATCGGAAGAATG...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACAAGGACCATGCTCTaGGTGGGCCATCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: AKLFGTWELNSIKGCNLYTRTML*VGHQFG
Trigger: CCCAAACTGATGGCCCACTCAGAGCATGGTCCTTGT...GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAGTCTGCAAACCAGATTaGTATTACAAGCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQVCKPD*YYKRGV
Trigger: GACCCCACGCTTGTAATATCAATCTGGTTTGCAGAC...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp TTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTATCACTGCTCTAGTTaGATTCATTTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: FVADATCSWLAGKRWPSFYHCSS*IHFHCC
Trigger: ACAGCAGTGAAAATGAATTCAACTAGAGCAGTGATA...AAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGCTGGTCTCAAACTCCTaGCCTAAAATGATCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLLVSNS*PKMIWP
Trigger: CGGCCAGATCATTTTAGGTCAGGAGTTTGAGACCAG...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGACAACTCCTGAGCTCAAGTaGTTCACCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VGHGDSEGNTNSNECTKTTPELK*FTCFSL
Trigger: GAGGCTGAAGCAGGTGAATCACTTGAGCTCAGGAGT...TGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCCCACGGATTTGCTTTTaGCGCGGCCCGTGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFPRICF*RGPCCQ
Trigger: TTGACAACACGGGCCGCGGCAAAAGCAAATCCGTGG...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGCTCGTCCTCACCAAGTaGTTCCTGAGTGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWLVLTK*FLSAVG
Trigger: TCCTACGGCACTCAGGAAGCACTTGGTGAGGACGAG...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR GCA 90 bp TACGAATTTAGGTTTGTGTATCATGCTTTGGACTCAACGGTTTCCTGGATCTTAGCCACAGGCGAGGCCTaGGAGTCCAGGGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: YEFRFVYHALDSTVSWILATGEA*ESREQA
Trigger: TGCCTGCTCCCTGGACTCGCAGGCCTCGCCTGTGGC...TAAGATCCAGGAAACCGTTGAGTCCAAAGCATGATACACAAACCTAAATTCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGACAACTATCTTGGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VGHGDSEGNTNSNECTKTTILAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATAGT...TGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTAGGCGGGAGCCACCATaGCCGGCTTGTCCTACCTTT +
Preference number: 4 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFRREPP*PACPTF
Trigger: AAAGGTAGGACAAGCCGGGCATGGTGGCTCCCGCCT...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACAGACTCTCGTTTCGTTaGCCAGGCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: HPSPETDFRGKETRLLEDRLSFR*PGWSAV
Trigger: CACTGCACTCCAGCCTGGGCAACGAAACGAGAGTCT...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGTACTCGATGCGGCTGTaGGAGTGCTTCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWYSMRL*ECFSIT
Trigger: GGTGATCGAGAAGCACTCCCACAGCCGCATCGAGTA...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AGGGTAACACAAACAGCAACGAATGCACAAAGACAAGTTCCAGGAACACCCATACGTGGCCCCGCTCTCTaGACCCTCAGTGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RVTQTATNAQRQVPGTPIRGPAL*TLSGKK
Trigger: CTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACG...TATGGGTGTTCCTGGAACTTGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GTGGTCCCTTTTCCTATTGAAGGACTTTTGGTTGCTTTCCAATTTCCTGCTATCAGGAGTGGTGGCCCATaGTCCAGCACTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VVPFPIEGLLVAFQFPAIRSGGP*SSTAAA
Trigger: GGCAGCTGCAGTGCTGGACCATGGGCCACCACTCCT...GATAGCAGGAAATTGGAAAGCAACCAAAAGTCCTTCAATAGGAAAAGGGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCGGGTGGCAGCGAGGATaGCAAATGGGGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: WELNSIKGCNLYTEKFHIGWQRG*QMGSAP
Trigger: TGGGGCTGACCCCATTTGCCATCCTCGCTGCCACCC...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGCTGTCTGTCTGTCTaGTTGTCATGTCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQSCLSV*LSCLKV
Trigger: CACCTTCAGACATGACAACCAGACAGACAGACAGCT...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGCAGCCATCCCACTCCTaGGTATTTACCCAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLQPSHS*VFTQEV
Trigger: AACCTCTTGGGTAAATACCCAGGAGTGGGATGGCTG...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444449.6
CDS-3UTR TCA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGACTGGCTTTTGGCCTTaGTCATGTACTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLTGFWP*SCTRCG
Trigger: GCCGCATCGAGTACATGATCAAGGCCAAAAGCCAGT...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGACAAATCTCCATTCTGCGTaGTATAACGCACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VGHGDSEGNTNSNECTKTNLHSA*YNAPRA
Trigger: TGCCCTGGGTGCGTTATATCACGCAGAATGGAGATT...TGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR TCA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAACACTTTCCTTGTGCCTaGTGTGAGTACACTGTTTAC +
Preference number: 4 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQHFPCA*CEYTVY
Trigger: GTAAACAGTGTACTCACATCAGGCACAAGGAAAGTG...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAATTCAAGCGAATCTCCTaGCCCAGCCACCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTEFKRIS*PSHLSS
Trigger: GCTACTCAGGTGGCTGGGGCAGGAGATTCGCTTGAA...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CAAATTATTTGCCTTGTTGGATGTTGTAACAGCTCTGTCTTAACAGCATTTTGCGACGGTGGGGACTGCTaGGCGTTGAGCAAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QIICLVGCCNSSVLTAFCDGGDC*ALSKAG
Trigger: CCCGGCCTTGCTCAACGCCCAGCAGTCCCCACCGTC...GCAAAATGCTGTTAAGACAGAGCTGTTACAACATCCAACAAGGCAAATAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACGATAGCCGCACACACTaGTGGAACTTCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: AKLFGTWELNSIKGCNLYDSRTH*WNFTSS
Trigger: GGAGGATGTGAAGTTCCACCAGTGTGTGCGGCTATC...GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AGGGTAACACAAACAGCAACGAATGCACAAAGACAAGTTCCAGGAACACCCATACCCCACCTCCCCTGGTaGGTCAATACTGATCTGGCT +
Preference number: 4 (lower is better)
Translates to: RVTQTATNAQRQVPGTPIPHLPW*VNTDLA
Trigger: AGCCAGATCAGTATTGACCCACCAGGGGAGGTGGGG...TATGGGTGTTCCTGGAACTTGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CCA 90 bp GTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGACACTCAAGCCCAGGAGTTaGAGACCAGTGTGGACAAAA +
Preference number: 4 (lower is better)
Translates to: VGHGDSEGNTNSNECTKTLKPRS*RPVWTK
Trigger: TTTTGTCCACACTGGTCTCCAACTCCTGGGCTTGAG...TGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGGGGGTTTCTCCTTGTTaGTCCGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWGVSPC*SGWSQT
Trigger: AGTTTGAGACCAGCCGGACCAACAAGGAGAAACCCC...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCAGTGCAAGACCAGCCTaGGCAACATGGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFSARPA*ATWQNS
Trigger: GGAGTTTTGCCATGTTGCCCAGGCTGGTCTTGCACT...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGAGAGGTCATTCTGGGTaGAATTCTGGTCTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWRGHSG*NSGLPA
Trigger: TGCGGGGAGACCAGAATTCCACCCAGAATGACCTCT...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCGGAAGACTCGCATCTTaGTGGAGCCCACGATCTCGC +
Preference number: 4 (lower is better)
Translates to: WELNSIKGCNLYTEKFHIGRLAS*WSPRSR
Trigger: GCGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCC...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACACCCACTCTTCTCAATaGTCTTCAGGTAGCGCACCT +
Preference number: 4 (lower is better)
Translates to: HPSPETDFRGKETRLLEDTHSSQ*SSGSAP
Trigger: AGGTGCGCTACCTGAAGATCATTGAGAAGAGTGGGT...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACAGAAACGAGACTTCTTaGAGACCAGCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AKLFGTWELNSIKGCNLYRNETS*RPASSG
Trigger: CCCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCT...GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGAGAAACGAGACTTCTTaGAGACCAGCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLRNETS*RPASSG
Trigger: CCCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCT...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAGATGTGCCCTCATGTTaGGGGTCTATTGTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTEDVPSC*GSIVCE
Trigger: CTCGCACACAATAGACCCTCAACATGAGGGCACATC...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCTGGGGGTGGATCACCTaGGGTCAGGGTTCAAGACCA +
Preference number: 4 (lower is better)
Translates to: YTKECANHQCLMDSREHTWGWIT*GQGSRP
Trigger: TGGTCTTGAACCCTGACCTCAGGTGATCCACCCCCA...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACAGAGAGAGGACACAGTaGTTATTCTCAGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: HPSPETDFRGKETRLLEDRERTQ*LFSGVE
Trigger: CTCCACCCCTGAGAATAAGCACTGTGTCCTCTCTCT...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAGTGAGTCGGCATCATTaGGCACGGGAATGTGGATCT +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTEVSRHH*ARECGS
Trigger: AGATCCACATTCCCGTGCCCAATGATGCCGACTCAC...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAACTGGCTGGCAAGCGTTaGCCAAGCTTTTTGGTACCT +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTELAGKR*PSFLVP
Trigger: AGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAG...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CCA 90 bp AGTGTTGCTGTTAGGATCTTCCCTGAGTCTGATATGTTCTGTGGTTCGACTATGCAGGGGATGCTGCTGTaGACACAAGGACCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SVAVRIFPESDMFCGSTMQGMLL*TQGPCS
Trigger: AGAGCATGGTCCTTGTGTCCACAGCAGCATCCCCTG...CATAGTCGAACCACAGAACATATCAGACTCAGGGAAGATCCTAACAGCAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGAGCCACCTGAGTAGCTaGGATTACAGGTATGAGCCA +
Preference number: 4 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLSHLSS*DYRYEP
Trigger: TGGCTCATACCTGTAATCCCAGCTACTCAGGTGGCT...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTTGTGGCCTTCCTGAGTaGTGTACTCCTGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFCGLPE*CTPAGS
Trigger: AGATCCTGCAGGAGTACATCACTCAGGAAGGCCACA...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAGAAACGAGACTTCTTaGAGACCAGCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTERNETS*RPASSG
Trigger: CCCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCT...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp GCTCTAGTTGAATTCATTTTCACTGCTGTAATCTCTTGCATGAATGGACTACAGCCGGGATGCAGAGGTTaGAGTGAGCAAAGACCGCGC +
Preference number: 4 (lower is better)
Translates to: ALVEFIFTAVISCMNGLQPGCRG*SEQRPR
Trigger: GCGCGGTCTTTGCTCACTGCAACCTCTGCATCCCGG...CTGTAGTCCATTCATGCAAGAGATTACAGCAGTGAAAATGAATTCAACTAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp AGTGTTGCTGTTAGGATCTTCCCTGAGTCTGATATGTTCTGTGGTTCGACTATGAAACCCCACCTCCCCTaGTGGGTCAATACTGATCTG +
Preference number: 4 (lower is better)
Translates to: SVAVRIFPESDMFCGSTMKPHLP*WVNTDL
Trigger: CAGATCAGTATTGACCCACCAGGGGAGGTGGGGTTT...CATAGTCGAACCACAGAACATATCAGACTCAGGGAAGATCCTAACAGCAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCTGTGGCCTTCCTGAGTaGTGTACTCCTGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: WELNSIKGCNLYTEKFHICGLPE*CTPAGS
Trigger: AGATCCTGCAGGAGTACATCACTCAGGAAGGCCACA...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp TACGAATTTAGGTTTGTGTATCATGCTTTGGACTCAACGGTTTCCTGGATCTTATTTCTGGAGGGGCCATaGGGGCTGGCTGCTGATATG +
Preference number: 4 (lower is better)
Translates to: YEFRFVYHALDSTVSWILFLEGP*GLAADM
Trigger: CATATCAGCAGCCAGCCCTCATGGCCCCTCCAGAAA...TAAGATCCAGGAAACCGTTGAGTCCAAAGCATGATACACAAACCTAAATTCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CAAATTATTTGCCTTGTTGGATGTTGTAACAGCTCTGTCTTAACAGCATTTTGCTTCCTTCGTGGCAGATaGCACCTGCAGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QIICLVGCCNSSVLTAFCFLRGR*HLQLAG
Trigger: GCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAA...GCAAAATGCTGTTAAGACAGAGCTGTTACAACATCCAACAAGGCAAATAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGATAGACATGAGCCACTaGACCTGGCCATTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLIDMSH*TWPFSN
Trigger: ATTAGAGAATGGCCAGGTGCAGTGGCTCATGTCTAT...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGCGTTCTTCTTGGATGTaGCAACCAGATACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWRSSWM*QPDTGC
Trigger: ACAACCTGTATCTGGTTGCCACATCCAAGAAGAACG...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR CCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAATCAAAATGCAGATTTaGCTGGGCGCAGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTEIKMQI*LGAVAH
Trigger: ATGAGCCACTGCGCCCAGCCAAATCTGCATTTTGAT...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp CCAGGGAGGTTTTCTGTCATAAACATCTTGGCCTGGTaGTCTGCAAACCAGATTGATATTACAAGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGRFSVINILAW*SANQIDITSVG
Trigger: CCCCACGCTTGTAATATCAATCTGGTTTGCAGACAACCAGGCCAAGATGTTTATGACAGAAAACCTCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp TCTCTTTGCATGTGGCTGCTCCCCAGTTCTCATTTTTaGGTTTGTGTTAGATACTTGCTGGCATGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLCMWLLPSSHF*VCVRYLLACWA
Trigger: GGCCCAACATGCCAGCAAGTATCTAACACAAACCAAAAAATGAGAACTGGGGAGCAGCCACATGCAAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp GCTCTAGTTGAATTCATTTTCACTGCTGTAATCTCTTGCATGAATGGACTACAGCATTCTTCCGATACTTaGTGCCTTCGGACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: ALVEFIFTAVISCMNGLQHSSDT*CLRTAR
Trigger: CCTGGCGGTCCGAAGGCATCAAGTATCGGAAGAATG...CTGTAGTCCATTCATGCAAGAGATTACAGCAGTGAAAATGAATTCAACTAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCACCCACTCTTCTCAATaGTCTTCAGGTAGCGCACCT +
Preference number: 4 (lower is better)
Translates to: WELNSIKGCNLYTEKFHITHSSQ*SSGSAP
Trigger: AGGTGCGCTACCTGAAGATCATTGAGAAGAGTGGGT...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR GCA 90 bp AGTGTTGCTGTTAGGATCTTCCCTGAGTCTGATATGTTCTGTGGTTCGACTATGACGGCTAGGTGCGTCTaGTTCATTTCCTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: SVAVRIFPESDMFCGSTMTARCV*FISCIS
Trigger: AGAAATGCAGGAAATGAAGCAGACGCACCTAGCCGT...CATAGTCGAACCACAGAACATATCAGACTCAGGGAAGATCCTAACAGCAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCTTGCCCAGGCTGGAGTaGAGTAACACTATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WELNSIKGCNLYTEKFHILPRLE*SNTILA
Trigger: AGCCAAGATAGTGTTACTGCACTCCAGCCTGGGCAA...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCTATGTCCCGGGTAACTaGCTCAGACAGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WELNSIKGCNLYTEKFHIYVPGN*LRQLSS
Trigger: AGAAGAGAGCTGTCTGAGGCAGTTACCCGGGACATA...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACGCTTTTATTTCTTCTTaGATCATGCCCTTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: AKLFGTWELNSIKGCNLYAFISS*IMPFRL
Trigger: CAGACGGAAGGGCATGATGCAAGAAGAAATAAAAGC...GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp TCTGTAGTGGAGGGTTTGCAGGTCTTATCTGATAAGTaGCTGGAAACTGAAGTCTCTCTTCTGTCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SVVEGLQVLSDK*LETEVSLLSCG
Trigger: TCCACAGGACAGAAGAGAGACTTCAGTTTCCAGCAACTTATCAGATAAGACCTGCAAACCCTCCACTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp AGCATAGTGACCTTGAAAGGCATGAACACCAGGATGTaGTCTAGTACTTCAGTTGCGCCTTTTGTCGCTACT +
Preference number: 4 (lower is better)
Translates to: SIVTLKGMNTRM*SSTSVAPFVAT
Trigger: AGTAGCGACAAAAGGCGCAACTGAAGTACTAGACAACATCCTGGTGTTCATGCCTTTCAAGGTCACTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCCACTTCCTGCATATGTaGTATTTCCCCCATGGACCA +
Preference number: 4 (lower is better)
Translates to: WELNSIKGCNLYTEKFHIHFLHM*YFPHGP
Trigger: TGGTCCATGGGGGAAATAGCACATATGCAGGAAGTG...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCGTTCTTCTTGGATGTaGCAACCAGATACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFRSSWM*QPDTGC
Trigger: ACAACCTGTATCTGGTTGCCACATCCAAGAAGAACG...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR CCA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGAAGCTTTTTGGTACCTaGGAGCTCAACAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLKLFGT*ELNSIK
Trigger: TTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTT...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR TCA 90 bp AGTGTTGCTGTTAGGATCTTCCCTGAGTCTGATATGTTCTGTGGTTCGACTATGGGTCCCTTTTCCTATTaGAGGACTTTTGGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SVAVRIFPESDMFCGSTMGPFSY*RTFGCF
Trigger: AAAGCAACCAAAAGTCCTTCAATAGGAAAAGGGACC...CATAGTCGAACCACAGAACATATCAGACTCAGGGAAGATCCTAACAGCAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCCTTTTGCTGGGTCTCTaGTTTGGGTTAGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: YTKECANHQCLMDSREHTLLLGL*FGLVVF
Trigger: GAAAACCACTAACCCAAATCAGAGACCCAGCAAAAG...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCGCATACTTATCAAAATaGAGATTTGGCTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: YTKECANHQCLMDSREHTAYLSK*RFGWAQ
Trigger: CTGCGCCCAGCCAAATCTGCATTTTGATAAGTATGC...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CAAATTATTTGCCTTGTTGGATGTTGTAACAGCTCTGTCTTAACAGCATTTTGCGACCGCCGCTTGAACTaGCTTTTGGCCTTGATCATG +
Preference number: 4 (lower is better)
Translates to: QIICLVGCCNSSVLTAFCDRRLN*LLALIM
Trigger: CATGATCAAGGCCAAAAGCCAGTTCAAGCGGCGGTC...GCAAAATGCTGTTAAGACAGAGCTGTTACAACATCCAACAAGGCAAATAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTATTCTTGGAGTTGTGTaGAAACTTCTCGGGGATCTA +
Preference number: 4 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFILGVV*KLLGDL
Trigger: TAGATCCCCGAGAAGTTTCCACACAACTCCAAGAAT...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp AACATATACACAAAAGAGTGTGCAAATCATCAATGCTaGATGGATTCTCGAGAGCACACCCATGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: NIYTKECANHQC*MDSREHTHVTC
Trigger: GCAGGTGACATGGGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTATATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR TCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAACTAACTAATTTCTCTTaGAAATTCCTCAGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTELTNFS*KFLREW
Trigger: CCACTCTCTGAGGAATTTTCAAGAGAAATTAGTTAG...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp TCATTTCCTGCATTTCTACAGTCTGTAGTGGAGGGTTaGCAGGTCTTATCTGATAAGTTGCTGGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: SFPAFLQSVVEG*QVLSDKLLETE
Trigger: TTCAGTTTCCAGCAACTTATCAGATAAGACCTGCAAACCCTCCACTACAGACTGTAGAAATGCAGGAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp TCTTGCATGAATGGACTACAGTGGTCCCTTTTCCTATaGAAGGACTTTTGGTTGCTTTCCAATTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: SCMNGLQWSLFL*KDFWLLSNFLL
Trigger: TAGCAGGAAATTGGAAAGCAACCAAAAGTCCTTCAATAGGAAAAGGGACCACTGTAGTCCATTCATGCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAATATCATGAACTATGCTaGTGTAAGTGTAACTGTACA +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTEYHELC*CKCNCT
Trigger: TGTACAGTTACACTTACAGCAGCATAGTTCATGATA...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAGTTTAGAACATCCCTaGATTTATCCTGATTTTTCC +
Preference number: 4 (lower is better)
Translates to: LFGTWELNSIKGCNLYTESLEHP*IYPDFS
Trigger: GGAAAAATCAGGATAAATGCAGGGATGTTCTAAACT...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCATGAATGGACTACAGTaGTCCCTTTTCCTATTGAAG +
Preference number: 4 (lower is better)
Translates to: YTKECANHQCLMDSREHTMNGLQ*SLFLLK
Trigger: CTTCAATAGGAAAAGGGACCACTGTAGTCCATTCAT...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCTTCTTGAAATACTTTTaGTGGGTCTCTGATTTGGGT +
Preference number: 4 (lower is better)
Translates to: WELNSIKGCNLYTEKFHIFLKYF*WVSDLG
Trigger: ACCCAAATCAGAGACCCAGCAAAAGTATTTCAAGAA...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp TGGACTACAGTGGTCCCTTTTCCTATTGAAGGACTTTaGGTTGCTTTCCAATTTCCTGCTATCATGAACTAT +
Preference number: 4 (lower is better)
Translates to: WTTVVPFPIEGL*VAFQFPAIMNY
Trigger: ATAGTTCATGATAGCAGGAAATTGGAAAGCAACCAAAAGTCCTTCAATAGGAAAAGGGACCACTGTAGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp CCATGTTATTTATTCTCCTCCCAGACAGTCATTAACTaGGAACATTTTAACTCAGTTTACTCCCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: PCYLFSSQTVIN*EHFNSVYSLQT
Trigger: AGTCTGCAGGGAGTAAACTGAGTTAAAATGTTCCAAGTTAATGACTGTCTGGGAGGAGAATAAATAACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CAAATTATTTGCCTTGTTGGATGTTGTAACAGCTCTGTCTTAACAGCATTTTGCAATCTCTTGCATGAATaGACTACAGTGGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: QIICLVGCCNSSVLTAFCNLLHE*TTVVPF
Trigger: AAAAGGGACCACTGTAGTCCATTCATGCAAGAGATT...GCAAAATGCTGTTAAGACAGAGCTGTTACAACATCCAACAAGGCAAATAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR GCA 90 bp GCTCTAGTTGAATTCATTTTCACTGCTGTAATCTCTTGCATGAATGGACTACAGTACAATCTTATTTTATaGTTTCTGCAGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ALVEFIFTAVISCMNGLQYNLIL*FLQPEM
Trigger: CATCTCTGGCTGCAGAAAGCATAAAATAAGATTGTA...CTGTAGTCCATTCATGCAAGAGATTACAGCAGTGAAAATGAATTCAACTAGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CCA 90 bp CAAATTATTTGCCTTGTTGGATGTTGTAACAGCTCTGTCTTAACAGCATTTTGCTATCTGATAAGTTGCTaGAAACTGAAGTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QIICLVGCCNSSVLTAFCYLISC*KLKSLF
Trigger: GAAGAGAGACTTCAGTTTCCAGCAACTTATCAGATA...GCAAAATGCTGTTAAGACAGAGCTGTTACAACATCCAACAAGGCAAATAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp ATCTTCTTCATACTGTCTGTTCACACACAGCCCATTTaGTTAGGTTCTCTTTTTCTGATTTGTAGACGTTAT +
Preference number: 4 (lower is better)
Translates to: IFFILSVHTQPI*LGSLFLICRRY
Trigger: ATAACGTCTACAAATCAGAAAAAGAGAACCTAACAAAATGGGCTGTGTGTGAACAGACAGTATGAAGAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
3UTR CAA 72 bp CATCTTCAACTAGCAGCTTTGCTTCATTTACACCTGTaGTGGTTCCTAATATCTGGATTTATTTCTACAATC +
Preference number: 4 (lower is better)
Translates to: HLQLAALLHLHL*WFLISGFISTI
Trigger: GATTGTAGAAATAAATCCAGATATTAGGAACCACAACAGGTGTAAATGAAGCAAAGCTGCTAGTTGAAGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGCCCGAGGCCGGGGTGTaGGCTGCGACAGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWPEAGV*AATAPH
Trigger: GTGAGGGGCTGTCGCAGCCAACACCCCGGCCTCGGG...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCCCGAGGCCGGGGTGTaGGCTGCGACAGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: EAGASFVADATCSWLAGKPEAGV*AATAPH
Trigger: GTGAGGGGCTGTCGCAGCCAACACCCCGGCCTCGGG...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCCCAGAGCCTCCACTTaGGCAGGTCAGGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: PLLAWRGWRFLRGRCHLQPRAST*AGQGWP
Trigger: GGGCCAGCCCTGACCTGCCAAAGTGGAGGCTCTGGG...CTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCCGCCCGGGAAGGACTaGATGGACCACACGATCTCG +
Preference number: 5 (lower is better)
Translates to: PLLAWRGWRFLRGRCHLQPPGKD*MDHTIS
Trigger: CGAGATCGTGTGGTCCATCAAGTCCTTCCCGGGCGG...CTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp ACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACGGGGGCTTGCCCTCCTaGTCTTCGGCCTCCACACTA +
Preference number: 5 (lower is better)
Translates to: TTPLLAWRGWRFLRGRCHGGLPS*SSASTL
Trigger: TAGTGTGGAGGCCGAAGACAAGGAGGGCAAGCCCCC...GTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCGGGGGCTTGCCCTCCTaGTCTTCGGCCTCCACACTA +
Preference number: 5 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALGGLPS*SSASTL
Trigger: TAGTGTGGAGGCCGAAGACAAGGAGGGCAAGCCCCC...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCACACTGATCGGGGGCTaGCCCTCCTTGTCTTCGGCC +
Preference number: 5 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPTLIGG*PSLSSA
Trigger: GGCCGAAGACAAGGAGGGCAAGCCCCCGATCAGTGT...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGCCCGAGGCCGGGGTGTaGGCTGCGACAGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: KWQQNDAPAGLARLALPSPEAGV*AATAPH
Trigger: GTGAGGGGCTGTCGCAGCCAACACCCCGGCCTCGGG...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS TCA 90 bp GGCCCAGGCGCAGCTCGGGCATGCCCGAGAGGAAGACTCGCATCTTaGTGGAGCCCACGATCTCGCTGCGCAGGACATTGCCGTTGGCGC +
Preference number: 5 (lower is better)
Translates to: GPGAARACPRGRLAS*WSPRSRCAGHCRWR
Trigger: GCGCCAACGGCAATGTCCTGCGCAGCGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCCTCTCGGGCATGCCCGAGCTGCGCCTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000586461.1
ENST00000590756.5
ENST00000591966.1
CDS-3UTR CAA 90 bp GCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCACGGCAGATGAGCACCTaGCCCTTCAGGTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: ARLALPSWQMPPAAGWLARQMST*PFRSST
Trigger: CGTGCTGGACCTGAAGGGCAAGGTGCTCATCTGCCG...TGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp GCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCATTGCCGCGGCCCGTGTaGTCAAAGAGGACCTTGTCG +
Preference number: 5 (lower is better)
Translates to: APAGLARLALPSWQMPPALPRPV*SKRTLS
Trigger: CGACAAGGTCCTCTTTGACAACACGGGCCGCGGCAA...TGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCCTCCCCACCGTCGTCTaGAACTTGGGTGAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPLPTVV*NLGESA
Trigger: TGCCGACTCACCCAAGTTCAAGACGACGGTGGGGAG...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCCCGCCCGGGAAGGACTaGATGGACCACACGATCTCG +
Preference number: 5 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTPPGKD*MDHTIS
Trigger: CGAGATCGTGTGGTCCATCAAGTCCTTCCCGGGCGG...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp AGCAGGCAGACGCTACAGTGGCCCCCGAGCGCGCCAGGTGCCAGCCTCGACGTGAGGAAGACTCGCATCTaGATGGAGCCCACGATCTCG +
Preference number: 5 (lower is better)
Translates to: SRQTLQWPPSAPGASLDVRKTRI*MEPTIS
Trigger: CGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCCT...CACGTCGAGGCTGGCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp TGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCAAGAGGACCTTGTCGTaGAGGCCCAGGCGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: WPETREGPSIWWVWQVCPKRTLS*RPRRSS
Trigger: CGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCTT...GGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp AGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCAAAGAGGACCTTGTCGTaGAGGCCCAGGCGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: REGPSIWWVWQVCPLVLPKRTLS*RPRRSS
Trigger: CGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCTT...TGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTCCAGCTCCACGGATTaGCTTTTGCCGCGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWSSSTD*LLPRPV
Trigger: CACGGGCCGCGGCAAAAGCAAATCCGTGGAGCTGGA...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGATCCAGCTCCACGGATTaGCTTTTGCCGCGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGSSSTD*LLPRPV
Trigger: CACGGGCCGCGGCAAAAGCAAATCCGTGGAGCTGGA...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTGTTGACCGCCGCTaGAACTGGCTTTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPAVDRR*NWLLAL
Trigger: CAAGGCCAAAAGCCAGTTCAAGCGGCGGTCAACAGC...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCTGGATCTCCACGTTGTaGGCTGTTGACCGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPWISTL*AVDRRL
Trigger: CAAGCGGCGGTCAACAGCCAACAACGTGGAGATCCA...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCATGTGGATCTCCACGTaGTTGGCTGTTGACCGCCGC +
Preference number: 5 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPMWIST*LAVDRR
Trigger: GCGGCGGTCAACAGCCAACAACGTGGAGATCCACAT...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp CCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCATGTGGATCTCCACGTaGTTGGCTGTTGACCGCCGC +
Preference number: 5 (lower is better)
Translates to: PCWPGEAGASFVADATCSMWIST*LAVDRR
Trigger: GCGGCGGTCAACAGCCAACAACGTGGAGATCCACAT...GCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGGTGAGTCGGCATCATaGGGCACGGGAATGTGGATC +
Preference number: 5 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPGESAS*GTGMWI
Trigger: GATCCACATTCCCGTGCCCAATGATGCCGACTCACC...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCGCCCGGGAAGGACTaGATGGACCACACGATCTCG +
Preference number: 5 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVPPGKD*MDHTIS
Trigger: CGAGATCGTGTGGTCCATCAAGTCCTTCCCGGGCGG...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp AGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCAGGGGGCTTGCCCTCCTaGTCTTCGGCCTCCACACTA +
Preference number: 5 (lower is better)
Translates to: REGPSIWWVWQVCPLVLPGGLPS*SSASTL
Trigger: TAGTGTGGAGGCCGAAGACAAGGAGGGCAAGCCCCC...TGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGAACACTGATCGGGGGCTaGCCCTCCTTGTCTTCGGCC +
Preference number: 5 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGTLIGG*PSLSSA
Trigger: GGCCGAAGACAAGGAGGGCAAGCCCCCGATCAGTGT...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGGCTGGCTGGCAAGCGTaGGCCAAGCTTTTTGGTACC +
Preference number: 5 (lower is better)
Translates to: PLLAWRGWRFLRGRCHLQAGWQA*AKLFGT
Trigger: GGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGC...CTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp ACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTGGTCTCCCCGCACTTaGGGAGGCCGAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TRGPALWTLSGKKSEAGVWSPRT*GGRGRW
Trigger: CCACCTGCCTCGGCCTCCCAAAGTGCGGGGAGACCA...GACGCCAGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS TCA 90 bp TCCGCCTGGCCCAACCCTGCCCTAGGCTGTAATGTGTGTGCCTGGTaGGGCCATCCTCATGGGCAGGGCCCTTGGCAAGGGTACTCACGG +
Preference number: 5 (lower is better)
Translates to: SAWPNPALGCNVCAW*GHPHGQGPWQGYSR
Trigger: CCGTGAGTACCCTTGCCAAGGGCCCTGCCCATGAGGATGGCCTCACCAGGCACACACATTACAGCCTAGGGCAGGGTTGGGCCAGGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586461.1
CDS-3UTR CAA 90 bp ACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCGCAGGACATTGCCGTaGGCGCTGACCAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: TREGPSIWWVWQVCPLVLRRTLP*ALTKRL
Trigger: CAACCTCTTGGTCAGCGCCAACGGCAATGTCCTGCG...CAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGCGCAGGACATTGCCGTaGGCGCTGACCAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: QRPGRAPPSGGFGRCVPWRRTLP*ALTKRL
Trigger: CAACCTCTTGGTCAGCGCCAACGGCAATGTCCTGCG...CCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000590756.5
CDS-3UTR CAA 90 bp AGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCATTGCCGCGGCCCGTGTaGTCAAAGAGGACCTTGTCG +
Preference number: 5 (lower is better)
Translates to: REGPSIWWVWQVCPLVLPLPRPV*SKRTLS
Trigger: CGACAAGGTCCTCTTTGACAACACGGGCCGCGGCAA...TGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCTCCACGGATTTGCTTTaGCCGCGGCCCGTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GNKTTPLLAWRGWRFLRGSTDLL*PRPVLS
Trigger: TGACAACACGGGCCGCGGCAAAAGCAAATCCGTGGA...GCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCATCCAGCTCCACGGATTaGCTTTTGCCGCGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: ASFVADATCSWLAGKRWPSSSTD*LLPRPV
Trigger: CACGGGCCGCGGCAAAAGCAAATCCGTGGAGCTGGA...TGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp AGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGTGGATCTCCACGTTGTaGGCTGTTGACCGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: RCQPRRVNGPLRALPGRKWISTL*AVDRRL
Trigger: CAAGCGGCGGTCAACAGCCAACAACGTGGAGATCCA...CTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp CCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGCTCCCCACCGTCGTCTaGAACTTGGGTGAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: PETREGPSIWWVWQVCPLLPTVV*NLGESA
Trigger: TGCCGACTCACCCAAGTTCAAGACGACGGTGGGGAG...CAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCTCCCCACCGTCGTCTaGAACTTGGGTGAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVLPTVV*NLGESA
Trigger: TGCCGACTCACCCAAGTTCAAGACGACGGTGGGGAG...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCGCCACCATGCCCGGCTaGTCCTACCTTTTACAGATG +
Preference number: 5 (lower is better)
Translates to: PCWPGEAGASFVADATCSATMPG*SYLLQM
Trigger: CATCTGTAAAAGGTAGGACAAGCCGGGCATGGTGGC...GCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS TCA 90 bp GGCAAGGGTACTCACGGCCCGTGTTGTCAAAGAGGACCTTGTCGTTaGGGCCCAGGCGCAGCTCGGGCATGCCCGAGAGGAAGACTCGCA +
Preference number: 5 (lower is better)
Translates to: GKGTHGPCCQRGPCR*GPGAARACPRGRLA
Trigger: TGCGAGTCTTCCTCTCGGGCATGCCCGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCTTTGACAACACGGGCCGTGAGTACCCTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586461.1
CDS-3UTR CAA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGACGGCAGATGAGCACCTaGCCCTTCAGGTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGRQMST*PFRSST
Trigger: CGTGCTGGACCTGAAGGGCAAGGTGCTCATCTGCCG...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR CAA 90 bp GCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCACGCACGCGTTCTTCTaGGATGTGGCAACCAGATAC +
Preference number: 5 (lower is better)
Translates to: AGLARLALPSWQMPPAAGTHAFF*DVATRY
Trigger: GTATCTGGTTGCCACATCCAAGAAGAACGCGTGCGT...GCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGTCGCTGCGCAGGACATaGCCGTTGGCGCTGACCAAG +
Preference number: 5 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRSLRRT*PLALTK
Trigger: CTTGGTCAGCGCCAACGGCAATGTCCTGCGCAGCGA...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGAAGAGGACCTTGTCGTaGAGGCCCAGGCGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRKRTLS*RPRRSS
Trigger: CGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCTT...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp AGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCATCCACGGATTTGCTTTaGCCGCGGCCCGTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: REGPSIWWVWQVCPLVLPSTDLL*PRPVLS
Trigger: TGACAACACGGGCCGCGGCAAAAGCAAATCCGTGGA...TGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGAGGTGAGTCGGCATCATaGGGCACGGGAATGTGGATC +
Preference number: 5 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGGESAS*GTGMWI
Trigger: GATCCACATTCCCGTGCCCAATGATGCCGACTCACC...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCACCGTCGTCTTGAACTaGGGTGAGTCGGCATCATTG +
Preference number: 5 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALTVVLN*GESASL
Trigger: CAATGATGCCGACTCACCCAAGTTCAAGACGACGGT...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGGCTGGCTGGCAAGCGTaGGCCAAGCTTTTTGGTACC +
Preference number: 5 (lower is better)
Translates to: EAGASFVADATCSWLAGKAGWQA*AKLFGT
Trigger: GGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGC...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp AGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGTCTACTTCCTTCGTCTaGGGCTCCTGTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: RCQPRRVNGPLRALPGRKSTSFV*GSCGSP
Trigger: AGGAGACCCACAGGAGCCCAAGACGAAGGAAGTAGA...CTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp AGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCAGGGTTCAAGCCATTCTaGGGCCTCAGCCTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: REGPSIWWVWQVCPLVLPGFKPF*GLSLLS
Trigger: ACTCAGGAGGCTGAGGCCCAAGAATGGCTTGAACCC...TGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS CCA 90 bp GCCTGTGGGTCAGGATATACAGCATCCAGAACCCCTGTCCACTGCTaGCAACGCGGTGGCTGCAGCCCACCGCGTTACGTAGCAACAGGG +
Preference number: 5 (lower is better)
Translates to: ACGSGYTASRTPVHC*QRGGCSPPRYVATG
Trigger: CCCTGTTGCTACGTAACGCGGTGGGCTGCAGCCACCGCGTTGCCAGCAGTGGACAGGGGTTCTGGATGCTGTATATCCTGACCCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590945.5
CDS-3UTR CAA 90 bp CCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCCGGCAGATGAGCACCTaGCCCTTCAGGTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: PSVGKSLRLASLTKPHLPRQMST*PFRSST
Trigger: CGTGCTGGACCTGAAGGGCAAGGTGCTCATCTGCCG...GGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp CACAGGGTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCATCCATATCAAAGGCTaGACGTGGGTGTTGAGACGG +
Preference number: 5 (lower is better)
Translates to: HRVGRTGDQAQTWVTRGPIHIKG*TWVLRR
Trigger: CCGTCTCAACACCCACGTCAAGCCTTTGATATGGAT...GGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCACCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCAACTGGCTTTTGGCCTaGATCATGTACTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALNWLLA*IMYSMR
Trigger: CCGCATCGAGTACATGATCAAGGCCAAAAGCCAGTT...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp GTGGGGAGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCCGCTTGAACTGGCTTTaGGCCTTGATCATGTACTCG +
Preference number: 5 (lower is better)
Translates to: VGRTGDQAQTWVTRGPALRLNWL*ALIMYS
Trigger: CGAGTACATGATCAAGGCCAAAAGCCAGTTCAAGCG...GAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp GGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCCGTTGGCCAAGCTTTTaGGTACCTGGGAGCTCAACA +
Preference number: 5 (lower is better)
Translates to: GNKTTPLLAWRGWRFLRGRWPSF*VPGSST
Trigger: TGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACG...GCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGGCTCAAGCCCAGGAGTaGGAGACCAGTGTGGACAAA +
Preference number: 5 (lower is better)
Translates to: EAGASFVADATCSWLAGKAQAQE*ETSVDK
Trigger: TTTGTCCACACTGGTCTCCAACTCCTGGGCTTGAGC...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCAGGCAGGTGGATCACTaGAGCCCAAGTGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: VARDQGGPLHLVGLAGVSRQVDH*SPSARP
Trigger: TGGTCTTGCACTTGGGCTCAAGTGATCCACCTGCCT...GGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCAGGCAGGAGAATAGCTaGAACCCGGGATGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVRQENS*NPGCRG
Trigger: ACCTCTGCATCCCGGGTTCAAGCTATTCTCCTGCCT...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTCGCATCAGGTACTCCTaGCCGCCCTTGATCATGTAC +
Preference number: 5 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPRIRYS*PPLIMY
Trigger: GTACATGATCAAGGGCGGCAAGGAGTACCTGATGCG...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429941.6
CDS TCA 90 bp ATTTGCTTTTGCCGCGGCCCGTGTTGTCAAAGAGGACCTTGTCGTTaGGGCCCAGGCGCAGCTCGGGCATGCCCGAGAGGAAGACTCGCA +
Preference number: 5 (lower is better)
Translates to: ICFCRGPCCQRGPCR*GPGAARACPRGRLA
Trigger: TGCGAGTCTTCCTCTCGGGCATGCCCGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCTTTGACAACACGGGCCGCGGCAAAAGCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
ENST00000591966.1
CDS GCA 90 bp TATACAGCATCCAGAACCCCTGTCCACTGCTGGCAACGCGGTGGCTaGAGCCCACCGCGTTACGTAGCAACAGGGCGGGGATTACCCACT +
Preference number: 5 (lower is better)
Translates to: YTASRTPVHCWQRGG*SPPRYVATGRGLPT
Trigger: AGTGGGTAATCCCCGCCCTGTTGCTACGTAACGCGGTGGGCTGCAGCCACCGCGTTGCCAGCAGTGGACAGGGGTTCTGGATGCTGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590945.5
CDS CCA 90 bp GGGATTACCCACTTAAGACCCCCGCCCGGTTACCCAGAAACAGGATaGGGCTCTCAGGTGAGGTCTACCGGCCTCTCTGCCTCACACCAG +
Preference number: 5 (lower is better)
Translates to: GITHLRPPPGYPETG*GSQVRSTGLSASHQ
Trigger: CTGGTGTGAGGCAGAGAGGCCGGTAGACCTCACCTGAGAGCCCCATCCTGTTTCTGGGTAACCGGGCGGGGGTCTTAAGTGGGTAATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590945.5
ENST00000591775.5
CDS CCA 90 bp AGGATATACAGCATCCAGAACCCCTGTCCACTGCTGGCAACGCGGTaGCTGCAGCCCACCGCGTTACGTAGCAACAGGGCGGGGATTACC +
Preference number: 5 (lower is better)
Translates to: RIYSIQNPCPLLATR*LQPTALRSNRAGIT
Trigger: GGTAATCCCCGCCCTGTTGCTACGTAACGCGGTGGGCTGCAGCCACCGCGTTGCCAGCAGTGGACAGGGGTTCTGGATGCTGTATATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590945.5
CDS-3UTR CAA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTTCATTCTTCCGATACTaGATGCCTTCGGACCGCCAG +
Preference number: 5 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPSFFRY*MPSDRQ
Trigger: CTGGCGGTCCGAAGGCATCAAGTATCGGAAGAATGA...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp TGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCTCATTCTTCCGATACTaGATGCCTTCGGACCGCCAG +
Preference number: 5 (lower is better)
Translates to: WPETREGPSIWWVWQVCPSFFRY*MPSDRQ
Trigger: CTGGCGGTCCGAAGGCATCAAGTATCGGAAGAATGA...GGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACTCGCTGCGCAGGACATaGCCGTTGGCGCTGACCAAG +
Preference number: 5 (lower is better)
Translates to: QLAGWQALAKLFGTWELNSLRRT*PLALTK
Trigger: CTTGGTCAGCGCCAACGGCAATGTCCTGCGCAGCGA...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000590756.5
CDS-3UTR CAA 90 bp TGGGTGACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTTTGCCGCGGCCCGTGTaGTCAAAGAGGACCTTGTCG +
Preference number: 5 (lower is better)
Translates to: WVTRGPALWTLSGKKSEALPRPV*SKRTLS
Trigger: CGACAAGGTCCTCTTTGACAACACGGGCCGCGGCAA...AGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp AGGACGGGTGACCAAGCGCAGACGTGGGTGACACGTGGCCCCGCTCTCTGGACCATCCATATCAAAGGCTaGACGTGGGTGTTGAGACGG +
Preference number: 5 (lower is better)
Translates to: RTGDQAQTWVTRGPALWTIHIKG*TWVLRR
Trigger: CCGTCTCAACACCCACGTCAAGCCTTTGATATGGAT...GGTCCAGAGAGCGGGGCCACGTGTCACCCACGTCTGCGCTTGGTCACCCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
CDS-3UTR CAA 90 bp GGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCCGCTTGAACTGGCTTTaGGCCTTGATCATGTACTCG +
Preference number: 5 (lower is better)
Translates to: GNKTTPLLAWRGWRFLRGRLNWL*ALIMYS
Trigger: CGAGTACATGATCAAGGCCAAAAGCCAGTTCAAGCG...GCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGGGTGAGTCGGCATCATaGGGCACGGGAATGTGGATC +
Preference number: 5 (lower is better)
Translates to: KWQQNDAPAGLARLALPSGESAS*GTGMWI
Trigger: GATCCACATTCCCGTGCCCAATGATGCCGACTCACC...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCTGGTGGGTCAATACTGATGGGGGCTTGCCCTCCTaGTCTTCGGCCTCCACACTA +
Preference number: 5 (lower is better)
Translates to: LRLASLTKPHLPWWVNTDGGLPS*SSASTL
Trigger: TAGTGTGGAGGCCGAAGACAAGGAGGGCAAGCCCCC...ATCAGTATTGACCCACCAGGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACACACTGATCGGGGGCTaGCCCTCCTTGTCTTCGGCC +
Preference number: 5 (lower is better)
Translates to: QLAGWQALAKLFGTWELNTLIGG*PSLSSA
Trigger: GGCCGAAGACAAGGAGGGCAAGCCCCCGATCAGTGT...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCGTTGGCCAAGCTTTTaGGTACCTGGGAGCTCAACA +
Preference number: 5 (lower is better)
Translates to: VARDQGGPLHLVGLAGVSRWPSF*VPGSST
Trigger: TGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACG...GGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp TGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCGTTGGCCAAGCTTTTaGGTACCTGGGAGCTCAACA +
Preference number: 5 (lower is better)
Translates to: WPETREGPSIWWVWQVCPRWPSF*VPGSST
Trigger: TGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACG...GGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCGAGTGGGCCATCAGTTaGGGGAGAGGTGGGGACAAG +
Preference number: 5 (lower is better)
Translates to: PSVGKSLRLASLTKPHLPEWAIS*GRGGDK
Trigger: CTTGTCCCCACCTCTCCCCAAACTGATGGCCCACTC...GGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCATATCCTCAAGGGATaGCTTCCAGGACTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: EAGASFVADATCSWLAGKHILKG*LPGLPL
Trigger: CAAGGGGAGTCCTGGAAGCAATCCCTTGAGGATATG...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCATGTCTGTCTGTCTGGTaGTCATGTCTGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: APAGLARLALPSWQMPPACLSVW*SCLKVM
Trigger: CATCACCTTCAGACATGACAACCAGACAGACAGACA...TGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS TCA 90 bp CCCACGATCTCGCTGCGCAGGACATTGCCGTTGGCGCTGACCGTGTaGCCCAGCCATCCCACTCCTGGGTATTTACCCAAGAGGTTGACA +
Preference number: 5 (lower is better)
Translates to: PTISLRRTLPLALTV*PSHPTPGYLPKRLT
Trigger: TGTCAACCTCTTGGGTAAATACCCAGGAGTGGGATGGCTGGGTCACACGGTCAGCGCCAACGGCAATGTCCTGCGCAGCGAGATCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444449.6
CDS-3UTR CAA 90 bp TTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTATGTGGATCTCCACGTaGTTGGCTGTTGACCGCCGC +
Preference number: 5 (lower is better)
Translates to: FVADATCSWLAGKRWPSFMWIST*LAVDRR
Trigger: GCGGCGGTCAACAGCCAACAACGTGGAGATCCACAT...AAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp TGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCACTCCCCACCGTCGTCTaGAACTTGGGTGAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: CSWLAGKRWPSFLVPGSSLPTVV*NLGESA
Trigger: TGCCGACTCACCCAAGTTCAAGACGACGGTGGGGAG...TGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTGCTGGCTGGCAAGCGTaGGCCAAGCTTTTTGGTACC +
Preference number: 5 (lower is better)
Translates to: GRCHLQLAGWQALAKLFGAGWQA*AKLFGT
Trigger: GGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGC...ACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACGTCACGCAGGAGGAGTaGGGACCACGCTGCATCAGA +
Preference number: 5 (lower is better)
Translates to: QMPPAAGWLASVGQAFWYVTQEE*GPRCIR
Trigger: TCTGATGCAGCGTGGTCCCAACTCCTCCTGCGTGAC...GTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGTGTCTGCAAACCAGATaGATATTACAAGCGTGGGGT +
Preference number: 5 (lower is better)
Translates to: PLLAWRGWRFLRGRCHLQCLQTR*ILQAWG
Trigger: ACCCCACGCTTGTAATATCAATCTGGTTTGCAGACA...CTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTAACATCTTGGCCTGGTaGTCTGCAAACCAGATTGAT +
Preference number: 5 (lower is better)
Translates to: DAPAGLARLALPSWQMPPNILAW*SANQID
Trigger: ATCAATCTGGTTTGCAGACAACCAGGCCAAGATGTT...AGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCTGCAGTAACACTATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: VARDQGGPLHLVGLAGVSCSNTI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATAGTGTTACTGCA...GGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAGCGCTAGGCCGGTTTTaGTTGTGTTTTGAGACGGAG +
Preference number: 5 (lower is better)
Translates to: ASFVADATCSWLAGKRWPALGRF*LCFETE
Trigger: CTCCGTCTCAAAACACAACAAAAACCGGCCTAGCGC...TGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGGCAAATCATCAATGCTaGATGGATTCTCGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: PLLAWRGWRFLRGRCHLQANHQC*MDSREH
Trigger: GTGCTCTCGAGAATCCATCAAGCATTGATGATTTGC...CTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS GCA 90 bp ATAGCCTGTGGGTCAGGATATACAGCATCCAGAACCCCTGTCCACTaGTGGCAACGCGGTGGCTGCAGCCCACCGCGTTACGTAGCAACA +
Preference number: 5 (lower is better)
Translates to: IACGSGYTASRTPVH*WQRGGCSPPRYVAT
Trigger: TGTTGCTACGTAACGCGGTGGGCTGCAGCCACCGCGTTGCCAGCAGTGGACAGGGGTTCTGGATGCTGTATATCCTGACCCACAGGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590945.5
CDS-3UTR CAA 90 bp TGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAGCGCTGACCAAGAGGTaGACAGACTCGATGACGTCC +
Preference number: 5 (lower is better)
Translates to: CSWLAGKRWPSFLVPGSSALTKR*TDSMTS
Trigger: GGACGTCATCGAGTCTGTCAACCTCTTGGTCAGCGC...TGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTAACTGGCTTTTGGCCTaGATCATGTACTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: PSWQMPPAAGWLASVGQANWLLA*IMYSMR
Trigger: CCGCATCGAGTACATGATCAAGGCCAAAAGCCAGTT...AGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCTGGTGGGTCAATACTGATGCTGTTGACCGCCGCTaGAACTGGCTTTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LRLASLTKPHLPWWVNTDAVDRR*NWLLAL
Trigger: CAAGGCCAAAAGCCAGTTCAAGCGGCGGTCAACAGC...ATCAGTATTGACCCACCAGGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGACCGTCGTCTTGAACTaGGGTGAGTCGGCATCATTG +
Preference number: 5 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRTVVLN*GESASL
Trigger: CAATGATGCCGACTCACCCAAGTTCAAGACGACGGT...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp ACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGAAGAAACGAGACTTCTaGAAGACCAGCCTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: TREGPSIWWVWQVCPLVLKKRDF*KTSLFW
Trigger: CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTT...CAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp AGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCAAAGAAACGAGACTTCTaGAAGACCAGCCTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: REGPSIWWVWQVCPLVLPKKRDF*KTSLFW
Trigger: CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTT...TGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTACCCCCTTCCTGTTTTaGCCTTTCAGAGATAACCAG +
Preference number: 5 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPTPFLF*PFRDNQ
Trigger: CTGGTTATCTCTGAAAGGCAAAAACAGGAAGGGGGT...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCTGGGGTTTCTCCTTGTaGGTCCGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PSVGKSLRLASLTKPHLPWGFSL*VRLVSN
Trigger: GTTTGAGACCAGCCGGACCAACAAGGAGAAACCCCA...GGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAACCTGCCACTAGCACTTaGGGAGGCCAGTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQPATST*GGQWGW
Trigger: CCACCCCCACTGGCCTCCCAAAGTGCTAGTGGCAGG...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CGTGGGTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAATCGCTGCGCAGGACATaGCCGTTGGCGCTGACCGTG +
Preference number: 5 (lower is better)
Translates to: RGWDMGTVRVTQTATNAQSLRRT*PLALTV
Trigger: CACGGTCAGCGCCAACGGCAATGTCCTGCGCAGCGA...TTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCACCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444449.6
CDS TCA 90 bp CTCGGGGACCCACTTAACGCTCCCCACCGTCGTCTTGAACTTGGGTaGGTCGGCATCATTGGGCACGGGAATGTGGATCTCCACGTTGTT +
Preference number: 5 (lower is better)
Translates to: LGDPLNAPHRRLELG*VGIIGHGNVDLHVV
Trigger: AACAACGTGGAGATCCACATTCCCGTGCCCAATGATGCCGACTCACCCAAGTTCAAGACGACGGTGGGGAGCGTTAAGTGGGTCCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
ENST00000590756.5
CDS-3UTR CAA 90 bp GGTGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCTACAGGTTGTTGTGTTaGATCCACATGAAACGGACC +
Preference number: 5 (lower is better)
Translates to: GGQRPGRAPPSGGFGRCVYRLLC*IHMKRT
Trigger: GGTCCGTTTCATGTGGATCAAACACAACAACCTGTA...GACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR CAA 90 bp GGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGGTGCTGCCACCAGGAGCAACCAGATACAGGTaGTTGTGTTTGATCCACATG +
Preference number: 5 (lower is better)
Translates to: GPSIWWVWQVCPLVLPPGATRYR*LCLIHM
Trigger: CATGTGGATCAAACACAACAACCTGTATCTGGTTGC...TCCTGGTGGCAGCACCAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR CAA 90 bp TGGGTGACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTACGCACGCGTTCTTCTaGGATGTGGCAACCAGATAC +
Preference number: 5 (lower is better)
Translates to: WVTRGPALWTLSGKKSEATHAFF*DVATRY
Trigger: GTATCTGGTTGCCACATCCAAGAAGAACGCGTGCGT...AGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGTCACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp GGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTTCATTCTTCCGATACTaGATGCCTTCGGACCGCCAG +
Preference number: 5 (lower is better)
Translates to: GRCHLQLAGWQALAKLFGSFFRY*MPSDRQ
Trigger: CTGGCGGTCCGAAGGCATCAAGTATCGGAAGAATGA...ACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACAGGAAGACTCGCATCTaGATGGAGCCCACGATCTCG +
Preference number: 5 (lower is better)
Translates to: QMPPAAGWLASVGQAFWYRKTRI*MEPTIS
Trigger: CGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCCT...GTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAGGATCCATATCAAAGGCTaGACGTGGGTGTTGAGACGG +
Preference number: 5 (lower is better)
Translates to: GKGLLRRVSTAEQMAWGRIHIKG*TWVLRR
Trigger: CCGTCTCAACACCCACGTCAAGCCTTTGATATGGAT...CCTTCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp AAATGGCAACAAAACGACGCCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGATCCATATCAAAGGCTaGACGTGGGTGTTGAGACGG +
Preference number: 5 (lower is better)
Translates to: KWQQNDAPAGLARLALPSIHIKG*TWVLRR
Trigger: CCGTCTCAACACCCACGTCAAGCCTTTGATATGGAT...CGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGGCGTCGTTTTGTTGCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CTGGGAAAGGGGCTTCTGAGACGAGTGTCGACGGCAGAGCAGATGGCCTGGGGAAACTGGCTTTTGGCCTaGATCATGTACTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: LGKGLLRRVSTAEQMAWGNWLLA*IMYSMR
Trigger: CCGCATCGAGTACATGATCAAGGCCAAAAGCCAGTT...TCCCCAGGCCATCTGCTCTGCCGTCGACACTCGTCTCAGAAGCCCCTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAACCCGAGGCCGGGGTGTaGGCTGCGACAGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: LFGTWELNSIKGCNLYTEPEAGV*AATAPH
Trigger: GTGAGGGGCTGTCGCAGCCAACACCCCGGCCTCGGG...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAAGAAACGAGACTTCTaGAAGACCAGCCTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: ASFVADATCSWLAGKRWPKKRDF*KTSLFW
Trigger: CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTT...TGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp TTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTCGTTGGCCAAGCTTTTaGGTACCTGGGAGCTCAACA +
Preference number: 5 (lower is better)
Translates to: FVADATCSWLAGKRWPSFRWPSF*VPGSST
Trigger: TGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACG...AAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCACCGAACGGTCGCCATTaGTATTTCATCTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: ARLALPSWQMPPAAGWLAPNGRH*YFIFFI
Trigger: TATGAAGAAGATGAAATACAAATGGCGACCGTTCGG...TGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAAGATGAACACCAGGATGTaGTCTAGTACTTCAGTTGCG +
Preference number: 5 (lower is better)
Translates to: PASTCKWPAAGAAGKEDKMNTRM*SSTSVA
Trigger: CGCAACTGAAGTACTAGACAACATCCTGGTGTTCAT...CTTGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CCCCTGCTGGCCTGGCGAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGACTGTAACCTCATTCTaGAAATACTTTTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: PLLAWRGWRFLRGRCHLQTVTSF*KYFCWV
Trigger: GACCCAGCAAAAGTATTTCAAGAATGAGGTTACAGT...CTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTCGCCAGGCCAGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACTACTCCTTGCCGCCCTaGATCATGTACTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: QLAGWQALAKLFGTWELNYSLPP*IMYSMR
Trigger: CCGCATCGAGTACATGATCAAGGGCGGCAAGGAGTA...GTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429941.6
CDS GCA 90 bp CTCTACACAGCTGTCTCAAGCAGTGTGAAGTGCTGCTCAACCAAGTaGTTGAAACCAGCTCGTTCCTCCGCCTGGCCCAACCCTGCCCTA +
Preference number: 5 (lower is better)
Translates to: LYTAVSSSVKCCSTK*LKPARSSAWPNPAL
Trigger: TAGGGCAGGGTTGGGCCAGGCGGAGGAACGAGCTGGTTTCAAGCACTTGGTTGAGCAGCACTTCACACTGCTTGAGACAGCTGTGTAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586461.1
CDS-3UTR CAA 90 bp CAGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAACCAGATACAGGTTGTaGTGTTTGATCCACATGAAA +
Preference number: 5 (lower is better)
Translates to: QVPASTCKWPAAGAAGKETRYRL*CLIHMK
Trigger: TTTCATGTGGATCAAACACAACAACCTGTATCTGGT...TTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp CCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCAACTGGCTTTTGGCCTaGATCATGTACTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: PSVGKSLRLASLTKPHLPNWLLA*IMYSMR
Trigger: CCGCATCGAGTACATGATCAAGGCCAAAAGCCAGTT...GGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAGACTTTTTCCCACTGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp CAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGTACACCGTCGTCTTGAACTaGGGTGAGTCGGCATCATTG +
Preference number: 5 (lower is better)
Translates to: QMPPAAGWLASVGQAFWYTVVLN*GESASL
Trigger: CAATGATGCCGACTCACCCAAGTTCAAGACGACGGT...GTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGACACTGATCGGGGGCTaGCCCTCCTTGTCTTCGGCC +
Preference number: 5 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLTLIGG*PSLSSA
Trigger: GGCCGAAGACAAGGAGGGCAAGCCCCCGATCAGTGT...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CAGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGTCTTATCTGATAAGTaGCTGGAAACTGAAGTCTCT +
Preference number: 5 (lower is better)
Translates to: QVPASTCKWPAAGAAGKEVLSDK*LETEVS
Trigger: AGAGACTTCAGTTTCCAGCAACTTATCAGATAAGAC...TTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp TGGCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCCTGCTGTTTCAAGTTaGCTTTCATGCACGTGTTTT +
Preference number: 5 (lower is better)
Translates to: WPETREGPSIWWVWQVCPPAVSS*LSCTCF
Trigger: AAAACACGTGCATGAAAGCAAACTTGAAACAGCAGG...GGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GCCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTTTAAAATCTCTCATATaGGCTGGGCATGGTGACTCA +
Preference number: 5 (lower is better)
Translates to: ARDQGGPLHLVGLAGVSPLKSLI*AGHGDS
Trigger: TGAGTCACCATGCCCAGCCAATATGAGAGATTTTAA...AGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp TTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTAAGAAACGAGACTTCTaGAAGACCAGCCTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: FVADATCSWLAGKRWPSFKKRDF*KTSLFW
Trigger: CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTT...AAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GAGGCTGGCGCTTCCTTCGTGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGTTGAAGGACTTTTGGTaGCTTTCCAATTTCCTGCTA +
Preference number: 5 (lower is better)
Translates to: EAGASFVADATCSWLAGKLKDFW*LSNFLL
Trigger: TAGCAGGAAATTGGAAAGCAACCAAAAGTCCTTCAA...CTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCACGAAGGAAGCGCCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CCAGAGACCAGGGAGGGCCCCTCCATCTGGTGGGTTTGGCAGGTGTGTCCCCTGTTTAATCTCTTAGTGTaGCTGTTAGGATCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: PETREGPSIWWVWQVCPLFNLLV*LLGSSL
Trigger: CAGGGAAGATCCTAACAGCAACACTAAGAGATTAAA...CAGGGGACACACCTGCCAAACCCACCAGATGGAGGGGCCCTCCCTGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp AGGTGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGGGATATCACAGGATTTaGTATTTCAGTTCAATCCGA +
Preference number: 5 (lower is better)
Translates to: RCQPRRVNGPLRALPGRKGYHRI*YFSSIR
Trigger: TCGGATTGAACTGAAATACAAAATCCTGTGATATCC...CTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACTCGCTGCGCAGGACATaGCCGTTGGCGCTGACCAAG +
Preference number: 5 (lower is better)
Translates to: AKLFGTWELNSIKGCNLYSLRRT*PLALTK
Trigger: CTTGGTCAGCGCCAACGGCAATGTCCTGCGCAGCGA...GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACGGGGGCTTGCCCTCCTaGTCTTCGGCCTCCACACTA +
Preference number: 5 (lower is better)
Translates to: HPSPETDFRGKETRLLEDGGLPS*SSASTL
Trigger: TAGTGTGGAGGCCGAAGACAAGGAGGGCAAGCCCCC...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACAAGATATTTCTCTATATATaGGTGCATGGACTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: PASTCKWPAAGAAGKEDKIFLYI*VHGLLR
Trigger: CCTGAGAAGTCCATGCACCAATATATAGAGAAATAT...CTTGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp TGCCAGCCTCGACGTGTAAATGGCCCGCTGCGGGCGCTGCCGGGAAGGAAGACACCCAGTTCTCATTTTTaGGTTTGTGTTAGATACTTG +
Preference number: 5 (lower is better)
Translates to: CQPRRVNGPLRALPGRKTPSSHF*VCVRYL
Trigger: CAAGTATCTAACACAAACCAAAAAATGAGAACTGGG...TGTCTTCCTTCCCGGCAGCGCCCGCAGCGGGCCATTTACACGTCGAGGCTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGGCAAAGACCGCGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWAKTAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTTTGC...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS TCA 90 bp GGCATCATTGGGCACGGGAATGTGGATCTCCACGTTGTTGGCTGTTaGCCGCCGCTTGAACTGGCTTTTGGCCTTGATCATGTACTCGAT +
Preference number: 5 (lower is better)
Translates to: GIIGHGNVDLHVVGC*PPLELAFGLDHVLD
Trigger: ATCGAGTACATGATCAAGGCCAAAAGCCAGTTCAAGCGGCGGTCAACAGCCAACAACGTGGAGATCCACATTCCCGTGCCCAATGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
ENST00000590756.5
CDS-3UTR CAA 90 bp GTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGACAGCGCTGACCAAGAGGTaGACAGACTCGATGACGTCC +
Preference number: 5 (lower is better)
Translates to: VGHGDSEGNTNSNECTKTALTKR*TDSMTS
Trigger: GGACGTCATCGAGTCTGTCAACCTCTTGGTCAGCGC...TGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCGCAGGACATTGCCGTaGGCGCTGACCAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: HPSPETDFRGKETRLLEDRRTLP*ALTKRL
Trigger: CAACCTCTTGGTCAGCGCCAACGGCAATGTCCTGCG...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGACATCCACGGATTTGCTTTaGCCGCGGCCCGTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: VGHGDSEGNTNSNECTKTSTDLL*PRPVLS
Trigger: TGACAACACGGGCCGCGGCAAAAGCAAATCCGTGGA...TGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGGCTGGGGCAGCGTCATaGACTGAGATGGGGAAGACC +
Preference number: 5 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWAGAAS*TEMGKT
Trigger: GGTCTTCCCCATCTCAGTCAATGACGCTGCCCCAGC...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACGCCGAGATTTCGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: AKLFGTWELNSIKGCNLYAEISP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCGAAATCTCGGC...GTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCTGGTGGGTCAATACTGATAATAGCATAGTGACCTaGAAAGGCATGAACACCAGG +
Preference number: 5 (lower is better)
Translates to: LRLASLTKPHLPWWVNTDNSIVT*KGMNTR
Trigger: CCTGGTGTTCATGCCTTTCAAGGTCACTATGCTATT...ATCAGTATTGACCCACCAGGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp TGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGCTTCAACTAGCAGCTTaGCTTCATTTACACCTGTTG +
Preference number: 5 (lower is better)
Translates to: WQMPPAAGWLASVGQAFWLQLAA*LHLHLL
Trigger: CAACAGGTGTAAATGAAGCAAAGCTGCTAGTTGAAG...CCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGACGCACGCGTTCTTCTaGGATGTGGCAACCAGATAC +
Preference number: 5 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLTHAFF*DVATRY
Trigger: GTATCTGGTTGCCACATCCAAGAAGAACGCGTGCGT...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR CAA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGGCGCTGACCAAGAGGTaGACAGACTCGATGACGTCC +
Preference number: 5 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWALTKR*TDSMTS
Trigger: GGACGTCATCGAGTCTGTCAACCTCTTGGTCAGCGC...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTAAGAGGACCTTGTCGTaGAGGCCCAGGCGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFKRTLS*RPRRSS
Trigger: CGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCTT...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCGCTGTTGACCGCCGCTaGAACTGGCTTTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFAVDRR*NWLLAL
Trigger: CAAGGCCAAAAGCCAGTTCAAGCGGCGGTCAACAGC...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp AGGGTAACACAAACAGCAACGAATGCACAAAGACAAGTTCCAGGAACACCCATACCGCCCGGGAAGGACTaGATGGACCACACGATCTCG +
Preference number: 5 (lower is better)
Translates to: RVTQTATNAQRQVPGTPIPPGKD*MDHTIS
Trigger: CGAGATCGTGTGGTCCATCAAGTCCTTCCCGGGCGG...TATGGGTGTTCCTGGAACTTGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGGCTGGCTGGCAAGCGTaGGCCAAGCTTTTTGGTACC +
Preference number: 5 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWAGWQA*AKLFGT
Trigger: GGTACCAAAAAGCTTGGCCAACGCTTGCCAGCCAGC...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp ACACGTGGCCCCGCTCTCTGGACCCTCAGTGGGAAAAAGTCTGAGGCTGGCGTCTGCAAATTATTTGCCTaGTTGGATGTTGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: TRGPALWTLSGKKSEAGVCKLFA*LDVVTA
Trigger: AGCTGTTACAACATCCAACAAGGCAAATAATTTGCA...GACGCCAGCCTCAGACTTTTTCCCACTGAGGGTCCAGAGAGCGGGGCCACGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGACATACAACGGTGCCATCTaGACTCACTGCGAGCGCCAT +
Preference number: 5 (lower is better)
Translates to: VGHGDSEGNTNSNECTKTYNGAI*THCERH
Trigger: ATGGCGCTCGCAGTGAGTCAAGATGGCACCGTTGTA...TGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGAACACCCTCAGTACCTaGCCCTTCAGGTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLNTLST*PFRSST
Trigger: CGTGCTGGACCTGAAGGGCAAGGTACTGAGGGTGTT...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590756.5
CDS-3UTR CAA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCAGGAAGACTCGCATCTaGATGGAGCCCACGATCTCG +
Preference number: 5 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFRKTRI*MEPTIS
Trigger: CGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCCT...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTTTGCCGCGGCCCGTGTaGTCAAAGAGGACCTTGTCG +
Preference number: 5 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFLPRPV*SKRTLS
Trigger: CGACAAGGTCCTCTTTGACAACACGGGCCGCGGCAA...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAATGGATCTCCACGTTGTaGGCTGTTGACCGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: LFGTWELNSIKGCNLYTEWISTL*AVDRRL
Trigger: CAAGCGGCGGTCAACAGCCAACAACGTGGAGATCCA...TTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp TGGCAGATGCCACCTGCAGCTGGCTGGCTGGCAAGCGTTGGCCAAGCTTTTTGGCATGGATGTGGAGGGTaGACTGTAAATATATATATG +
Preference number: 5 (lower is better)
Translates to: WQMPPAAGWLASVGQAFWHGCGG*TVNIYM
Trigger: CATATATATATTTACAGTCAACCCTCCACATCCATG...CCAAAAAGCTTGGCCAACGCTTGCCAGCCAGCCAGCTGCAGGTGGCATCTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACTCATTCTTCCGATACTaGATGCCTTCGGACCGCCAG +
Preference number: 5 (lower is better)
Translates to: HPSPETDFRGKETRLLEDSFFRY*MPSDRQ
Trigger: CTGGCGGTCCGAAGGCATCAAGTATCGGAAGAATGA...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTGCTGTTGACCGCCGCTaGAACTGGCTTTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFAVDRR*NWLLAL
Trigger: CAAGGCCAAAAGCCAGTTCAAGCGGCGGTCAACAGC...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTATGTGGATCTCCACGTaGTTGGCTGTTGACCGCCGC +
Preference number: 5 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFMWIST*LAVDRR
Trigger: GCGGCGGTCAACAGCCAACAACGTGGAGATCCACAT...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCACCGTCGTCTTGAACTaGGGTGAGTCGGCATCATTG +
Preference number: 5 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFTVVLN*GESASL
Trigger: CAATGATGCCGACTCACCCAAGTTCAAGACGACGGT...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp CTGAGGCTGGCGTCTCTCACCAAACCCCACCTCCCCTGGTGGGTCAATACTGATCATCTCGTTAGACTTTaGCTGGATATATATAGATCC +
Preference number: 5 (lower is better)
Translates to: LRLASLTKPHLPWWVNTDHLVRL*LDIYRS
Trigger: GGATCTATATATATCCAGCAAAAGTCTAACGAGATG...ATCAGTATTGACCCACCAGGGGAGGTGGGGTTTGGTGAGAGACGCCAGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GTGGTCCCTTTTCCTATTGAAGGACTTTTGGTTGCTTTCCAATTTCCTGCTATCCTGGCCACGATCTCTTaGCATGTGGCTGCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: VVPFPIEGLLVAFQFPAILATIS*HVAAPQ
Trigger: CTGGGGAGCAGCCACATGCAAAGAGATCGTGGCCAG...GATAGCAGGAAATTGGAAAGCAACCAAAAGTCCTTCAATAGGAAAAGGGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCTCCACGGATTTGCTTTaGCCGCGGCCCGTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: WELNSIKGCNLYTEKFHISTDLL*PRPVLS
Trigger: TGACAACACGGGCCGCGGCAAAAGCAAATCCGTGGA...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GCTCTAGTTGAATTCATTTTCACTGCTGTAATCTCTTGCATGAATGGACTACAGTCCAGCTCCACGGATTaGCTTTTGCCGCGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: ALVEFIFTAVISCMNGLQSSSTD*LLPRPV
Trigger: CACGGGCCGCGGCAAAAGCAAATCCGTGGAGCTGGA...CTGTAGTCCATTCATGCAAGAGATTACAGCAGTGAAAATGAATTCAACTAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGATCCATATCAAAGGCTaGACGTGGGTGTTGAGACGG +
Preference number: 5 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWIHIKG*TWVLRR
Trigger: CCGTCTCAACACCCACGTCAAGCCTTTGATATGGAT...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGCGCTTGAACTGGCTTTaGGCCTTGATCATGTACTCG +
Preference number: 5 (lower is better)
Translates to: ETDFRGKETRLLEDQPLLRLNWL*ALIMYS
Trigger: CGAGTACATGATCAAGGCCAAAAGCCAGTTCAAGCG...CAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp TGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCACATCGGTGAGTCGGCATCATaGGGCACGGGAATGTGGATC +
Preference number: 5 (lower is better)
Translates to: WELNSIKGCNLYTEKFHIGESAS*GTGMWI
Trigger: GATCCACATTCCCGTGCCCAATGATGCCGACTCACC...GATGTGAAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp GTGGGACATGGGGACAGTGAGGGTAACACAAACAGCAACGAATGCACAAAGACAGCAACCAGATACAGGTaGTTGTGTTTGATCCACATG +
Preference number: 5 (lower is better)
Translates to: VGHGDSEGNTNSNECTKTATRYR*LCLIHM
Trigger: CATGTGGATCAAACACAACAACCTGTATCTGGTTGC...TGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCTCACTGTCCCCATGTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291439.8
ENST00000444449.6
CDS-3UTR CAA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACTACAGGTTGTTGTGTTaGATCCACATGAAACGGACC +
Preference number: 5 (lower is better)
Translates to: HPSPETDFRGKETRLLEDYRLLC*IHMKRT
Trigger: GGTCCGTTTCATGTGGATCAAACACAACAACCTGTA...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR CAA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGGCAACCAGATACAGGTaGTTGTGTTTGATCCACATG +
Preference number: 5 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWATRYR*LCLIHM
Trigger: CATGTGGATCAAACACAACAACCTGTATCTGGTTGC...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR CAA 90 bp GGTACCTGGGAGCTCAACAGCATAAAAGGCTGTAACCTCTACACGGAAAAATTTCGCTTGAACTGGCTTTaGGCCTTGATCATGTACTCG +
Preference number: 5 (lower is better)
Translates to: GTWELNSIKGCNLYTEKFRLNWL*ALIMYS
Trigger: CGAGTACATGATCAAGGCCAAAAGCCAGTTCAAGCG...AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000590756.5
CDS-3UTR CAA 90 bp TACGAATTTAGGTTTGTGTATCATGCTTTGGACTCAACGGTTTCCTGGATCTTATGGATCTCCACGTTGTaGGCTGTTGACCGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: YEFRFVYHALDSTVSWILWISTL*AVDRRL
Trigger: CAAGCGGCGGTCAACAGCCAACAACGTGGAGATCCA...TAAGATCCAGGAAACCGTTGAGTCCAAAGCATGATACACAAACCTAAATTCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp GCAAGCGTTGGCCAAGCTTTTTGGTACCTGGGAGCTCAACAGCATAAAAGGCTGCTGTCCAATTGCTCTTaGGAGAGACATTTTAATCTC +
Preference number: 5 (lower is better)
Translates to: ASVGQAFWYLGAQQHKRLLSNCS*ERHFNL
Trigger: GAGATTAAAATGTCTCTCCAAAGAGCAATTGGACAG...CAGCCTTTTATGCTGTTGAGCTCCCAGGTACCAAAAAGCTTGGCCAACGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp CTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCCACACACAGCCCATTTaGTTAGGTTCTCTTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LKLTSGAKKRDFLKTSLFHTQPI*LGSLFL
Trigger: CAGAAAAAGAGAACCTAACAAAATGGGCTGTGTGTG...GAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp AGGGTAACACAAACAGCAACGAATGCACAAAGACAAGTTCCAGGAACACCCATAATGCCCGGCCCCAAGTaGTTAATTCCTATGACTACA +
Preference number: 5 (lower is better)
Translates to: RVTQTATNAQRQVPGTPIMPGPK*LIPMTT
Trigger: TGTAGTCATAGGAATTAACAACTTGGGGCCGGGCAT...TATGGGTGTTCCTGGAACTTGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp AGGGTAACACAAACAGCAACGAATGCACAAAGACAAGTTCCAGGAACACCCATATATTTACCCAAGAGGTaGACAGACTCGATGACGTCC +
Preference number: 5 (lower is better)
Translates to: RVTQTATNAQRQVPGTPIYLPKR*TDSMTS
Trigger: GGACGTCATCGAGTCTGTCAACCTCTTGGGTAAATA...TATGGGTGTTCCTGGAACTTGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444449.6
CDS-3UTR CAA 90 bp CATCCTTCCCCTGAAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACACCAGATACAGGTTGTaGTGTTTGATCCACATGAAA +
Preference number: 5 (lower is better)
Translates to: HPSPETDFRGKETRLLEDTRYRL*CLIHMK
Trigger: TTTCATGTGGATCAAACACAACAACCTGTATCTGGT...GTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTTCAGGGGAAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
CDS-3UTR CAA 90 bp CAAATTATTTGCCTTGTTGGATGTTGTAACAGCTCTGTCTTAACAGCATTTTGCAGGAAGACTCGCATCTaGATGGAGCCCACGATCTCG +
Preference number: 5 (lower is better)
Translates to: QIICLVGCCNSSVLTAFCRKTRI*MEPTIS
Trigger: CGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCCT...GCAAAATGCTGTTAAGACAGAGCTGTTACAACATCCAACAAGGCAAATAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp AGTGTTGCTGTTAGGATCTTCCCTGAGTCTGATATGTTCTGTGGTTCGACTATGTCTGTCATAAACATCTaGGCCTGGTTGTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: SVAVRIFPESDMFCGSTMSVINI*AWLSAN
Trigger: GTTTGCAGACAACCAGGCCAAGATGTTTATGACAGA...CATAGTCGAACCACAGAACATATCAGACTCAGGGAAGATCCTAACAGCAACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp AAACTGACTTCAGGGGCAAAGAAACGAGACTTCTTGAAGACCAGCCTCTTCTGGCCTATTGAAGGACTTTaGGTTGCTTTCCAATTTCCT +
Preference number: 5 (lower is better)
Translates to: KLTSGAKKRDFLKTSLFWPIEGL*VAFQFP
Trigger: AGGAAATTGGAAAGCAACCAAAAGTCCTTCAATAGG...CCAGAAGAGGCTGGTCTTCAAGAAGTCTCGTTTCTTTGCCCCTGAAGTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp AGGGTAACACAAACAGCAACGAATGCACAAAGACAAGTTCCAGGAACACCCATATGCTTTTATTTCTTCTaGCATCATGCCCTTCCGTCT +
Preference number: 5 (lower is better)
Translates to: RVTQTATNAQRQVPGTPICFYFF*HHALPS
Trigger: AGACGGAAGGGCATGATGCAAGAAGAAATAAAAGCA...TATGGGTGTTCCTGGAACTTGTCTTTGTGCATTCGTTGCTGTTTGTGTTACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp TACACAAAAGAGTGTGCAAATCATCAATGCTTGATGGATTCTCGAGAGCACACCTTTTCCCGCTCAATGTaGTTTAAGTTGTATTCTGAG +
Preference number: 5 (lower is better)
Translates to: YTKECANHQCLMDSREHTFSRSM*FKLYSE
Trigger: CTCAGAATACAACTTAAACAACATTGAGCGGGAAAA...GGTGTGCTCTCGAGAATCCATCAAGCATTGATGATTTGCACACTCTTTTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS-3UTR CAA 90 bp TACGAATTTAGGTTTGTGTATCATGCTTTGGACTCAACGGTTTCCTGGATCTTAACCAGATACAGGTTGTaGTGTTTGATCCACATGAAA +
Preference number: 5 (lower is better)
Translates to: YEFRFVYHALDSTVSWILTRYRL*CLIHMK
Trigger: TTTCATGTGGATCAAACACAACAACCTGTATCTGGT...TAAGATCCAGGAAACCGTTGAGTCCAAAGCATGATACACAAACCTAAATTCGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291439.8
CDS CCA 72 bp GACGGCGCTGGCGGACATGATGGCTGCAGGAGGCGGTaGGGACTGCTGGGCGTTGAGCAAGGCCGGGCGCCG +
Preference number: 6 (lower is better)
Translates to: DGAGGHDGCRRR*GLLGVEQGRAP
Trigger: CGGCGCCCGGCCTTGCTCAACGCCCAGCAGTCCCCACCGCCTCCTGCAGCCATCATGTCCGCCAGCGCCGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590263.5
CDS TCA 72 bp CCTTCAGGTCCAGCACGTAGACGGCGCTGGCGGACATaGTGGCTGCAGGAGGCCTCGGCAGCGGCCGAGGGC +
Preference number: 6 (lower is better)
Translates to: PSGPARRRRWRT*WLQEASAAAEG
Trigger: GCCCTCGGCCGCTGCCGAGGCCTCCTGCAGCCATCATGTCCGCCAGCGCCGTCTACGTGCTGGACCTGAAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000589822.5
ENST00000589991.1
ENST00000590756.5
CDS TCA 72 bp TGCCGCGGCCCGTGTTGTCAAAGAGGACCTTGTCGTTaGGGCCCAGGCGCAGCTCGGGCATGCCCGAGAGGA +
Preference number: 6 (lower is better)
Translates to: CRGPCCQRGPCR*GPGAARACPRG
Trigger: TCCTCTCGGGCATGCCCGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCTTTGACAACACGGGCCGCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000590756.5
ENST00000591966.1
CDS GCA 72 bp TCCAGAACCCCTGTCCACTGCTGGCAACGCGGTGGCTaGAGCCCACCGCGTTACGTAGCAACAGGGCGGGGA +
Preference number: 6 (lower is better)
Translates to: SRTPVHCWQRGG*SPPRYVATGRG
Trigger: TCCCCGCCCTGTTGCTACGTAACGCGGTGGGCTGCAGCCACCGCGTTGCCAGCAGTGGACAGGGGTTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590945.5
CDS CAA 90 bp AGGCCCAGGCGCAGCTCGGGCATGCCCGAGAGGAAGACTCGCATCTaGATGGAGCCCACGATCTCGCTGCGCAGGACATTGCCGTTGGCG +
Preference number: 6 (lower is better)
Translates to: RPRRSSGMPERKTRI*MEPTISLRRTLPLA
Trigger: CGCCAACGGCAATGTCCTGCGCAGCGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCCTCTCGGGCATGCCCGAGCTGCGCCTGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000586461.1
ENST00000590756.5
ENST00000591966.1
CDS CCA 72 bp AGCATCCAGAACCCCTGTCCACTGCTGGCAACGCGGTaGCTGCAGCCCACCGCGTTACGTAGCAACAGGGCG +
Preference number: 6 (lower is better)
Translates to: SIQNPCPLLATR*LQPTALRSNRA
Trigger: CGCCCTGTTGCTACGTAACGCGGTGGGCTGCAGCCACCGCGTTGCCAGCAGTGGACAGGGGTTCTGGATGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590945.5
CDS CAA 72 bp GGGCAGGGCCCTTGGCAAGGGTACTCACGGCCCGTGTaGTCAAAGAGGACCTTGTCGTTGAGGCCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: GQGPWQGYSRPV*SKRTLSLRPRR
Trigger: GCGCCTGGGCCTCAACGACAAGGTCCTCTTTGACAACACGGGCCGTGAGTACCCTTGCCAAGGGCCCTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586461.1
CDS TCA 72 bp ACTCACGGCCCGTGTTGTCAAAGAGGACCTTGTCGTTaGGGCCCAGGCGCAGCTCGGGCATGCCCGAGAGGA +
Preference number: 6 (lower is better)
Translates to: THGPCCQRGPCR*GPGAARACPRG
Trigger: TCCTCTCGGGCATGCCCGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCTTTGACAACACGGGCCGTGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586461.1
CDS TCA 72 bp CCCAACCCTGCCCTAGGCTGTAATGTGTGTGCCTGGTaGGGCCATCCTCATGGGCAGGGCCCTTGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: PNPALGCNVCAW*GHPHGQGPWQG
Trigger: CCCTTGCCAAGGGCCCTGCCCATGAGGATGGCCTCACCAGGCACACACATTACAGCCTAGGGCAGGGTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586461.1
CDS TCA 72 bp GCAGCTCGGGCATGCCCGAGAGGAAGACTCGCATCTTaGTGGAGCCCACGATCTCGCTGCGCAGGACATTGC +
Preference number: 6 (lower is better)
Translates to: AARACPRGRLAS*WSPRSRCAGHC
Trigger: GCAATGTCCTGCGCAGCGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCCTCTCGGGCATGCCCGAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000586461.1
ENST00000590756.5
ENST00000591966.1
CDS GCA 72 bp GGGTCAGGATATACAGCATCCAGAACCCCTGTCCACTaGTGGCAACGCGGTGGCTGCAGCCCACCGCGTTAC +
Preference number: 6 (lower is better)
Translates to: GSGYTASRTPVH*WQRGGCSPPRY
Trigger: GTAACGCGGTGGGCTGCAGCCACCGCGTTGCCAGCAGTGGACAGGGGTTCTGGATGCTGTATATCCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590945.5
CDS CAA 72 bp CGCAGCTCGGGCATGCCCGAGAGGAAGACTCGCATCTaGATGGAGCCCACGATCTCGCTGCGCAGGACATTG +
Preference number: 6 (lower is better)
Translates to: RSSGMPERKTRI*MEPTISLRRTL
Trigger: CAATGTCCTGCGCAGCGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCCTCTCGGGCATGCCCGAGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000586461.1
ENST00000590756.5
ENST00000591966.1
CDS CAA 72 bp GTGTGCCTGGTGAGGCCATCCTCATGGGCAGGGCCCTaGGCAAGGGTACTCACGGCCCGTGTTGTCAAAGAG +
Preference number: 6 (lower is better)
Translates to: VCLVRPSSWAGP*ARVLTARVVKE
Trigger: CTCTTTGACAACACGGGCCGTGAGTACCCTTGCCAAGGGCCCTGCCCATGAGGATGGCCTCACCAGGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586461.1
CDS TCA 72 bp TCGCTGCGCAGGACATTGCCGTTGGCGCTGACCGTGTaGCCCAGCCATCCCACTCCTGGGTATTTACCCAAG +
Preference number: 6 (lower is better)
Translates to: SLRRTLPLALTV*PSHPTPGYLPK
Trigger: CTTGGGTAAATACCCAGGAGTGGGATGGCTGGGTCACACGGTCAGCGCCAACGGCAATGTCCTGCGCAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444449.6
CDS TCA 72 bp TTGCTCTCCCGCCTGTGTCAGGGCGCCCACTCCCGCTaGAGGTTCGTATTTACTGAAGTCCACAGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LLSRLCQGAHSR*RFVFTEVHRWP
Trigger: AGGCCACCTGTGGACTTCAGTAAATACGAACCTTCAGCGGGAGTGGGCGCCCTGACACAGGCGGGAGAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589822.5
ENST00000590945.5
CDS CCA 72 bp TCAGGATATACAGCATCCAGAACCCCTGTCCACTGCTaGCAACGCGGTGGCTGCAGCCCACCGCGTTACGTA +
Preference number: 6 (lower is better)
Translates to: SGYTASRTPVHC*QRGGCSPPRYV
Trigger: TACGTAACGCGGTGGGCTGCAGCCACCGCGTTGCCAGCAGTGGACAGGGGTTCTGGATGCTGTATATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590945.5
CDS CAA 72 bp ATCTCGAACTTGACACTGATCGGGGGCTTGCCCTCCTaGTCTTCGGCCTCCACACTAGGCAGGCCGAAGTGG +
Preference number: 6 (lower is better)
Translates to: ISNLTLIGGLPS*SSASTLGRPKW
Trigger: CCACTTCGGCCTGCCTAGTGTGGAGGCCGAAGACAAGGAGGGCAAGCCCCCGATCAGTGTCAAGTTCGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000586543.1
ENST00000590756.5
CDS CAA 90 bp TACACAGCTGTCTCAAGCAGTGTGAAGTGCTGCTCAACCAAGTGCTaGAAACCAGCTCGTTCCTCCGCCTGGCCCAACCCTGCCCTAGGC +
Preference number: 6 (lower is better)
Translates to: YTAVSSSVKCCSTKC*KPARSSAWPNPALG
Trigger: GCCTAGGGCAGGGTTGGGCCAGGCGGAGGAACGAGCTGGTTTCAAGCACTTGGTTGAGCAGCACTTCACACTGCTTGAGACAGCTGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586461.1
CDS CCA 72 bp CCAAACCCCACCTCCCCTGGTGGGTCAATACTGATCTaGCTGAGTGACAGCATCTGGATGCCGGAGGTAGTG +
Preference number: 6 (lower is better)
Translates to: PNPTSPGGSILI*LSDSIWMPEVV
Trigger: CACTACCTCCGGCATCCAGATGCTGTCACTCAGCCAGATCAGTATTGACCCACCAGGGGAGGTGGGGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586543.1
CDS CAA 72 bp ATCTTGATGGAGCCCACGATCTCGCTGCGCAGGACATaGCCGTTGGCGCTGACCAAGAGGTTGACAGACTCG +
Preference number: 6 (lower is better)
Translates to: ILMEPTISLRRT*PLALTKRLTDS
Trigger: CGAGTCTGTCAACCTCTTGGTCAGCGCCAACGGCAATGTCCTGCGCAGCGAGATCGTGGGCTCCATCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000586461.1
ENST00000590756.5
ENST00000591966.1
CDS TCA 72 bp CCACTTAACGCTCCCCACCGTCGTCTTGAACTTGGGTaGGTCGGCATCATTGGGCACGGGAATGTGGATCTC +
Preference number: 6 (lower is better)
Translates to: PLNAPHRRLELG*VGIIGHGNVDL
Trigger: GAGATCCACATTCCCGTGCCCAATGATGCCGACTCACCCAAGTTCAAGACGACGGTGGGGAGCGTTAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
ENST00000590756.5
CDS GCA 72 bp GCTGTCTCAAGCAGTGTGAAGTGCTGCTCAACCAAGTaGTTGAAACCAGCTCGTTCCTCCGCCTGGCCCAAC +
Preference number: 6 (lower is better)
Translates to: AVSSSVKCCSTK*LKPARSSAWPN
Trigger: GTTGGGCCAGGCGGAGGAACGAGCTGGTTTCAAGCACTTGGTTGAGCAGCACTTCACACTGCTTGAGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586461.1
CDS CCA 72 bp GTTGGCGCTGACCGTGTGACCCAGCCATCCCACTCCTaGGTATTTACCCAAGAGGTTGACAGACTCGATGAC +
Preference number: 6 (lower is better)
Translates to: VGADRVTQPSHS*VFTQEVDRLDD
Trigger: GTCATCGAGTCTGTCAACCTCTTGGGTAAATACCCAGGAGTGGGATGGCTGGGTCACACGGTCAGCGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444449.6
CDS CAA 72 bp GCATCATTGGGCACGGGAATGTGGATCTCCACGTTGTaGGCTGTTGACCGCCGCTTGAACTGGCTTTTGGCC +
Preference number: 6 (lower is better)
Translates to: ASLGTGMWISTL*AVDRRLNWLLA
Trigger: GGCCAAAAGCCAGTTCAAGCGGCGGTCAACAGCCAACAACGTGGAGATCCACATTCCCGTGCCCAATGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
ENST00000590756.5
CDS CAA 72 bp GTCTCAAGCAGTGTGAAGTGCTGCTCAACCAAGTGCTaGAAACCAGCTCGTTCCTCCGCCTGGCCCAACCCT +
Preference number: 6 (lower is better)
Translates to: VSSSVKCCSTKC*KPARSSAWPNP
Trigger: AGGGTTGGGCCAGGCGGAGGAACGAGCTGGTTTCAAGCACTTGGTTGAGCAGCACTTCACACTGCTTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586461.1
CDS CAA 90 bp GGTGAGTCGGCATCATTGGGCACGGGAATGTGGATCTCCACGTTGTaGGCTGTTGACCGCCGCTTGAACTGGCTTTTGGCCTTGATCATG +
Preference number: 6 (lower is better)
Translates to: GESASLGTGMWISTL*AVDRRLNWLLALIM
Trigger: CATGATCAAGGCCAAAAGCCAGTTCAAGCGGCGGTCAACAGCCAACAACGTGGAGATCCACATTCCCGTGCCCAATGATGCCGACTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
ENST00000590756.5
CDS TCA 72 bp GGGCACGGGAATGTGGATCTCCACGTTGTTGGCTGTTaGCCGCCGCTTGAACTGGCTTTTGGCCTTGATCAT +
Preference number: 6 (lower is better)
Translates to: GHGNVDLHVVGC*PPLELAFGLDH
Trigger: ATGATCAAGGCCAAAAGCCAGTTCAAGCGGCGGTCAACAGCCAACAACGTGGAGATCCACATTCCCGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
ENST00000590756.5
CDS CCA 72 bp TCCTTGCCGCCCTTGATCATGTACTCGATGCGGCTGTaGGAGTGCTTCTCGATCACCGACTCGATCCATATC +
Preference number: 6 (lower is better)
Translates to: SLPPLIMYSMRL*ECFSITDSIHI
Trigger: GATATGGATCGAGTCGGTGATCGAGAAGCACTCCCACAGCCGCATCGAGTACATGATCAAGGGCGGCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429941.6
CDS CAA 72 bp TCGGCATCATTGGGCACGGGAATGTGGATCTCCACGTaGTTGGCTGTTGACCGCCGCTTGAACTGGCTTTTG +
Preference number: 6 (lower is better)
Translates to: SASLGTGMWIST*LAVDRRLNWLL
Trigger: CAAAAGCCAGTTCAAGCGGCGGTCAACAGCCAACAACGTGGAGATCCACATTCCCGTGCCCAATGATGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
ENST00000590756.5
CDS CCA 72 bp TGGCTTTTGGCCTTGATCATGTACTCGATGCGGCTGTaGGAGTGCTTCTCGATCACCGACTCGATCCATATC +
Preference number: 6 (lower is better)
Translates to: WLLALIMYSMRL*ECFSITDSIHI
Trigger: GATATGGATCGAGTCGGTGATCGAGAAGCACTCCCACAGCCGCATCGAGTACATGATCAAGGCCAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
ENST00000590756.5
CDS CAA 72 bp CCCAGCCATCCCACTCCTGGGTATTTACCCAAGAGGTaGACAGACTCGATGACGTCCAAGAACACCTCATTC +
Preference number: 6 (lower is better)
Translates to: PSHPTPGYLPKR*TDSMTSKNTSF
Trigger: GAATGAGGTGTTCTTGGACGTCATCGAGTCTGTCAACCTCTTGGGTAAATACCCAGGAGTGGGATGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444449.6
CDS CAA 72 bp ATGTGGATCTCCACGTTGTTGGCTGTTGACCGCCGCTaGAACTGGCTTTTGGCCTTGATCATGTACTCGATG +
Preference number: 6 (lower is better)
Translates to: MWISTLLAVDRR*NWLLALIMYSM
Trigger: CATCGAGTACATGATCAAGGCCAAAAGCCAGTTCAAGCGGCGGTCAACAGCCAACAACGTGGAGATCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291439.8
ENST00000444449.6
ENST00000586543.1
ENST00000590756.5
CDS GCA 72 bp ATACTCTACACAGCTGTCTCAAGCAGTGTGAAGTGCTaGTCAACCAAGTGCTTGAAACCAGCTCGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: ILYTAVSSSVKC*STKCLKPARSS
Trigger: GGAGGAACGAGCTGGTTTCAAGCACTTGGTTGAGCAGCACTTCACACTGCTTGAGACAGCTGTGTAGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586461.1
CDS CAA 72 bp AGGAAAGAAAAGACCAGCGACACGCACGCGTTCTTCTaGGATGTGGCAACCAGATACAGGTTGTTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: RKEKTSDTHAFF*DVATRYRLLCL
Trigger: CAAACACAACAACCTGTATCTGGTTGCCACATCCAAGAAGAACGCGTGCGTGTCGCTGGTCTTTTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291439.8
ENST00000429941.6
ENST00000444449.6
ENST00000586957.1
ENST00000589822.5
ENST00000589991.1
ENST00000590263.5
ENST00000590945.5
ENST00000591775.5