RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP1G1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166747

Ensembl transcript IDs: ENST00000299980.9, ENST00000393512.7, ENST00000450149.6, ENST00000562934.1, ENST00000563104.5, ENST00000563259.5, ENST00000564155.5, ENST00000565009.5, ENST00000565161.1, ENST00000565412.5, ENST00000565642.5, ENST00000566161.5, ENST00000566179.1, ENST00000567583.1, ENST00000568327.5, ENST00000569044.1, ENST00000569185.5, ENST00000569748.5, ENST00000569975.5, ENST00000570017.1, ENST00000570052.1, ENST00000570297.5

Found 688 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCGGTTTGGTCTCTAGTGGAGCTGGTTCTGTCTCTCCATTTGTCTaGACAATCTCAGTAGGGCCATTTGTGGTCACTTTTTCCATGACA +
Preference number: 1 (lower is better)
Translates to: GGLVSSGAGSVSPFV*TISVGPFVVTFSMT
Trigger: TGTCATGGAAAAAGTGACCACAAATGGCCCTACTGAGATTGTGCAGACAAATGGAGAGACAGAACCAGCTCCACTAGAGACCAAACCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR GCA 90 bp TTGGTACTGCAGCTTGGAAAACAAAGTCCGTCATATCTAGCTCTGTaGTGTTGGAGGCCTGTATCGTTATCACTGTTACACTGGGGTTGG +
Preference number: 1 (lower is better)
Translates to: LVLQLGKQSPSYLAL*CWRPVSLSLLHWGW
Trigger: CCAACCCCAGTGTAACAGTGATAACGATACAGGCCTCCAACAGCACAGAGCTAGATATGACGGACTTTGTTTTCCAAGCTGCAGTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR CCA 90 bp CTGCAGCTTGGAAAACAAAGTCCGTCATATCTAGCTCTGTGCTGTTaGAGGCCTGTATCGTTATCACTGTTACACTGGGGTTGGTATTTG +
Preference number: 1 (lower is better)
Translates to: LQLGKQSPSYLALCC*RPVSLSLLHWGWYL
Trigger: CAAATACCAACCCCAGTGTAACAGTGATAACGATACAGGCCTCCAACAGCACAGAGCTAGATATGACGGACTTTGTTTTCCAAGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR GCA 90 bp GCCAGATGTGCTGACGTCCTTGCACGATCTTGTGATCCCAATCTTTaGACACGAAATAACCAAGGAGATGTATTTTACTCGCAATCCACT +
Preference number: 1 (lower is better)
Translates to: ARCADVLARSCDPNL*TRNNQGDVFYSQST
Trigger: AGTGGATTGCGAGTAAAATACATCTCCTTGGTTATTTCGTGTGCAAAGATTGGGATCACAAGATCGTGCAAGGACGTCAGCACATCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR CCA 90 bp GTTGATGTCTCCCAGCAAATCAAGAAGTTCTCCACCAGCAGAAGATaGTTTGCTTGTAGGCGCAGTTGGAATAACAGGTGTTATGTCATT +
Preference number: 1 (lower is better)
Translates to: VDVSQQIKKFSTSRR*FACRRSWNNRCYVI
Trigger: AATGACATAACACCTGTTATTCCAACTGCGCCTACAAGCAAACCATCTTCTGCTGGTGGAGAACTTCTTGATTTGCTGGGAGACATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR TCA 90 bp GTTGGAGGCCTGTATCGTTATCACTGTTACACTGGGGTTGGTATTTaGCCGTTCAAAGGTGAATTCTATCTTCAAGCCATTCTTACTGTA +
Preference number: 1 (lower is better)
Translates to: VGGLYRYHCYTGVGI*PFKGEFYLQAILTV
Trigger: TACAGTAAGAATGGCTTGAAGATAGAATTCACCTTTGAACGGTCAAATACCAACCCCAGTGTAACAGTGATAACGATACAGGCCTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR TCA 90 bp TTAAGACAGTCCACAATTGTGCTTCTGTGCCTCTGTACTGCATTATaGTCTGTCTGTACAGTCTTCAACAAAGATGTCAGAGCCACATAT +
Preference number: 1 (lower is better)
Translates to: LRQSTIVLLCLCTAL*SVCTVFNKDVRATY
Trigger: ATATGTGGCTCTGACATCTTTGTTGAAGACTGTACAGACAGATCATAATGCAGTACAGAGGCACAGAAGCACAATTGTGGACTGTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
3UTR GCA 90 bp ACACTGGCCAGATACAAGAAGATCACCATATTCACCTATACACCATaGAGCCACTTGTACCAAAGGTTGTTGAGAATAATCACCAAGAAT +
Preference number: 1 (lower is better)
Translates to: TLARYKKITIFTYTP*SHLYQRLLRIITKN
Trigger: ATTCTTGGTGATTATTCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAATATGGTGATCTTCTTGTATCTGGCCAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR GCA 90 bp CAAATCTTTAAGACAGTCCACAATTGTGCTTCTGTGCCTCTGTACTaGATTATGATCTGTCTGTACAGTCTTCAACAAAGATGTCAGAGC +
Preference number: 1 (lower is better)
Translates to: QIFKTVHNCASVPLY*IMICLYSLQQRCQS
Trigger: GCTCTGACATCTTTGTTGAAGACTGTACAGACAGATCATAATGCAGTACAGAGGCACAGAAGCACAATTGTGGACTGTCTTAAAGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
3UTR GCA 90 bp AGAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATaGCAAATCTCAACAAAAGCTCTTTTTAACTCCATCTGTCCAGTG +
Preference number: 1 (lower is better)
Translates to: RALEVSITNRAPYPS*QISTKALFNSICPV
Trigger: CACTGGACAGATGGAGTTAAAAAGAGCTTTTGTTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR GCA 90 bp ATTCTGGCTCACACGAATCCAGAAAATAAAGTAATTCTTTCATCATaGCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCA +
Preference number: 1 (lower is better)
Translates to: ILAHTNPENKVILSS*LGYYSHLPGQNSIP
Trigger: TGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAGAATTACTTTATTTTCTGGATTCGTGTGAGCCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
3UTR CAA 90 bp AAATCATTGGCCTGGCTGGTGGGCTGTGGCCCAGAGGGTGGCGGTTaGGTCTCTAGTGGAGCTGGTTCTGTCTCTCCATTTGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: KSLAWLVGCGPEGGG*VSSGAGSVSPFVCT
Trigger: TGTGCAGACAAATGGAGAGACAGAACCAGCTCCACTAGAGACCAAACCGCCACCCTCTGGGCCACAGCCCACCAGCCAGGCCAATGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR CAA 90 bp TCTCCTCCAGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTaGATTCTGGCTGTAAATGTGGGAGGGGTGGAGAAGTGCGGAAAA +
Preference number: 2 (lower is better)
Translates to: SPPDQLLISSGAQGM*ILAVNVGGVEKCGK
Trigger: TTTTCCGCACTTCTCCACCCCTCCCACATTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCTGGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCTCTTCAGCTCCTCATaGCCGTGGTACAGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPLFSSS*PWYSWG
Trigger: CCCCCAACTGTACCACGGGCATGAGGAGCTGAAGAG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATCTCTTCAGCTCCTCATaGCCGTGGTACAGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: LQKQPASTVEERTLVFNNLFSSS*PWYSWG
Trigger: CCCCCAACTGTACCACGGGCATGAGGAGCTGAAGAG...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGCTCCTCCAGACCAGCTaGTTATTTCCTCAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKLLQTS*LFPQGP
Trigger: GGGCCCCTGAGGAAATAAGCAGCTGGTCTGGAGGAG...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR CAA 90 bp TGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTaGCCCAGTCCACAGAGAAACAACAGTAGAAAGAAGGGGCAACTC +
Preference number: 2 (lower is better)
Translates to: CLKMVTQLVRNKYPT*PSPQRNNSRKKGQL
Trigger: GAGTTGCCCCTTCTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR CCA 90 bp CAGCTTGGAAAACAAAGTCCGTCATATCTAGCTCTGTGCTGTTGGAGGCCTGTATCCACCAGCAGAAGATaGTTTGCTTGTAGGCGCAGT +
Preference number: 2 (lower is better)
Translates to: QLGKQSPSYLALCCWRPVSTSRR*FACRRS
Trigger: ACTGCGCCTACAAGCAAACCATCTTCTGCTGGTGGA...TACAGGCCTCCAACAGCACAGAGCTAGATATGACGGACTTTGTTTTCCAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR TCA 90 bp AAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCACTCTCTGACTTAGGGGCACAAGCTTTCTaGAATGCGCAAGCATGTCTG +
Preference number: 2 (lower is better)
Translates to: KKRPRIFMARTRNPLSDLGAQAF*NAQACL
Trigger: CAGACATGCTTGCGCATTTCAGAAAGCTTGTGCCCC...TAAGTCAGAGAGTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450149.6
3UTR-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTTTTTCGCCATGGATTaGAGTCCTCTCCTCCAGACC +
Preference number: 2 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKFFAMD*SPLLQT
Trigger: GGTCTGGAGGAGAGGACTGCAATCCATGGCGAAAAA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR CAA 90 bp TATGCACTCTGTGAACACCAAGTACTGCCAGATGTGCTGACGTCCTaGCACGATCTTGTGATCCCAATCTTTGCACACGAAATAACCAAG +
Preference number: 2 (lower is better)
Translates to: YALCEHQVLPDVLTS*HDLVIPIFAHEITK
Trigger: CTTGGTTATTTCGTGTGCAAAGATTGGGATCACAAGATCGTGCAAGGACGTCAGCACATCTGGCAGTACTTGGTGTTCACAGAGTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR TCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTTCCCAGAGTTCCTTTaGTTGAGTGGGATAAAGAAT +
Preference number: 2 (lower is better)
Translates to: SSLQKQPASTVEERTLVFFPEFL*LSGIKN
Trigger: ATTCTTTATCCCACTCAATCAAAGGAACTCTGGGAA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR TCA 90 bp AAGAAGATCACCATATTCACCTATACACCATGCAGCCACTTGTACCAAAGGTTGTACTGCCAGATGTGCTaGCGTCCTTGCACGATCTTG +
Preference number: 2 (lower is better)
Translates to: KKITIFTYTPCSHLYQRLYCQMC*RPCTIL
Trigger: CAAGATCGTGCAAGGACGTCAGCACATCTGGCAGTA...CAACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAATATGGTGATCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCTCCTCCAGACCAGCTaGTTATTTCCTCAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSLLQTS*LFPQGP
Trigger: GGGCCCCTGAGGAAATAAGCAGCTGGTCTGGAGGAG...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGGGGCAACTCTTTGCTaGAGAGACAAAGTGAGTGTT +
Preference number: 2 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKGATLC*RDKVSV
Trigger: AACACTCACTTTGTCTCTGCAGCAAAGAGTTGCCCC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR CCA 90 bp TCTAGTGGAGCTGGTTCTGTCTCTCCATTTGTCTGCACAATCTCAGTAGGGCCATCTTCCTCTTCACACTaGCCAGATACAAGAAGATCA +
Preference number: 2 (lower is better)
Translates to: SSGAGSVSPFVCTISVGPSSSSH*PDTRRS
Trigger: TGATCTTCTTGTATCTGGCCAGTGTGAAGAGGAAGA...TGGCCCTACTGAGATTGTGCAGACAAATGGAGAGACAGAACCAGCTCCACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR CAA 90 bp ACTGCAGCTTGGAAAACAAAGTCCGTCATATCTAGCTCTGTGCTGTaGGAGGCCTGTATCGTTATCACTGTTACACTGGGGTTGGTATTT +
Preference number: 2 (lower is better)
Translates to: TAAWKTKSVISSSVL*EACIVITVTLGLVF
Trigger: AAATACCAACCCCAGTGTAACAGTGATAACGATACAGGCCTCCAACAGCACAGAGCTAGATATGACGGACTTTGTTTTCCAAGCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR TCA 90 bp AAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCACTCTCTGACTTAGCTCACACATTTCTGTaGGGAGGACTACAGATGTGT +
Preference number: 2 (lower is better)
Translates to: KKRPRIFMARTRNPLSDLAHTFL*GGLQMC
Trigger: ACACATCTGTAGTCCTCCTCACAGAAATGTGTGAGC...TAAGTCAGAGAGTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450149.6
3UTR-3UTR TCA 90 bp AGCTGGAGCACCTGTAAGGTTGATGTCTCCCAGCAAATCAAGAAGTTCTCCACCTCGCAATCCACTCTCTaGCTTAATATCCATGATAGT +
Preference number: 2 (lower is better)
Translates to: SWSTCKVDVSQQIKKFSTSQSTL*LNIHDS
Trigger: ACTATCATGGATATTAAGTCAGAGAGTGGATTGCGA...GGTGGAGAACTTCTTGATTTGCTGGGAGACATCAACCTTACAGGTGCTCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAACTCTTCAGCTCCTCATaGCCGTGGTACAGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQLFSSS*PWYSWG
Trigger: CCCCCAACTGTACCACGGGCATGAGGAGCTGAAGAG...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCTCTTCAGCTCCTCATaGCCGTGGTACAGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: TKALFNSICPVFTNKLARLFSSS*PWYSWG
Trigger: CCCCCAACTGTACCACGGGCATGAGGAGCTGAAGAG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR CCA 90 bp GCTAGGACTCGCAATCCACTCTCTGACTTAATATCCATGATAGTCAAAACCGTTATGCGCAAGCATGTCTaGGCTTCGCTCACACATTTC +
Preference number: 2 (lower is better)
Translates to: ARTRNPLSDLISMIVKTVMRKHV*ASLTHF
Trigger: GAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCAT...AACGGTTTTGACTATCATGGATATTAAGTCAGAGAGTGGATTGCGAGTCCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450149.6
3UTR-3UTR CCA 90 bp CTGGGGTTGGTATTTGACCGTTCAAAGGTGAATTCTATCTTCAAGCCATTCTTAAATAAATCATTGGCCTaGCTGGTGGGCTGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: LGLVFDRSKVNSIFKPFLNKSLA*LVGCGP
Trigger: TGGGCCACAGCCCACCAGCCAGGCCAATGATTTATT...TAAGAATGGCTTGAAGATAGAATTCACCTTTGAACGGTCAAATACCAACCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR CAA 90 bp ATGTCTCCCAGCAAATCAAGAAGTTCTCCACCAGCAGAAGATGGTTaGCTTGTAGGCGCAGTTGGAATAACAGGTGTTATGTCATTTCCT +
Preference number: 2 (lower is better)
Translates to: MSPSKSRSSPPAEDG*LVGAVGITGVMSFP
Trigger: AGGAAATGACATAACACCTGTTATTCCAACTGCGCCTACAAGCAAACCATCTTCTGCTGGTGGAGAACTTCTTGATTTGCTGGGAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR CAA 90 bp TCTGTGCTGTTGGAGGCCTGTATCGTTATCACTGTTACACTGGGGTaGGTATTTGACCGTTCAAAGGTGAATTCTATCTTCAAGCCATTC +
Preference number: 2 (lower is better)
Translates to: SVLLEACIVITVTLG*VFDRSKVNSIFKPF
Trigger: GAATGGCTTGAAGATAGAATTCACCTTTGAACGGTCAAATACCAACCCCAGTGTAACAGTGATAACGATACAGGCCTCCAACAGCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTTCCCAGAGTTCCTTTaGTTGAGTGGGATAAAGAAT +
Preference number: 2 (lower is better)
Translates to: LQKQPASTVEERTLVFNNFPEFL*LSGIKN
Trigger: ATTCTTTATCCCACTCAATCAAAGGAACTCTGGGAA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR TCA 90 bp TCTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCCAGGTATGCACTCTGTaGACACCAAGTACTGCCAGA +
Preference number: 2 (lower is better)
Translates to: SFIMPRILFPFTRAKLNSQVCTL*TPSTAR
Trigger: TCTGGCAGTACTTGGTGTTCACAGAGTGCATACCTG...GGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR GCA 90 bp ATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCACTCTCTGACTACAAGCTTTCTGAAATaGGCAAGCATGTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: IRNDPGYLWLGLAIHSLTTSFLK*ASMSGL
Trigger: AAGCCCAGACATGCTTGCGCATTTCAGAAAGCTTGT...AGTCAGAGAGTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450149.6
3UTR-3UTR GCA 90 bp AGAATAATCACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATGACAGTCCACAATTGTaGTTCTGTGCCTCTGTACTG +
Preference number: 2 (lower is better)
Translates to: RIITKNCFVQALDSIGMHDSPQL*FCASVL
Trigger: CAGTACAGAGGCACAGAAGCACAATTGTGGACTGTC...ATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
3UTR-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTTCCCAGAGTTCCTTTaGTTGAGTGGGATAAAGAAT +
Preference number: 2 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKFPEFL*LSGIKN
Trigger: ATTCTTTATCCCACTCAATCAAAGGAACTCTGGGAA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR TCA 90 bp TATCCGGACATGATGAGGTTCTTTAAAATACGAACTAATTGGGGCACAAGCTTTACTTTCCTGATGACATaGACAGCACACAGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: YPDMMRFFKIRTNWGTSFTFLMT*TAHSAA
Trigger: GGCAGCACTGTGTGCTGTTCATGTCATCAGGAAAGT...AAAGCTTGTGCCCCAATTAGTTCGTATTTTAAAGAACCTCATCATGTCCGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450149.6
3UTR-3UTR TCA 90 bp AATTGGGGACTGCATCATCACGAACATAACTTCCTGCCGTTGTCAAAACACGCATCGCAATCCACTCTCTaGCTTAATATCCATGATAGT +
Preference number: 2 (lower is better)
Translates to: NWGLHHHEHNFLPLSKHASQSTL*LNIHDS
Trigger: ACTATCATGGATATTAAGTCAGAGAGTGGATTGCGA...TGCGTGTTTTGACAACGGCAGGAAGTTATGTTCGTGATGATGCAGTCCCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568327.5
3UTR-3UTR GCA 90 bp GCTAGGACTCGCAATCCACTCTCTGACTTAATATCCATGATAGTCAAAACCGTTATGAACAGCACACAGTaGTGCCTTGCTGTAATACTG +
Preference number: 2 (lower is better)
Translates to: ARTRNPLSDLISMIVKTVMNSTQ*CLAVIL
Trigger: CAGTATTACAGCAAGGCAGCACTGTGTGCTGTTCAT...AACGGTTTTGACTATCATGGATATTAAGTCAGAGAGTGGATTGCGAGTCCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450149.6
3UTR-3UTR GCA 90 bp CCATTTGTCTGCACAATCTCAGTAGGGCCATTTGTGGTCACTTTTTCCATGACAAAAACTCAATTCCATTaGACGCCTTGCAGAAGGGAA +
Preference number: 2 (lower is better)
Translates to: PFVCTISVGPFVVTFSMTKTQFH*TPCRRE
Trigger: TTCCCTTCTGCAAGGCGTGCAATGGAATTGAGTTTT...TGTCATGGAAAAAGTGACCACAAATGGCCCTACTGAGATTGTGCAGACAAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR GCA 90 bp AGAATAATCACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATCCATCGTTTGGAAGGTaGATACTTTTCTGCAGCAAG +
Preference number: 2 (lower is better)
Translates to: RIITKNCFVQALDSIGMHPSFGR*ILFCSK
Trigger: CTTGCTGCAGAAAAGTATGCACCTTCCAAACGATGG...ATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
3UTR-3UTR TCA 90 bp CACCATATTCACCTATACACCATGCAGCCACTTGTACCAAAGGTTGTTGAGAATCTCTGTACTGCATTATaGTCTGTCTGTACAGTCTTC +
Preference number: 2 (lower is better)
Translates to: HHIHLYTMQPLVPKVVENLCTAL*SVCTVF
Trigger: GAAGACTGTACAGACAGATCATAATGCAGTACAGAG...ATTCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAATATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
3UTR-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGGGAGAAGAGGAAGAGTaGAAAGTAGCCTCCAGAAGC +
Preference number: 2 (lower is better)
Translates to: TKALFNSICPVFTNKLARGEEEE*KVASRS
Trigger: GCTTCTGGAGGCTACTTTGCACTCTTCCTCTTCTCC...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAATTTTTCGCCATGGATTaGAGTCCTCTCCTCCAGACC +
Preference number: 2 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQFFAMD*SPLLQT
Trigger: GGTCTGGAGGAGAGGACTGCAATCCATGGCGAAAAA...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGGGGCAACTCTTTGCTaGAGAGACAAAGTGAGTGTT +
Preference number: 2 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSGATLC*RDKVSV
Trigger: AACACTCACTTTGTCTCTGCAGCAAAGAGTTGCCCC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGAAGGGGCAACTCTTTaGTGCAGAGACAAAGTGAGT +
Preference number: 2 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSEGATL*CRDKVS
Trigger: ACTCACTTTGTCTCTGCAGCAAAGAGTTGCCCCTTC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR CCA 90 bp ATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCACTCTCTGACTCTATATGCCATCGTTTaGAAGGTGCATACTTTTCTG +
Preference number: 2 (lower is better)
Translates to: IRNDPGYLWLGLAIHSLTLYAIV*KVHTFL
Trigger: CAGAAAAGTATGCACCTTCCAAACGATGGCATATAG...AGTCAGAGAGTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
3UTR-3UTR TCA 90 bp TCTTGTCATTGTTCAATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAGCAAAAAGGGGTCACTaGTACCAGAAACATCATGTT +
Preference number: 2 (lower is better)
Translates to: SCHCSIRNDPGYLWLGLAAKRGH*YQKHHV
Trigger: AACATGATGTTTCTGGTATCAGTGACCCCTTTTTGC...TGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTATTGAACAATGACAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450149.6
3UTR-3UTR TCA 90 bp TCTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCGCAAAAAGGGGTCACTaGTACCAGAAACATCATGTT +
Preference number: 2 (lower is better)
Translates to: SFIMPRILFPFTRAKLNSAKRGH*YQKHHV
Trigger: AACATGATGTTTCTGGTATCAGTGACCCCTTTTTGC...GGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGGGGGCAACTCTTTGCTaGAGAGACAAAGTGAGTGTT +
Preference number: 2 (lower is better)
Translates to: TKALFNSICPVFTNKLARGATLC*RDKVSV
Trigger: AACACTCACTTTGTCTCTGCAGCAAAGAGTTGCCCC...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGGAAGGGGCAACTCTTTaGTGCAGAGACAAAGTGAGT +
Preference number: 2 (lower is better)
Translates to: TKALFNSICPVFTNKLAREGATL*CRDKVS
Trigger: ACTCACTTTGTCTCTGCAGCAAAGAGTTGCCCCTTC...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGTGTGTATACAGCAATaGACAGAAAAGGCTACCAGG +
Preference number: 2 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSVCIQQ*TEKATR
Trigger: CCTGGTAGCCTTTTCTGTGCATTGCTGTATACACAC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp TCATTGTTCAATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCAAACAGCACACAGTGCTaGCTTGCTGTAATACTGTTT +
Preference number: 2 (lower is better)
Translates to: SLFNKKRPRIFMARTRNPNSTQC*LAVILF
Trigger: AAACAGTATTACAGCAAGGCAGCACTGTGTGCTGTT...TGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTATTGAACAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450149.6
3UTR-3UTR GCA 90 bp CACTTGTACCAAAGGTTGTTGAGAATAATCACCAAGAATTGCTTTGTACAGGCGTCCAGATGCACAGTCTaGTTTAAATTCTGGCTCACA +
Preference number: 2 (lower is better)
Translates to: HLYQRLLRIITKNCFVQASRCTV*FKFWLT
Trigger: TGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGA...CGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAACAACCTTTGGTACAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
3UTR-3UTR GCA 90 bp GTCTGTACAGTCTTCAACAAAGATGTCAGAGCCACATATCTAATATTCTTGTCAGACAGTCCACAATTGTaGTTCTGTGCCTCTGTACTG +
Preference number: 2 (lower is better)
Translates to: VCTVFNKDVRATYLIFLSDSPQL*FCASVL
Trigger: CAGTACAGAGGCACAGAAGCACAATTGTGGACTGTC...TGACAAGAATATTAGATATGTGGCTCTGACATCTTTGTTGAAGACTGTACAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
3UTR-3UTR GCA 90 bp GTCAGAGCCACATATCTAATATTCTTGTCATTGTTCAATAAGAAACGACCCAGGCCATCGTTTGGAAGGTaGATACTTTTCTGCAGCAAG +
Preference number: 2 (lower is better)
Translates to: VRATYLIFLSLFNKKRPRPSFGR*ILFCSK
Trigger: CTTGCTGCAGAAAAGTATGCACCTTCCAAACGATGG...CCTGGGTCGTTTCTTATTGAACAATGACAAGAATATTAGATATGTGGCTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
3UTR-3UTR CCA 90 bp CGTACCTGCAAAAAGGGGTCACTGATACCAGAAACATCATGTTCTGGTGAATATAAAATACGAACTAATTaGGGCACAAGCTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: RTCKKGSLIPETSCSGEYKIRTN*GTSCRE
Trigger: TTCTCTGCAGCTTGTGCCCCAATTAGTTCGTATTTT...ATATTCACCAGAACATGATGTTTCTGGTATCAGTGACCCCTTTTTGCAGGTACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR CAA 90 bp ATCTGTCCAGTGTTTACAAATAAACTCGCAAGGTCTGACCAGTTCTaGGTAACAAACATACATGTGTGTGTCTGTGTGTATACAGCAATG +
Preference number: 2 (lower is better)
Translates to: ICPVFTNKLARSDQF*VTNIHVCVCVYTAM
Trigger: CATTGCTGTATACACACAGACACACACATGTATGTTTGTTACCAAGAACTGGTCAGACCTTGCGAGTTTATTTGTAAACACTGGACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAATAAATACCCCACCTTaGCCAGTCCACAGAGAAACA +
Preference number: 2 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQINTPP*PVHRET
Trigger: TGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTAT...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR GCA 90 bp TTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGCCGTTTTATTGAGACAATAATTGTGTCTATATaGCATCGTTTGGAAGGTGCA +
Preference number: 2 (lower is better)
Translates to: FPFTRAKLNSIARRFIETIIVSI*HRLEGA
Trigger: TGCACCTTCCAAACGATGGCATATAGACACAATTAT...TGTCTCAATAAAACGGCGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
3UTR-3UTR CCA 90 bp TCATTGTTCAATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCAGTGTGGAGGACACCATaGTTCTTCTCATTCAATAAA +
Preference number: 2 (lower is better)
Translates to: SLFNKKRPRIFMARTRNPVWRTP*FFSFNK
Trigger: TTTATTGAATGAGAAGAACCATGGTGTCCTCCACAC...TGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTATTGAACAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450149.6
3UTR-3UTR CCA 90 bp TTAAATTGGGGACTGCATCATCACGAACATAACTTCCTGCACTTCCAAAAGTTCGTCTGCTTTAAATTCTaGCTCACACGAATCCAGAAA +
Preference number: 2 (lower is better)
Translates to: LNWGLHHHEHNFLHFQKFVCFKF*LTRIQK
Trigger: TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGAC...GAACTTTTGGAAGTGCAGGAAGTTATGTTCGTGATGATGCAGTCCCCAATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCATTTCCATTCCGAATaGCAGATGTTAAAAGTGCCT +
Preference number: 2 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSHFHSE*QMLKVP
Trigger: AGGCACTTTTAACATCTGGCATTCGGAATGGAAATG...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR TCA 90 bp TTAGTGGCAACCTGTGCTAATATATCATTCATAGCTTCACTTGAATCATCATCAAACATCATGTTCTGGTaGATATCCGGACATGATGAG +
Preference number: 2 (lower is better)
Translates to: LVATCANISFIASLESSSNIMFW*ISGHDE
Trigger: CTCATCATGTCCGGATATTCACCAGAACATGATGTT...TGATGATGATTCAAGTGAAGCTATGAATGATATATTAGCACAGGTTGCCACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000565009.5
3UTR-3UTR TCA 90 bp TCAGTATTAGTGGCAACCTGTGCTAATATATCATTCATAGCTTCACTTGAATCAAACATCATGTTCTGGTaGATATCCGGACATGATGAG +
Preference number: 2 (lower is better)
Translates to: SVLVATCANISFIASLESNIMFW*ISGHDE
Trigger: CTCATCATGTCCGGATATTCACCAGAACATGATGTT...TGATTCAAGTGAAGCTATGAATGATATATTAGCACAGGTTGCCACTAATACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000565009.5
3UTR-3UTR TCA 90 bp TTGTCATTGTTCAATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATATTCATAGCTTCACTTaGATCATCATCATTTCGTCC +
Preference number: 2 (lower is better)
Translates to: LSLFNKKRPRIFMARTRNIHSFT*IIIISS
Trigger: GGACGAAATGATGATGATTCAAGTGAAGCTATGAAT...ATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTATTGAACAATGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
3UTR-3UTR GCA 90 bp ATTCACCTATACACCATGCAGCCACTTGTACCAAAGGTTGTTGAGAATAATCACAAGAAAGATTCCAGATaGACAGTCTGCTTTAAATTC +
Preference number: 2 (lower is better)
Translates to: IHLYTMQPLVPKVVENNHKKDSR*TVCFKF
Trigger: GAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTT...GTGATTATTCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
3UTR-3UTR CCA 90 bp ATCTCCACACTATTAGTTATTAACTGGATTAAATTGGGGACTGCATCATCACGACTATATGCCATCGTTTaGAAGGTGCATACTTTTCTG +
Preference number: 2 (lower is better)
Translates to: ISTLLVINWIKLGTASSRLYAIV*KVHTFL
Trigger: CAGAAAAGTATGCACCTTCCAAACGATGGCATATAG...TCGTGATGATGCAGTCCCCAATTTAATCCAGTTAATAACTAATAGTGTGGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
3UTR-3UTR GCA 90 bp AATAAAGTAATTCTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAATAATTGTGTCTATATaGCATCGTTTGGAAGGTGCA +
Preference number: 2 (lower is better)
Translates to: NKVILSSCLGYYSHLPGQIIVSI*HRLEGA
Trigger: TGCACCTTCCAAACGATGGCATATAGACACAATTAT...TTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAGAATTACTTTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
3UTR-3UTR CAA 90 bp GGCTGTGGCCCAGAGGGTGGCGGTTTGGTCTCTAGTGGAGCTGGTTCTGTCTCTACACCATGCAGCCACTaGTACCAAAGGTTGTTGAGA +
Preference number: 3 (lower is better)
Translates to: GCGPEGGGLVSSGAGSVSTPCSH*YQRLLR
Trigger: TCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGT...AGAGACAGAACCAGCTCCACTAGAGACCAAACCGCCACCCTCTGGGCCACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR CCA 72 bp TTGGGGCACAAGCTTTCTGAAATGCGCAAGCATGTCTaGGCTTCGCTCACACATTTCTGTGAGGAGGACTAC +
Preference number: 3 (lower is better)
Translates to: LGHKLSEMRKHV*ASLTHFCEEDY
Trigger: GTAGTCCTCCTCACAGAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCATTTCAGAAAGCTTGTGCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450149.6
3UTR-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCAGAAGGGGCAACTCTTaGCTGCAGAGACAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPRRGNS*LQRQSE
Trigger: CTCACTTTGTCTCTGCAGCAAAGAGTTGCCCCTTCT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCTTCCCAGAGTTCCTTaGATTGAGTGGGATAAAGAA +
Preference number: 3 (lower is better)
Translates to: SSLQKQPASTVEERTLVFLPRVP*IEWDKE
Trigger: TTCTTTATCCCACTCAATCAAAGGAACTCTGGGAAG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACTTCCCAGAGTTCCTTaGATTGAGTGGGATAAAGAA +
Preference number: 3 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKLPRVP*IEWDKE
Trigger: TTCTTTATCCCACTCAATCAAAGGAACTCTGGGAAG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR GCA 72 bp GTCTCTAGTGGAGCTGGTTCTGTCTCTCCATTTGTCTaGACAATCTCAGTAGGGCCATTTGTGGTCACTTTT +
Preference number: 3 (lower is better)
Translates to: VSSGAGSVSPFV*TISVGPFVVTF
Trigger: AAAAGTGACCACAAATGGCCCTACTGAGATTGTGCAGACAAATGGAGAGACAGAACCAGCTCCACTAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR CCA 72 bp TCCCAGCAAATCAAGAAGTTCTCCACCAGCAGAAGATaGTTTGCTTGTAGGCGCAGTTGGAATAACAGGTGT +
Preference number: 3 (lower is better)
Translates to: SQQIKKFSTSRR*FACRRSWNNRC
Trigger: ACACCTGTTATTCCAACTGCGCCTACAAGCAAACCATCTTCTGCTGGTGGAGAACTTCTTGATTTGCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR CCA 72 bp GGAAAACAAAGTCCGTCATATCTAGCTCTGTGCTGTTaGAGGCCTGTATCGTTATCACTGTTACACTGGGGT +
Preference number: 3 (lower is better)
Translates to: GKQSPSYLALCC*RPVSLSLLHWG
Trigger: ACCCCAGTGTAACAGTGATAACGATACAGGCCTCCAACAGCACAGAGCTAGATATGACGGACTTTGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR GCA 72 bp CAGCTTGGAAAACAAAGTCCGTCATATCTAGCTCTGTaGTGTTGGAGGCCTGTATCGTTATCACTGTTACAC +
Preference number: 3 (lower is better)
Translates to: QLGKQSPSYLAL*CWRPVSLSLLH
Trigger: GTGTAACAGTGATAACGATACAGGCCTCCAACAGCACAGAGCTAGATATGACGGACTTTGTTTTCCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGGGGCCCAGGGAATGTaGATTCTGGCTGTAAATGTG +
Preference number: 3 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQGAQGM*ILAVNV
Trigger: CACATTTACAGCCAGAATCAACATTCCCTGGGCCCC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR CAA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGAGAAGGGGCAACTCTTaGCTGCAGAGACAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: TKALFNSICPVFTNKLARRRGNS*LQRQSE
Trigger: CTCACTTTGTCTCTGCAGCAAAGAGTTGCCCCTTCT...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR CAA 90 bp TCCTGCCGTTGTCAAAACACGCATAATTGTGTCTATATGCCATCGTTTGGAAGGCAAAACTCAATTCCATaGCACGCCGTTTTATTGAGA +
Preference number: 3 (lower is better)
Translates to: SCRCQNTHNCVYMPSFGRQNSIP*HAVLLR
Trigger: TCTCAATAAAACGGCGTGCAATGGAATTGAGTTTTG...CCTTCCAAACGATGGCATATAGACACAATTATGCGTGTTTTGACAACGGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
3UTR-3UTR CAA 90 bp GCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACGAATCCTCTATATGCCATCGTTaGGAAGGTGCATACTTTTCT +
Preference number: 3 (lower is better)
Translates to: ARKIPDAQSALNSGSHESSICHR*EGAYFS
Trigger: AGAAAAGTATGCACCTTCCAAACGATGGCATATAGA...GGATTCGTGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
3UTR TCA 72 bp TCCACAATTGTGCTTCTGTGCCTCTGTACTGCATTATaGTCTGTCTGTACAGTCTTCAACAAAGATGTCAGA +
Preference number: 3 (lower is better)
Translates to: STIVLLCLCTAL*SVCTVFNKDVR
Trigger: TCTGACATCTTTGTTGAAGACTGTACAGACAGATCATAATGCAGTACAGAGGCACAGAAGCACAATTGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
3UTR GCA 72 bp TTGTACCAAAGGTTGTTGAGAATAATCACCAAGAATTaGTTTGTACAGGCGCTGGACAGTATAGGCATGCAT +
Preference number: 3 (lower is better)
Translates to: LYQRLLRIITKN*FVQALDSIGMH
Trigger: ATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAACAACCTTTGGTACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
3UTR-3UTR CAA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCTTCCCAGAGTTCCTTaGATTGAGTGGGATAAAGAA +
Preference number: 3 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSLPRVP*IEWDKE
Trigger: TTCTTTATCCCACTCAATCAAAGGAACTCTGGGAAG...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR CAA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTAGGTCTGACCAGTTCTaGGTAACAAACATACATGTG +
Preference number: 3 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSRSDQF*VTNIHV
Trigger: CACATGTATGTTTGTTACCAAGAACTGGTCAGACCT...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR TCA 72 bp CTGTATCGTTATCACTGTTACACTGGGGTTGGTATTTaGCCGTTCAAAGGTGAATTCTATCTTCAAGCCATT +
Preference number: 3 (lower is better)
Translates to: LYRYHCYTGVGI*PFKGEFYLQAI
Trigger: AATGGCTTGAAGATAGAATTCACCTTTGAACGGTCAAATACCAACCCCAGTGTAACAGTGATAACGATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAACTTCCCAGAGTTCCTTaGATTGAGTGGGATAAAGAA +
Preference number: 3 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQLPRVP*IEWDKE
Trigger: TTCTTTATCCCACTCAATCAAAGGAACTCTGGGAAG...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR-3UTR CAA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGTGCCTCTTTCAAACATaGGGGGAACCAGTAGAAAAA +
Preference number: 3 (lower is better)
Translates to: TKALFNSICPVFTNKLARCLFQT*GEPVEK
Trigger: TTTTTCTACTGGTTCCCCCAATGTTTGAAAGAGGCA...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
3UTR GCA 72 bp AGATACAAGAAGATCACCATATTCACCTATACACCATaGAGCCACTTGTACCAAAGGTTGTTGAGAATAATC +
Preference number: 3 (lower is better)
Translates to: RYKKITIFTYTP*SHLYQRLLRII
Trigger: GATTATTCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAATATGGTGATCTTCTTGTATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
3UTR GCA 72 bp CACACGAATCCAGAAAATAAAGTAATTCTTTCATCATaGCTCGGATATTATTCCCATTTACCAGGGCAAAAC +
Preference number: 3 (lower is better)
Translates to: HTNPENKVILSS*LGYYSHLPGQN
Trigger: GTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAGAATTACTTTATTTTCTGGATTCGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
3UTR-3UTR CAA 90 bp AATAAAGTAATTCTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAACAAAACTCAATTCCATaGCACGCCGTTTTATTGAGA +
Preference number: 3 (lower is better)
Translates to: NKVILSSCLGYYSHLPGQQNSIP*HAVLLR
Trigger: TCTCAATAAAACGGCGTGCAATGGAATTGAGTTTTG...TTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAGAATTACTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
3UTR TCA 72 bp AACCAAGGAGATGTATTTTACTCGCAATCCACTCTCTaGCTTAATATCCATGATAGTCAAAACCGTTTCATA +
Preference number: 3 (lower is better)
Translates to: NQGDVFYSQSTL*LNIHDSQNRFI
Trigger: TATGAAACGGTTTTGACTATCATGGATATTAAGTCAGAGAGTGGATTGCGAGTAAAATACATCTCCTTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR GCA 72 bp GAAGTTTCTATTACAAATAGAGCACCATATCCTTCATaGCAAATCTCAACAAAAGCTCTTTTTAACTCCATC +
Preference number: 3 (lower is better)
Translates to: EVSITNRAPYPS*QISTKALFNSI
Trigger: GATGGAGTTAAAAAGAGCTTTTGTTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCATTGGCCTGGCTGGTaGGCTGTGGCCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFHWPGW*AVAQRV
Trigger: CACCCTCTGGGCCACAGCCCACCAGCCAGGCCAATG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGCCCGAAACCTCGAATaGAACCAGCAGCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFARNLE*NQQLRG
Trigger: CCCCCGGAGCTGCTGGTTTCATTCGAGGTTTCGGGC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCGATGACGCGAGACGCTaGTGCCGAGTCACCGCTGCG +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPDDARR*CRVTAA
Trigger: CGCAGCGGTGACTCGGCAGCAGCGTCTCGCGTCATC...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393512.7
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACAAGGAGGAGGCGACTaGTCCTGGCAGAGCGACGCA +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKQGGGD*SWQSDA
Trigger: TGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATCATTGGCCTGGCTGGTaGGCTGTGGCCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNHWPGW*AVAQRV
Trigger: CACCCTCTGGGCCACAGCCCACCAGCCAGGCCAATG...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAATCATTGGCCTGGCTaGTGGGCTGTGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFNHWPG*WAVAQR
Trigger: CCTCTGGGCCACAGCCCACCAGCCAGGCCAATGATT...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTCAGCTCCCGCAATCTaGTGGGGGCTGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSAPAI*WGLASS
Trigger: CGAGGATGCCAGCCCCCATCAGATTGCGGGAGCTGA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000393512.7
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCTCCTCCAGACCAGCTaGTTATTTCCTCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFLLQTS*LFPQGP
Trigger: GGGCCCCTGAGGAAATAAGCAGCTGGTCTGGAGGAG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCTGCCGAGTCACCGCTaGGATGAGTCTGAGCGAGAA +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFLPSHR*DESERE
Trigger: TTCTCGCTCAGACTCATCGCAGCGGTGACTCGGCAG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393512.7
CDS-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGACGCGAGACGCTGCTaGCGAGTCACCGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKDARRC*RVTAAM
Trigger: CATCGCAGCGGTGACTCGGCAGCAGCGTCTCGCGTC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393512.7
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCTGCCGAGGACTATTTaGCAAGGAGGAGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFLPRTI*QGGGDC
Trigger: GCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCAATCTGATGGGGGCTaGCATCCTCGGCCCGAAACC +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPQSDGG*HPRPET
Trigger: GGTTTCGGGCCGAGGATGCCAGCCCCCATCAGATTG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000393512.7
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTTCGGGCTGTCCGGATaGTCCGGATCAGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNFGLSG*SGSAPA
Trigger: TGCGGGAGCTGATCCGGACCATCCGGACAGCCCGAA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGCATTGGCCTGGCTGGTaGGCTGTGGCCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKHWPGW*AVAQRV
Trigger: CACCCTCTGGGCCACAGCCCACCAGCCAGGCCAATG...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCCTGTCCTCCTCTCCTaGTCGTTTCCGTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFPVLLS*SFPCPR
Trigger: ACGAGGACACGGAAACGACCAGGAGAGGAGGACAGG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTCAGCTCCCGCAATCTaGTGGGGGCTGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKSAPAI*WGLASS
Trigger: CGAGGATGCCAGCCCCCATCAGATTGCGGGAGCTGA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000393512.7
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTTCGGGCTGTCCGGATaGTCCGGATCAGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKFGLSG*SGSAPA
Trigger: TGCGGGAGCTGATCCGGACCATCCGGACAGCCCGAA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATAATCATTGGCCTGGCTaGTGGGCTGTGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNNHWPG*WAVAQR
Trigger: CCTCTGGGCCACAGCCCACCAGCCAGGCCAATGATT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp GTACTGCAGCTTGGAAAACAAAGTCCGTCATATCTAGCTCTGTGCTGTTGGAGGAATCATTGGCCTGGCTaGTGGGCTGTGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VLQLGKQSPSYLALCCWRNHWPG*WAVAQR
Trigger: CCTCTGGGCCACAGCCCACCAGCCAGGCCAATGATT...CCTCCAACAGCACAGAGCTAGATATGACGGACTTTGTTTTCCAAGCTGCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGGCAGGAGCAGCAGCTaGAGCACCTGTAAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFGRSSS*STCKVD
Trigger: ATCAACCTTACAGGTGCTCCAGCTGCTGCTCCTGCC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGGAGGCGACTGCTCCTaGCAGAGCGACGCAAACGTA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNGGDCS*QSDANV
Trigger: TACGTTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGCTCCCGGCCTCTCCTaGCCCAGCTTCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKAPGLS*PSFSVF
Trigger: GAAGACAGAGAAGCTGGGCCAGGAGAGGCCGGGAGC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR CCA 90 bp CTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCAAGTCGGAGCAGCCCCTaGGGCTCCCGGCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSSCLGYYSHLPGQNSIPSRSSP*GSRPLL
Trigger: CAGGAGAGGCCGGGAGCCCCAGGGGCTGCTCCGACT...TGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR TCA 90 bp CATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGTCAGCTCCCGCAATCTaGTGGGGGCTGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: HASDIIPIYQGKTQFHCTSAPAI*WGLASS
Trigger: CGAGGATGCCAGCCCCCATCAGATTGCGGGAGCTGA...CGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR TCA 90 bp AATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATCTCCACACTATTAGTTCAGCTCCCGCAATCTaGTGGGGGCTGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: NCFVQALDSIGMHLHTISSAPAI*WGLASS
Trigger: CGAGGATGCCAGCCCCCATCAGATTGCGGGAGCTGA...ACTAATAGTGTGGAGATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR TCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGGGGCACAAGCTTTCTaGAATGCGCAAGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFGAQAF*NAQACL
Trigger: CAGACATGCTTGCGCATTTCAGAAAGCTTGTGCCCC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR TCA 90 bp GCAAGCATGTCTGGGCTTCGCTCACACATTTCTGTGAGGAGGACTACAGATGTGGGGGCACAAGCTTTCTaGAATGCGCAAGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: ASMSGLRSHISVRRTTDVGAQAF*NAQACL
Trigger: CAGACATGCTTGCGCATTTCAGAAAGCTTGTGCCCC...CACATCTGTAGTCCTCCTCACAGAAATGTGTGAGCGAAGCCCAGACATGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR TCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCAGGCGGAGGGATCCTaGGGAAGGAGGGAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPQAEGS*GRREFL
Trigger: TAAAAACTCCCTCCTTCCTCAGGATCCCTCCGCCTG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATCTCTGAGGAGCCCATaGAGCCGAGGGTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKSLRSP*SRGYKV
Trigger: CACTTTGTACCCTCGGCTGCATGGGCTCCTCAGAGA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATCTCCTCCAGACCAGCTaGTTATTTCCTCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNLLQTS*LFPQGP
Trigger: GGGCCCCTGAGGAAATAAGCAGCTGGTCTGGAGGAG...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCTCTCGTTCTTCAGCTTaGGTTCGGGCTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPSRSSA*VRAVRM
Trigger: CATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGA...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp GCAGCAGCTGGAGCACCTGTAAGGTTGATGTCTCCCAGCAAATCAAGAAGTTCTTCTCGTTCTTCAGCTTaGGTTCGGGCTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: AAAGAPVRLMSPSKSRSSSRSSA*VRAVRM
Trigger: CATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGA...AGAACTTCTTGATTTGCTGGGAGACATCAACCTTACAGGTGCTCCAGCTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGAATCATTGGCCTGGCTaGTGGGCTGTGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKNHWPG*WAVAQR
Trigger: CCTCTGGGCCACAGCCCACCAGCCAGGCCAATGATT...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGGAGGCGACTGCTCCTaGCAGAGCGACGCAAACGTA +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKGGDCS*QSDANV
Trigger: TACGTTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATCCTGTCCTCCTCTCCTaGTCGTTTCCGTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNPVLLS*SFPCPR
Trigger: ACGAGGACACGGAAACGACCAGGAGAGGAGGACAGG...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp GGATTAAATTGGGGACTGCATCATCACGAACATAACTTCCTGCCGTTGTCAAAACCCACAGCCTGGGACTaGACCCCTGAAACGGCCCGA +
Preference number: 4 (lower is better)
Translates to: GLNWGLHHHEHNFLPLSKPTAWD*TPETAR
Trigger: TCGGGCCGTTTCAGGGGTCCAGTCCCAGGCTGTGGG...TTTTGACAACGGCAGGAAGTTATGTTCGTGATGATGCAGTCCCCAATTTAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR TCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTACTTTCCTGATGACATaGACAGCACACAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFTFLMT*TAHSAA
Trigger: GGCAGCACTGTGTGCTGTTCATGTCATCAGGAAAGT...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTCTCTGAGGAGCCCATaGAGCCGAGGGTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSLRSP*SRGYKV
Trigger: CACTTTGTACCCTCGGCTGCATGGGCTCCTCAGAGA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGCCATTCTTACTGTATaGTGTGATGGAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFAILTV*CDGGDA
Trigger: GGCATCCCCTCCATCACAGCATACAGTAAGAATGGC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGGTCCCCGTGTTAAATaGTGGGACAATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKGPRVK*WDNAAA
Trigger: AGCAGCAGCATTGTCCCAGCATTTAACACGGGGACC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGCTCTTCAGCTCCTCATaGCCGTGGTACAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKLFSSS*PWYSWG
Trigger: CCCCCAACTGTACCACGGGCATGAGGAGCTGAAGAG...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGGAGAAGAGGAAGAGTaGAAAGTAGCCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFGEEEE*KVASRS
Trigger: GCTTCTGGAGGCTACTTTGCACTCTTCCTCTTCTCC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTTTTTCGCCATGGATTaGAGTCCTCTCCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFFFAMD*SPLLQT
Trigger: GGTCTGGAGGAGAGGACTGCAATCCATGGCGAAAAA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
51% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCAAGAACTCGGACCCTaGCGAGGACTATTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPQELGP*RGLFAK
Trigger: CTTGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp GCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGCCGTCTCGTTCTTCAGCTTaGGTTCGGGCTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: ASDIIPIYQGKTQFHCTPSRSSA*VRAVRM
Trigger: CATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGA...CGGCGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTATGCGCAAGCATGTCTaGGCTTCGCTCACACATTTC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFMRKHV*ASLTHF
Trigger: GAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCAT...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCAATAAATCATTGGCCTaGCTGGTGGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPNKSLA*LVGCGP
Trigger: TGGGCCACAGCCCACCAGCCAGGCCAATGATTTATT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGGCAGGAGCAGCAGCTaGAGCACCTGTAAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNGRSSS*STCKVD
Trigger: ATCAACCTTACAGGTGCTCCAGCTGCTGCTCCTGCC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACCCCGTGTTAAATGCTaGGACAATGCTGCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKPRVKC*DNAAAR
Trigger: CCTAGCAGCAGCATTGTCCCAGCATTTAACACGGGG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp TTGAGAATAATCACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGGCTCCCGGCCTCTCCTaGCCCAGCTTCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LRIITKNCFVQALDSIGMAPGLS*PSFSVF
Trigger: GAAGACAGAGAAGCTGGGCCAGGAGAGGCCGGGAGC...CATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAAGTCGGAGCAGCCCCTaGGGCTCCCGGCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQSRSSP*GSRPLL
Trigger: CAGGAGAGGCCGGGAGCCCCAGGGGCTGCTCCGACT...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR CCA 90 bp TTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACAATCTGATGGGGGCTaGCATCCTCGGCGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: FCSKKDSRCTVCFKFWLTQSDGG*HPRRGN
Trigger: GTTGCCCCGCCGAGGATGCCAGCCCCCATCAGATTG...TGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR TCA 90 bp TCATTGTTCAATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCAGCCCGAAACCTCGAATaGAACCAGCAGCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SLFNKKRPRIFMARTRNPARNLE*NQQLRG
Trigger: CCCCCGGAGCTGCTGGTTTCATTCGAGGTTTCGGGC...TGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTATTGAACAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR TCA 90 bp CTGGGGTTGGTATTTGACCGTTCAAAGGTGAATTCTATCTTCAAGCCATTCTTAGCCCGAAACCTCGAATaGAACCAGCAGCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LGLVFDRSKVNSIFKPFLARNLE*NQQLRG
Trigger: CCCCCGGAGCTGCTGGTTTCATTCGAGGTTTCGGGC...TAAGAATGGCTTGAAGATAGAATTCACCTTTGAACGGTCAAATACCAACCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp GTACTGCATTATGATCTGTCTGTACAGTCTTCAACAAAGATGTCAGAGCCACATGCCCGAAACCTCGAATaGAACCAGCAGCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: VLHYDLSVQSSTKMSEPHARNLE*NQQLRG
Trigger: CCCCCGGAGCTGCTGGTTTCATTCGAGGTTTCGGGC...ATGTGGCTCTGACATCTTTGTTGAAGACTGTACAGACAGATCATAATGCAGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTCTTACTGTATGCTGTaGTGGAGGGGATGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSYCML*WRGCLQ
Trigger: CTGCAGGCATCCCCTCCATCACAGCATACAGTAAGA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCTTCTCTACCTCTCCTaGAAGATCTCTGCACATCTC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFLLYLS*KISAHL
Trigger: GAGATGTGCAGAGATCTTGCAGGAGAGGTAGAGAAG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGATGGAGGGGATGCCTaGAGCAATATCATTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFDGGDA*SNIIEE
Trigger: CTCTTCAATGATATTGCTGCAGGCATCCCCTCCATC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGCCATTCTTACTGTATaGTGTGATGGAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKAILTV*CDGGDA
Trigger: GGCATCCCCTCCATCACAGCATACAGTAAGAATGGC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGGAGAAGAGGAAGAGTaGAAAGTAGCCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKGEEEE*KVASRS
Trigger: GCTTCTGGAGGCTACTTTGCACTCTTCCTCTTCTCC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCTTTTTCGCCATGGATTaGAGTCCTCTCCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPFFAMD*SPLLQT
Trigger: GGTCTGGAGGAGAGGACTGCAATCCATGGCGAAAAA...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGGGGCAACTCTTTGCTaGAGAGACAAAGTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFGATLC*RDKVSV
Trigger: AACACTCACTTTGTCTCTGCAGCAAAGAGTTGCCCC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGATCACCCAAGGAAATaGTCTGTCAGCAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFDHPRK*SVSRVD
Trigger: GTCTACTCTGCTGACAGAGCATTTCCTTGGGTGATC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299980.9
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTCTCGTTCTTCAGCTTaGGTTCGGGCTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKSRSSA*VRAVRM
Trigger: CATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAATGCGCAAGCATGTCTaGGCTTCGCTCACACATTTC +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKMRKHV*ASLTHF
Trigger: GAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCAT...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGACCCAGGATATTTATaGCTAGGACTCGCAATCCAC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFDPGYL*LGLAIH
Trigger: GTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp GTAATTCTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCACATTGGCCTGGCTGGTaGGCTGTGGCCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VILSSCLGYYSHLPGQNSHWPGW*AVAQRV
Trigger: CACCCTCTGGGCCACAGCCCACCAGCCAGGCCAATG...TGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAGAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCATTGGCCTGGCTGGTaGGCTGTGGCCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSHWPGW*AVAQRV
Trigger: CACCCTCTGGGCCACAGCCCACCAGCCAGGCCAATG...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCTAGCTCTGTGCTGTTaGAGGCCTGTATCGTTATCA +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFLALCC*RPVSLS
Trigger: TGATAACGATACAGGCCTCCAACAGCACAGAGCTAG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATCCCCGTGTTAAATGCTaGGACAATGCTGCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNPRVKC*DNAAAR
Trigger: CCTAGCAGCAGCATTGTCCCAGCATTTAACACGGGG...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGCGAGAAAGGGGAGCTaGAAGAGCCTTGGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNARKGS*KSLGSF
Trigger: GAAACTTCCAAGGCTCTTCCAGCTCCCCTTTCTCGC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGCTCACACATTTCTGTaGGGAGGACTACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKAHTFL*GGLQMC
Trigger: ACACATCTGTAGTCCTCCTCACAGAAATGTGTGAGC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTCTTACTGTATGCTGTaGTGGAGGGGATGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKSYCML*WRGCLQ
Trigger: CTGCAGGCATCCCCTCCATCACAGCATACAGTAAGA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCGCAGCTGTTGCTTCTaGGGGTTCAGAACTTTAATG +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPRSCCF*GFRTLM
Trigger: CATTAAAGTTCTGAACCCTCAGAAGCAACAGCTGCG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCGAGTGGGATAAAGAATaGGAATGGTGCCAAACCCTC +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPEWDKE*EWCQTL
Trigger: GAGGGTTTGGCACCATTCTCATTCTTTATCCCACTC...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGAGTGGGATAAAGAATaGGAATGGTGCCAAACCCTC +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKEWDKE*EWCQTL
Trigger: GAGGGTTTGGCACCATTCTCATTCTTTATCCCACTC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCTTCTCTACCTCTCCTaGAAGATCTCTGCACATCTC +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPLLYLS*KISAHL
Trigger: GAGATGTGCAGAGATCTTGCAGGAGAGGTAGAGAAG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCCATCGTTTGGAAGGTaGATACTTTTCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFPSFGR*ILFCSK
Trigger: CTTGCTGCAGAAAAGTATGCACCTTCCAAACGATGG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTTCACCTATACACCATaGAGCCACTTGTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFFTYTP*SHLYQR
Trigger: CCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTATTCTACTGCCCTCTaGTGGAGTTCCACATCAATG +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFYSTAL*WSSTSM
Trigger: CATTGATGTGGAACTCCAGCAGAGGGCAGTAGAATA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTGCATTATATTCTACTaGCCTCTGCTGGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFCIIFY*PLLEFH
Trigger: GTGGAACTCCAGCAGAGGGCAGTAGAATATAATGCA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGTCTCTCCATTTGTCTaGACAATCTCAGTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKVSPFV*TISVGP
Trigger: TGGCCCTACTGAGATTGTGCAGACAAATGGAGAGAC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCGATGGAGGGGATGCCTaGAGCAATATCATTGAAGAG +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPDGGDA*SNIIEE
Trigger: CTCTTCAATGATATTGCTGCAGGCATCCCCTCCATC...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGCCATTCTTACTGTATaGTGTGATGGAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNAILTV*CDGGDA
Trigger: GGCATCCCCTCCATCACAGCATACAGTAAGAATGGC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTTTTTCGCCATGGATTaGAGTCCTCTCCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNFFAMD*SPLLQT
Trigger: GGTCTGGAGGAGAGGACTGCAATCCATGGCGAAAAA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGGGGCAACTCTTTGCTaGAGAGACAAAGTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKGATLC*RDKVSV
Trigger: AACACTCACTTTGTCTCTGCAGCAAAGAGTTGCCCC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGAAGGGGCAACTCTTTaGTGCAGAGACAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKEGATL*CRDKVS
Trigger: ACTCACTTTGTCTCTGCAGCAAAGAGTTGCCCCTTC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGGAGGAGGCGACTaGTCCTGGCAGAGCGACGCA +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSQGGGD*SWQSDA
Trigger: TGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTG...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCTCCGTGTCCTCGTACTaGAACTTATCGTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPSVSSY*NLSCLF
Trigger: GAAAAGGCACGATAAGTTGCAGTACGAGGACACGGA...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATCCGTGTCCTCGTACTaGAACTTATCGTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKSVSSY*NLSCLF
Trigger: GAAAAGGCACGATAAGTTGCAGTACGAGGACACGGA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp AAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCACTCTCTGACTTATCTCGTTCTTCAGCTTaGGTTCGGGCTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: KKRPRIFMARTRNPLSDLSRSSA*VRAVRM
Trigger: CATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGA...TAAGTCAGAGAGTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGCTTGTAGGCGCAGTTaGAATAACAGGTGTTATGTC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFACRRS*NNRCYV
Trigger: GACATAACACCTGTTATTCCAACTGCGCCTACAAGC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTCCACCAGCAGAAGATaGTTTGCTTGTAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSTSRR*FACRRS
Trigger: ACTGCGCCTACAAGCAAACCATCTTCTGCTGGTGGA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCTGTTACACTGGGGTTaGTATTTGACCGTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFLLHWG*YLTVQR
Trigger: CCTTTGAACGGTCAAATACCAACCCCAGTGTAACAG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCAGCTGGAATGTCTTTaGTACTGCAGCTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFQLECL*YCSLEN
Trigger: GTTTTCCAAGCTGCAGTACCAAAGACATTCCAGCTG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCGACAAGAGCTGCAGCTaGAATGTCTTTGGTACTGCA +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPDKSCS*NVFGTA
Trigger: TGCAGTACCAAAGACATTCCAGCTGCAGCTCTTGTC...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGCGAGAAAGGGGAGCTaGAAGAGCCTTGGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKARKGS*KSLGSF
Trigger: GAAACTTCCAAGGCTCTTCCAGCTCCCCTTTCTCGC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCACTACAGCTAAAGAATaGCGAGAAAGGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPTTAKE*RERGAG
Trigger: TCCAGCTCCCCTTTCTCGCCATTCTTTAGCTGTAGT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CACCATATTCACCTATACACCATGCAGCCACTTGTACCAAAGGTTGTTGAGAATCCTGTCCTCCTCTCCTaGTCGTTTCCGTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: HHIHLYTMQPLVPKVVENPVLLS*SFPCPR
Trigger: ACGAGGACACGGAAACGACCAGGAGAGGAGGACAGG...ATTCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAATATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAACCCACAGCCTGGGACTaGACCCCTGAAACGGCCCGA +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQPTAWD*TPETAR
Trigger: TCGGGCCGTTTCAGGGGTCCAGTCCCAGGCTGTGGG...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR CCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCATTACCCTGAGCGAGTaGTTCGATGGATCTCCTACA +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPITLSE*FDGSPT
Trigger: TGTAGGAGATCCATCGAACCACTCGCTCAGGGTAAT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569748.5
3UTR CAA 72 bp TGTGAACACCAAGTACTGCCAGATGTGCTGACGTCCTaGCACGATCTTGTGATCCCAATCTTTGCACACGAA +
Preference number: 4 (lower is better)
Translates to: CEHQVLPDVLTS*HDLVIPIFAHE
Trigger: TTCGTGTGCAAAGATTGGGATCACAAGATCGTGCAAGGACGTCAGCACATCTGGCAGTACTTGGTGTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGGCCCGAAACCTCGAATaGAACCAGCAGCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARARNLE*NQQLRG
Trigger: CCCCCGGAGCTGCTGGTTTCATTCGAGGTTTCGGGC...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR TCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTTCTTCTCTAAAAGATaGCCGGATTGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFFFSKR*PDCSTF
Trigger: GAATGTGCTGCAATCCGGTCATCTTTTAGAGAAGAA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGACTTTCCTGATGACATaGACAGCACACAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKTFLMT*TAHSAA
Trigger: GGCAGCACTGTGTGCTGTTCATGTCATCAGGAAAGT...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp ACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATCTCCACACTGCTCACACATTTCTGTaGGGAGGACTACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: TKNCFVQALDSIGMHLHTAHTFL*GGLQMC
Trigger: ACACATCTGTAGTCCTCCTCACAGAAATGTGTGAGC...AGTGTGGAGATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR TCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGCAAAAAGGGGTCACTaGTACCAGAAACATCATGTT +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFAKRGH*YQKHHV
Trigger: AACATGATGTTTCTGGTATCAGTGACCCCTTTTTGC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATCATCCTCTGTTACCTaGATAGGCTCTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKSSSVT*IGSSSS
Trigger: TGAAGAGGAAGAGCCTATTCAGGTAACAGAGGATGA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGGTTTACAGTACAAGTaGATCGAGTGGAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFGLQYK*IEWKAS
Trigger: TGAAGCTTTCCACTCGATTCACTTGTACTGTAAACC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTGGTCACTTTTTCCATaGCAGGCATTCTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFWSLFP*QAFSQV
Trigger: TACTTGAGAGAATGCCTGTCATGGAAAAAGTGACCA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCACTGGGGTTGGTATTTaGCCGTTCAAAGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPTGVGI*PFKGEF
Trigger: GAATTCACCTTTGAACGGTCAAATACCAACCCCAGT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATCGCAGCTGTTGCTTCTaGGGGTTCAGAACTTTAATG +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNRSCCF*GFRTLM
Trigger: CATTAAAGTTCTGAACCCTCAGAAGCAACAGCTGCG...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCATGGAGACTATTCATaGCTACAGCTAAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFHGDYS*LQLKNG
Trigger: GCCATTCTTTAGCTGTAGTCATGAATAGTCTCCATG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAAACTTCACACACTATTaGGGAAACTTCGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKNFTHY*GNFAPC
Trigger: ACAGGGAGCGAAGTTTCCTCAATAGTGTGTGAAGTT...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp GGATTAAATTGGGGACTGCATCATCACGAACATAACTTCCTGCCGTTGTCAAAATCTCTGAGGAGCCCATaGAGCCGAGGGTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: GLNWGLHHHEHNFLPLSKSLRSP*SRGYKV
Trigger: CACTTTGTACCCTCGGCTGCATGGGCTCCTCAGAGA...TTTTGACAACGGCAGGAAGTTATGTTCGTGATGATGCAGTCCCCAATTTAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGACAGTCCACAATTGTaGTTCTGTGCCTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNDSPQL*FCASVL
Trigger: CAGTACAGAGGCACAGAAGCACAATTGTGGACTGTC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCTTCACCTATACACCATaGAGCCACTTGTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPFTYTP*SHLYQR
Trigger: CCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAA...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCGTTCCACATCAATGCTaGTTCCGTAGATGGAAACCA +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPVPHQC*FRRWKP
Trigger: TGGTTTCCATCTACGGAAGCAGCATTGATGTGGAAC...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGTTCCACATCAATGCTaGTTCCGTAGATGGAAACCA +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKVPHQC*FRRWKP
Trigger: TGGTTTCCATCTACGGAAGCAGCATTGATGTGGAAC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGCTGGAGCACCTGTAAGGTTGATGTCTCCCAGCAAATCAAGAAGTTCTCCACCGTTCCACATCAATGCTaGTTCCGTAGATGGAAACCA +
Preference number: 4 (lower is better)
Translates to: SWSTCKVDVSQQIKKFSTVPHQC*FRRWKP
Trigger: TGGTTTCCATCTACGGAAGCAGCATTGATGTGGAAC...GGTGGAGAACTTCTTGATTTGCTGGGAGACATCAACCTTACAGGTGCTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCTATTCTACTGCCCTCTaGTGGAGTTCCACATCAATG +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPYSTAL*WSSTSM
Trigger: CATTGATGTGGAACTCCAGCAGAGGGCAGTAGAATA...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATATTCTACTGCCCTCTaGTGGAGTTCCACATCAATG +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKYSTAL*WSSTSM
Trigger: CATTGATGTGGAACTCCAGCAGAGGGCAGTAGAATA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGTCTCTCCATTTGTCTaGACAATCTCAGTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNVSPFV*TISVGP
Trigger: TGGCCCTACTGAGATTGTGCAGACAAATGGAGAGAC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGGAGAAGAGGAAGAGTaGAAAGTAGCCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKGEEEE*KVASRS
Trigger: GCTTCTGGAGGCTACTTTGCACTCTTCCTCTTCTCC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGAAGGGGCAACTCTTTaGTGCAGAGACAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNEGATL*CRDKVS
Trigger: ACTCACTTTGTCTCTGCAGCAAAGAGTTGCCCCTTC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAATAAATACCCCACCTTaGCCAGTCCACAGAGAAACA +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKINTPP*PVHRET
Trigger: TGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTAT...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATAGCAACTGTGCAAGCTaGTTCGGCATTTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSNCAS*FGISFC
Trigger: ACAGAAGGAAATGCCGAAGCAGCTTGCACAGTTGCT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299980.9
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTCATTCTTTCTGAAATaGGCAAGCATGTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFSFFLK*ASMSGL
Trigger: AAGCCCAGACATGCTTGCGCATTTCAGAAAGAATGA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393512.7
CDS-3UTR GCA 90 bp GGGCACAAGCTTTCTGAAATGCGCAAGCATGTCTGGGCTTCGCTCACACATTTCAACAGCACACAGTGCTaGCTTGCTGTAATACTGTTT +
Preference number: 4 (lower is better)
Translates to: GHKLSEMRKHVWASLTHFNSTQC*LAVILF
Trigger: AAACAGTATTACAGCAAGGCAGCACTGTGTGCTGTT...GAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCATTTCAGAAAGCTTGTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATAGGACTACAGATGTGTaGAGGACACCATGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNRTTDV*RTPWFF
Trigger: GAAGAACCATGGTGTCCTCCACACATCTGTAGTCCT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGACCCAGGATATTTATaGCTAGGACTCGCAATCCAC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNDPGYL*LGLAIH
Trigger: GTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp GCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACGAATCCAATAAATCATTGGCCTaGCTGGTGGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ARKIPDAQSALNSGSHESNKSLA*LVGCGP
Trigger: TGGGCCACAGCCCACCAGCCAGGCCAATGATTTATT...GGATTCGTGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTCCACCAGCAGAAGATaGTTTGCTTGTAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKSTSRR*FACRRS
Trigger: ACTGCGCCTACAAGCAAACCATCTTCTGCTGGTGGA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATCTAGCTCTGTGCTGTTaGAGGCCTGTATCGTTATCA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNLALCC*RPVSLS
Trigger: TGATAACGATACAGGCCTCCAACAGCACAGAGCTAG...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACAGCTGGAATGTCTTTaGTACTGCAGCTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKQLECL*YCSLEN
Trigger: GTTTTCCAAGCTGCAGTACCAAAGACATTCCAGCTG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATACTACAGCTAAAGAATaGCGAGAAAGGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNTTAKE*RERGAG
Trigger: TCCAGCTCCCCTTTCTCGCCATTCTTTAGCTGTAGT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp TCATGTTCTGGTGAATATCCGGACATGATGAGGTTCTTTAAAATACGAACTAATTCAGCTCCCGCAATCTaGTGGGGGCTGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: SCSGEYPDMMRFFKIRTNSAPAI*WGLASS
Trigger: CGAGGATGCCAGCCCCCATCAGATTGCGGGAGCTGA...ATTAGTTCGTATTTTAAAGAACCTCATCATGTCCGGATATTCACCAGAACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000565009.5
CDS-3UTR TCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCTTCTTCTCTAAAAGATaGCCGGATTGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPFFSKR*PDCSTF
Trigger: GAATGTGCTGCAATCCGGTCATCTTTTAGAGAAGAA...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp ATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCACTCTCTGACTACTTTCCTGATGACATaGACAGCACACAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: IRNDPGYLWLGLAIHSLTTFLMT*TAHSAA
Trigger: GGCAGCACTGTGTGCTGTTCATGTCATCAGGAAAGT...AGTCAGAGAGTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGCTCACACATTTCTGTaGGGAGGACTACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKAHTFL*GGLQMC
Trigger: ACACATCTGTAGTCCTCCTCACAGAAATGTGTGAGC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCTCTGTACTGCATTATaGTCTGTCTGTACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPLCTAL*SVCTVF
Trigger: GAAGACTGTACAGACAGATCATAATGCAGTACAGAG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTCATCCTCTGTTACCTaGATAGGCTCTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSSSVT*IGSSSS
Trigger: TGAAGAGGAAGAGCCTATTCAGGTAACAGAGGATGA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATGGTCACTTTTTCCATaGCAGGCATTCTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKWSLFP*QAFSQV
Trigger: TACTTGAGAGAATGCCTGTCATGGAAAAAGTGACCA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCTGCAGCAATATCATTaGAGAGAGGCTGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPLQQYH*REAVMK
Trigger: TTTCATCACAGCCTCTCTTCAATGATATTGCTGCAG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATACTGGGGTTGGTATTTaGCCGTTCAAAGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNTGVGI*PFKGEF
Trigger: GAATTCACCTTTGAACGGTCAAATACCAACCCCAGT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTATTGCTGAGCCCTTGTaGTTATATGTAAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFIAEPL*LYVSLI
Trigger: GATCAAGCTTACATATAATCACAAGGGCTCAGCAAT...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATAACTTCACACACTATTaGGGAAACTTCGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNNFTHY*GNFAPC
Trigger: ACAGGGAGCGAAGTTTCCTCAATAGTGTGTGAAGTT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp TTGAGAATAATCACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGTACTGCCAGATGTGCTaGCGTCCTTGCACGATCTTG +
Preference number: 4 (lower is better)
Translates to: LRIITKNCFVQALDSIGMYCQMC*RPCTIL
Trigger: CAAGATCGTGCAAGGACGTCAGCACATCTGGCAGTA...CATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTTCAGCTCCCGCAATCTaGTGGGGGCTGGCATCCTTA +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSSAPAI*WGLASL
Trigger: TAAGGATGCCAGCCCCCATCAGATTGCGGGAGCTGA...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR GCA 90 bp TACTTTTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCTCTGAGGAGCCCATaGAGCCGAGGGTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: YFSAARKIPDAQSALNSGSLRSP*SRGYKV
Trigger: CACTTTGTACCCTCGGCTGCATGGGCTCCTCAGAGA...GCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGACAGTCCACAATTGTaGTTCTGTGCCTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKDSPQL*FCASVL
Trigger: CAGTACAGAGGCACAGAAGCACAATTGTGGACTGTC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp GCAGCAGCTGGAGCACCTGTAAGGTTGATGTCTCCCAGCAAATCAAGAAGTTCTATAATCACCAAGAATTaGTTTGTACAGGCGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AAAGAPVRLMSPSKSRSSIITKN*FVQALD
Trigger: GTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTAT...AGAACTTCTTGATTTGCTGGGAGACATCAACCTTACAGGTGCTCCAGCTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGTTCCACATCAATGCTaGTTCCGTAGATGGAAACCA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNVPHQC*FRRWKP
Trigger: TGGTTTCCATCTACGGAAGCAGCATTGATGTGGAAC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGTCTCTCCATTTGTCTaGACAATCTCAGTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKVSPFV*TISVGP
Trigger: TGGCCCTACTGAGATTGTGCAGACAAATGGAGAGAC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CCTCTTCACACTGGCCAGATACAAGAAGATCACCATATTCACCTATACACCATGGCCATTCTTACTGTATaGTGTGATGGAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: PLHTGQIQEDHHIHLYTMAILTV*CDGGDA
Trigger: GGCATCCCCTCCATCACAGCATACAGTAAGAATGGC...CATGGTGTATAGGTGAATATGGTGATCTTCTTGTATCTGGCCAGTGTGAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTCATATCTAGCTCTGTaGTGTTGGAGGCCTGTATCG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKSYLAL*CWRPVS
Trigger: CGATACAGGCCTCCAACAGCACAGAGCTAGATATGA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGAAGGGGCAACTCTTTaGTGCAGAGACAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKEGATL*CRDKVS
Trigger: ACTCACTTTGTCTCTGCAGCAAAGAGTTGCCCCTTC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATATAAATACCCCACCTTaGCCAGTCCACAGAGAAACA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNINTPP*PVHRET
Trigger: TGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTAT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCATTTCCATTCCGAATaGCAGATGTTAAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFHFHSE*QMLKVP
Trigger: AGGCACTTTTAACATCTGGCATTCGGAATGGAAATG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGTGTGTATACAGCAATaGACAGAAAAGGCTACCAGG +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNVCIQQ*TEKATR
Trigger: CCTGGTAGCCTTTTCTGTGCATTGCTGTATACACAC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTCTGTAAAGCAACTGTaGAAGCTGCTTCGGCATTTC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSVKQL*KLLRHF
Trigger: GAAATGCCGAAGCAGCTTGCACAGTTGCTTTACAGA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299980.9
CDS-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCTGCCGAGGACTATTTaGCAAGGAGGAGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSLPRTI*QGGGDC
Trigger: GCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAG...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR GCA 90 bp TCTAGTGGAGCTGGTTCTGTCTCTCCATTTGTCTGCACAATCTCAGTAGGGCCAAAAACTCAATTCCATTaGACGCCTTGCAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: SSGAGSVSPFVCTISVGPKTQFH*TPCRRE
Trigger: TTCCCTTCTGCAAGGCGTGCAATGGAATTGAGTTTT...TGGCCCTACTGAGATTGTGCAGACAAATGGAGAGACAGAACCAGCTCCACTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATCTTCCTCTTCACACTaGCCAGATACAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKSSSSH*PDTRRS
Trigger: TGATCTTCTTGTATCTGGCCAGTGTGAAGAGGAAGA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp AGCTGGAGCACCTGTAAGGTTGATGTCTCCCAGCAAATCAAGAAGTTCTCCACCTCTTCCTCTTCACACTaGCCAGATACAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: SWSTCKVDVSQQIKKFSTSSSSH*PDTRRS
Trigger: TGATCTTCTTGTATCTGGCCAGTGTGAAGAGGAAGA...GGTGGAGAACTTCTTGATTTGCTGGGAGACATCAACCTTACAGGTGCTCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGAATCATTGGCCTGGCTaGTGGGCTGTGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARNHWPG*WAVAQR
Trigger: CCTCTGGGCCACAGCCCACCAGCCAGGCCAATGATT...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGCTTGTAGGCGCAGTTaGAATAACAGGTGTTATGTC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNACRRS*NNRCYV
Trigger: GACATAACACCTGTTATTCCAACTGCGCCTACAAGC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp TCTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCGGCAGGAGCAGCAGCTaGAGCACCTGTAAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: SFIMPRILFPFTRAKLNSGRSSS*STCKVD
Trigger: ATCAACCTTACAGGTGCTCCAGCTGCTGCTCCTGCC...GGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATCTGTTACACTGGGGTTaGTATTTGACCGTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNLLHWG*YLTVQR
Trigger: CCTTTGAACGGTCAAATACCAACCCCAGTGTAACAG...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTTATCACTGTTACACTaGGGTTGGTATTTGACCGTT +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFLSLLH*GWYLTV
Trigger: AACGGTCAAATACCAACCCCAGTGTAACAGTGATAA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTTTGGTACTGCAGCTTaGAAAACAAAGTCCGTCATA +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFFGTAA*KTKSVI
Trigger: TATGACGGACTTTGTTTTCCAAGCTGCAGTACCAAA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATCAGCTGGAATGTCTTTaGTACTGCAGCTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNQLECL*YCSLEN
Trigger: GTTTTCCAAGCTGCAGTACCAAAGACATTCCAGCTG...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGACAAGAGCTGCAGCTaGAATGTCTTTGGTACTGCA +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKDKSCS*NVFGTA
Trigger: TGCAGTACCAAAGACATTCCAGCTGCAGCTCTTGTC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTTAAATATGCTTGGGTaGGAAAGTGACCTGAGAATC +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFLNMLG*ESDLRI
Trigger: GATTCTCAGGTCACTTTCCCACCCAAGCATATTTAA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564155.5
3UTR CAA 72 bp TGGAAAACAAAGTCCGTCATATCTAGCTCTGTGCTGTaGGAGGCCTGTATCGTTATCACTGTTACACTGGGG +
Preference number: 4 (lower is better)
Translates to: WKTKSVISSSVL*EACIVITVTLG
Trigger: CCCCAGTGTAACAGTGATAACGATACAGGCCTCCAACAGCACAGAGCTAGATATGACGGACTTTGTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTTCTTCTCTAAAAGATaGCCGGATTGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNFFSKR*PDCSTF
Trigger: GAATGTGCTGCAATCCGGTCATCTTTTAGAGAAGAA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp CTTCCTGCCGTTGTCAAAACACGCATAATTGTGTCTATATGCCATCGTTTGGAAACTTTCCTGATGACATaGACAGCACACAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LPAVVKTRIIVSICHRLETFLMT*TAHSAA
Trigger: GGCAGCACTGTGTGCTGTTCATGTCATCAGGAAAGT...TTCCAAACGATGGCATATAGACACAATTATGCGTGTTTTGACAACGGCAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATAACATCATGTTCTGGTaGATATCCGGACATGATGAG +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNNIMFW*ISGHDE
Trigger: CTCATCATGTCCGGATATTCACCAGAACATGATGTT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp CAGCTTGGAAAACAAAGTCCGTCATATCTAGCTCTGTGCTGTTGGAGGCCTGTAAACATCATGTTCTGGTaGATATCCGGACATGATGAG +
Preference number: 4 (lower is better)
Translates to: QLGKQSPSYLALCCWRPVNIMFW*ISGHDE
Trigger: CTCATCATGTCCGGATATTCACCAGAACATGATGTT...TACAGGCCTCCAACAGCACAGAGCTAGATATGACGGACTTTGTTTTCCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp GGGCACAAGCTTTCTGAAATGCGCAAGCATGTCTGGGCTTCGCTCACACATTTCATTCATAGCTTCACTTaGATCATCATCATTTCGTCC +
Preference number: 4 (lower is better)
Translates to: GHKLSEMRKHVWASLTHFIHSFT*IIIISS
Trigger: GGACGAAATGATGATGATTCAAGTGAAGCTATGAAT...GAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCATTTCAGAAAGCTTGTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTCATCCTCTGTTACCTaGATAGGCTCTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKSSSVT*IGSSSS
Trigger: TGAAGAGGAAGAGCCTATTCAGGTAACAGAGGATGA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTGGTCACTTTTTCCATaGCAGGCATTCTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNWSLFP*QAFSQV
Trigger: TACTTGAGAGAATGCCTGTCATGGAAAAAGTGACCA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp TCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGTCTTACTGTATGCTGTaGTGGAGGGGATGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSCLGYYSHLPGQNSIPLSYCML*WRGCLQ
Trigger: CTGCAGGCATCCCCTCCATCACAGCATACAGTAAGA...CAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATTGACCGTTCAAAGGTaGATTCTATCTTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKLTVQR*ILSSSH
Trigger: ATGGCTTGAAGATAGAATTCACCTTTGAACGGTCAA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCTTCCCAGAGTTCCTTTaGTTGAGTGGGATAAAGAAT +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPFPEFL*LSGIKN
Trigger: ATTCTTTATCCCACTCAATCAAAGGAACTCTGGGAA...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTAGAATTATTAGACGCTaGCGTCCGCAGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSRIIRR*RPQGQE
Trigger: CTCCTGGCCCTGCGGACGTCAGCGTCTAATAATTCT...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR TCA 90 bp TTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACCTTGCACGATCTTGTaGTCCCAATCTTTGCACACG +
Preference number: 4 (lower is better)
Translates to: FCSKKDSRCTVCFKFWLTPCTIL*SQSLHT
Trigger: CGTGTGCAAAGATTGGGATCACAAGATCGTGCAAGG...TGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp TTGAGAATAATCACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCAGGTATGCACTCTGTaGACACCAAGTACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LRIITKNCFVQALDSIGMQVCTL*TPSTAR
Trigger: TCTGGCAGTACTTGGTGTTCACAGAGTGCATACCTG...CATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp GTCAGAGCCACATATCTAATATTCTTGTCATTGTTCAATAAGAAACGACCCAGGTCTCTGAGGAGCCCATaGAGCCGAGGGTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: VRATYLIFLSLFNKKRPRSLRSP*SRGYKV
Trigger: CACTTTGTACCCTCGGCTGCATGGGCTCCTCAGAGA...CCTGGGTCGTTTCTTATTGAACAATGACAAGAATATTAGATATGTGGCTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGACAAGCTTTCTGAAATaGGCAAGCATGTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKTSFLK*ASMSGL
Trigger: AAGCCCAGACATGCTTGCGCATTTCAGAAAGCTTGT...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTCCAGATGCACAGTCTaGTTTAAATTCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSRCTV*FKFWLT
Trigger: TGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGATAAATACCCCACCTTaGCCAGTCCACAGAGAAACA +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKINTPP*PVHRET
Trigger: TGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTAT...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGTGTGTATACAGCAATaGACAGAAAAGGCTACCAGG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKVCIQQ*TEKATR
Trigger: CCTGGTAGCCTTTTCTGTGCATTGCTGTATACACAC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGCACCATATCCTTCATaGCAAATCTCAACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKAPYPS*QISTKA
Trigger: AGCTTTTGTTGAGATTTGGCATGAAGGATATGGTGC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCATGGACAGATTTCCGTaGTCAGGGATATATAATAGG +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPMDRFP*SGIYNR
Trigger: CCTATTATATATCCCTGAGCACGGAAATCTGTCCAT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR CCA 90 bp TTAGTGGCAACCTGTGCTAATATATCATTCATAGCTTCACTTGAATCATCATCACAATCTGATGGGGGCTaGCATCCTCGGCCCGAAACC +
Preference number: 4 (lower is better)
Translates to: LVATCANISFIASLESSSQSDGG*HPRPET
Trigger: GGTTTCGGGCCGAGGATGCCAGCCCCCATCAGATTG...TGATGATGATTCAAGTGAAGCTATGAATGATATATTAGCACAGGTTGCCACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000565009.5
CDS-3UTR CCA 90 bp TCAGTATTAGTGGCAACCTGTGCTAATATATCATTCATAGCTTCACTTGAATCACAATCTGATGGGGGCTaGCATCCTCGGCCCGAAACC +
Preference number: 4 (lower is better)
Translates to: SVLVATCANISFIASLESQSDGG*HPRPET
Trigger: GGTTTCGGGCCGAGGATGCCAGCCCCCATCAGATTG...TGATTCAAGTGAAGCTATGAATGATATATTAGCACAGGTTGCCACTAATACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000565009.5
CDS-3UTR CCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGTGTGGAGGACACCATaGTTCTTCTCATTCAATAAA +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKVWRTP*FFSFNK
Trigger: TTTATTGAATGAGAAGAACCATGGTGTCCTCCACAC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp CATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGAGGACTACAGATGTGTaGAGGACACCATGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: HASDIIPIYQGKTQFHCTRTTDV*RTPWFF
Trigger: GAAGAACCATGGTGTCCTCCACACATCTGTAGTCCT...CGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGTCTGCTTTAAATTCTaGCTCACACGAATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKVCFKF*LTRIQK
Trigger: TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGAC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCTATATGCCATCGTTTaGAAGGTGCATACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPLYAIV*KVHTFL
Trigger: CAGAAAAGTATGCACCTTCCAAACGATGGCATATAG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACTATATGCCATCGTTTaGAAGGTGCATACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKLYAIV*KVHTFL
Trigger: CAGAAAAGTATGCACCTTCCAAACGATGGCATATAG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTTAACTGGATTAAATTaGGGACTGCATCATCACGAA +
Preference number: 4 (lower is better)
Translates to: SSLQKQPASTVEERTLVFLTGLN*GLHHHE
Trigger: TTCGTGATGATGCAGTCCCCAATTTAATCCAGTTAA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCAGGGCAGACCTCATGTaGTCATATTTCTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPRADLM*SYFLKS
Trigger: ACTTTTCAAGAAATATGACCACATGAGGTCTGCCCT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGCTGTTACACTGGGGTTaGTATTTGACCGTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKLLHWG*YLTVQR
Trigger: CCTTTGAACGGTCAAATACCAACCCCAGTGTAACAG...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CCTCTTCACACTGGCCAGATACAAGAAGATCACCATATTCACCTATACACCATGCTAGCTCTGTGCTGTTaGAGGCCTGTATCGTTATCA +
Preference number: 4 (lower is better)
Translates to: PLHTGQIQEDHHIHLYTMLALCC*RPVSLS
Trigger: TGATAACGATACAGGCCTCCAACAGCACAGAGCTAG...CATGGTGTATAGGTGAATATGGTGATCTTCTTGTATCTGGCCAGTGTGAAGAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp ATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGCCGTTTTATTTCAACACCCACAGCCTaGGACTGGACCCCTGAAACG +
Preference number: 4 (lower is better)
Translates to: ILFPFTRAKLNSIARRFISTPTA*DWTPET
Trigger: CGTTTCAGGGGTCCAGTCCCAGGCTGTGGGTGTTGA...AATAAAACGGCGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAATCAACACCCACAGCCTaGGACTGGACCCCTGAAACG +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQSTPTA*DWTPET
Trigger: CGTTTCAGGGGTCCAGTCCCAGGCTGTGGGTGTTGA...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR TCA 90 bp TACTTTTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCACTTTCCTGATGACATaGACAGCACACAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: YFSAARKIPDAQSALNSGTFLMT*TAHSAA
Trigger: GGCAGCACTGTGTGCTGTTCATGTCATCAGGAAAGT...GCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGAACATCATGTTCTGGTaGATATCCGGACATGATGAG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKNIMFW*ISGHDE
Trigger: CTCATCATGTCCGGATATTCACCAGAACATGATGTT...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCATTCATAGCTTCACTTaGATCATCATCATTTCGTCC +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPIHSFT*IIIISS
Trigger: GGACGAAATGATGATGATTCAAGTGAAGCTATGAAT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTCGCAATCCACTCTCTaGCTTAATATCCATGATAGT +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSQSTL*LNIHDS
Trigger: ACTATCATGGATATTAAGTCAGAGAGTGGATTGCGA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGCTCTGTACTGCATTATaGTCTGTCTGTACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKLCTAL*SVCTVF
Trigger: GAAGACTGTACAGACAGATCATAATGCAGTACAGAG...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp CGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGCCTTGCATCATCCTCTGTTACCTaGATAGGCTCTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RILFPFTRAKLNSIARLASSSVT*IGSSSS
Trigger: TGAAGAGGAAGAGCCTATTCAGGTAACAGAGGATGA...TGCAAGGCGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGGTTTACAGTACAAGTaGATCGAGTGGAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKGLQYK*IEWKAS
Trigger: TGAAGCTTTCCACTCGATTCACTTGTACTGTAAACC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTGGTCACTTTTTCCATaGCAGGCATTCTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKWSLFP*QAFSQV
Trigger: TACTTGAGAGAATGCCTGTCATGGAAAAAGTGACCA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATATTGCTGAGCCCTTGTaGTTATATGTAAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNIAEPL*LYVSLI
Trigger: GATCAAGCTTACATATAATCACAAGGGCTCAGCAAT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAACAGGCGGAGGGATCCTaGGGAAGGAGGGAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQQAEGS*GRREFL
Trigger: TAAAAACTCCCTCCTTCCTCAGGATCCCTCCGCCTG...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGCTTTTCATTCTTTCTaGAATGCGCAAGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKAFHSF*NAQACL
Trigger: CAGACATGCTTGCGCATTTCAGAAAGAATGAAAAGC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393512.7
CDS-3UTR GCA 90 bp AACTTTCCTGATGACATGAACAGCACACAGTGCTGCCTTGCTGTAATACTGTTTCTTCTCTACCTCTCCTaGAAGATCTCTGCACATCTC +
Preference number: 4 (lower is better)
Translates to: NFPDDMNSTQCCLAVILFLLYLS*KISAHL
Trigger: GAGATGTGCAGAGATCTTGCAGGAGAGGTAGAGAAG...AAACAGTATTACAGCAAGGCAGCACTGTGTGCTGTTCATGTCATCAGGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR GCA 90 bp TCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGCCGTTTTATTGAGACATGACAGTCCACAATTGTaGTTCTGTGCCTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: SHLPGQNSIPLHAVLLRHDSPQL*FCASVL
Trigger: CAGTACAGAGGCACAGAAGCACAATTGTGGACTGTC...ATGTCTCAATAAAACGGCGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCATAATTGTGTCTATATaGCATCGTTTGGAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPIIVSI*HRLEGA
Trigger: TGCACCTTCCAAACGATGGCATATAGACACAATTAT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGATAATCACCAAGAATTaGTTTGTACAGGCGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKIITKN*FVQALD
Trigger: GTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTAT...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp CCATTTGTCTGCACAATCTCAGTAGGGCCATTTGTGGTCACTTTTTCCATGACATATTCTACTGCCCTCTaGTGGAGTTCCACATCAATG +
Preference number: 4 (lower is better)
Translates to: PFVCTISVGPFVVTFSMTYSTAL*WSSTSM
Trigger: CATTGATGTGGAACTCCAGCAGAGGGCAGTAGAATA...TGTCATGGAAAAAGTGACCACAAATGGCCCTACTGAGATTGTGCAGACAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp CGTACCTGCAAAAAGGGGTCACTGATACCAGAAACATCATGTTCTGGTGAATATGTCTCTCCATTTGTCTaGACAATCTCAGTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RTCKKGSLIPETSCSGEYVSPFV*TISVGP
Trigger: TGGCCCTACTGAGATTGTGCAGACAAATGGAGAGAC...ATATTCACCAGAACATGATGTTTCTGGTATCAGTGACCCCTTTTTGCAGGTACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGAATGTCTTTGGTACTaGAGCTTGGAAAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNECLWY*SLENKV
Trigger: GACTTTGTTTTCCAAGCTGCAGTACCAAAGACATTC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGGTCCCCGTGTTAAATaGTGGGACAATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSGPRVK*WDNAAA
Trigger: AGCAGCAGCATTGTCCCAGCATTTAACACGGGGACC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp GCTAGGACTCGCAATCCACTCTCTGACTTAATATCCATGATAGTCAAAACCGTTGCTACCTTTCTGAAATaGGCAAGCATGTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: ARTRNPLSDLISMIVKTVATFLK*ASMSGL
Trigger: AAGCCCAGACATGCTTGCGCATTTCAGAAAGGTAGC...AACGGTTTTGACTATCATGGATATTAAGTCAGAGAGTGGATTGCGAGTCCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAATCTCGTTCTTCAGCTTaGGTTCGGGCTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQSRSSA*VRAVRM
Trigger: CATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGA...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGCAGCACATTCTTTCTaGATCATTTCTCGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNAAHSF*IISRSS
Trigger: TGAAGAACGAGAAATGATCCAGAAAGAATGTGCTGC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGTGTGGAGGACACCATaGTTCTTCTCATTCAATAAA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNVWRTP*FFSFNK
Trigger: TTTATTGAATGAGAAGAACCATGGTGTCCTCCACAC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp TCATTGTTCAATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCAATGCGCAAGCATGTCTaGGCTTCGCTCACACATTTC +
Preference number: 4 (lower is better)
Translates to: SLFNKKRPRIFMARTRNPMRKHV*ASLTHF
Trigger: GAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCAT...TGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTATTGAACAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR CCA 90 bp TACTTTTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCATGCGCAAGCATGTCTaGGCTTCGCTCACACATTTC +
Preference number: 4 (lower is better)
Translates to: YFSAARKIPDAQSALNSGMRKHV*ASLTHF
Trigger: GAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCAT...GCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CCA 90 bp TTAACTGGATTAAATTGGGGACTGCATCATCACGAACATAACTTCCTGCCGTTGGACCCAGGATATTTATaGCTAGGACTCGCAATCCAC +
Preference number: 4 (lower is better)
Translates to: LTGLNWGLHHHEHNFLPLDPGYL*LGLAIH
Trigger: GTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTC...CAACGGCAGGAAGTTATGTTCGTGATGATGCAGTCCCCAATTTAATCCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGTCTGCTTTAAATTCTaGCTCACACGAATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNVCFKF*LTRIQK
Trigger: TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGAC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp CTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATCCACCAGCAGAAGATaGTTTGCTTGTAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: LSSCLGYYSHLPGQNSIPSTSRR*FACRRS
Trigger: ACTGCGCCTACAAGCAAACCATCTTCTGCTGGTGGA...TGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGGCAGGAGCAGCAGCTaGAGCACCTGTAAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQGRSSS*STCKVD
Trigger: ATCAACCTTACAGGTGCTCCAGCTGCTGCTCCTGCC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGCCTTGCACTGTTACACTGGGGTTaGTATTTGACCGTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: RILFPFTRAKLNSIARLALLHWG*YLTVQR
Trigger: CCTTTGAACGGTCAAATACCAACCCCAGTGTAACAG...TGCAAGGCGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTTTGGTACTGCAGCTTaGAAAACAAAGTCCGTCATA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNFGTAA*KTKSVI
Trigger: TATGACGGACTTTGTTTTCCAAGCTGCAGTACCAAA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGGAGCGAGTGGTTCGATaGATCTCCTACACCGAGTCC +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARERVVR*ISYTES
Trigger: GGACTCGGTGTAGGAGATCCATCGAACCACTCGCTC...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR CCA 90 bp CAGCTTGGAAAACAAAGTCCGTCATATCTAGCTCTGTGCTGTTGGAGGCCTGTAAAAATACGAACTAATTaGGGCACAAGCTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QLGKQSPSYLALCCWRPVKIRTN*GTSCRE
Trigger: TTCTCTGCAGCTTGTGCCCCAATTAGTTCGTATTTT...TACAGGCCTCCAACAGCACAGAGCTAGATATGACGGACTTTGTTTTCCAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565009.5
3UTR CAA 72 bp AGCAAATCAAGAAGTTCTCCACCAGCAGAAGATGGTTaGCTTGTAGGCGCAGTTGGAATAACAGGTGTTATG +
Preference number: 4 (lower is better)
Translates to: SKSRSSPPAEDG*LVGAVGITGVM
Trigger: CATAACACCTGTTATTCCAACTGCGCCTACAAGCAAACCATCTTCTGCTGGTGGAGAACTTCTTGATTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTACTTTCCTGATGACATaGACAGCACACAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSTFLMT*TAHSAA
Trigger: GGCAGCACTGTGTGCTGTTCATGTCATCAGGAAAGT...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTTGACCGTTCAAAGGTaGATTCTATCTTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKLTVQR*ILSSSH
Trigger: ATGGCTTGAAGATAGAATTCACCTTTGAACGGTCAA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp CGTACCTGCAAAAAGGGGTCACTGATACCAGAAACATCATGTTCTGGTGAATATACTGGGGTTGGTATTTaGCCGTTCAAAGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: RTCKKGSLIPETSCSGEYTGVGI*PFKGEF
Trigger: GAATTCACCTTTGAACGGTCAAATACCAACCCCAGT...ATATTCACCAGAACATGATGTTTCTGGTATCAGTGACCCCTTTTTGCAGGTACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp AGAAGATGGTTTGCTTGTAGGCGCAGTTGGAATAACAGGTGTTATGTCATTTCCAACTTCACACACTATTaGGGAAACTTCGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RRWFACRRSWNNRCYVISNFTHY*GNFAPC
Trigger: ACAGGGAGCGAAGTTTCCTCAATAGTGTGTGAAGTT...GGAAATGACATAACACCTGTTATTCCAACTGCGCCTACAAGCAAACCATCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp TCAGTATTAGTGGCAACCTGTGCTAATATATCATTCATAGCTTCACTTGAATCACAGGCGGAGGGATCCTaGGGAAGGAGGGAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: SVLVATCANISFIASLESQAEGS*GRREFL
Trigger: TAAAAACTCCCTCCTTCCTCAGGATCCCTCCGCCTG...TGATTCAAGTGAAGCTATGAATGATATATTAGCACAGGTTGCCACTAATACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp TTAAATTGGGGACTGCATCATCACGAACATAACTTCCTGCACTTCCAAAAGTTCCTTCTCTACCTCTCCTaGAAGATCTCTGCACATCTC +
Preference number: 4 (lower is better)
Translates to: LNWGLHHHEHNFLHFQKFLLYLS*KISAHL
Trigger: GAGATGTGCAGAGATCTTGCAGGAGAGGTAGAGAAG...GAACTTTTGGAAGTGCAGGAAGTTATGTTCGTGATGATGCAGTCCCCAATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp AACTTTCCTGATGACATGAACAGCACACAGTGCTGCCTTGCTGTAATACTGTTTACAAGCTTTCTGAAATaGGCAAGCATGTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: NFPDDMNSTQCCLAVILFTSFLK*ASMSGL
Trigger: AAGCCCAGACATGCTTGCGCATTTCAGAAAGCTTGT...AAACAGTATTACAGCAAGGCAGCACTGTGTGCTGTTCATGTCATCAGGAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR GCA 90 bp TACTTTTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCGACAGTCCACAATTGTaGTTCTGTGCCTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: YFSAARKIPDAQSALNSGDSPQL*FCASVL
Trigger: CAGTACAGAGGCACAGAAGCACAATTGTGGACTGTC...GCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp AATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATCTCCACACTATTAGTTCCAGATGCACAGTCTaGTTTAAATTCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: NCFVQALDSIGMHLHTISSRCTV*FKFWLT
Trigger: TGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGA...ACTAATAGTGTGGAGATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAAAGAAAGATTCCAGATaGACAGTCTGCTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKKKDSR*TVCFKF
Trigger: GAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTT...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp TTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACCATCGTTTGGAAGGTaGATACTTTTCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: FCSKKDSRCTVCFKFWLTPSFGR*ILFCSK
Trigger: CTTGCTGCAGAAAAGTATGCACCTTCCAAACGATGG...TGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATATAATTGTGTCTATATaGCATCGTTTGGAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LQKQPASTVEERTLVFNNIIVSI*HRLEGA
Trigger: TGCACCTTCCAAACGATGGCATATAGACACAATTAT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR GCA 90 bp AGAATAATCACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATTTCACCTATACACCATaGAGCCACTTGTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: RIITKNCFVQALDSIGMHFTYTP*SHLYQR
Trigger: CCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAA...ATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR GCA 90 bp TCTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCGATGGAGGGGATGCCTaGAGCAATATCATTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SFIMPRILFPFTRAKLNSDGGDA*SNIIEE
Trigger: CTCTTCAATGATATTGCTGCAGGCATCCCCTCCATC...GGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp CACTTGTACCAAAGGTTGTTGAGAATAATCACCAAGAATTGCTTTGTACAGGCGTCATATCTAGCTCTGTaGTGTTGGAGGCCTGTATCG +
Preference number: 4 (lower is better)
Translates to: HLYQRLLRIITKNCFVQASYLAL*CWRPVS
Trigger: CGATACAGGCCTCCAACAGCACAGAGCTAGATATGA...CGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAACAACCTTTGGTACAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGGTCCCCGTGTTAAATaGTGGGACAATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQGPRVK*WDNAAA
Trigger: AGCAGCAGCATTGTCCCAGCATTTAACACGGGGACC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTTTTTTCGCCATGGATTaGAGTCCTCTCCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSFFAMD*SPLLQT
Trigger: GGTCTGGAGGAGAGGACTGCAATCCATGGCGAAAAA...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCAAGAACTCGGACCCTaGCGAGGACTATTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARQELGP*RGLFAK
Trigger: CTTGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGCAGCACATTCTTTCTaGATCATTTCTCGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKAAHSF*IISRSS
Trigger: TGAAGAACGAGAAATGATCCAGAAAGAATGTGCTGC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGAATAAATCATTGGCCTaGCTGGTGGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARNKSLA*LVGCGP
Trigger: TGGGCCACAGCCCACCAGCCAGGCCAATGATTTATT...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTTATCACTGTTACACTaGGGTTGGTATTTGACCGTT +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKLSLLH*GWYLTV
Trigger: AACGGTCAAATACCAACCCCAGTGTAACAGTGATAA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTTTGGTACTGCAGCTTaGAAAACAAAGTCCGTCATA +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKFGTAA*KTKSVI
Trigger: TATGACGGACTTTGTTTTCCAAGCTGCAGTACCAAA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGCGAGAAAGGGGAGCTaGAAGAGCCTTGGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQARKGS*KSLGSF
Trigger: GAAACTTCCAAGGCTCTTCCAGCTCCCCTTTCTCGC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCAAAATACGAACTAATTaGGGCACAAGCTTTTCATTC +
Preference number: 4 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPKIRTN*GTSFSF
Trigger: GAATGAAAAGCTTGTGCCCCAATTAGTTCGTATTTT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393512.7
3UTR CAA 72 bp CTTGTACCAAAGGTTGTTGAGAATAATCACCAAGAATaGCTTTGTACAGGCGCTGGACAGTATAGGCATGCA +
Preference number: 4 (lower is better)
Translates to: LVPKVVENNHQE*LCTGAGQYRHA
Trigger: TGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAACAACCTTTGGTACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
3UTR CAA 72 bp TTGGAGGCCTGTATCGTTATCACTGTTACACTGGGGTaGGTATTTGACCGTTCAAAGGTGAATTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: LEACIVITVTLG*VFDRSKVNSIF
Trigger: GAAGATAGAATTCACCTTTGAACGGTCAAATACCAACCCCAGTGTAACAGTGATAACGATACAGGCCTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp AGAATAATCACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATTTCTTCTCTAAAAGATaGCCGGATTGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: RIITKNCFVQALDSIGMHFFSKR*PDCSTF
Trigger: GAATGTGCTGCAATCCGGTCATCTTTTAGAGAAGAA...ATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR TCA 90 bp TTGAGAATAATCACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGGCAAAAAGGGGTCACTaGTACCAGAAACATCATGTT +
Preference number: 4 (lower is better)
Translates to: LRIITKNCFVQALDSIGMAKRGH*YQKHHV
Trigger: AACATGATGTTTCTGGTATCAGTGACCCCTTTTTGC...CATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR TCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGATTCATAGCTTCACTTaGATCATCATCATTTCGTCC +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKIHSFT*IIIISS
Trigger: GGACGAAATGATGATGATTCAAGTGAAGCTATGAAT...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR TCA 90 bp AGAATAATCACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATCTGCAGCAATATCATTaGAGAGAGGCTGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: RIITKNCFVQALDSIGMHLQQYH*REAVMK
Trigger: TTTCATCACAGCCTCTCTTCAATGATATTGCTGCAG...ATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGTCAAAGTAAGTGTGTaGGGGCTCACTGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSVKVSV*GLTAYH
Trigger: GTGATAAGCAGTGAGCCCTCACACACTTACTTTGAC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299980.9
CDS-3UTR TCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTAGCCTAAAACTTCCGTaGCTGTCCAAACCACCTCAA +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSSLKLP*LSKPPQ
Trigger: TTGAGGTGGTTTGGACAGTCACGGAAGTTTTAGGCT...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299980.9
CDS-3UTR GCA 90 bp TGCATACTTTTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCCTTCTCTACCTCTCCTaGAAGATCTCTGCACATCTC +
Preference number: 4 (lower is better)
Translates to: CILFCSKKDSRCTVCFKFLLYLS*KISAHL
Trigger: GAGATGTGCAGAGATCTTGCAGGAGAGGTAGAGAAG...GAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAAAAGTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR GCA 90 bp TTAACTGGATTAAATTGGGGACTGCATCATCACGAACATAACTTCCTGCCGTTGTCCAGATGCACAGTCTaGTTTAAATTCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: LTGLNWGLHHHEHNFLPLSRCTV*FKFWLT
Trigger: TGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGA...CAACGGCAGGAAGTTATGTTCGTGATGATGCAGTCCCCAATTTAATCCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp ACTTCCTGCCGTTGTCAAAACACGCATAATTGTGTCTATATGCCATCGTTTGGAATAATCACCAAGAATTaGTTTGTACAGGCGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TSCRCQNTHNCVYMPSFGIITKN*FVQALD
Trigger: GTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTAT...TCCAAACGATGGCATATAGACACAATTATGCGTGTTTTGACAACGGCAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp CAAGAAGATCACCATATTCACCTATACACCATGCAGCCACTTGTACCAAAGGTTATAATCACCAAGAATTaGTTTGTACAGGCGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QEDHHIHLYTMQPLVPKVIITKN*FVQALD
Trigger: GTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTAT...AACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAATATGGTGATCTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR GCA 90 bp CTCAATTCCATTGCACGCCGTTTTATTGAGACATCCAAATCTTTAAGACAGTCCTTCACCTATACACCATaGAGCCACTTGTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: LNSIARRFIETSKSLRQSFTYTP*SHLYQR
Trigger: CCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAA...GGACTGTCTTAAAGATTTGGATGTCTCAATAAAACGGCGTGCAATGGAATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGCCATTCTTACTGTATaGTGTGATGGAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQAILTV*CDGGDA
Trigger: GGCATCCCCTCCATCACAGCATACAGTAAGAATGGC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CCTCTTCACACTGGCCAGATACAAGAAGATCACCATATTCACCTATACACCATGTGTGATCCCAATCTTTaGACACGAAATAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: PLHTGQIQEDHHIHLYTMCDPNL*TRNNQG
Trigger: TCCTTGGTTATTTCGTGTGCAAAGATTGGGATCACA...CATGGTGTATAGGTGAATATGGTGATCTTCTTGTATCTGGCCAGTGTGAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp CGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGCCTTGCAACGAACATAACTTCCTaGACTTCCAAAAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RILFPFTRAKLNSIARLATNITS*TSKSSK
Trigger: CTTGGAACTTTTGGAAGTGCAGGAAGTTATGTTCGT...TGCAAGGCGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp AATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATCTCCACACTATTAGTGCAGCACATTCTTTCTaGATCATTTCTCGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NCFVQALDSIGMHLHTISAAHSF*IISRSS
Trigger: TGAAGAACGAGAAATGATCCAGAAAGAATGTGCTGC...ACTAATAGTGTGGAGATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR CCA 90 bp GACATCCAAATCTTTAAGACAGTCCACAATTGTGCTTCTGTGCCTCTGTACTGCGTGTGGAGGACACCATaGTTCTTCTCATTCAATAAA +
Preference number: 4 (lower is better)
Translates to: DIQIFKTVHNCASVPLYCVWRTP*FFSFNK
Trigger: TTTATTGAATGAGAAGAACCATGGTGTCCTCCACAC...GCAGTACAGAGGCACAGAAGCACAATTGTGGACTGTCTTAAAGATTTGGATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CCA 90 bp GTCAGAGCCACATATCTAATATTCTTGTCATTGTTCAATAAGAAACGACCCAGGAGGACTACAGATGTGTaGAGGACACCATGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VRATYLIFLSLFNKKRPRRTTDV*RTPWFF
Trigger: GAAGAACCATGGTGTCCTCCACACATCTGTAGTCCT...CCTGGGTCGTTTCTTATTGAACAATGACAAGAATATTAGATATGTGGCTCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR CCA 90 bp TTGTCATTGTTCAATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATGACCCAGGATATTTATaGCTAGGACTCGCAATCCAC +
Preference number: 4 (lower is better)
Translates to: LSLFNKKRPRIFMARTRNDPGYL*LGLAIH
Trigger: GTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTC...ATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTATTGAACAATGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR CCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGACCCAGGATATTTATaGCTAGGACTCGCAATCCAC +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSDPGYL*LGLAIH
Trigger: GTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CCA 90 bp AATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATCTCCACACTATTAGTGTCTGCTTTAAATTCTaGCTCACACGAATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: NCFVQALDSIGMHLHTISVCFKF*LTRIQK
Trigger: TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGAC...ACTAATAGTGTGGAGATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CCA 90 bp AAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCACTCTCTGACTTACTATATGCCATCGTTTaGAAGGTGCATACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KKRPRIFMARTRNPLSDLLYAIV*KVHTFL
Trigger: CAGAAAAGTATGCACCTTCCAAACGATGGCATATAG...TAAGTCAGAGAGTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CCA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTTAACTGGATTAAATTaGGGACTGCATCATCACGAA +
Preference number: 4 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKLTGLN*GLHHHE
Trigger: TTCGTGATGATGCAGTCCCCAATTTAATCCAGTTAA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAATCCACCAGCAGAAGATaGTTTGCTTGTAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQSTSRR*FACRRS
Trigger: ACTGCGCCTACAAGCAAACCATCTTCTGCTGGTGGA...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGACAAGAGCTGCAGCTaGAATGTCTTTGGTACTGCA +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSDKSCS*NVFGTA
Trigger: TGCAGTACCAAAGACATTCCAGCTGCAGCTCTTGTC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp CTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTCTTCTCTAAAAGATaGCCGGATTGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: LSSCLGYYSHLPGQNSIPFFSKR*PDCSTF
Trigger: GAATGTGCTGCAATCCGGTCATCTTTTAGAGAAGAA...TGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR TCA 90 bp ACATCATGTTCTGGTGAATATCCGGACATGATGAGGTTCTTTAAAATACGAACTGCTCACACATTTCTGTaGGGAGGACTACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: TSCSGEYPDMMRFFKIRTAHTFL*GGLQMC
Trigger: ACACATCTGTAGTCCTCCTCACAGAAATGTGTGAGC...AGTTCGTATTTTAAAGAACCTCATCATGTCCGGATATTCACCAGAACATGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR TCA 90 bp AAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACGAATCCAGAAAAACATCATGTTCTGGTaGATATCCGGACATGATGAG +
Preference number: 4 (lower is better)
Translates to: KDSRCTVCFKFWLTRIQKNIMFW*ISGHDE
Trigger: CTCATCATGTCCGGATATTCACCAGAACATGATGTT...TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR TCA 90 bp GCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACGAATCCATTCATAGCTTCACTTaGATCATCATCATTTCGTCC +
Preference number: 4 (lower is better)
Translates to: ARKIPDAQSALNSGSHESIHSFT*IIIISS
Trigger: GGACGAAATGATGATGATTCAAGTGAAGCTATGAAT...GGATTCGTGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR TCA 90 bp GGATTAAATTGGGGACTGCATCATCACGAACATAACTTCCTGCCGTTGTCAAAATCGCAATCCACTCTCTaGCTTAATATCCATGATAGT +
Preference number: 4 (lower is better)
Translates to: GLNWGLHHHEHNFLPLSKSQSTL*LNIHDS
Trigger: ACTATCATGGATATTAAGTCAGAGAGTGGATTGCGA...TTTTGACAACGGCAGGAAGTTATGTTCGTGATGATGCAGTCCCCAATTTAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR TCA 90 bp CTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCACTCTGTACTGCATTATaGTCTGTCTGTACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSSCLGYYSHLPGQNSIPLCTAL*SVCTVF
Trigger: GAAGACTGTACAGACAGATCATAATGCAGTACAGAG...TGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR TCA 90 bp CACTTGTACCAAAGGTTGTTGAGAATAATCACCAAGAATTGCTTTGTACAGGCGCTCTGTACTGCATTATaGTCTGTCTGTACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: HLYQRLLRIITKNCFVQALCTAL*SVCTVF
Trigger: GAAGACTGTACAGACAGATCATAATGCAGTACAGAG...CGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAACAACCTTTGGTACAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR TCA 90 bp CATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCTTGACCGTTCAAAGGTaGATTCTATCTTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: HHASDIIPIYQGKTQFHCLTVQR*ILSSSH
Trigger: ATGGCTTGAAGATAGAATTCACCTTTGAACGGTCAA...GCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGAGTGGGATAAAGAATaGGAATGGTGCCAAACCCTC +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQEWDKE*EWCQTL
Trigger: GAGGGTTTGGCACCATTCTCATTCTTTATCCCACTC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGGAGTGGGATAAAGAATaGGAATGGTGCCAAACCCTC +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLAREWDKE*EWCQTL
Trigger: GAGGGTTTGGCACCATTCTCATTCTTTATCCCACTC...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGCTTGGGTGGGAAAGTaGCCTGAGAATCTACTTTAT +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSAWVGK*PENLLY
Trigger: ATAAAGTAGATTCTCAGGTCACTTTCCCACCCAAGC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564155.5
CDS-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAACTTCTCTACCTCTCCTaGAAGATCTCTGCACATCTC +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQLLYLS*KISAHL
Trigger: GAGATGTGCAGAGATCTTGCAGGAGAGGTAGAGAAG...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTACAAGCTTTCTGAAATaGGCAAGCATGTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSTSFLK*ASMSGL
Trigger: AAGCCCAGACATGCTTGCGCATTTCAGAAAGCTTGT...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGACAGTCCACAATTGTaGTTCTGTGCCTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQDSPQL*FCASVL
Trigger: CAGTACAGAGGCACAGAAGCACAATTGTGGACTGTC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR GCA 90 bp AATTGGGGACTGCATCATCACGAACATAACTTCCTGCCGTTGTCAAAACACGCAAAGAAAGATTCCAGATaGACAGTCTGCTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: NWGLHHHEHNFLPLSKHAKKDSR*TVCFKF
Trigger: GAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTT...TGCGTGTTTTGACAACGGCAGGAAGTTATGTTCGTGATGATGCAGTCCCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp AAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCACTCTCTGACTTAATAATTGTGTCTATATaGCATCGTTTGGAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: KKRPRIFMARTRNPLSDLIIVSI*HRLEGA
Trigger: TGCACCTTCCAAACGATGGCATATAGACACAATTAT...TAAGTCAGAGAGTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGTTCCACATCAATGCTaGTTCCGTAGATGGAAACCA +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSVPHQC*FRRWKP
Trigger: TGGTTTCCATCTACGGAAGCAGCATTGATGTGGAAC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTTGCATTATATTCTACTaGCCTCTGCTGGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSCIIFY*PLLEFH
Trigger: GTGGAACTCCAGCAGAGGGCAGTAGAATATAATGCA...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGATGGAGGGGATGCCTaGAGCAATATCATTGAAGAG +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQDGGDA*SNIIEE
Trigger: CTCTTCAATGATATTGCTGCAGGCATCCCCTCCATC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGGGGCAACTCTTTGCTaGAGAGACAAAGTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQGATLC*RDKVSV
Trigger: AACACTCACTTTGTCTCTGCAGCAAAGAGTTGCCCC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CTTCCTGCCGTTGTCAAAACACGCATAATTGTGTCTATATGCCATCGTTTGGAAGCAGCACATTCTTTCTaGATCATTTCTCGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LPAVVKTRIIVSICHRLEAAHSF*IISRSS
Trigger: TGAAGAACGAGAAATGATCCAGAAAGAATGTGCTGC...TTCCAAACGATGGCATATAGACACAATTATGCGTGTTTTGACAACGGCAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAAGGACTACAGATGTGTaGAGGACACCATGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQRTTDV*RTPWFF
Trigger: GAAGAACCATGGTGTCCTCCACACATCTGTAGTCCT...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CCA 90 bp CTTCCTGCCGTTGTCAAAACACGCATAATTGTGTCTATATGCCATCGTTTGGAAGTCTGCTTTAAATTCTaGCTCACACGAATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LPAVVKTRIIVSICHRLEVCFKF*LTRIQK
Trigger: TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGAC...TTCCAAACGATGGCATATAGACACAATTATGCGTGTTTTGACAACGGCAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGCTTGTAGGCGCAGTTaGAATAACAGGTGTTATGTC +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSACRRS*NNRCYV
Trigger: GACATAACACCTGTTATTCCAACTGCGCCTACAAGC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CTTAATTCGGTTTACAGTACAAGTGAATCGAGTGGAAAGCTTCATAATGGCAGTGCTTGTAGGCGCAGTTaGAATAACAGGTGTTATGTC +
Preference number: 4 (lower is better)
Translates to: LNSVYSTSESSGKLHNGSACRRS*NNRCYV
Trigger: GACATAACACCTGTTATTCCAACTGCGCCTACAAGC...ACTGCCATTATGAAGCTTTCCACTCGATTCACTTGTACTGTAAACCGAATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCTAGCTCTGTGCTGTTaGAGGCCTGTATCGTTATCA +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARLALCC*RPVSLS
Trigger: TGATAACGATACAGGCCTCCAACAGCACAGAGCTAG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGGACAAGAGCTGCAGCTaGAATGTCTTTGGTACTGCA +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARDKSCS*NVFGTA
Trigger: TGCAGTACCAAAGACATTCCAGCTGCAGCTCTTGTC...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp TATCCGGACATGATGAGGTTCTTTAAAATACGAACTAATTGGGGCACAAGCTTTAACATCATGTTCTGGTaGATATCCGGACATGATGAG +
Preference number: 4 (lower is better)
Translates to: YPDMMRFFKIRTNWGTSFNIMFW*ISGHDE
Trigger: CTCATCATGTCCGGATATTCACCAGAACATGATGTT...AAAGCTTGTGCCCCAATTAGTTCGTATTTTAAAGAACCTCATCATGTCCGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR TCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTAACATCATGTTCTGGTaGATATCCGGACATGATGAG +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSNIMFW*ISGHDE
Trigger: CTCATCATGTCCGGATATTCACCAGAACATGATGTT...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR TCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGCAAAAAGGGGTCACTaGTACCAGAAACATCATGTT +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSAKRGH*YQKHHV
Trigger: AACATGATGTTTCTGGTATCAGTGACCCCTTTTTGC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR TCA 90 bp GTCAGAGCCACATATCTAATATTCTTGTCATTGTTCAATAAGAAACGACCCAGGGCAAAAAGGGGTCACTaGTACCAGAAACATCATGTT +
Preference number: 4 (lower is better)
Translates to: VRATYLIFLSLFNKKRPRAKRGH*YQKHHV
Trigger: AACATGATGTTTCTGGTATCAGTGACCCCTTTTTGC...CCTGGGTCGTTTCTTATTGAACAATGACAAGAATATTAGATATGTGGCTCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR TCA 90 bp AAGAAGATCACCATATTCACCTATACACCATGCAGCCACTTGTACCAAAGGTTGATTCATAGCTTCACTTaGATCATCATCATTTCGTCC +
Preference number: 4 (lower is better)
Translates to: KKITIFTYTPCSHLYQRLIHSFT*IIIISS
Trigger: GGACGAAATGATGATGATTCAAGTGAAGCTATGAAT...CAACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAATATGGTGATCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR TCA 90 bp AAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACGAATCCAGAAATCGCAATCCACTCTCTaGCTTAATATCCATGATAGT +
Preference number: 4 (lower is better)
Translates to: KDSRCTVCFKFWLTRIQKSQSTL*LNIHDS
Trigger: ACTATCATGGATATTAAGTCAGAGAGTGGATTGCGA...TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
CDS-3UTR TCA 90 bp TCTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCTCGCAATCCACTCTCTaGCTTAATATCCATGATAGT +
Preference number: 4 (lower is better)
Translates to: SFIMPRILFPFTRAKLNSSQSTL*LNIHDS
Trigger: ACTATCATGGATATTAAGTCAGAGAGTGGATTGCGA...GGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
CDS-3UTR TCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAACTGGGGTTGGTATTTaGCCGTTCAAAGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQTGVGI*PFKGEF
Trigger: GAATTCACCTTTGAACGGTCAAATACCAACCCCAGT...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTTCCAGATGCACAGTCTaGTTTAAATTCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSSRCTV*FKFWLT
Trigger: TGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGA...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR GCA 90 bp TGCATACTTTTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTCCAGATGCACAGTCTaGTTTAAATTCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: CILFCSKKDSRCTVCFKFSRCTV*FKFWLT
Trigger: TGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGA...GAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAAAAGTATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp AATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATCTCCACACTATTAGTAAGAAAGATTCCAGATaGACAGTCTGCTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: NCFVQALDSIGMHLHTISKKDSR*TVCFKF
Trigger: GAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTT...ACTAATAGTGTGGAGATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCCATCGTTTGGAAGGTaGATACTTTTCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARPSFGR*ILFCSK
Trigger: CTTGCTGCAGAAAAGTATGCACCTTCCAAACGATGG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR GCA 90 bp ATCTCCACACTATTAGTTATTAACTGGATTAAATTGGGGACTGCATCATCACGACCATCGTTTGGAAGGTaGATACTTTTCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: ISTLLVINWIKLGTASSRPSFGR*ILFCSK
Trigger: CTTGCTGCAGAAAAGTATGCACCTTCCAAACGATGG...TCGTGATGATGCAGTCCCCAATTTAATCCAGTTAATAACTAATAGTGTGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAATTCACCTATACACCATaGAGCCACTTGTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQFTYTP*SHLYQR
Trigger: CCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAA...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGTGCATTATATTCTACTaGCCTCTGCTGGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARCIIFY*PLLEFH
Trigger: GTGGAACTCCAGCAGAGGGCAGTAGAATATAATGCA...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAATGCATTATATTCTACTaGCCTCTGCTGGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQCIIFY*PLLEFH
Trigger: GTGGAACTCCAGCAGAGGGCAGTAGAATATAATGCA...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CACCATATTCACCTATACACCATGCAGCCACTTGTACCAAAGGTTGTTGAGAATTTCCATTGCACGCCTTaGAGAAGGGAAAAATTAAAA +
Preference number: 4 (lower is better)
Translates to: HHIHLYTMQPLVPKVVENFHCTP*RREKLK
Trigger: TTTTAATTTTTCCCTTCTGCAAGGCGTGCAATGGAA...ATTCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAATATGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp CACTTGTACCAAAGGTTGTTGAGAATAATCACCAAGAATTGCTTTGTACAGGCGAGGGCAGACCTCATGTaGTCATATTTCTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: HLYQRLLRIITKNCFVQARADLM*SYFLKS
Trigger: ACTTTTCAAGAAATATGACCACATGAGGTCTGCCCT...CGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAACAACCTTTGGTACAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp TACTTTTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTTATCACTGTTACACTaGGGTTGGTATTTGACCGTT +
Preference number: 4 (lower is better)
Translates to: YFSAARKIPDAQSALNSGLSLLH*GWYLTV
Trigger: AACGGTCAAATACCAACCCCAGTGTAACAGTGATAA...GCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CCA 90 bp TCTTTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCTTTGGTACTGCAGCTTaGAAAACAAAGTCCGTCATA +
Preference number: 4 (lower is better)
Translates to: SFIMPRILFPFTRAKLNSFGTAA*KTKSVI
Trigger: TATGACGGACTTTGTTTTCCAAGCTGCAGTACCAAA...GGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGCAAAAAGGGGTCACTaGTACCAGAAACATCATGTT +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQAKRGH*YQKHHV
Trigger: AACATGATGTTTCTGGTATCAGTGACCCCTTTTTGC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR TCA 90 bp TATCCGGACATGATGAGGTTCTTTAAAATACGAACTAATTGGGGCACAAGCTTTTCGCAATCCACTCTCTaGCTTAATATCCATGATAGT +
Preference number: 4 (lower is better)
Translates to: YPDMMRFFKIRTNWGTSFSQSTL*LNIHDS
Trigger: ACTATCATGGATATTAAGTCAGAGAGTGGATTGCGA...AAAGCTTGTGCCCCAATTAGTTCGTATTTTAAAGAACCTCATCATGTCCGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR TCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCTCTGTACTGCATTATaGTCTGTCTGTACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARLCTAL*SVCTVF
Trigger: GAAGACTGTACAGACAGATCATAATGCAGTACAGAG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR TCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGGGTTTACAGTACAAGTaGATCGAGTGGAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARGLQYK*IEWKAS
Trigger: TGAAGCTTTCCACTCGATTCACTTGTACTGTAAACC...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR TCA 90 bp ACATCATGTTCTGGTGAATATCCGGACATGATGAGGTTCTTTAAAATACGAACTTGGTCACTTTTTCCATaGCAGGCATTCTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: TSCSGEYPDMMRFFKIRTWSLFP*QAFSQV
Trigger: TACTTGAGAGAATGCCTGTCATGGAAAAAGTGACCA...AGTTCGTATTTTAAAGAACCTCATCATGTCCGGATATTCACCAGAACATGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAACTGCAGCAATATCATTaGAGAGAGGCTGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQLQQYH*REAVMK
Trigger: TTTCATCACAGCCTCTCTTCAATGATATTGCTGCAG...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCTGCAGCAATATCATTaGAGAGAGGCTGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARLQQYH*REAVMK
Trigger: TTTCATCACAGCCTCTCTTCAATGATATTGCTGCAG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTTTGACCGTTCAAAGGTaGATTCTATCTTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSLTVQR*ILSSSH
Trigger: ATGGCTTGAAGATAGAATTCACCTTTGAACGGTCAA...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCATGGAGACTATTCATaGCTACAGCTAAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARHGDYS*LQLKNG
Trigger: GCCATTCTTTAGCTGTAGTCATGAATAGTCTCCATG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAACATGGAGACTATTCATaGCTACAGCTAAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQHGDYS*LQLKNG
Trigger: GCCATTCTTTAGCTGTAGTCATGAATAGTCTCCATG...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp AAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACGAATCCAGAAATTGAAGAATGTCTCATaGATAAGCAGGTCATCCAAA +
Preference number: 4 (lower is better)
Translates to: KDSRCTVCFKFWLTRIQKLKNVS*ISRSSK
Trigger: TTTGGATGACCTGCTTATTCATGAGACATTCTTCAA...TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGATAATCACCAAGAATTaGTTTGTACAGGCGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARIITKN*FVQALD
Trigger: GTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTAT...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR GCA 90 bp TTAGTGGCAACCTGTGCTAATATATCATTCATAGCTTCACTTGAATCATCATCATGCATTATATTCTACTaGCCTCTGCTGGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LVATCANISFIASLESSSCIIFY*PLLEFH
Trigger: GTGGAACTCCAGCAGAGGGCAGTAGAATATAATGCA...TGATGATGATTCAAGTGAAGCTATGAATGATATATTAGCACAGGTTGCCACTAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR GCA 90 bp TATCCGGACATGATGAGGTTCTTTAAAATACGAACTAATTGGGGCACAAGCTTTCTTAGGAATTTGGTATaGCACCTAGGATATATCCAG +
Preference number: 4 (lower is better)
Translates to: YPDMMRFFKIRTNWGTSFLRNLV*HLGYIQ
Trigger: CTGGATATATCCTAGGTGGCATACCAAATTCCTAAG...AAAGCTTGTGCCCCAATTAGTTCGTATTTTAAAGAACCTCATCATGTCCGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR GCA 90 bp GCATTTCCTACATTTTTACTAGTCTCAGTATTAGTGGCAACCTGTGCTAATATAATGAACAGCACACAGTaGTGCCTTGCTGTAATACTG +
Preference number: 4 (lower is better)
Translates to: AFPTFLLVSVLVATCANIMNSTQ*CLAVIL
Trigger: CAGTATTACAGCAAGGCAGCACTGTGTGCTGTTCAT...TATATTAGCACAGGTTGCCACTAATACTGAGACTAGTAAAAATGTAGGAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR CCA 90 bp TTGTCATTGTTCAATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATGCAGCACATTCTTTCTaGATCATTTCTCGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSLFNKKRPRIFMARTRNAAHSF*IISRSS
Trigger: TGAAGAACGAGAAATGATCCAGAAAGAATGTGCTGC...ATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTATTGAACAATGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR CCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGTGTGGAGGACACCATaGTTCTTCTCATTCAATAAA +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSVWRTP*FFSFNK
Trigger: TTTATTGAATGAGAAGAACCATGGTGTCCTCCACAC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CCA 90 bp TGCATACTTTTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCGTCTGCTTTAAATTCTaGCTCACACGAATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: CILFCSKKDSRCTVCFKFVCFKF*LTRIQK
Trigger: TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGAC...GAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAAAAGTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCTATATGCCATCGTTTaGAAGGTGCATACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSLYAIV*KVHTFL
Trigger: CAGAAAAGTATGCACCTTCCAAACGATGGCATATAG...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CCA 90 bp TGTCAAAACACGCATAATTGTGTCTATATGCCATCGTTTGGAAGGTGCATACTTCTATATGCCATCGTTTaGAAGGTGCATACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: CQNTHNCVYMPSFGRCILLYAIV*KVHTFL
Trigger: CAGAAAAGTATGCACCTTCCAAACGATGGCATATAG...AAGTATGCACCTTCCAAACGATGGCATATAGACACAATTATGCGTGTTTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CCA 90 bp AAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACGAATCCAGAAATTAACTGGATTAAATTaGGGACTGCATCATCACGAA +
Preference number: 4 (lower is better)
Translates to: KDSRCTVCFKFWLTRIQKLTGLN*GLHHHE
Trigger: TTCGTGATGATGCAGTCCCCAATTTAATCCAGTTAA...TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CCA 90 bp TCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGTTAACTGGATTAAATTaGGGACTGCATCATCACGAA +
Preference number: 4 (lower is better)
Translates to: SSCLGYYSHLPGQNSIPLLTGLN*GLHHHE
Trigger: TTCGTGATGATGCAGTCCCCAATTTAATCCAGTTAA...CAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGTCTTCCTCTTCACACTaGCCAGATACAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARSSSSH*PDTRRS
Trigger: TGATCTTCTTGTATCTGGCCAGTGTGAAGAGGAAGA...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAATCTTCCTCTTCACACTaGCCAGATACAAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQSSSSH*PDTRRS
Trigger: TGATCTTCTTGTATCTGGCCAGTGTGAAGAGGAAGA...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTAGGGCAGACCTCATGTaGTCATATTTCTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSRADLM*SYFLKS
Trigger: ACTTTTCAAGAAATATGACCACATGAGGTCTGCCCT...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CACTTGTACCAAAGGTTGTTGAGAATAATCACCAAGAATTGCTTTGTACAGGCGAAAATACGAACTAATTaGGGCACAAGCTACCTTTCT +
Preference number: 4 (lower is better)
Translates to: HLYQRLLRIITKNCFVQAKIRTN*GTSYLS
Trigger: AGAAAGGTAGCTTGTGCCCCAATTAGTTCGTATTTT...CGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAACAACCTTTGGTACAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568327.5
3UTR CAA 72 bp GTGTTTACAAATAAACTCGCAAGGTCTGACCAGTTCTaGGTAACAAACATACATGTGTGTGTCTGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: VFTNKLARSDQF*VTNIHVCVCVY
Trigger: ATACACACAGACACACACATGTATGTTTGTTACCAAGAACTGGTCAGACCTTGCGAGTTTATTTGTAAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
3UTR CAA 72 bp AAGATCACCATATTCACCTATACACCATGCAGCCACTaGTACCAAAGGTTGTTGAGAATAATCACCAAGAAT +
Preference number: 4 (lower is better)
Translates to: KITIFTYTPCSH*YQRLLRIITKN
Trigger: ATTCTTGGTGATTATTCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAATATGGTGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
3UTR CAA 72 bp GTCAAAACACGCATAATTGTGTCTATATGCCATCGTTaGGAAGGTGCATACTTTTCTGCAGCAAGAAAGATT +
Preference number: 4 (lower is better)
Translates to: VKTRIIVSICHR*EGAYFSAARKI
Trigger: AATCTTTCTTGCTGCAGAAAAGTATGCACCTTCCAAACGATGGCATATAGACACAATTATGCGTGTTTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR TCA 90 bp GCATTTCCTACATTTTTACTAGTCTCAGTATTAGTGGCAACCTGTGCTAATATATTCTTCTCTAAAAGATaGCCGGATTGCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: AFPTFLLVSVLVATCANIFFSKR*PDCSTF
Trigger: GAATGTGCTGCAATCCGGTCATCTTTTAGAGAAGAA...TATATTAGCACAGGTTGCCACTAATACTGAGACTAGTAAAAATGTAGGAAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450149.6
ENST00000565009.5
ENST00000568327.5
CDS-3UTR TCA 90 bp TCATGTTCTGGTGAATATCCGGACATGATGAGGTTCTTTAAAATACGAACTAATGCAAAAAGGGGTCACTaGTACCAGAAACATCATGTT +
Preference number: 4 (lower is better)
Translates to: SCSGEYPDMMRFFKIRTNAKRGH*YQKHHV
Trigger: AACATGATGTTTCTGGTATCAGTGACCCCTTTTTGC...ATTAGTTCGTATTTTAAAGAACCTCATCATGTCCGGATATTCACCAGAACATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000565009.5
CDS-3UTR TCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTATTCATAGCTTCACTTaGATCATCATCATTTCGTCC +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSIHSFT*IIIISS
Trigger: GGACGAAATGATGATGATTCAAGTGAAGCTATGAAT...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR TCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAATCGCAATCCACTCTCTaGCTTAATATCCATGATAGT +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQSQSTL*LNIHDS
Trigger: ACTATCATGGATATTAAGTCAGAGAGTGGATTGCGA...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR TCA 90 bp TCATGTTCTGGTGAATATCCGGACATGATGAGGTTCTTTAAAATACGAACTAATGGTTTACAGTACAAGTaGATCGAGTGGAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SCSGEYPDMMRFFKIRTNGLQYK*IEWKAS
Trigger: TGAAGCTTTCCACTCGATTCACTTGTACTGTAAACC...ATTAGTTCGTATTTTAAAGAACCTCATCATGTCCGGATATTCACCAGAACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR TCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGATTGCTGAGCCCTTGTaGTTATATGTAAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARIAEPL*LYVSLI
Trigger: GATCAAGCTTACATATAATCACAAGGGCTCAGCAAT...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAATTCCCAGAGTTCCTTTaGTTGAGTGGGATAAAGAAT +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQFPEFL*LSGIKN
Trigger: ATTCTTTATCCCACTCAATCAAAGGAACTCTGGGAA...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR TCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGAATATTCCAGCATCTaGTACAGAGCTAGATTTGAC +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQEYSSI*YRARFD
Trigger: GTCAAATCTAGCTCTGTATCAGATGCTGGAATATTC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299980.9
CDS-3UTR GCA 90 bp TTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTATAATTGTGTCTATATaGCATCGTTTGGAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: FIMPRILFPFTRAKLNSIIIVSI*HRLEGA
Trigger: TGCACCTTCCAAACGATGGCATATAGACACAATTAT...AATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGAATGTCTTTGGTACTaGAGCTTGGAAAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQECLWY*SLENKV
Trigger: GACTTTGTTTTCCAAGCTGCAGTACCAAAGACATTC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCATTTCCATTCCGAATaGCAGATGTTAAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARHFHSE*QMLKVP
Trigger: AGGCACTTTTAACATCTGGCATTCGGAATGGAAATG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGGCACCATATCCTTCATaGCAAATCTCAACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARAPYPS*QISTKA
Trigger: AGCTTTTGTTGAGATTTGGCATGAAGGATATGGTGC...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGCACCATATCCTTCATaGCAAATCTCAACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQAPYPS*QISTKA
Trigger: AGCTTTTGTTGAGATTTGGCATGAAGGATATGGTGC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp ACATCATGTTCTGGTGAATATCCGGACATGATGAGGTTCTTTAAAATACGAACTGTGTGGAGGACACCATaGTTCTTCTCATTCAATAAA +
Preference number: 4 (lower is better)
Translates to: TSCSGEYPDMMRFFKIRTVWRTP*FFSFNK
Trigger: TTTATTGAATGAGAAGAACCATGGTGTCCTCCACAC...AGTTCGTATTTTAAAGAACCTCATCATGTCCGGATATTCACCAGAACATGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR CCA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTTTAACTGGATTAAATTaGGGACTGCATCATCACGAA +
Preference number: 4 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSLTGLN*GLHHHE
Trigger: TTCGTGATGATGCAGTCCCCAATTTAATCCAGTTAA...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAAGGGCAGACCTCATGTaGTCATATTTCTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQRADLM*SYFLKS
Trigger: ACTTTTCAAGAAATATGACCACATGAGGTCTGCCCT...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAATTTGGTACTGCAGCTTaGAAAACAAAGTCCGTCATA +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQFGTAA*KTKSVI
Trigger: TATGACGGACTTTGTTTTCCAAGCTGCAGTACCAAA...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR GCA 90 bp TGTCAAAACACGCATAATTGTGTCTATATGCCATCGTTTGGAAGGTGCATACTTAAGAAAGATTCCAGATaGACAGTCTGCTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: CQNTHNCVYMPSFGRCILKKDSR*TVCFKF
Trigger: GAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTT...AAGTATGCACCTTCCAAACGATGGCATATAGACACAATTATGCGTGTTTTGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGATAATTGTGTCTATATaGCATCGTTTGGAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARIIVSI*HRLEGA
Trigger: TGCACCTTCCAAACGATGGCATATAGACACAATTAT...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR GCA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAAAGAAAGATTCCAGATaGACAGTCTGCTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQKKDSR*TVCFKF
Trigger: GAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTT...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR GCA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGAAGAAAGATTCCAGATaGACAGTCTGCTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: TKALFNSICPVFTNKLARKKDSR*TVCFKF
Trigger: GAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTT...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CCA 90 bp GCATTTCCTACATTTTTACTAGTCTCAGTATTAGTGGCAACCTGTGCTAATATATTAACTGGATTAAATTaGGGACTGCATCATCACGAA +
Preference number: 4 (lower is better)
Translates to: AFPTFLLVSVLVATCANILTGLN*GLHHHE
Trigger: TTCGTGATGATGCAGTCCCCAATTTAATCCAGTTAA...TATATTAGCACAGGTTGCCACTAATACTGAGACTAGTAAAAATGTAGGAAATGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS GCA 90 bp AACGTAGCAAGGATCGGGGCTGTCACTGATGACGCGAGACGCTGCTaGCGAGTCACCGCTGCGATGAGTCTGAGCGAGAAAGATCCGGCC +
Preference number: 5 (lower is better)
Translates to: NVARIGAVTDDARRC*RVTAAMSLSEKDPA
Trigger: GGCCGGATCTTTCTCGCTCAGACTCATCGCAGCGGTGACTCGGCAGCAGCGTCTCGCGTCATCAGTGACAGCCCCGATCCTTGCTACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393512.7
CDS GCA 90 bp AGAACTCGGACCCTGCCGAGGACTATTTGCCAAGGAGGAGGCGACTaGTCCTGGCAGAGCGACGCAAACGTAGCAAGGATCGGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: RTRTLPRTICQGGGD*SWQSDANVARIGAV
Trigger: GACAGCCCCGATCCTTGCTACGTTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGGGTCCGAGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393512.7
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS CCA 90 bp CGGACCCTGCCGAGGACTATTTGCCAAGGAGGAGGCGACTGCTCCTaGCAGAGCGACGCAAACGTAGCAAGGATCGGGGCTGTCACTGAT +
Preference number: 5 (lower is better)
Translates to: RTLPRTICQGGGDCS*QSDANVARIGAVTD
Trigger: ATCAGTGACAGCCCCGATCCTTGCTACGTTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGGGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000566161.5
CDS GCA 90 bp GCAAACGTAGCAAGGATCGGGGCTGTCACTGATGACGCGAGACGCTaGTGCCGAGTCACCGCTGCGATGAGTCTGAGCGAGAAAGATCCG +
Preference number: 5 (lower is better)
Translates to: ANVARIGAVTDDARR*CRVTAAMSLSEKDP
Trigger: CGGATCTTTCTCGCTCAGACTCATCGCAGCGGTGACTCGGCAGCAGCGTCTCGCGTCATCAGTGACAGCCCCGATCCTTGCTACGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393512.7
CDS CCA 90 bp CTCCTGGCCCAGCTTCTCTGTCTTCTCTTCTCAACACCCACAGCCTaGGACTGGACCCCTGAAACTGAAAGGAAGCTTCCGGTCGAGCGC +
Preference number: 5 (lower is better)
Translates to: LLAQLLCLLFSTPTA*DWTPETERKLPVER
Trigger: GCGCTCGACCGGAAGCTTCCTTTCAGTTTCAGGGGTCCAGTCCCAGGCTGTGGGTGTTGAGAAGAGAAGACAGAGAAGCTGGGCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563104.5
ENST00000567583.1
CDS TCA 90 bp CGACTCTTTCAGGCAATCAGGAAGACCGGGAGAATTATTAGACGCTaGCGTCCGCAGGGCCAGGAGCGGCCCGAAACCTCGAATGAAACC +
Preference number: 5 (lower is better)
Translates to: RLFQAIRKTGRIIRR*RPQGQERPETSNET
Trigger: GGTTTCATTCGAGGTTTCGGGCCGCTCCTGGCCCTGCGGACGTCAGCGTCTAATAATTCTCCCGGTCTTCCTGATTGCCTGAAAGAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566161.5
ENST00000570297.5
CDS GCA 90 bp TCTCTACCTCTCCTGCAAGATCTCTGCACATCTCTGAGGAGCCCATaGAGCCGAGGGTACAAAGTGCTAACCCCTGTACGAATTGCGTGC +
Preference number: 5 (lower is better)
Translates to: SLPLLQDLCTSLRSP*SRGYKVLTPVRIAC
Trigger: GCACGCAATTCGTACAGGGGTTAGCACTTTGTACCCTCGGCTGCATGGGCTCCTCAGAGATGTGCAGAGATCTTGCAGGAGAGGTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000450149.6
ENST00000563104.5
ENST00000563259.5
ENST00000565009.5
ENST00000568327.5
ENST00000569748.5
CDS GCA 90 bp TTTCTCTCGAATTATCCAAGAACTCGGACCCTGCCGAGGACTATTTaGCAAGGAGGAGGCGACTGCTCCTGGCAGAGCGACGCAAACGTA +
Preference number: 5 (lower is better)
Translates to: FLSNYPRTRTLPRTI*QGGGDCSWQSDANV
Trigger: TACGTTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTGGATAATTCGAGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393512.7
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS CCA 90 bp CGGATTGCAGCACATTCTTTCTGGATCATTTCTCGTTCTTCAGCTTaGGTTCGGGCTGTCCGGATGGTCCGGATCAGCTCCCGCAATCTG +
Preference number: 5 (lower is better)
Translates to: RIAAHSFWIISRSSA*VRAVRMVRISSRNL
Trigger: CAGATTGCGGGAGCTGATCCGGACCATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGAAATGATCCAGAAAGAATGTGCTGCAATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000450149.6
ENST00000563104.5
ENST00000563259.5
ENST00000565009.5
ENST00000565412.5
ENST00000566161.5
ENST00000567583.1
ENST00000568327.5
ENST00000569185.5
ENST00000569748.5
ENST00000569975.5
ENST00000570297.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGGTGCCAAACCCTCATaGCCAGGACTGAGGGGGAAA +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFGAKPS*PGLRGK
Trigger: TTTCCCCCTCAGTCCTGGCAATGAGGGTTTGGCACC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACCTGCCGAGGACTATTaGCCAAGGAGGAGGCGACTG +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKPAEDY*PRRRRL
Trigger: CAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393512.7
ENST00000569748.5
CDS GCA 90 bp CCTCCTCTCCTGGTCGTTTCCGTGTCCTCGTACTGCAACTTATCGTaGCTTTTCTCTCGAATTATCCAAGAACTCGGACCCTGCCGAGGA +
Preference number: 5 (lower is better)
Translates to: PPLLVVSVSSYCNLS*LFSRIIQELGPCRG
Trigger: TCCTCGGCAGGGTCCGAGTTCTTGGATAATTCGAGAGAAAAGGCACGATAAGTTGCAGTACGAGGACACGGAAACGACCAGGAGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393512.7
ENST00000565161.1
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS CCA 90 bp GGACTGGACCCTATTGAGGAAACTTCGCTCCCTGTCCTCCTCTCCTaGTCGTTTCCGTGTCCTCGTACTGCAACTTATCGTGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: GLDPIEETSLPVLLS*SFPCPRTATYRAFS
Trigger: AGAAAAGGCACGATAAGTTGCAGTACGAGGACACGGAAACGACCAGGAGAGGAGGACAGGGAGCGAAGTTTCCTCAATAGGGTCCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565161.1
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAGGTGCCAAACCCTCATaGCCAGGACTGAGGGGGAAA +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKGAKPS*PGLRGK
Trigger: TTTCCCCCTCAGTCCTGGCAATGAGGGTTTGGCACC...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS GCA 90 bp AACTTATCGTGCCTTTTCTCTCGAATTATCCAAGAACTCGGACCCTaGCGAGGACTATTTGCCAAGGAGGAGGCGACTGCTCCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: NLSCLFSRIIQELGP*RGLFAKEEATAPGR
Trigger: TCTGCCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTGGATAATTCGAGAGAAAAGGCACGATAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393512.7
ENST00000565161.1
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATTCTCGTTCTTCAGCTaGGGTTCGGGCTGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKFSFFS*GSGCPD
Trigger: ATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGAA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS GCA 90 bp TTCGCTCCCTGTCCTCCTCTCCTGGTCGTTTCCGTGTCCTCGTACTaGAACTTATCGTGCCTTTTCTCTCGAATTATCCAAGAACTCGGA +
Preference number: 5 (lower is better)
Translates to: FAPCPPLLVVSVSSY*NLSCLFSRIIQELG
Trigger: TCCGAGTTCTTGGATAATTCGAGAGAAAAGGCACGATAAGTTGCAGTACGAGGACACGGAAACGACCAGGAGAGGAGGACAGGGAGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393512.7
ENST00000565161.1
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCCAGCAGAAGATGGTTaGCTTGTAGGCGCAGTTGGA +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPPAEDG*LVGAVG
Trigger: TCCAACTGCGCCTACAAGCAAACCATCTTCTGCTGG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGGAGCACCTGTAAGGTaGATGTCTCCCAGCAAATCA +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFGAPVR*MSPSKS
Trigger: TGATTTGCTGGGAGACATCAACCTTACAGGTGCTCC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCGGGGCCCAGGGAATGTaGATTCTGGCTGTAAATGTG +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPGAQGM*ILAVNV
Trigger: CACATTTACAGCCAGAATCAACATTCCCTGGGCCCC...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAGAAGGGGCAACTCTTaGCTGCAGAGACAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFRRGNS*LQRQSE
Trigger: CTCACTTTGTCTCTGCAGCAAAGAGTTGCCCCTTCT...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS CCA 90 bp ACTTCACACACTATTGAGGAAACTTCGCTCCCTGTCCTCCTCTCCTaGTCGTTTCCGTGTCCTCGTACTGCAACTTATCGTGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: TSHTIEETSLPVLLS*SFPCPRTATYRAFS
Trigger: AGAAAAGGCACGATAAGTTGCAGTACGAGGACACGGAAACGACCAGGAGAGGAGGACAGGGAGCGAAGTTTCCTCAATAGTGTGTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393512.7
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTTCTCGTTCTTCAGCTaGGGTTCGGGCTGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKFSFFS*GSGCPD
Trigger: ATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGAA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCATCTAACAGCAGCATaGCCCCTAAATAGCCAATGC +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFHLTAA*PLNSQC
Trigger: GCATTGGCTATTTAGGGGCAATGCTGCTGTTAGATG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAAATCCAATAAATCATaGGCCTGGCTGGTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFKSNKS*AWLVGC
Trigger: ACAGCCCACCAGCCAGGCCAATGATTTATTGGATTT...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATCTAGCTCTGTGCTGTaGGAGGCCTGTATCGTTATC +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKSSSVL*EACIVI
Trigger: GATAACGATACAGGCCTCCAACAGCACAGAGCTAGA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCTCTAGCTCTGTGCTGTaGGAGGCCTGTATCGTTATC +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPSSSVL*EACIVI
Trigger: GATAACGATACAGGCCTCCAACAGCACAGAGCTAGA...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGGGGCCCAGGGAATGTaGATTCTGGCTGTAAATGTG +
Preference number: 5 (lower is better)
Translates to: LQKQPASTVEERTLVFNNGAQGM*ILAVNV
Trigger: CACATTTACAGCCAGAATCAACATTCCCTGGGCCCC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp GTACTGCAGCTTGGAAAACAAAGTCCGTCATATCTAGCTCTGTGCTGTTGGAGGGATGTGCTGACGTCCTaGCACGATCTTGTGATCCCA +
Preference number: 5 (lower is better)
Translates to: VLQLGKQSPSYLALCCWRDVLTS*HDLVIP
Trigger: TGGGATCACAAGATCGTGCAAGGACGTCAGCACATC...CCTCCAACAGCACAGAGCTAGATATGACGGACTTTGTTTTCCAAGCTGCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS TCA 90 bp CACAACCTCCTTCCCAGAGTTCCTTTGATTGAGTGGGATAAAGAATaGGAATGGTGCCAAACCCTCATTGCCAGGACTGAGGGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: HNLLPRVPLIEWDKE*EWCQTLIARTEGES
Trigger: ACTTTCCCCCTCAGTCCTGGCAATGAGGGTTTGGCACCATTCTCATTCTTTATCCCACTCAATCAAAGGAACTCTGGGAAGGAGGTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
ENST00000570052.1
CDS GCA 90 bp AGGGTTCAGAACTTTAATGACTTGTGTGATGGTCCCCGTGTTAAATaGTGGGACAATGCTGCTGCTAGGAGACAAGAGCTGCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: RVQNFNDLCDGPRVK*WDNAAARRQELQLE
Trigger: TTCCAGCTGCAGCTCTTGTCTCCTAGCAGCAGCATTGTCCCAGCATTTAACACGGGGACCATCACACAAGTCATTAAAGTTCTGAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS CCA 90 bp ACTAATTGGGGCACAAGCTACCTTTCTGAAATGCGCAAGCATGTCTaGGCTTCGCTCACACATTTCTGTGAGGAGGACTACAGATGTGTG +
Preference number: 5 (lower is better)
Translates to: TNWGTSYLSEMRKHV*ASLTHFCEEDYRCV
Trigger: CACACATCTGTAGTCCTCCTCACAGAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCATTTCAGAAAGGTAGCTTGTGCCCCAATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565642.5
ENST00000568327.5
CDS-3UTR CAA 90 bp GACATCCAAATCTTTAAGACAGTCCACAATTGTGCTTCTGTGCCTCTGTACTGCTTCTCGTTCTTCAGCTaGGGTTCGGGCTGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: DIQIFKTVHNCASVPLYCFSFFS*GSGCPD
Trigger: ATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGAA...GCAGTACAGAGGCACAGAAGCACAATTGTGGACTGTCTTAAAGATTTGGATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACATCTAACAGCAGCATaGCCCCTAAATAGCCAATGC +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKHLTAA*PLNSQC
Trigger: GCATTGGCTATTTAGGGGCAATGCTGCTGTTAGATG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATCACCAAGAATTGCTTaGTACAGGCGCTGGACAGTA +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKSPRIA*YRRWTV
Trigger: TACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCTCACCAAGAATTGCTTaGTACAGGCGCTGGACAGTA +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPSPRIA*YRRWTV
Trigger: TACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGA...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCACACCATGCAGCCACTaGTACCAAAGGTTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPTPCSH*YQRLLR
Trigger: TCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCAAATCCAATAAATCATaGGCCTGGCTGGTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPKSNKS*AWLVGC
Trigger: ACAGCCCACCAGCCAGGCCAATGATTTATTGGATTT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGCCAGCAGAAGATGGTTaGCTTGTAGGCGCAGTTGGA +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKPAEDG*LVGAVG
Trigger: TCCAACTGCGCCTACAAGCAAACCATCTTCTGCTGG...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATGGAGCACCTGTAAGGTaGATGTCTCCCAGCAAATCA +
Preference number: 5 (lower is better)
Translates to: LQKQPASTVEERTLVFNNGAPVR*MSPSKS
Trigger: TGATTTGCTGGGAGACATCAACCTTACAGGTGCTCC...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCCTGCAGCAATATCATaGAAGAGAGGCTGTGATGAA +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFPAAIS*KRGCDE
Trigger: TTCATCACAGCCTCTCTTCAATGATATTGCTGCAGG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTACTGTTACACTGGGGTaGGTATTTGACCGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFTVTLG*VFDRSK
Trigger: CTTTGAACGGTCAAATACCAACCCCAGTGTAACAGT...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCTTTGGTACTGCAGCTaGGAAAACAAAGTCCGTCAT +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFLWYCS*ENKVRH
Trigger: ATGACGGACTTTGTTTTCCAAGCTGCAGTACCAAAG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCGCAGCTGGAATGTCTTaGGTACTGCAGCTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPAAGMS*VLQLGK
Trigger: TTTTCCAAGCTGCAGTACCAAAGACATTCCAGCTGC...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCAGAACTTTAATGACTaGTGTGATGGTCCCCGTGTT +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFQNFND*CDGPRV
Trigger: AACACGGGGACCATCACACAAGTCATTAAAGTTCTG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCAATAAATACCCCACCTaGCCCAGTCCACAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPNKYPT*PSPQRN
Trigger: GTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS CCA 90 bp GTTCAGAACTTTAATGACTTGTGTGATGGTCCCCGTGTTAAATGCTaGGACAATGCTGCTGCTAGGAGACAAGAGCTGCAGCTGGAATGT +
Preference number: 5 (lower is better)
Translates to: VQNFNDLCDGPRVKC*DNAAARRQELQLEC
Trigger: ACATTCCAGCTGCAGCTCTTGTCTCCTAGCAGCAGCATTGTCCCAGCATTTAACACGGGGACCATCACACAAGTCATTAAAGTTCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS CCA 90 bp TTGGGGCACAAGCTTTTCATTCTTTCTGAAATGCGCAAGCATGTCTaGGCTTCGCTCACACATTTCTGTGAGGAGGACTACAGATGTGTG +
Preference number: 5 (lower is better)
Translates to: LGHKLFILSEMRKHV*ASLTHFCEEDYRCV
Trigger: CACACATCTGTAGTCCTCCTCACAGAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCATTTCAGAAAGAATGAAAAGCTTGTGCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393512.7
CDS-3UTR CAA 90 bp CACCATATTCACCTATACACCATGCAGCCACTTGTACCAAAGGTTGTTGAGAATTTCTCGTTCTTCAGCTaGGGTTCGGGCTGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: HHIHLYTMQPLVPKVVENFSFFS*GSGCPD
Trigger: ATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGAA...ATTCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAATATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTGCATATACAGTAATTTaGCCACATTCCGACATCGGT +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFAYTVI*PHSDIG
Trigger: ACCGATGTCGGAATGTGGCAAAATTACTGTATATGC...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTCACCAAGAATTGCTTaGTACAGGCGCTGGACAGTA +
Preference number: 5 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSPRIA*YRRWTV
Trigger: TACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAATAATCACCAAGAATaGCTTTGTACAGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFNNHQE*LCTGAG
Trigger: TCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATT...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATAAATCCAATAAATCATaGGCCTGGCTGGTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LQKQPASTVEERTLVFNNKSNKS*AWLVGC
Trigger: ACAGCCCACCAGCCAGGCCAATGATTTATTGGATTT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp GCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACGAATCCCCAGCAGAAGATGGTTaGCTTGTAGGCGCAGTTGGA +
Preference number: 5 (lower is better)
Translates to: ARKIPDAQSALNSGSHESPAEDG*LVGAVG
Trigger: TCCAACTGCGCCTACAAGCAAACCATCTTCTGCTGG...GGATTCGTGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGGAGCACCTGTAAGGTaGATGTCTCCCAGCAAATCA +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKGAPVR*MSPSKS
Trigger: TGATTTGCTGGGAGACATCAACCTTACAGGTGCTCC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCCTGCAGCAATATCATaGAAGAGAGGCTGTGATGAA +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPPAAIS*KRGCDE
Trigger: TTCATCACAGCCTCTCTTCAATGATATTGCTGCAGG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACCTGCAGCAATATCATaGAAGAGAGGCTGTGATGAA +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKPAAIS*KRGCDE
Trigger: TTCATCACAGCCTCTCTTCAATGATATTGCTGCAGG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTCTAGCTCTGTGCTGTaGGAGGCCTGTATCGTTATC +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKSSSVL*EACIVI
Trigger: GATAACGATACAGGCCTCCAACAGCACAGAGCTAGA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACTTTGGTACTGCAGCTaGGAAAACAAAGTCCGTCAT +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKLWYCS*ENKVRH
Trigger: ATGACGGACTTTGTTTTCCAAGCTGCAGTACCAAAG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCAGAACTTTAATGACTaGTGTGATGGTCCCCGTGTT +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPQNFND*CDGPRV
Trigger: AACACGGGGACCATCACACAAGTCATTAAAGTTCTG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACTGCTAGATCTTGCATaGCTGAGCCCTTGTGATTAT +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKLLDLA*LSPCDY
Trigger: ATAATCACAAGGGCTCAGCAATGCAAGATCTAGCAG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATAATAAATACCCCACCTaGCCCAGTCCACAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: LQKQPASTVEERTLVFNNNKYPT*PSPQRN
Trigger: GTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTTGCCTCTTTCAAACATaGGGGGAACCAGTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFCLFQT*GEPVEK
Trigger: TTTTTCTACTGGTTCCCCCAATGTTTGAAAGAGGCA...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAGGTCTGACCAGTTCTaGGTAACAAACATACATGTG +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFRSDQF*VTNIHV
Trigger: CACATGTATGTTTGTTACCAAGAACTGGTCAGACCT...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS CCA 90 bp TTGTCTTCTTCTCTAAAAGATGACCGGATTGCAGCACATTCTTTCTaGATCATTTCTCGTTCTTCAGCTTGGGTTCGGGCTGTCCGGATG +
Preference number: 5 (lower is better)
Translates to: LSSSLKDDRIAAHSF*IISRSSAWVRAVRM
Trigger: CATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGAAATGATCCAGAAAGAATGTGCTGCAATCCGGTCATCTTTTAGAGAAGAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000450149.6
ENST00000563104.5
ENST00000563259.5
ENST00000565009.5
ENST00000565412.5
ENST00000566161.5
ENST00000567583.1
ENST00000568327.5
ENST00000569185.5
ENST00000569748.5
ENST00000569975.5
ENST00000570297.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCGCATATACAGTAATTTaGCCACATTCCGACATCGGT +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPAYTVI*PHSDIG
Trigger: ACCGATGTCGGAATGTGGCAAAATTACTGTATATGC...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCAAAACTCAATTCCATaGCACGCCGTTTTATTGAGA +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFQNSIP*HAVLLR
Trigger: TCTCAATAAAACGGCGTGCAATGGAATTGAGTTTTG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp GCACTCTGTGAACACCAAGTACTGCCAGATGTGCTGACGTCCTTGCACGATCTTATTAACTGGATTAAATaGGGGACTGCATCATCACGA +
Preference number: 5 (lower is better)
Translates to: ALCEHQVLPDVLTSLHDLINWIK*GTASSR
Trigger: TCGTGATGATGCAGTCCCCAATTTAATCCAGTTAAT...AAGATCGTGCAAGGACGTCAGCACATCTGGCAGTACTTGGTGTTCACAGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCAATAATCACCAAGAATaGCTTTGTACAGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPNNHQE*LCTGAG
Trigger: TCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATT...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AGTAGCCTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTCACTTGTACCAAAGGTaGTTGAGAATAATCACCAAG +
Preference number: 5 (lower is better)
Translates to: SSLQKQPASTVEERTLVFHLYQR*LRIITK
Trigger: CTTGGTGATTATTCTCAACAACCTTTGGTACAAGTG...AAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAGGCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATACTGTTACACTGGGGTaGGTATTTGACCGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: LQKQPASTVEERTLVFNNTVTLG*VFDRSK
Trigger: CTTTGAACGGTCAAATACCAACCCCAGTGTAACAGT...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp ACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATCTCCACACTACTGTTACACTGGGGTaGGTATTTGACCGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: TKNCFVQALDSIGMHLHTTVTLG*VFDRSK
Trigger: CTTTGAACGGTCAAATACCAACCCCAGTGTAACAGT...AGTGTGGAGATGCATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGGCAGCTGGAATGTCTTaGGTACTGCAGCTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKAAGMS*VLQLGK
Trigger: TTTTCCAAGCTGCAGTACCAAAGACATTCCAGCTGC...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCCTTCCCAGAGTTCCTTaGATTGAGTGGGATAAAGAA +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPLPRVP*IEWDKE
Trigger: TTCTTTATCCCACTCAATCAAAGGAACTCTGGGAAG...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATGCCTCTTTCAAACATaGGGGGAACCAGTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKCLFQT*GEPVEK
Trigger: TTTTTCTACTGGTTCCCCCAATGTTTGAAAGAGGCA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCCTGCCGAGGACTATTaGCCAAGGAGGAGGCGACTG +
Preference number: 5 (lower is better)
Translates to: TKALFNSICPVFTNKLARPAEDY*PRRRRL
Trigger: CAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAATCATTCTTGATACAGTaGGTCATGAGAAGATGGACA +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKSFLIQ*VMRRWT
Trigger: TGTCCATCTTCTCATGACCAACTGTATCAAGAATGA...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCTCATTCTTGATACAGTaGGTCATGAGAAGATGGACA +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPSFLIQ*VMRRWT
Trigger: TGTCCATCTTCTCATGACCAACTGTATCAAGAATGA...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACAAAACTCAATTCCATaGCACGCCGTTTTATTGAGA +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKQNSIP*HAVLLR
Trigger: TCTCAATAAAACGGCGTGCAATGGAATTGAGTTTTG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AAGTGCCTGAAGATGGTAACCCAGCTAGTGAGGAATAAATACCCCACCTTGCCCTCTATATGCCATCGTTaGGAAGGTGCATACTTTTCT +
Preference number: 5 (lower is better)
Translates to: KCLKMVTQLVRNKYPTLPSICHR*EGAYFS
Trigger: AGAAAAGTATGCACCTTCCAAACGATGGCATATAGA...GGGCAAGGTGGGGTATTTATTCCTCACTAGCTGGGTTACCATCTTCAGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAAATTAACTGGATTAAATaGGGGACTGCATCATCACGA +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKINWIK*GTASSR
Trigger: TCGTGATGATGCAGTCCCCAATTTAATCCAGTTAAT...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp CATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGTCACCAAGAATTGCTTaGTACAGGCGCTGGACAGTA +
Preference number: 5 (lower is better)
Translates to: HASDIIPIYQGKTQFHCTSPRIA*YRRWTV
Trigger: TACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGA...CGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CAA 90 bp CAAGAAGATCACCATATTCACCTATACACCATGCAGCCACTTGTACCAAAGGTTGGAGCACCTGTAAGGTaGATGTCTCCCAGCAAATCA +
Preference number: 5 (lower is better)
Translates to: QEDHHIHLYTMQPLVPKVGAPVR*MSPSKS
Trigger: TGATTTGCTGGGAGACATCAACCTTACAGGTGCTCC...AACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAATATGGTGATCTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGCCTGCAGCAATATCATaGAAGAGAGGCTGTGATGAA +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKPAAIS*KRGCDE
Trigger: TTCATCACAGCCTCTCTTCAATGATATTGCTGCAGG...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGCAGAACTTTAATGACTaGTGTGATGGTCCCCGTGTT +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKQNFND*CDGPRV
Trigger: AACACGGGGACCATCACACAAGTCATTAAAGTTCTG...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGCTGCTAGATCTTGCATaGCTGAGCCCTTGTGATTAT +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKLLDLA*LSPCDY
Trigger: ATAATCACAAGGGCTCAGCAATGCAAGATCTAGCAG...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGGTGCCAAACCCTCATaGCCAGGACTGAGGGGGAAA +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQGAKPS*PGLRGK
Trigger: TTTCCCCCTCAGTCCTGGCAATGAGGGTTTGGCACC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATCTTCCCAGAGTTCCTTaGATTGAGTGGGATAAAGAA +
Preference number: 5 (lower is better)
Translates to: LQKQPASTVEERTLVFNNLPRVP*IEWDKE
Trigger: TTCTTTATCCCACTCAATCAAAGGAACTCTGGGAAG...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AGACCAGCTGCTTATTTCCTCAGGGGCCCAGGGAATGTTGATTCTGGCTGTAAACGACATCGGTATGTATaGTCTTCTTCTCTAAAAGAT +
Preference number: 5 (lower is better)
Translates to: RPAAYFLRGPGNVDSGCKRHRYV*SSSLKD
Trigger: ATCTTTTAGAGAAGAAGACAATACATACCGATGTCG...TTTACAGCCAGAATCAACATTCCCTGGGCCCCTGAGGAAATAAGCAGCTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp AACTTTCCTGATGACATGAACAGCACACAGTGCTGCCTTGCTGTAATACTGTTTCATCTAACAGCAGCATaGCCCCTAAATAGCCAATGC +
Preference number: 5 (lower is better)
Translates to: NFPDDMNSTQCCLAVILFHLTAA*PLNSQC
Trigger: GCATTGGCTATTTAGGGGCAATGCTGCTGTTAGATG...AAACAGTATTACAGCAAGGCAGCACTGTGTGCTGTTCATGTCATCAGGAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR CAA 90 bp TTGAGAATAATCACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGCATCTAACAGCAGCATaGCCCCTAAATAGCCAATGC +
Preference number: 5 (lower is better)
Translates to: LRIITKNCFVQALDSIGMHLTAA*PLNSQC
Trigger: GCATTGGCTATTTAGGGGCAATGCTGCTGTTAGATG...CATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR CAA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTCATTCTTGATACAGTaGGTCATGAGAAGATGGACA +
Preference number: 5 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSFLIQ*VMRRWT
Trigger: TGTCCATCTTCTCATGACCAACTGTATCAAGAATGA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATTCTATATGCCATCGTTaGGAAGGTGCATACTTTTCT +
Preference number: 5 (lower is better)
Translates to: LQKQPASTVEERTLVFNNSICHR*EGAYFS
Trigger: AGAAAAGTATGCACCTTCCAAACGATGGCATATAGA...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp TATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGCCTTGCAGAAGTCACCAAGAATTGCTTaGTACAGGCGCTGGACAGTA +
Preference number: 5 (lower is better)
Translates to: YYSHLPGQNSIPLHALQKSPRIA*YRRWTV
Trigger: TACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGA...CTTCTGCAAGGCGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCCAGCAGAAGATGGTTaGCTTGTAGGCGCAGTTGGA +
Preference number: 5 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSPAEDG*LVGAVG
Trigger: TCCAACTGCGCCTACAAGCAAACCATCTTCTGCTGG...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp AAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACGAATCCAGAAATCTAGCTCTGTGCTGTaGGAGGCCTGTATCGTTATC +
Preference number: 5 (lower is better)
Translates to: KDSRCTVCFKFWLTRIQKSSSVL*EACIVI
Trigger: GATAACGATACAGGCCTCCAACAGCACAGAGCTAGA...TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTGGGGCCCAGGGAATGTaGATTCTGGCTGTAAATGTG +
Preference number: 5 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSGAQGM*ILAVNV
Trigger: CACATTTACAGCCAGAATCAACATTCCCTGGGCCCC...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGTGCCTCTTTCAAACATaGGGGGAACCAGTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKCLFQT*GEPVEK
Trigger: TTTTTCTACTGGTTCCCCCAATGTTTGAAAGAGGCA...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGAGGTCTGACCAGTTCTaGGTAACAAACATACATGTG +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKRSDQF*VTNIHV
Trigger: CACATGTATGTTTGTTACCAAGAACTGGTCAGACCT...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGACTACAAGAACTACGTaGGCCTTAAATATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKTTRTT*ALNMLG
Trigger: CCCAAGCATATTTAAGGCCAACGTAGTTCTTGTAGT...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564155.5
CDS-3UTR CAA 90 bp TCATGTTCTGGTGAATATCCGGACATGATGAGGTTCTTTAAAATACGAACTAATTTCTCGTTCTTCAGCTaGGGTTCGGGCTGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: SCSGEYPDMMRFFKIRTNFSFFS*GSGCPD
Trigger: ATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGAA...ATTAGTTCGTATTTTAAAGAACCTCATCATGTCCGGATATTCACCAGAACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000565009.5
CDS-3UTR CAA 90 bp CTCCAGAAGCAGCCAGCCTCAACAGTGGAGGAGAGGACATTAGTCTTTAACAATCGACATCGGTATGTATaGTCTTCTTCTCTAAAAGAT +
Preference number: 5 (lower is better)
Translates to: LQKQPASTVEERTLVFNNRHRYV*SSSLKD
Trigger: ATCTTTTAGAGAAGAAGACAATACATACCGATGTCG...ATTGTTAAAGACTAATGTCCTCTCCTCCACTGTTGAGGCTGGCTGCTTCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp ATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATCCACTCTCTGACTGCATATACAGTAATTTaGCCACATTCCGACATCGGT +
Preference number: 5 (lower is better)
Translates to: IRNDPGYLWLGLAIHSLTAYTVI*PHSDIG
Trigger: ACCGATGTCGGAATGTGGCAAAATTACTGTATATGC...AGTCAGAGAGTGGATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR CAA 90 bp CTGGGGTTGGTATTTGACCGTTCAAAGGTGAATTCTATCTTCAAGCCATTCTTACATCTAACAGCAGCATaGCCCCTAAATAGCCAATGC +
Preference number: 5 (lower is better)
Translates to: LGLVFDRSKVNSIFKPFLHLTAA*PLNSQC
Trigger: GCATTGGCTATTTAGGGGCAATGCTGCTGTTAGATG...TAAGAATGGCTTGAAGATAGAATTCACCTTTGAACGGTCAAATACCAACCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp GTGAGGAATAAATACCCCACCTTGCCCAGTCCACAGAGAAACAACAGTAGAAAGCAAAACTCAATTCCATaGCACGCCGTTTTATTGAGA +
Preference number: 5 (lower is better)
Translates to: VRNKYPTLPSPQRNNSRKQNSIP*HAVLLR
Trigger: TCTCAATAAAACGGCGTGCAATGGAATTGAGTTTTG...CTTTCTACTGTTGTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATTCCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000569748.5
CDS-3UTR CAA 90 bp GACATCCAAATCTTTAAGACAGTCCACAATTGTGCTTCTGTGCCTCTGTACTGCAATAATCACCAAGAATaGCTTTGTACAGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: DIQIFKTVHNCASVPLYCNNHQE*LCTGAG
Trigger: TCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATT...GCAGTACAGAGGCACAGAAGCACAATTGTGGACTGTCTTAAAGATTTGGATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAACCAGCAGAAGATGGTTaGCTTGTAGGCGCAGTTGGA +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQPAEDG*LVGAVG
Trigger: TCCAACTGCGCCTACAAGCAAACCATCTTCTGCTGG...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTAGAAGGGGCAACTCTTaGCTGCAGAGACAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSRRGNS*LQRQSE
Trigger: CTCACTTTGTCTCTGCAGCAAAGAGTTGCCCCTTCT...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp TTAAATTGGGGACTGCATCATCACGAACATAACTTCCTGCACTTCCAAAAGTTCCAAAACTCAATTCCATaGCACGCCTTGCAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: LNWGLHHHEHNFLHFQKFQNSIP*HALQKG
Trigger: TCCCTTCTGCAAGGCGTGCAATGGAATTGAGTTTTG...GAACTTTTGGAAGTGCAGGAAGTTATGTTCGTGATGATGCAGTCCCCAATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp TTGAGAATAATCACCAAGAATTGCTTTGTACAGGCGCTGGACAGTATAGGCATGGCATATACAGTAATTTaGCCACATTCCGACATCGGT +
Preference number: 5 (lower is better)
Translates to: LRIITKNCFVQALDSIGMAYTVI*PHSDIG
Trigger: ACCGATGTCGGAATGTGGCAAAATTACTGTATATGC...CATGCCTATACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR CAA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCATCTAACAGCAGCATaGCCCCTAAATAGCCAATGC +
Preference number: 5 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSHLTAA*PLNSQC
Trigger: GCATTGGCTATTTAGGGGCAATGCTGCTGTTAGATG...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CAA 90 bp GCAAGAAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACGAATCCATTAACTGGATTAAATaGGGGACTGCATCATCACGA +
Preference number: 5 (lower is better)
Translates to: ARKIPDAQSALNSGSHESINWIK*GTASSR
Trigger: TCGTGATGATGCAGTCCCCAATTTAATCCAGTTAAT...GGATTCGTGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CAA 90 bp ACATCCAAATCTTTAAGACAGTCCACAATTGTGCTTCTGTGCCTCTGTACTGCAAATAATCACCAAGAATaGCTTTGTACAGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: TSKSLRQSTIVLLCLCTANNHQE*LCTGAG
Trigger: TCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATT...TGCAGTACAGAGGCACAGAAGCACAATTGTGGACTGTCTTAAAGATTTGGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CAA 90 bp CGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGCCTTGCACACTTGTACCAAAGGTaGTTGAGAATAATCACCAAG +
Preference number: 5 (lower is better)
Translates to: RILFPFTRAKLNSIARLAHLYQR*LRIITK
Trigger: CTTGGTGATTATTCTCAACAACCTTTGGTACAAGTG...TGCAAGGCGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTACACCATGCAGCCACTaGTACCAAAGGTTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSTPCSH*YQRLLR
Trigger: TCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGT...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CAA 90 bp CTTAATTCGGTTTACAGTACAAGTGAATCGAGTGGAAAGCTTCATAATGGCAGTAAATCCAATAAATCATaGGCCTGGCTGGTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LNSVYSTSESSGKLHNGSKSNKS*AWLVGC
Trigger: ACAGCCCACCAGCCAGGCCAATGATTTATTGGATTT...ACTGCCATTATGAAGCTTTCCACTCGATTCACTTGTACTGTAAACCGAATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAATCTAGCTCTGTGCTGTaGGAGGCCTGTATCGTTATC +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQSSSVL*EACIVI
Trigger: GATAACGATACAGGCCTCCAACAGCACAGAGCTAGA...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp CTGGGGTTGGTATTTGACCGTTCAAAGGTGAATTCTATCTTCAAGCCATTCTTACTTTGGTACTGCAGCTaGGAAAACAAAGTCCGTCAT +
Preference number: 5 (lower is better)
Translates to: LGLVFDRSKVNSIFKPFLLWYCS*ENKVRH
Trigger: ATGACGGACTTTGTTTTCCAAGCTGCAGTACCAAAG...TAAGAATGGCTTGAAGATAGAATTCACCTTTGAACGGTCAAATACCAACCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTAATAAATACCCCACCTaGCCCAGTCCACAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSNKYPT*PSPQRN
Trigger: GTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATT...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp ACATCCAAATCTTTAAGACAGTCCACAATTGTGCTTCTGTGCCTCTGTACTGCATCTATATGCCATCGTTaGGAAGGTGCATACTTTTCT +
Preference number: 5 (lower is better)
Translates to: TSKSLRQSTIVLLCLCTASICHR*EGAYFS
Trigger: AGAAAAGTATGCACCTTCCAAACGATGGCATATAGA...TGCAGTACAGAGGCACAGAAGCACAATTGTGGACTGTCTTAAAGATTTGGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CAA 90 bp ATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGCACGCCGTTTTATTTCACCAAGAATTGCTTaGTACAGGCGCTGGACAGTA +
Preference number: 5 (lower is better)
Translates to: ILFPFTRAKLNSIARRFISPRIA*YRRWTV
Trigger: TACTGTCCAGCGCCTGTACAAAGCAATTCTTGGTGA...AATAAAACGGCGTGCAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CAA 90 bp ATCTCCACACTATTAGTTATTAACTGGATTAAATTGGGGACTGCATCATCACGAACACCATGCAGCCACTaGTACCAAAGGTTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: ISTLLVINWIKLGTASSRTPCSH*YQRLLR
Trigger: TCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGT...TCGTGATGATGCAGTCCCCAATTTAATCCAGTTAATAACTAATAGTGTGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAACACCATGCAGCCACTaGTACCAAAGGTTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQTPCSH*YQRLLR
Trigger: TCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGT...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CAA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGGCAGCTGGAATGTCTTaGGTACTGCAGCTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: TKALFNSICPVFTNKLARAAGMS*VLQLGK
Trigger: TTTTCCAAGCTGCAGTACCAAAGACATTCCAGCTGC...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGCAGCTGGAATGTCTTaGGTACTGCAGCTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQAAGMS*VLQLGK
Trigger: TTTTCCAAGCTGCAGTACCAAAGACATTCCAGCTGC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAAATAAATACCCCACCTaGCCCAGTCCACAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQNKYPT*PSPQRN
Trigger: GTTTCTCTGTGGACTGGGCAAGGTGGGGTATTTATT...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp CGTACCTGCAAAAAGGGGTCACTGATACCAGAAACATCATGTTCTGGTGAATATCGACATCGGTATGTATaGTCTTCTTCTCTAAAAGAT +
Preference number: 5 (lower is better)
Translates to: RTCKKGSLIPETSCSGEYRHRYV*SSSLKD
Trigger: ATCTTTTAGAGAAGAAGACAATACATACCGATGTCG...ATATTCACCAGAACATGATGTTTCTGGTATCAGTGACCCCTTTTTGCAGGTACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000565009.5
CDS-3UTR CAA 90 bp GCTAGGACTCGCAATCCACTCTCTGACTTAATATCCATGATAGTCAAAACCGTTCGACATCGGTATGTATaGTCTTCTTCTCTAAAAGAT +
Preference number: 5 (lower is better)
Translates to: ARTRNPLSDLISMIVKTVRHRYV*SSSLKD
Trigger: ATCTTTTAGAGAAGAAGACAATACATACCGATGTCG...AACGGTTTTGACTATCATGGATATTAAGTCAGAGAGTGGATTGCGAGTCCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR CAA 90 bp TATCCGGACATGATGAGGTTCTTTAAAATACGAACTAATTGGGGCACAAGCTTTGCATATACAGTAATTTaGCCACATTCCGACATCGGT +
Preference number: 5 (lower is better)
Translates to: YPDMMRFFKIRTNWGTSFAYTVI*PHSDIG
Trigger: ACCGATGTCGGAATGTGGCAAAATTACTGTATATGC...AAAGCTTGTGCCCCAATTAGTTCGTATTTTAAAGAACCTCATCATGTCCGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450149.6
CDS-3UTR CAA 90 bp AAAGATTCCAGATGCACAGTCTGCTTTAAATTCTGGCTCACACGAATCCAGAAACAAAACTCAATTCCATaGCACGCCGTTTTATTGAGA +
Preference number: 5 (lower is better)
Translates to: KDSRCTVCFKFWLTRIQKQNSIP*HAVLLR
Trigger: TCTCAATAAAACGGCGTGCAATGGAATTGAGTTTTG...TTTCTGGATTCGTGTGAGCCAGAATTTAAAGCAGACTGTGCATCTGGAATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CAA 90 bp TCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTGATTAACTGGATTAAATaGGGGACTGCATCATCACGA +
Preference number: 5 (lower is better)
Translates to: SSCLGYYSHLPGQNSIPLINWIK*GTASSR
Trigger: TCGTGATGATGCAGTCCCCAATTTAATCCAGTTAAT...CAATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000565009.5
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CAA 90 bp ATTAAATCTTACTTTTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTAACACCATGCAGCCACTaGTACCAAAGGTTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: IKSYFSAARKIPDAQSALTPCSH*YQRLLR
Trigger: TCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGT...TAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAAAAGTAAGATTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp ATCTCCACACTATTAGTTATTAACTGGATTAAATTGGGGACTGCATCATCACGACCTGCAGCAATATCATaGAAGAGAGGCTGTGATGAA +
Preference number: 5 (lower is better)
Translates to: ISTLLVINWIKLGTASSRPAAIS*KRGCDE
Trigger: TTCATCACAGCCTCTCTTCAATGATATTGCTGCAGG...TCGTGATGATGCAGTCCCCAATTTAATCCAGTTAATAACTAATAGTGTGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAACTTTGGTACTGCAGCTaGGAAAACAAAGTCCGTCAT +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQLWYCS*ENKVRH
Trigger: ATGACGGACTTTGTTTTCCAAGCTGCAGTACCAAAG...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCTGCTAGATCTTGCATaGCTGAGCCCTTGTGATTAT +
Preference number: 5 (lower is better)
Translates to: TKALFNSICPVFTNKLARLLDLA*LSPCDY
Trigger: ATAATCACAAGGGCTCAGCAATGCAAGATCTAGCAG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTTGCCTCTTTCAAACATaGGGGGAACCAGTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSCLFQT*GEPVEK
Trigger: TTTTTCTACTGGTTCCCCCAATGTTTGAAAGAGGCA...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp ATTCACCTATACACCATGCAGCCACTTGTACCAAAGGTTGTTGAGAATAATCACATTCCATTGCACGCCTaGCAGAAGGGAAAAATTAAA +
Preference number: 5 (lower is better)
Translates to: IHLYTMQPLVPKVVENNHIPLHA*QKGKIK
Trigger: TTTAATTTTTCCCTTCTGCAAGGCGTGCAATGGAAT...GTGATTATTCTCAACAACCTTTGGTACAAGTGGCTGCATGGTGTATAGGTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS TCA 90 bp CTTCATGATAACATCAGTATATCCCAGCACTTCGTATATGCTGTCTaGAAGAAGCTACTTACCGTTGTCAAAACACGCATAATTGTGTCT +
Preference number: 5 (lower is better)
Translates to: LHDNISISQHFVYAV*KKLLTVVKTRIIVS
Trigger: AGACACAATTATGCGTGTTTTGACAACGGTAAGTAGCTTCTTTCAGACAGCATATACGAAGTGCTGGGATATACTGATGTTATCATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569044.1
CDS GCA 90 bp AAGAAGCTACTTACCGTTGTCAAAACACGCATAATTGTGTCTATATaGCATCGTTTGGAAGGTGCATACTTTTCTGCAGCAAGAAAGATT +
Preference number: 5 (lower is better)
Translates to: KKLLTVVKTRIIVSI*HRLEGAYFSAARKI
Trigger: AATCTTTCTTGCTGCAGAAAAGTATGCACCTTCCAAACGATGGCATATAGACACAATTATGCGTGTTTTGACAACGGTAAGTAGCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569044.1
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAGCATATACAGTAATTTaGCCACATTCCGACATCGGT +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQAYTVI*PHSDIG
Trigger: ACCGATGTCGGAATGTGGCAAAATTACTGTATATGC...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CAA 90 bp TTGTCATTGTTCAATAAGAAACGACCCAGGATATTTATGGCTAGGACTCGCAATTCATTCTTGATACAGTaGGTCATGAGAAGATGGACA +
Preference number: 5 (lower is better)
Translates to: LSLFNKKRPRIFMARTRNSFLIQ*VMRRWT
Trigger: TGTCCATCTTCTCATGACCAACTGTATCAAGAATGA...ATTGCGAGTCCTAGCCATAAATATCCTGGGTCGTTTCTTATTGAACAATGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450149.6
ENST00000568327.5
CDS-3UTR CAA 90 bp TTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTCAAAACTCAATTCCATaGCACGCCGTTTTATTGAGA +
Preference number: 5 (lower is better)
Translates to: FIMPRILFPFTRAKLNSIQNSIP*HAVLLR
Trigger: TCTCAATAAAACGGCGTGCAATGGAATTGAGTTTTG...AATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CAA 90 bp TTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTTCTATATGCCATCGTTaGGAAGGTGCATACTTTTCT +
Preference number: 5 (lower is better)
Translates to: FIMPRILFPFTRAKLNSISICHR*EGAYFS
Trigger: AGAAAAGTATGCACCTTCCAAACGATGGCATATAGA...AATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566179.1
ENST00000568327.5
CDS-3UTR CAA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTTCTATATGCCATCGTTaGGAAGGTGCATACTTTTCT +
Preference number: 5 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSSICHR*EGAYFS
Trigger: AGAAAAGTATGCACCTTCCAAACGATGGCATATAGA...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAAATAATCACCAAGAATaGCTTTGTACAGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQNNHQE*LCTGAG
Trigger: TCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATT...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CAA 90 bp ACATCATGTTCTGGTGAATATCCGGACATGATGAGGTTCTTTAAAATACGAACTAATAATCACCAAGAATaGCTTTGTACAGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: TSCSGEYPDMMRFFKIRTNNHQE*LCTGAG
Trigger: TCCAGCGCCTGTACAAAGCAATTCTTGGTGATTATT...AGTTCGTATTTTAAAGAACCTCATCATGTCCGGATATTCACCAGAACATGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp TTCATCATGCCTCGGATATTATTCCCATTTACCAGGGCAAAACTCAATTCCATTCACTTGTACCAAAGGTaGTTGAGAATAATCACCAAG +
Preference number: 5 (lower is better)
Translates to: FIMPRILFPFTRAKLNSIHLYQR*LRIITK
Trigger: CTTGGTGATTATTCTCAACAACCTTTGGTACAAGTG...AATGGAATTGAGTTTTGCCCTGGTAAATGGGAATAATATCCGAGGCATGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565009.5
ENST00000568327.5
CDS-3UTR CAA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCTTCCCAGAGTTCCTTaGATTGAGTGGGATAAAGAA +
Preference number: 5 (lower is better)
Translates to: TKALFNSICPVFTNKLARLPRVP*IEWDKE
Trigger: TTCTTTATCCCACTCAATCAAAGGAACTCTGGGAAG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAAGGTCTGACCAGTTCTaGGTAACAAACATACATGTG +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQRSDQF*VTNIHV
Trigger: CACATGTATGTTTGTTACCAAGAACTGGTCAGACCT...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299980.9
ENST00000564155.5
ENST00000569748.5
CDS-3UTR CAA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCATATGAGAAAACATTaGACAGCTCTTGCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: TKALFNSICPVFTNKLARHMRKH*TALASQ
Trigger: TTGGGAGGCAAGAGCTGTCAAATGTTTTCTCATATG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569748.5
CDS-3UTR CAA 90 bp GAGCCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCGACATCGGTATGTATaGTCTTCTTCTCTAAAAGAT +
Preference number: 5 (lower is better)
Translates to: EPWKFLLQIEHHILHAKSRHRYV*SSSLKD
Trigger: ATCTTTTAGAGAAGAAGACAATACATACCGATGTCG...AGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CAA 90 bp AAAACACGCATAATTGTGTCTATATGCCATCGTTTGGAAGGTGCATACTTTTCTTCATTCTTGATACAGTaGGTCATGAGAAGATGGACA +
Preference number: 5 (lower is better)
Translates to: KTRIIVSICHRLEGAYFSSFLIQ*VMRRWT
Trigger: TGTCCATCTTCTCATGACCAACTGTATCAAGAATGA...AGAAAAGTATGCACCTTCCAAACGATGGCATATAGACACAATTATGCGTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568327.5
CDS-3UTR CAA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGATTAACTGGATTAAATaGGGGACTGCATCATCACGA +
Preference number: 5 (lower is better)
Translates to: TKALFNSICPVFTNKLARINWIK*GTASSR
Trigger: TCGTGATGATGCAGTCCCCAATTTAATCCAGTTAAT...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAAATTAACTGGATTAAATaGGGGACTGCATCATCACGA +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQINWIK*GTASSR
Trigger: TCGTGATGATGCAGTCCCCAATTTAATCCAGTTAAT...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CAA 90 bp ACAAAAGCTCTTTTTAACTCCATCTGTCCAGTGTTTACAAATAAACTCGCAAGGCACTTGTACCAAAGGTaGTTGAGAATAATCACCAAG +
Preference number: 5 (lower is better)
Translates to: TKALFNSICPVFTNKLARHLYQR*LRIITK
Trigger: CTTGGTGATTATTCTCAACAACCTTTGGTACAAGTG...CCTTGCGAGTTTATTTGTAAACACTGGACAGATGGAGTTAAAAAGAGCTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CAA 90 bp CCTTGGAAGTTTCTATTACAAATAGAGCACCATATCCTTCATGCCAAATCTCAACACTTGTACCAAAGGTaGTTGAGAATAATCACCAAG +
Preference number: 5 (lower is better)
Translates to: PWKFLLQIEHHILHAKSQHLYQR*LRIITK
Trigger: CTTGGTGATTATTCTCAACAACCTTTGGTACAAGTG...TTGAGATTTGGCATGAAGGATATGGTGCTCTATTTGTAATAGAAACTTCCAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299980.9
ENST00000569748.5
CDS-3UTR CAA 90 bp ATTAAATCTTACTTTTCTGCAGCAAGAAAGATTCCAGATGCACAGTCTGCTTTATCATTCTTGATACAGTaGGTCATGAGAAGATGGACA +
Preference number: 5 (lower is better)
Translates to: IKSYFSAARKIPDAQSALSFLIQ*VMRRWT
Trigger: TGTCCATCTTCTCATGACCAACTGTATCAAGAATGA...TAAAGCAGACTGTGCATCTGGAATCTTTCTTGCTGCAGAAAAGTAAGATTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565009.5
CDS-3UTR CAA 90 bp GCATTTCCTACATTTTTACTAGTCTCAGTATTAGTGGCAACCTGTGCTAATATACGACATCGGTATGTATaGTCTTCTTCTCTAAAAGAT +
Preference number: 5 (lower is better)
Translates to: AFPTFLLVSVLVATCANIRHRYV*SSSLKD
Trigger: ATCTTTTAGAGAAGAAGACAATACATACCGATGTCG...TATATTAGCACAGGTTGCCACTAATACTGAGACTAGTAAAAATGTAGGAAATGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450149.6
ENST00000565009.5
ENST00000568327.5
CDS TCA 72 bp GGGCTGTCCGGATGGTCCGGATCAGCTCCCGCAATCTaGTGGGGGCTGGCATCCTCGGCGGGGCAACGCCAC +
Preference number: 6 (lower is better)
Translates to: GLSGWSGSAPAI*WGLASSAGQRH
Trigger: GTGGCGTTGCCCCGCCGAGGATGCCAGCCCCCATCAGATTGCGGGAGCTGATCCGGACCATCCGGACAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567583.1
ENST00000568327.5
CDS TCA 72 bp GGGCTGTCCGGATGGTCCGGATCAGCTCCCGCAATCTaGTGGGGGCTGGCATCCTCGGCCCGAAACCTCGAA +
Preference number: 6 (lower is better)
Translates to: GLSGWSGSAPAI*WGLASSARNLE
Trigger: TTCGAGGTTTCGGGCCGAGGATGCCAGCCCCCATCAGATTGCGGGAGCTGATCCGGACCATCCGGACAGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000450149.6
ENST00000565009.5
CDS TCA 72 bp CAGGCAATCAGGAAGACCGGGAGAATTATTAGACGCTaGCGTCCGCAGGGCCAGGAGCGGCGGGGCAACGCC +
Preference number: 6 (lower is better)
Translates to: QAIRKTGRIIRR*RPQGQERRGNA
Trigger: GGCGTTGCCCCGCCGCTCCTGGCCCTGCGGACGTCAGCGTCTAATAATTCTCCCGGTCTTCCTGATTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000563104.5
ENST00000565161.1
ENST00000565412.5
ENST00000569748.5
ENST00000569975.5
ENST00000570017.1
CDS TCA 72 bp GGGCTGTCCGGATGGTCCGGATCAGCTCCCGCAATCTaGTGGGGGCTGGCATCCCTGAGCGAGTGGTTCGAT +
Preference number: 6 (lower is better)
Translates to: GLSGWSGSAPAI*WGLASLSEWFD
Trigger: ATCGAACCACTCGCTCAGGGATGCCAGCCCCCATCAGATTGCGGGAGCTGATCCGGACCATCCGGACAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565412.5
CDS TCA 72 bp GGGCTGTCCGGATGGTCCGGATCAGCTCCCGCAATCTaGTGGGGGCTGGCATCCTCTGACACGGGTACAAGA +
Preference number: 6 (lower is better)
Translates to: GLSGWSGSAPAI*WGLASSDTGTR
Trigger: TCTTGTACCCGTGTCAGAGGATGCCAGCCCCCATCAGATTGCGGGAGCTGATCCGGACCATCCGGACAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569185.5
CDS CCA 72 bp TCTGACACGGGTACAAGACACAAGAACGCTGATACGTaGCTCAGAGAAGACACGCGGGGGTGGGGCCCGCCC +
Preference number: 6 (lower is better)
Translates to: SDTGTRHKNADT*LREDTRGWGPP
Trigger: GGGCGGGCCCCACCCCCGCGTGTCTTCTCTGAGCCACGTATCAGCGTTCTTGTGTCTTGTACCCGTGTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569185.5
CDS TCA 72 bp CAGGCAATCAGGAAGACCGGGAGAATTATTAGACGCTaGCGTCCGCAGGGCCAGGAGCGGCCCGAAACCTCG +
Preference number: 6 (lower is better)
Translates to: QAIRKTGRIIRR*RPQGQERPETS
Trigger: CGAGGTTTCGGGCCGCTCCTGGCCCTGCGGACGTCAGCGTCTAATAATTCTCCCGGTCTTCCTGATTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566161.5
ENST00000570297.5
CDS GCA 72 bp AGGATCGGGGCTGTCACTGATGACGCGAGACGCTGCTaGCGAGTCACCGCTGCGATGAGTCTGAGCGAGAAA +
Preference number: 6 (lower is better)
Translates to: RIGAVTDDARRC*RVTAAMSLSEK
Trigger: TTTCTCGCTCAGACTCATCGCAGCGGTGACTCGGCAGCAGCGTCTCGCGTCATCAGTGACAGCCCCGATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393512.7
CDS CCA 72 bp CCGAGGACTATTTGCCAAGGAGGAGGCGACTGCTCCTaGCAGAGCGACGCAAACGTAGCAAGGATCGGGGCT +
Preference number: 6 (lower is better)
Translates to: PRTICQGGGDCS*QSDANVARIGA
Trigger: AGCCCCGATCCTTGCTACGTTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393512.7
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS GCA 72 bp ACCCTGCCGAGGACTATTTGCCAAGGAGGAGGCGACTaGTCCTGGCAGAGCGACGCAAACGTAGCAAGGATC +
Preference number: 6 (lower is better)
Translates to: TLPRTICQGGGD*SWQSDANVARI
Trigger: GATCCTTGCTACGTTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393512.7
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS GCA 72 bp AATTATCCAAGAACTCGGACCCTGCCGAGGACTATTTaGCAAGGAGGAGGCGACTGCTCCTGGCAGAGCGAC +
Preference number: 6 (lower is better)
Translates to: NYPRTRTLPRTI*QGGGDCSWQSD
Trigger: GTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTGGATAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393512.7
ENST00000565161.1
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS CAA 72 bp GAATTATCCAAGAACTCGGACCCTGCCGAGGACTATTaGCCAAGGAGGAGGCGACTGCTCCTGGCAGAGCGA +
Preference number: 6 (lower is better)
Translates to: ELSKNSDPAEDY*PRRRRLLLAER
Trigger: TCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTGGATAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393512.7
ENST00000565161.1
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS GCA 72 bp CTCCTGCAAGATCTCTGCACATCTCTGAGGAGCCCATaGAGCCGAGGGTACAAAGTGCTAACCCCTGTACGA +
Preference number: 6 (lower is better)
Translates to: LLQDLCTSLRSP*SRGYKVLTPVR
Trigger: TCGTACAGGGGTTAGCACTTTGTACCCTCGGCTGCATGGGCTCCTCAGAGATGTGCAGAGATCTTGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000450149.6
ENST00000563104.5
ENST00000563259.5
ENST00000565009.5
ENST00000568327.5
ENST00000569748.5
CDS CAA 90 bp CCGGATTGCAGCACATTCTTTCTGGATCATTTCTCGTTCTTCAGCTaGGGTTCGGGCTGTCCGGATGGTCCGGATCAGCTCCCGCAATCT +
Preference number: 6 (lower is better)
Translates to: PDCSTFFLDHFSFFS*GSGCPDGPDQLPQS
Trigger: AGATTGCGGGAGCTGATCCGGACCATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGAAATGATCCAGAAAGAATGTGCTGCAATCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000450149.6
ENST00000563104.5
ENST00000563259.5
ENST00000565009.5
ENST00000565412.5
ENST00000566161.5
ENST00000567583.1
ENST00000568327.5
ENST00000569185.5
ENST00000569748.5
ENST00000569975.5
ENST00000570297.5
CDS CAA 90 bp TTTTCTCTCGAATTATCCAAGAACTCGGACCCTGCCGAGGACTATTaGCCAAGGAGGAGGCGACTGCTCCTGGCAGAGCGACGCAAACGT +
Preference number: 6 (lower is better)
Translates to: FSLELSKNSDPAEDY*PRRRRLLLAERRKR
Trigger: ACGTTTGCGTCGCTCTGCCAGGAGCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTGGATAATTCGAGAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393512.7
ENST00000565161.1
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS TCA 72 bp GGGCTGTCCGGATGGTCCGGATCAGCTCCCGCAATCTaGTGGGGGCTGGCATCCTCTCAGATTAATATTTTT +
Preference number: 6 (lower is better)
Translates to: GLSGWSGSAPAI*WGLASSQINIF
Trigger: AAAAATATTAATCTGAGAGGATGCCAGCCCCCATCAGATTGCGGGAGCTGATCCGGACCATCCGGACAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569975.5
CDS CCA 72 bp GCACATTCTTTCTGGATCATTTCTCGTTCTTCAGCTTaGGTTCGGGCTGTCCGGATGGTCCGGATCAGCTCC +
Preference number: 6 (lower is better)
Translates to: AHSFWIISRSSA*VRAVRMVRISS
Trigger: GGAGCTGATCCGGACCATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGAAATGATCCAGAAAGAATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000450149.6
ENST00000563104.5
ENST00000563259.5
ENST00000565009.5
ENST00000565412.5
ENST00000566161.5
ENST00000567583.1
ENST00000568327.5
ENST00000569185.5
ENST00000569748.5
ENST00000569975.5
ENST00000570297.5
CDS GCA 72 bp TGCCTTTTCTCTCGAATTATCCAAGAACTCGGACCCTaGCGAGGACTATTTGCCAAGGAGGAGGCGACTGCT +
Preference number: 6 (lower is better)
Translates to: CLFSRIIQELGP*RGLFAKEEATA
Trigger: AGCAGTCGCCTCCTCCTTGGCAAATAGTCCTCGGCAGGGTCCGAGTTCTTGGATAATTCGAGAGAAAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393512.7
ENST00000565161.1
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS CCA 72 bp CCTATTGAGGAAACTTCGCTCCCTGTCCTCCTCTCCTaGTCGTTTCCGTGTCCTCGTACTGCAACTTATCGT +
Preference number: 6 (lower is better)
Translates to: PIEETSLPVLLS*SFPCPRTATYR
Trigger: ACGATAAGTTGCAGTACGAGGACACGGAAACGACCAGGAGAGGAGGACAGGGAGCGAAGTTTCCTCAATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565161.1
CDS CAA 72 bp AGCACATTCTTTCTGGATCATTTCTCGTTCTTCAGCTaGGGTTCGGGCTGTCCGGATGGTCCGGATCAGCTC +
Preference number: 6 (lower is better)
Translates to: STFFLDHFSFFS*GSGCPDGPDQL
Trigger: GAGCTGATCCGGACCATCCGGACAGCCCGAACCCAAGCTGAAGAACGAGAAATGATCCAGAAAGAATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000450149.6
ENST00000563104.5
ENST00000563259.5
ENST00000565009.5
ENST00000565412.5
ENST00000566161.5
ENST00000567583.1
ENST00000568327.5
ENST00000569185.5
ENST00000569748.5
ENST00000569975.5
ENST00000570297.5
CDS CCA 72 bp ACTATTGAGGAAACTTCGCTCCCTGTCCTCCTCTCCTaGTCGTTTCCGTGTCCTCGTACTGCAACTTATCGT +
Preference number: 6 (lower is better)
Translates to: TIEETSLPVLLS*SFPCPRTATYR
Trigger: ACGATAAGTTGCAGTACGAGGACACGGAAACGACCAGGAGAGGAGGACAGGGAGCGAAGTTTCCTCAATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393512.7
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS CCA 72 bp GGCACAAGCTACCTTTCTGAAATGCGCAAGCATGTCTaGGCTTCGCTCACACATTTCTGTGAGGAGGACTAC +
Preference number: 6 (lower is better)
Translates to: GTSYLSEMRKHV*ASLTHFCEEDY
Trigger: GTAGTCCTCCTCACAGAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCATTTCAGAAAGGTAGCTTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565642.5
ENST00000568327.5
CDS CAA 90 bp CCGCATTCGCAGCTGTTGCTTCTGAGGGTTCAGAACTTTAATGACTaGTGTGATGGTCCCCGTGTTAAATGCTGGGACAATGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: PHSQLLLLRVQNFND*CDGPRVKCWDNAAA
Trigger: AGCAGCAGCATTGTCCCAGCATTTAACACGGGGACCATCACACAAGTCATTAAAGTTCTGAACCCTCAGAAGCAACAGCTGCGAATGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS GCA 72 bp AATGCTGGGACAATGCTGCTGCTAGGAGACAAGAGCTaGAGCTGGAATGTCTTTGGTACTGCAGCTTGGAAA +
Preference number: 6 (lower is better)
Translates to: NAGTMLLLGDKS*SWNVFGTAAWK
Trigger: TTTCCAAGCTGCAGTACCAAAGACATTCCAGCTGCAGCTCTTGTCTCCTAGCAGCAGCATTGTCCCAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS GCA 72 bp CTGGTCGTTTCCGTGTCCTCGTACTGCAACTTATCGTaGCTTTTCTCTCGAATTATCCAAGAACTCGGACCC +
Preference number: 6 (lower is better)
Translates to: LVVSVSSYCNLS*LFSRIIQELGP
Trigger: GGGTCCGAGTTCTTGGATAATTCGAGAGAAAAGGCACGATAAGTTGCAGTACGAGGACACGGAAACGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393512.7
ENST00000565161.1
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS CAA 72 bp AGTGGGATAAAGAATGAGAATGGTGCCAAACCCTCATaGCCAGGACTGAGGGGGAAAGTTGTTCACCTCTGC +
Preference number: 6 (lower is better)
Translates to: SGIKNENGAKPS*PGLRGKVVHLC
Trigger: GCAGAGGTGAACAACTTTCCCCCTCAGTCCTGGCAATGAGGGTTTGGCACCATTCTCATTCTTTATCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
ENST00000570052.1
CDS GCA 72 bp TGTCCTCCTCTCCTGGTCGTTTCCGTGTCCTCGTACTaGAACTTATCGTGCCTTTTCTCTCGAATTATCCAA +
Preference number: 6 (lower is better)
Translates to: CPPLLVVSVSSY*NLSCLFSRIIQ
Trigger: TTGGATAATTCGAGAGAAAAGGCACGATAAGTTGCAGTACGAGGACACGGAAACGACCAGGAGAGGAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393512.7
ENST00000565161.1
ENST00000566161.5
ENST00000569748.5
ENST00000570017.1
CDS CCA 72 bp TTTAATGACTTGTGTGATGGTCCCCGTGTTAAATGCTaGGACAATGCTGCTGCTAGGAGACAAGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: FNDLCDGPRVKC*DNAAARRQELQ
Trigger: CTGCAGCTCTTGTCTCCTAGCAGCAGCATTGTCCCAGCATTTAACACGGGGACCATCACACAAGTCATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS TCA 72 bp CTTCCCAGAGTTCCTTTGATTGAGTGGGATAAAGAATaGGAATGGTGCCAAACCCTCATTGCCAGGACTGAG +
Preference number: 6 (lower is better)
Translates to: LPRVPLIEWDKE*EWCQTLIARTE
Trigger: CTCAGTCCTGGCAATGAGGGTTTGGCACCATTCTCATTCTTTATCCCACTCAATCAAAGGAACTCTGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
ENST00000570052.1
CDS GCA 72 bp AACTTTAATGACTTGTGTGATGGTCCCCGTGTTAAATaGTGGGACAATGCTGCTGCTAGGAGACAAGAGCTG +
Preference number: 6 (lower is better)
Translates to: NFNDLCDGPRVK*WDNAAARRQEL
Trigger: CAGCTCTTGTCTCCTAGCAGCAGCATTGTCCCAGCATTTAACACGGGGACCATCACACAAGTCATTAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS GCA 72 bp TACGAACTAATTGGGGCACAAGCTACCTTTCTGAAATaGGCAAGCATGTCTGGGCTTCGCTCACACATTTCT +
Preference number: 6 (lower is better)
Translates to: YELIGAQATFLK*ASMSGLRSHIS
Trigger: AGAAATGTGTGAGCGAAGCCCAGACATGCTTGCGCATTTCAGAAAGGTAGCTTGTGCCCCAATTAGTTCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565642.5
ENST00000568327.5
CDS CCA 72 bp AACATAATCTGCTTCATAAACATTACCCTGAGCGAGTaGTTCGATGGATCTCCTACACCGAGTCCTAACCGG +
Preference number: 6 (lower is better)
Translates to: NIICFINITLSE*FDGSPTPSPNR
Trigger: CCGGTTAGGACTCGGTGTAGGAGATCCATCGAACCACTCGCTCAGGGTAATGTTTATGAAGCAGATTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565161.1
ENST00000569748.5
ENST00000570297.5
CDS TCA 72 bp TTCACCTCTGCTAGATCTTGCATTGCTGAGCCCTTGTaGTTATATGTAAGCTTGATCCGCATTCGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: FTSARSCIAEPL*LYVSLIRIRSC
Trigger: ACAGCTGCGAATGCGGATCAAGCTTACATATAATCACAAGGGCTCAGCAATGCAAGATCTAGCAGAGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
ENST00000570052.1
CDS CAA 72 bp CAGCTGTTGCTTCTGAGGGTTCAGAACTTTAATGACTaGTGTGATGGTCCCCGTGTTAAATGCTGGGACAAT +
Preference number: 6 (lower is better)
Translates to: QLLLLRVQNFND*CDGPRVKCWDN
Trigger: ATTGTCCCAGCATTTAACACGGGGACCATCACACAAGTCATTAAAGTTCTGAACCCTCAGAAGCAACAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000564155.5
ENST00000569748.5
CDS TCA 72 bp CCGACATCGGTATGTATTGTCTTCTTCTCTAAAAGATaGCCGGATTGCAGCACATTCTTTCTGGATCATTTC +
Preference number: 6 (lower is better)
Translates to: PTSVCIVFFSKR*PDCSTFFLDHF
Trigger: GAAATGATCCAGAAAGAATGTGCTGCAATCCGGTCATCTTTTAGAGAAGAAGACAATACATACCGATGTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000450149.6
ENST00000563104.5
ENST00000563259.5
ENST00000565009.5
ENST00000565412.5
ENST00000566161.5
ENST00000567583.1
ENST00000568327.5
ENST00000569185.5
ENST00000569748.5
ENST00000569975.5
ENST00000570297.5
CDS TCA 72 bp GTACAAAGTGCTAACCCCTGTACGAATTGCGTGCTATaGTTAAGATCATTCTTGATACAGTTGGTCATGAGA +
Preference number: 6 (lower is better)
Translates to: VQSANPCTNCVL*LRSFLIQLVMR
Trigger: TCTCATGACCAACTGTATCAAGAATGATCTTAATCATAGCACGCAATTCGTACAGGGGTTAGCACTTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000450149.6
ENST00000563104.5
ENST00000563259.5
ENST00000565009.5
ENST00000568327.5
ENST00000569185.5
ENST00000569748.5
CDS TCA 72 bp AACATCAGTATATCCCAGCACTTCGTATATGCTGTCTaGAAGAAGCTACTTACCGTTGTCAAAACACGCATA +
Preference number: 6 (lower is better)
Translates to: NISISQHFVYAV*KKLLTVVKTRI
Trigger: TATGCGTGTTTTGACAACGGTAAGTAGCTTCTTTCAGACAGCATATACGAAGTGCTGGGATATACTGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569044.1
CDS CCA 72 bp CCGGACATGATGAGGTTCTTTAAAATACGAACTAATTaGGGCACAAGCTTTTCATTCTTTCTGAAATGCGCA +
Preference number: 6 (lower is better)
Translates to: PDMMRFFKIRTN*GTSFSFFLKCA
Trigger: TGCGCATTTCAGAAAGAATGAAAAGCTTGTGCCCCAATTAGTTCGTATTTTAAAGAACCTCATCATGTCCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393512.7
CDS CAA 72 bp AACAAAACAACAACATATACACACACACACGAAAAATaGGGAAAGAAGTTGGTCGGAAGGTTAGAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: NKTTTYTHTHEK*GKKLVGRLERG
Trigger: GCCTCTCTCTAACCTTCCGACCAACTTCTTTCCCAATTTTTCGTGTGTGTGTGTATATGTTGTTGTTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563259.5
CDS CAA 90 bp ATGTGCATATACAGTAATTTTGCCACATTCCGACATCGGTATGTATaGTCTTCTTCTCTAAAAGATGACCGGATTGCAGCACATTCTTTC +
Preference number: 6 (lower is better)
Translates to: MCIYSNFATFRHRYV*SSSLKDDRIAAHSF
Trigger: GAAAGAATGTGCTGCAATCCGGTCATCTTTTAGAGAAGAAGACAATACATACCGATGTCGGAATGTGGCAAAATTACTGTATATGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000299980.9
ENST00000393512.7
ENST00000450149.6
ENST00000563104.5
ENST00000563259.5
ENST00000565009.5
ENST00000565412.5
ENST00000566161.5
ENST00000567583.1
ENST00000568327.5
ENST00000569185.5
ENST00000569748.5
CDS GCA 72 bp CATCATCACGAACATAACTTCCTGCCTAAAAGGAAATaGAGACAATTACCCCTAGAAACACACAGAAATGAT +
Preference number: 6 (lower is better)
Translates to: HHHEHNFLPKRK*RQLPLETHRND
Trigger: ATCATTTCTGTGTGTTTCTAGGGGTAATTGTCTGCATTTCCTTTTAGGCAGGAAGTTATGTTCGTGATGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562934.1
CDS TCA 72 bp AAAGATGTCAGAGCCACATATTCGCAATCCACTCTCTaGCTTAATATCCATGATAGTCAAAACCGTTTCATA +
Preference number: 6 (lower is better)
Translates to: KDVRATYSQSTL*LNIHDSQNRFI
Trigger: TATGAAACGGTTTTGACTATCATGGATATTAAGTCAGAGAGTGGATTGCGAATATGTGGCTCTGACATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566179.1