RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP1B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100280

Ensembl transcript IDs: ENST00000317368.11, ENST00000357586.7, ENST00000405198.6, ENST00000415756.1, ENST00000421126.5, ENST00000432560.6, ENST00000472057.1, ENST00000473606.1, ENST00000482818.1

Found 814 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCCAGTCGGTGGGGAGCCCGAGACAGGGGCTCTGGGAGCTTCTaGCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCC +
Preference number: 1 (lower is better)
Translates to: AASRWGARDRGSGSF*LVLTMWVSTREAVA
Trigger: GGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGGGCTCCCCACCGACTGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR TCA 90 bp GGTGGGGAGCCCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTaGCCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGGCAC +
Preference number: 1 (lower is better)
Translates to: GGEPETGALGASAWS*PCGSALGRLWPNWH
Trigger: GTGCCAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGGGCTCCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTaGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGAAGATGTG +
Preference number: 1 (lower is better)
Translates to: RDRVGSAIRTREPTE*PGAPPGPSCEEEDV
Trigger: CACATCTTCCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CCA 90 bp GCCCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTaGGTCAGCACTCGGGAGGCTGTGGCCCAACTGGCACAGCTGCAG +
Preference number: 1 (lower is better)
Translates to: ARDRGSGSFCLVLTM*VSTREAVAQLAQLQ
Trigger: CTGCAGCTGTGCCAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR TCA 90 bp AACCCCTCCCTGCACACCCAGGCCAGGTTGGCAGGGTCCATCCCATaGGAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACC +
Preference number: 1 (lower is better)
Translates to: NPSLHTQARLAGSIP*EVAVEGPLTPTGET
Trigger: GGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTCTCATGGGATGGACCCTGCCAACCTGGCCTGGGTGTGCAGGGAGGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CCA 90 bp GCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTTCTGTaGCTGCTCTGGCTCTGTTTCCTTTGGTCCCCACCTCACTTAACC +
Preference number: 1 (lower is better)
Translates to: AGGASSTLTLQAQLL*LLWLCFLWSPPHLT
Trigger: GGTTAAGTGAGGTGGGGACCAAAGGAAACAGAGCCAGAGCAGCCACAGAAGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CCA 90 bp CTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTaGGGCAGAAGTGGGGAGTTGGGGATAGTGCAGCTGCCAGTCGGT +
Preference number: 1 (lower is better)
Translates to: LRGDTEECITGSDHP*GRSGELGIVQLPVG
Trigger: ACCGACTGGCAGCTGCACTATCCCCAACTCCCCACTTCTGCCCCAAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CCA 90 bp GCAAGCTCCACACTCACCCTTCAGGCACAGCTTCTGTGGCTGCTCTaGCTCTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCAC +
Preference number: 1 (lower is better)
Translates to: ASSTLTLQAQLLWLL*LCFLWSPPHLTPHH
Trigger: GTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAGAGCCAGAGCAGCCACAGAAGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR TCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGGGCTGCCGGGGCTGTaGGCCGGAGGGGCAAGCTCC +
Preference number: 2 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAGLPGL*AGGASS
Trigger: GGAGCTTGCCCCTCCGGCTCACAGCCCCGGCAGCCC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR TCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTGGGCTGCCGGGGCTGTaGGCCGGAGGGGCAAGCTCC +
Preference number: 2 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAGLPGL*AGGASS
Trigger: GGAGCTTGCCCCTCCGGCTCACAGCCCCGGCAGCCC...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR TCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGGCTGCCGGGGCTGTaGGCCGGAGGGGCAAGCTCC +
Preference number: 2 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAGLPGL*AGGASS
Trigger: GGAGCTTGCCCCTCCGGCTCACAGCCCCGGCAGCCC...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTCCCAGGAGGGGGTGGTaGCCTACCCCAGGGATCGGG +
Preference number: 2 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAPRRGW*PTPGIG
Trigger: CCCGATCCCTGGGGTAGGGCACCACCCCCTCCTGGG...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGAGGGGCCTCCTCGATaGGGCGGGCAGAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAEGPPR*GGQKAG
Trigger: CCCAGCCTTCTGCCCGCCCCATCGAGGAGGCCCCTC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGAGGGGCCTCCTCGATaGGGCGGGCAGAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPEGPPR*GGQKAG
Trigger: CCCAGCCTTCTGCCCGCCCCATCGAGGAGGCCCCTC...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTGAGGGGCCTCCTCGATaGGGCGGGCAGAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAEGPPR*GGQKAG
Trigger: CCCAGCCTTCTGCCCGCCCCATCGAGGAGGCCCCTC...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR TCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGCAGGGTCCATCCCATaGGAGGTGGCAGTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAAGSIP*EVAVEG
Trigger: GCCCTCCACTGCCACCTCTCATGGGATGGACCCTGC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTAGGAGGAAGATGTGCTaGCCCCGAGGGGCCTCCTCG +
Preference number: 2 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTARRKMC*PRGASS
Trigger: CGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCT...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGCGAGGAGGAAGATGTaGTGCCCCCGAGGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQARRKM*CPRGAS
Trigger: GGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGC...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAGAGGGGCCTCCTCGATaGGGCGGGCAGAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGEGPPR*GGQKAG
Trigger: CCCAGCCTTCTGCCCGCCCCATCGAGGAGGCCCCTC...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGGGTGGTGCAGGCCCTaGGCTCCTCCCAGCCTAGCT +
Preference number: 2 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQGWCRP*APPSLA
Trigger: AGCTAGGCTGGGAGGAGCCCAGGGCCTGCACCACCC...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CAA 90 bp CGGTGGGGAGCCCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTaGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGGCA +
Preference number: 2 (lower is better)
Translates to: RWGARDRGSGSFCLV*TMWVSTREAVAQLA
Trigger: TGCCAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGGGCTCCCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCCGCCTGGTCCCTCCTaGGAGGAGGAAGATGTGCTG +
Preference number: 2 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQPPGPS*EEEDVL
Trigger: CAGCACATCTTCCTCCTCGCAGGAGGGACCAGGCGG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACCCCAGGAGGGGGTGGTaGCCTACCCCAGGGATCGGG +
Preference number: 2 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHPRRGW*PTPGIG
Trigger: CCCGATCCCTGGGGTAGGGCACCACCCCCTCCTGGG...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTCCCAGAGCACGGGAGTaGACTGCGCTCTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAPRARE*TALSPQ
Trigger: CTGGGGTGAGAGCGCAGTGCACTCCCGTGCTCTGGG...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR TCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGGCCCCAGGCCCTAAGTaGGCAGCTCTCCTGGTACCA +
Preference number: 2 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRAPGPK*AALLVP
Trigger: TGGTACCAGGAGAGCTGCTCACTTAGGGCCTGGGGC...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCAGGAGGAAGATGTGCTaGCCCCGAGGGGCCTCCTCG +
Preference number: 2 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGRRKMC*PRGASS
Trigger: CGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCT...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCAGGAGGAAGATGTGCTaGCCCCGAGGGGCCTCCTCG +
Preference number: 2 (lower is better)
Translates to: AVEGPLTPTGETKEPGAARRKMC*PRGASS
Trigger: CGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCT...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTACCGCCTGGTCCCTCCTaGGAGGAGGAAGATGTGCTG +
Preference number: 2 (lower is better)
Translates to: SLALPLCRHLQLLEPQALPPGPS*EEEDVL
Trigger: CAGCACATCTTCCTCCTCGCAGGAGGGACCAGGCGG...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTCCGCCTGGTCCCTCCTaGGAGGAGGAAGATGTGCTG +
Preference number: 2 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAPPGPS*EEEDVL
Trigger: CAGCACATCTTCCTCCTCGCAGGAGGGACCAGGCGG...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTGGATCGGGTGGGTTCTaGCATCAGGACCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAGSGGF*HQDQGA
Trigger: GGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCC...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCACCAGCCTGGTGGTTaGAAGTGGGTGGTGCAGGCC +
Preference number: 2 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQHQPGG*KWVVQA
Trigger: GGCCTGCACCACCCACTTGCAACCACCAGGCTGGTG...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCACCCAACTGGCACAGCTaGAGGGCACCAGCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAPNWHS*RAPAWW
Trigger: CCACCAGGCTGGTGCCCTGCAGCTGTGCCAGTTGGG...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTAGGGAGCCCACTGAGTaGCCTGGAGCCCCGCCTGGT +
Preference number: 2 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFREPTE*PGAPPG
Trigger: ACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCT...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGAGGGAGCCCACTGAGTaGCCTGGAGCCCCGCCTGGT +
Preference number: 2 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVREPTE*PGAPPG
Trigger: ACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCT...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACGGGTGGTGCAGGCCCTaGGCTCCTCCCAGCCTAGCT +
Preference number: 2 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHGWCRP*APPSLA
Trigger: AGCTAGGCTGGGAGGAGCCCAGGGCCTGCACCACCC...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCAGGGCACCAGCCTGGTaGTTGCAAGTGGGTGGTGCA +
Preference number: 2 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEARAPAW*LQVGGA
Trigger: TGCACCACCCACTTGCAACCACCAGGCTGGTGCCCT...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCACTCGGGAGGCTGTaGCCCAACTGGCACAGCTGC +
Preference number: 2 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAALGRL*PNWHSC
Trigger: GCAGCTGTGCCAGTTGGGCCACAGCCTCCCGAGTGC...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGACCGCCTGGTCCCTCCTaGGAGGAGGAAGATGTGCTG +
Preference number: 2 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGPPGPS*EEEDVL
Trigger: CAGCACATCTTCCTCCTCGCAGGAGGGACCAGGCGG...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCCCAGGAGGGGGTGGTaGCCTACCCCAGGGATCGGG +
Preference number: 2 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLPRRGW*PTPGIG
Trigger: CCCGATCCCTGGGGTAGGGCACCACCCCCTCCTGGG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCTAGCTCTGCCCCTCTaGCGGCACCTACAGCTCCTT +
Preference number: 2 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRLALPL*RHLQLL
Trigger: AAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAG...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTGCCTGGAGCCCCGCCTaGTCCCTCCTGCGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLAWSPA*SLLRGG
Trigger: TCCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGC...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTACACCCAGGCCAGGTTaGCAGGGTCCATCCCATGAG +
Preference number: 2 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWATPRPG*QGPSHE
Trigger: CTCATGGGATGGACCCTGCCAACCTGGCCTGGGTGT...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGGATCGGGTGGGTTCTaGCATCAGGACCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFGSGGF*HQDQGA
Trigger: GGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCC...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTAGGGAGCCCACTGAGTaGCCTGGAGCCCCGCCTGGT +
Preference number: 2 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLREPTE*PGAPPG
Trigger: ACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCT...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCCAGGCACAGCTTCTGTaGCTGCTCTGGCTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAQAQLL*LLWLCF
Trigger: GAAACAGAGCCAGAGCAGCCACAGAAGCTGTGCCTG...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGCCTGGTGGTTGCAAGTaGGTGGTGCAGGCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLPGGCK*VVQALG
Trigger: GCCCAGGGCCTGCACCACCCACTTGCAACCACCAGG...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTAGGCTGTGGCCCAACTaGCACAGCTGCAGGGCACCA +
Preference number: 2 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFRLWPN*HSCRAP
Trigger: TGGTGCCCTGCAGCTGTGCCAGTTGGGCCACAGCCT...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACAGGCTGTGGCCCAACTaGCACAGCTGCAGGGCACCA +
Preference number: 2 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHRLWPN*HSCRAP
Trigger: TGGTGCCCTGCAGCTGTGCCAGTTGGGCCACAGCCT...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTCCCTTGGGGCAGAAGTaGGGAGTTGGGGATAGTGCA +
Preference number: 2 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAPLGQK*GVGDSA
Trigger: TGCACTATCCCCAACTCCCCACTTCTGCCCCAAGGG...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTAGGAGGAAGATGTGCTaGCCCCGAGGGGCCTCCTCG +
Preference number: 2 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLRRKMC*PRGASS
Trigger: CGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCT...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACACACCCAGGCCAGGTTaGCAGGGTCCATCCCATGAG +
Preference number: 2 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHTPRPG*QGPSHE
Trigger: CTCATGGGATGGACCCTGCCAACCTGGCCTGGGTGT...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGGCAGTGACCACCCTTaGGGCAGAAGTGGGGAGTTG +
Preference number: 2 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFGSDHP*GRSGEL
Trigger: CAACTCCCCACTTCTGCCCCAAGGGTGGTCACTGCC...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR TCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAATGTATCACAGGCAGTaGCCACCCTTGGGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAMYHRQ*PPLGQK
Trigger: CTTCTGCCCCAAGGGTGGTCACTGCCTGTGATACAT...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTGGATCGGGTGGGTTCTaGCATCAGGACCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLGSGGF*HQDQGA
Trigger: GGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCC...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCACCAGCCTGGTGGTTaGAAGTGGGTGGTGCAGGCC +
Preference number: 2 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLHQPGG*KWVVQA
Trigger: GGCCTGCACCACCCACTTGCAACCACCAGGCTGGTG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGCAGGCACAGCTTCTGTaGCTGCTCTGGCTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRQAQLL*LLWLCF
Trigger: GAAACAGAGCCAGAGCAGCCACAGAAGCTGTGCCTG...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR TCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCTCAGAGGCGACACTaGGGAATGTATCACAGGCAG +
Preference number: 2 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVAQRRH*GMYHRQ
Trigger: CTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGC...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCTAGCTCTGCCCCTCTaGCGGCACCTACAGCTCCTT +
Preference number: 2 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLLALPL*RHLQLL
Trigger: AAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCTGGTCTTGACCATGTaGGTCAGCACTCGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLLVLTM*VSTREA
Trigger: AGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCAGGCACAGCTTCTGTaGCTGCTCTGGCTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLQAQLL*LLWLCF
Trigger: GAAACAGAGCCAGAGCAGCCACAGAAGCTGTGCCTG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR GCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCCCCAACTGGCACAGCTaGAGGGCACCAGCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTPNWHS*RAPAWW
Trigger: CCACCAGGCTGGTGCCCTGCAGCTGTGCCAGTTGGG...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCGACACAACTGAAACCTaGGAGGCCAGGAGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTDTTET*EARRRA
Trigger: TGCCCTCCTCCTGGCCTCCCAGGTTTCAGTTGTGTC...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR TCA 72 bp CCCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTaGCCATGTGGGTCAGCACTCGGGAGGCTGTGGCCC +
Preference number: 3 (lower is better)
Translates to: PETGALGASAWS*PCGSALGRLWP
Trigger: GGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR GCA 72 bp CGGTGGGGAGCCCGAGACAGGGGCTCTGGGAGCTTCTaGCTGGTCTTGACCATGTGGGTCAGCACTCGGGAG +
Preference number: 3 (lower is better)
Translates to: RWGARDRGSGSF*LVLTMWVSTRE
Trigger: CTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGGGCTCCCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CAA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGGCAGAAGTGGGGAGTaGGGGATAGTGCAGCTGCCA +
Preference number: 3 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAGRSGE*GIVQLP
Trigger: TGGCAGCTGCACTATCCCCAACTCCCCACTTCTGCC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CCA 72 bp AGCTGCCAGTCGGTGGGGAGCCCGAGACAGGGGCTCTaGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAG +
Preference number: 3 (lower is better)
Translates to: SCQSVGSPRQGL*ELLPGLDHVGQ
Trigger: CTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGGGCTCCCCACCGACTGGCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CAA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCACCAGCCTGGTGGTaGCAAGTGGGTGGTGCAGGC +
Preference number: 3 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVAPAWW*QVGGAG
Trigger: GCCTGCACCACCCACTTGCAACCACCAGGCTGGTGC...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CAA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGGCAGAAGTGGGGAGTaGGGGATAGTGCAGCTGCCA +
Preference number: 3 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQGRSGE*GIVQLP
Trigger: TGGCAGCTGCACTATCCCCAACTCCCCACTTCTGCC...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CCA 72 bp AGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTaGGTCAGCACTCGGGAGGCTGTGGCCCAACTGGCA +
Preference number: 3 (lower is better)
Translates to: RGSGSFCLVLTM*VSTREAVAQLA
Trigger: TGCCAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CAA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGAGCTTCTGCCTGGTCTaGACCATGTGGGTCAGCACT +
Preference number: 3 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQSFCLV*TMWVST
Trigger: AGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCT...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CAA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGGCAGAAGTGGGGAGTaGGGGATAGTGCAGCTGCCA +
Preference number: 3 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFGRSGE*GIVQLP
Trigger: TGGCAGCTGCACTATCCCCAACTCCCCACTTCTGCC...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CAA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTAGCTTCTGCCTGGTCTaGACCATGTGGGTCAGCACT +
Preference number: 3 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFSFCLV*TMWVST
Trigger: AGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCT...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CAA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGCTGGCTCTGTTTCCTTaGGTCCCCACCTCACTTAAC +
Preference number: 3 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGLALFP*VPTSLN
Trigger: GTTAAGTGAGGTGGGGACCAAAGGAAACAGAGCCAG...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR-3UTR CAA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGCTGGCTCTGTTTCCTTaGGTCCCCACCTCACTTAAC +
Preference number: 3 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLLALFP*VPTSLN
Trigger: GTTAAGTGAGGTGGGGACCAAAGGAAACAGAGCCAG...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CCA 72 bp GACACTGAGGAATGTATCACAGGCAGTGACCACCCTTaGGGCAGAAGTGGGGAGTTGGGGATAGTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: DTEECITGSDHP*GRSGELGIVQL
Trigger: CAGCTGCACTATCCCCAACTCCCCACTTCTGCCCCAAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CCA 72 bp ACACTCACCCTTCAGGCACAGCTTCTGTGGCTGCTCTaGCTCTGTTTCCTTTGGTCCCCACCTCACTTAACC +
Preference number: 3 (lower is better)
Translates to: TLTLQAQLLWLL*LCFLWSPPHLT
Trigger: GGTTAAGTGAGGTGGGGACCAAAGGAAACAGAGCCAGAGCAGCCACAGAAGCTGTGCCTGAAGGGTGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CCA 72 bp GGAAAACCTAATGCTCTGTCAGACACAACTGAAACCTaGGAGGCCAGGAGGAGGGCAGCAGACACTACAGAG +
Preference number: 3 (lower is better)
Translates to: GKPNALSDTTET*EARRRAADTTE
Trigger: CTCTGTAGTGTCTGCTGCCCTCCTCCTGGCCTCCCAGGTTTCAGTTGTGTCTGACAGAGCATTAGGTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGGGCAGAAGGCTGGGGTaGGCGCTGGCCGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRGRRLG*ALAGVS
Trigger: TGAGACCCCGGCCAGCGCCCACCCCAGCCTTCTGCC...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGGCGAGGAGGAAGATGTaGTGCCCCCGAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRARRKM*CPRGAS
Trigger: GGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGC...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGCCGTGCAGCTGGGGTTaGCCGGCTGGATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRPCSWG*PAGSAA
Trigger: AGCTGCGGATCCAGCCGGGCAACCCCAGCTGCACGG...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGGGGACAGCGTGCAGCTaGGGTTGCCCGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRGTACS*GCPAGS
Trigger: GGATCCAGCCGGGCAACCCCAGCTGCACGCTGTCCC...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGGGCTGGGGTGGGCGCTaGCCGGGGTCTCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRGWGGR*PGSQFL
Trigger: CAAGAACTGAGACCCCGGCCAGCGCCCACCCCAGCC...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGGGGTGGTGCAGGCCCTaGGCTCCTCCCAGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRGWCRP*APPSLA
Trigger: AGCTAGGCTGGGAGGAGCCCAGGGCCTGCACCACCC...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGGGCTGCCGGGGCTGTaGGCCGGAGGGGCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQGLPGL*AGGASS
Trigger: GGAGCTTGCCCCTCCGGCTCACAGCCCCGGCAGCCC...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGGCTGCCGGGGCTGTaGGCCGGAGGGGCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPGLPGL*AGGASS
Trigger: GGAGCTTGCCCCTCCGGCTCACAGCCCCGGCAGCCC...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGGCAGGGTCCATCCCATaGGAGGTGGCAGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRAGSIP*EVAVEG
Trigger: GCCCTCCACTGCCACCTCTCATGGGATGGACCCTGC...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCGCCCTGGGCGGGGATaGCATCTGGCTGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQRPGRG*HLAAPQ
Trigger: CTGGGGAGCAGCCAGATGTCATCCCCGCCCAGGGCG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGGCGGGTGAAGGTGCCTaGGATCTCCAGCCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRAGEGA*DLQPLS
Trigger: GCTAAGGGGCTGGAGATCTCAGGCACCTTCACCCGC...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGAGCCCACCTGGCGGGTaGAGGTGCCTGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRSPPGG*RCLRSP
Trigger: TGGAGATCTCAGGCACCTTCACCCGCCAGGTGGGCT...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTCCCGCGGCTGTCACCTaGCGGGCGGAAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAPAAVT*RAEVSC
Trigger: GCAGCTCACTTCCGCCCGGCAGGTGACAGCCGCGGG...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGTCCACAGCTCCCATCTaGACCGAGGAGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRSTAPI*TEEVAR
Trigger: CCTGGCCACCTCCTCGGTGCAGATGGGAGCTGTGGA...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCCCAGGAGGGGGTGGTaGCCTACCCCAGGGATCGGG +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQPRRGW*PTPGIG
Trigger: CCCGATCCCTGGGGTAGGGCACCACCCCCTCCTGGG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGCACCAGCCTGGTGGTTaGAAGTGGGTGGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRHQPGG*KWVVQA
Trigger: GGCCTGCACCACCCACTTGCAACCACCAGGCTGGTG...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGGGTGGGCCGCTCACTaGGGGGCCGAGGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAGWAAH*GAEVQV
Trigger: AACCTGGACCTCGGCCCCCCAGTGAGCGGCCCACCC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCCTGGGGTTGCCCGGCTaGATCCGCAGCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEALGLPG*IRSSAS
Trigger: GCTGGCGGAGCTGCGGATCCAGCCGGGCAACCCCAG...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAGGCTGGGGTGGGCGCTaGCCGGGGTCTCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRGWGGR*PGSQFL
Trigger: CAAGAACTGAGACCCCGGCCAGCGCCCACCCCAGCC...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAGGGTGGTGCAGGCCCTaGGCTCCTCCCAGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRGWCRP*APPSLA
Trigger: AGCTAGGCTGGGAGGAGCCCAGGGCCTGCACCACCC...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGACAGCTCTGGCTCGGCTaGCAGCAGTGTGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRQLWLG*QQCDQG
Trigger: CCCCTGGTCACACTGCTGTCAGCCGAGCCAGAGCTG...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGCCTGAGTGGCCAAACTaGGGACCTGCTGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRPEWPN*GPAAPA
Trigger: AGCTGGTGCAGCAGGTCCTCAGTTTGGCCACTCAGG...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTCGCCCTGGGCGGGGATaGCATCTGGCTGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWARPGRG*HLAAPQ
Trigger: CTGGGGAGCAGCCAGATGTCATCCCCGCCCAGGGCG...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAGCAGGGTCCATCCCATaGGAGGTGGCAGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRAGSIP*EVAVEG
Trigger: GCCCTCCACTGCCACCTCTCATGGGATGGACCCTGC...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTACCCGCGGCTGTCACCTaGCGGGCGGAAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALPAAVT*RAEVSC
Trigger: GCAGCTCACTTCCGCCCGGCAGGTGACAGCCGCGGG...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCCGCGGCTGTCACCTaGCGGGCGGAAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRPAAVT*RAEVSC
Trigger: GCAGCTCACTTCCGCCCGGCAGGTGACAGCCGCGGG...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTACCCAGGAGGGGGTGGTaGCCTACCCCAGGGATCGGG +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALPRRGW*PTPGIG
Trigger: CCCGATCCCTGGGGTAGGGCACCACCCCCTCCTGGG...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGACCCAGAGCACGGGAGTaGACTGCGCTCTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRPRARE*TALSPQ
Trigger: CTGGGGTGAGAGCGCAGTGCACTCCCGTGCTCTGGG...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTTCTGCACCGAGGAGGTaGCCAGGGGTGGGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTASAPRR*PGVGRS
Trigger: TGAGCGGCCCACCCCTGGCCACCTCCTCGGTGCAGA...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCTGGTTGGGGCTGAGTaGCGCGTGGACCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQLVGAE*RVDLEG
Trigger: CCCCTCCAGGTCCACGCGCCACTCAGCCCCAACCAG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTAGAGGGGCCTCCTCGATaGGGCGGGCAGAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALEGPPR*GGQKAG
Trigger: CCCAGCCTTCTGCCCGCCCCATCGAGGAGGCCCCTC...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGGCCTGGAGCCCCGCCTaGTCCCTCCTGCGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRAWSPA*SLLRGG
Trigger: TCCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGC...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCAGGGAGCCCACTGAGTaGCCTGGAGCCCCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAREPTE*PGAPPG
Trigger: ACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCT...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTAGGGAGCCCACTGAGTaGCCTGGAGCCCCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAREPTE*PGAPPG
Trigger: ACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCT...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGACACCCAGGCCAGGTTaGCAGGGTCCATCCCATGAG +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRTPRPG*QGPSHE
Trigger: CTCATGGGATGGACCCTGCCAACCTGGCCTGGGTGT...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGCGCCCTGGGCGGGGATaGCATCTGGCTGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRRPGRG*HLAAPQ
Trigger: CTGGGGAGCAGCCAGATGTCATCCCCGCCCAGGGCG...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGCGGGGTCTCAGTTCTTaGGGATGGTCTCGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRRGLSS*GWSRRP
Trigger: AGGCCTACGAGACCATCCTCAAGAACTGAGACCCCG...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAAGCCCACCTGGCGGGTaGAGGTGCCTGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRSPPGG*RCLRSP
Trigger: TGGAGATCTCAGGCACCTTCACCCGCCAGGTGGGCT...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGGGCCACGCACACAGCTaGTGTCTTGCGCACATATGG +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRGHAHS*CLAHIW
Trigger: CCATATGTGCGCAAGACAGCAGCTGTGTGCGTGGCC...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCCACCACCTCCTTGGCTaGCACCGGGTCCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAHHLLG*HRVRGQ
Trigger: CTGTCCACGGACCCGGTGGCAGCCAAGGAGGTGGTG...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGCGAGGAGGAAGATGTaGTGCCCCCGAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPARRKM*CPRGAS
Trigger: GGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGC...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGACCGCCTGGTCCCTCCTaGGAGGAGGAAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRPPGPS*EEEDVL
Trigger: CAGCACATCTTCCTCCTCGCAGGAGGGACCAGGCGG...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAGGATCGGGTGGGTTCTaGCATCAGGACCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRGSGGF*HQDQGA
Trigger: GGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCC...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGACCCAGGAGGGGGTGGTaGCCTACCCCAGGGATCGGG +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGPRRGW*PTPGIG
Trigger: CCCGATCCCTGGGGTAGGGCACCACCCCCTCCTGGG...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTCGCGGATGCAGCCCATaGTCCGCACTGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPRGCSP*SALPGL
Trigger: GAGCCCTGGCAGTGCGGACCATGGGCTGCATCCGCG...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCTGCCACCGGGTCCGTaGACAGCAGGCGCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQLPPGP*TAGASR
Trigger: TCTACTGGCGCCTGCTGTCCACGGACCCGGTGGCAG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCCAACACCACCTCCTTaGCTGCCACCGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQPTPPP*LPPGPW
Trigger: CCACGGACCCGGTGGCAGCCAAGGAGGTGGTGTTGG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCGAGGCCGTGCGAGGTaGCAGGCTCTTGTGCACGAC +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQRGRAR*QALVHD
Trigger: GTCGTGCACAAGAGCCTGCCACCTCGCACGGCCTCG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCCGAGGCCGTGCGAGGTaGCAGGCTCTTGTGCACGAC +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEARGRAR*QALVHD
Trigger: GTCGTGCACAAGAGCCTGCCACCTCGCACGGCCTCG...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCGGGTGGGCCGCTCACTaGGGGGCCGAGGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGGWAAH*GAEVQV
Trigger: AACCTGGACCTCGGCCCCCCAGTGAGCGGCCCACCC...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTATCTGCACCGAGGAGGTaGCCAGGGGTGGGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALSAPRR*PGVGRS
Trigger: TGAGCGGCCCACCCCTGGCCACCTCCTCGGTGCAGA...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGTCAGGCCACTGCCGATaGGTGCTCCAAGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRSGHCR*VLQDWL
Trigger: CAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGA...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCTGGTTGGGGCTGAGTaGCGCGTGGACCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQLVGAE*RVDLEG
Trigger: CCCCTCCAGGTCCACGCGCCACTCAGCCCCAACCAG...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGGTGCTGGGACACCTCTaGTGCTCGACACTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRVLGHL*CSTLQG
Trigger: TCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAGCAC...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCGGCAGAAGGCTGGGGTaGGCGCTGGCCGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGGRRLG*ALAGVS
Trigger: TGAGACCCCGGCCAGCGCCCACCCCAGCCTTCTGCC...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGGGCAGAAGGCTGGGGTaGGCGCTGGCCGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWGRRLG*ALAGVS
Trigger: TGAGACCCCGGCCAGCGCCCACCCCAGCCTTCTGCC...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGGAGGGGCCTCCTCGATaGGGCGGGCAGAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWEGPPR*GGQKAG
Trigger: CCCAGCCTTCTGCCCGCCCCATCGAGGAGGCCCCTC...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAGCCTGGAGCCCCGCCTaGTCCCTCCTGCGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGAWSPA*SLLRGG
Trigger: TCCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGC...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGGTGGTGCAGGCCCTaGGCTCCTCCCAGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPGWCRP*APPSLA
Trigger: AGCTAGGCTGGGAGGAGCCCAGGGCCTGCACCACCC...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCCTGGTGGTTGCAAGTaGGTGGTGCAGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQPGGCK*VVQALG
Trigger: GCCCAGGGCCTGCACCACCCACTTGCAACCACCAGG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTCCTGGTGGTTGCAAGTaGGTGGTGCAGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAPGGCK*VVQALG
Trigger: GCCCAGGGCCTGCACCACCCACTTGCAACCACCAGG...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAAGGCTGTGGCCCAACTaGCACAGCTGCAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRRLWPN*HSCRAP
Trigger: TGGTGCCCTGCAGCTGTGCCAGTTGGGCCACAGCCT...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGCTGGTCTTGACCATGTaGGTCAGCACTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRLVLTM*VSTREA
Trigger: AGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAG...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGCCCTTGGGGCAGAAGTaGGGAGTTGGGGATAGTGCA +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRPLGQK*GVGDSA
Trigger: TGCACTATCCCCAACTCCCCACTTCTGCCCCAAGGG...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCCACCAGCTGGGCGTTaGTGTCGTGGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQPPAGR*CRGAWP
Trigger: TGGCCAAGCTCCACGACATCAACGCCCAGCTGGTGG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCAGCTCTGGCTCGGCTaGCAGCAGTGTGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQQLWLG*QQCDQG
Trigger: CCCCTGGTCACACTGCTGTCAGCCGAGCCAGAGCTG...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTAGGCCGAGGTCCAGGTTaGGGAGGTCACCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALGRGPG*GGHPAG
Trigger: ACCTGCTGGGTGACCTCCTCAACCTGGACCTCGGCC...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTCTGTCTGGTTGGGGCTaGGTGGCGCGTGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWALSGWG*VARGPG
Trigger: TCCAGGTCCACGCGCCACTCAGCCCCAACCAGACAG...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCCGAGCCCACCGTGCTaGGAGGCAGGGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQPSPPC*EAGRSP
Trigger: TGGAGATCTCCCTGCCTCTCAGCACGGTGGGCTCGG...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTGCAGGGTCCATCCCATaGGAGGTGGCAGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAAGSIP*EVAVEG
Trigger: GCCCTCCACTGCCACCTCTCATGGGATGGACCCTGC...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGCCCCAGGCCCTAAGTaGGCAGCTCTCCTGGTACCA +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQAPGPK*AALLVP
Trigger: TGGTACCAGGAGAGCTGCTCACTTAGGGCCTGGGGC...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGAAGATGTTGCTGCTCTaGAGCTTGCTGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRKMLLL*SLLLAA
Trigger: GGCTGCGAGCAGCAAGCTGCAGAGCAGCAACATCTT...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGCGTGCAGCTGGGGTTaGCCGGCTGGATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAACSWG*PAGSAA
Trigger: AGCTGCGGATCCAGCCGGGCAACCCCAGCTGCACGC...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTAAGGAGGAAGATGTGCTaGCCCCGAGGGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALRRKMC*PRGASS
Trigger: CGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCT...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTCCCAGGAGGGGGTGGTaGCCTACCCCAGGGATCGGG +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFPRRGW*PTPGIG
Trigger: CCCGATCCCTGGGGTAGGGCACCACCCCCTCCTGGG...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTCCCAGAGCACGGGAGTaGACTGCGCTCTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPPRARE*TALSPQ
Trigger: CTGGGGTGAGAGCGCAGTGCACTCCCGTGCTCTGGG...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCCACCAGCCTGGTGGTTaGAAGTGGGTGGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAHQPGG*KWVVQA
Trigger: GGCCTGCACCACCCACTTGCAACCACCAGGCTGGTG...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCCGCTCACAGATGCTCTaGGCCTCGCGGTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEARSQML*ASRSSL
Trigger: CAAGGACGACCGCGAGGCCCAGAGCATCTGTGAGCG...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCACACCTGGGCGATGTTaGCCTGAGAGGCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEATPGRC*PERPGG
Trigger: TCCGCCTGGCCTCTCAGGCCAACATCGCCCAGGTGT...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCTCTGCACCGAGGAGGTaGCCAGGGGTGGGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAASAPRR*PGVGRS
Trigger: TGAGCGGCCCACCCCTGGCCACCTCCTCGGTGCAGA...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCATCTGCACCGAGGAGGTaGCCAGGGGTGGGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVASAPRR*PGVGRS
Trigger: TGAGCGGCCCACCCCTGGCCACCTCCTCGGTGCAGA...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGACTGGTTGGGGCTGAGTaGCGCGTGGACCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGLVGAE*RVDLEG
Trigger: CCCCTCCAGGTCCACGCGCCACTCAGCCCCAACCAG...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGAGGGGCCTCCTCGATaGGGCGGGCAGAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVEGPPR*GGQKAG
Trigger: CCCAGCCTTCTGCCCGCCCCATCGAGGAGGCCCCTC...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACGCCTGGAGCCCCGCCTaGTCCCTCCTGCGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHAWSPA*SLLRGG
Trigger: TCCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGC...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGCAGGCACAGCTTCTGTaGCTGCTCTGGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRQAQLL*LLWLCF
Trigger: GAAACAGAGCCAGAGCAGCCACAGAAGCTGTGCCTG...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
3UTR CAA 72 bp GCCCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTaGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: ARDRGSGSFCLV*TMWVSTREAVA
Trigger: GGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTCCGTCTGCATGCAGTTaGCCACATCGGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAPSACS*PHRGRG
Trigger: CCCTCTTCCCCGATGTGGTCAACTGCATGCAGACGG...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTTGGGCGATGTTGGCCTaGGAGGCCAGGCGGATCATG +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPWAMLA*EARRIM
Trigger: CATGATCCGCCTGGCCTCTCAGGCCAACATCGCCCA...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGCCGAGGTCCAGGTTaGGGAGGTCACCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAGRGPG*GGHPAG
Trigger: ACCTGCTGGGTGACCTCCTCAACCTGGACCTCGGCC...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGCTGTCTGGTTGGGGCTaGGTGGCGCGTGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRLSGWG*VARGPG
Trigger: TCCAGGTCCACGCGCCACTCAGCCCCAACCAGACAG...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCACCGAGCCCACCGTGCTaGGAGGCAGGGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAPSPPC*EAGRSP
Trigger: TGGAGATCTCCCTGCCTCTCAGCACGGTGGGCTCGG...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCCCGAGCCCACCGTGCTaGGAGGCAGGGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGPSPPC*EAGRSP
Trigger: TGGAGATCTCCCTGCCTCTCAGCACGGTGGGCTCGG...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGCAGGGTCCATCCCATaGGAGGTGGCAGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAAGSIP*EVAVEG
Trigger: GCCCTCCACTGCCACCTCTCATGGGATGGACCCTGC...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTGCCCCAGGCCCTAAGTaGGCAGCTCTCCTGGTACCA +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAAPGPK*AALLVP
Trigger: TGGTACCAGGAGAGCTGCTCACTTAGGGCCTGGGGC...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGGGCAGCTTTCAATCCTaGCATTCGGTGGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRGSFQS*HSVEGK
Trigger: TTTCCCCTCCACCGAATGTCAGGATTGAAAGCTGCC...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCCCATGGTCCGCACTaGCAGGGCTCGGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGAHGPH*QGSDEG
Trigger: CCCCTCATCCGAGCCCTGGCAGTGCGGACCATGGGC...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCCAGCGCTCCGCAGATTaGTCCACCTTGATGGCGCAG +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAQRSAD*STLMAQ
Trigger: CTGCGCCATCAAGGTGGAGCAATCTGCGGAGCGCTG...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGACTCCAGCAGCTCATCTaGGTTGTCGATCCGTTCCGC +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRLQQLI*VVDPFR
Trigger: GCGGAACGGATCGACAACGCAGATGAGCTGCTGGAG...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAGCAGCTGGACCTGTGTaGTCTCGTCATGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRAAGPV*SRHGSP
Trigger: AGGGCTTCCATGACGAGAGCACACAGGTCCAGCTGC...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGTCTCACTCGAGGCCGTaGGAGGTGGCAGGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQSHSRP*EVAGSC
Trigger: ACAAGAGCCTGCCACCTCGCACGGCCTCGAGTGAGA...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCCGCCAGCACCCAGATaGCGTTGGTCAGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQPPAPR*RWSASG
Trigger: CCCTGAAGCTGACCAACGGCATCTGGGTGCTGGCGG...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTCCGCCAGCACCCAGATaGCGTTGGTCAGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPPPAPR*RWSASG
Trigger: CCCTGAAGCTGACCAACGGCATCTGGGTGCTGGCGG...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCGTGCAGCTGGGGTTaGCCGGCTGGATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGACSWG*PAGSAA
Trigger: AGCTGCGGATCCAGCCGGGCAACCCCAGCTGCACGC...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGCGTGCAGCTGGGGTTaGCCGGCTGGATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFACSWG*PAGSAA
Trigger: AGCTGCGGATCCAGCCGGGCAACCCCAGCTGCACGC...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAAGGAGGAAGATGTGCTaGCCCCGAGGGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVARRKMC*PRGASS
Trigger: CGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCT...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCCCCAACTGGCACAGCTaGAGGGCACCAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAPNWHS*RAPAWW
Trigger: CCACCAGGCTGGTGCCCTGCAGCTGTGCCAGTTGGG...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCGGCTCGGTTCGGCTTaGCACCAAAATGTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRRLGSA*HQNVRG
Trigger: GCCGCGGACATTTTGGTGCCAAGCCGAACCGAGCCG...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCGCTCACAGATGCTCTaGGCCTCGCGGTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRRSQML*ASRSSL
Trigger: CAAGGACGACCGCGAGGCCCAGAGCATCTGTGAGCG...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTACACCTGGGCGATGTTaGCCTGAGAGGCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPTPGRC*PERPGG
Trigger: TCCGCCTGGCCTCTCAGGCCAACATCGCCCAGGTGT...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTCCACAATCCAGATCATaGCAGCCCGGGCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAPQSRS*QPGPQA
Trigger: AGCCTGAGGCCCGGGCTGCCATGATCTGGATTGTGG...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGCTGCCACCGGGTCCGTaGACAGCAGGCGCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRLPPGP*TAGASR
Trigger: TCTACTGGCGCCTGCTGTCCACGGACCCGGTGGCAG...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCTGCCACCGGGTCCGTaGACAGCAGGCGCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWLPPGP*TAGASR
Trigger: TCTACTGGCGCCTGCTGTCCACGGACCCGGTGGCAG...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCCGAGGCCGTGCGAGGTaGCAGGCTCTTGTGCACGAC +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAARGRAR*QALVHD
Trigger: GTCGTGCACAAGAGCCTGCCACCTCGCACGGCCTCG...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCCCAGCAGGTCGCCCTaGGCGGGGATGACATCTGGC +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVPSRSP*AGMTSG
Trigger: GCCAGATGTCATCCCCGCCCAGGGCGACCTGCTGGG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGAGATCTCCACTGTCTaGTTGGGGCTGAGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAEISTV*LGLSGA
Trigger: CGCGCCACTCAGCCCCAACCAGACAGTGGAGATCTC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACCTGGGGTTGCCCGGCTaGATCCGCAGCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHLGLPG*IRSSAS
Trigger: GCTGGCGGAGCTGCGGATCCAGCCGGGCAACCCCAG...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGGGACAGCGTGCAGCTaGGGTTGCCCGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGGTACS*GCPAGS
Trigger: GGATCCAGCCGGGCAACCCCAGCTGCACGCTGTCCC...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTGCCTGGTACACGTGCTaGGACACCTCTGGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAAWYTC*DTSGAR
Trigger: TCGAGCACCAGAGGTGTCCCAGCACGTGTACCAGGC...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACGGCTGGGGTGGGCGCTaGCCGGGGTCTCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHGWGGR*PGSQFL
Trigger: CAAGAACTGAGACCCCGGCCAGCGCCCACCCCAGCC...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGGCTGGGGTGGGCGCTaGCCGGGGTCTCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFGWGGR*PGSQFL
Trigger: CAAGAACTGAGACCCCGGCCAGCGCCCACCCCAGCC...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCAGGCAGAAGGCTGGGGTaGGCGCTGGCCGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAGRRLG*ALAGVS
Trigger: TGAGACCCCGGCCAGCGCCCACCCCAGCCTTCTGCC...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGGCCTGGAGCCCCGCCTaGTCCCTCCTGCGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLAWSPA*SLLRGG
Trigger: TCCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGC...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTACACCCAGGCCAGGTTaGCAGGGTCCATCCCATGAG +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTATPRPG*QGPSHE
Trigger: CTCATGGGATGGACCCTGCCAACCTGGCCTGGGTGT...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAGCACTCGGGAGGCTGTaGCCCAACTGGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGALGRL*PNWHSC
Trigger: GCAGCTGTGCCAGTTGGGCCACAGCCTCCCGAGTGC...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCCGAGACAGGGGCTCTaGGAGCTTCTGCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQPRQGL*ELLPGL
Trigger: AAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGACCCTTGGGGCAGAAGTaGGGAGTTGGGGATAGTGCA +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRPLGQK*GVGDSA
Trigger: TGCACTATCCCCAACTCCCCACTTCTGCCCCAAGGG...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCGGGGAAGAGGGCACTaGCATCTTTGCCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQRGRGH*HLCPRS
Trigger: TGACCGTGGGCAAAGATGTCAGTGCCCTCTTCCCCG...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCGGGGAAGAGGGCACTaGCATCTTTGCCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRRGRGH*HLCPRS
Trigger: TGACCGTGGGCAAAGATGTCAGTGCCCTCTTCCCCG...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTCGGGGAAGAGGGCACTaGCATCTTTGCCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWARGRGH*HLCPRS
Trigger: TGACCGTGGGCAAAGATGTCAGTGCCCTCTTCCCCG...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAAGGTTGCTGCTGGGGTaGGACTCGGCAATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRRLLLG*DSAISE
Trigger: CTCAGAAATTGCCGAGTCTCACCCCAGCAGCAACCT...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGTGGGGCCAGCTTCTTaGGCAGTGTGCCGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAVGPAS*AVCRSS
Trigger: ACTACTACGGCACACTGCTCAAGAAGCTGGCCCCAC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACCAGCTCTGGCTCGGCTaGCAGCAGTGTGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHQLWLG*QQCDQG
Trigger: CCCCTGGTCACACTGCTGTCAGCCGAGCCAGAGCTG...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTCAGCTCTGGCTCGGCTaGCAGCAGTGTGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFQLWLG*QQCDQG
Trigger: CCCCTGGTCACACTGCTGTCAGCCGAGCCAGAGCTG...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGATGGGCGATGTTGGCCTaGGAGGCCAGGCGGATCATG +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGWAMLA*EARRIM
Trigger: CATGATCCGCCTGGCCTCTCAGGCCAACATCGCCCA...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCATGGGCGATGTTGGCCTaGGAGGCCAGGCGGATCATG +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAWAMLA*EARRIM
Trigger: CATGATCCGCCTGGCCTCTCAGGCCAACATCGCCCA...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTACCTGAGTGGCCAAACTaGGGACCTGCTGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALPEWPN*GPAAPA
Trigger: AGCTGGTGCAGCAGGTCCTCAGTTTGGCCACTCAGG...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCCGAGCCCACCGTGCTaGGAGGCAGGGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVPSPPC*EAGRSP
Trigger: TGGAGATCTCCCTGCCTCTCAGCACGGTGGGCTCGG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCCGGGGTCTCAGTTCTTaGGGATGGTCTCGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEARGLSS*GWSRRP
Trigger: AGGCCTACGAGACCATCCTCAAGAACTGAGACCCCG...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCGCCCCAGGCCCTAAGTaGGCAGCTCTCCTGGTACCA +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGAPGPK*AALLVP
Trigger: TGGTACCAGGAGAGCTGCTCACTTAGGGCCTGGGGC...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGGCCCCAGGCCCTAAGTaGGCAGCTCTCCTGGTACCA +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRAPGPK*AALLVP
Trigger: TGGTACCAGGAGAGCTGCTCACTTAGGGCCTGGGGC...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGCTTCTGCCTGGTCTTaGCCATGTGGGTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAASAWS*PCGSAL
Trigger: GAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAATGTATCACAGGCAGTaGCCACCCTTGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRMYHRQ*PPLGQK
Trigger: CTTCTGCCCCAAGGGTGGTCACTGCCTGTGATACAT...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAGCTCAGAGGCGACACTaGGGAATGTATCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRAQRRH*GMYHRQ
Trigger: CTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGC...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGATCTGTCAGACACAACTaGAACCTGGGAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRSVRHN*NLGGQE
Trigger: CTCCTGGCCTCCCAGGTTTCAGTTGTGTCTGACAGA...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCAGCCCACCTGGCGGGTaGAGGTGCCTGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAASPPGG*RCLRSP
Trigger: TGGAGATCTCAGGCACCTTCACCCGCCAGGTGGGCT...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACGCCCATGGTCCGCACTaGCAGGGCTCGGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHAHGPH*QGSDEG
Trigger: CCCCTCATCCGAGCCCTGGCAGTGCGGACCATGGGC...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGGCCACGCACACAGCTaGTGTCTTGCGCACATATGG +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAGHAHS*CLAHIW
Trigger: CCATATGTGCGCAAGACAGCAGCTGTGTGCGTGGCC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGACGCAGGGCCACATACTaGAGCTCTGGCTCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGRRATY*SSGSAD
Trigger: GTCAGCCGAGCCAGAGCTGCAGTATGTGGCCCTGCG...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTACAGCGCTCCGCAGATTaGTCCACCTTGATGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALQRSAD*STLMAQ
Trigger: CTGCGCCATCAAGGTGGAGCAATCTGCGGAGCGCTG...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCACCACCTCCTTGGCTaGCACCGGGTCCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVHHLLG*HRVRGQ
Trigger: CTGTCCACGGACCCGGTGGCAGCCAAGGAGGTGGTG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCCTGCTCCCCAGGAGGTaGTCCAGTAGGGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAALLPRR*SSRGCL
Trigger: GAGACAGCCCCTACTGGAGCACCTCCTGGGGAGCAG...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGTCCACAGCTCCCATCTaGACCGAGGAGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRSTAPI*TEEVAR
Trigger: CCTGGCCACCTCCTCGGTGCAGATGGGAGCTGTGGA...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTATGCTGCTGTTGGAGGTaGCACGAAGTTGGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALCCCWR*HEVGAP
Trigger: GGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCA...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGTCACTCAGGCCACTaGCGATGGGTGCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQGHSGH*RWVLQD
Trigger: ATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACC...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGATGATCCTGACAGGGTaGCCACGCCACTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQMILTG*PRHWSG
Trigger: ACCTGACCAGTGGCGTGGGCACCCTGTCAGGATCAT...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCATGATCCTGACAGGGTaGCCACGCCACTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAMILTG*PRHWSG
Trigger: ACCTGACCAGTGGCGTGGGCACCCTGTCAGGATCAT...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCCCGCCAGCACCCAGATaGCGTTGGTCAGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGPPAPR*RWSASG
Trigger: CCCTGAAGCTGACCAACGGCATCTGGGTGCTGGCGG...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCTGGGACACCTCTGGTaGTCGACACTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQLGHLW*STLQGQ
Trigger: CTGTCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCACCGCCTGGTCCCTCCTaGGAGGAGGAAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAPPGPS*EEEDVL
Trigger: CAGCACATCTTCCTCCTCGCAGGAGGGACCAGGCGG...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTCTAGCTCTGCCCCTCTaGCGGCACCTACAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWALALPL*RHLQLL
Trigger: AAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAG...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCCACCAGCCTGGTGGTTaGAAGTGGGTGGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGHQPGG*KWVVQA
Trigger: GGCCTGCACCACCCACTTGCAACCACCAGGCTGGTG...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCCCAACTGGCACAGCTaGAGGGCACCAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVPNWHS*RAPAWW
Trigger: CCACCAGGCTGGTGCCCTGCAGCTGTGCCAGTTGGG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTCCCAACTGGCACAGCTaGAGGGCACCAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFPNWHS*RAPAWW
Trigger: CCACCAGGCTGGTGCCCTGCAGCTGTGCCAGTTGGG...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGGCTCTGGGAGCTTCTaGCTGGTCTTGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAGSGSF*LVLTMW
Trigger: CCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGACGGCTCGGTTCGGCTTaGCACCAAAATGTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGRLGSA*HQNVRG
Trigger: GCCGCGGACATTTTGGTGCCAAGCCGAACCGAGCCG...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGTGTCTTGCGCACATATaGATCCTCGTCCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRCLAHI*ILVLQA
Trigger: TGCCTGAAGGACGAGGATCCATATGTGCGCAAGACA...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCACGCTCACAGATGCTCTaGGCCTCGCGGTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVARSQML*ASRSSL
Trigger: CAAGGACGACCGCGAGGCCCAGAGCATCTGTGAGCG...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGACACCTGGGCGATGTTaGCCTGAGAGGCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWTPGRC*PERPGG
Trigger: TCCGCCTGGCCTCTCAGGCCAACATCGCCCAGGTGT...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCACAATCCAGATCATaGCAGCCCGGGCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRPQSRS*QPGPQA
Trigger: AGCCTGAGGCCCGGGCTGCCATGATCTGGATTGTGG...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGCTGCCACCGGGTCCGTaGACAGCAGGCGCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGLPPGP*TAGASR
Trigger: TCTACTGGCGCCTGCTGTCCACGGACCCGGTGGCAG...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTCCAACACCACCTCCTTaGCTGCCACCGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFPTPPP*LPPGPW
Trigger: CCACGGACCCGGTGGCAGCCAAGGAGGTGGTGTTGG...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGCCAACACCACCTCCTTaGCTGCCACCGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGPTPPP*LPPGPW
Trigger: CCACGGACCCGGTGGCAGCCAAGGAGGTGGTGTTGG...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTCGAGGCCGTGCGAGGTaGCAGGCTCTTGTGCACGAC +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFRGRAR*QALVHD
Trigger: GTCGTGCACAAGAGCCTGCCACCTCGCACGGCCTCG...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACCCAGCAGGTCGCCCTaGGCGGGGATGACATCTGGC +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAPSRSP*AGMTSG
Trigger: GCCAGATGTCATCCCCGCCCAGGGCGACCTGCTGGG...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGTCAGGCCACTGCCGATaGGTGCTCCAAGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQSGHCR*VLQDWL
Trigger: CAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGA...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGGTGCCCACGCCACTaGTCAGGTCAAAGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPGCPRH*SGQRGH
Trigger: GTGACCTCTTTGACCTGACCAGTGGCGTGGGCACCC...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACTGGTTGGGGCTGAGTaGCGCGTGGACCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRALVGAE*RVDLEG
Trigger: CCCCTCCAGGTCCACGCGCCACTCAGCCCCAACCAG...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCTGGGGTTGCCCGGCTaGATCCGCAGCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLLGLPG*IRSSAS
Trigger: GCTGGCGGAGCTGCGGATCCAGCCGGGCAACCCCAG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCAGGGACAGCGTGCAGCTaGGGTTGCCCGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAGTACS*GCPAGS
Trigger: GGATCCAGCCGGGCAACCCCAGCTGCACGCTGTCCC...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGACAGGCACAGCTTCTGTaGCTGCTCTGGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRQAQLL*LLWLCF
Trigger: GAAACAGAGCCAGAGCAGCCACAGAAGCTGTGCCTG...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCAGTGAGCAGCTCTCCTaGTACCAAGGGGAACCCCTC +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEASEQLS*YQGEPL
Trigger: GAGGGGTTCCCCTTGGTACCAGGAGAGCTGCTCACT...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACGGGTGGTGCAGGCCCTaGGCTCCTCCCAGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHGWCRP*APPSLA
Trigger: AGCTAGGCTGGGAGGAGCCCAGGGCCTGCACCACCC...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCCTGGTGGTTGCAAGTaGGTGGTGCAGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVPGGCK*VVQALG
Trigger: GCCCAGGGCCTGCACCACCCACTTGCAACCACCAGG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTAGGGCACCAGCCTGGTaGTTGCAAGTGGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPRAPAW*LQVGGA
Trigger: TGCACCACCCACTTGCAACCACCAGGCTGGTGCCCT...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTCTGGTCTTGACCATGTaGGTCAGCACTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTALVLTM*VSTREA
Trigger: AGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAG...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGAGACAGGGGCTCTaGGAGCTTCTGCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRPRQGL*ELLPGL
Trigger: AAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGGGCAGTGACCACCCTTaGGGCAGAAGTGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRGSDHP*GRSGEL
Trigger: CAACTCCCCACTTCTGCCCCAAGGGTGGTCACTGCC...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGCAGTGACCACCCTTaGGGCAGAAGTGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPGSDHP*GRSGEL
Trigger: CAACTCCCCACTTCTGCCCCAAGGGTGGTCACTGCC...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAGGAGCCAGACTGCTTTaGGGGCCACATATGATCCTG +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRGARLL*GPHMIL
Trigger: CAGGATCATATGTGGCCCCCAAAGCAGTCTGGCTCC...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCCACCAGCTGGGCGTTaGTGTCGTGGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVPPAGR*CRGAWP
Trigger: TGGCCAAGCTCCACGACATCAACGCCCAGCTGGTGG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACCCACCAGCTGGGCGTTaGTGTCGTGGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHPPAGR*CRGAWP
Trigger: TGGCCAAGCTCCACGACATCAACGCCCAGCTGGTGG...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGAGGTTGCTGCTGGGGTaGGACTCGGCAATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQRLLLG*DSAISE
Trigger: CTCAGAAATTGCCGAGTCTCACCCCAGCAGCAACCT...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGGTGGGGCCAGCTTCTTaGGCAGTGTGCCGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRVGPAS*AVCRSS
Trigger: ACTACTACGGCACACTGCTCAAGAAGCTGGCCCCAC...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTGTGGGGCCAGCTTCTTaGGCAGTGTGCCGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAVGPAS*AVCRSS
Trigger: ACTACTACGGCACACTGCTCAAGAAGCTGGCCCCAC...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCACAGTGTGGGCTCGATaGGGTCCGTCTCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEATVWAR*GPSLQR
Trigger: TCTCTGAAGAGACGGACCTCATCGAGCCCACACTGT...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGACAGTGTGGGCTCGATaGGGTCCGTCTCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQTVWAR*GPSLQR
Trigger: TCTCTGAAGAGACGGACCTCATCGAGCCCACACTGT...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGCAAAGTCGGTCATaGCCTGCAAGGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAWQSRS*PARPCW
Trigger: CCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCA...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGTGGCAAAGTCGGTCATaGCCTGCAAGGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQWQSRS*PARPCW
Trigger: CCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCA...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACTGTCTGGTTGGGGCTaGGTGGCGCGTGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRALSGWG*VARGPG
Trigger: TCCAGGTCCACGCGCCACTCAGCCCCAACCAGACAG...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGATCCTCTTGGCGACAGTaGAGATGTTGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRSSWRQ*RCCCSA
Trigger: TGCAGAGCAGCAACATCTTCACTGTCGCCAAGAGGA...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGCTTCTGCCTGGTCTTaGCCATGTGGGTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPASAWS*PCGSAL
Trigger: GAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGC...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGCTCAGAGGCGACACTaGGGAATGTATCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQAQRRH*GMYHRQ
Trigger: CTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGC...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGTCTGTCAGACACAACTaGAACCTGGGAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQSVRHN*NLGGQE
Trigger: CTCCTGGCCTCCCAGGTTTCAGTTGTGTCTGACAGA...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGCGGGTGAAGGTGCCTaGGATCTCCAGCCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFAGEGA*DLQPLS
Trigger: GCTAAGGGGCTGGAGATCTCAGGCACCTTCACCCGC...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGTCTTGTCAACGCGGATaGAGCCCATGGTCCGCACTG +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQSCQRG*SPWSAL
Trigger: CAGTGCGGACCATGGGCTGCATCCGCGTTGACAAGA...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCGCAGGGCCACATACTaGAGCTCTGGCTCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVRRATY*SSGSAD
Trigger: GTCAGCCGAGCCAGAGCTGCAGTATGTGGCCCTGCG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCCAGCGCTCCGCAGATTaGTCCACCTTGATGGCGCAG +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAQRSAD*STLMAQ
Trigger: CTGCGCCATCAAGGTGGAGCAATCTGCGGAGCGCTG...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCAAACTGAGGACCTGCTaGACCAGCTCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAKLRTC*TSSWVS
Trigger: AGAGACCCAGGAGCTGGTGCAGCAGGTCCTCAGTTT...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGATCTCACTCGAGGCCGTaGGAGGTGGCAGGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGSHSRP*EVAGSC
Trigger: ACAAGAGCCTGCCACCTCGCACGGCCTCGAGTGAGA...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCTCTCACTCGAGGCCGTaGGAGGTGGCAGGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAASHSRP*EVAGSC
Trigger: ACAAGAGCCTGCCACCTCGCACGGCCTCGAGTGAGA...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGCTGCTCCCCAGGAGGTaGTCCAGTAGGGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGLLPRR*SSRGCL
Trigger: GAGACAGCCCCTACTGGAGCACCTCCTGGGGAGCAG...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGTGCTGCTGTTGGAGGTaGCACGAAGTTGGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRCCCWR*HEVGAP
Trigger: GGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCA...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCTGCTGTTGGAGGTaGCACGAAGTTGGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGCCCWR*HEVGAP
Trigger: GGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCA...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAAAGATTGGCTGGTACTaGTGCTGTTGGAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRKIGWY*CCWRCH
Trigger: GTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTT...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGGTCACTCAGGCCACTaGCGATGGGTGCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQGHSGH*RWVLQD
Trigger: ATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACC...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGGGTCACTCAGGCCACTaGCGATGGGTGCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRGHSGH*RWVLQD
Trigger: ATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACC...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTTGCTGCTCTGCAGCTTaGTGCTCGCAGCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWACCSAA*CSQPLH
Trigger: ATGCAGAGGCTGCGAGCAGCAAGCTGCAGAGCAGCA...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTAAGATGTTGCTGCTCTaGAGCTTGCTGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAKMLLL*SLLLAA
Trigger: GGCTGCGAGCAGCAAGCTGCAGAGCAGCAACATCTT...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACCCGCCAGCACCCAGATaGCGTTGGTCAGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHPPAPR*RWSASG
Trigger: CCCTGAAGCTGACCAACGGCATCTGGGTGCTGGCGG...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTCTGGGACACCTCTGGTaGTCGACACTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPLGHLW*STLQGQ
Trigger: CTGTCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAG...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCTGGGACACCTCTGGTaGTCGACACTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQLGHLW*STLQGQ
Trigger: CTGTCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAG...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGGATCGGGTGGGTTCTaGCATCAGGACCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGGSGGF*HQDQGA
Trigger: GGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCC...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCACTAGCTCTGCCCCTCTaGCGGCACCTACAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVALALPL*RHLQLL
Trigger: AAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAG...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTGGCTCTGGGAGCTTCTaGCTGGTCTTGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAGSGSF*LVLTMW
Trigger: CCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCC...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGGCTCTGGGAGCTTCTaGCTGGTCTTGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQGSGSF*LVLTMW
Trigger: CCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCC...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCAGGCACTTCCGGAGTaGCTCGCACAGGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQQALPE*LAQVLC
Trigger: ACAGAGTACCTGTGCGAGCCACTCCGGAAGTGCCTG...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTACACCTGGGCGATGTTaGCCTGAGAGGCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFTPGRC*PERPGG
Trigger: TCCGCCTGGCCTCTCAGGCCAACATCGCCCAGGTGT...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCCCACAATCCAGATCATaGCAGCCCGGGCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAPQSRS*QPGPQA
Trigger: AGCCTGAGGCCCGGGCTGCCATGATCTGGATTGTGG...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGATGCTGCACCAGCTCCTaGGTCTCTGTTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRCCTSS*VSVGFF
Trigger: AAAGAAGCCAACAGAGACCCAGGAGCTGGTGCAGCA...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACCAACACCACCTCCTTaGCTGCCACCGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAPTPPP*LPPGPW
Trigger: CCACGGACCCGGTGGCAGCCAAGGAGGTGGTGTTGG...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCCCAGCAGGTCGCCCTaGGCGGGGATGACATCTGGC +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLPSRSP*AGMTSG
Trigger: GCCAGATGTCATCCCCGCCCAGGGCGACCTGCTGGG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTGAGGTGCCACGAAGTTaGTGCCCCCAATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAEVPRS*CPQSGC
Trigger: ACAGCCTGATTGGGGGCACCAACTTCGTGGCACCTC...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAGCAGGTCCATGGAGATaGAGCCCACTGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGAGPWR*SPLLWG
Trigger: CCCCCAAAGCAGTGGGCTCCATCTCCATGGACCTGC...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317368.11
CDS-3UTR CCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGAGATCTCCACTGTCTaGTTGGGGCTGAGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAEISTV*LGLSGA
Trigger: CGCGCCACTCAGCCCCAACCAGACAGTGGAGATCTC...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGCCTGGTACACGTGCTaGGACACCTCTGGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAAWYTC*DTSGAR
Trigger: TCGAGCACCAGAGGTGTCCCAGCACGTGTACCAGGC...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGACACCCAGGCCAGGTTaGCAGGGTCCATCCCATGAG +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRTPRPG*QGPSHE
Trigger: CTCATGGGATGGACCCTGCCAACCTGGCCTGGGTGT...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAAGGGCACCAGCCTGGTaGTTGCAAGTGGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVARAPAW*LQVGGA
Trigger: TGCACCACCCACTTGCAACCACCAGGCTGGTGCCCT...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCAGGGCACCAGCCTGGTaGTTGCAAGTGGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGRAPAW*LQVGGA
Trigger: TGCACCACCCACTTGCAACCACCAGGCTGGTGCCCT...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGGCACTCGGGAGGCTGTaGCCCAACTGGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLALGRL*PNWHSC
Trigger: GCAGCTGTGCCAGTTGGGCCACAGCCTCCCGAGTGC...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGACCGAGACAGGGGCTCTaGGAGCTTCTGCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGPRQGL*ELLPGL
Trigger: AAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCCCGAGACAGGGGCTCTaGGAGCTTCTGCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGPRQGL*ELLPGL
Trigger: AAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGGGCAGTGACCACCCTTaGGGCAGAAGTGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWGSDHP*GRSGEL
Trigger: CAACTCCCCACTTCTGCCCCAAGGGTGGTCACTGCC...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCGGCAGTGACCACCCTTaGGGCAGAAGTGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGGSDHP*GRSGEL
Trigger: CAACTCCCCACTTCTGCCCCAAGGGTGGTCACTGCC...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGACACAACTGAAACCTaGGAGGCCAGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPDTTET*EARRRA
Trigger: TGCCCTCCTCCTGGCCTCCCAGGTTTCAGTTGTGTC...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGACACAACTGAAACCTaGGAGGCCAGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQDTTET*EARRRA
Trigger: TGCCCTCCTCCTGGCCTCCCAGGTTTCAGTTGTGTC...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTGAGGTGCCACGAAGTTaGTGCCCCCAATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAEVPRS*CPQSLQ
Trigger: CTGAAGGGATTGGGGGCACCAACTTCGTGGCACCTC...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACGAGATGGAGCCCACCTaGCGGGTGAAGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHEMEPT*RVKVPE
Trigger: CTCAGGCACCTTCACCCGCCAGGTGGGCTCCATCTC...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAAGGCCAGGCGGATCATaGTGTCCAGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVARPGGS*CPASPA
Trigger: AGCTGGAGAAGCTGGACATCATGATCCGCCTGGCCT...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGAGGCCAGGCGGATCATaGTGTCCAGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRRPGGS*CPASPA
Trigger: AGCTGGAGAAGCTGGACATCATGATCCGCCTGGCCT...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTACAGTGTGGGCTCGATaGGGTCCGTCTCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWATVWAR*GPSLQR
Trigger: TCTCTGAAGAGACGGACCTCATCGAGCCCACACTGT...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTGGCCGAGGTCCAGGTTaGGGAGGTCACCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLGRGPG*GGHPAG
Trigger: ACCTGCTGGGTGACCTCCTCAACCTGGACCTCGGCC...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGTGGCAAAGTCGGTCATaGCCTGCAAGGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRWQSRS*PARPCW
Trigger: CCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCA...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCACGGGGTCTCAGTTCTTaGGGATGGTCTCGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVARGLSS*GWSRRP
Trigger: AGGCCTACGAGACCATCCTCAAGAACTGAGACCCCG...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAGCTTCTGCCTGGTCTTaGCCATGTGGGTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGASAWS*PCGSAL
Trigger: GAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGC...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTATGTATCACAGGCAGTaGCCACCCTTGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPMYHRQ*PPLGQK
Trigger: CTTCTGCCCCAAGGGTGGTCACTGCCTGTGATACAT...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTAGCTCAGAGGCGACACTaGGGAATGTATCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALAQRRH*GMYHRQ
Trigger: CTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGC...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGCTCAGAGGCGACACTaGGGAATGTATCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPAQRRH*GMYHRQ
Trigger: CTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGC...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCATCTTGTCAACGCGGATaGAGCCCATGGTCCGCACTG +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVASCQRG*SPWSAL
Trigger: CAGTGCGGACCATGGGCTGCATCCGCGTTGACAAGA...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGCTCCAGCAGCTCATCTaGGTTGTCGATCCGTTCCGC +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRLQQLI*VVDPFR
Trigger: GCGGAACGGATCGACAACGCAGATGAGCTGCTGGAG...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCTCCAGCAGCTCATCTaGGTTGTCGATCCGTTCCGC +
Preference number: 4 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWLQQLI*VVDPFR
Trigger: GCGGAACGGATCGACAACGCAGATGAGCTGCTGGAG...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGGCAGCTGGACCTGTGTaGTCTCGTCATGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRAAGPV*SRHGSP
Trigger: AGGGCTTCCATGACGAGAGCACACAGGTCCAGCTGC...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACTCCACAGCTCCCATCTaGACCGAGGAGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHSTAPI*TEEVAR
Trigger: CCTGGCCACCTCCTCGGTGCAGATGGGAGCTGTGGA...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTAGTGCCACGAAGTTGGTaGCCCCAATCAGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALVPRSW*PQSGCQ
Trigger: TTGACAGCCTGATTGGGGGCACCAACTTCGTGGCAC...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTGTGCCACGAAGTTGGTaGCCCCAATCAGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAVPRSW*PQSGCQ
Trigger: TTGACAGCCTGATTGGGGGCACCAACTTCGTGGCAC...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGTGCTGCTGTTGGAGGTaGCACGAAGTTGGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVCCCWR*HEVGAP
Trigger: GGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCA...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGCCTTGTTGGTCAGCTaGAGGTCCATGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPALLVS*RSMEME
Trigger: CTCCATCTCCATGGACCTGCAGCTGACCAACAAGGC...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGATGCTGCTCTGCAGCTTaGTGCTCGCAGCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGCCSAA*CSQPLH
Trigger: ATGCAGAGGCTGCGAGCAGCAAGCTGCAGAGCAGCA...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGCCGCCTGGTCCCTCCTaGGAGGAGGAAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLPPGPS*EEEDVL
Trigger: CAGCACATCTTCCTCCTCGCAGGAGGGACCAGGCGG...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCCCAGAGCACGGGAGTaGACTGCGCTCTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLPRARE*TALSPQ
Trigger: CTGGGGTGAGAGCGCAGTGCACTCCCGTGCTCTGGG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACGGCTCGGTTCGGCTTaGCACCAAAATGTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRARLGSA*HQNVRG
Trigger: GCCGCGGACATTTTGGTGCCAAGCCGAACCGAGCCG...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACGCTCACAGATGCTCTaGGCCTCGCGGTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRARSQML*ASRSSL
Trigger: CAAGGACGACCGCGAGGCCCAGAGCATCTGTGAGCG...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTTGTGTGCTCTCGTCATaGAAGCCCTCGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPCVLSS*KPSRKL
Trigger: GAGCTTCCTCGAGGGCTTCCATGACGAGAGCACACA...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGTCAGCAGCTGCAGCTaGACCTGTGTGCTCTCGTCA +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAVSSCS*TCVLSS
Trigger: TGACGAGAGCACACAGGTCCAGCTGCAGCTGCTGAC...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGGGCCGCTCACTaGGGGGCCGAGGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQGWAAH*GAEVQV
Trigger: AACCTGGACCTCGGCCCCCCAGTGAGCGGCCCACCC...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGAGGTGCCACGAAGTTaGTGCCCCCAATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAEVPRS*CPQSGC
Trigger: ACAGCCTGATTGGGGGCACCAACTTCGTGGCACCTC...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTTGGTACTGCTGCTGTTaGAGGTGCCACGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAWYCCC*RCHEVG
Trigger: ACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCA...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGTACTGCTGCTGTTaGAGGTGCCACGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAWYCCC*RCHEVG
Trigger: ACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCA...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTTGCTCCAAGATTGGCTaGTACTGCTGCTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTACSKIG*YCCCWR
Trigger: CCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCA...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCTCAGGCCACTGCCGATaGGTGCTCCAAGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAASGHCR*VLQDWL
Trigger: CAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGA...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGGGTGCCCACGCCACTaGTCAGGTCAAAGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFGCPRH*SGQRGH
Trigger: GTGACCTCTTTGACCTGACCAGTGGCGTGGGCACCC...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGACTGTTGCGGTTGAACTaGATGGCAAAGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRLLRLN*MAKSVM
Trigger: CATGACCGACTTTGCCATCCAGTTCAACCGCAACAG...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTGGGCAGTCTCTGATCTaGAACTGGGCCTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAGQSLI*NWASFS
Trigger: TGAGAATGAGGCCCAGTTCCAGATCAGAGACTGCCC...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAGTGCTGGGACACCTCTaGTGCTCGACACTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGVLGHL*CSTLQG
Trigger: TCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAGCAC...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAAGTGAGCAGCTCTCCTaGTACCAAGGGGAACCCCTC +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVASEQLS*YQGEPL
Trigger: GAGGGGTTCCCCTTGGTACCAGGAGAGCTGCTCACT...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGAGGCTGTGGCCCAACTaGCACAGCTGCAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLRLWPN*HSCRAP
Trigger: TGGTGCCCTGCAGCTGTGCCAGTTGGGCCACAGCCT...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACAGGCTGTGGCCCAACTaGCACAGCTGCAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHRLWPN*HSCRAP
Trigger: TGGTGCCCTGCAGCTGTGCCAGTTGGGCCACAGCCT...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTGCACTCGGGAGGCTGTaGCCCAACTGGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLALGRL*PNWHSC
Trigger: GCAGCTGTGCCAGTTGGGCCACAGCCTCCCGAGTGC...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGGAGATGGAGCCCACCTaGCGGGTGAAGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLEMEPT*RVKVPE
Trigger: CTCAGGCACCTTCACCCGCCAGGTGGGCTCCATCTC...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGCGGGGAAGAGGGCACTaGCATCTTTGCCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLRGRGH*HLCPRS
Trigger: TGACCGTGGGCAAAGATGTCAGTGCCCTCTTCCCCG...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGACGCACAGGTACTCTGTaGTCTTGTCAACGCGGATGC +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGRTGTL*SCQRGC
Trigger: GCATCCGCGTTGACAAGATCACAGAGTACCTGTGCG...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCGCACAGGTACTCTGTaGTCTTGTCAACGCGGATGC +
Preference number: 4 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWRTGTL*SCQRGC
Trigger: GCATCCGCGTTGACAAGATCACAGAGTACCTGTGCG...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCCGCACAGGTACTCTGTaGTCTTGTCAACGCGGATGC +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGRTGTL*SCQRGC
Trigger: GCATCCGCGTTGACAAGATCACAGAGTACCTGTGCG...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCCACCAGCTGGGCGTTaGTGTCGTGGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLPPAGR*CRGAWP
Trigger: TGGCCAAGCTCCACGACATCAACGCCCAGCTGGTGG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACGTGGGGCCAGCTTCTTaGGCAGTGTGCCGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHVGPAS*AVCRSS
Trigger: ACTACTACGGCACACTGCTCAAGAAGCTGGCCCCAC...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGAGGCCAGGCGGATCATaGTGTCCAGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGRPGGS*CPASPA
Trigger: AGCTGGAGAAGCTGGACATCATGATCCGCCTGGCCT...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACAGGCCAGGCGGATCATaGTGTCCAGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHRPGGS*CPASPA
Trigger: AGCTGGAGAAGCTGGACATCATGATCCGCCTGGCCT...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGCCTGAGTGGCCAAACTaGGGACCTGCTGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLPEWPN*GPAAPA
Trigger: AGCTGGTGCAGCAGGTCCTCAGTTTGGCCACTCAGG...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACCTGAGTGGCCAAACTaGGGACCTGCTGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAPEWPN*GPAAPA
Trigger: AGCTGGTGCAGCAGGTCCTCAGTTTGGCCACTCAGG...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGTGGCAAAGTCGGTCATaGCCTGCAAGGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRWQSRS*PARPCW
Trigger: CCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCA...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCAAAGCTGTTGCGGTTaGACTGGATGGCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRQSCCG*TGWQSR
Trigger: CCGACTTTGCCATCCAGTTCAACCGCAACAGCTTTG...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCAAAGCTGTTGCGGTTaGACTGGATGGCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQQSCCG*TGWQSR
Trigger: CCGACTTTGCCATCCAGTTCAACCGCAACAGCTTTG...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTATCCTCTTGGCGACAGTaGAGATGTTGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALSSWRQ*RCCCSA
Trigger: TGCAGAGCAGCAACATCTTCACTGTCGCCAAGAGGA...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCATGTATCACAGGCAGTaGCCACCCTTGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGMYHRQ*PPLGQK
Trigger: CTTCTGCCCCAAGGGTGGTCACTGCCTGTGATACAT...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGGCAGCTTTCAATCCTaGCATTCGGTGGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQGSFQS*HSVEGK
Trigger: TTTCCCCTCCACCGAATGTCAGGATTGAAAGCTGCC...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGCCCATGGTCCGCACTaGCAGGGCTCGGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQAHGPH*QGSDEG
Trigger: CCCCTCATCCGAGCCCTGGCAGTGCGGACCATGGGC...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGGCCACGCACACAGCTaGTGTCTTGCGCACATATGG +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFGHAHS*CLAHIW
Trigger: CCATATGTGCGCAAGACAGCAGCTGTGTGCGTGGCC...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACAGCGCTCCGCAGATTaGTCCACCTTGATGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAQRSAD*STLMAQ
Trigger: CTGCGCCATCAAGGTGGAGCAATCTGCGGAGCGCTG...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCTCCAGCAGCTCATCTaGGTTGTCGATCCGTTCCGC +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVLQQLI*VVDPFR
Trigger: GCGGAACGGATCGACAACGCAGATGAGCTGCTGGAG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGCAGCTGGACCTGTGTaGTCTCGTCATGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFAAGPV*SRHGSP
Trigger: AGGGCTTCCATGACGAGAGCACACAGGTCCAGCTGC...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCAAACTGAGGACCTGCTaGACCAGCTCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGKLRTC*TSSWVS
Trigger: AGAGACCCAGGAGCTGGTGCAGCAGGTCCTCAGTTT...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCATCTCACTCGAGGCCGTaGGAGGTGGCAGGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRASHSRP*EVAGSC
Trigger: ACAAGAGCCTGCCACCTCGCACGGCCTCGAGTGAGA...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCTGCTCCCCAGGAGGTaGTCCAGTAGGGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLLLPRR*SSRGCL
Trigger: GAGACAGCCCCTACTGGAGCACCTCCTGGGGAGCAG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTTCCACAGCTCCCATCTaGACCGAGGAGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLSTAPI*TEEVAR
Trigger: CCTGGCCACCTCCTCGGTGCAGATGGGAGCTGTGGA...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTAAGATTGGCTGGTACTaGTGCTGTTGGAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAKIGWY*CCWRCH
Trigger: GTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTT...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACGCCACTGCCGATGGGTaGTCCAAGATTGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHATADG*SKIGWY
Trigger: GTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGC...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCCACTGCCGATGGGTaGTCCAAGATTGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVATADG*SKIGWY
Trigger: GTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGC...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGCCACTGCCGATGGGTaGTCCAAGATTGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFATADG*SKIGWY
Trigger: GTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGC...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTATGATCCTGACAGGGTaGCCACGCCACTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFMILTG*PRHWSG
Trigger: ACCTGACCAGTGGCGTGGGCACCCTGTCAGGATCAT...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTAAGTCGGTCATGACCTaGAAGGCCTTGTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAKSVMT*KALLVS
Trigger: GCTGACCAACAAGGCCTTGCAGGTCATGACCGACTT...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACCTAGCTCTGCCCCTCTaGCGGCACCTACAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHLALPL*RHLQLL
Trigger: AAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAG...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGTGCCACGAAGTTGGTaGCCCCAATCCCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGVPRSW*PQSLQA
Trigger: AGCCTGAAGGGATTGGGGGCACCAACTTCGTGGCAC...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS-3UTR GCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCAACAGCTCTAAGTCCGTaGAGCTGGGGTTGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRATALSP*SWGCPA
Trigger: AGCCGGGCAACCCCAGCTGCACGGACTTAGAGCTGT...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS-3UTR CCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGCAGGCACTTCCGGAGTaGCTCGCACAGGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGQALPE*LAQVLC
Trigger: ACAGAGTACCTGTGCGAGCCACTCCGGAAGTGCCTG...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCAGGCACTTCCGGAGTaGCTCGCACAGGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVQALPE*LAQVLC
Trigger: ACAGAGTACCTGTGCGAGCCACTCCGGAAGTGCCTG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGACTTGTTGATGGACTGTaGGTTCAGATCGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRLVDGL*VQIEQV
Trigger: AACCTGCTCGATCTGAACCCACAGTCCATCAACAAG...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGTCAGCAGCTGCAGCTaGACCTGTGTGCTCTCGTCA +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVVSSCS*TCVLSS
Trigger: TGACGAGAGCACACAGGTCCAGCTGCAGCTGCTGAC...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGTCAGCAGCTGCAGCTaGACCTGTGTGCTCTCGTCA +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGVSSCS*TCVLSS
Trigger: TGACGAGAGCACACAGGTCCAGCTGCAGCTGCTGAC...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTCTCTTCAGAGATGAGTaGCTTCTCAGCCAACACCAC +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTALFRDE*LLSQHH
Trigger: GTGGTGTTGGCTGAGAAGCCACTCATCTCTGAAGAG...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTTGCTCCAAGATTGGCTaGTACTGCTGCTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWACSKIG*YCCCWR
Trigger: CCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCA...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTTCAGGCCACTGCCGATaGGTGCTCCAAGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFSGHCR*VLQDWL
Trigger: CAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGA...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCAGAGATCTCCACTGTCTaGTTGGGGCTGAGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAEISTV*LGLSGA
Trigger: CGCGCCACTCAGCCCCAACCAGACAGTGGAGATCTC...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACGTGCTGGGACACCTCTaGTGCTCGACACTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHVLGHL*CSTLQG
Trigger: TCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAGCAC...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGTGCTGGGACACCTCTaGTGCTCGACACTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGVLGHL*CSTLQG
Trigger: TCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAGCAC...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACGCCTGGTACACGTGCTaGGACACCTCTGGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHAWYTC*DTSGAR
Trigger: TCGAGCACCAGAGGTGTCCCAGCACGTGTACCAGGC...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGAGGGAGCCCACTGAGTaGCCTGGAGCCCCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQREPTE*PGAPPG
Trigger: ACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCT...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGAGTGAGCAGCTCTCCTaGTACCAAGGGGAACCCCTC +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGSEQLS*YQGEPL
Trigger: GAGGGGTTCCCCTTGGTACCAGGAGAGCTGCTCACT...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACAGGGCACCAGCCTGGTaGTTGCAAGTGGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHRAPAW*LQVGGA
Trigger: TGCACCACCCACTTGCAACCACCAGGCTGGTGCCCT...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCTGGTCTTGACCATGTaGGTCAGCACTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVLVLTM*VSTREA
Trigger: AGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTCTGGTCTTGACCATGTaGGTCAGCACTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFLVLTM*VSTREA
Trigger: AGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAG...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCCCTTGGGGCAGAAGTaGGGAGTTGGGGATAGTGCA +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVPLGQK*GVGDSA
Trigger: TGCACTATCCCCAACTCCCCACTTCTGCCCCAAGGG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTCCCTTGGGGCAGAAGTaGGGAGTTGGGGATAGTGCA +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFPLGQK*GVGDSA
Trigger: TGCACTATCCCCAACTCCCCACTTCTGCCCCAAGGG...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGACACAACTGAAACCTaGGAGGCCAGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGDTTET*EARRRA
Trigger: TGCCCTCCTCCTGGCCTCCCAGGTTTCAGTTGTGTC...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCACTTAGCCTTCATGGCTaGGAGCCAGACTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVALSLHG*EPDCFG
Trigger: CCCAAAGCAGTCTGGCTCCCAGCCATGAAGGCTAAG...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCTTAGCCTTCATGGCTaGGAGCCAGACTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWLSLHG*EPDCFG
Trigger: CCCAAAGCAGTCTGGCTCCCAGCCATGAAGGCTAAG...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTGAGATGGAGCCCACCTaGCGGGTGAAGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLEMEPT*RVKVPE
Trigger: CTCAGGCACCTTCACCCGCCAGGTGGGCTCCATCTC...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTGTGGGTACAAGGTGCTaGAGTAGAAGACATCGATGT +
Preference number: 4 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAVGTRC*SRRHRC
Trigger: ACATCGATGTCTTCTACTTCAGCACCTTGTACCCAC...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGTGGGTACAAGGTGCTaGAGTAGAAGACATCGATGT +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAVGTRC*SRRHRC
Trigger: ACATCGATGTCTTCTACTTCAGCACCTTGTACCCAC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGTCCTCTTGGCGACAGTaGAGATGTTGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRSSWRQ*RCCCSA
Trigger: TGCAGAGCAGCAACATCTTCACTGTCGCCAAGAGGA...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCTCCTCTTGGCGACAGTaGAGATGTTGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAASSWRQ*RCCCSA
Trigger: TGCAGAGCAGCAACATCTTCACTGTCGCCAAGAGGA...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGGCTTCTGCCTGGTCTTaGCCATGTGGGTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLASAWS*PCGSAL
Trigger: GAGTGCTGACCCACATGGTCAAGACCAGGCAGAAGC...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCGGCAGCTTTCAATCCTaGCATTCGGTGGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGGSFQS*HSVEGK
Trigger: TTTCCCCTCCACCGAATGTCAGGATTGAAAGCTGCC...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGTCCAGGTTGTCCGTCTaGATGCAGTTGACCACATCG +
Preference number: 4 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWSRLSV*MQLTTS
Trigger: CGATGTGGTCAACTGCATGCAGACGGACAACCTGGA...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTCCAGGTTGTCCGTCTaGATGCAGTTGACCACATCG +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGSRLSV*MQLTTS
Trigger: CGATGTGGTCAACTGCATGCAGACGGACAACCTGGA...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCATCTTGTCAACGCGGATaGAGCCCATGGTCCGCACTG +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRASCQRG*SPWSAL
Trigger: CAGTGCGGACCATGGGCTGCATCCGCGTTGACAAGA...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACTCTTGTCAACGCGGATaGAGCCCATGGTCCGCACTG +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHSCQRG*SPWSAL
Trigger: CAGTGCGGACCATGGGCTGCATCCGCGTTGACAAGA...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGAAACTGAGGACCTGCTaGACCAGCTCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGKLRTC*TSSWVS
Trigger: AGAGACCCAGGAGCTGGTGCAGCAGGTCCTCAGTTT...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCAAGATTGGCTGGTACTaGTGCTGTTGGAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGKIGWY*CCWRCH
Trigger: GTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTT...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACGGTCACTCAGGCCACTaGCGATGGGTGCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHGHSGH*RWVLQD
Trigger: ATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACC...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAAAGTCGGTCATGACCTaGAAGGCCTTGTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAKSVMT*KALLVS
Trigger: GCTGACCAACAAGGCCTTGCAGGTCATGACCGACTT...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGAAGTCGGTCATGACCTaGAAGGCCTTGTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWKSVMT*KALLVS
Trigger: GCTGACCAACAAGGCCTTGCAGGTCATGACCGACTT...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGTGCTGCTCTGCAGCTTaGTGCTCGCAGCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLCCSAA*CSQPLH
Trigger: ATGCAGAGGCTGCGAGCAGCAAGCTGCAGAGCAGCA...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACTGCTGCTCTGCAGCTTaGTGCTCGCAGCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHCCSAA*CSQPLH
Trigger: ATGCAGAGGCTGCGAGCAGCAAGCTGCAGAGCAGCA...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACAAGATGTTGCTGCTCTaGAGCTTGCTGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHKMLLL*SLLLAA
Trigger: GGCTGCGAGCAGCAAGCTGCAGAGCAGCAACATCTT...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGCTGGGACACCTCTGGTaGTCGACACTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLLGHLW*STLQGQ
Trigger: CTGTCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAG...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGAGGAGGAAGATGTGCTaGCCCCGAGGGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQRRKMC*PRGASS
Trigger: CGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCT...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGCCCAGAGCACGGGAGTaGACTGCGCTCTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQPRARE*TALSPQ
Trigger: CTGGGGTGAGAGCGCAGTGCACTCCCGTGCTCTGGG...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGAAAAGTGTCCGTGATTaGCAAAAGCCGAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRKSVRD*QKPNLS
Trigger: AGAAAGATTCGGCTTTTGGCAATCACGGACACTTTT...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACTGTGTGCTCTCGTCATaGAAGCCCTCGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHCVLSS*KPSRKL
Trigger: GAGCTTCCTCGAGGGCTTCCATGACGAGAGCACACA...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGTGCTGCACCAGCTCCTaGGTCTCTGTTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRCCTSS*VSVGFF
Trigger: AAAGAAGCCAACAGAGACCCAGGAGCTGGTGCAGCA...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTACTCTTCAGAGATGAGTaGCTTCTCAGCCAACACCAC +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALLFRDE*LLSQHH
Trigger: GTGGTGTTGGCTGAGAAGCCACTCATCTCTGAAGAG...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCTCTTCAGAGATGAGTaGCTTCTCAGCCAACACCAC +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRLFRDE*LLSQHH
Trigger: GTGGTGTTGGCTGAGAAGCCACTCATCTCTGAAGAG...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACGAGGTGCCACGAAGTTaGTGCCCCCAATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHEVPRS*CPQSGC
Trigger: ACAGCCTGATTGGGGGCACCAACTTCGTGGCACCTC...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGTGGTACTGCTGCTGTTaGAGGTGCCACGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRWYCCC*RCHEVG
Trigger: ACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCA...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACTTCTTCACGGCCACCTaGAGGTTGTTCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHFFTAT*RLFRGS
Trigger: GGAGCCTCTGAACAACCTCCAGGTGGCCGTGAAGAA...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTTTCTTCACGGCCACCTaGAGGTTGTTCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFFFTAT*RLFRGS
Trigger: GGAGCCTCTGAACAACCTCCAGGTGGCCGTGAAGAA...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGGGGCAGTCTCTGATCTaGAACTGGGCCTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWGQSLI*NWASFS
Trigger: TGAGAATGAGGCCCAGTTCCAGATCAGAGACTGCCC...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACAGTGAGCAGCTCTCCTaGTACCAAGGGGAACCCCTC +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHSEQLS*YQGEPL
Trigger: GAGGGGTTCCCCTTGGTACCAGGAGAGCTGCTCACT...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGGAGCCAGACTGCTTTaGGGGCCACATATGATCCTG +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGGARLL*GPHMIL
Trigger: CAGGATCATATGTGGCCCCCAAAGCAGTCTGGCTCC...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGCGCACAGGTACTCTGTaGTCTTGTCAACGCGGATGC +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLRTGTL*SCQRGC
Trigger: GCATCCGCGTTGACAAGATCACAGAGTACCTGTGCG...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACAGGTTGCTGCTGGGGTaGGACTCGGCAATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHRLLLG*DSAISE
Trigger: CTCAGAAATTGCCGAGTCTCACCCCAGCAGCAACCT...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGAGGTTGCTGCTGGGGTaGGACTCGGCAATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLRLLLG*DSAISE
Trigger: CTCAGAAATTGCCGAGTCTCACCCCAGCAGCAACCT...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACACAGTGTGGGCTCGATaGGGTCCGTCTCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHTVWAR*GPSLQR
Trigger: TCTCTGAAGAGACGGACCTCATCGAGCCCACACTGT...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTCAAAGCTGTTGCGGTTaGACTGGATGGCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFQSCCG*TGWQSR
Trigger: CCGACTTTGCCATCCAGTTCAACCGCAACAGCTTTG...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCGGGGTCTCAGTTCTTaGGGATGGTCTCGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLRGLSS*GWSRRP
Trigger: AGGCCTACGAGACCATCCTCAAGAACTGAGACCCCG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGCGGGTGAAGGTGCCTaGGATCTCCAGCCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQAGEGA*DLQPLS
Trigger: GCTAAGGGGCTGGAGATCTCAGGCACCTTCACCCGC...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCAACACCTTCATCTCATaGTTCAGGATCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEANTFIS*FRISGL
Trigger: AAGGCCTGAGATCCTGAAGCATGAGATGAAGGTGTT...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGAACACCTTCATCTCATaGTTCAGGATCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQNTFIS*FRISGL
Trigger: AAGGCCTGAGATCCTGAAGCATGAGATGAAGGTGTT...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACGTGCCACGAAGTTGGTaGCCCCAATCAGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHVPRSW*PQSGCQ
Trigger: TTGACAGCCTGATTGGGGGCACCAACTTCGTGGCAC...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGATTGGCTGGTACTGCTaGTGTTGGAGGTGCCACGAA +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGIGWYC*CWRCHE
Trigger: TTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAAT...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTATTGGCTGGTACTGCTaGTGTTGGAGGTGCCACGAA +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFIGWYC*CWRCHE
Trigger: TTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAAT...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGATTGGCTGGTACTGCTaGTGTTGGAGGTGCCACGAA +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVIGWYC*CWRCHE
Trigger: TTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAAT...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTAAGATTGGCTGGTACTaGTGCTGTTGGAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFKIGWY*CCWRCH
Trigger: GTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTT...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACGCCTTGTTGGTCAGCTaGAGGTCCATGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHALLVS*RSMEME
Trigger: CTCCATCTCCATGGACCTGCAGCTGACCAACAAGGC...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCAGCCTTGTTGGTCAGCTaGAGGTCCATGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAALLVS*RSMEME
Trigger: CTCCATCTCCATGGACCTGCAGCTGACCAACAAGGC...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGAAGTCGGTCATGACCTaGAAGGCCTTGTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVKSVMT*KALLVS
Trigger: GCTGACCAACAAGGCCTTGCAGGTCATGACCGACTT...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCAGGCACTTCCGGAGTaGCTCGCACAGGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLQALPE*LAQVLC
Trigger: ACAGAGTACCTGTGCGAGCCACTCCGGAAGTGCCTG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGTCTTGCGCACATATaGATCCTCGTCCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGCLAHI*ILVLQA
Trigger: TGCCTGAAGGACGAGGATCCATATGTGCGCAAGACA...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAAAGAGTTTCACAATaGCTGTCAGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQERVSQ*LSAAAA
Trigger: AGCTGCAGCTGCTGACAGCCATTGTGAAACTCTTTC...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTTGCTGCACCAGCTCCTaGGTCTCTGTTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFCCTSS*VSVGFF
Trigger: AAAGAAGCCAACAGAGACCCAGGAGCTGGTGCAGCA...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCCTCTTCAGAGATGAGTaGCTTCTCAGCCAACACCAC +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAALFRDE*LLSQHH
Trigger: GTGGTGTTGGCTGAGAAGCCACTCATCTCTGAAGAG...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGACTGTTGCGGTTGAACTaGATGGCAAAGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGLLRLN*MAKSVM
Trigger: CATGACCGACTTTGCCATCCAGTTCAACCGCAACAG...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCATTCTTCACGGCCACCTaGAGGTTGTTCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAFFTAT*RLFRGS
Trigger: GGAGCCTCTGAACAACCTCCAGGTGGCCGTGAAGAA...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACTTCTTCACGGCCACCTaGAGGTTGTTCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHFFTAT*RLFRGS
Trigger: GGAGCCTCTGAACAACCTCCAGGTGGCCGTGAAGAA...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGTCTCTGATCTGGAACTaGGCCTCATTCTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRSLIWN*ASFSLG
Trigger: TCCCAATGAGAATGAGGCCCAGTTCCAGATCAGAGA...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACAGGCACAGCTTCTGTaGCTGCTCTGGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAQAQLL*LLWLCF
Trigger: GAAACAGAGCCAGAGCAGCCACAGAAGCTGTGCCTG...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTGACACAACTGAAACCTaGGAGGCCAGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLDTTET*EARRRA
Trigger: TGCCCTCCTCCTGGCCTCCCAGGTTTCAGTTGTGTC...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACGGAGCCAGACTGCTTTaGGGGCCACATATGATCCTG +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHGARLL*GPHMIL
Trigger: CAGGATCATATGTGGCCCCCAAAGCAGTCTGGCTCC...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACCTTAGCCTTCATGGCTaGGAGCCAGACTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHLSLHG*EPDCFG
Trigger: CCCAAAGCAGTCTGGCTCCCAGCCATGAAGGCTAAG...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGTGGGTACAAGGTGCTaGAGTAGAAGACATCGATGT +
Preference number: 4 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAVGTRC*SRRHRC
Trigger: ACATCGATGTCTTCTACTTCAGCACCTTGTACCCAC...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTTCTGTCAGACACAACTaGAACCTGGGAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLSVRHN*NLGGQE
Trigger: CTCCTGGCCTCCCAGGTTTCAGTTGTGTCTGACAGA...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTAAACACCTTCATCTCATaGTTCAGGATCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALNTFIS*FRISGL
Trigger: AAGGCCTGAGATCCTGAAGCATGAGATGAAGGTGTT...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCCACATCCACTTCTGTTaGGTACTCTTTCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGHIHFC*VLFQLC
Trigger: GCAGAGCTGAAAGAGTACGCAACAGAAGTGGATGTG...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTTGTCTTGCGCACATATaGATCCTCGTCCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFCLAHI*ILVLQA
Trigger: TGCCTGAAGGACGAGGATCCATATGTGCGCAAGACA...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGCCACAATCCAGATCATaGCAGCCCGGGCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQPQSRS*QPGPQA
Trigger: AGCCTGAGGCCCGGGCTGCCATGATCTGGATTGTGG...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTTGTGTGCTCTCGTCATaGAAGCCCTCGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLCVLSS*KPSRKL
Trigger: GAGCTTCCTCGAGGGCTTCCATGACGAGAGCACACA...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGAAAGAGTTTCACAATaGCTGTCAGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAERVSQ*LSAAAA
Trigger: AGCTGCAGCTGCTGACAGCCATTGTGAAACTCTTTC...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCATGGTACTGCTGCTGTTaGAGGTGCCACGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAWYCCC*RCHEVG
Trigger: ACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCA...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCATGCTCCAAGATTGGCTaGTACTGCTGCTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRACSKIG*YCCCWR
Trigger: CCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCA...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGCCCACGCCACTaGTCAGGTCAAAGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQGCPRH*SGQRGH
Trigger: GTGACCTCTTTGACCTGACCAGTGGCGTGGGCACCC...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCTCTCTGATCTGGAACTaGGCCTCATTCTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: AVEGPLTPTGETKEPGAASLIWN*ASFSLG
Trigger: TCCCAATGAGAATGAGGCCCAGTTCCAGATCAGAGA...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGGGGCAGTCTCTGATCTaGAACTGGGCCTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLGQSLI*NWASFS
Trigger: TGAGAATGAGGCCCAGTTCCAGATCAGAGACTGCCC...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGACACCCAGGCCAGGTTaGCAGGGTCCATCCCATGAG +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQTPRPG*QGPSHE
Trigger: CTCATGGGATGGACCCTGCCAACCTGGCCTGGGTGT...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACGTGGGTACAAGGTGCTaGAGTAGAAGACATCGATGT +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHVGTRC*SRRHRC
Trigger: ACATCGATGTCTTCTACTTCAGCACCTTGTACCCAC...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAAACACCTTCATCTCATaGTTCAGGATCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGNTFIS*FRISGL
Trigger: AAGGCCTGAGATCCTGAAGCATGAGATGAAGGTGTT...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGCACATCCACTTCTGTTaGGTACTCTTTCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGHIHFC*VLFQLC
Trigger: GCAGAGCTGAAAGAGTACGCAACAGAAGTGGATGTG...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGCCACTGCCGATGGGTaGTCCAAGATTGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQATADG*SKIGWY
Trigger: GTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGC...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGCTCTGGGAGCTTCTaGCTGGTCTTGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQGSGSF*LVLTMW
Trigger: CCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCC...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTAGATTCTCACACAGTGTaGCAATCACACTCTCATACT +
Preference number: 4 (lower is better)
Translates to: SLALPLCRHLQLLEPQALDSHTV*QSHSHT
Trigger: AGTATGAGAGTGTGATTGCCACACTGTGTGAGAATC...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACGAAAGAGTTTCACAATaGCTGTCAGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHERVSQ*LSAAAA
Trigger: AGCTGCAGCTGCTGACAGCCATTGTGAAACTCTTTC...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTTGCTCCAAGATTGGCTaGTACTGCTGCTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLCSKIG*YCCCWR
Trigger: CCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCA...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCTCTGATCTGGAACTaGGCCTCATTCTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHSLIWN*ASFSLG
Trigger: TCCCAATGAGAATGAGGCCCAGTTCCAGATCAGAGA...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCGGGCTGCCGGGGCTGTaGGCCGGAGGGGCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTGLPGL*AGGASS
Trigger: GGAGCTTGCCCCTCCGGCTCACAGCCCCGGCAGCCC...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGCACATCCACTTCTGTTaGGTACTCTTTCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLHIHFC*VLFQLC
Trigger: GCAGAGCTGAAAGAGTACGCAACAGAAGTGGATGTG...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGCTTGTTGATGGACTGTaGGTTCAGATCGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLLVDGL*VQIEQV
Trigger: AACCTGCTCGATCTGAACCCACAGTCCATCAACAAG...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCAGAAAGAGTTTCACAATaGCTGTCAGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRAERVSQ*LSAAAA
Trigger: AGCTGCAGCTGCTGACAGCCATTGTGAAACTCTTTC...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGTCAGCTGCAGGTCCATaGAGATGGAGCCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQSAAGP*RWSPLL
Trigger: AAGCAGTGGGCTCCATCTCCATGGACCTGCAGCTGA...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317368.11
CDS-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCTGTTGCGGTTGAACTaGATGGCAAAGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLLLRLN*MAKSVM
Trigger: CATGACCGACTTTGCCATCCAGTTCAACCGCAACAG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGCAAAGCTGTTGCGGTTaGACTGGATGGCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQQSCCG*TGWQSR
Trigger: CCGACTTTGCCATCCAGTTCAACCGCAACAGCTTTG...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCTTGTTGATGGACTGTaGGTTCAGATCGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLLVDGL*VQIEQV
Trigger: AACCTGCTCGATCTGAACCCACAGTCCATCAACAAG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACGATTCTCACACAGTGTaGCAATCACACTCTCATACT +
Preference number: 4 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHDSHTV*QSHSHT
Trigger: AGTATGAGAGTGTGATTGCCACACTGTGTGAGAATC...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGTGCTGCACCAGCTCCTaGGTCTCTGTTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQCCTSS*VSVGFF
Trigger: AAAGAAGCCAACAGAGACCCAGGAGCTGGTGCAGCA...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCCGCCCTGGGCGGGGATaGCATCTGGCTGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTRPGRG*HLAAPQ
Trigger: CTGGGGAGCAGCCAGATGTCATCCCCGCCCAGGGCG...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGAAAAGTGTCCGTGATTaGCAAAAGCCGAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGKSVRD*QKPNLS
Trigger: AGAAAGATTCGGCTTTTGGCAATCACGGACACTTTT...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGTGTCTTGCGCACATATaGATCCTCGTCCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQCLAHI*ILVLQA
Trigger: TGCCTGAAGGACGAGGATCCATATGTGCGCAAGACA...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCGGGTGGGCCGCTCACTaGGGGGCCGAGGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTGWAAH*GAEVQV
Trigger: AACCTGGACCTCGGCCCCCCAGTGAGCGGCCCACCC...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGCTGTTGCGGTTGAACTaGATGGCAAAGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQLLRLN*MAKSVM
Trigger: CATGACCGACTTTGCCATCCAGTTCAACCGCAACAG...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCGCGAGGAGGAAGATGTaGTGCCCCCGAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTARRKM*CPRGAS
Trigger: GGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGC...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCCGCGGATGCAGCCCATaGTCCGCACTGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTRGCSP*SALPGL
Trigger: GAGCCCTGGCAGTGCGGACCATGGGCTGCATCCGCG...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGCTTGTTGATGGACTGTaGGTTCAGATCGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQLVDGL*VQIEQV
Trigger: AACCTGCTCGATCTGAACCCACAGTCCATCAACAAG...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR TCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCCTGTCTGGTTGGGGCTaGGTGGCGCGTGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTLSGWG*VARGPG
Trigger: TCCAGGTCCACGCGCCACTCAGCCCCAACCAGACAG...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCCACCACCTCCTTGGCTaGCACCGGGTCCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTHHLLG*HRVRGQ
Trigger: CTGTCCACGGACCCGGTGGCAGCCAAGGAGGTGGTG...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTAAAAGTGTCCGTGATTaGCAAAAGCCGAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLKSVRD*QKPNLS
Trigger: AGAAAGATTCGGCTTTTGGCAATCACGGACACTTTT...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCCTGCTCCCCAGGAGGTaGTCCAGTAGGGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTLLPRR*SSRGCL
Trigger: GAGACAGCCCCTACTGGAGCACCTCCTGGGGAGCAG...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGATTCTCACACAGTGTaGCAATCACACTCTCATACT +
Preference number: 4 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQDSHTV*QSHSHT
Trigger: AGTATGAGAGTGTGATTGCCACACTGTGTGAGAATC...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCAGGCTGTGGCCCAACTaGCACAGCTGCAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTRLWPN*HSCRAP
Trigger: TGGTGCCCTGCAGCTGTGCCAGTTGGGCCACAGCCT...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCGCCTGGTACACGTGCTaGGACACCTCTGGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTAWYTC*DTSGAR
Trigger: TCGAGCACCAGAGGTGTCCCAGCACGTGTACCAGGC...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCGGCCACGCACACAGCTaGTGTCTTGCGCACATATGG +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTGHAHS*CLAHIW
Trigger: CCATATGTGCGCAAGACAGCAGCTGTGTGCGTGGCC...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCGCAGCTGGACCTGTGTaGTCTCGTCATGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTAAGPV*SRHGSP
Trigger: AGGGCTTCCATGACGAGAGCACACAGGTCCAGCTGC...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCATGATCCTGACAGGGTaGCCACGCCACTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTMILTG*PRHWSG
Trigger: ACCTGACCAGTGGCGTGGGCACCCTGTCAGGATCAT...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCGTCAGCAGCTGCAGCTaGACCTGTGTGCTCTCGTCA +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTVSSCS*TCVLSS
Trigger: TGACGAGAGCACACAGGTCCAGCTGCAGCTGCTGAC...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR GCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCATTGGCTGGTACTGCTaGTGTTGGAGGTGCCACGAA +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTIGWYC*CWRCHE
Trigger: TTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAAT...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CCA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCTCTCTGATCTGGAACTaGGCCTCATTCTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTSLIWN*ASFSLG
Trigger: TCCCAATGAGAATGAGGCCCAGTTCCAGATCAGAGA...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS GCA 90 bp AAATGTCCGCGGCCTCCACCTCTCGCTCTCCCGGTGCGTCCGGGCTaGCGGCGGCTCGGAGCCCCGCGGCTGTCACCTGCCGGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: KCPRPPPLALPVRPG*RRLGAPRLSPAGRK
Trigger: CTTCCGCCCGGCAGGTGACAGCCGCGGGGCTCCGAGCCGCCGGCAGCCCGGACGCACCGGGAGAGCGAGAGGTGGAGGCCGCGGACATTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS GCA 90 bp GCTTGGCACCAAAATGTCCGCGGCCTCCACCTCTCGCTCTCCCGGTaGGTCCGGGCTGCCGGCGGCTCGGAGCCCCGCGGCTGTCACCTG +
Preference number: 5 (lower is better)
Translates to: AWHQNVRGLHLSLSR*VRAAGGSEPRGCHL
Trigger: CAGGTGACAGCCGCGGGGCTCCGAGCCGCCGGCAGCCCGGACGCACCGGGAGAGCGAGAGGTGGAGGCCGCGGACATTTTGGTGCCAAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS TCA 90 bp CGTGGAGTGCACACAGCCTGGCGGCAGCTGCGCCTGGCACAGATGTaGGGTAAAGCGGAGGGGGCGGCTGTCGCAGCCAGCCGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: RGVHTAWRQLRLAQM*GKAEGAAVAASRVW
Trigger: CCACACCCGGCTGGCTGCGACAGCCGCCCCCTCCGCTTTACCTCACATCTGTGCCAGGCGCAGCTGCCGCCAGGCTGTGTGCACTCCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS-3UTR CAA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAGGGCCGAGGTCCAGGTaGAGGAGGTCACCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRGPRSR*RRSPSR
Trigger: CCTGCTGGGTGACCTCCTCAACCTGGACCTCGGCCC...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCAGCGTGCAGCTGGGGTaGCCCGGCTGGATCCGCAGC +
Preference number: 5 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEASVQLG*PGWIRS
Trigger: GCTGCGGATCCAGCCGGGCAACCCCAGCTGCACGCT...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGACAGCGCTCCGCAGATaGCTCCACCTTGATGGCGCA +
Preference number: 5 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRTALRR*LHLDGA
Trigger: TGCGCCATCAAGGTGGAGCAATCTGCGGAGCGCTGT...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGCCAACACCACCTCCTaGGCTGCCACCGGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAANTTS*AATGSV
Trigger: CACGGACCCGGTGGCAGCCAAGGAGGTGGTGTTGGC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCGAGGTGGCAGGCTCTaGTGCACGACGCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWRGGRL*CTTPRP
Trigger: GGGCCGGGGCGTCGTGCACAAGAGCCTGCCACCTCG...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCCGAGGTGGCAGGCTCTaGTGCACGACGCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: AVEGPLTPTGETKEPGAARGGRL*CTTPRP
Trigger: GGGCCGGGGCGTCGTGCACAAGAGCCTGCCACCTCG...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGCTCGCAGCCTCTGCATaGAGGGGGCAGTCTCTGATC +
Preference number: 5 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRLAASA*RGQSLI
Trigger: GATCAGAGACTGCCCCCTCAATGCAGAGGCTGCGAG...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGTTGCTGCTCTGCAGCTaGCTGCTCGCAGCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRLLLCS*LLAASA
Trigger: TGCAGAGGCTGCGAGCAGCAAGCTGCAGAGCAGCAA...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAGCACCAGCCTGGTGGTaGCAAGTGGGTGGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRAPAWW*QVGGAG
Trigger: GCCTGCACCACCCACTTGCAACCACCAGGCTGGTGC...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTATCCGTGCAGCTGGGGTaGCCCGGCTGGATCCGCAGC +
Preference number: 5 (lower is better)
Translates to: SLALPLCRHLQLLEPQALSVQLG*PGWIRS
Trigger: GCTGCGGATCCAGCCGGGCAACCCCAGCTGCACGGA...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS TCA 90 bp GCCCCAGGCCAATTGCTCTGCTCTGCCCCAGCCTGGCTGCAGGCCTaGAGCCCAGCTCTGTTCCTCTCCTCTGGGCCAGGCACTGGTGGG +
Preference number: 5 (lower is better)
Translates to: APGQLLCSAPAWLQA*SPALFLSSGPGTGG
Trigger: CCCACCAGTGCCTGGCCCAGAGGAGAGGAACAGAGCTGGGCTTCAGGCCTGCAGCCAGGCTGGGGCAGAGCAGAGCAATTGGCCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 90 bp GGCCTGAAGCCCAGCTCTGTTCCTCTCCTCTGGGCCAGGCACTGGTaGGCCCAGGTAGGCAGGCCTTGCCCTGTCCTGCCCTCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: GLKPSSVPLLWARHW*AQVGRPCPVLPSRS
Trigger: GCTCCTTGAGGGCAGGACAGGGCAAGGCCTGCCTACCTGGGCCCACCAGTGCCTGGCCCAGAGGAGAGGAACAGAGCTGGGCTTCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS-3UTR CAA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTAGCACCACAGCGGAGTaGGCATGGGAGAGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTASTTAE*AWESLG
Trigger: CCCCAGGCTCTCCCATGCCAACTCCGCTGTGGTGCT...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGCCAACACCACCTCCTaGGCTGCCACCGGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPANTTS*AATGSV
Trigger: CACGGACCCGGTGGCAGCCAAGGAGGTGGTGTTGGC...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGGGCCGAGGTCCAGGTaGAGGAGGTCACCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQGPRSR*RRSPSR
Trigger: CCTGCTGGGTGACCTCCTCAACCTGGACCTCGGCCC...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGGGGCCGAGGTCCAGGTaGAGGAGGTCACCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRGPRSR*RRSPSR
Trigger: CCTGCTGGGTGACCTCCTCAACCTGGACCTCGGCCC...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAATCTCCACTGTCTGGTaGGGGCTGAGTGGCGCGTGG +
Preference number: 5 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRISTVW*GLSGAW
Trigger: CCACGCGCCACTCAGCCCCAACCAGACAGTGGAGAT...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGACGGCCACCTGGAGGTaGTTCAGAGGCTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRTATWR*FRGSIF
Trigger: GAAGATGGAGCCTCTGAACAACCTCCAGGTGGCCGT...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAAGCGTGCAGCTGGGGTaGCCCGGCTGGATCCGCAGC +
Preference number: 5 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGSVQLG*PGWIRS
Trigger: GCTGCGGATCCAGCCGGGCAACCCCAGCTGCACGCT...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGCACCAGCCTGGTGGTaGCAAGTGGGTGGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQAPAWW*QVGGAG
Trigger: GCCTGCACCACCCACTTGCAACCACCAGGCTGGTGC...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGCACCAGCCTGGTGGTaGCAAGTGGGTGGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAAPAWW*QVGGAG
Trigger: GCCTGCACCACCCACTTGCAACCACCAGGCTGGTGC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS TCA 90 bp GGCGGGCAGAAGGCTGGGGTGGGCGCTGGCCGGGGTCTCAGTTCTTaGGGATGGTCTCGTAGGCCTGGTACACGTGCTGGGACACCTCTG +
Preference number: 5 (lower is better)
Translates to: GGQKAGVGAGRGLSS*GWSRRPGTRAGTPL
Trigger: CAGAGGTGTCCCAGCACGTGTACCAGGCCTACGAGACCATCCTCAAGAACTGAGACCCCGGCCAGCGCCCACCCCAGCCTTCTGCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000482818.1
CDS CCA 90 bp TGCGGGACAGGTGAGCTCCTCCGACTCGGGAGCTGGGGCTGTGGTTaGCAGGGAGCCTCTCACCGTGCCAGCCTTCCCATGTTCTGGACC +
Preference number: 5 (lower is better)
Translates to: CGTGELLRLGSWGCG*QGASHRASLPMFWT
Trigger: GGTCCAGAACATGGGAAGGCTGGCACGGTGAGAGGCTCCCTGCCAACCACAGCCCCAGCTCCCGAGTCGGAGGAGCTCACCTGTCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 90 bp CAATGGGACAGCGTGGAGTGCACACAGCCTGGCGGCAGCTGCGCCTaGCACAGATGTGAGGTAAAGCGGAGGGGGCGGCTGTCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: QWDSVECTQPGGSCA*HRCEVKRRGRLSQP
Trigger: TGGCTGCGACAGCCGCCCCCTCCGCTTTACCTCACATCTGTGCCAGGCGCAGCTGCCGCCAGGCTGTGTGCACTCCACGCTGTCCCATTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS-3UTR CAA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTCCGGCTCGGTTCGGCTaGGCACCAAAATGTCCGCGG +
Preference number: 5 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPPARFG*APKCPR
Trigger: CCGCGGACATTTTGGTGCCAAGCCGAACCGAGCCGG...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTCCGGCTCGGTTCGGCTaGGCACCAAAATGTCCGCGG +
Preference number: 5 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWAPARFG*APKCPR
Trigger: CCGCGGACATTTTGGTGCCAAGCCGAACCGAGCCGG...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTAGCACCACAGCGGAGTaGGCATGGGAGAGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPSTTAE*AWESLG
Trigger: CCCCAGGCTCTCCCATGCCAACTCCGCTGTGGTGCT...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGGCCAACACCACCTCCTaGGCTGCCACCGGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRANTTS*AATGSV
Trigger: CACGGACCCGGTGGCAGCCAAGGAGGTGGTGTTGGC...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGCCAACACCACCTCCTaGGCTGCCACCGGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAANTTS*AATGSV
Trigger: CACGGACCCGGTGGCAGCCAAGGAGGTGGTGTTGGC...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGCGAGGTGGCAGGCTCTaGTGCACGACGCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLRGGRL*CTTPRP
Trigger: GGGCCGGGGCGTCGTGCACAAGAGCCTGCCACCTCG...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTGGAGGTGCCACGAAGTaGGTGCCCCCAATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAGGATK*VPPIRL
Trigger: CAGCCTGATTGGGGGCACCAACTTCGTGGCACCTCC...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGATTGCTGCTCTGCAGCTaGCTGCTCGCAGCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRLLLCS*LLAASA
Trigger: TGCAGAGGCTGCGAGCAGCAAGCTGCAGAGCAGCAA...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS GCA 90 bp CCGACTCGGGAGCTGGGGCTGTGGTTGGCAGGGAGCCTCTCACCGTaGCAGCCTTCCCATGTTCTGGACCCTGGACAGAAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: PTRELGLWLAGSLSP*QPSHVLDPGQKDGL
Trigger: CAGCCCATCCTTCTGTCCAGGGTCCAGAACATGGGAAGGCTGGCACGGTGAGAGGCTCCCTGCCAACCACAGCCCCAGCTCCCGAGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS GCA 90 bp AGGAACCAATGGGACAGCGTGGAGTGCACACAGCCTGGCGGCAGCTaGGCCTGGCACAGATGTGAGGTAAAGCGGAGGGGGCGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: RNQWDSVECTQPGGS*AWHRCEVKRRGRLS
Trigger: CGACAGCCGCCCCCTCCGCTTTACCTCACATCTGTGCCAGGCGCAGCTGCCGCCAGGCTGTGTGCACTCCACGCTGTCCCATTGGTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS-3UTR CAA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCCCGGCTCGGTTCGGCTaGGCACCAAAATGTCCGCGG +
Preference number: 5 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGPARFG*APKCPR
Trigger: CCGCGGACATTTTGGTGCCAAGCCGAACCGAGCCGG...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTATCCACCAGCTGGGCGTaGATGTCGTGGAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SLALPLCRHLQLLEPQALSTSWA*MSWSLA
Trigger: GGCCAAGCTCCACGACATCAACGCCCAGCTGGTGGA...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGACGATGAGATTGATGTaGCGCAGGGCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRTMRLM*RRATYC
Trigger: GCAGTATGTGGCCCTGCGCAACATCAATCTCATCGT...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCACAGCGCTCCGCAGATaGCTCCACCTTGATGGCGCA +
Preference number: 5 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEATALRR*LHLDGA
Trigger: TGCGCCATCAAGGTGGAGCAATCTGCGGAGCGCTGT...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAAGCAGCTCATCTGCGTaGTCGATCCGTTCCGCGTAC +
Preference number: 5 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRSSSSA*SIRSAY
Trigger: GTACGCGGAACGGATCGACAACGCAGATGAGCTGCT...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCGAGGTGGCAGGCTCTaGTGCACGACGCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLRGGRL*CTTPRP
Trigger: GGGCCGGGGCGTCGTGCACAAGAGCCTGCCACCTCG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGATGGGTGCTCCAAGATaGGCTGGTACTGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRMGAPR*AGTAAV
Trigger: AACAGCAGCAGTACCAGCCAATCTTGGAGCACCCAT...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAGCCAGGCCAAAGCTGTaGCGGTTGAACTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRARPKL*RLNWMA
Trigger: TGCCATCCAGTTCAACCGCAACAGCTTTGGCCTGGC...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGAGCACCCAGATGCCGTaGGTCAGCTTCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQSTQMP*VSFRDW
Trigger: CCAGTCCCTGAAGCTGACCAACGGCATCTGGGTGCT...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGCTGGCTCTGTTTCCTTaGGTCCCCACCTCACTTAAC +
Preference number: 5 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRLALFP*VPTSLN
Trigger: GTTAAGTGAGGTGGGGACCAAAGGAAACAGAGCCAG...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGCAGAAGTGGGGAGTaGGGGATAGTGCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQGRSGE*GIVQLP
Trigger: TGGCAGCTGCACTATCCCCAACTCCCCACTTCTGCC...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGAAGGTACTCTGTGATCTaGTCAACGCGGATGCAGCCC +
Preference number: 5 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRRYSVI*STRMQP
Trigger: GGGCTGCATCCGCGTTGACAAGATCACAGAGTACCT...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTTTGATGTCGTGGAGCTaGGCCACGCACACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTALMSWS*ATHTAA
Trigger: AGCAGCTGTGTGCGTGGCCAAGCTCCACGACATCAA...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGTCCACCAGCTGGGCGTaGATGTCGTGGAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRSTSWA*MSWSLA
Trigger: GGCCAAGCTCCACGACATCAACGCCCAGCTGGTGGA...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCTCCACCAGCTGGGCGTaGATGTCGTGGAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: AVEGPLTPTGETKEPGAASTSWA*MSWSLA
Trigger: GGCCAAGCTCCACGACATCAACGCCCAGCTGGTGGA...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGAGCACCACAGCGGAGTaGGCATGGGAGAGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVSTTAE*AWESLG
Trigger: CCCCAGGCTCTCCCATGCCAACTCCGCTGTGGTGCT...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGAGCACCACAGCGGAGTaGGCATGGGAGAGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGSTTAE*AWESLG
Trigger: CCCCAGGCTCTCCCATGCCAACTCCGCTGTGGTGCT...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCGGAGGTGCCACGAAGTaGGTGCCCCCAATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGGGATK*VPPIRL
Trigger: CAGCCTGATTGGGGGCACCAACTTCGTGGCACCTCC...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTCTGGTACTGCTGCTGTaGGAGGTGCCACGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTALVLLL*EVPRSW
Trigger: CCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAG...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAATCTCCACTGTCTGGTaGGGGCTGAGTGGCGCGTGG +
Preference number: 5 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGISTVW*GLSGAW
Trigger: CCACGCGCCACTCAGCCCCAACCAGACAGTGGAGAT...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTACGGCCACCTGGAGGTaGTTCAGAGGCTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTATATWR*FRGSIF
Trigger: GAAGATGGAGCCTCTGAACAACCTCCAGGTGGCCGT...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCTCGCAGCCTCTGCATaGAGGGGGCAGTCTCTGATC +
Preference number: 5 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQLAASA*RGQSLI
Trigger: GATCAGAGACTGCCCCCTCAATGCAGAGGCTGCGAG...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCACCAGCCTGGTGGTaGCAAGTGGGTGGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGAPAWW*QVGGAG
Trigger: GCCTGCACCACCCACTTGCAACCACCAGGCTGGTGC...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGGGAGCCAGACTGCTTaGGGGGCCACATATGATCCT +
Preference number: 5 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAGSQTA*GATYDP
Trigger: AGGATCATATGTGGCCCCCAAAGCAGTCTGGCTCCC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS TCA 90 bp CTGCAGGTCCATGGAGATGGAGCCCACCTGGCGGGTGAAGGTGCCTaGGATCTCCAGCCCCTTAGCCTTCATGGCTGGGAGCCAGACTGC +
Preference number: 5 (lower is better)
Translates to: LQVHGDGAHLAGEGA*DLQPLSLHGWEPDC
Trigger: GCAGTCTGGCTCCCAGCCATGAAGGCTAAGGGGCTGGAGATCTCAGGCACCTTCACCCGCCAGGTGGGCTCCATCTCCATGGACCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 90 bp CTTGAGGATGGTCTCGTAGGCCTGGTACACGTGCTGGGACACCTCTaGTGCTCGACACTTCAGGGACAGCGTGCAGCTGGGGTTGCCCGG +
Preference number: 5 (lower is better)
Translates to: LEDGLVGLVHVLGHL*CSTLQGQRAAGVAR
Trigger: CCGGGCAACCCCAGCTGCACGCTGTCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAGCACGTGTACCAGGCCTACGAGACCATCCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGCCGGCTCGGTTCGGCTaGGCACCAAAATGTCCGCGG +
Preference number: 5 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLPARFG*APKCPR
Trigger: CCGCGGACATTTTGGTGCCAAGCCGAACCGAGCCGG...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGTCCGTCTGCATGCAGTaGACCACATCGGGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQSVCMQ*TTSGKR
Trigger: CCTCTTCCCCGATGTGGTCAACTGCATGCAGACGGA...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGCACACAGCTGCTGTCTaGCGCACATATGGATCCTCG +
Preference number: 5 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQHTAAV*RTYGSS
Trigger: CGAGGATCCATATGTGCGCAAGACAGCAGCTGTGTG...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCTGGGCTTTGATGTCGTGGAGCTaGGCCACGCACACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PLTQPHLSAQSLWQEAWALMSWS*ATHTAA
Trigger: AGCAGCTGTGTGCGTGGCCAAGCTCCACGACATCAA...AGCCCAGGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGTTGATGTCGTGGAGCTaGGCCACGCACACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRLMSWS*ATHTAA
Trigger: AGCAGCTGTGTGCGTGGCCAAGCTCCACGACATCAA...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCACAGCGCTCCGCAGATaGCTCCACCTTGATGGCGCA +
Preference number: 5 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGTALRR*LHLDGA
Trigger: TGCGCCATCAAGGTGGAGCAATCTGCGGAGCGCTGT...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGATCACACTCTCATACTaGTTGGGGTACTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRITLSY*LGYLRK
Trigger: CTTCCGCAAGTACCCCAACAAGTATGAGAGTGTGAT...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTAGCAGCTCATCTGCGTaGTCGATCCGTTCCGCGTAC +
Preference number: 5 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPSSSSA*SIRSAY
Trigger: GTACGCGGAACGGATCGACAACGCAGATGAGCTGCT...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGTGGCCTGGAGCCCCGCCTGGTCCCTCCTGCGAGGAGGGCTCCTGGGTCTCTGTaGGCTTCTTTAGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: PGSPLSGLEPRLVPPARRAPGSL*ASLERV
Trigger: AACTCTTTCTAAAGAAGCCAACAGAGACCCAGGAGC...CCTCCTCGCAGGAGGGACCAGGCGGGGCTCCAGGCCACTCAGTGGGCTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGATGACCTGCAAGGCCTaGTTGGTCAGCTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRMTCKA*LVSCRS
Trigger: GGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCAT...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCTGGTCCCTCCTGCGAGGAGGAAGATGTGCTGCCCCCGAGGGGCCTCCTCGACCAAAGCTGTTGCGGTaGAACTGGATGGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: AWSLLRGGRCAAPEGPPRPKLLR*NWMAKS
Trigger: CGACTTTGCCATCCAGTTCAACCGCAACAGCTTTGG...TCGAGGAGGCCCCTCGGGGGCAGCACATCTTCCTCCTCGCAGGAGGGACCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTACGGCCACCTGGAGGTaGTTCAGAGGCTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPTATWR*FRGSIF
Trigger: GAAGATGGAGCCTCTGAACAACCTCCAGGTGGCCGT...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCACTCGCAGCCTCTGCATaGAGGGGGCAGTCTCTGATC +
Preference number: 5 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVALAASA*RGQSLI
Trigger: GATCAGAGACTGCCCCCTCAATGCAGAGGCTGCGAG...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTTGCTGCTCTGCAGCTaGCTGCTCGCAGCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGLLLCS*LLAASA
Trigger: TGCAGAGGCTGCGAGCAGCAAGCTGCAGAGCAGCAA...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGCGACAGTGAAGATGTaGCTGCTCTGCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAATVKM*LLCSLL
Trigger: CAGCAAGCTGCAGAGCAGCAACATCTTCACTGTCGC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCAGCACCCAGATGCCGTaGGTCAGCTTCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: AVEGPLTPTGETKEPGAASTQMP*VSFRDW
Trigger: CCAGTCCCTGAAGCTGACCAACGGCATCTGGGTGCT...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAAGCACCCAGATGCCGTaGGTCAGCTTCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGSTQMP*VSFRDW
Trigger: CCAGTCCCTGAAGCTGACCAACGGCATCTGGGTGCT...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAAGCACCCAGATGCCGTaGGTCAGCTTCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVASTQMP*VSFRDW
Trigger: CCAGTCCCTGAAGCTGACCAACGGCATCTGGGTGCT...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGCAGAAGTGGGGAGTaGGGGATAGTGCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAGRSGE*GIVQLP
Trigger: TGGCAGCTGCACTATCCCCAACTCCCCACTTCTGCC...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGGGAGGTGCCACGAAGTaGGTGCCCCCAATCCCTTCA +
Preference number: 5 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWGGATK*VPPIPS
Trigger: TGAAGGGATTGGGGGCACCAACTTCGTGGCACCTCC...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS-3UTR CAA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGGGAGCCAGACTGCTTaGGGGGCCACATATGATCCT +
Preference number: 5 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQGSQTA*GATYDP
Trigger: AGGATCATATGTGGCCCCCAAAGCAGTCTGGCTCCC...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGGGGAGCCAGACTGCTTaGGGGGCCACATATGATCCT +
Preference number: 5 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRGSQTA*GATYDP
Trigger: AGGATCATATGTGGCCCCCAAAGCAGTCTGGCTCCC...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS TCA 90 bp CCTCGTCCTTCAGGCACTTCCGGAGTGGCTCGCACAGGTACTCTGTaGTCTTGTCAACGCGGATGCAGCCCATGGTCCGCACTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PRPSGTSGVARTGTL*SCQRGCSPWSALPG
Trigger: CCCTGGCAGTGCGGACCATGGGCTGCATCCGCGTTGACAAGATCACAGAGTACCTGTGCGAGCCACTCCGGAAGTGCCTGAAGGACGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS GCA 90 bp GCCGATGGGTGCTCCAAGATTGGCTGGTACTGCTGCTGTTGGAGGTaGCACGAAGTTGGTGCCCCCAATCAGGCTGTCAAGGCCACCGCC +
Preference number: 5 (lower is better)
Translates to: ADGCSKIGWYCCCWR*HEVGAPNQAVKATA
Trigger: GGCGGTGGCCTTGACAGCCTGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 90 bp TCCCAGCTGGACATGCAGGCACTCACAGGACAGGGCCAGGGCCTGTaGCCAGCAATGTCACTTCCCAGTCAGGGGTGCCAAACCAACTGC +
Preference number: 5 (lower is better)
Translates to: SQLDMQALTGQGQGL*PAMSLPSQGCQTNC
Trigger: GCAGTTGGTTTGGCACCCCTGACTGGGAAGTGACATTGCTGGGCACAGGCCCTGGCCCTGTCCTGTGAGTGCCTGCATGTCCAGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS-3UTR CAA 90 bp GGAGGGGGTGGTGCCCTACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGTTCTTCAGCTCCAGGTaGTCCGTCTGCATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GGGGALPQGSGGFCHQDQFFSSR*SVCMQL
Trigger: CAACTGCATGCAGACGGACAACCTGGAGCTGAAGAA...CTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTAGGGCACCACCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGAGGTACTCTGTGATCTaGTCAACGCGGATGCAGCCC +
Preference number: 5 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRRYSVI*STRMQP
Trigger: GGGCTGCATCCGCGTTGACAAGATCACAGAGTACCT...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTAGGTACTCTGTGATCTaGTCAACGCGGATGCAGCCC +
Preference number: 5 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPRYSVI*STRMQP
Trigger: GGGCTGCATCCGCGTTGACAAGATCACAGAGTACCT...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCACACAGCTGCTGTCTaGCGCACATATGGATCCTCG +
Preference number: 5 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRHTAAV*RTYGSS
Trigger: CGAGGATCCATATGTGCGCAAGACAGCAGCTGTGTG...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTACACACAGCTGCTGTCTaGCGCACATATGGATCCTCG +
Preference number: 5 (lower is better)
Translates to: SLALPLCRHLQLLEPQALHTAAV*RTYGSS
Trigger: CGAGGATCCATATGTGCGCAAGACAGCAGCTGTGTG...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp TACCCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGAGCAGCTCATCTGCGTaGTCGATCCGTTCCGCGTAC +
Preference number: 5 (lower is better)
Translates to: YPRDRVGSAIRTREPTEWSSSSA*SIRSAY
Trigger: GTACGCGGAACGGATCGACAACGCAGATGAGCTGCT...CCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAACCTGCAAGGCCTTGTaGGTCAGCTGCAGGTCCATG +
Preference number: 5 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGTCKAL*VSCRSM
Trigger: CATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGT...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCACCTGCAAGGCCTTGTaGGTCAGCTGCAGGTCCATG +
Preference number: 5 (lower is better)
Translates to: AVEGPLTPTGETKEPGAATCKAL*VSCRSM
Trigger: CATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGT...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGATGACCTGCAAGGCCTaGTTGGTCAGCTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRMTCKA*LVSCRS
Trigger: GGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCAT...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCATGACCTGCAAGGCCTaGTTGGTCAGCTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGMTCKA*LVSCRS
Trigger: GGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCAT...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGGGCCAGGCCAAAGCTGTaGCGGTTGAACTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: SGGPFNTNRRDQGARGCRARPKL*RLNWMA
Trigger: TGCCATCCAGTTCAACCGCAACAGCTTTGGCCTGGC...CCGGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCGCCAGGCCAAAGCTGTaGCGGTTGAACTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGARPKL*RLNWMA
Trigger: TGCCATCCAGTTCAACCGCAACAGCTTTGGCCTGGC...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGCCCTCCACGTTCCTCTaGGCGACAGTGAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQPSTFL*ATVKML
Trigger: CAACATCTTCACTGTCGCCAAGAGGAACGTGGAGGG...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCCTGGCTCTGTTTCCTTaGGTCCCCACCTCACTTAAC +
Preference number: 5 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEALALFP*VPTSLN
Trigger: GTTAAGTGAGGTGGGGACCAAAGGAAACAGAGCCAG...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTAGCTTCTGCCTGGTCTaGACCATGTGGGTCAGCACT +
Preference number: 5 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPSFCLV*TMWVST
Trigger: AGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCT...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS GCA 90 bp GGGTGCCCACGCCACTGGTCAGGTCAAAGAGGTCACTCAGGCCACTaGCGATGGGTGCTCCAAGATTGGCTGGTACTGCTGCTGTTGGAG +
Preference number: 5 (lower is better)
Translates to: GCPRHWSGQRGHSGH*RWVLQDWLVLLLLE
Trigger: CTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACCTCTTTGACCTGACCAGTGGCGTGGGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 90 bp CTGGGAGCCAGACTGCTTTGGGGGCCACATATGATCCTGACAGGGTaGCCACGCCACTGGTCAGGTCAAAGAGGTCACTCAGGCCACTGC +
Preference number: 5 (lower is better)
Translates to: LGARLLWGPHMILTG*PRHWSGQRGHSGHC
Trigger: GCAGTGGCCTGAGTGACCTCTTTGACCTGACCAGTGGCGTGGGCACCCTGTCAGGATCATATGTGGCCCCCAAAGCAGTCTGGCTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 90 bp GCCATCTGGACAGAAAGAAAGAGCCCCAGGCCAATTGCTCTGCTCTaGCCCAGCCTGGCTGCAGGCCTGAAGCCCAGCTCTGTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: AIWTERKSPRPIALL*PSLAAGLKPSSVPL
Trigger: GAGAGGAACAGAGCTGGGCTTCAGGCCTGCAGCCAGGCTGGGGCAGAGCAGAGCAATTGGCCTGGGGCTCTTTCTTTCTGTCCAGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 90 bp GCCACTGCCGATGGGTGCTCCAAGATTGGCTGGTACTGCTGCTGTTaGAGGTGCCACGAAGTTGGTGCCCCCAATCAGGCTGTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: ATADGCSKIGWYCCC*RCHEVGAPNQAVKA
Trigger: GGCCTTGACAGCCTGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 90 bp CTGCTTTGGGGGCCACATATGATCCTGACAGGGTGCCCACGCCACTaGTCAGGTCAAAGAGGTCACTCAGGCCACTGCCGATGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: LLWGPHMILTGCPRH*SGQRGHSGHCRWVL
Trigger: GAGCACCCATCGGCAGTGGCCTGAGTGACCTCTTTGACCTGACCAGTGGCGTGGGCACCCTGTCAGGATCATATGTGGCCCCCAAAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 90 bp CTCACCGTGCCAGCCTTCCCATGTTCTGGACCCTGGACAGAAGGATaGGCTGTGGGTCCCCTCCCCCAGATGGCCATCTGGACAGAAAGA +
Preference number: 5 (lower is better)
Translates to: LTVPAFPCSGPWTEG*AVGPLPQMAIWTER
Trigger: TCTTTCTGTCCAGATGGCCATCTGGGGGAGGGGACCCACAGCCCATCCTTCTGTCCAGGGTCCAGAACATGGGAAGGCTGGCACGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS-3UTR CAA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGTTCTTCAGCTCCAGGTaGTCCGTCTGCATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQFFSSR*SVCMQL
Trigger: CAACTGCATGCAGACGGACAACCTGGAGCTGAAGAA...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGACGATGAGATTGATGTaGCGCAGGGCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: RRTRLPSPISRPSLCGRRTMRLM*RRATYC
Trigger: GCAGTATGTGGCCCTGCGCAACATCAATCTCATCGT...CCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCCAGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTACGATGAGATTGATGTaGCGCAGGGCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: PRDRVGSAIRTREPTEWPTMRLM*RRATYC
Trigger: GCAGTATGTGGCCCTGCGCAACATCAATCTCATCGT...AGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGACGATGAGATTGATGTaGCGCAGGGCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQTMRLM*RRATYC
Trigger: GCAGTATGTGGCCCTGCGCAACATCAATCTCATCGT...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCTGGTACTGCTGCTGTaGGAGGTGCCACGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVLVLLL*EVPRSW
Trigger: CCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTACCTGCAAGGCCTTGTaGGTCAGCTGCAGGTCCATG +
Preference number: 5 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFTCKAL*VSCRSM
Trigger: CATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGT...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGACCTGCAAGGCCTTGTaGGTCAGCTGCAGGTCCATG +
Preference number: 5 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVTCKAL*VSCRSM
Trigger: CATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGT...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTATGACCTGCAAGGCCTaGTTGGTCAGCTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFMTCKA*LVSCRS
Trigger: GGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCAT...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCATTGCTGCTCTGCAGCTaGCTGCTCGCAGCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRALLLCS*LLAASA
Trigger: TGCAGAGGCTGCGAGCAGCAAGCTGCAGAGCAGCAA...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCGCGACAGTGAAGATGTaGCTGCTCTGCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGATVKM*LLCSLL
Trigger: CAGCAAGCTGCAGAGCAGCAACATCTTCACTGTCGC...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCCCCTCCACGTTCCTCTaGGCGACAGTGAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAPSTFL*ATVKML
Trigger: CAACATCTTCACTGTCGCCAAGAGGAACGTGGAGGG...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTACTGGCTCTGTTTCCTTaGGTCCCCACCTCACTTAAC +
Preference number: 5 (lower is better)
Translates to: SLALPLCRHLQLLEPQALLALFP*VPTSLN
Trigger: GTTAAGTGAGGTGGGGACCAAAGGAAACAGAGCCAG...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAAGCTTCTGCCTGGTCTaGACCATGTGGGTCAGCACT +
Preference number: 5 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVASFCLV*TMWVST
Trigger: AGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCT...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCAGCTTCTGCCTGGTCTaGACCATGTGGGTCAGCACT +
Preference number: 5 (lower is better)
Translates to: AVEGPLTPTGETKEPGAASFCLV*TMWVST
Trigger: AGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCT...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS TCA 90 bp AAGGTCCTTCTCAGGGACCAAACTGATTCTAGTTCAAGCCAGGCTTaGAGGGACGCTTGGACCGCGTCCTCCACCAGGGCCACCCCCTGG +
Preference number: 5 (lower is better)
Translates to: KVLLRDQTDSSSSQA*RDAWTASSTRATPW
Trigger: CCAGGGGGTGGCCCTGGTGGAGGACGCGGTCCAAGCGTCCCTTCAAGCCTGGCTTGAACTAGAATCAGTTTGGTCCCTGAGAAGGACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS GCA 90 bp ACTCAGGCCACTGCCGATGGGTGCTCCAAGATTGGCTGGTACTGCTaGTGTTGGAGGTGCCACGAAGTTGGTGCCCCCAATCAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: TQATADGCSKIGWYC*CWRCHEVGAPNQAV
Trigger: GACAGCCTGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 90 bp GTCACTCAGGCCACTGCCGATGGGTGCTCCAAGATTGGCTGGTACTaGTGCTGTTGGAGGTGCCACGAAGTTGGTGCCCCCAATCAGGCT +
Preference number: 5 (lower is better)
Translates to: VTQATADGCSKIGWY*CCWRCHEVGAPNQA
Trigger: AGCCTGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 90 bp AGATGGAGCCCACTGCTTTGGGGGCCACATATGATCCTGACAGGGTaGCCACGCCACTGGTCAGGTCAAAGAGGTCACTCAGGCCACTGC +
Preference number: 5 (lower is better)
Translates to: RWSPLLWGPHMILTG*PRHWSGQRGHSGHC
Trigger: GCAGTGGCCTGAGTGACCTCTTTGACCTGACCAGTGGCGTGGGCACCCTGTCAGGATCATATGTGGCCCCCAAAGCAGTGGGCTCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317368.11
CDS GCA 90 bp TGGCCCTCCACGTTCCTCTTGGCGACAGTGAAGATGTTGCTGCTCTaGAGCTTGCTGCTCGCAGCCTCTGCATTGAGGGGGCAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: WPSTFLLATVKMLLL*SLLLAASALRGQSL
Trigger: CAGAGACTGCCCCCTCAATGCAGAGGCTGCGAGCAGCAAGCTGCAGAGCAGCAACATCTTCACTGTCGCCAAGAGGAACGTGGAGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000482818.1
CDS GCA 90 bp GCCGATGGGTGCTCCAAGATTGGCTGGTACTGCTGCTGTTGGAGGTaGCACGAAGTTGGTGCCCCCAATCCCTTCAGGCTCATCCCCCAT +
Preference number: 5 (lower is better)
Translates to: ADGCSKIGWYCCCWR*HEVGAPNPFRLIPH
Trigger: ATGGGGGATGAGCCTGAAGGGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS GCA 90 bp ACTCAGGCCACTGCCGATGGGTGCTCCAAGATTGGCTGGTACTGCTaGTGTTGGAGGTGCCACGAAGTTGGTGCCCCCAATCCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: TQATADGCSKIGWYC*CWRCHEVGAPNPFR
Trigger: CCTGAAGGGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS GCA 90 bp GTCACTCAGGCCACTGCCGATGGGTGCTCCAAGATTGGCTGGTACTaGTGCTGTTGGAGGTGCCACGAAGTTGGTGCCCCCAATCCCTTC +
Preference number: 5 (lower is better)
Translates to: VTQATADGCSKIGWY*CCWRCHEVGAPNPF
Trigger: GAAGGGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS GCA 90 bp TGGATGGCAAAGTCGGTCATGACCTGCAAGGCCTTGTTGGTCAGCTaGAGGTCCATGGAGATGGAGCCCACCTGGCGGGTGAAGGTGCCT +
Preference number: 5 (lower is better)
Translates to: WMAKSVMTCKALLVS*RSMEMEPTWRVKVP
Trigger: AGGCACCTTCACCCGCCAGGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 90 bp GTCGTGGAGCTTGGCCACGCACACAGCTGCTGTCTTGCGCACATATaGATCCTCGTCCTTCAGGCACTTCCGGAGTGGCTCGCACAGGTA +
Preference number: 5 (lower is better)
Translates to: VVELGHAHSCCLAHI*ILVLQALPEWLAQV
Trigger: TACCTGTGCGAGCCACTCCGGAAGTGCCTGAAGGACGAGGATCCATATGTGCGCAAGACAGCAGCTGTGTGCGTGGCCAAGCTCCACGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS CCA 90 bp GGTCAAAGAGGTCACTCAGGCCACTGCCGATGGGTGCTCCAAGATTaGCTGGTACTGCTGCTGTTGGAGGTGCCACGAAGTTGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: GQRGHSGHCRWVLQD*LVLLLLEVPRSWCP
Trigger: GGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACCTCTTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 90 bp CCACGCCACTGGTCAGGTCAAAGAGGTCACTCAGGCCACTGCCGATaGGTGCTCCAAGATTGGCTGGTACTGCTGCTGTTGGAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: PRHWSGQRGHSGHCR*VLQDWLVLLLLEVP
Trigger: TGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACCTCTTTGACCTGACCAGTGGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 90 bp GCCACTGCCGATGGGTGCTCCAAGATTGGCTGGTACTGCTGCTGTTaGAGGTGCCACGAAGTTGGTGCCCCCAATCCCTTCAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: ATADGCSKIGWYCCC*RCHEVGAPNPFRLI
Trigger: GATGAGCCTGAAGGGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS CCA 90 bp AAGGCCTTGTTGGTCAGCTGCAGGTCCATGGAGATGGAGCCCACCTaGCGGGTGAAGGTGCCTGAGATCTCCAGCCCCTTAGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: KALLVSCRSMEMEPT*RVKVPEISSPLAFM
Trigger: CATGAAGGCTAAGGGGCTGGAGATCTCAGGCACCTTCACCCGCCAGGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS-3UTR CAA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTTCTTCAGCTCCAGGTaGTCCGTCTGCATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGFFSSR*SVCMQL
Trigger: CAACTGCATGCAGACGGACAACCTGGAGCTGAAGAA...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCACACAGCTGCTGTCTaGCGCACATATGGATCCTCG +
Preference number: 5 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVHTAAV*RTYGSS
Trigger: CGAGGATCCATATGTGCGCAAGACAGCAGCTGTGTG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTTCTGCACGATGAGATaGATGTTGCGCAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGFCTMR*MLRRAT
Trigger: TGTGGCCCTGCGCAACATCAATCTCATCGTGCAGAA...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGCCTAGCTCTGCCCCTCTGCCGGCACCTACAGCTCCTTGAGCCCCAGGCCCTACCACATCCACTTCTGTaGCGTACTCTTTCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: SLALPLCRHLQLLEPQALPHPLL*RTLSAL
Trigger: CAGAGCTGAAAGAGTACGCAACAGAAGTGGATGTGG...TAGGGCCTGGGGCTCAAGGAGCTGTAGGTGCCGGCAGAGGGGCAGAGCTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTACAGCGCTCCGCAGATaGCTCCACCTTGATGGCGCA +
Preference number: 5 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLTALRR*LHLDGA
Trigger: TGCGCCATCAAGGTGGAGCAATCTGCGGAGCGCTGT...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCCGGGGCTGTGAGCCGGAGGGGCAAGCTCCACACTCACCCTTCAGGCACAGCTATCACACTCTCATACTaGTTGGGGTACTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: AGAVSRRGKLHTHPSGTAITLSY*LGYLRK
Trigger: CTTCCGCAAGTACCCCAACAAGTATGAGAGTGTGAT...AGCTGTGCCTGAAGGGTGAGTGTGGAGCTTGCCCCTCCGGCTCACAGCCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGGAGGCCGCTCCTGGGTCTCTGTaGGCTTCTTTAGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: AHPLTQPHLSAQSLWQEAAPGSL*ASLERV
Trigger: AACTCTTTCTAAAGAAGCCAACAGAGACCCAGGAGC...GGCCTCCTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCATGGGTGCTCCAAGATaGGCTGGTACTGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAMGAPR*AGTAAV
Trigger: AACAGCAGCAGTACCAGCCAATCTTGGAGCACCCAT...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp ACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCACCAAAGCTGTTGCGGTaGAACTGGATGGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: TGGAPAYPAPSLGPVFVAPKLLR*NWMAKS
Trigger: CGACTTTGCCATCCAGTTCAACCGCAACAGCTTTGG...TGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCAACGGCCACCTGGAGGTaGTTCAGAGGCTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: PTSLNPTSQPQEQGCPRATATWR*FRGSIF
Trigger: GAAGATGGAGCCTCTGAACAACCTCCAGGTGGCCGT...TGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCTCGCAGCCTCTGCATaGAGGGGGCAGTCTCTGATC +
Preference number: 5 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLLAASA*RGQSLI
Trigger: GATCAGAGACTGCCCCCTCAATGCAGAGGCTGCGAG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp ACCCAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGCGACAGTGAAGATGTaGCTGCTCTGCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TQTGGAPAYPAPSLGPVFATVKM*LLCSLL
Trigger: CAGCAAGCTGCAGAGCAGCAACATCTTCACTGTCGC...AAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACAGCTTCTGCCTGGTCTaGACCATGTGGGTCAGCACT +
Preference number: 5 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHSFCLV*TMWVST
Trigger: AGTGCTGACCCACATGGTCAAGACCAGGCAGAAGCT...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS GCA 90 bp GCCACTGGTCAGGTCAAAGAGGTCACTCAGGCCACTGCCGATGGGTaGTCCAAGATTGGCTGGTACTGCTGCTGTTGGAGGTGCCACGAA +
Preference number: 5 (lower is better)
Translates to: ATGQVKEVTQATADG*SKIGWYCCCWRCHE
Trigger: TTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACCTCTTTGACCTGACCAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 90 bp CAAGATTGGCTGGTACTGCTGCTGTTGGAGGTGCCACGAAGTTGGTaGCCCCAATCCCTTCAGGCTCATCCCCCATCAGGCTGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: QDWLVLLLLEVPRSW*PQSLQAHPPSGCQG
Trigger: GCCTTGACAGCCTGATGGGGGATGAGCCTGAAGGGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS CCA 90 bp TCTAAAGCACTGGTTCTGCAGGGTGCAGTTAGGAAGTGGGAACAATaGAGTTCCGCAGGTCAGCAGCAGCCCACGGGCCCTCCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: SKALVLQGAVRKWEQ*SSAGQQQPTGPPGL
Trigger: GAGACCTGGAGGGCCCGTGGGCTGCTGCTGACCTGCGGAACTCCATTGTTCCCACTTCCTAACTGCACCCTGCAGAACCAGTGCTTTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 90 bp CCCATCCACTCTAAAGCACTGGTTCTGCAGGGTGCAGTTAGGAAGTaGGAACAATGGAGTTCCGCAGGTCAGCAGCAGCCCACGGGCCCT +
Preference number: 5 (lower is better)
Translates to: PIHSKALVLQGAVRK*EQWSSAGQQQPTGP
Trigger: AGGGCCCGTGGGCTGCTGCTGACCTGCGGAACTCCATTGTTCCCACTTCCTAACTGCACCCTGCAGAACCAGTGCTTTAGAGTGGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS-3UTR CAA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGTTCTTCAGCTCCAGGTaGTCCGTCTGCATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGFFSSR*SVCMQL
Trigger: CAACTGCATGCAGACGGACAACCTGGAGCTGAAGAA...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGAGGTACTCTGTGATCTaGTCAACGCGGATGCAGCCC +
Preference number: 5 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLRYSVI*STRMQP
Trigger: GGGCTGCATCCGCGTTGACAAGATCACAGAGTACCT...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGTCCACCAGCTGGGCGTaGATGTCGTGGAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQSTSWA*MSWSLA
Trigger: GGCCAAGCTCCACGACATCAACGCCCAGCTGGTGGA...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GAGGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGTTCTGCACGATGAGATaGATGTTGCGCAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: EVAVEGPLTPTGETKEPGFCTMR*MLRRAT
Trigger: TGTGGCCCTGCGCAACATCAATCTCATCGTGCAGAA...CCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCCCACATCCACTTCTGTaGCGTACTCTTTCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGPHPLL*RTLSAL
Trigger: CAGAGCTGAAAGAGTACGCAACAGAAGTGGATGTGG...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGGCAGATCACACTCTCATACTaGTTGGGGTACTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: QEAHPLTQPHLSAQSLWQITLSY*LGYLRK
Trigger: CTTCCGCAAGTACCCCAACAAGTATGAGAGTGTGAT...CTGCCACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTAGCAGCTCATCTGCGTaGTCGATCCGTTCCGCGTAC +
Preference number: 5 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLSSSSA*SIRSAY
Trigger: GTACGCGGAACGGATCGACAACGCAGATGAGCTGCT...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCTGGTACTGCTGCTGTaGGAGGTGCCACGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLLVLLL*EVPRSW
Trigger: CCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCGAGACAGGGGCTCTGGGAGCTTCTGCCTGGTCTTGACCATGTGGGTCAGCACCCAAAGCTGTTGCGGTaGAACTGGATGGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: PRQGLWELLPGLDHVGQHPKLLR*NWMAKS
Trigger: CGACTTTGCCATCCAGTTCAACCGCAACAGCTTTGG...GTGCTGACCCACATGGTCAAGACCAGGCAGAAGCTCCCAGAGCCCCTGTCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGATCTCCACTGTCTGGTaGGGGCTGAGTGGCGCGTGG +
Preference number: 5 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQISTVW*GLSGAW
Trigger: CCACGCGCCACTCAGCCCCAACCAGACAGTGGAGAT...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACCCCTCCACGTTCCTCTaGGCGACAGTGAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHPSTFL*ATVKML
Trigger: CAACATCTTCACTGTCGCCAAGAGGAACGTGGAGGG...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCTGGCTCTGTTTCCTTaGGTCCCCACCTCACTTAAC +
Preference number: 5 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVLALFP*VPTSLN
Trigger: GTTAAGTGAGGTGGGGACCAAAGGAAACAGAGCCAG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS CCA 90 bp AAAGAGGTCACTCAGGCCACTGCCGATGGGTGCTCCAAGATTGGCTaGTACTGCTGCTGTTGGAGGTGCCACGAAGTTGGTGCCCCCAAT +
Preference number: 5 (lower is better)
Translates to: KEVTQATADGCSKIG*YCCCWRCHEVGAPN
Trigger: ATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACCTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 90 bp CTCCAAGATTGGCTGGTACTGCTGCTGTTGGAGGTGCCACGAAGTTaGTGCCCCCAATCCCTTCAGGCTCATCCCCCATCAGGCTGTCAA +
Preference number: 5 (lower is better)
Translates to: LQDWLVLLLLEVPRS*CPQSLQAHPPSGCQ
Trigger: TTGACAGCCTGATGGGGGATGAGCCTGAAGGGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS-3UTR CAA 90 bp TTCTGCCTGGTCTTGACCATGTGGGTCAGCACTCGGGAGGCTGTGGCCCAACTGTTCTGCACGATGAGATaGATGTTGCGCAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: FCLVLTMWVSTREAVAQLFCTMR*MLRRAT
Trigger: TGTGGCCCTGCGCAACATCAATCTCATCGTGCAGAA...CAGTTGGGCCACAGCCTCCCGAGTGCTGACCCACATGGTCAAGACCAGGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CAAACAGGAGGCGCACCCGCTTACCCAGCCCCATCTCTCGGCCCAGTCTTTGTGCCACATCCACTTCTGTaGCGTACTCTTTCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: QTGGAPAYPAPSLGPVFVPHPLL*RTLSAL
Trigger: CAGAGCTGAAAGAGTACGCAACAGAAGTGGATGTGG...CACAAAGACTGGGCCGAGAGATGGGGCTGGGTAAGCGGGTGCGCCTCCTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGTGGCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCATCACACTCTCATACTaGTTGGGGTACTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GGSGGPFNTNRRDQGARGITLSY*LGYLRK
Trigger: CTTCCGCAAGTACCCCAACAAGTATGAGAGTGTGAT...GCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp AGGGATCGGGTGGGTTCTGCCATCAGGACCAGGGAGCCCACTGAGTGGCCTGGAGCTCCTGGGTCTCTGTaGGCTTCTTTAGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: RDRVGSAIRTREPTEWPGAPGSL*ASLERV
Trigger: AACTCTTTCTAAAGAAGCCAACAGAGACCCAGGAGC...TCCAGGCCACTCAGTGGGCTCCCTGGTCCTGATGGCAGAACCCACCCGATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GCAGTGGAGGGCCCTTTAACACCAACCGGAGAGACCAAGGAGCCAGGGGCTGCCGCTCCTGGGTCTCTGTaGGCTTCTTTAGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: AVEGPLTPTGETKEPGAAAPGSL*ASLERV
Trigger: AACTCTTTCTAAAGAAGCCAACAGAGACCCAGGAGC...GGCAGCCCCTGGCTCCTTGGTCTCTCCGGTTGGTGTTAAAGGGCCCTCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGGGGTGTCCCAGAGCACCCAAAGCTGTTGCGGTaGAACTGGATGGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: PPHLTPHHSHRSRGVPEHPKLLR*NWMAKS
Trigger: CGACTTTGCCATCCAGTTCAACCGCAACAGCTTTGG...GTGCTCTGGGACACCCCTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTCCCTCCACGTTCCTCTaGGCGACAGTGAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLPSTFL*ATVKML
Trigger: CAACATCTTCACTGTCGCCAAGAGGAACGTGGAGGG...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS TCA 90 bp GCTGGGGCACCTGATGGGGCAATCTGCTGGAACACTCCTGGGCAGTaGATATACACAGACTCCCTAGGAGAATGGGATTCTGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AGAPDGAICWNTPGQ*IYTDSLGEWDSASC
Trigger: GCAGGAGGCAGAATCCCATTCTCCTAGGGAGTCTGTGTATATTCACTGCCCAGGAGTGTTCCAGCAGATTGCCCCATCAGGTGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415756.1
CDS GCA 90 bp TGGATGGCAAAGTCGGTCATGACCTGCAAGGCCTTGTTGGTCAGCTaGAGGTCCATGGAGATGGAGCCCACTGCTTTGGGGGCCACATAT +
Preference number: 5 (lower is better)
Translates to: WMAKSVMTCKALLVS*RSMEMEPTALGATY
Trigger: ATATGTGGCCCCCAAAGCAGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317368.11
CDS GCA 90 bp CCAAAGCTGTTGCGGTTGAACTGGATGGCAAAGTCGGTCATGACCTaGAAGGCCTTGTTGGTCAGCTGCAGGTCCATGGAGATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PKLLRLNWMAKSVMT*KALLVSCRSMEMEP
Trigger: GGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCAGTTCAACCGCAACAGCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 90 bp CAGGGCCAGGGCCTGTGCCCAGCAATGTCACTTCCCAGTCAGGGGTaGCAAACCAACTGCACCACCTTACAGGGCCCAATTTTACACAAT +
Preference number: 5 (lower is better)
Translates to: QGQGLCPAMSLPSQG*QTNCTTLQGPILHN
Trigger: ATTGTGTAAAATTGGGCCCTGTAAGGTGGTGCAGTTGGTTTGGCACCCCTGACTGGGAAGTGACATTGCTGGGCACAGGCCCTGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS GCA 90 bp AGGGCGGACGGGGAAAGAGAAAGCGATCTGCTAACCTCTAAGTCCTaGACCACGGGAACCAGCAGGGAAGGTGACATGCAGCAACCAAAC +
Preference number: 5 (lower is better)
Translates to: RADGERESDLLTSKS*TTGTSREGDMQQPN
Trigger: GTTTGGTTGCTGCATGTCACCTTCCCTGCTGGTTCCCGTGGTGCAGGACTTAGAGGTTAGCAGATCGCTTTCTCTTTCCCCGTCCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 90 bp TGTCTTGCGCACATATGGATCCTCGTCCTTCAGGCACTTCCGGAGTaGCTCGCACAGGTACTCTGTGATCTTGTCAACGCGGATGCAGCC +
Preference number: 5 (lower is better)
Translates to: CLAHIWILVLQALPE*LAQVLCDLVNADAA
Trigger: GGCTGCATCCGCGTTGACAAGATCACAGAGTACCTGTGCGAGCCACTCCGGAAGTGCCTGAAGGACGAGGATCCATATGTGCGCAAGACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS-3UTR CAA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGTTGATGTCGTGGAGCTaGGCCACGCACACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQLMSWS*ATHTAA
Trigger: AGCAGCTGTGTGCGTGGCCAAGCTCCACGACATCAA...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGCTGGTACTGCTGCTGTaGGAGGTGCCACGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQLVLLL*EVPRSW
Trigger: CCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAG...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp GGCCTGGGCTCAGAGGCGACACTGAGGAATGTATCACAGGCAGTGACCACCCTTATGGGTGCTCCAAGATaGGCTGGTACTGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: GLGSEATLRNVSQAVTTLMGAPR*AGTAAV
Trigger: AACAGCAGCAGTACCAGCCAATCTTGGAGCACCCAT...AAGGGTGGTCACTGCCTGTGATACATTCCTCAGTGTCGCCTCTGAGCCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS CCA 90 bp TTGCCCTGTCCTGCCCTCAAGGAGCTCTGTCTAATGCCAGGGGCCTaGAGTATAAGCTGCTTCTACCTTGAAAACTCTGGGACCACCCAA +
Preference number: 5 (lower is better)
Translates to: LPCPALKELCLMPGA*SISCFYLENSGTTQ
Trigger: TTGGGTGGTCCCAGAGTTTTCAAGGTAGAAGCAGCTTATACTCCAGGCCCCTGGCATTAGACAGAGCTCCTTGAGGGCAGGACAGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS-3UTR CAA 90 bp CTGTTTCCTTTGGTCCCCACCTCACTTAACCCCACATCACAGCCACAGGAGCAGTTCTGCACGATGAGATaGATGTTGCGCAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: LFPLVPTSLNPTSQPQEQFCTMR*MLRRAT
Trigger: TGTGGCCCTGCGCAACATCAATCTCATCGTGCAGAA...CTGCTCCTGTGGCTGTGATGTGGGGTTAAGTGAGGTGGGGACCAAAGGAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS GCA 90 bp AATAGCACGCACAGCCTTCCGTACAAAGTCCACATCCACTTCTGTTaGGTACTCTTTCAGCTCTGCCAACACCTGGGCGATGTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: NSTHSLPYKVHIHFC*VLFQLCQHLGDVGL
Trigger: CAGGCCAACATCGCCCAGGTGTTGGCAGAGCTGAAAGAGTACGCAACAGAAGTGGATGTGGACTTTGTACGGAAGGCTGTGCGTGCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS GCA 90 bp CTGTGCCCAGCAATGTCACTTCCCAGTCAGGGGTGCCAAACCAACTaGACCACCTTACAGGGCCCAATTTTACACAATCTTCTAGTCCAA +
Preference number: 5 (lower is better)
Translates to: LCPAMSLPSQGCQTN*TTLQGPILHNLLVQ
Trigger: TTGGACTAGAAGATTGTGTAAAATTGGGCCCTGTAAGGTGGTGCAGTTGGTTTGGCACCCCTGACTGGGAAGTGACATTGCTGGGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS-3UTR CAA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCGGAGGTGCCACGAAGTaGGTGCCCCCAATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTGGATK*VPPIRL
Trigger: CAGCCTGATTGGGGGCACCAACTTCGTGGCACCTCC...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCATCTCCACTGTCTGGTaGGGGCTGAGTGGCGCGTGG +
Preference number: 5 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTISTVW*GLSGAW
Trigger: CCACGCGCCACTCAGCCCCAACCAGACAGTGGAGAT...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS-3UTR CAA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCGCCAGGCCAAAGCTGTaGCGGTTGAACTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTARPKL*RLNWMA
Trigger: TGCCATCCAGTTCAACCGCAACAGCTTTGGCCTGGC...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS CCA 90 bp GAGACCCAATTGGTGTCTTATCTGGGTAACCTGACGGGGTTGATTTaGAAGCTTTCTAGAAAGGTCCTTCTCAGGGACCAAACTGATTCT +
Preference number: 5 (lower is better)
Translates to: ETQLVSYLGNLTGLI*KLSRKVLLRDQTDS
Trigger: AGAATCAGTTTGGTCCCTGAGAAGGACCTTTCTAGAAAGCTTCCAAATCAACCCCGTCAGGTTACCCAGATAAGACACCAATTGGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS-3UTR CAA 90 bp CTGATGATATATATTAGATCTAGTTACCGTAGGGTCAGAAAACCATCCCCAACCATGGGTGCTCCAAGATaGGCTGGTACTGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LMIYIRSSYRRVRKPSPTMGAPR*AGTAAV
Trigger: AACAGCAGCAGTACCAGCCAATCTTGGAGCACCCAT...GGTTGGGGATGGTTTTCTGACCCTACGGTAACTAGATCTAATATATATCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS GCA 72 bp CAAAATGTCCGCGGCCTCCACCTCTCGCTCTCCCGGTaGGTCCGGGCTGCCGGCGGCTCGGAGCCCCGCGGC +
Preference number: 6 (lower is better)
Translates to: QNVRGLHLSLSR*VRAAGGSEPRG
Trigger: GCCGCGGGGCTCCGAGCCGCCGGCAGCCCGGACGCACCGGGAGAGCGAGAGGTGGAGGCCGCGGACATTTTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS GCA 72 bp TCCAAGGCTGCAGGGCGGGTGCCGGGGCTCTCACCGTaGAGCTGGGGTTGCCCGGCTGGATCCGCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: SKAAGRVPGLSP*SWGCPAGSAAP
Trigger: CGGAGCTGCGGATCCAGCCGGGCAACCCCAGCTGCACGGTGAGAGCCCCGGCACCCGCCCTGCAGCCTTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 72 bp GCCGGGGCTCTCACCGTGCAGCTGGGGTTGCCCGGCTaGATCCGCAGCTCCGCCAGCACCCAGATGCCGTTG +
Preference number: 6 (lower is better)
Translates to: AGALTVQLGLPG*IRSSASTQMPL
Trigger: CAACGGCATCTGGGTGCTGGCGGAGCTGCGGATCCAGCCGGGCAACCCCAGCTGCACGGTGAGAGCCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CAA 90 bp AGGCCGCAGGTCCCAATAGCTCCCGGCGCCCCGGCTCGGTTCGGCTaGGCACCAAAATGTCCGCGGCCTCCACCTCTCGCTCTCCCGGTG +
Preference number: 6 (lower is better)
Translates to: RPQVPIAPGAPARFG*APKCPRPPPLALPV
Trigger: CACCGGGAGAGCGAGAGGTGGAGGCCGCGGACATTTTGGTGCCAAGCCGAACCGAGCCGGGGCGCCGGGAGCTATTGGGACCTGCGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473606.1
CDS CAA 90 bp CTTCCGCAGGTCCCAATAGCTCCCGGCGCCCCGGCTCGGTTCGGCTaGGCACCAAAATGTCCGCGGCCTCCACCTCTCGCTCTCCCGGTG +
Preference number: 6 (lower is better)
Translates to: LPQVPIAPGAPARFG*APKCPRPPPLALPV
Trigger: CACCGGGAGAGCGAGAGGTGGAGGCCGCGGACATTTTGGTGCCAAGCCGAACCGAGCCGGGGCGCCGGGAGCTATTGGGACCTGCGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
CDS TCA 72 bp CACACAGCCTGGCGGCAGCTGCGCCTGGCACAGATGTaGGGTAAAGCGGAGGGGGCGGCTGTCGCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: HTAWRQLRLAQM*GKAEGAAVAAS
Trigger: GCTGGCTGCGACAGCCGCCCCCTCCGCTTTACCTCACATCTGTGCCAGGCGCAGCTGCCGCCAGGCTGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 72 bp CCCACCGTGCTGAGAGGCAGGGAGATCTCCACTGTCTaGTTGGGGCTGAGTGGCGCGTGGACCTGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: PTVLRGREISTV*LGLSGAWTWRG
Trigger: CCCCCTCCAGGTCCACGCGCCACTCAGCCCCAACCAGACAGTGGAGATCTCCCTGCCTCTCAGCACGGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
ENST00000482818.1
CDS CCA 72 bp CACTTCAGGGACAGCGTGCAGCTGGGGTTGCCCGGCTaGATCCGCAGCTCCGCCAGCACCCAGATGCCGTTG +
Preference number: 6 (lower is better)
Translates to: HFRDSVQLGLPG*IRSSASTQMPL
Trigger: CAACGGCATCTGGGTGCTGGCGGAGCTGCGGATCCAGCCGGGCAACCCCAGCTGCACGCTGTCCCTGAAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS CCA 72 bp GGGGTGGGGAAGAGAGCAGGAACCAATGGGACAGCGTaGAGTGCACACAGCCTGGCGGCAGCTGCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: GVGKRAGTNGTA*SAHSLAAAAPG
Trigger: GCCAGGCGCAGCTGCCGCCAGGCTGTGTGCACTCCACGCTGTCCCATTGGTTCCTGCTCTCTTCCCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CAA 72 bp GTCCCAATAGCTCCCGGCGCCCCGGCTCGGTTCGGCTaGGCACCAAAATGTCCGCGGCCTCCACCTCTCGCT +
Preference number: 6 (lower is better)
Translates to: VPIAPGAPARFG*APKCPRPPPLA
Trigger: AGCGAGAGGTGGAGGCCGCGGACATTTTGGTGCCAAGCCGAACCGAGCCGGGGCGCCGGGAGCTATTGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000473606.1
CDS GCA 72 bp TCAAGGCCACCGCCAAGAAGGTCCACAGCTCCCATCTaGACCGAGGAGGTGGCCAGGGGTGGGCCGCTCACT +
Preference number: 6 (lower is better)
Translates to: SRPPPRRSTAPI*TEEVARGGPLT
Trigger: AGTGAGCGGCCCACCCCTGGCCACCTCCTCGGTGCAGATGGGAGCTGTGGACCTTCTTGGCGGTGGCCTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 72 bp CAGGCTCCTGGGAACCACTGTCCTCCCAGCTGGACATaGAGGCACTCACAGGACAGGGCCAGGGCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: QAPGNHCPPSWT*RHSQDRARACA
Trigger: GGCACAGGCCCTGGCCCTGTCCTGTGAGTGCCTGCATGTCCAGCTGGGAGGACAGTGGTTCCCAGGAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 72 bp CAGCCAACACCACCTCCTTGGCTGCCACCGGGTCCGTaGACAGCAGGCGCCAGTAGATGTAGCCACGGTCCC +
Preference number: 6 (lower is better)
Translates to: QPTPPPWLPPGP*TAGASRCSHGP
Trigger: GGGACCGTGGCTACATCTACTGGCGCCTGCTGTCCACGGACCCGGTGGCAGCCAAGGAGGTGGTGTTGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS CCA 72 bp AGGTCCAGGTTGAGGAGGTCACCCAGCAGGTCGCCCTaGGCGGGGATGACATCTGGCTGCTCCCCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: RSRLRRSPSRSP*AGMTSGCSPGG
Trigger: ACCTCCTGGGGAGCAGCCAGATGTCATCCCCGCCCAGGGCGACCTGCTGGGTGACCTCCTCAACCTGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 72 bp GACAGCTCTAAGTCCGTGCAGCTGGGGTTGCCCGGCTaGATCCGCAGCTCCGCCAGCACCCAGATGCCGTTG +
Preference number: 6 (lower is better)
Translates to: DSSKSVQLGLPG*IRSSASTQMPL
Trigger: CAACGGCATCTGGGTGCTGGCGGAGCTGCGGATCCAGCCGGGCAACCCCAGCTGCACGGACTTAGAGCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS GCA 72 bp GATCTTGTCAACGCGGATGCAGCCCATGGTCCGCACTaGCAGGGCTCGGATGAGGGGGTTGGGGTCCTCACA +
Preference number: 6 (lower is better)
Translates to: DLVNADAAHGPH*QGSDEGVGVLT
Trigger: TGTGAGGACCCCAACCCCCTCATCCGAGCCCTGGCAGTGCGGACCATGGGCTGCATCCGCGTTGACAAGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS GCA 72 bp GAGCTGGGGCTGTGGTTGGCAGGGAGCCTCTCACCGTaGCAGCCTTCCCATGTTCTGGACCCTGGACAGAAG +
Preference number: 6 (lower is better)
Translates to: ELGLWLAGSLSP*QPSHVLDPGQK
Trigger: CTTCTGTCCAGGGTCCAGAACATGGGAAGGCTGGCACGGTGAGAGGCTCCCTGCCAACCACAGCCCCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 72 bp GGTCTCGTAGGCCTGGTACACGTGCTGGGACACCTCTaGTGCTCGACACTTCAGGGACAGCGTGCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: GLVGLVHVLGHL*CSTLQGQRAAG
Trigger: CCCAGCTGCACGCTGTCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAGCACGTGTACCAGGCCTACGAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
CDS CCA 72 bp GGCCACCTAGGCACAAGGGGGTCCCCAGTCAGTCTCTaGGGCTTGACGCCACCTCTGGAGGTTGTTCAGAGG +
Preference number: 6 (lower is better)
Translates to: GHLGTRGSPVSL*GLTPPLEVVQR
Trigger: CCTCTGAACAACCTCCAGAGGTGGCGTCAAGCCCCAGAGACTGACTGGGGACCCCCTTGTGCCTAGGTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472057.1
CDS CAA 90 bp TCCTTCAGGCACTTCCGGAGTGGCTCGCACAGGTACTCTGTGATCTaGTCAACGCGGATGCAGCCCATGGTCCGCACTGCCAGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: SFRHFRSGSHRYSVI*STRMQPMVRTARAR
Trigger: CCGAGCCCTGGCAGTGCGGACCATGGGCTGCATCCGCGTTGACAAGATCACAGAGTACCTGTGCGAGCCACTCCGGAAGTGCCTGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS TCA 72 bp CATGGAGATGGAGCCCACCTGGCGGGTGAAGGTGCCTaGGATCTCCAGCCCCTTAGCCTTCATGGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: HGDGAHLAGEGA*DLQPLSLHGWE
Trigger: CTCCCAGCCATGAAGGCTAAGGGGCTGGAGATCTCAGGCACCTTCACCCGCCAGGTGGGCTCCATCTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 72 bp GCCACTGCCGATGGGTGCTCCAAGATTGGCTGGTACTaGTGCTGTTGGAGGTGCCACGAAGTTGGTGCCCCC +
Preference number: 6 (lower is better)
Translates to: ATADGCSKIGWY*CCWRCHEVGAP
Trigger: GGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 72 bp GACATGCAGGCACTCACAGGACAGGGCCAGGGCCTGTaGCCAGCAATGTCACTTCCCAGTCAGGGGTGCCAA +
Preference number: 6 (lower is better)
Translates to: DMQALTGQGQGL*PAMSLPSQGCQ
Trigger: TTGGCACCCCTGACTGGGAAGTGACATTGCTGGGCACAGGCCCTGGCCCTGTCCTGTGAGTGCCTGCATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 72 bp GCGGCGGGGGCCAGGCCAAAGCTGTTGCGGTTGAACTaGATGGCAAAGTCGGTCATGACCTGCAAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: AAGARPKLLRLN*MAKSVMTCKAL
Trigger: CAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCAGTTCAACCGCAACAGCTTTGGCCTGGCCCCCGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 72 bp AAAGCGGAGGGGGCGGCTGTCGCAGCCAGCCGGGTGTaGACCAAATATACTTGCAGCCCACACACCTGCTGT +
Preference number: 6 (lower is better)
Translates to: KAEGAAVAASRV*TKYTCSPHTCC
Trigger: ACAGCAGGTGTGTGGGCTGCAAGTATATTTGGTCCACACCCGGCTGGCTGCGACAGCCGCCCCCTCCGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CAA 72 bp ACGGTAGAGACTTTGCCTCCGCTCTGGGGCCTGAGCTaGAGATCACAGGCAGAGGAGAGAGGAGCCCCCACC +
Preference number: 6 (lower is better)
Translates to: TVETLPPLWGLS*RSQAEERGAPT
Trigger: GGTGGGGGCTCCTCTCTCCTCTGCCTGTGATCTCAAGCTCAGGCCCCAGAGCGGAGGCAAAGTCTCTACCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CAA 90 bp TCTTTAAGGGTGTCCAGGAAGCCCTGGTCCTCCACCAGCTGGGCGTaGATGTCGTGGAGCTTGGCCACGCACACAGCTGCTGTCTTGCGC +
Preference number: 6 (lower is better)
Translates to: SLRVSRKPWSSTSWA*MSWSLATHTAAVLR
Trigger: GCGCAAGACAGCAGCTGTGTGCGTGGCCAAGCTCCACGACATCAACGCCCAGCTGGTGGAGGACCAGGGCTTCCTGGACACCCTTAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS CAA 90 bp GGCCACTGCCGATGGGTGCTCCAAGATTGGCTGGTACTGCTGCTGTaGGAGGTGCCACGAAGTTGGTGCCCCCAATCAGGCTGTCAAGGC +
Preference number: 6 (lower is better)
Translates to: GHCRWVLQDWLVLLL*EVPRSWCPQSGCQG
Trigger: GCCTTGACAGCCTGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 72 bp CTGGTACTGCTGCTGTTGGAGGTGCCACGAAGTTGGTaGCCCCAATCCCTTCAGGCTCATCCCCCATCAGGC +
Preference number: 6 (lower is better)
Translates to: LVLLLLEVPRSW*PQSLQAHPPSG
Trigger: GCCTGATGGGGGATGAGCCTGAAGGGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS GCA 72 bp AAGTCGGTCATGACCTGCAAGGCCTTGTTGGTCAGCTaGAGGTCCATGGAGATGGAGCCCACCTGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: KSVMTCKALLVS*RSMEMEPTWRV
Trigger: CACCCGCCAGGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 72 bp GGGCCACATATGATCCTGACAGGGTGCCCACGCCACTaGTCAGGTCAAAGAGGTCACTCAGGCCACTGCCGA +
Preference number: 6 (lower is better)
Translates to: GPHMILTGCPRH*SGQRGHSGHCR
Trigger: TCGGCAGTGGCCTGAGTGACCTCTTTGACCTGACCAGTGGCGTGGGCACCCTGTCAGGATCATATGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 72 bp TTGGTCAGCTGCAGGTCCATGGAGATGGAGCCCACCTaGCGGGTGAAGGTGCCTGAGATCTCCAGCCCCTTA +
Preference number: 6 (lower is better)
Translates to: LVSCRSMEMEPT*RVKVPEISSPL
Trigger: TAAGGGGCTGGAGATCTCAGGCACCTTCACCCGCCAGGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 72 bp CTGGTTCTGCAGGGTGCAGTTAGGAAGTGGGAACAATaGAGTTCCGCAGGTCAGCAGCAGCCCACGGGCCCT +
Preference number: 6 (lower is better)
Translates to: LVLQGAVRKWEQ*SSAGQQQPTGP
Trigger: AGGGCCCGTGGGCTGCTGCTGACCTGCGGAACTCCATTGTTCCCACTTCCTAACTGCACCCTGCAGAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CAA 72 bp TTGGCTGGTACTGCTGCTGTTGGAGGTGCCACGAAGTaGGTGCCCCCAATCAGGCTGTCAAGGCCACCGCCA +
Preference number: 6 (lower is better)
Translates to: LAGTAAVGGATK*VPPIRLSRPPP
Trigger: TGGCGGTGGCCTTGACAGCCTGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317368.11
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CAA 90 bp GGCCACTGCCGATGGGTGCTCCAAGATTGGCTGGTACTGCTGCTGTaGGAGGTGCCACGAAGTTGGTGCCCCCAATCCCTTCAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: GHCRWVLQDWLVLLL*EVPRSWCPQSLQAH
Trigger: ATGAGCCTGAAGGGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS CAA 90 bp CGGTTGAACTGGATGGCAAAGTCGGTCATGACCTGCAAGGCCTTGTaGGTCAGCTGCAGGTCCATGGAGATGGAGCCCACCTGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: RLNWMAKSVMTCKAL*VSCRSMEMEPTWRV
Trigger: CACCCGCCAGGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCAGTTCAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS TCA 72 bp TCAGGCACTTCCGGAGTGGCTCGCACAGGTACTCTGTaGTCTTGTCAACGCGGATGCAGCCCATGGTCCGCA +
Preference number: 6 (lower is better)
Translates to: SGTSGVARTGTL*SCQRGCSPWSA
Trigger: TGCGGACCATGGGCTGCATCCGCGTTGACAAGATCACAGAGTACCTGTGCGAGCCACTCCGGAAGTGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS TCA 72 bp CTCAGGGACCAAACTGATTCTAGTTCAAGCCAGGCTTaGAGGGACGCTTGGACCGCGTCCTCCACCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LRDQTDSSSSQA*RDAWTASSTRA
Trigger: GGCCCTGGTGGAGGACGCGGTCCAAGCGTCCCTTCAAGCCTGGCTTGAACTAGAATCAGTTTGGTCCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS GCA 72 bp CGCCACTGGTCAGGTCAAAGAGGTCACTCAGGCCACTaGCGATGGGTGCTCCAAGATTGGCTGGTACTGCTG +
Preference number: 6 (lower is better)
Translates to: RHWSGQRGHSGH*RWVLQDWLVLL
Trigger: CAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACCTCTTTGACCTGACCAGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 72 bp CTTGGCCACGCACACAGCTGCTGTCTTGCGCACATATaGATCCTCGTCCTTCAGGCACTTCCGGAGTGGCTC +
Preference number: 6 (lower is better)
Translates to: LGHAHSCCLAHI*ILVLQALPEWL
Trigger: GAGCCACTCCGGAAGTGCCTGAAGGACGAGGATCCATATGTGCGCAAGACAGCAGCTGTGTGCGTGGCCAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS CCA 72 bp GGTCACTCAGGCCACTGCCGATGGGTGCTCCAAGATTaGCTGGTACTGCTGCTGTTGGAGGTGCCACGAAGT +
Preference number: 6 (lower is better)
Translates to: GHSGHCRWVLQD*LVLLLLEVPRS
Trigger: ACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CAA 72 bp AGGTCACTCAGGCCACTGCCGATGGGTGCTCCAAGATaGGCTGGTACTGCTGCTGTTGGAGGTGCCACGAAG +
Preference number: 6 (lower is better)
Translates to: RSLRPLPMGAPR*AGTAAVGGATK
Trigger: CTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CAA 72 bp TGGCCCTCCACGTTCCTCTTGGCGACAGTGAAGATGTaGCTGCTCTGCAGCTTGCTGCTCGCAGCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: WPSTFLLATVKM*LLCSLLLAASA
Trigger: TGCAGAGGCTGCGAGCAGCAAGCTGCAGAGCAGCAACATCTTCACTGTCGCCAAGAGGAACGTGGAGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000482818.1
CDS CAA 72 bp TTGGCTGGTACTGCTGCTGTTGGAGGTGCCACGAAGTaGGTGCCCCCAATCCCTTCAGGCTCATCCCCCATC +
Preference number: 6 (lower is better)
Translates to: LAGTAAVGGATK*VPPIPSGSSPI
Trigger: GATGGGGGATGAGCCTGAAGGGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS CAA 90 bp AGGTCAAAGAGGTCACTCAGGCCACTGCCGATGGGTGCTCCAAGATaGGCTGGTACTGCTGCTGTTGGAGGTGCCACGAAGTTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: RSKRSLRPLPMGAPR*AGTAAVGGATKLVP
Trigger: GGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACCTCTTTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CAA 90 bp GCTCCAAGATTGGCTGGTACTGCTGCTGTTGGAGGTGCCACGAAGTaGGTGCCCCCAATCCCTTCAGGCTCATCCCCCATCAGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: APRLAGTAAVGGATK*VPPIPSGSSPIRLS
Trigger: TGACAGCCTGATGGGGGATGAGCCTGAAGGGATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357586.7
CDS CAA 90 bp TTGCGGTTGAACTGGATGGCAAAGTCGGTCATGACCTGCAAGGCCTaGTTGGTCAGCTGCAGGTCCATGGAGATGGAGCCCACCTGGCGG +
Preference number: 6 (lower is better)
Translates to: LRLNWMAKSVMTCKA*LVSCRSMEMEPTWR
Trigger: CCGCCAGGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCAGTTCAACCGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CAA 90 bp CGGTTGAACTGGATGGCAAAGTCGGTCATGACCTGCAAGGCCTTGTaGGTCAGCTGCAGGTCCATGGAGATGGAGCCCACTGCTTTGGGG +
Preference number: 6 (lower is better)
Translates to: RLNWMAKSVMTCKAL*VSCRSMEMEPTALG
Trigger: CCCCAAAGCAGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCAGTTCAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317368.11
CDS TCA 72 bp GCAGGTCTGGGTTATCTGAGTCCTGAGTGGCCAAACTaGGGACCTGCTGCACCAGCTCCTGGGTCTCTGTTG +
Preference number: 6 (lower is better)
Translates to: AGLGYLSPEWPN*GPAAPAPGSLL
Trigger: CAACAGAGACCCAGGAGCTGGTGCAGCAGGTCCTCAGTTTGGCCACTCAGGACTCAGATAACCCAGACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS GCA 72 bp ATGGAAGCCCTCGAGGAAGCTCTCCAGCAGCTCATCTaGGTTGTCGATCCGTTCCGCGTACTCGCCCACAAT +
Preference number: 6 (lower is better)
Translates to: MEALEEALQQLI*VVDPFRVLAHN
Trigger: ATTGTGGGCGAGTACGCGGAACGGATCGACAACGCAGATGAGCTGCTGGAGAGCTTCCTCGAGGGCTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS GCA 72 bp ACTGCCGATGGGTGCTCCAAGATTGGCTGGTACTGCTaGTGTTGGAGGTGCCACGAAGTTGGTGCCCCCAAT +
Preference number: 6 (lower is better)
Translates to: TADGCSKIGWYC*CWRCHEVGAPN
Trigger: ATTGGGGGCACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 72 bp CAGGTCAAAGAGGTCACTCAGGCCACTGCCGATGGGTaGTCCAAGATTGGCTGGTACTGCTGCTGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: QVKEVTQATADG*SKIGWYCCCWR
Trigger: CCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACCTCTTTGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 72 bp AAGTCGGTCATGACCTGCAAGGCCTTGTTGGTCAGCTaGAGGTCCATGGAGATGGAGCCCACTGCTTTGGGG +
Preference number: 6 (lower is better)
Translates to: KSVMTCKALLVS*RSMEMEPTALG
Trigger: CCCCAAAGCAGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317368.11
CDS GCA 72 bp ACGTTCCTCTTGGCGACAGTGAAGATGTTGCTGCTCTaGAGCTTGCTGCTCGCAGCCTCTGCATTGAGGGGG +
Preference number: 6 (lower is better)
Translates to: TFLLATVKMLLL*SLLLAASALRG
Trigger: CCCCCTCAATGCAGAGGCTGCGAGCAGCAAGCTGCAGAGCAGCAACATCTTCACTGTCGCCAAGAGGAACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000482818.1
CDS CCA 72 bp ACTCAGGCCACTGCCGATGGGTGCTCCAAGATTGGCTaGTACTGCTGCTGTTGGAGGTGCCACGAAGTTGGT +
Preference number: 6 (lower is better)
Translates to: TQATADGCSKIG*YCCCWRCHEVG
Trigger: ACCAACTTCGTGGCACCTCCAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CAA 72 bp TGGATGGCAAAGTCGGTCATGACCTGCAAGGCCTTGTaGGTCAGCTGCAGGTCCATGGAGATGGAGCCCACC +
Preference number: 6 (lower is better)
Translates to: WMAKSVMTCKAL*VSCRSMEMEPT
Trigger: GGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 72 bp AGTCCTGCACCACGGGAACCAGCAGGGAAGGTGACATaGAGCAACCAAACACAGGGAGACGGAAGTTACCAC +
Preference number: 6 (lower is better)
Translates to: SPAPREPAGKVT*SNQTQGDGSYH
Trigger: GTGGTAACTTCCGTCTCCCTGTGTTTGGTTGCTGCATGTCACCTTCCCTGCTGGTTCCCGTGGTGCAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 72 bp TGGTCAGGTCAAAGAGGTCACTCAGGCCACTGCCGATaGGTGCTCCAAGATTGGCTGGTACTGCTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: WSGQRGHSGHCR*VLQDWLVLLLL
Trigger: CAACAGCAGCAGTACCAGCCAATCTTGGAGCACCCATCGGCAGTGGCCTGAGTGACCTCTTTGACCTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CCA 72 bp AGGAAGGACTCTGTGCACACTGTGAATGTGTGGAAGTaGGGTGTCAGCACCTCAATCAGGGCCACCTGGCTG +
Preference number: 6 (lower is better)
Translates to: RKDSVHTVNVWK*GVSTSIRATWL
Trigger: CAGCCAGGTGGCCCTGATTGAGGTGCTGACACCCCACTTCCACACATTCACAGTGTGCACAGAGTCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CAA 72 bp ATGTCGTGGAGCTTGGCCACGCACACAGCTGCTGTCTaGCGCACATATGGATCCTCGTCCTTCAGGCACTTC +
Preference number: 6 (lower is better)
Translates to: MSWSLATHTAAV*RTYGSSSFRHF
Trigger: GAAGTGCCTGAAGGACGAGGATCCATATGTGCGCAAGACAGCAGCTGTGTGCGTGGCCAAGCTCCACGACAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS CAA 72 bp TGGATGGCAAAGTCGGTCATGACCTGCAAGGCCTTGTaGGTCAGCTGCAGGTCCATGGAGATGGAGCCCACT +
Preference number: 6 (lower is better)
Translates to: WMAKSVMTCKAL*VSCRSMEMEPT
Trigger: AGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317368.11
CDS CAA 72 bp AACTGGATGGCAAAGTCGGTCATGACCTGCAAGGCCTaGTTGGTCAGCTGCAGGTCCATGGAGATGGAGCCC +
Preference number: 6 (lower is better)
Translates to: NWMAKSVMTCKA*LVSCRSMEMEP
Trigger: GGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS CAA 90 bp TTGCGGTTGAACTGGATGGCAAAGTCGGTCATGACCTGCAAGGCCTaGTTGGTCAGCTGCAGGTCCATGGAGATGGAGCCCACTGCTTTG +
Preference number: 6 (lower is better)
Translates to: LRLNWMAKSVMTCKA*LVSCRSMEMEPTAL
Trigger: CAAAGCAGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCAGTTCAACCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317368.11
CDS GCA 72 bp TTGCGGTTGAACTGGATGGCAAAGTCGGTCATGACCTaGAAGGCCTTGTTGGTCAGCTGCAGGTCCATGGAG +
Preference number: 6 (lower is better)
Translates to: LRLNWMAKSVMT*KALLVSCRSME
Trigger: CTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCAGTTCAACCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000432560.6
ENST00000472057.1
CDS GCA 72 bp GGGGAAAGAGAAAGCGATCTGCTAACCTCTAAGTCCTaGACCACGGGAACCAGCAGGGAAGGTGACATGCAG +
Preference number: 6 (lower is better)
Translates to: GERESDLLTSKS*TTGTSREGDMQ
Trigger: CTGCATGTCACCTTCCCTGCTGGTTCCCGTGGTGCAGGACTTAGAGGTTAGCAGATCGCTTTCTCTTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 72 bp CACATATGGATCCTCGTCCTTCAGGCACTTCCGGAGTaGCTCGCACAGGTACTCTGTGATCTTGTCAACGCG +
Preference number: 6 (lower is better)
Translates to: HIWILVLQALPE*LAQVLCDLVNA
Trigger: CGCGTTGACAAGATCACAGAGTACCTGTGCGAGCCACTCCGGAAGTGCCTGAAGGACGAGGATCCATATGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS CCA 72 bp TCTAAAGCACTGGTTCTGCAGGGTGCAGTTAGGAAGTaGGAACAATGGAGTTCCGCAGGTCAGCAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: SKALVLQGAVRK*EQWSSAGQQQP
Trigger: GGGCTGCTGCTGACCTGCGGAACTCCATTGTTCCCACTTCCTAACTGCACCCTGCAGAACCAGTGCTTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 72 bp GGAGAGAGGAGCCCCCACCCATCCACTCTAAAGCACTaGTTCTGCAGGGTGCAGTTAGGAAGTGGGAACAAT +
Preference number: 6 (lower is better)
Translates to: GERSPHPSTLKH*FCRVQLGSGNN
Trigger: ATTGTTCCCACTTCCTAACTGCACCCTGCAGAACCAGTGCTTTAGAGTGGATGGGTGGGGGCTCCTCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CAA 90 bp AGGTATACTAGCTTCTTCAGCTCCAGGTTGTCCGTCTGCATGCAGTaGACCACATCGGGGAAGAGGGCACTGACATCTTTGCCCACGGTC +
Preference number: 6 (lower is better)
Translates to: RYTSFFSSRLSVCMQ*TTSGKRALTSLPTV
Trigger: GACCGTGGGCAAAGATGTCAGTGCCCTCTTCCCCGATGTGGTCAACTGCATGCAGACGGACAACCTGGAGCTGAAGAAGCTAGTATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
ENST00000473606.1
CDS GCA 72 bp AGGTATACTAGCTTCTTCAGCTCCAGGTTGTCCGTCTaGATGCAGTTGACCACATCGGGGAAGAGGGCACTG +
Preference number: 6 (lower is better)
Translates to: RYTSFFSSRLSV*MQLTTSGKRAL
Trigger: CAGTGCCCTCTTCCCCGATGTGGTCAACTGCATGCAGACGGACAACCTGGAGCTGAAGAAGCTAGTATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
ENST00000473606.1
CDS GCA 72 bp CACAGCCTTCCGTACAAAGTCCACATCCACTTCTGTTaGGTACTCTTTCAGCTCTGCCAACACCTGTGGCCC +
Preference number: 6 (lower is better)
Translates to: HSLPYKVHIHFC*VLFQLCQHLWP
Trigger: GGGCCACAGGTGTTGGCAGAGCTGAAAGAGTACGCAACAGAAGTGGATGTGGACTTTGTACGGAAGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415756.1
CDS CCA 72 bp CCTGCCCTCAAGGAGCTCTGTCTAATGCCAGGGGCCTaGAGTATAAGCTGCTTCTACCTTGAAAACTCTGGG +
Preference number: 6 (lower is better)
Translates to: PALKELCLMPGA*SISCFYLENSG
Trigger: CCCAGAGTTTTCAAGGTAGAAGCAGCTTATACTCCAGGCCCCTGGCATTAGACAGAGCTCCTTGAGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CAA 72 bp AGCTTCTTCAGCTCCAGGTTGTCCGTCTGCATGCAGTaGACCACATCGGGGAAGAGGGCACTGACATCTTTG +
Preference number: 6 (lower is better)
Translates to: SFFSSRLSVCMQ*TTSGKRALTSL
Trigger: CAAAGATGTCAGTGCCCTCTTCCCCGATGTGGTCAACTGCATGCAGACGGACAACCTGGAGCTGAAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
ENST00000473606.1
CDS CAA 72 bp GCACAGCCTTCCGTACAAAGTCCACATCCACTTCTGTaGCGTACTCTTTCAGCTCTGCCAACACCTGGGCGA +
Preference number: 6 (lower is better)
Translates to: AQPSVQSPHPLL*RTLSALPTPGR
Trigger: TCGCCCAGGTGTTGGCAGAGCTGAAAGAGTACGCAACAGAAGTGGATGTGGACTTTGTACGGAAGGCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS CAA 72 bp GCACAGCCTTCCGTACAAAGTCCACATCCACTTCTGTaGCGTACTCTTTCAGCTCTGCCAACACCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: AQPSVQSPHPLL*RTLSALPTPVA
Trigger: GGCCACAGGTGTTGGCAGAGCTGAAAGAGTACGCAACAGAAGTGGATGTGGACTTTGTACGGAAGGCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415756.1
CDS GCA 72 bp CACAGCCTTCCGTACAAAGTCCACATCCACTTCTGTTaGGTACTCTTTCAGCTCTGCCAACACCTGGGCGAT +
Preference number: 6 (lower is better)
Translates to: HSLPYKVHIHFC*VLFQLCQHLGD
Trigger: ATCGCCCAGGTGTTGGCAGAGCTGAAAGAGTACGCAACAGAAGTGGATGTGGACTTTGTACGGAAGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317368.11
ENST00000357586.7
ENST00000405198.6
ENST00000421126.5
ENST00000432560.6
CDS TCA 72 bp CCTGATGGGGCAATCTGCTGGAACACTCCTGGGCAGTaGATATACACAGACTCCCTAGGAGAATGGGATTCT +
Preference number: 6 (lower is better)
Translates to: PDGAICWNTPGQ*IYTDSLGEWDS
Trigger: AGAATCCCATTCTCCTAGGGAGTCTGTGTATATTCACTGCCCAGGAGTGTTCCAGCAGATTGCCCCATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415756.1
CDS GCA 72 bp GCAATGTCACTTCCCAGTCAGGGGTGCCAAACCAACTaGACCACCTTACAGGGCCCAATTTTACACAATCTT +
Preference number: 6 (lower is better)
Translates to: AMSLPSQGCQTN*TTLQGPILHNL
Trigger: AAGATTGTGTAAAATTGGGCCCTGTAAGGTGGTGCAGTTGGTTTGGCACCCCTGACTGGGAAGTGACATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CAA 90 bp TGTTCCGAGACCCAATTGGTGTCTTATCTGGGTAACCTGACGGGGTaGATTTGGAAGCTTTCTAGAAAGGTCCTTCTCAGGGACCAAACT +
Preference number: 6 (lower is better)
Translates to: CSETQLVSYLGNLTG*IWKLSRKVLLRDQT
Trigger: AGTTTGGTCCCTGAGAAGGACCTTTCTAGAAAGCTTCCAAATCAACCCCGTCAGGTTACCCAGATAAGACACCAATTGGGTCTCGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CCA 72 bp TTGGTGTCTTATCTGGGTAACCTGACGGGGTTGATTTaGAAGCTTTCTAGAAAGGTCCTTCTCAGGGACCAA +
Preference number: 6 (lower is better)
Translates to: LVSYLGNLTGLI*KLSRKVLLRDQ
Trigger: TTGGTCCCTGAGAAGGACCTTTCTAGAAAGCTTCCAAATCAACCCCGTCAGGTTACCCAGATAAGACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CAA 72 bp CAATCTTCTAGTCCAACTCACTGTTCCGAGACCCAATaGGTGTCTTATCTGGGTAACCTGACGGGGTTGATT +
Preference number: 6 (lower is better)
Translates to: QSSSPTHCSETQ*VSYLGNLTGLI
Trigger: AATCAACCCCGTCAGGTTACCCAGATAAGACACCAATTGGGTCTCGGAACAGTGAGTTGGACTAGAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482818.1
CDS CAA 90 bp AATTTTACACAATCTTCTAGTCCAACTCACTGTTCCGAGACCCAATaGGTGTCTTATCTGGGTAACCTGACGGGGTTGATTTGGAAGCTT +
Preference number: 6 (lower is better)
Translates to: NFTQSSSPTHCSETQ*VSYLGNLTGLIWKL
Trigger: AAGCTTCCAAATCAACCCCGTCAGGTTACCCAGATAAGACACCAATTGGGTCTCGGAACAGTGAGTTGGACTAGAAGATTGTGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482818.1