RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AOC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000131471

Ensembl transcript IDs: ENST00000308423.7, ENST00000588033.1, ENST00000591562.1, ENST00000592999.5, ENST00000613571.1, ENST00000617500.4

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTCTTTGTCCCCATCCCCAATCCAGACCTCAGGAGGGACAGCAGTaGTGGGAATGGAGCCCAAGCCTGGACCAGGCCAGGCCCTGCCCC +
Preference number: 1 (lower is better)
Translates to: FLCPHPQSRPQEGQQ*WEWSPSLDQARPCP
Trigger: GGGGCAGGGCCTGGCCTGGTCCAGGCTTGGGCTCCATTCCCATCACTGCTGTCCCTCCTGAGGTCTGGATTGGGGATGGGGACAAAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR TCA 90 bp CCTGGCTGGGTGGCTGGAGTTGTAGGGGCTTTGGCTTCTCATCTTTaGTGCCCACCCTTTGTTTCCACTCCAGCCTCCCAAACAGGCTGT +
Preference number: 1 (lower is better)
Translates to: PGWVAGVVGALASHL*CPPFVSTPASQTGC
Trigger: ACAGCCTGTTTGGGAGGCTGGAGTGGAAACAAAGGGTGGGCATCAAAGATGAGAAGCCAAAGCCCCTACAACTCCAGCCACCCAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR CCA 90 bp TTCCACTCCAGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTaGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCA +
Preference number: 1 (lower is better)
Translates to: FHSSLPNRLLQNTEP*YKMAILHYHCTPKS
Trigger: TGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCTGGAGTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR CCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATaGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAATGC +
Preference number: 1 (lower is better)
Translates to: ASQTGCCRIQSPGTK*PFFIIIAPPNHLKC
Trigger: GCATTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGAATGGAGCCCAAGCCTaGACCAGGCCAGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLNGAQA*TRPGPA
Trigger: GGCAGGGCCTGGCCTGGTCCAGGCTTGGGCTCCATT...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGGGGAGTACCAGGGGCTaGGACATAGGGATATCCCCT +
Preference number: 2 (lower is better)
Translates to: FACLNVIGQPLLAGWLELGSTRG*DIGISP
Trigger: AGGGGATATCCCTATGTCCCAGCCCCTGGTACTCCC...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGATGGACTTGCAGGACTaGCAACCCTACTCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLMDLQD*QPYSGV
Trigger: GACCCCAGAGTAGGGTTGCCAGTCCTGCAAGTCCAT...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGATGCCTGAATGTGATTaGACAGCCCCTCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLMPECD*TAPPGW
Trigger: CCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCAT...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGAGAGGAGACGGAACTTaGCTGAAAACTGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLRGDGT*LKTEGW
Trigger: CCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTCCTCT...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGCTGCTGCTGTCACGATaGCCATCCTCCTCTATAGAG +
Preference number: 2 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLLLLSR*PSSSIE
Trigger: CTCTATAGAGGAGGATGGTCATCGTGACAGCAGCAG...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCCAGAAGCAGCTGTCCTaGAACACACCCAGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: VTMTILLYREHEAGRHKCQKQLS*NTPSPR
Trigger: CCTGGGGCTGGGTGTGTTTCAGGACAGCTGCTTCTG...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCATGGACTTGCAGGACTaGCAACCCTACTCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPMDLQD*QPYSGV
Trigger: GACCCCAGAGTAGGGTTGCCAGTCCTGCAAGTCCAT...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGTTTCCAGCTCAGCTATaGACTTGCAGGACTGGCAAC +
Preference number: 2 (lower is better)
Translates to: FACLNVIGQPLLAGWLELFPAQL*TCRTGN
Trigger: GTTGCCAGTCCTGCAAGTCCATAGCTGAGCTGGAAA...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTACAGCCCCTCCTGGCTaGGTGGCTGGAGTTGTAGGG +
Preference number: 2 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAITAPPG*VAGVVG
Trigger: CCCTACAACTCCAGCCACCCAGCCAGGAGGGGCTGT...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCCCTGGCCTCTGTGGATaGGAACTCAGTACAGCTGGC +
Preference number: 2 (lower is better)
Translates to: VTMTILLYREHEAGRHKCPGLCG*ELSTAG
Trigger: GCCAGCTGTACTGAGTTCTCATCCACAGAGGCCAGG...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGCTTGAAATGCTAACTTaGGCTGCTGCTGTCACGATG +
Preference number: 2 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLLEMLT*AAAVTM
Trigger: CATCGTGACAGCAGCAGCTCAAGTTAGCATTTCAAG...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAACTGGCAACCCTACTCTaGGGTCTCCAGGGAATAGCC +
Preference number: 2 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIELATLL*GLQGIA
Trigger: GGCTATTCCCTGGAGACCCCAGAGTAGGGTTGCCAG...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAGAGACGGAACTTGACTaGAAACTGAGGGCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIEETELD*KLRAGG
Trigger: TCCCCCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTC...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGGATTCGGGAGAAATTaGAGGATAGAAGAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLGFGRN*RIEEKA
Trigger: TGCCTTCTCTTCTATCCTGCAATTTCTCCCGAATCC...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCGCTAACTTGAGCTGCTaGTGTCACGATGACCATCCT +
Preference number: 2 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPANLSC*CHDDHP
Trigger: AGGATGGTCATCGTGACAGCAGCAGCTCAAGTTAGC...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGAGAACTCAGTACAGCTaGCATCAACAAGGTTCAGTG +
Preference number: 2 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLRTQYS*HQQGSV
Trigger: CACTGAACCTTGTTGATGCCAGCTGTACTGAGTTCT...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAATGGACTTGCAGGACTaGCAACCCTACTCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIEMDLQD*QPYSGV
Trigger: GACCCCAGAGTAGGGTTGCCAGTCCTGCAAGTCCAT...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCTTTCCAGCTCAGCTATaGACTTGCAGGACTGGCAAC +
Preference number: 2 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPFPAQL*TCRTGN
Trigger: GTTGCCAGTCCTGCAAGTCCATAGCTGAGCTGGAAA...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGCCTGGCCTCTGTGGATaGGAACTCAGTACAGCTGGC +
Preference number: 2 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRPGLCG*ELSTAG
Trigger: GCCAGCTGTACTGAGTTCTCATCCACAGAGGCCAGG...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTGAGACGGAACTTGACTaGAAACTGAGGGCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAIETELD*KLRAGG
Trigger: TCCCCCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTC...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAAGAGGAGACGGAACTTaGCTGAAAACTGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIERGDGT*LKTEGW
Trigger: CCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTCCTCT...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCGCTCAGCTATGGACTTaGAGGACTGGCAACCCTACT +
Preference number: 2 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFAQLWT*RTGNPT
Trigger: AGTAGGGTTGCCAGTCCTGCAAGTCCATAGCTGAGC...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGAATGGAGCCCAAGCCTaGACCAGGCCAGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLNGAQA*TRPGPA
Trigger: GGCAGGGCCTGGCCTGGTCCAGGCTTGGGCTCCATT...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGAGACGGAACTTGACTaGAAACTGAGGGCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRETELD*KLRAGG
Trigger: TCCCCCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTC...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAATTTCCAGCTCAGCTATaGACTTGCAGGACTGGCAAC +
Preference number: 2 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIEFPAQL*TCRTGN
Trigger: GTTGCCAGTCCTGCAAGTCCATAGCTGAGCTGGAAA...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTACAGCCCCTCCTGGCTaGGTGGCTGGAGTTGTAGGG +
Preference number: 2 (lower is better)
Translates to: LLLSETQMGSALYTFLWLTAPPG*VAGVVG
Trigger: CCCTACAACTCCAGCCACCCAGCCAGGAGGGGCTGT...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTCAGAAGCAGCTGTCCTaGAACACACCCAGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: LSETQMGSALYTFLWLAFQKQLS*NTPSPR
Trigger: CCTGGGGCTGGGTGTGTTTCAGGACAGCTGCTTCTG...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTCAGAAGCAGCTGTCCTaGAACACACCCAGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: LLLSETQMGSALYTFLWLQKQLS*NTPSPR
Trigger: CCTGGGGCTGGGTGTGTTTCAGGACAGCTGCTTCTG...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCCTTGAAATGCTAACTTaGGCTGCTGCTGTCACGATG +
Preference number: 2 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFLEMLT*AAAVTM
Trigger: CATCGTGACAGCAGCAGCTCAAGTTAGCATTTCAAG...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCTTGGCTTCTCATCTTTaGTGCCCACCCTTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: VTMTILLYREHEAGRHKCLASHL*CPPFVS
Trigger: GGAAACAAAGGGTGGGCATCAAAGATGAGAAGCCAA...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTTCCCAAACAGGCTGTTaGAGAATACAGAGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAISQTGC*RIQSPG
Trigger: ACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGA...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCCCAGCTCATTCGCATaGCTGAATGTGATTGGACAG +
Preference number: 2 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAIPSSFA*LNVIGQ
Trigger: CTGTCCAATCACATTCAGGCATGCGAATGAGCTGGG...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAACAGCCCCTCCTGGCTaGGTGGCTGGAGTTGTAGGG +
Preference number: 2 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKTAPPG*VAGVVG
Trigger: CCCTACAACTCCAGCCACCCAGCCAGGAGGGGCTGT...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTTTGGCTTCTCATCTTTaGTGCCCACCCTTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAILASHL*CPPFVS
Trigger: GGAAACAAAGGGTGGGCATCAAAGATGAGAAGCCAA...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAGGATTCGGGAGAAATTaGAGGATAGAAGAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIEGFGRN*RIEEKA
Trigger: TGCCTTCTCTTCTATCCTGCAATTTCTCCCGAATCC...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCAATGCTAACTTGAGCTaGTGCTGTCACGATGACCAT +
Preference number: 2 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFNANLS*CCHDDH
Trigger: ATGGTCATCGTGACAGCAGCAGCTCAAGTTAGCATT...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCAGAACTCAGTACAGCTaGCATCAACAAGGTTCAGTG +
Preference number: 2 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFRTQYS*HQQGSV
Trigger: CACTGAACCTTGTTGATGCCAGCTGTACTGAGTTCT...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGTTTCCAGCTCAGCTATaGACTTGCAGGACTGGCAAC +
Preference number: 2 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRFPAQL*TCRTGN
Trigger: GTTGCCAGTCCTGCAAGTCCATAGCTGAGCTGGAAA...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGGGGAGTACCAGGGGCTaGGACATAGGGATATCCCCT +
Preference number: 2 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLGSTRG*DIGISP
Trigger: AGGGGATATCCCTATGTCCCAGCCCCTGGTACTCCC...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR CAA 90 bp TTGATGCCCACCCTTTGTTTCCACTCCAGCCTCCCAAACAGGCTGTaGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCTTCATTAT +
Preference number: 2 (lower is better)
Translates to: LMPTLCFHSSLPNRL*QNTEPWYKMAILHY
Trigger: ATAATGAAGAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCTGGAGTGGAAACAAAGGGTGGGCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTAATGCTAACTTGAGCTaGTGCTGTCACGATGACCAT +
Preference number: 2 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAINANLS*CCHDDH
Trigger: ATGGTCATCGTGACAGCAGCAGCTCAAGTTAGCATT...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTATGGACTTGCAGGACTaGCAACCCTACTCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: LLLSETQMGSALYTFLWLMDLQD*QPYSGV
Trigger: GACCCCAGAGTAGGGTTGCCAGTCCTGCAAGTCCAT...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAGGGAGTACCAGGGGCTaGGACATAGGGATATCCCCT +
Preference number: 2 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKGSTRG*DIGISP
Trigger: AGGGGATATCCCTATGTCCCAGCCCCTGGTACTCCC...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTCTGCTGCTGTCACGATaGCCATCCTCCTCTATAGAG +
Preference number: 2 (lower is better)
Translates to: LLLSETQMGSALYTFLWLLLLSR*PSSSIE
Trigger: CTCTATAGAGGAGGATGGTCATCGTGACAGCAGCAG...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTGCTCAGCTATGGACTTaGAGGACTGGCAACCCTACT +
Preference number: 2 (lower is better)
Translates to: LSETQMGSALYTFLWLAFAQLWT*RTGNPT
Trigger: AGTAGGGTTGCCAGTCCTGCAAGTCCATAGCTGAGC...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGGCAGGCAGACACAAATaGACAGAAGCAGCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLAGRHK*TEAAVL
Trigger: CAGGACAGCTGCTTCTGTGCATTTGTGTCTGCCTGC...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAATGCCTGAATGTGATTaGACAGCCCCTCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKMPECD*TAPPGW
Trigger: CCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCAT...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAAGAGGAGACGGAACTTaGCTGAAAACTGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKRGDGT*LKTEGW
Trigger: CCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTCCTCT...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAACTGCTGCTGTCACGATaGCCATCCTCCTCTATAGAG +
Preference number: 2 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKLLLSR*PSSSIE
Trigger: CTCTATAGAGGAGGATGGTCATCGTGACAGCAGCAG...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAGCTCAGCTATGGACTTaGAGGACTGGCAACCCTACT +
Preference number: 2 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKAQLWT*RTGNPT
Trigger: AGTAGGGTTGCCAGTCCTGCAAGTCCATAGCTGAGC...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCTAACTTGAGCTGCTaGTGTCACGATGACCATCCT +
Preference number: 2 (lower is better)
Translates to: LLLSETQMGSALYTFLWLANLSC*CHDDHP
Trigger: AGGATGGTCATCGTGACAGCAGCAGCTCAAGTTAGC...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTGCTAACTTGAGCTGCTaGTGTCACGATGACCATCCT +
Preference number: 2 (lower is better)
Translates to: LSETQMGSALYTFLWLAFANLSC*CHDDHP
Trigger: AGGATGGTCATCGTGACAGCAGCAGCTCAAGTTAGC...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTTCCCAAACAGGCTGTTaGAGAATACAGAGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: LLLSETQMGSALYTFLWLSQTGC*RIQSPG
Trigger: ACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGA...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCCAGCTCATTCGCATaGCTGAATGTGATTGGACAG +
Preference number: 2 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLPSSFA*LNVIGQ
Trigger: CTGTCCAATCACATTCAGGCATGCGAATGAGCTGGG...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTTTGGCTTCTCATCTTTaGTGCCCACCCTTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: LSETQMGSALYTFLWLAFLASHL*CPPFVS
Trigger: GGAAACAAAGGGTGGGCATCAAAGATGAGAAGCCAA...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGCAGGCAGACACAAATaGACAGAAGCAGCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCAGRHK*TEAAVL
Trigger: CAGGACAGCTGCTTCTGTGCATTTGTGTCTGCCTGC...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGAATGCTAACTTGAGCTaGTGCTGTCACGATGACCAT +
Preference number: 2 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLNANLS*CCHDDH
Trigger: ATGGTCATCGTGACAGCAGCAGCTCAAGTTAGCATT...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTAGAACTCAGTACAGCTaGCATCAACAAGGTTCAGTG +
Preference number: 2 (lower is better)
Translates to: LSETQMGSALYTFLWLAFRTQYS*HQQGSV
Trigger: CACTGAACCTTGTTGATGCCAGCTGTACTGAGTTCT...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGCTAACTTGAGCTGCTaGTGTCACGATGACCATCCT +
Preference number: 2 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCANLSC*CHDDHP
Trigger: AGGATGGTCATCGTGACAGCAGCAGCTCAAGTTAGC...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCAGAATACAGAGCCCTaGTACAAAATGGCCATTCTT +
Preference number: 2 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLQNTEP*YKMAIL
Trigger: AAGAATGGCCATTTTGTACCAGGGCTCTGTATTCTG...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTCAGAATACAGAGCCCTaGTACAAAATGGCCATTCTT +
Preference number: 2 (lower is better)
Translates to: LSETQMGSALYTFLWLAFQNTEP*YKMAIL
Trigger: AAGAATGGCCATTTTGTACCAGGGCTCTGTATTCTG...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR TCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTTATTCTACTCCTTTCTaGAACACAAATGGGAAGTGC +
Preference number: 2 (lower is better)
Translates to: LLLSETQMGSALYTFLWLYSTPF*NTNGKC
Trigger: GCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATA...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTAATGCTAACTTGAGCTaGTGCTGTCACGATGACCAT +
Preference number: 2 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCNANLS*CCHDDH
Trigger: ATGGTCATCGTGACAGCAGCAGCTCAAGTTAGCATT...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTAGAACTCAGTACAGCTaGCATCAACAAGGTTCAGTG +
Preference number: 2 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCRTQYS*HQQGSV
Trigger: CACTGAACCTTGTTGATGCCAGCTGTACTGAGTTCT...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTAGCCCTGGTACAAAATaGCCATTCTTCATTATCATT +
Preference number: 2 (lower is better)
Translates to: LLLSETQMGSALYTFLWLSPGTK*PFFIII
Trigger: AATGATAATGAAGAATGGCCATTTTGTACCAGGGCT...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTTTTCTGAAACACAAATaGGAAGTGCGCTATACACAT +
Preference number: 2 (lower is better)
Translates to: LSETQMGSALYTFLWLAFFLKHK*EVRYTH
Trigger: ATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAA...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAAGCCCTGGTACAAAATaGCCATTCTTCATTATCATT +
Preference number: 2 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKSPGTK*PFFIII
Trigger: AATGATAATGAAGAATGGCCATTTTGTACCAGGGCT...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR GCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTCACATTTCTGTGGCTTaGCTTTTTCACCTGAAGATT +
Preference number: 2 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCHISVA*LFHLKI
Trigger: AATCTTCAGGTGAAAAAGGCAAGCCACAGAAATGTG...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR CCA 72 bp CCCAGGGCCCAGCTCATTCGCATGCCTGAATGTGATTaGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGTA +
Preference number: 3 (lower is better)
Translates to: PRAQLIRMPECD*TAPPGWVAGVV
Trigger: TACAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCTGGGCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGAGCTCAGCTATGGACTaGCAGGACTGGCAACCCTAC +
Preference number: 3 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLSSAMD*QDWQPY
Trigger: GTAGGGTTGCCAGTCCTGCAAGTCCATAGCTGAGCT...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGAGCTCAGCTATGGACTaGCAGGACTGGCAACCCTAC +
Preference number: 3 (lower is better)
Translates to: FACLNVIGQPLLAGWLELSSAMD*QDWQPY
Trigger: GTAGGGTTGCCAGTCCTGCAAGTCCATAGCTGAGCT...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGTTTGATGCCCACCCTTaGTTTCCACTCCAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLFDAHP*FPLQPP
Trigger: GGGAGGCTGGAGTGGAAACAAAGGGTGGGCATCAAA...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR CCA 72 bp CGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTaGGTGGCTGGAGTTGTAGGGGCTTTGGCTTCTCAT +
Preference number: 3 (lower is better)
Translates to: RMPECDWTAPPG*VAGVVGALASH
Trigger: ATGAGAAGCCAAAGCCCCTACAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGAACGACACACAGGGATaGGCCACTCTGATTAGGGGT +
Preference number: 3 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLNDTQG*ATLIRG
Trigger: ACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTT...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGTCTCTTGCTATTTCTTaGTCCCCATCCCCAATCCAG +
Preference number: 3 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLSLAIS*SPSPIQ
Trigger: CTGGATTGGGGATGGGGACAAAGAAATAGCAAGAGA...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR TCA 72 bp GTGGCTGGAGTTGTAGGGGCTTTGGCTTCTCATCTTTaGTGCCCACCCTTTGTTTCCACTCCAGCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: VAGVVGALASHL*CPPFVSTPASQ
Trigger: TTGGGAGGCTGGAGTGGAAACAAAGGGTGGGCATCAAAGATGAGAAGCCAAAGCCCCTACAACTCCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCCTCCCAAACAGGCTGTaGCAGAATACAGAGCCCTGG +
Preference number: 3 (lower is better)
Translates to: VTMTILLYREHEAGRHKCLPNRL*QNTEPW
Trigger: CCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAG...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCAACGACACACAGGGATaGGCCACTCTGATTAGGGGT +
Preference number: 3 (lower is better)
Translates to: VTMTILLYREHEAGRHKCNDTQG*ATLIRG
Trigger: ACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTT...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGAGCTCAGCTATGGACTaGCAGGACTGGCAACCCTAC +
Preference number: 3 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRSSAMD*QDWQPY
Trigger: GTAGGGTTGCCAGTCCTGCAAGTCCATAGCTGAGCT...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCTCCCAAACAGGCTGTaGCAGAATACAGAGCCCTGG +
Preference number: 3 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLLPNRL*QNTEPW
Trigger: CCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAG...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTAACGACACACAGGGATaGGCCACTCTGATTAGGGGT +
Preference number: 3 (lower is better)
Translates to: LSETQMGSALYTFLWLAFNDTQG*ATLIRG
Trigger: ACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTT...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR CCA 72 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTaGTACAAAATGGCCATTCTTCATTATCATTGCACC +
Preference number: 3 (lower is better)
Translates to: SLPNRLLQNTEP*YKMAILHYHCT
Trigger: GGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR TCA 72 bp GGCCATTCTTCATTATCATTGCACCCCCAAATCACTTaGAATGCTAACTTGAGCTGCTGCTGTCACGATGAC +
Preference number: 3 (lower is better)
Translates to: GHSSLSLHPQIT*NANLSCCCHDD
Trigger: GTCATCGTGACAGCAGCAGCTCAAGTTAGCATTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR CCA 72 bp ACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATaGCCATTCTTCATTATCATTGCACCCCCAAATCAC +
Preference number: 3 (lower is better)
Translates to: TGCCRIQSPGTK*PFFIIIAPPNH
Trigger: GTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGAGGATTCGGGAGAAATaGCAGGATAGAAGAGAAGGC +
Preference number: 3 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLRIREK*QDRREG
Trigger: GCCTTCTCTTCTATCCTGCAATTTCTCCCGAATCCT...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTTTTGATGCCCACCCTTaGTTTCCACTCCAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCFDAHP*FPLQPP
Trigger: GGGAGGCTGGAGTGGAAACAAAGGGTGGGCATCAAA...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGTCTCTTGCTATTTCTTaGTCCCCATCCCCAATCCAG +
Preference number: 3 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLSLAIS*SPSPIQ
Trigger: CTGGATTGGGGATGGGGACAAAGAAATAGCAAGAGA...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAAGGATTCGGGAGAAATaGCAGGATAGAAGAGAAGGC +
Preference number: 3 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKRIREK*QDRREG
Trigger: GCCTTCTCTTCTATCCTGCAATTTCTCCCGAATCCT...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTAACGACACACAGGGATaGGCCACTCTGATTAGGGGT +
Preference number: 3 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCNDTQG*ATLIRG
Trigger: ACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTT...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTACACATTTCTGTGGCTaGCCTTTTTCACCTGAAGAT +
Preference number: 3 (lower is better)
Translates to: LSETQMGSALYTFLWLAFTHFCG*PFSPED
Trigger: ATCTTCAGGTGAAAAAGGCAAGCCACAGAAATGTGT...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
3UTR-3UTR CAA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTTCTCTTGCTATTTCTTaGTCCCCATCCCCAATCCAG +
Preference number: 3 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCSLAIS*SPSPIQ
Trigger: CTGGATTGGGGATGGGGACAAAGAAATAGCAAGAGA...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCGGCTCCTGGACGGGGTaGGGGGCTCCCGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: VTMTILLYREHEAGRHKCGSWTG*GAPGLW
Trigger: CCAGAGTCCGGGAGCCCCCCACCCCGTCCAGGAGCC...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR TCA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGCAGAAGCAGCTGTCCTaGAACACACCCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FACLNVIGQPLLAGWLELQKQLS*NTPSPR
Trigger: CCTGGGGCTGGGTGTGTTTCAGGACAGCTGCTTCTG...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGCCATGGAGCTGTTTTaGGGCAGCGGCTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLAMELF*GSGSPA
Trigger: TGCTGGAGAGCCGCTGCCCCAAAACAGCTCCATGGC...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGCTGGCAACCCTACTCTaGGGTCTCCAGGGAATAGCC +
Preference number: 4 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLLATLL*GLQGIA
Trigger: GGCTATTCCCTGGAGACCCCAGAGTAGGGTTGCCAG...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGAGAGGAATGCCGAGCTaGTGTAGCCCGTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLRGMPS*CSPWHR
Trigger: TCTATGCCACGGGCTACATCAGCTCGGCATTCCTCT...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR TCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCCAGAAGCAGCTGTCCTaGAACACACCCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPQKQLS*NTPSPR
Trigger: CCTGGGGCTGGGTGTGTTTCAGGACAGCTGCTTCTG...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAGGGGCTCCCGGACTCTaGCTGAGGTTCCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIEGAPGL*LRFPVV
Trigger: GACTACCGGGAACCTCAGCCAGAGTCCGGGAGCCCC...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGATGGACTTGCAGGACTaGCAACCCTACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: FACLNVIGQPLLAGWLELMDLQD*QPYSGV
Trigger: GACCCCAGAGTAGGGTTGCCAGTCCTGCAAGTCCAT...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAAATGGAGCCCAAGCCTaGACCAGGCCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIENGAQA*TRPGPA
Trigger: GGCAGGGCCTGGCCTGGTCCAGGCTTGGGCTCCATT...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCAATGGAGCCCAAGCCTaGACCAGGCCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFNGAQA*TRPGPA
Trigger: GGCAGGGCCTGGCCTGGTCCAGGCTTGGGCTCCATT...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGAGAGGAGACGGAACTTaGCTGAAAACTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FACLNVIGQPLLAGWLELRGDGT*LKTEGW
Trigger: CCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTCCTCT...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCAAATCCTCTCCCAGCTaGAGCCTCTCGCCATGGAGC +
Preference number: 4 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPKSSPS*SLSPWS
Trigger: GCTCCATGGCGAGAGGCTTCAGCTGGGAGAGGATTT...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613571.1
CDS-3UTR GCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGCAGGCAGACACAAATaGACAGAAGCAGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLAGRHK*TEAAVL
Trigger: CAGGACAGCTGCTTCTGTGCATTTGTGTCTGCCTGC...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCGGGAGTACCAGGGGCTaGGACATAGGGATATCCCCT +
Preference number: 4 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPGSTRG*DIGISP
Trigger: AGGGGATATCCCTATGTCCCAGCCCCTGGTACTCCC...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAACAGCCCCTCCTGGCTaGGTGGCTGGAGTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIETAPPG*VAGVVG
Trigger: CCCTACAACTCCAGCCACCCAGCCAGGAGGGGCTGT...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTAATGGAGCCCAAGCCTaGACCAGGCCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAINGAQA*TRPGPA
Trigger: GGCAGGGCCTGGCCTGGTCCAGGCTTGGGCTCCATT...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCAGAGGAATGCCGAGCTaGTGTAGCCCGTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPRGMPS*CSPWHR
Trigger: TCTATGCCACGGGCTACATCAGCTCGGCATTCCTCT...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR GCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTACGAGGAAGGCGGCCTaGTCCTCCATCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAITRKAA*SSISSS
Trigger: GCTGCTGGAGATGGAGGAGCAGGCCGCCTTCCTCGT...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGTCCCAAACAGGCTGTTaGAGAATACAGAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLSQTGC*RIQSPG
Trigger: ACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGA...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGGCTCCTGGACGGGGTaGGGGGCTCCCGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLGSWTG*GAPGLW
Trigger: CCAGAGTCCGGGAGCCCCCCACCCCGTCCAGGAGCC...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCGGGCAATGGGGAAGCTaGCTGGGTTCACCCCCATCT +
Preference number: 4 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFGQWGS*LGSPPS
Trigger: AGATGGGGGTGAACCCAGCCAGCTTCCCCATTGCCC...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCCACGGGTCAGGGGCGTaGTGTACTTGCCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFHGSGA*CTCPCQ
Trigger: TTGGCATGGGCAAGTACACCACGCCCCTGACCCGTG...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAGCCATGGAGCTGTTTTaGGGCAGCGGCTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIEAMELF*GSGSPA
Trigger: TGCTGGAGAGCCGCTGCCCCAAAACAGCTCCATGGC...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCGCCATGGAGCTGTTTTaGGGCAGCGGCTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VTMTILLYREHEAGRHKCAMELF*GSGSPA
Trigger: TGCTGGAGAGCCGCTGCCCCAAAACAGCTCCATGGC...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGAATGGAGCCCAAGCCTaGACCAGGCCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRNGAQA*TRPGPA
Trigger: GGCAGGGCCTGGCCTGGTCCAGGCTTGGGCTCCATT...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCAGAAGCAGCTGTCCTaGAACACACCCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAIQKQLS*NTPSPR
Trigger: CCTGGGGCTGGGTGTGTTTCAGGACAGCTGCTTCTG...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGCTTGAAATGCTAACTTaGGCTGCTGCTGTCACGATG +
Preference number: 4 (lower is better)
Translates to: FACLNVIGQPLLAGWLELLEMLT*AAAVTM
Trigger: CATCGTGACAGCAGCAGCTCAAGTTAGCATTTCAAG...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGTTGGCTTCTCATCTTTaGTGCCCACCCTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: FACLNVIGQPLLAGWLELLASHL*CPPFVS
Trigger: GGAAACAAAGGGTGGGCATCAAAGATGAGAAGCCAA...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCGCGGGTCGTCATTGCTaGTGGGGAATTTCCACCATA +
Preference number: 4 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPAGRHC*WGISTI
Trigger: TATGGTGGAAATTCCCCAGCAGCAATGACGACCCGC...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR GCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAGGGGCGTGGTGTACTTaGCCATGCCAAAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIEGAWCT*PCQSLH
Trigger: ATGGAGGCTTTGGCATGGGCAAGTACACCACGCCCC...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR GCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGACGAGGAAGGCGGCCTaGTCCTCCATCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRTRKAA*SSISSS
Trigger: GCTGCTGGAGATGGAGGAGCAGGCCGCCTTCCTCGT...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCTGGGTCACAGCCAGCTaGTACCTCTCCCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFWVTAS*YLSQLK
Trigger: CTTCAGCTGGGAGAGGTACCAGCTGGCTGTGACCCA...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000617500.4
CDS-3UTR CCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCCTGGCAACCCTACTCTaGGGTCTCCAGGGAATAGCC +
Preference number: 4 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFLATLL*GLQGIA
Trigger: GGCTATTCCCTGGAGACCCCAGAGTAGGGTTGCCAG...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGACAGCCCCTCCTGGCTaGGTGGCTGGAGTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRTAPPG*VAGVVG
Trigger: CCCTACAACTCCAGCCACCCAGCCAGGAGGGGCTGT...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGCAGAAGCAGCTGTCCTaGAACACACCCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRQKQLS*NTPSPR
Trigger: CCTGGGGCTGGGTGTGTTTCAGGACAGCTGCTTCTG...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGAATGCTAACTTGAGCTaGTGCTGTCACGATGACCAT +
Preference number: 4 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLNANLS*CCHDDH
Trigger: ATGGTCATCGTGACAGCAGCAGCTCAAGTTAGCATT...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCCCCAGCTCATTCGCATaGCTGAATGTGATTGGACAG +
Preference number: 4 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPPSSFA*LNVIGQ
Trigger: CTGTCCAATCACATTCAGGCATGCGAATGAGCTGGG...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTAGACGGGGGCTCTGTTaGCTCCTGGACGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LSETQMGSALYTFLWLAFRRGLC*LLDGVG
Trigger: CCCCACCCCGTCCAGGAGCCAACAGAGCCCCCGTCT...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGAGAACTCAGTACAGCTaGCATCAACAAGGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: FACLNVIGQPLLAGWLELRTQYS*HQQGSV
Trigger: CACTGAACCTTGTTGATGCCAGCTGTACTGAGTTCT...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCAGAGGAGACGGAACTTaGCTGAAAACTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VTMTILLYREHEAGRHKCRGDGT*LKTEGW
Trigger: CCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTCCTCT...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCCTGCTGCTGTCACGATaGCCATCCTCCTCTATAGAG +
Preference number: 4 (lower is better)
Translates to: VTMTILLYREHEAGRHKCLLLSR*PSSSIE
Trigger: CTCTATAGAGGAGGATGGTCATCGTGACAGCAGCAG...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCCTTGAAATGCTAACTTaGGCTGCTGCTGTCACGATG +
Preference number: 4 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPLEMLT*AAAVTM
Trigger: CATCGTGACAGCAGCAGCTCAAGTTAGCATTTCAAG...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCGACACAGAACTGAGCTaGCAAACAGAAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VTMTILLYREHEAGRHKCDTELS*QTEGCS
Trigger: GGAGCAGCCTTCTGTTTGTCAGCTCAGTTCTGTGTC...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617500.4
CDS-3UTR GCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCGCGGGTCGTCATTGCTaGTGGGGAATTTCCACCATA +
Preference number: 4 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFAGRHC*WGISTI
Trigger: TATGGTGGAAATTCCCCAGCAGCAATGACGACCCGC...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR GCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCGCTCAGCTATGGACTTaGAGGACTGGCAACCCTACT +
Preference number: 4 (lower is better)
Translates to: VTMTILLYREHEAGRHKCAQLWT*RTGNPT
Trigger: AGTAGGGTTGCCAGTCCTGCAAGTCCATAGCTGAGC...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCGCAGGCAGACACAAATaGACAGAAGCAGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFAGRHK*TEAAVL
Trigger: CAGGACAGCTGCTTCTGTGCATTTGTGTCTGCCTGC...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCAGAATCGTATTTCTATaGCCCCACTGGGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPRIVFL*PHWGGR
Trigger: TCTTCCACCCCAGTGGGGCCATAGAAATACGATTCT...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGGAGTACCAGGGGCTaGGACATAGGGATATCCCCT +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRGSTRG*DIGISP
Trigger: AGGGGATATCCCTATGTCCCAGCCCCTGGTACTCCC...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAACGAAGAGGGACAGCTaGTTCAACCAAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIETKRDS*FNQRRA
Trigger: TGCTCTCCTTTGGTTGAATCAGCTGTCCCTCTTCGT...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR TCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGGGTACCTCTCCCAGCTaGAGCCTCTCGCCATGGAGC +
Preference number: 4 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLGTSPS*SLSPWS
Trigger: GCTCCATGGCGAGAGGCTTCAGCTGGGAGAGGTACC...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000617500.4
CDS-3UTR TCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCTGCTGCTGTCACGATaGCCATCCTCCTCTATAGAG +
Preference number: 4 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAILLLSR*PSSSIE
Trigger: CTCTATAGAGGAGGATGGTCATCGTGACAGCAGCAG...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGTATTCTACTCCTTTCTaGAACACAAATGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLYSTPF*NTNGKC
Trigger: GCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATA...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCTGGTGTACTTGCCCATaGCAAAGCCTCCATCCACAT +
Preference number: 4 (lower is better)
Translates to: VTMTILLYREHEAGRHKCWCTCP*QSLHPH
Trigger: ATGTGGATGGAGGCTTTGGCATGGGCAAGTACACCA...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR GCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTACGAGGAAGGCGGCCTaGTCCTCCATCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSETQMGSALYTFLWLAFTRKAA*SSISSS
Trigger: GCTGCTGGAGATGGAGGAGCAGGCCGCCTTCCTCGT...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGCACATTTCTGTGGCTTaGCTTTTTCACCTGAAGATT +
Preference number: 4 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLHISVA*LFHLKI
Trigger: AATCTTCAGGTGAAAAAGGCAAGCCACAGAAATGTG...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGCACATTTCTGTGGCTTaGCTTTTTCACCTGAAGATT +
Preference number: 4 (lower is better)
Translates to: FACLNVIGQPLLAGWLELHISVA*LFHLKI
Trigger: AATCTTCAGGTGAAAAAGGCAAGCCACAGAAATGTG...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGTTCCCGGTAGTCAGATaGCTGGGACTAAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRFPVVR*LGLRVG
Trigger: TCCCACCCTTAGTCCCAGGCATCTGACTACCGGGAA...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613571.1
CDS-3UTR CCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAGGGGCTCCCGGACTCTaGCTGAGGTTCCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKGAPGL*LRFPVV
Trigger: GACTACCGGGAACCTCAGCCAGAGTCCGGGAGCCCC...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCAATTTCCACCATAGATaGCCAAGGCCTCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFNFHHR*PRPLGG
Trigger: GCCTCCAAGAGGCCTTGGCCATCTATGGTGGAAATT...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
3UTR CAA 72 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATaGGCCACTCTGATTAGGGGTCCCGTGACCTTGAGA +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQG*ATLIRGPVTLR
Trigger: TCTCAAGGTCACGGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCAAGGGTCATTCTGATTaGAAACGCTGCTGCTACTGG +
Preference number: 4 (lower is better)
Translates to: VTMTILLYREHEAGRHKCKGHSD*KRCCYW
Trigger: CCAGTAGCAGCAGCGTTTTCAATCAGAATGACCCTT...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000617500.4
CDS-3UTR TCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAACTTGAAATGCTAACTTaGGCTGCTGCTGTCACGATG +
Preference number: 4 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIELEMLT*AAAVTM
Trigger: CATCGTGACAGCAGCAGCTCAAGTTAGCATTTCAAG...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAGACTGGCCTGTCCTGTaGGAGGAGCATGGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKDWPVL*EEHGLG
Trigger: GCCTAGGCCATGCTCCTCTCACAGGACAGGCCAGTC...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591562.1
CDS-3UTR GCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGATAGCGGGTCGTCATTaGTGCTGGGGAATTTCCACC +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRIAGRH*CWGIST
Trigger: GGTGGAAATTCCCCAGCAGCAATGACGACCCGCTAT...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR GCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGCTCAGCTATGGACTTaGAGGACTGGCAACCCTACT +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRAQLWT*RTGNPT
Trigger: AGTAGGGTTGCCAGTCCTGCAAGTCCATAGCTGAGC...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGCAGGCAGACACAAATaGACAGAAGCAGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRAGRHK*TEAAVL
Trigger: CAGGACAGCTGCTTCTGTGCATTTGTGTCTGCCTGC...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTGGGCAATGGGGAAGCTaGCTGGGTTCACCCCCATCT +
Preference number: 4 (lower is better)
Translates to: LSETQMGSALYTFLWLAFGQWGS*LGSPPS
Trigger: AGATGGGGGTGAACCCAGCCAGCTTCCCCATTGCCC...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCGGTCGTCATTGCTGCTaGGGAATTTCCACCATAGAT +
Preference number: 4 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFGRHCC*GISTID
Trigger: ATCTATGGTGGAAATTCCCCAGCAGCAATGACGACC...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTCACGGGTCAGGGGCGTaGTGTACTTGCCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLHGSGA*CTCPCQ
Trigger: TTGGCATGGGCAAGTACACCACGCCCCTGACCCGTG...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGAGCCCTGGTACAAAATaGCCATTCTTCATTATCATT +
Preference number: 4 (lower is better)
Translates to: FACLNVIGQPLLAGWLELSPGTK*PFFIII
Trigger: AATGATAATGAAGAATGGCCATTTTGTACCAGGGCT...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGAGCCCTGGTACAAAATaGCCATTCTTCATTATCATT +
Preference number: 4 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLSPGTK*PFFIII
Trigger: AATGATAATGAAGAATGGCCATTTTGTACCAGGGCT...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGTTTCTGAAACACAAATaGGAAGTGCGCTATACACAT +
Preference number: 4 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLFLKHK*EVRYTH
Trigger: ATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAA...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTCCTGGCCTCTGTGGATaGGAACTCAGTACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSETQMGSALYTFLWLAFPGLCG*ELSTAG
Trigger: GCCAGCTGTACTGAGTTCTCATCCACAGAGGCCAGG...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTCCTGGCCTCTGTGGATaGGAACTCAGTACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLPGLCG*ELSTAG
Trigger: GCCAGCTGTACTGAGTTCTCATCCACAGAGGCCAGG...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCTATTCTACTCCTTTCTaGAACACAAATGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPYSTPF*NTNGKC
Trigger: GCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATA...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGCTAACTTGAGCTGCTaGTGTCACGATGACCATCCT +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRANLSC*CHDDHP
Trigger: AGGATGGTCATCGTGACAGCAGCAGCTCAAGTTAGC...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAAATGCTAACTTGAGCTaGTGCTGTCACGATGACCAT +
Preference number: 4 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIENANLS*CCHDDH
Trigger: ATGGTCATCGTGACAGCAGCAGCTCAAGTTAGCATT...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGTCCCAAACAGGCTGTTaGAGAATACAGAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRSQTGC*RIQSPG
Trigger: ACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGA...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGAATTTCCACCATAGATaGCCAAGGCCTCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRNFHHR*PRPLGG
Trigger: GCCTCCAAGAGGCCTTGGCCATCTATGGTGGAAATT...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTTGGGTCACAGCCAGCTaGTACCTCTCCCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLWVTAS*YLSQLK
Trigger: CTTCAGCTGGGAGAGGTACCAGCTGGCTGTGACCCA...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000617500.4
CDS-3UTR CCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAAGAACTCAGTACAGCTaGCATCAACAAGGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIERTQYS*HQQGSV
Trigger: CACTGAACCTTGTTGATGCCAGCTGTACTGAGTTCT...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGAGACGGAACTTGACTaGAAACTGAGGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLETELD*KLRAGG
Trigger: TCCCCCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTC...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTGAGACGGAACTTGACTaGAAACTGAGGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LSETQMGSALYTFLWLAFETELD*KLRAGG
Trigger: TCCCCCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTC...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGTTGGCTTCTCATCTTTaGTGCCCACCCTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRLASHL*CPPFVS
Trigger: GGAAACAAAGGGTGGGCATCAAAGATGAGAAGCCAA...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAGGGGCGTGGTGTACTTaGCCATGCCAAAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKGAWCT*PCQSLH
Trigger: ATGGAGGCTTTGGCATGGGCAAGTACACCACGCCCC...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAACGAGGATTGTCTTCTaGTTCATTTTCCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIETRIVF*FIFPRR
Trigger: TCTTCGTGGGAAAATGAACCAGAAGACAATCCTCGT...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCGTCATTGCTGCTaGGGAATTTCCACCATAGAT +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRGRHCC*GISTID
Trigger: ATCTATGGTGGAAATTCCCCAGCAGCAATGACGACC...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAACTGGCAACCCTACTCTaGGGTCTCCAGGGAATAGCC +
Preference number: 4 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKLATLL*GLQGIA
Trigger: GGCTATTCCCTGGAGACCCCAGAGTAGGGTTGCCAG...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTATGCCTGAATGTGATTaGACAGCCCCTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLMPECD*TAPPGW
Trigger: CCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCAT...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp CAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGTCCCTTTCTGAAACACAAATaGGAAGTGCGCTATACACAT +
Preference number: 4 (lower is better)
Translates to: QQTQGNDTQGLATLIRGPFLKHK*EVRYTH
Trigger: ATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAA...GGGACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTAGAGGAGACGGAACTTaGCTGAAAACTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLRGDGT*LKTEGW
Trigger: CCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTCCTCT...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTCTGCTGCTGTCACGATaGCCATCCTCCTCTATAGAG +
Preference number: 4 (lower is better)
Translates to: LSETQMGSALYTFLWLAFLLLSR*PSSSIE
Trigger: CTCTATAGAGGAGGATGGTCATCGTGACAGCAGCAG...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCTATTCTACTCCTTTCTaGAACACAAATGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VTMTILLYREHEAGRHKCYSTPF*NTNGKC
Trigger: GCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATA...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTATAGCGGGTCGTCATTaGTGCTGGGGAATTTCCACC +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLIAGRH*CWGIST
Trigger: GGTGGAAATTCCCCAGCAGCAATGACGACCCGCTAT...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR GCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGGGATTCGGGAGAAATTaGAGGATAGAAGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRGFGRN*RIEEKA
Trigger: TGCCTTCTCTTCTATCCTGCAATTTCTCCCGAATCC...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGAATGCTAACTTGAGCTaGTGCTGTCACGATGACCAT +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRNANLS*CCHDDH
Trigger: ATGGTCATCGTGACAGCAGCAGCTCAAGTTAGCATT...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCCACATTTCTGTGGCTTaGCTTTTTCACCTGAAGATT +
Preference number: 4 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFHISVA*LFHLKI
Trigger: AATCTTCAGGTGAAAAAGGCAAGCCACAGAAATGTG...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAACTCCAGTCCTGCACATaGCAGGGACGTGGTAGAATG +
Preference number: 4 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKLQSCT*QGRGRM
Trigger: CATTCTACCACGTCCCTGGCATGTGCAGGACTGGAG...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617500.4
CDS-3UTR CCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGCCATGGAGCTGTTTTaGGGCAGCGGCTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCAMELF*GSGSPA
Trigger: TGCTGGAGAGCCGCTGCCCCAAAACAGCTCCATGGC...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTACGAAGAGGGACAGCTaGTTCAACCAAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLTKRDS*FNQRRA
Trigger: TGCTCTCCTTTGGTTGAATCAGCTGTCCCTCTTCGT...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR TCA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCAGGCTGTATCAGAATTaGTTTAACCAGTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFRLYQN*FNQSFR
Trigger: TCTAAAGGACTGGTTAAATCAATTCTGATACAGCCT...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCAGGCTGTATCAGAATTaGTTTAACCAGTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: VTMTILLYREHEAGRHKCRLYQN*FNQSFR
Trigger: TCTAAAGGACTGGTTAAATCAATTCTGATACAGCCT...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGGCTAACTTGAGCTGCTaGTGTCACGATGACCATCCT +
Preference number: 4 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLANLSC*CHDDHP
Trigger: AGGATGGTCATCGTGACAGCAGCAGCTCAAGTTAGC...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp CTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGCCTTTTCCCAAACAGGCTGTTaGAGAATACAGAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LSETQMGSALYTFLWLAFSQTGC*RIQSPG
Trigger: ACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGA...AAAGGCAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTCCCAGCTCATTCGCATaGCTGAATGTGATTGGACAG +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLPSSFA*LNVIGQ
Trigger: CTGTCCAATCACATTCAGGCATGCGAATGAGCTGGG...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTTGGGTCACAGCCAGCTaGTACCTCTCCCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCWVTAS*YLSQLK
Trigger: CTTCAGCTGGGAGAGGTACCAGCTGGCTGTGACCCA...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000617500.4
CDS-3UTR CCA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGCAGAATACAGAGCCCTaGTACAAAATGGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRQNTEP*YKMAIL
Trigger: AAGAATGGCCATTTTGTACCAGGGCTCTGTATTCTG...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGAAGGGTCATTCTGATTaGAAACGCTGCTGCTACTGG +
Preference number: 4 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLKGHSD*KRCCYW
Trigger: CCAGTAGCAGCAGCGTTTTCAATCAGAATGACCCTT...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000617500.4
CDS-3UTR TCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGAGACGGAACTTGACTaGAAACTGAGGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCETELD*KLRAGG
Trigger: TCCCCCAGCCCTCAGTTTTCAGTCAAGTTCCGTCTC...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTAGGCTGTATCAGAATTaGTTTAACCAGTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAIRLYQN*FNQSFR
Trigger: TCTAAAGGACTGGTTAAATCAATTCTGATACAGCCT...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAGCTAACTTGAGCTGCTaGTGTCACGATGACCATCCT +
Preference number: 4 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKANLSC*CHDDHP
Trigger: AGGATGGTCATCGTGACAGCAGCAGCTCAAGTTAGC...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAATCCCAAACAGGCTGTTaGAGAATACAGAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKSQTGC*RIQSPG
Trigger: ACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGA...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTAGAATCGTATTTCTATaGCCCCACTGGGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLRIVFL*PHWGGR
Trigger: TCTTCCACCCCAGTGGGGCCATAGAAATACGATTCT...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTATGGACTTGCAGGACTaGCAACCCTACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCMDLQD*QPYSGV
Trigger: GACCCCAGAGTAGGGTTGCCAGTCCTGCAAGTCCAT...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAATTTCCAGCTCAGCTATaGACTTGCAGGACTGGCAAC +
Preference number: 4 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKFPAQL*TCRTGN
Trigger: GTTGCCAGTCCTGCAAGTCCATAGCTGAGCTGGAAA...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTAGCCCTGGTACAAAATaGCCATTCTTCATTATCATT +
Preference number: 4 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAISPGTK*PFFIII
Trigger: AATGATAATGAAGAATGGCCATTTTGTACCAGGGCT...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTATGCCTGAATGTGATTaGACAGCCCCTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCMPECD*TAPPGW
Trigger: CCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCAT...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTTTTCTGAAACACAAATaGGAAGTGCGCTATACACAT +
Preference number: 4 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAIFLKHK*EVRYTH
Trigger: ATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAA...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAAAGGGTCATTCTGATTaGAAACGCTGCTGCTACTGG +
Preference number: 4 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKKGHSD*KRCCYW
Trigger: CCAGTAGCAGCAGCGTTTTCAATCAGAATGACCCTT...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAATTGGCTTCTCATCTTTaGTGCCCACCCTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKLASHL*CPPFVS
Trigger: GGAAACAAAGGGTGGGCATCAAAGATGAGAAGCCAA...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGGGATTCGGGAGAAATTaGAGGATAGAAGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLGFGRN*RIEEKA
Trigger: TGCCTTCTCTTCTATCCTGCAATTTCTCCCGAATCC...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTTTTAGCCAAAGCTGTTaGCCCTCTTGCTTTCCACGC +
Preference number: 4 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCFSQSC*PSCFPR
Trigger: GCGTGGAAAGCAAGAGGGTCAACAGCTTTGGCTAAA...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591562.1
CDS-3UTR GCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTCCCAGCTCATTCGCATaGCTGAATGTGATTGGACAG +
Preference number: 4 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCPSSFA*LNVIGQ
Trigger: CTGTCCAATCACATTCAGGCATGCGAATGAGCTGGG...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTCAGAATACAGAGCCCTaGTACAAAATGGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: LLLSETQMGSALYTFLWLQNTEP*YKMAIL
Trigger: AAGAATGGCCATTTTGTACCAGGGCTCTGTATTCTG...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGATTCGGGAGAAATTaGAGGATAGAAGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCGFGRN*RIEEKA
Trigger: TGCCTTCTCTTCTATCCTGCAATTTCTCCCGAATCC...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR GCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTAGGGACGTGGTAGAATaGAAAGAGATCCTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCRDVVE*KEILQN
Trigger: GTTTTGGAGGATCTCTTTGCATTCTACCACGTCCCT...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617500.4
CDS-3UTR CCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGAGCCCTGGTACAAAATaGCCATTCTTCATTATCATT +
Preference number: 4 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLSPGTK*PFFIII
Trigger: AATGATAATGAAGAATGGCCATTTTGTACCAGGGCT...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGTTTCTGAAACACAAATaGGAAGTGCGCTATACACAT +
Preference number: 4 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLFLKHK*EVRYTH
Trigger: ATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAA...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR TCA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAAAGGCTGTATCAGAATTaGTTTAACCAGTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKRLYQN*FNQSFR
Trigger: TCTAAAGGACTGGTTAAATCAATTCTGATACAGCCT...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTACGAGGATTGTCTTCTaGTTCATTTTCCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCTRIVF*FIFPRR
Trigger: TCTTCGTGGGAAAATGAACCAGAAGACAATCCTCGT...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR TCA 90 bp ATATTCTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTTATTCTACTCCTTTCTaGAACACAAATGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: IFYSFLKHKWEVRYTHFCYSTPF*NTNGKC
Trigger: GCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATA...ACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAGAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAAAGACGGGGGCTCTGTaGGCTCCTGGACGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIEKTGAL*APGRGG
Trigger: CCCACCCCGTCCAGGAGCCAACAGAGCCCCCGTCTT...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CAA 90 bp GCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCAAGACGGGGGCTCTGTaGGCTCCTGGACGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: ASQTGCCRIQSPGTKWPFKTGAL*APGRGG
Trigger: CCCACCCCGTCCAGGAGCCAACAGAGCCCCCGTCTT...GAATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CAA 90 bp TTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGGAGTTGCTCCCAAACAGGCTGTaGCAGAATACAGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: FACLNVIGQPLLAGWLELLPNRL*QNTEPW
Trigger: CCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAG...CAACTCCAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAAGGGGCGTGGTGTACTaGCCCATGCCAAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIERGVVY*PMPKPP
Trigger: TGGAGGCTTTGGCATGGGCAAGTACACCACGCCCCT...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CAA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTAGGGGCGTGGTGTACTaGCCCATGCCAAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAIRGVVY*PMPKPP
Trigger: TGGAGGCTTTGGCATGGGCAAGTACACCACGCCCCT...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CAA 90 bp GGGCTGGGACATAGGGATATCCCCTCAGGATTCGGGAGAAATTGCAGGATAGAAAGCTCAGCTATGGACTaGCAGGACTGGCAACCCTAC +
Preference number: 5 (lower is better)
Translates to: GLGHRDIPSGFGRNCRIESSAMD*QDWQPY
Trigger: GTAGGGTTGCCAGTCCTGCAAGTCCATAGCTGAGCT...TTCTATCCTGCAATTTCTCCCGAATCCTGAGGGGATATCCCTATGTCCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS TCA 90 bp AAAGAGATCCTCCAAAACACCACCACCACAGGCCAGACACAGAACTaGGCTGACAAACAGAAGGCTGCTCCCAGCAGCAGAGCCCATATA +
Preference number: 5 (lower is better)
Translates to: KEILQNTTTTGQTQN*ADKQKAAPSSRAHI
Trigger: TATATGGGCTCTGCTGCTGGGAGCAGCCTTCTGTTTGTCAGCTCAGTTCTGTGTCTGGCCTGTGGTGGTGGTGTTTTGGAGGATCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617500.4
CDS-3UTR CAA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTCTCCCAAACAGGCTGTaGCAGAATACAGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAILPNRL*QNTEPW
Trigger: CCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAG...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTTTTGATGCCCACCCTTaGTTTCCACTCCAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAIFDAHP*FPLQPP
Trigger: GGGAGGCTGGAGTGGAAACAAAGGGTGGGCATCAAA...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp AGCTCATTCGCATGCCTGAATGTGATTGGACAGCCCCTCCTGGCTGGGTGGCTGACACATTTCTGTGGCTaGCCTTTTTCACCTGAAGAT +
Preference number: 5 (lower is better)
Translates to: SSFACLNVIGQPLLAGWLTHFCG*PFSPED
Trigger: ATCTTCAGGTGAAAAAGGCAAGCCACAGAAATGTGT...CAGCCACCCAGCCAGGAGGGGCTGTCCAATCACATTCAGGCATGCGAATGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCGATGGCCAAGGCCTCTaGGAGGCTTATCTCATAAAC +
Preference number: 5 (lower is better)
Translates to: VTMTILLYREHEAGRHKCDGQGL*EAYLIN
Trigger: GTTTATGAGATAAGCCTCCAAGAGGCCTTGGCCATC...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CAA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTAACGACACACAGGGATaGGCCACTCTGATTAGGGGT +
Preference number: 5 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAINDTQG*ATLIRG
Trigger: ACCCCTAATCAGAGTGGCCAATCCCTGTGTGTCGTT...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGCTCCCAAACAGGCTGTaGCAGAATACAGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRLPNRL*QNTEPW
Trigger: CCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAG...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGTTTGATGCCCACCCTTaGTTTCCACTCCAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRFDAHP*FPLQPP
Trigger: GGGAGGCTGGAGTGGAAACAAAGGGTGGGCATCAAA...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS CCA 90 bp CCACATAGCGGGTCGTCATTGCTGCTGGGGAATTTCCACCATAGATaGCCAAGGCCTCTTGGAGGCTTATCTCATAAACTAGTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: PHSGSSLLLGNFHHR*PRPLGGLSHKLVFL
Trigger: GAGAAAGACTAGTTTATGAGATAAGCCTCCAAGAGGCCTTGGCCATCTATGGTGGAAATTCCCCAGCAGCAATGACGACCCGCTATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CAA 90 bp GTCACGATGACCATCCTCCTCTATAGAGAGCATGAGGCAGGCAGACACAAATGCAGGATTCGGGAGAAATaGCAGGATAGAAGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: VTMTILLYREHEAGRHKCRIREK*QDRREG
Trigger: GCCTTCTCTTCTATCCTGCAATTTCTCCCGAATCCT...GCATTTGTGTCTGCCTGCCTCATGCTCTCTATAGAGGAGGATGGTCATCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS TCA 90 bp CACGAGGATTGTCTTCTGGTTCATTTTCCCACGAAGAGGGACAGCTaGTTCAACCAAAGGAGAGCAATGTATTCTCACGCCAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: HEDCLLVHFPTKRDS*FNQRRAMYSHASKT
Trigger: CGTCTTGCTGGCGTGAGAATACATTGCTCTCCTTTGGTTGAATCAGCTGTCCCTCTTCGTGGGAAAATGAACCAGAAGACAATCCTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS CCA 90 bp AAGATGGTGATGACGGCCAGAATGAGGAGCACGAGGATTGTCTTCTaGTTCATTTTCCCACGAAGAGGGACAGCTGATTCAACCAAAGGA +
Preference number: 5 (lower is better)
Translates to: KMVMTARMRSTRIVF*FIFPRRGTADSTKG
Trigger: TCCTTTGGTTGAATCAGCTGTCCCTCTTCGTGGGAAAATGAACCAGAAGACAATCCTCGTGCTCCTCATTCTGGCCGTCATCACCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CAA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTAGGATTCGGGAGAAATaGCAGGATAGAAGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAIRIREK*QDRREG
Trigger: GCCTTCTCTTCTATCCTGCAATTTCTCCCGAATCCT...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp TACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGAGCTCAGCTATGGACTaGCAGGACTGGCAACCCTAC +
Preference number: 5 (lower is better)
Translates to: YSFLKHKWEVRYTHFCGLSSAMD*QDWQPY
Trigger: GTAGGGTTGCCAGTCCTGCAAGTCCATAGCTGAGCT...CAAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTCTCCCAAACAGGCTGTaGCAGAATACAGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LLLSETQMGSALYTFLWLLPNRL*QNTEPW
Trigger: CCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAG...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTTTTGATGCCCACCCTTaGTTTCCACTCCAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LLLSETQMGSALYTFLWLFDAHP*FPLQPP
Trigger: GGGAGGCTGGAGTGGAAACAAAGGGTGGGCATCAAA...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAACATAGCGGGTCGTCATaGCTGCTGGGGAATTTCCAC +
Preference number: 5 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKHSGSS*LLGNFH
Trigger: GTGGAAATTCCCCAGCAGCAATGACGACCCGCTATG...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CAA 90 bp AGCCTCCCAAACAGGCTGTTGCAGAATACAGAGCCCTGGTACAAAATGGCCATTACACATTTCTGTGGCTaGCCTTTTTCACCTGAAGAT +
Preference number: 5 (lower is better)
Translates to: SLPNRLLQNTEPWYKMAITHFCG*PFSPED
Trigger: ATCTTCAGGTGAAAAAGGCAAGCCACAGAAATGTGT...AATGGCCATTTTGTACCAGGGCTCTGTATTCTGCAACAGCCTGTTTGGGAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTAAGCTGTTGACCCTCTaGCTTTCCACGCAGACAGAC +
Preference number: 5 (lower is better)
Translates to: LLLSETQMGSALYTFLWLKLLTL*LSTQTD
Trigger: GTCTGTCTGCGTGGAAAGCAAGAGGGTCAACAGCTT...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591562.1
CDS-3UTR CAA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTGATGGCCAAGGCCTCTaGGAGGCTTATCTCATAAAC +
Preference number: 5 (lower is better)
Translates to: LLLSETQMGSALYTFLWLDGQGL*EAYLIN
Trigger: GTTTATGAGATAAGCCTCCAAGAGGCCTTGGCCATC...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS-3UTR CAA 90 bp AATAAGCAACAGACACAAGGGAACGACACACAGGGATTGGCCACTCTGATTAGGACACATTTCTGTGGCTaGCCTTTTTCACCTGAAGAT +
Preference number: 5 (lower is better)
Translates to: NKQQTQGNDTQGLATLIRTHFCG*PFSPED
Trigger: ATCTTCAGGTGAAAAAGGCAAGCCACAGAAATGTGT...CCTAATCAGAGTGGCCAATCCCTGTGTGTCGTTCCCTTGTGTCTGTTGCTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp CCTGGTACAAAATGGCCATTCTTCATTATCATTGCACCCCCAAATCACTTGAAATCTCTTGCTATTTCTTaGTCCCCATCCCCAATCCAG +
Preference number: 5 (lower is better)
Translates to: PGTKWPFFIIIAPPNHLKSLAIS*SPSPIQ
Trigger: CTGGATTGGGGATGGGGACAAAGAAATAGCAAGAGA...TTTCAAGTGATTTGGGGGTGCAATGATAATGAAGAATGGCCATTTTGTACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS-3UTR CAA 90 bp CTACTCCTTTCTGAAACACAAATGGGAAGTGCGCTATACACATTTCTGTGGCTTACACATTTCTGTGGCTaGCCTTTTTCACCTGAAGAT +
Preference number: 5 (lower is better)
Translates to: LLLSETQMGSALYTFLWLTHFCG*PFSPED
Trigger: ATCTTCAGGTGAAAAAGGCAAGCCACAGAAATGTGT...AAGCCACAGAAATGTGTATAGCGCACTTCCCATTTGTGTTTCAGAAAGGAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308423.7
ENST00000591562.1
ENST00000613571.1
ENST00000617500.4
CDS GCA 72 bp TTCTCCAGTCCTGCACATGCCAGGGACGTGGTAGAATaGAAAGAGATCCTCCAAAACACCACCACCACAGGC +
Preference number: 6 (lower is better)
Translates to: FSSPAHARDVVE*KEILQNTTTTG
Trigger: GCCTGTGGTGGTGGTGTTTTGGAGGATCTCTTTGCATTCTACCACGTCCCTGGCATGTGCAGGACTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592999.5
ENST00000617500.4
CDS TCA 72 bp GAGAGGACTGTACTCGTCCCTGGGGATAGAGATGAATaGTCATCCTTACCCTCTTGCTTTCCACGCAGACAG +
Preference number: 6 (lower is better)
Translates to: ERTVLVPGDRDE*SSLPSCFPRRQ
Trigger: CTGTCTGCGTGGAAAGCAAGAGGGTAAGGATGATCATTCATCTCTATCCCCAGGGACGAGTACAGTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588033.1
CDS CCA 72 bp ATGACGGCCAGAATGAGGAGCACGAGGATTGTCTTCTaGTTCATTTTCCCACGAAGAGGGACAGCTGATTCA +
Preference number: 6 (lower is better)
Translates to: MTARMRSTRIVF*FIFPRRGTADS
Trigger: TGAATCAGCTGTCCCTCTTCGTGGGAAAATGAACCAGAAGACAATCCTCGTGCTCCTCATTCTGGCCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS CCA 72 bp GGGTCGTCATTGCTGCTGGGGAATTTCCACCATAGATaGCCAAGGCCTCTTGGAGGCTTATCTCATAAACTA +
Preference number: 6 (lower is better)
Translates to: GSSLLLGNFHHR*PRPLGGLSHKL
Trigger: TAGTTTATGAGATAAGCCTCCAAGAGGCCTTGGCCATCTATGGTGGAAATTCCCCAGCAGCAATGACGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1
CDS TCA 72 bp TGTCTTCTGGTTCATTTTCCCACGAAGAGGGACAGCTaGTTCAACCAAAGGAGAGCAATGTATTCTCACGCC +
Preference number: 6 (lower is better)
Translates to: CLLVHFPTKRDS*FNQRRAMYSHA
Trigger: GGCGTGAGAATACATTGCTCTCCTTTGGTTGAATCAGCTGTCCCTCTTCGTGGGAAAATGAACCAGAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308423.7
ENST00000613571.1