Pregenerated sensors for AOAH-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000230539

Ensembl transcript IDs: ENST00000449672.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATCATCCCCATTAGGATTTCAGCTGGAGTGGACAGTGGCTGGTGCTaGATCACAACTGGGGCCAGGGTGAGTTTGTATTCCTCAGCGGGA	+
Preference number: 5 (lower is better) Translates to: IIPIRISAGVDSGWC*ITTGARVSLYSSAG Trigger: TCCCGCTGAGGAATACAAACTCACCCTGGCCCCAGTTGTGATTCAGCACCAGCCACTGTCCACTCCAGCTGAAATCCTAATGGGGATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449672.1
CDS CCA 90 bp	TCTGCTCAGGTCCCCACCGCTCCCATTACCTTAGTGCCTTTCTTGTaGGAGCACCACATTATGCAACTTTCAGAGCCTTCCTTGGCTTTC	+
Preference number: 5 (lower is better) Translates to: SAQVPTAPITLVPFL*EHHIMQLSEPSLAF Trigger: GAAAGCCAAGGAAGGCTCTGAAAGTTGCATAATGTGGTGCTCCCACAAGAAAGGCACTAAGGTAATGGGAGCGGTGGGGACCTGAGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449672.1
CDS GCA 72 bp	CGCTTGCAGAAGGTAAGCAGGGTTCCTCCTGCTTTCTaGCTCTCAGTCCCACCGTGCCACCACACTGCCTCC	+
Preference number: 6 (lower is better) Translates to: RLQKVSRVPPAF*LSVPPCHHTAS Trigger: GGAGGCAGTGTGGTGGCACGGTGGGACTGAGAGGCAGAAAGCAGGAGGAACCCTGCTTACCTTCTGCAAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449672.1
CDS CCA 72 bp	AGCTGGAGTGGACAGTGGCTGGTGCTGAATCACAACTaGGGCCAGGGTGAGTTTGTATTCCTCAGCGGGAGC	+
Preference number: 6 (lower is better) Translates to: SWSGQWLVLNHN*GQGEFVFLSGS Trigger: GCTCCCGCTGAGGAATACAAACTCACCCTGGCCCCAGTTGTGATTCAGCACCAGCCACTGTCCACTCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449672.1
CDS CCA 72 bp	GTCCCCACCGCTCCCATTACCTTAGTGCCTTTCTTGTaGGAGCACCACATTATGCAACTTTCAGAGCCTTCC	+
Preference number: 6 (lower is better) Translates to: VPTAPITLVPFL*EHHIMQLSEPS Trigger: GGAAGGCTCTGAAAGTTGCATAATGTGGTGCTCCCACAAGAAAGGCACTAAGGTAATGGGAGCGGTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449672.1
CDS CCA 72 bp	GTCTTGGAATCATCCCCATTAGGATTTCAGCTGGAGTaGACAGTGGCTGGTGCTGAATCACAACTGGGGCCA	+
Preference number: 6 (lower is better) Translates to: VLESSPLGFQLE*TVAGAESQLGP Trigger: TGGCCCCAGTTGTGATTCAGCACCAGCCACTGTCCACTCCAGCTGAAATCCTAATGGGGATGATTCCAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449672.1
CDS CAA 72 bp	CAGGTCCCCACCGCTCCCATTACCTTAGTGCCTTTCTaGTGGGAGCACCACATTATGCAACTTTCAGAGCCT	+
Preference number: 6 (lower is better) Translates to: QVPTAPITLVPF*WEHHIMQLSEP Trigger: AGGCTCTGAAAGTTGCATAATGTGGTGCTCCCACAAGAAAGGCACTAAGGTAATGGGAGCGGTGGGGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449672.1
CDS TCA 72 bp	ATTAGGATTTCAGCTGGAGTGGACAGTGGCTGGTGCTaGATCACAACTGGGGCCAGGGTGAGTTTGTATTCC	+
Preference number: 6 (lower is better) Translates to: IRISAGVDSGWC*ITTGARVSLYS Trigger: GGAATACAAACTCACCCTGGCCCCAGTTGTGATTCAGCACCAGCCACTGTCCACTCCAGCTGAAATCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449672.1