RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AOAH (Homo sapiens)

Ensembl gene IDs: ENSG00000136250

Ensembl transcript IDs: ENST00000414637.1, ENST00000435386.1, ENST00000480201.1, ENST00000487014.5, ENST00000491444.5, ENST00000495942.5, ENST00000543742.1, ENST00000612871.4, ENST00000614254.1, ENST00000617267.4, ENST00000617537.5, ENST00000621510.1

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGAAGGGTTACTaGTCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTC +
Preference number: 1 (lower is better)
Translates to: KALYERLFQEQRKGY*SREHTALHSRPDML
Trigger: GAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR TCA 90 bp GGGCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATaGAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGA +
Preference number: 1 (lower is better)
Translates to: GHRYSLVWNGTQSTL*KVISGTAEGLLIPG
Trigger: TCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR GCA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTaGACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATTTT +
Preference number: 1 (lower is better)
Translates to: FRNSGRVTDPGSTQH*TVVQICSSLRERHF
Trigger: AAAATGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR GCA 90 bp TTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATTTTaGAAAGATGCTGCTGAAGAAGAGTCCTTTGGGCCTGTGACGTGG +
Preference number: 1 (lower is better)
Translates to: LHSRPDMLFIERKTF*KDAAEEESFGPVTW
Trigger: CCACGTCACAGGCCCAAAGGACTCTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR-3UTR TCA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCAGTCCTTTGGGCCTGTaGCGTGGCAGCCCCCATAGG +
Preference number: 2 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVSPLGL*RGSPHR
Trigger: CCTATGGGGGCTGCCACGTCACAGGCCCAAAGGACT...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR-3UTR TCA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCTTGCAAAGATGCTGCTaGAGAAGAGTCCTTTGGGCC +
Preference number: 2 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVLQRCC*RRVLWA
Trigger: GGCCCAAAGGACTCTTCTTCAGCAGCATCTTTGCAA...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR-3UTR TCA 90 bp CAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGTCCTTTGGGCCTGTaGCGTGGCAGCCCCCATAGG +
Preference number: 2 (lower is better)
Translates to: QILSCLEWHPKHFMKGYFSPLGL*RGSPHR
Trigger: CCTATGGGGGCTGCCACGTCACAGGCCCAAAGGACT...GAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR-3UTR TCA 90 bp CAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCCAGCGGAAGGGTTACTaGTCCCGGGAGCACACAGCA +
Preference number: 2 (lower is better)
Translates to: QILSCLEWHPKHFMKGYFQRKGY*SREHTA
Trigger: TGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTG...GAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR-3UTR GCA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGGGGAGCACACAGCATTaGACAGTCGTCCAGATATGC +
Preference number: 2 (lower is better)
Translates to: LLFGMAPKALYERLFQEQGSTQH*TVVQIC
Trigger: GCATATCTGGACGACTGTGCAATGCTGTGTGCTCCC...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR-3UTR TCA 90 bp CAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCTTGCAAAGATGCTGCTaGAGAAGAGTCCTTTGGGCC +
Preference number: 2 (lower is better)
Translates to: QILSCLEWHPKHFMKGYFLQRCC*RRVLWA
Trigger: GGCCCAAAGGACTCTTCTTCAGCAGCATCTTTGCAA...GAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR-3UTR TCA 90 bp ATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGAGTATAGGGTTTGTGGAATaGGTTTACCCAAGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: ICSSLRERHFAKMLLKKSIGFVE*VYPSLC
Trigger: GCAGAGGCTTGGGTAAACTCATTCCACAAACCCTAT...ACTCTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR-3UTR GCA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATACAGTCGTCCAGATATaGTCTTCATTGAGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYTVVQI*SSLRER
Trigger: TCTTTCTCTCAATGAAGAGCATATCTGGACGACTGT...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR CAA 90 bp AAACTCCTTTTAGAACAATTAGCTGTAAAGGGCACAGATACTCTCTaGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAG +
Preference number: 2 (lower is better)
Translates to: KLLLEQLAVKGTDTL*FGMAPKALYERLFQ
Trigger: CTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGCCCTTTACAGCTAATTGTTCTAAAAGGAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR-3UTR GCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTACAGTCGTCCAGATATaGTCTTCATTGAGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: TDTLLFGMAPKALYERLFTVVQI*SSLRER
Trigger: TCTTTCTCTCAATGAAGAGCATATCTGGACGACTGT...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR GCA 72 bp AGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTaGACAGTCGTCCAGATATGCTCTTCATTGAGAGAA +
Preference number: 3 (lower is better)
Translates to: SGRVTDPGSTQH*TVVQICSSLRE
Trigger: TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR TCA 72 bp TATGAAAGGTTATTTCAGGAACAGCGGAAGGGTTACTaGTCCCGGGAGCACACAGCATTGCACAGTCGTCCA +
Preference number: 3 (lower is better)
Translates to: YERLFQEQRKGY*SREHTALHSRP
Trigger: TGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR TCA 72 bp TACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATaGAAGGTTATTTCAGGAACAGCGGAAGGGTTACTG +
Preference number: 3 (lower is better)
Translates to: YSLVWNGTQSTL*KVISGTAEGLL
Trigger: CAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAAGCCGTGGCAGGGGCTaGCCTGGAGGCAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: DPGSTQHCTVVQICSSLRSRGRG*PGGSSG
Trigger: TCCTGAACTGCCTCCAGGTCAGCCCCTGCCACGGCT...TCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGCCGTGGCAGGGGCTaGCCTGGAGGCAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PGSTQHCTVVQICSSLRESRGRG*PGGSSG
Trigger: TCCTGAACTGCCTCCAGGTCAGCCCCTGCCACGGCT...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAAGGGGTGCATGCTCCTaGGAGGCTCAGTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: DPGSTQHCTVVQICSSLRRGACS*EAQCPP
Trigger: AGGCGGGCACTGAGCCTCTCAGGAGCATGCACCCCT...TCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGCTATGCACCCCAAGTaGTCACCCGGCTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVAMHPK*SPGFGS
Trigger: GCTTCCAAAGCCGGGTGATCACTTGGGGTGCATAGC...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp AACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGGGAGAGGCCGAGGACTaGAGAGACAGGAGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: NSGRVTDPGSTQHCTVVQGEAED*RDRSKN
Trigger: ATTCTTGCTCCTGTCTCTTCAGTCCTCGGCCTCTCC...CTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCAGCGGAAGGGTTACTaGTCCCGGGAGCACACAGCA +
Preference number: 4 (lower is better)
Translates to: EGLLIPGAHSIAQSSRYAQRKGY*SREHTA
Trigger: TGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTG...AGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATACGGGCTCGATGAGCTaGCAGGGCTGTCCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHTGSMS*QGCPPL
Trigger: GAGAGGCGGACAGCCCTGGCAGCTCATCGAGCCCGT...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp TCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCGCAACGTCTTGTTaGAAGACATCCAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SGTAEGLLIPGAHSIAQSSATSC*KTSSRG
Trigger: GCCACGGCTGGATGTCTTCCAACAAGACGTTGCGGA...CGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAACAGCGGAAGGGTTACTaGTCCCGGGAGCACACAGCA +
Preference number: 4 (lower is better)
Translates to: PGSTQHCTVVQICSSLREQRKGY*SREHTA
Trigger: TGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTG...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp GATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGACACCCTACACAGGTGTaGCCATTCGAGAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DPGSTQHCTVVQICSSLRHPTQV*PFERLG
Trigger: GCCCAGCCTCTCGAATGGGCACACCTGTGTAGGGTG...TCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617537.5
CDS-3UTR CCA 90 bp GAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTGGTCATCGTTGGCTaGAGAGGCCGAGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: EGLLIPGAHSIAQSSRYALVIVG*RGRGLK
Trigger: CTTCAGTCCTCGGCCTCTCCAGCCAACGATGACCAG...AGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGGTGTGCGGTTCTGCTaGGGTAAAGACTGCAGGATA +
Preference number: 4 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVGVRFC*GKDCRI
Trigger: TATCCTGCAGTCTTTACCTCAGCAGAACCGCACACC...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp GAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACAACGGGCTCGATGAGCTaGCAGGGCTGTCCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: EHTALHSRPDMLFIERKTTGSMS*QGCPPL
Trigger: GAGAGGCGGACAGCCCTGGCAGCTCATCGAGCCCGT...TGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAACTGGTCATCGTTGGCTaGAGAGGCCGAGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: PGSTQHCTVVQICSSLRELVIVG*RGRGLK
Trigger: CTTCAGTCCTCGGCCTCTCCAGCCAACGATGACCAG...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp ATGAAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGGCCCATTCGAGAGGCTaGGCCTGGACTGGTCATCGT +
Preference number: 4 (lower is better)
Translates to: MKGYFRNSGRVTDPGSTQAHSRG*AWTGHR
Trigger: ACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGC...CTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAGGTCATGGCTGGGACTaGGTCACTCTTCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: PGSTQHCTVVQICSSLREGHGWD*VTLPTA
Trigger: TGCAGTGGGAAGAGTGACCCAGTCCCAGCCATGACC...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp GATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGATCCTTTCCCAGGATTTaGGGCCACTGGAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: DPGSTQHCTVVQICSSLRSFPRI*GHWSCT
Trigger: GGTGCAGCTCCAGTGGCCCCAAATCCTGGGAAAGGA...TCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ATGAAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGGCTATGCACCCCAAGTaGTCACCCGGCTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: MKGYFRNSGRVTDPGSTQAMHPK*SPGFGS
Trigger: GCTTCCAAAGCCGGGTGATCACTTGGGGTGCATAGC...CTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp TCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGGCTTCAGAGTCTGCATaGCGTTGGAGTAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SGTAEGLLIPGAHSIAQSASESA*RWSRVS
Trigger: AGAAACTCTACTCCAACGTCATGCAGACTCTGAAGC...CGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp GAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTACAGCTTGCTCTTGTTaGACCCTGAGAGAGCCACAC +
Preference number: 4 (lower is better)
Translates to: EGLLIPGAHSIAQSSRYATACSC*TLREPH
Trigger: GTGTGGCTCTCTCAGGGTCCAACAAGAGCAAGCTGT...AGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp ATGAAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGTGGACTGGTCATCGTTaGCTGGAGAGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: MKGYFRNSGRVTDPGSTQWTGHR*LERPRT
Trigger: AGTCCTCGGCCTCTCCAGCCAACGATGACCAGTCCA...CTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp GATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAACCCAAGTTGCACAGTaGCACAACTTCCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: DPGSTQHCTVVQICSSLRTQVAQ*HNFRAP
Trigger: GGGAGCACGGAAGTTGTGCCACTGTGCAACTTGGGT...TCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp ATGAAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGAGGAGTGGTCATGGCTaGGACTGGGTCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: MKGYFRNSGRVTDPGSTQRSGHG*DWVTLP
Trigger: GGGAAGAGTGACCCAGTCCCAGCCATGACCACTCCT...CTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp AACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGTTTTCTGGCAGATCTTaGCCAAAACCGGGAGTGAAC +
Preference number: 4 (lower is better)
Translates to: NSGRVTDPGSTQHCTVVQFSGRS*PKPGVN
Trigger: GTTCACTCCCGGTTTTGGCCAAGATCTGCCAGAAAA...CTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTCCTTTCCCAGGATTTaGGGCCACTGGAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHSFPRI*GHWSCT
Trigger: GGTGCAGCTCCAGTGGCCCCAAATCCTGGGAAAGGA...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGCTCTTGTTGGACCCTaGGAGAGCCACACACAAAGA +
Preference number: 4 (lower is better)
Translates to: DPGSTQHCTVVQICSSLRALVGP*ESHTQR
Trigger: TCTTTGTGTGTGGCTCTCTCAGGGTCCAACAAGAGC...TCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp AACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGGGCTGCAGAATCAATTaGTCTCTCTCTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: NSGRVTDPGSTQHCTVVQGCRIN*SLSPSL
Trigger: AAGAGAAGGAGAGAGAGATCAATTGATTCTGCAGCC...CTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp TCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGCAAAACTCCAGAGTGTaGCATACCACATCAGCATTC +
Preference number: 4 (lower is better)
Translates to: SGTAEGLLIPGAHSIAQSQNSRV*HTTSAF
Trigger: GAATGCTGATGTGGTATGTCACACTCTGGAGTTTTG...CGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTGGCCAAAACCGGGAGTaGACAAATGTCAGAACCACT +
Preference number: 4 (lower is better)
Translates to: EGLLIPGAHSIAQSSRYAGQNRE*TNVRTT
Trigger: AGTGGTTCTGACATTTGTTCACTCCCGGTTTTGGCC...AGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGAAGGGGTGCATGCTCCTaGGAGGCTCAGTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGRGACS*EAQCPP
Trigger: AGGCGGGCACTGAGCCTCTCAGGAGCATGCACCCCT...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATCATCCACGGGCTCGATaGGCTGCCAGGGCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYHPRAR*AARAVR
Trigger: GCGGACAGCCCTGGCAGCTCATCGAGCCCGTGGATG...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCATCCACGGGCTCGATaGGCTGCCAGGGCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: LLFGMAPKALYERLFQEQHPRAR*AARAVR
Trigger: GCGGACAGCCCTGGCAGCTCATCGAGCCCGTGGATG...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGGGAGTCTGTGGTGTaGGGTTCTGCTGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: PGSTQHCTVVQICSSLRERESVV*GSAEVK
Trigger: CTTTACCTCAGCAGAACCGCACACCACAGACTCCCT...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATCCACACACAAAGAGCTaGAGGGAGTCTGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHPHTKS*RESVVC
Trigger: GCACACCACAGACTCCCTCCAGCTCTTTGTGTGTGG...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGGATTTGGGGCCACTaGAGCTGCACCTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PGSTQHCTVVQICSSLRERIWGH*SCTFFQ
Trigger: CTGGAAAAAGGTGCAGCTCCAGTGGCCCCAAATCCT...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAGCTCAGTGCCCGCCTTaGTCTCCAAACACCTGTTTA +
Preference number: 4 (lower is better)
Translates to: PGSTQHCTVVQICSSLREAQCPP*SPNTCL
Trigger: TAAACAGGTGTTTGGAGACCAAGGCGGGCACTGAGC...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCTGGAACTCCATCTTTTaGATCGACACCCCAAATGCC +
Preference number: 4 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVWNSIF*IDTPNA
Trigger: GGCATTTGGGGTGTCGATCCAAAAGATGGAGTTCCA...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGGCTGCAGAATCAATTaGTCTCTCTCTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVGCRIN*SLSPSL
Trigger: AAGAGAAGGAGAGAGAGATCAATTGATTCTGCAGCC...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTTGCTCTGCTCTCTCTaGAGTGAGAGTCCGCAACGT +
Preference number: 4 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHLLCSL*SESPQR
Trigger: ACGTTGCGGACTCTCACTTCAGAGAGAGCAGAGCAA...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATAGTCTCCCAGCAAAATaGTTCCCCTGGGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHSLPAK*FPWAVN
Trigger: GTTCACAGCCCAGGGGAATCATTTTGCTGGGAGACT...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp ACCAGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCCTGGCTACACAGGTGTaGCCATTCGAGAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TSTHHIWAFLLNFTQRNPLATQV*PFERLG
Trigger: GCCCAGCCTCTCGAATGGGCACACCTGTGTAGCCAG...GGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CCA 90 bp ACCAGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCGCCCATTCGAGAGGCTaGGCCTGGACTGGTCATCGT +
Preference number: 4 (lower is better)
Translates to: TSTHHIWAFLLNFTQRNPAHSRG*AWTGHR
Trigger: ACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGC...GGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CCA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATAGAGTTTCTCAGGAGTaGTCATGGCTGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHRVSQE*SWLGLG
Trigger: ACCCAGTCCCAGCCATGACCACTCCTGAGAAACTCT...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ACCAGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCTTGGAAGCTCCCAACTaGGGGATGCTGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TSTHHIWAFLLNFTQRNPLEAPN*GMLELR
Trigger: CCTCAGCTCCAGCATCCCTCAGTTGGGAGCTTCCAA...GGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR TCA 90 bp AACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGAGATGCACCATTTCTTaGAATATTCTGGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: NSGRVTDPGSTQHCTVVQRCTIS*NILVVP
Trigger: AGGGACTACCAGAATATTTCAAGAAATGGTGCATCT...CTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp TCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGAGATGCACCATTTCTTaGAATATTCTGGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SGTAEGLLIPGAHSIAQSRCTIS*NILVVP
Trigger: AGGGACTACCAGAATATTTCAAGAAATGGTGCATCT...CGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTAGCTGGCCGAGAGGATaGTATCTGTTGTGCAAATTA +
Preference number: 4 (lower is better)
Translates to: EGLLIPGAHSIAQSSRYASWPRG*YLLCKL
Trigger: TAATTTGCACAACAGATATCATCCTCTCGGCCAGCT...AGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp AACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGAACGCTGTATTTGTCTaGATCCACATCTTTGAATGG +
Preference number: 4 (lower is better)
Translates to: NSGRVTDPGSTQHCTVVQNAVFV*IHIFEW
Trigger: CCATTCAAAGATGTGGATTCAGACAAATACAGCGTT...CTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp TCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGAACGCTGTATTTGTCTaGATCCACATCTTTGAATGG +
Preference number: 4 (lower is better)
Translates to: SGTAEGLLIPGAHSIAQSNAVFV*IHIFEW
Trigger: CCATTCAAAGATGTGGATTCAGACAAATACAGCGTT...CGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp ACCAGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCGTGGCTTCTCAGCACTaGTGGCTACACAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: TSTHHIWAFLLNFTQRNPVASQH*WLHRCA
Trigger: GGCACACCTGTGTAGCCAGCAGTGCTGAGAAGCCAC...GGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR GCA 90 bp GGCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATGTGCTCCCCAGGGGTaGATGCTCCTGAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GTDTLLFGMAPKALYERLCAPQG*MLLRGS
Trigger: TGAGCCTCTCAGGAGCATGCACCCCTGGGGAGCACA...TAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp GAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACAGTAGCACCAGAGAGTTaGGGCCAGTCAAGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: EHTALHSRPDMLFIERKTVAPES*GQSSSL
Trigger: CAACGAGCTTGACTGGCCCCAACTCTCTGGTGCTAC...TGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGGCCACCTCGTTGGGGTaGAATCCATCCACGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LLFGMAPKALYERLFQEQATSLG*NPSTGS
Trigger: CGAGCCCGTGGATGGATTCCACCCCAACGAGGTGGC...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp GATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGATGGAACTCCATCTTTTaGATCGACACCCCAAATGCC +
Preference number: 4 (lower is better)
Translates to: DPGSTQHCTVVQICSSLRWNSIF*IDTPNA
Trigger: GGCATTTGGGGTGTCGATCCAAAAGATGGAGTTCCA...TCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCAGATACTCTCTTGTTTaGAATGGCACCCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVRYSLV*NGTQST
Trigger: AGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCT...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ACCAGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCGGAGAGGCCGAGGACTaGAGAGACAGGAGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: TSTHHIWAFLLNFTQRNPGEAED*RDRSKN
Trigger: ATTCTTGCTCCTGTCTCTTCAGTCCTCGGCCTCTCC...GGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR TCA 90 bp GAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACACTGCTCTCTCTGAAGTaGGAGTCCGCAACGTCTTGT +
Preference number: 4 (lower is better)
Translates to: EHTALHSRPDMLFIERKTLLSLK*ESATSC
Trigger: ACAAGACGTTGCGGACTCTCACTTCAGAGAGAGCAG...TGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAAGTCCTTTGGGCCTGTaGCGTGGCAGCCCCCATAGG +
Preference number: 4 (lower is better)
Translates to: PDMLFIERKTFCKDAAEESPLGL*RGSPHR
Trigger: CCTATGGGGGCTGCCACGTCACAGGCCCAAAGGACT...TTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGAGTCCTTTGGGCCTGTaGCGTGGCAGCCCCCATAGG +
Preference number: 4 (lower is better)
Translates to: QICSSLRERHFAKMLLKKSPLGL*RGSPHR
Trigger: CCTATGGGGGCTGCCACGTCACAGGCCCAAAGGACT...CTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp GAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACAAGGGAGTCTGTGGTGTaGGGTTCTGCTGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: EHTALHSRPDMLFIERKTRESVV*GSAEVK
Trigger: CTTTACCTCAGCAGAACCGCACACCACAGACTCCCT...TGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp GAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACACACAGACCCACAGCTTaGTCTTGTTGGACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: EHTALHSRPDMLFIERKTHRPTA*SCWTLR
Trigger: TCTCAGGGTCCAACAAGAGCAAGCTGTGGGTCTGTG...TGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATAGTGTGTTGGAGAGTTaGTCTGCTCTCTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHSVLES*SALSEV
Trigger: CACTTCAGAGAGAGCAGAGCAACTCTCCAACACACT...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp ATGAAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGTGTCCGCCTCTCTTCTaGCACTCCTGTATGATTTCA +
Preference number: 4 (lower is better)
Translates to: MKGYFRNSGRVTDPGSTQCPPLF*HSCMIS
Trigger: TGAAATCATACAGGAGTGGCAGAAGAGAGGCGGACA...CTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp ATGAAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGTCAGTGAAGTTAGTGTaGATAAACCCCGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: MKGYFRNSGRVTDPGSTQSVKLV*INPVSL
Trigger: GAGGCTCACGGGGTTTATGCACACTAACTTCACTGA...CTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612871.4
CDS-3UTR CCA 90 bp GCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGCCCATTCGAGAGGCTaGGCCTGGACTGGTCATCGT +
Preference number: 4 (lower is better)
Translates to: ALHSRPDMLFIERKTFCKAHSRG*AWTGHR
Trigger: ACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGC...TTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCGAAGACATCCAGCCGTaGCAGGGGCTGACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QILSCLEWHPKHFMKGYFEDIQP*QGLTWR
Trigger: CCTCCAGGTCAGCCCCTGCCACGGCTGGATGTCTTC...GAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp GAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTATCCACATCTTTGAATaGCACAGACTGTTCCATAGC +
Preference number: 4 (lower is better)
Translates to: EGLLIPGAHSIAQSSRYAIHIFE*HRLFHS
Trigger: GCTATGGAACAGTCTGTGCCATTCAAAGATGTGGAT...AGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGGCCACCTCGTTGGGGTaGAATCCATCCACGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QICSSLRERHFAKMLLKKATSLG*NPSTGS
Trigger: CGAGCCCGTGGATGGATTCCACCCCAACGAGGTGGC...CTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGAGCAAAGCCACCTCGTTaGGGTGGAATCCATCCACGG +
Preference number: 4 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGAKPPR*GGIHPR
Trigger: CCGTGGATGGATTCCACCCCAACGAGGTGGCTTTGC...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACTTGGAAGCTCCCAACTaGGGGATGCTGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSCLEWHPKHFMKGYFRNLEAPN*GMLELR
Trigger: CCTCAGCTCCAGCATCCCTCAGTTGGGAGCTTCCAA...GTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCAAGGAGCTATGCACCCCAAGTaGTCACCCGGCTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TPHMGFSSEFHSEKSHQGAMHPK*SPGFGS
Trigger: GCTTCCAAAGCCGGGTGATCACTTGGGGTGCATAGC...TCCTTGATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR TCA 90 bp GAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACAGGCCAAAACCGGGAGTaGACAAATGTCAGAACCACT +
Preference number: 4 (lower is better)
Translates to: EHTALHSRPDMLFIERKTGQNRE*TNVRTT
Trigger: AGTGGTTCTGACATTTGTTCACTCCCGGTTTTGGCC...TGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATCTGAATCCACATCTTTaGATGGCACAGACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHLNPHL*MAQTVP
Trigger: TGGAACAGTCTGTGCCATTCAAAGATGTGGATTCAG...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAACCTTTTTCCAGAAATaGTCCGCCAACAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: PGSTQHCTVVQICSSLRETFFQK*SANNSK
Trigger: TTTGCTGTTGTTGGCGGATCATTTCTGGAAAAAGGT...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCACCCAAAGCACTTTATaGAAGGTTATTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVTQSTL*KVISGT
Trigger: TGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGT...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGATTACAGTTTGAATCCTaGTGGACATCCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: DPGSTQHCTVVQICSSLRLQFES*WTSQLF
Trigger: GAACAACTGGGATGTCCATCAGGATTCAAACTGTAA...TCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp AGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCTGCATCTCCGAGCTATaGACCCCAAGTGATCACCCG +
Preference number: 4 (lower is better)
Translates to: STHHIWAFLLNFTQRNPICISEL*TPSDHP
Trigger: CGGGTGATCACTTGGGGTGCATAGCTCGGAGATGCA...GATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR GCA 90 bp GATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGATCGACACCCCAAATaGCATTACAGTTTGAATCCT +
Preference number: 4 (lower is better)
Translates to: DPGSTQHCTVVQICSSLRDRHPK*HYSLNP
Trigger: AGGATTCAAACTGTAATGGCATTTGGGGTGTCGATC...TCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATGAGTTCAAAGACATCTaGGACGCTGTGATCCATTCA +
Preference number: 4 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHEFKDI*DAVIHS
Trigger: TGAATGGATCACAGCGTCGCAGATGTCTTTGAACTC...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp AGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCGTGATCACCCGGCTTTaGAAGCTCCCAACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: STHHIWAFLLNFTQRNPIVITRL*KLPTEG
Trigger: TCCCTCAGTTGGGAGCTTCCAAAGCCGGGTGATCAC...GATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CCA 90 bp ACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCAAGGACTGGTCATCGTTGGCTaGAGAGGCCGAGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: TPHMGFSSEFHSEKSHQGLVIVG*RGRGLK
Trigger: CTTCAGTCCTCGGCCTCTCCAGCCAACGATGACCAG...TCCTTGATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CCA 90 bp ACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCAAGTGGACTGGTCATCGTTaGCTGGAGAGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: THHIWAFLLNFTQRNPIKWTGHR*LERPRT
Trigger: AGTCCTCGGCCTCTCCAGCCAACGATGACCAGTCCA...CTTGATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CCA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTGGACTGGTCATCGTTaGCTGGAGAGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYWTGHR*LERPRT
Trigger: AGTCCTCGGCCTCTCCAGCCAACGATGACCAGTCCA...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGAACCCAAGTTGCACAGTaGCACAACTTCCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGTQVAQ*HNFRAP
Trigger: GGGAGCACGGAAGTTGTGCCACTGTGCAACTTGGGT...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp ATGAAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGATTTCCATGTCTCCTTaGGAAGAGGGTAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: MKGYFRNSGRVTDPGSTQISMSP*EEGRDD
Trigger: GTCATCTCTACCCTCTTCCCAAGGAGACATGGAAAT...CTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGAGTAGCACCAGAGAGTTaGGGCCAGTCAAGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGVAPES*GQSSSL
Trigger: CAACGAGCTTGACTGGCCCCAACTCTCTGGTGCTAC...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATAGGAGTGGTCATGGCTaGGACTGGGTCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYRSGHG*DWVTLP
Trigger: GGGAAGAGTGACCCAGTCCCAGCCATGACCACTCCT...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp ATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGAGTGAAGACATCCAGCCGTaGCAGGGGCTGACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ICSSLRERHFAKMLLKKSEDIQP*QGLTWR
Trigger: CCTCCAGGTCAGCCCCTGCCACGGCTGGATGTCTTC...ACTCTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCAAGGACTCGGTGTGCGGTTCTGCTaGGGTAAAGACTGCAGGATA +
Preference number: 4 (lower is better)
Translates to: PHMGFSSEFHSEKSHQGLGVRFC*GKDCRI
Trigger: TATCCTGCAGTCTTTACCTCAGCAGAACCGCACACC...GAGTCCTTGATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR TCA 90 bp CAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCTTGGAAGCTCCCAACTaGGGGATGCTGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QILSCLEWHPKHFMKGYFLEAPN*GMLELR
Trigger: CCTCAGCTCCAGCATCCCTCAGTTGGGAGCTTCCAA...GAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGGAGAGGCCGAGGACTaGAGAGACAGGAGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: ALHSRPDMLFIERKTFCKGEAED*RDRSKN
Trigger: ATTCTTGCTCCTGTCTCTTCAGTCCTCGGCCTCTCC...TTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp CAGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCACAGACCCACAGCTTaGTCTTGTTGGACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: QHTPHMGFSSEFHSEKSHHRPTA*SCWTLR
Trigger: TCTCAGGGTCCAACAAGAGCAAGCTGTGGGTCTGTG...ATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR GCA 90 bp CTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACTGCATCTCCGAGCTATaGACCCCAAGTGATCACCCG +
Preference number: 4 (lower is better)
Translates to: LSCLEWHPKHFMKGYFRNCISEL*TPSDHP
Trigger: CGGGTGATCACTTGGGGTGCATAGCTCGGAGATGCA...GTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp CACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCAAGGACATTTTCCAGGGGGACTaGATCTCCGAGCTATGCACC +
Preference number: 4 (lower is better)
Translates to: HHIWAFLLNFTQRNPIKDIFQGD*ISELCT
Trigger: GGTGCATAGCTCGGAGATGCAGTCCCCCTGGAAAAT...GTCCTTGATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR GCA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGATTTTCTACACAGGTGTaGCCATTCGAGAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGFSTQV*PFERLG
Trigger: GCCCAGCCTCTCGAATGGGCACACCTGTGTAGAAAA...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612871.4
CDS-3UTR GCA 90 bp ATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGAGTTGTGCTCCCCAGGGGTaGATGCTCCTGAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: ICSSLRERHFAKMLLKKSCAPQG*MLLRGS
Trigger: TGAGCCTCTCAGGAGCATGCACCCCTGGGGAGCACA...ACTCTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAACAGTCGTCCAGATATaGTCTTCATTGAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PGSTQHCTVVQICSSLRETVVQI*SSLRER
Trigger: TCTTTCTCTCAATGAAGAGCATATCTGGACGACTGT...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCAACCACACACAAAGAGCTaGAGGGAGTCTGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: HTPHMGFSSEFHSEKSHQPHTKS*RESVVC
Trigger: GCACACCACAGACTCCCTCCAGCTCTTTGTGTGTGG...TTGATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CCA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATCCACACACAAAGAGCTaGAGGGAGTCTGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYPHTKS*RESVVC
Trigger: GCACACCACAGACTCCCTCCAGCTCTTTGTGTGTGG...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CAGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATACAGCTTGCTCTTGTTaGACCCTGAGAGAGCCACAC +
Preference number: 4 (lower is better)
Translates to: QHTPHMGFSSEFHSEKSHTACSC*TLREPH
Trigger: GTGTGGCTCTCTCAGGGTCCAACAAGAGCAAGCTGT...ATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CCA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATGTGATCACCCGGCTTTaGAAGCTCCCAACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYVITRL*KLPTEG
Trigger: TCCCTCAGTTGGGAGCTTCCAAAGCCGGGTGATCAC...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp GCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGTGATCACCCGGCTTTaGAAGCTCCCAACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ALHSRPDMLFIERKTFCKVITRL*KLPTEG
Trigger: TCCCTCAGTTGGGAGCTTCCAAAGCCGGGTGATCAC...TTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGGGTCATGGCTGGGACTaGGTCACTCTTCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: QICSSLRERHFAKMLLKKGHGWD*VTLPTA
Trigger: TGCAGTGGGAAGAGTGACCCAGTCCCAGCCATGACC...CTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTCCGCAACGTCTTGTTaGAAGACATCCAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYSATSC*KTSSRG
Trigger: GCCACGGCTGGATGTCTTCCAACAAGACGTTGCGGA...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGAAGGATTTGGGGCCACTaGAGCTGCACCTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGRIWGH*SCTFFQ
Trigger: CTGGAAAAAGGTGCAGCTCCAGTGGCCCCAAATCCT...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGGGTGTGCGGTTCTGCTaGGGTAAAGACTGCAGGATA +
Preference number: 4 (lower is better)
Translates to: LLFGMAPKALYERLFQEQGVRFC*GKDCRI
Trigger: TATCCTGCAGTCTTTACCTCAGCAGAACCGCACACC...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCAAGGCTCTTGTTGGACCCTaGGAGAGCCACACACAAAGA +
Preference number: 4 (lower is better)
Translates to: THHIWAFLLNFTQRNPIKALVGP*ESHTQR
Trigger: TCTTTGTGTGTGGCTCTCTCAGGGTCCAACAAGAGC...CTTGATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR TCA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGATCTACCTGGGTACACTaGCTCGTCGCTGTCATTACA +
Preference number: 4 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGSTWVH*LVAVIT
Trigger: TGTAATGACAGCGACGAGTCAGTGTACCCAGGTAGA...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp CACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCAAAGGGAGTCTGTGGTGTaGGGTTCTGCTGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: HTPHMGFSSEFHSEKSHQRESVV*GSAEVK
Trigger: CTTTACCTCAGCAGAACCGCACACCACAGACTCCCT...TTGATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR GCA 90 bp GAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACAAAAGAAAACCCAAGTTaGACAGTGGCACAACTTCCG +
Preference number: 4 (lower is better)
Translates to: EHTALHSRPDMLFIERKTKENPS*TVAQLP
Trigger: CGGAAGTTGTGCCACTGTGCAACTTGGGTTTTCTTT...TGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATGCTCAGTGCCCGCCTTaGTCTCCAAACACCTGTTTA +
Preference number: 4 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYAQCPP*SPNTCL
Trigger: TAAACAGGTGTTTGGAGACCAAGGCGGGCACTGAGC...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTGCAAAGCCACCTCGTTaGGGTGGAATCCATCCACGG +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFAKPPR*GGIHPR
Trigger: CCGTGGATGGATTCCACCCCAACGAGGTGGCTTTGC...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATATCCAAACTTGTCAATaGCTAAATAGCAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHIQTCQ*LNSRWF
Trigger: AAACCACCTGCTATTTAGTCATTGACAAGTTTGGAT...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAATTGCTCTGCTCTCTCTaGAGTGAGAGTCCGCAACGT +
Preference number: 4 (lower is better)
Translates to: PDMLFIERKTFCKDAAEELLCSL*SESPQR
Trigger: ACGTTGCGGACTCTCACTTCAGAGAGAGCAGAGCAA...TTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTGCAAAGATGCTGCTaGAGAAGAGTCCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYLQRCC*RRVLWA
Trigger: GGCCCAAAGGACTCTTCTTCAGCAGCATCTTTGCAA...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAACATCTGCGACGCTGTaGTCCATTCAGGAGAGATGT +
Preference number: 4 (lower is better)
Translates to: ALHSRPDMLFIERKTFCKTSATL*SIQERC
Trigger: ACATCTCTCCTGAATGGATCACAGCGTCGCAGATGT...TTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGACATCTGCGACGCTGTaGTCCATTCAGGAGAGATGT +
Preference number: 4 (lower is better)
Translates to: LLFGMAPKALYERLFQEQTSATL*SIQERC
Trigger: ACATCTCTCCTGAATGGATCACAGCGTCGCAGATGT...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTTGCATCTCCGAGCTATaGACCCCAAGTGATCACCCG +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFCISEL*TPSDHP
Trigger: CGGGTGATCACTTGGGGTGCATAGCTCGGAGATGCA...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp CAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCATTTTCCAGGGGGACTaGATCTCCGAGCTATGCACC +
Preference number: 4 (lower is better)
Translates to: QILSCLEWHPKHFMKGYFIFQGD*ISELCT
Trigger: GGTGCATAGCTCGGAGATGCAGTCCCCCTGGAAAAT...GAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp CAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGGGGAGCACACAGCATTaGACAGTCGTCCAGATATGC +
Preference number: 4 (lower is better)
Translates to: QICSSLRERHFAKMLLKKGSTQH*TVVQIC
Trigger: GCATATCTGGACGACTGTGCAATGCTGTGTGCTCCC...CTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGAGTTTCTCAGGAGTaGTCATGGCTGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: QILSCLEWHPKHFMKGYFRVSQE*SWLGLG
Trigger: ACCCAGTCCCAGCCATGACCACTCCTGAGAAACTCT...GAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGAACTTCCGTGCTCCCTaGCTCAGTGAAGTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLFGMAPKALYERLFQEQNFRAP*LSEVSV
Trigger: CACACTAACTTCACTGAGCCAGGGAGCACGGAAGTT...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612871.4
CDS-3UTR TCA 90 bp CACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCAAGGACGGCTGCAGAATCAATTaGTCTCTCTCTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HHIWAFLLNFTQRNPIKDGCRIN*SLSPSL
Trigger: AAGAGAAGGAGAGAGAGATCAATTGATTCTGCAGCC...GTCCTTGATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR TCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCTGCTCTCTCTGAAGTaGGAGTCCGCAACGTCTTGT +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFLLSLK*ESATSC
Trigger: ACAAGACGTTGCGGACTCTCACTTCAGAGAGAGCAG...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GGCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTAGAATCGGGGACTTCTTaGCAATTTGTCTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GTDTLLFGMAPKALYERLESGTS*QFVLPS
Trigger: AGAAGGCAAGACAAATTGTCAAGAAGTCCCCGATTC...TAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGACTGAATCCACATCTTTaGATGGCACAGACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGLNPHL*MAQTVP
Trigger: TGGAACAGTCTGTGCCATTCAAAGATGTGGATTCAG...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACATAGGGTTTGTGGAATaGGTTTACCCAAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSCLEWHPKHFMKGYFRNIGFVE*VYPSLC
Trigger: GCAGAGGCTTGGGTAAACTCATTCCACAAACCCTAT...GTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGAGTAGTCTCCCAGCAAAATaGTTCCCCTGGGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: ICSSLRERHFAKMLLKKSSLPAK*FPWAVN
Trigger: GTTCACAGCCCAGGGGAATCATTTTGCTGGGAGACT...ACTCTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTATTTTCCAGGGGGACTaGATCTCCGAGCTATGCACC +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFIFQGD*ISELCT
Trigger: GGTGCATAGCTCGGAGATGCAGTCCCCCTGGAAAAT...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATATCAGCATTCATATCTaGGCTAAGCAGTTTTATGAT +
Preference number: 4 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHISIHI*AKQFYD
Trigger: ATCATAAAACTGCTTAGCGCAGATATGAATGCTGAT...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp GGCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTAAGGTGGGAATTTAGATaGTTCAGAGTCTGCATGACG +
Preference number: 4 (lower is better)
Translates to: GTDTLLFGMAPKALYERLRWEFR*FRVCMT
Trigger: CGTCATGCAGACTCTGAAGCATCTAAATTCCCACCT...TAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp GCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAAGTGTGTTGGAGAGTTaGTCTGCTCTCTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: ALHSRPDMLFIERKTFCKSVLES*SALSEV
Trigger: CACTTCAGAGAGAGCAGAGCAACTCTCCAACACACT...TTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTGGGAGCACACAGCATTaGACAGTCGTCCAGATATGC +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFGSTQH*TVVQIC
Trigger: GCATATCTGGACGACTGTGCAATGCTGTGTGCTCCC...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp ATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGAGTTTTCAGGCAGGTAGCTaGACAGTCTCTCCATCGAGG +
Preference number: 4 (lower is better)
Translates to: ICSSLRERHFAKMLLKKSFQAGS*TVSPSR
Trigger: CCTCGATGGAGAGACTGTGCAGCTACCTGCCTGAAA...ACTCTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617537.5
CDS-3UTR CCA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGAATTTCCATGTCTCCTTaGGAAGAGGGTAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGISMSP*EEGRDD
Trigger: GTCATCTCTACCCTCTTCCCAAGGAGACATGGAAAT...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACCTGCCATTGGGCAGGTaGGAATTTAGATGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSCLEWHPKHFMKGYFRNLPLGR*EFRCFR
Trigger: TCTGAAGCATCTAAATTCCCACCTGCCCAATGGCAG...GTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACCCATACAAAATAACATaGCTGCCATTGGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSCLEWHPKHFMKGYFRNPYKIT*LPLGRW
Trigger: CCACCTGCCCAATGGCAGCCATGTTATTTTGTATGG...GTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATCCATACAAAATAACATaGCTGCCATTGGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYPYKIT*LPLGRW
Trigger: CCACCTGCCCAATGGCAGCCATGTTATTTTGTATGG...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGTTTTCTGGCAGATCTTaGCCAAAACCGGGAGTGAAC +
Preference number: 4 (lower is better)
Translates to: LLFGMAPKALYERLFQEQFSGRS*PKPGVN
Trigger: GTTCACTCCCGGTTTTGGCCAAGATCTGCCAGAAAA...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGGCTTCAGAGTCTGCATaGCGTTGGAGTAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QICSSLRERHFAKMLLKKASESA*RWSRVS
Trigger: AGAAACTCTACTCCAACGTCATGCAGACTCTGAAGC...CTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTTTGCAAAGATGCTGCTaGAGAAGAGTCCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFLQRCC*RRVLWA
Trigger: GGCCCAAAGGACTCTTCTTCAGCAGCATCTTTGCAA...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTTCTACCTGGGTACACTaGCTCGTCGCTGTCATTACA +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFSTWVH*LVAVIT
Trigger: TGTAATGACAGCGACGAGTCAGTGTACCCAGGTAGA...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp CTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAAAGAAAACCCAAGTTaGACAGTGGCACAACTTCCG +
Preference number: 4 (lower is better)
Translates to: LSCLEWHPKHFMKGYFRNKENPS*TVAQLP
Trigger: CGGAAGTTGTGCCACTGTGCAACTTGGGTTTTCTTT...GTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGAGGTGGGAATTTAGATaGTTCAGAGTCTGCATGACG +
Preference number: 4 (lower is better)
Translates to: LLFGMAPKALYERLFQEQRWEFR*FRVCMT
Trigger: CGTCATGCAGACTCTGAAGCATCTAAATTCCCACCT...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp CCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAATGTCCGCCTCTCTTCTaGCACTCCTGTATGATTTCA +
Preference number: 4 (lower is better)
Translates to: PDMLFIERKTFCKDAAEECPPLF*HSCMIS
Trigger: TGAAATCATACAGGAGTGGCAGAAGAGAGGCGGACA...TTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp GGCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTAGATCGACACCCCAAATaGCATTACAGTTTGAATCCT +
Preference number: 4 (lower is better)
Translates to: GTDTLLFGMAPKALYERLDRHPK*HYSLNP
Trigger: AGGATTCAAACTGTAATGGCATTTGGGGTGTCGATC...TAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAACACCTGTTTAATCTaGGGGTTGAACGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: LSCLEWHPKHFMKGYFRNNTCLI*GLNGFS
Trigger: GGAGAATCCGTTCAACCCCCAGATTAAACAGGTGTT...GTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGAACACCTGTTTAATCTaGGGGTTGAACGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: LLFGMAPKALYERLFQEQNTCLI*GLNGFS
Trigger: GGAGAATCCGTTCAACCCCCAGATTAAACAGGTGTT...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGATAGCCCCGCAGTGTTaGGAAAACGCTGTATTTGTC +
Preference number: 4 (lower is better)
Translates to: QICSSLRERHFAKMLLKKIAPQC*ENAVFV
Trigger: GACAAATACAGCGTTTTCCCAACACTGCGGGGCTAT...CTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGCTGGCCGAGAGGATaGTATCTGTTGTGCAAATTA +
Preference number: 4 (lower is better)
Translates to: QILSCLEWHPKHFMKGYFSWPRG*YLLCKL
Trigger: TAATTTGCACAACAGATATCATCCTCTCGGCCAGCT...GAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGGAATCGGGGACTTCTTaGCAATTTGTCTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QICSSLRERHFAKMLLKKESGTS*QFVLPS
Trigger: AGAAGGCAAGACAAATTGTCAAGAAGTCCCCGATTC...CTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTATAGGGTTTGTGGAATaGGTTTACCCAAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFIGFVE*VYPSLC
Trigger: GCAGAGGCTTGGGTAAACTCATTCCACAAACCCTAT...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTATAGCCCCGCAGTGTTaGGAAAACGCTGTATTTGTC +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFIAPQC*ENAVFV
Trigger: GACAAATACAGCGTTTTCCCAACACTGCGGGGCTAT...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGATACTCTCTTGTTTaGAATGGCACCCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: LSCLEWHPKHFMKGYFRNRYSLV*NGTQST
Trigger: AGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCT...GTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGAGTCAAAACTCCAGAGTGTaGCATACCACATCAGCATTC +
Preference number: 4 (lower is better)
Translates to: ICSSLRERHFAKMLLKKSQNSRV*HTTSAF
Trigger: GAATGCTGATGTGGTATGTCACACTCTGGAGTTTTG...ACTCTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp GGCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTAACCCAAAGCACTTTATaGAAGGTTATTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: GTDTLLFGMAPKALYERLTQSTL*KVISGT
Trigger: TGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGT...TAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTGAGTTCAAAGACATCTaGGACGCTGTGATCCATTCA +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFEFKDI*DAVIHS
Trigger: TGAATGGATCACAGCGTCGCAGATGTCTTTGAACTC...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCATCCACATCTTTGAATaGCACAGACTGTTCCATAGC +
Preference number: 4 (lower is better)
Translates to: QILSCLEWHPKHFMKGYFIHIFE*HRLFHS
Trigger: GCTATGGAACAGTCTGTGCCATTCAAAGATGTGGAT...GAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAACTCTCTTGTTTGGAATaGCACCCAAAGCACTTTATG +
Preference number: 4 (lower is better)
Translates to: PDMLFIERKTFCKDAAEELSCLE*HPKHFM
Trigger: CATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG...TTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CCA 90 bp CAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGCTCTCTTGTTTGGAATaGCACCCAAAGCACTTTATG +
Preference number: 4 (lower is better)
Translates to: QICSSLRERHFAKMLLKKLSCLE*HPKHFM
Trigger: CATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG...CTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
3UTR CAA 72 bp TTAGAACAATTAGCTGTAAAGGGCACAGATACTCTCTaGTTTGGAATGGCACCCAAAGCACTTTATGAAAGG +
Preference number: 4 (lower is better)
Translates to: LEQLAVKGTDTL*FGMAPKALYER
Trigger: CCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGCCCTTTACAGCTAATTGTTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGAGTACCTTTTTCCAGAAATaGTCCGCCAACAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: ICSSLRERHFAKMLLKKSTFFQK*SANNSK
Trigger: TTTGCTGTTGTTGGCGGATCATTTCTGGAAAAAGGT...ACTCTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTTTACAGTTTGAATCCTaGTGGACATCCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFLQFES*WTSQLF
Trigger: GAACAACTGGGATGTCCATCAGGATTCAAACTGTAA...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGAGTAATGCCATTACAGTTTaGATCCTGATGGACATCCCA +
Preference number: 4 (lower is better)
Translates to: ICSSLRERHFAKMLLKKSNAITV*ILMDIP
Trigger: TGGGATGTCCATCAGGATTCAAACTGTAATGGCATT...ACTCTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTAATGCCATTACAGTTTaGATCCTGATGGACATCCCA +
Preference number: 4 (lower is better)
Translates to: TDTLLFGMAPKALYERLFNAITV*ILMDIP
Trigger: TGGGATGTCCATCAGGATTCAAACTGTAATGGCATT...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGAATCAGCATTCATATCTaGGCTAAGCAGTTTTATGAT +
Preference number: 4 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGISIHI*AKQFYD
Trigger: ATCATAAAACTGCTTAGCGCAGATATGAATGCTGAT...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR GCA 90 bp CAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGACAGTCGTCCAGATATaGTCTTCATTGAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: QICSSLRERHFAKMLLKKTVVQI*SSLRER
Trigger: TCTTTCTCTCAATGAAGAGCATATCTGGACGACTGT...CTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR TCA 90 bp CAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCATCCAAACTTGTCAATaGCTAAATAGCAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: QILSCLEWHPKHFMKGYFIQTCQ*LNSRWF
Trigger: AAACCACCTGCTATTTAGTCATTGACAAGTTTGGAT...GAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS CCA 90 bp CAGCACTGCTGGCTACACAGGTGTGCCCATTCGAGAGGCTGGGCCTaGACTGGTCATCGTTGGCTGGAGAGGCCGAGGACTGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: QHCWLHRCAHSRGWA*TGHRWLERPRTEET
Trigger: TGTCTCTTCAGTCCTCGGCCTCTCCAGCCAACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGCACACCTGTGTAGCCAGCAGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS CCA 90 bp CCAGCACACACCCTACACAGGTGTGCCCATTCGAGAGGCTGGGCCTaGACTGGTCATCGTTGGCTGGAGAGGCCGAGGACTGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: PAHTLHRCAHSRGWA*TGHRWLERPRTEET
Trigger: TGTCTCTTCAGTCCTCGGCCTCTCCAGCCAACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGCACACCTGTGTAGGGTGTGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617267.4
ENST00000617537.5
CDS CCA 90 bp CACAGGTGTGCCCATTCGAGAGGCTGGGCCTGGACTGGTCATCGTTaGCTGGAGAGGCCGAGGACTGAAGAGACAGGAGCAAGAATAGAG +
Preference number: 5 (lower is better)
Translates to: HRCAHSRGWAWTGHR*LERPRTEETGARIE
Trigger: CTCTATTCTTGCTCCTGTCTCTTCAGTCCTCGGCCTCTCCAGCCAACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGCACACCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414637.1
ENST00000435386.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS GCA 90 bp AAAGCCACCTCGTTGGGGTGGAATCCATCCACGGGCTCGATGAGCTaGCAGGGCTGTCCGCCTCTCTTCTGCCACTCCTGTATGATTTCA +
Preference number: 5 (lower is better)
Translates to: KATSLGWNPSTGSMS*QGCPPLFCHSCMIS
Trigger: TGAAATCATACAGGAGTGGCAGAAGAGAGGCGGACAGCCCTGGCAGCTCATCGAGCCCGTGGATGGATTCCACCCCAACGAGGTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000614254.1
ENST00000617537.5
CDS-3UTR CAA 90 bp AACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGACCCACAGCTTGCTCTaGTTGGACCCTGAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: NSGRVTDPGSTQHCTVVQTHSLL*LDPERA
Trigger: GGCTCTCTCAGGGTCCAACAAGAGCAAGCTGTGGGT...CTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS GCA 90 bp CTCTTTCTCTCGTTGGGGTGGAATCCATCCACGGGCTCGATGAGCTaGCAGGGCTGTCCGCCTCTCTTCTGCCACTCCTGTATGATTTCA +
Preference number: 5 (lower is better)
Translates to: LFLSLGWNPSTGSMS*QGCPPLFCHSCMIS
Trigger: TGAAATCATACAGGAGTGGCAGAAGAGAGGCGGACAGCCCTGGCAGCTCATCGAGCCCGTGGATGGATTCCACCCCAACGAGAGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617267.4
CDS-3UTR CAA 90 bp TCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGCACAGCTTGCTCTTGTaGGACCCTGAGAGAGCCACA +
Preference number: 5 (lower is better)
Translates to: SGTAEGLLIPGAHSIAQSHSLLL*DPERAT
Trigger: TGTGGCTCTCTCAGGGTCCAACAAGAGCAAGCTGTG...CGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp TCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGGGCCAGTCAAGCTCGTaGGTAAGGGCTGTTGGTAGA +
Preference number: 5 (lower is better)
Translates to: SGTAEGLLIPGAHSIAQSGQSSS*VRAVGR
Trigger: TCTACCAACAGCCCTTACCAACGAGCTTGACTGGCC...CGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp TCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGAGAGTCCGCAACGTCTaGTTGGAAGACATCCAGCCG +
Preference number: 5 (lower is better)
Translates to: SGTAEGLLIPGAHSIAQSRVRNV*LEDIQP
Trigger: CGGCTGGATGTCTTCCAACAAGACGTTGCGGACTCT...CGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGGCTCAGTGCCCGCCTaGGTCTCCAAACACCTGTTT +
Preference number: 5 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVGSVPA*VSKHLF
Trigger: AAACAGGTGTTTGGAGACCAAGGCGGGCACTGAGCC...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCAGCAAAGCCACCTCGTaGGGGTGGAATCCATCCACG +
Preference number: 5 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVSKATS*GWNPST
Trigger: CGTGGATGGATTCCACCCCAACGAGGTGGCTTTGCT...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS CCA 90 bp AGAACAGTTTTTCTACACAGGTGTGCCCATTCGAGAGGCTGGGCCTaGACTGGTCATCGTTGGCTGGAGAGGCCGAGGACTGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: RTVFLHRCAHSRGWA*TGHRWLERPRTEET
Trigger: TGTCTCTTCAGTCCTCGGCCTCTCCAGCCAACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGCACACCTGTGTAGAAAAACTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435386.1
ENST00000612871.4
CDS-3UTR CAA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCCGGGAGCACACAGCATaGCACAGTCGTCCAGATATG +
Preference number: 5 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVREHTA*HSRPDM
Trigger: CATATCTGGACGACTGTGCAATGCTGTGTGCTCCCG...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS CCA 90 bp ACAGCTTGCTCTTGTTGGACCCTGAGAGAGCCACACACAAAGAGCTaGAGGGAGTCTGTGGTGTGCGGTTCTGCTGAGGTAAAGACTGCA +
Preference number: 5 (lower is better)
Translates to: TACSCWTLREPHTKS*RESVVCGSAEVKTA
Trigger: TGCAGTCTTTACCTCAGCAGAACCGCACACCACAGACTCCCTCCAGCTCTTTGTGTGTGGCTCTCTCAGGGTCCAACAAGAGCAAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414637.1
ENST00000435386.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAGGCTCAGTGCCCGCCTaGGTCTCCAAACACCTGTTT +
Preference number: 5 (lower is better)
Translates to: PGSTQHCTVVQICSSLREGSVPA*VSKHLF
Trigger: AAACAGGTGTTTGGAGACCAAGGCGGGCACTGAGCC...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS TCA 90 bp TTTCCCAGGATTTGGGGCCACTGGAGCTGCACCTTTTTCCAGAAATaGTCCGCCAACAACAGCAAAGCCACTCTCTGGTTCTGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: FPRIWGHWSCTFFQK*SANNSKATLWFCCR
Trigger: GCGACAGCAGAACCAGAGAGTGGCTTTGCTGTTGTTGGCGGATCATTTCTGGAAAAAGGTGCAGCTCCAGTGGCCCCAAATCCTGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617267.4
ENST00000621510.1
CDS-3UTR CAA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGAGTCCGCAACGTCTaGTTGGAAGACATCCAGCCG +
Preference number: 5 (lower is better)
Translates to: PGSTQHCTVVQICSSLRERVRNV*LEDIQP
Trigger: CGGCTGGATGTCTTCCAACAAGACGTTGCGGACTCT...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAACGGGAGCACACAGCATaGCACAGTCGTCCAGATATG +
Preference number: 5 (lower is better)
Translates to: PGSTQHCTVVQICSSLREREHTA*HSRPDM
Trigger: CATATCTGGACGACTGTGCAATGCTGTGTGCTCCCG...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS TCA 90 bp GCCACACACAAAGAGCTGGAGGGAGTCTGTGGTGTGCGGTTCTGCTaGGGTAAAGACTGCAGGATAAAGAAAACCCAAGTTGCACAGTGG +
Preference number: 5 (lower is better)
Translates to: ATHKELEGVCGVRFC*GKDCRIKKTQVAQW
Trigger: CCACTGTGCAACTTGGGTTTTCTTTATCCTGCAGTCTTTACCTCAGCAGAACCGCACACCACAGACTCCCTCCAGCTCTTTGTGTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414637.1
ENST00000435386.1
ENST00000612871.4
ENST00000617537.5
CDS CCA 90 bp ATAAAGAAAACCCAAGTTGCACAGTGGCACAACTTCCGTGCTCCCTaGCTCAGTGAAGTTAGTGTGCATAAACCCCGTGAGCCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: IKKTQVAQWHNFRAP*LSEVSVHKPREPRG
Trigger: GCCTCGAGGCTCACGGGGTTTATGCACACTAACTTCACTGAGCCAGGGAGCACGGAAGTTGTGCCACTGTGCAACTTGGGTTTTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612871.4
CDS-3UTR CAA 90 bp TCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCTGAATCCACATCTTaGAATGGCACAGACTGTTCC +
Preference number: 5 (lower is better)
Translates to: SGTAEGLLIPGAHSIAQSSESTS*NGTDCS
Trigger: GGAACAGTCTGTGCCATTCAAAGATGTGGATTCAGA...CGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp TTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCTGTTTAATCTGGGGGTaGAACGGATTCTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: FRNSGRVTDPGSTQHCTVCLIWG*NGFSFP
Trigger: GGGAAAGGAGAATCCGTTCAACCCCCAGATTAAACA...GACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp GAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACACACAGCTTGCTCTTGTaGGACCCTGAGAGAGCCACA +
Preference number: 5 (lower is better)
Translates to: EHTALHSRPDMLFIERKTHSLLL*DPERAT
Trigger: TGTGGCTCTCTCAGGGTCCAACAAGAGCAAGCTGTG...TGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp GATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAATGGAACTCCATCTTTaGGATCGACACCCCAAATGC +
Preference number: 5 (lower is better)
Translates to: DPGSTQHCTVVQICSSLRMELHL*DRHPKC
Trigger: GCATTTGGGGTGTCGATCCAAAAGATGGAGTTCCAT...TCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS TCA 90 bp CCATCTTTTGGATCGACACCCCAAATGCCATTACAGTTTGAATCCTaGTGGACATCCCAGTTGTTCGGCCTTCTACCTGGGTACACTGAC +
Preference number: 5 (lower is better)
Translates to: PSFGSTPQMPLQFES*WTSQLFGLLPGYTD
Trigger: GTCAGTGTACCCAGGTAGAAGGCCGAACAACTGGGATGTCCATCAGGATTCAAACTGTAATGGCATTTGGGGTGTCGATCCAAAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CCA 90 bp TTAATTCCAACAGTGGAGTCCAGAAATCCTGTAGCACCAGAGAGTTaGGGCCAGTCAAGCTCGTTGGTAAGGGCTGTTGGTAGATTGATG +
Preference number: 5 (lower is better)
Translates to: LIPTVESRNPVAPES*GQSSSLVRAVGRLM
Trigger: CATCAATCTACCAACAGCCCTTACCAACGAGCTTGACTGGCCCCAACTCTCTGGTGCTACAGGATTTCTGGACTCCACTGTTGGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480201.1
ENST00000487014.5
ENST00000495942.5
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CAGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATACCCACAGCTTGCTCTaGTTGGACCCTGAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: QHTPHMGFSSEFHSEKSHTHSLL*LDPERA
Trigger: GGCTCTCTCAGGGTCCAACAAGAGCAAGCTGTGGGT...ATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CAA 90 bp ACCAGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCTCACAGACCCACAGCTaGCTCTTGTTGGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: TSTHHIWAFLLNFTQRNPSQTHS*LLLDPE
Trigger: CTCAGGGTCCAACAAGAGCAAGCTGTGGGTCTGTGA...GGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CAA 90 bp CCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGAATCGGGGACTTCTaGACAATTTGTCTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: PGSTQHCTVVQICSSLRERIGDF*TICLAF
Trigger: GAAGGCAAGACAAATTGTCAAGAAGTCCCCGATTCT...TTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp GAAGGGTTACTGATCCCGGGAGCACACAGCATTGCACAGTCGTCCAGATATGCTAAGATGCACCATTTCTaGAAATATTCTGGTAGTCCC +
Preference number: 5 (lower is better)
Translates to: EGLLIPGAHSIAQSSRYAKMHHF*KYSGSP
Trigger: GGGACTACCAGAATATTTCAAGAAATGGTGCATCTT...AGCATATCTGGACGACTGTGCAATGCTGTGTGCTCCCGGGATCAGTAACCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp ATGAAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCGTCGAGTTGTGAACTaGAGCAAGCTGTTCTATTAC +
Preference number: 5 (lower is better)
Translates to: MKGYFRNSGRVTDPGSTQRRVVN*SKLFYY
Trigger: GTAATAGAACAGCTTGCTCAAGTTCACAACTCGACG...CTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617537.5
CDS TCA 90 bp TTTTCTTCTGAATTTCACTCAGAGAAATCCCATCAAGGACTCTTATaGCAGTTGTGGCTTCTCAGCACTGCTGGCTACACAGGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: FSSEFHSEKSHQGLL*QLWLLSTAGYTGVP
Trigger: GGGCACACCTGTGTAGCCAGCAGTGCTGAGAAGCCACAACTGTCATAAGAGTCCTTGATGGGATTTCTCTGAGTGAAATTCAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CAA 90 bp ACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATCAAGGACACAGCTTGCTCTTGTaGGACCCTGAGAGAGCCACA +
Preference number: 5 (lower is better)
Translates to: TPHMGFSSEFHSEKSHQGHSLLL*DPERAT
Trigger: TGTGGCTCTCTCAGGGTCCAACAAGAGCAAGCTGTG...TCCTTGATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CAA 90 bp GCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAATCACAGACCCACAGCTaGCTCTTGTTGGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: ALHSRPDMLFIERKTFCKSQTHS*LLLDPE
Trigger: CTCAGGGTCCAACAAGAGCAAGCTGTGGGTCTGTGA...TTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp GCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGGCCAGTCAAGCTCGTaGGTAAGGGCTGTTGGTAGA +
Preference number: 5 (lower is better)
Translates to: ALHSRPDMLFIERKTFCKGQSSS*VRAVGR
Trigger: TCTACCAACAGCCCTTACCAACGAGCTTGACTGGCC...TTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATAAATGCCATTACAGTTaGAATCCTGATGGACATCCC +
Preference number: 5 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHKCHYS*NPDGHP
Trigger: GGGATGTCCATCAGGATTCAAACTGTAATGGCATTT...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp AAAGGTTATTTCAGGAACAGCGGAAGGGTTACTGATCCCGGGAGCACACAGCATAGGGCTGTTGGTAGATaGATGAAAGAGTTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: KGYFRNSGRVTDPGSTQHRAVGR*MKEFKD
Trigger: GTCTTTGAACTCTTTCATCAATCTACCAACAGCCCT...ATGCTGTGTGCTCCCGGGATCAGTAACCCTTCCGCTGTTCCTGAAATAACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS CCA 90 bp TTATCCCAGAGAAAGGTTCCATCTGGTAAGCCATACAAAATAACATaGCTGCCATTGGGCAGGTGGGAATTTAGATGCTTCAGAGTCTGC +
Preference number: 5 (lower is better)
Translates to: LSQRKVPSGKPYKIT*LPLGRWEFRCFRVC
Trigger: GCAGACTCTGAAGCATCTAAATTCCCACCTGCCCAATGGCAGCCATGTTATTTTGTATGGCTTACCAGATGGAACCTTTCTCTGGGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480201.1
ENST00000487014.5
ENST00000491444.5
ENST00000495942.5
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CCA 90 bp CATGTCAGGTTTCCCTTTATCCATGATGTTAGCTGGGTCCATTCTTaGTTGTCCAGTGTCTGGCTTGTCATTAATATGCCTTTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: HVRFPFIHDVSWVHS*LSSVWLVINMPLRR
Trigger: CCTCCTCAAAGGCATATTAATGACAAGCCAGACACTGGACAACCAAGAATGGACCCAGCTAACATCATGGATAAAGGGAAACCTGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617267.4
ENST00000621510.1
CDS CCA 90 bp GTTCTGCTGTCGCATGTCAGGTTTCCCTTTATCCATGATGTTAGCTaGGTCCATTCTTGGTTGTCCAGTGTCTGGCTTGTCATTAATATG +
Preference number: 5 (lower is better)
Translates to: VLLSHVRFPFIHDVS*VHSWLSSVWLVINM
Trigger: CATATTAATGACAAGCCAGACACTGGACAACCAAGAATGGACCCAGCTAACATCATGGATAAAGGGAAACCTGACATGCGACAGCAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617267.4
ENST00000621510.1
CDS-3UTR CAA 90 bp GAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACAAGGCTGCAGAATCAATaGATCTCTCTCTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: EHTALHSRPDMLFIERKTRLQNQ*ISLSFS
Trigger: AGAGAAGGAGAGAGAGATCAATTGATTCTGCAGCCT...TGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp GAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATCTGAATCCACATCTTaGAATGGCACAGACTGTTCC +
Preference number: 5 (lower is better)
Translates to: EHTALHSRPDMLFIERKTSESTS*NGTDCS
Trigger: GGAACAGTCTGTGCCATTCAAAGATGTGGATTCAGA...TGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS CCA 90 bp TTTATCCATGATGTTAGCTGGGTCCATTCTTGGTTGTCCAGTGTCTaGCTTGTCATTAATATGCCTTTGAGGAGGATGCTCTTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: FIHDVSWVHSWLSSV*LVINMPLRRMLFLC
Trigger: GCAGAGAAAGAGCATCCTCCTCAAAGGCATATTAATGACAAGCCAGACACTGGACAACCAAGAATGGACCCAGCTAACATCATGGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621510.1
CDS CCA 90 bp TTTATCCATGATGTTAGCTGGGTCCATTCTTGGTTGTCCAGTGTCTaGCTTGTCATTAATATGCCTTTGAGGAGGATGCTCTTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: FIHDVSWVHSWLSSV*LVINMPLRRMLFLS
Trigger: CGAGAGAAAGAGCATCCTCCTCAAAGGCATATTAATGACAAGCCAGACACTGGACAACCAAGAATGGACCCAGCTAACATCATGGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617267.4
CDS-3UTR CAA 90 bp ACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTTCACAGACCCACAGCTaGCTCTTGTTGGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: TDTLLFGMAPKALYERLFSQTHS*LLLDPE
Trigger: CTCAGGGTCCAACAAGAGCAAGCTGTGGGTCTGTGA...AAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGAATAACATGGCTGCCATaGGGCAGGTGGGAATTTAGA +
Preference number: 5 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGITWLP*GRWEFR
Trigger: TCTAAATTCCCACCTGCCCAATGGCAGCCATGTTAT...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGGATAGCCCCGCAGTGTaGGGAAAACGCTGTATTTGT +
Preference number: 5 (lower is better)
Translates to: LLFGMAPKALYERLFQEQDSPAV*GKRCIC
Trigger: ACAAATACAGCGTTTTCCCAACACTGCGGGGCTATC...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACGATAGCCCCGCAGTGTaGGGAAAACGCTGTATTTGT +
Preference number: 5 (lower is better)
Translates to: LSCLEWHPKHFMKGYFRNDSPAV*GKRCIC
Trigger: ACAAATACAGCGTTTTCCCAACACTGCGGGGCTATC...GTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp TGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCGGAGGCACAGATACTCTCTaGTTTGGAATGGCACCCAAA +
Preference number: 5 (lower is better)
Translates to: CLEWHPKHFMKGYFRNSGGTDTL*FGMAPK
Trigger: TTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGCC...TCCGCTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS CCA 90 bp TGTAAATTTCCATGTCTCCTTGGGAAGAGGGTAGAGATGACACAATaGTTGGCCAGTGTTCTGTTTACAAAACTCCAGAGTGTGACATAC +
Preference number: 5 (lower is better)
Translates to: CKFPCLLGKRVEMTQ*LASVLFTKLQSVTY
Trigger: GTATGTCACACTCTGGAGTTTTGTAAACAGAACACTGGCCAACCATTGTGTCATCTCTACCCTCTTCCCAAGGAGACATGGAAATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435386.1
ENST00000543742.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CAGCACACACCACATATGGGCTTTTCTTCTGAATTTCACTCAGAGAAATCCCATAGGCTGCAGAATCAATaGATCTCTCTCTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: QHTPHMGFSSEFHSEKSHRLQNQ*ISLSFS
Trigger: AGAGAAGGAGAGAGAGATCAATTGATTCTGCAGCCT...ATGGGATTTCTCTGAGTGAAATTCAGAAGAAAAGCCCATATGTGGTGTGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS-3UTR CAA 90 bp GAGCACACAGCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACAAAGATGCACCATTTCTaGAAATATTCTGGTAGTCCC +
Preference number: 5 (lower is better)
Translates to: EHTALHSRPDMLFIERKTKMHHF*KYSGSP
Trigger: GGGACTACCAGAATATTTCAAGAAATGGTGCATCTT...TGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGCTGTGTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACATAACATGGCTGCCATaGGGCAGGTGGGAATTTAGA +
Preference number: 5 (lower is better)
Translates to: LSCLEWHPKHFMKGYFRNITWLP*GRWEFR
Trigger: TCTAAATTCCCACCTGCCCAATGGCAGCCATGTTAT...GTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATATTTTCTGGCAGATCTaGGCCAAAACCGGGAGTGAA +
Preference number: 5 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYIFWQI*AKTGSE
Trigger: TTCACTCCCGGTTTTGGCCAAGATCTGCCAGAAAAT...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTGTTTAATCTGGGGGTaGAACGGATTCTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYCLIWG*NGFSFP
Trigger: GGGAAAGGAGAATCCGTTCAACCCCCAGATTAAACA...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATATGGAACTCCATCTTTaGGATCGACACCCCAAATGC +
Preference number: 5 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYMELHL*DRHPKC
Trigger: GCATTTGGGGTGTCGATCCAAAAGATGGAGTTCCAT...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp GCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAACAGATACTCTCTTGTTaGGAATGGCACCCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: ALHSRPDMLFIERKTFCKQILSC*EWHPKH
Trigger: GTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG...TTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGCAGATACTCTCTTGTTaGGAATGGCACCCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: LLFGMAPKALYERLFQEQQILSC*EWHPKH
Trigger: GTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp GCACAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATAGAATCGGGGACTTCTaGACAATTTGTCTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: AQILSCLEWHPKHFMKGYRIGDF*TICLAF
Trigger: GAAGGCAAGACAAATTGTCAAGAAGTCCCCGATTCT...ATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CAGATACTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCATTTTCTGGCAGATCTaGGCCAAAACCGGGAGTGAA +
Preference number: 5 (lower is better)
Translates to: QILSCLEWHPKHFMKGYFIFWQI*AKTGSE
Trigger: TTCACTCCCGGTTTTGGCCAAGATCTGCCAGAAAAT...GAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAGTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGAGGCTGCAGAATCAATaGATCTCTCTCTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: QICSSLRERHFAKMLLKKRLQNQ*ISLSFS
Trigger: AGAGAAGGAGAGAGAGATCAATTGATTCTGCAGCCT...CTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGGGGAAAACGCTGTATTaGTCTGAATCCACATCTTTG +
Preference number: 5 (lower is better)
Translates to: LLFGMAPKALYERLFQEQGKTLY*SESTSL
Trigger: CAAAGATGTGGATTCAGACAAATACAGCGTTTTCCC...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CTCTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACGGGAAAACGCTGTATTaGTCTGAATCCACATCTTTG +
Preference number: 5 (lower is better)
Translates to: LSCLEWHPKHFMKGYFRNGKTLY*SESTSL
Trigger: CAAAGATGTGGATTCAGACAAATACAGCGTTTTCCC...GTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp GCATTGCACAGTCGTCCAGATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAAAATGCCATTACAGTTaGAATCCTGATGGACATCCC +
Preference number: 5 (lower is better)
Translates to: ALHSRPDMLFIERKTFCKKCHYS*NPDGHP
Trigger: GGGATGTCCATCAGGATTCAAACTGTAATGGCATTT...TTTGCAAAATGTCTTTCTCTCAATGAAGAGCATATCTGGACGACTGTGCAATGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp CTCTTGTTTGGAATGGCACCCAAAGCACTTTATGAAAGGTTATTTCAGGAACAGAGGGCTGTTGGTAGATaGATGAAAGAGTTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: LLFGMAPKALYERLFQEQRAVGR*MKEFKD
Trigger: GTCTTTGAACTCTTTCATCAATCTACCAACAGCCCT...CTGTTCCTGAAATAACCTTTCATAAAGTGCTTTGGGTGCCATTCCAAACAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS-3UTR CAA 90 bp ATATGCTCTTCATTGAGAGAAAGACATTTTGCAAAGATGCTGCTGAAGAAGAGTGGCACAGATACTCTCTaGTTTGGAATGGCACCCAAA +
Preference number: 5 (lower is better)
Translates to: ICSSLRERHFAKMLLKKSGTDTL*FGMAPK
Trigger: TTTGGGTGCCATTCCAAACAAGAGAGTATCTGTGCC...ACTCTTCTTCAGCAGCATCTTTGCAAAATGTCTTTCTCTCAATGAAGAGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612871.4
ENST00000617537.5
CDS TCA 72 bp CCACCTCGTTGGGGTGGAATCCATCCACGGGCTCGATaGGCTGCCAGGGCTGTCCGCCTCTCTTCTGCCACT +
Preference number: 6 (lower is better)
Translates to: PPRWGGIHPRAR*AARAVRLSSAT
Trigger: AGTGGCAGAAGAGAGGCGGACAGCCCTGGCAGCTCATCGAGCCCGTGGATGGATTCCACCCCAACGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000614254.1
ENST00000617537.5
CDS GCA 72 bp TCGTTGGGGTGGAATCCATCCACGGGCTCGATGAGCTaGCAGGGCTGTCCGCCTCTCTTCTGCCACTCCTGT +
Preference number: 6 (lower is better)
Translates to: SLGWNPSTGSMS*QGCPPLFCHSC
Trigger: ACAGGAGTGGCAGAAGAGAGGCGGACAGCCCTGGCAGCTCATCGAGCCCGTGGATGGATTCCACCCCAACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612871.4
ENST00000614254.1
ENST00000617267.4
ENST00000617537.5
CDS CCA 72 bp GCCCATTCGAGAGGCTGGGCCTGGACTGGTCATCGTTaGCTGGAGAGGCCGAGGACTGAAGAGACAGGAGCA +
Preference number: 6 (lower is better)
Translates to: AHSRGWAWTGHR*LERPRTEETGA
Trigger: TGCTCCTGTCTCTTCAGTCCTCGGCCTCTCCAGCCAACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414637.1
ENST00000435386.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CCA 72 bp TGGCTACACAGGTGTGCCCATTCGAGAGGCTGGGCCTaGACTGGTCATCGTTGGCTGGAGAGGCCGAGGACT +
Preference number: 6 (lower is better)
Translates to: WLHRCAHSRGWA*TGHRWLERPRT
Trigger: AGTCCTCGGCCTCTCCAGCCAACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGCACACCTGTGTAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414637.1
CDS CCA 72 bp ACCCTACACAGGTGTGCCCATTCGAGAGGCTGGGCCTaGACTGGTCATCGTTGGCTGGAGAGGCCGAGGACT +
Preference number: 6 (lower is better)
Translates to: TLHRCAHSRGWA*TGHRWLERPRT
Trigger: AGTCCTCGGCCTCTCCAGCCAACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGCACACCTGTGTAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617267.4
ENST00000617537.5
CDS TCA 72 bp TTCTCTCGTTGGGGTGGAATCCATCCACGGGCTCGATaGGCTGCCAGGGCTGTCCGCCTCTCTTCTGCCACT +
Preference number: 6 (lower is better)
Translates to: FSRWGGIHPRAR*AARAVRLSSAT
Trigger: AGTGGCAGAAGAGAGGCGGACAGCCCTGGCAGCTCATCGAGCCCGTGGATGGATTCCACCCCAACGAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617267.4
CDS TCA 72 bp CCAGGGGGACTGCATCTCCGAGCTATGCACCCCAAGTaGTCACCCGGCTTTGGAAGCTCCCAACTGAGGGAT +
Preference number: 6 (lower is better)
Translates to: PGGLHLRAMHPK*SPGFGSSQLRD
Trigger: ATCCCTCAGTTGGGAGCTTCCAAAGCCGGGTGATCACTTGGGGTGCATAGCTCGGAGATGCAGTCCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414637.1
ENST00000435386.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CCA 72 bp TTTCTACACAGGTGTGCCCATTCGAGAGGCTGGGCCTaGACTGGTCATCGTTGGCTGGAGAGGCCGAGGACT +
Preference number: 6 (lower is better)
Translates to: FLHRCAHSRGWA*TGHRWLERPRT
Trigger: AGTCCTCGGCCTCTCCAGCCAACGATGACCAGTCCAGGCCCAGCCTCTCGAATGGGCACACCTGTGTAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435386.1
ENST00000612871.4
CDS CAA 90 bp GCTCAGTGCCCGCCTTGGTCTCCAAACACCTGTTTAATCTGGGGGTaGAACGGATTCTCCTTTCCCAGGATTTGGGGCCACTGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: AQCPPWSPNTCLIWG*NGFSFPRIWGHWSC
Trigger: GCAGCTCCAGTGGCCCCAAATCCTGGGAAAGGAGAATCCGTTCAACCCCCAGATTAAACAGGTGTTTGGAGACCAAGGCGGGCACTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000612871.4
ENST00000614254.1
ENST00000617267.4
ENST00000617537.5
ENST00000621510.1
CDS GCA 72 bp ACAACTTCCGTGCTCCCTGGCTCAGTGAAGTTAGTGTaGATAAACCCCGTGAGCCTCGAGGCTTGCCGGAAC +
Preference number: 6 (lower is better)
Translates to: TTSVLPGSVKLV*INPVSLEACRN
Trigger: GTTCCGGCAAGCCTCGAGGCTCACGGGGTTTATGCACACTAACTTCACTGAGCCAGGGAGCACGGAAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612871.4
CDS CAA 72 bp CAGGGGTGCATGCTCCTGAGAGGCTCAGTGCCCGCCTaGGTCTCCAAACACCTGTTTAATCTGGGGGTTGAA +
Preference number: 6 (lower is better)
Translates to: QGCMLLRGSVPA*VSKHLFNLGVE
Trigger: TTCAACCCCCAGATTAAACAGGTGTTTGGAGACCAAGGCGGGCACTGAGCCTCTCAGGAGCATGCACCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000612871.4
ENST00000614254.1
ENST00000617267.4
ENST00000617537.5
ENST00000621510.1
CDS GCA 72 bp GGCTCGATGAGCTGCCAGGGCTGTCCGCCTCTCTTCTaGCACTCCTGTATGATTTCATGGAAGGCAAAATCC +
Preference number: 6 (lower is better)
Translates to: GSMSCQGCPPLF*HSCMISWKAKS
Trigger: GGATTTTGCCTTCCATGAAATCATACAGGAGTGGCAGAAGAGAGGCGGACAGCCCTGGCAGCTCATCGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612871.4
ENST00000614254.1
ENST00000617267.4
ENST00000617537.5
CDS TCA 72 bp ATTTGGGGCCACTGGAGCTGCACCTTTTTCCAGAAATaGTCCGCCAACAACAGCAAAGCCACCTCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: IWGHWSCTFFQK*SANNSKATSLG
Trigger: CCCCAACGAGGTGGCTTTGCTGTTGTTGGCGGATCATTTCTGGAAAAAGGTGCAGCTCCAGTGGCCCCAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000614254.1
ENST00000617537.5
CDS CCA 72 bp ACAGTGGAGTCCAGAAATCCTGTAGCACCAGAGAGTTaGGGCCAGTCAAGCTCGTTGGTAAGGGCTGTTGGT +
Preference number: 6 (lower is better)
Translates to: TVESRNPVAPES*GQSSSLVRAVG
Trigger: ACCAACAGCCCTTACCAACGAGCTTGACTGGCCCCAACTCTCTGGTGCTACAGGATTTCTGGACTCCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480201.1
ENST00000487014.5
ENST00000495942.5
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CCA 72 bp ACCCAAGTTGCACAGTGGCACAACTTCCGTGCTCCCTaGCTCAGTGAAGTTAGTGTGCATAAACCCCGTGAG +
Preference number: 6 (lower is better)
Translates to: TQVAQWHNFRAP*LSEVSVHKPRE
Trigger: CTCACGGGGTTTATGCACACTAACTTCACTGAGCCAGGGAGCACGGAAGTTGTGCCACTGTGCAACTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612871.4
CDS CAA 72 bp CCGCCTTGGTCTCCAAACACCTGTTTAATCTGGGGGTaGAACGGATTCTCCTTTCCCAGGATTTGGGGCCAC +
Preference number: 6 (lower is better)
Translates to: PPWSPNTCLIWG*NGFSFPRIWGH
Trigger: GTGGCCCCAAATCCTGGGAAAGGAGAATCCGTTCAACCCCCAGATTAAACAGGTGTTTGGAGACCAAGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000612871.4
ENST00000614254.1
ENST00000617267.4
ENST00000617537.5
ENST00000621510.1
CDS TCA 72 bp ATTTGGGGCCACTGGAGCTGCACCTTTTTCCAGAAATaGTCCGCCAACAACAGCAAAGCCACTCTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: IWGHWSCTFFQK*SANNSKATLWF
Trigger: GAACCAGAGAGTGGCTTTGCTGTTGTTGGCGGATCATTTCTGGAAAAAGGTGCAGCTCCAGTGGCCCCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617267.4
ENST00000621510.1
CDS TCA 72 bp GGATCGACACCCCAAATGCCATTACAGTTTGAATCCTaGTGGACATCCCAGTTGTTCGGCCTTCTACCTGGG +
Preference number: 6 (lower is better)
Translates to: GSTPQMPLQFES*WTSQLFGLLPG
Trigger: CCCAGGTAGAAGGCCGAACAACTGGGATGTCCATCAGGATTCAAACTGTAATGGCATTTGGGGTGTCGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CCA 72 bp GGAGTAGAGTTTCTCAGGAGTGGTCATGGCTGGGACTaGGTCACTCTTCCCACTGCAGACATCATTTCCAAT +
Preference number: 6 (lower is better)
Translates to: GVEFLRSGHGWD*VTLPTADIISN
Trigger: ATTGGAAATGATGTCTGCAGTGGGAAGAGTGACCCAGTCCCAGCCATGACCACTCCTGAGAAACTCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000480201.1
ENST00000487014.5
ENST00000491444.5
ENST00000495942.5
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CAA 72 bp CCTGTAGCACCAGAGAGTTGGGGCCAGTCAAGCTCGTaGGTAAGGGCTGTTGGTAGATTGATGAAAGAGTTC +
Preference number: 6 (lower is better)
Translates to: PVAPESWGQSSS*VRAVGRLMKEF
Trigger: GAACTCTTTCATCAATCTACCAACAGCCCTTACCAACGAGCTTGACTGGCCCCAACTCTCTGGTGCTACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480201.1
ENST00000487014.5
ENST00000495942.5
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CAA 90 bp GTGAATAAAAGCACACATAAACACTCACAGACCCACAGCTTGCTCTaGTTGGACCCTGAGAGAGCCACACACAAAGAGCTGGAGGGAGTC +
Preference number: 6 (lower is better)
Translates to: VNKSTHKHSQTHSLL*LDPERATHKELEGV
Trigger: GACTCCCTCCAGCTCTTTGTGTGTGGCTCTCTCAGGGTCCAACAAGAGCAAGCTGTGGGTCTGTGAGTGTTTATGTGTGCTTTTATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414637.1
ENST00000435386.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CAA 72 bp GGCCAGTCAAGCTCGTTGGTAAGGGCTGTTGGTAGATaGATGAAAGAGTTCAAAGACATCTGCGACGCTGTG +
Preference number: 6 (lower is better)
Translates to: GQSSSLVRAVGR*MKEFKDICDAV
Trigger: CACAGCGTCGCAGATGTCTTTGAACTCTTTCATCAATCTACCAACAGCCCTTACCAACGAGCTTGACTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS TCA 72 bp GGTTGTCCAGTGTCTGGCTTGTCATTAATATGCCTTTaGGGAGGATGCTCTTTCTCTCGTTGGGGTGGAATC +
Preference number: 6 (lower is better)
Translates to: GCPVSGLSLICL*GGCSFSRWGGI
Trigger: GATTCCACCCCAACGAGAGAAAGAGCATCCTCCTCAAAGGCATATTAATGACAAGCCAGACACTGGACAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617267.4
CDS CCA 72 bp AAAGACTGCAGGATAAAGAAAACCCAAGTTGCACAGTaGCACAACTTCCGTGCTCCCTGGCTCAGTGAAGTT +
Preference number: 6 (lower is better)
Translates to: KDCRIKKTQVAQ*HNFRAPWLSEV
Trigger: AACTTCACTGAGCCAGGGAGCACGGAAGTTGTGCCACTGTGCAACTTGGGTTTTCTTTATCCTGCAGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435386.1
ENST00000612871.4
CDS CCA 72 bp TCGCATGTCAGGTTTCCCTTTATCCATGATGTTAGCTaGGTCCATTCTTGGTTGTCCAGTGTCTGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: SHVRFPFIHDVS*VHSWLSSVWLV
Trigger: GACAAGCCAGACACTGGACAACCAAGAATGGACCCAGCTAACATCATGGATAAAGGGAAACCTGACATGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617267.4
ENST00000621510.1
CDS CAA 90 bp TGTGAAGTGAATAAAAGCACACATAAACACTCACAGACCCACAGCTaGCTCTTGTTGGACCCTGAGAGAGCCACACACAAAGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: CEVNKSTHKHSQTHS*LLLDPERATHKELE
Trigger: CTCCAGCTCTTTGTGTGTGGCTCTCTCAGGGTCCAACAAGAGCAAGCTGTGGGTCTGTGAGTGTTTATGTGTGCTTTTATTCACTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414637.1
ENST00000435386.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CAA 90 bp TCCAGAAATCCTGTAGCACCAGAGAGTTGGGGCCAGTCAAGCTCGTaGGTAAGGGCTGTTGGTAGATTGATGAAAGAGTTCTTCAACTTC +
Preference number: 6 (lower is better)
Translates to: SRNPVAPESWGQSSS*VRAVGRLMKEFFNF
Trigger: GAAGTTGAAGAACTCTTTCATCAATCTACCAACAGCCCTTACCAACGAGCTTGACTGGCCCCAACTCTCTGGTGCTACAGGATTTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487014.5
CDS CAA 90 bp TCCAGAAATCCTGTAGCACCAGAGAGTTGGGGCCAGTCAAGCTCGTaGGTAAGGGCTGTTGGTAGATTGATGAAAGAGTTCAAAGACATC +
Preference number: 6 (lower is better)
Translates to: SRNPVAPESWGQSSS*VRAVGRLMKEFKDI
Trigger: GATGTCTTTGAACTCTTTCATCAATCTACCAACAGCCCTTACCAACGAGCTTGACTGGCCCCAACTCTCTGGTGCTACAGGATTTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS TCA 72 bp GGTTGTCCAGTGTCTGGCTTGTCATTAATATGCCTTTaGGGAGGATGCTCTTTCTCTGCAAACAATGCCCTC +
Preference number: 6 (lower is better)
Translates to: GCPVSGLSLICL*GGCSFSANNAL
Trigger: GAGGGCATTGTTTGCAGAGAAAGAGCATCCTCCTCAAAGGCATATTAATGACAAGCCAGACACTGGACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621510.1
CDS CAA 72 bp GGCCAGTCAAGCTCGTTGGTAAGGGCTGTTGGTAGATaGATGAAAGAGTTCTTCAACTTCATCAGGGAAGTC +
Preference number: 6 (lower is better)
Translates to: GQSSSLVRAVGR*MKEFFNFIREV
Trigger: GACTTCCCTGATGAAGTTGAAGAACTCTTTCATCAATCTACCAACAGCCCTTACCAACGAGCTTGACTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487014.5
CDS CAA 72 bp CATCTTTTGGATCGACACCCCAAATGCCATTACAGTTaGAATCCTGATGGACATCCCAGTTGTTCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: HLLDRHPKCHYS*NPDGHPSCSAF
Trigger: GAAGGCCGAACAACTGGGATGTCCATCAGGATTCAAACTGTAATGGCATTTGGGGTGTCGATCCAAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CAA 72 bp TGGTTGTCCAGTGTCTGGCTTGTCATTAATATGCCTTaGAGGAGGATGCTCTTTCTCTCGTTGGGGTGGAAT +
Preference number: 6 (lower is better)
Translates to: WLSSVWLVINMP*RRMLFLSLGWN
Trigger: ATTCCACCCCAACGAGAGAAAGAGCATCCTCCTCAAAGGCATATTAATGACAAGCCAGACACTGGACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617267.4
CDS CAA 90 bp GTCAGGTTTCCCTTTATCCATGATGTTAGCTGGGTCCATTCTTGGTaGTCCAGTGTCTGGCTTGTCATTAATATGCCTTTGAGGAGGATG +
Preference number: 6 (lower is better)
Translates to: VRFPFIHDVSWVHSW*SSVWLVINMPLRRM
Trigger: CATCCTCCTCAAAGGCATATTAATGACAAGCCAGACACTGGACAACCAAGAATGGACCCAGCTAACATCATGGATAAAGGGAAACCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617267.4
ENST00000621510.1
CDS TCA 72 bp GGTTGGCCAGTGTTCTGTTTACAAAACTCCAGAGTGTaGCATACCACATCAGCATTCATATCTGCGCTAAGC +
Preference number: 6 (lower is better)
Translates to: GWPVFCLQNSRV*HTTSAFISALS
Trigger: GCTTAGCGCAGATATGAATGCTGATGTGGTATGTCACACTCTGGAGTTTTGTAAACAGAACACTGGCCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435386.1
ENST00000543742.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS TCA 72 bp ATAGCCCCGCAGTGTTGGGAAAACGCTGTATTTGTCTaGATCCACATCTTTGAATGGCACAGACTGTTCCAT +
Preference number: 6 (lower is better)
Translates to: IAPQCWENAVFV*IHIFEWHRLFH
Trigger: ATGGAACAGTCTGTGCCATTCAAAGATGTGGATTCAGACAAATACAGCGTTTTCCCAACACTGCGGGGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS TCA 72 bp ATCTTTTGGATCGACACCCCAAATGCCATTACAGTTTaGATCCTGATGGACATCCCAGTTGTTCGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: IFWIDTPNAITV*ILMDIPVVRPS
Trigger: AGAAGGCCGAACAACTGGGATGTCCATCAGGATTCAAACTGTAATGGCATTTGGGGTGTCGATCCAAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CCA 72 bp AAGCCATACAAAATAACATGGCTGCCATTGGGCAGGTaGGAATTTAGATGCTTCAGAGTCTGCATGACGTTG +
Preference number: 6 (lower is better)
Translates to: KPYKITWLPLGR*EFRCFRVCMTL
Trigger: CAACGTCATGCAGACTCTGAAGCATCTAAATTCCCACCTGCCCAATGGCAGCCATGTTATTTTGTATGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480201.1
ENST00000487014.5
ENST00000491444.5
ENST00000495942.5
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CAA 72 bp TGGTTGTCCAGTGTCTGGCTTGTCATTAATATGCCTTaGAGGAGGATGCTCTTTCTCTGCAAACAATGCCCT +
Preference number: 6 (lower is better)
Translates to: WLSSVWLVINMP*RRMLFLCKQCP
Trigger: AGGGCATTGTTTGCAGAGAAAGAGCATCCTCCTCAAAGGCATATTAATGACAAGCCAGACACTGGACAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621510.1
CDS CAA 90 bp CTGCAGAATCAATTGATCTCTCTCTCCTTCTCTTCCTCACTCTCTTaGACACACACACCCCACCCTCTCACATACACACTTTTCAATAAG +
Preference number: 6 (lower is better)
Translates to: LQNQLISLSFSSSLS*THTPHPLTYTLFNK
Trigger: CTTATTGAAAAGTGTGTATGTGAGAGGGTGGGGTGTGTGTGTCAAAGAGAGTGAGGAAGAGAAGGAGAGAGAGATCAATTGATTCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414637.1
ENST00000435386.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CAA 90 bp AAATTTCCATGTCTCCTTGGGAAGAGGGTAGAGATGACACAATGGTaGGCCAGTGTTCTGTTTACAAAACTCCAGAGTGTGACATACCAC +
Preference number: 6 (lower is better)
Translates to: KFPCLLGKRVEMTQW*ASVLFTKLQSVTYH
Trigger: GTGGTATGTCACACTCTGGAGTTTTGTAAACAGAACACTGGCCAACCATTGTGTCATCTCTACCCTCTTCCCAAGGAGACATGGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435386.1
ENST00000543742.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CAA 90 bp GTCCATTCTTGGTTGTCCAGTGTCTGGCTTGTCATTAATATGCCTTaGAGGAGGATGCTCTTTCTCTGCAAACAATGCCCTCATTTAGCA +
Preference number: 6 (lower is better)
Translates to: VHSWLSSVWLVINMP*RRMLFLCKQCPHLA
Trigger: TGCTAAATGAGGGCATTGTTTGCAGAGAAAGAGCATCCTCCTCAAAGGCATATTAATGACAAGCCAGACACTGGACAACCAAGAATGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621510.1
CDS CCA 72 bp AGAAAGGTTCCATCTGGTAAGCCATACAAAATAACATaGCTGCCATTGGGCAGGTGGGAATTTAGATGCTTC +
Preference number: 6 (lower is better)
Translates to: RKVPSGKPYKIT*LPLGRWEFRCF
Trigger: GAAGCATCTAAATTCCCACCTGCCCAATGGCAGCCATGTTATTTTGTATGGCTTACCAGATGGAACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480201.1
ENST00000487014.5
ENST00000491444.5
ENST00000495942.5
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CCA 72 bp TTTCCCTTTATCCATGATGTTAGCTGGGTCCATTCTTaGTTGTCCAGTGTCTGGCTTGTCATTAATATGCCT +
Preference number: 6 (lower is better)
Translates to: FPFIHDVSWVHS*LSSVWLVINMP
Trigger: AGGCATATTAATGACAAGCCAGACACTGGACAACCAAGAATGGACCCAGCTAACATCATGGATAAAGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617267.4
ENST00000621510.1
CDS CAA 90 bp AATGGCACAGACTGTTCCATAGCTAATTTAATTTTCTGGCAGATCTaGGCCAAAACCGGGAGTGAACAAATGTCAGAACCACTTCTAGAA +
Preference number: 6 (lower is better)
Translates to: NGTDCSIANLIFWQI*AKTGSEQMSEPLLE
Trigger: TTCTAGAAGTGGTTCTGACATTTGTTCACTCCCGGTTTTGGCCAAGATCTGCCAGAAAATTAAATTAGCTATGGAACAGTCTGTGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000543742.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CAA 72 bp AAGAAGGACCAATCTGATTCTTTCAAACATTTGGAATaGGTGTTAAAAATGTTCGGCTTCACCCTGGGCTAC +
Preference number: 6 (lower is better)
Translates to: KKDQSDSFKHLE*VLKMFGFTLGY
Trigger: GTAGCCCAGGGTGAAGCCGAACATTTTTAACACCAATTCCAAATGTTTGAAAGAATCAGATTGGTCCTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543742.1
CDS CAA 90 bp TACTGTTTCAAGAAGGACCAATCTGATTCTTTCAAACATTTGGAATaGGTGTTAAAAATGTTCGGCTTCACCCTGGGCTACTCTCAGAAT +
Preference number: 6 (lower is better)
Translates to: YCFKKDQSDSFKHLE*VLKMFGFTLGYSQN
Trigger: ATTCTGAGAGTAGCCCAGGGTGAAGCCGAACATTTTTAACACCAATTCCAAATGTTTGAAAGAATCAGATTGGTCCTTCTTGAAACAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543742.1
CDS TCA 72 bp TTTAATTTTCTGGCAGATCTTGGCCAAAACCGGGAGTaGACAAATGTCAGAACCACTTCTAGAATATTTCAG +
Preference number: 6 (lower is better)
Translates to: FNFLADLGQNRE*TNVRTTSRIFQ
Trigger: CTGAAATATTCTAGAAGTGGTTCTGACATTTGTTCACTCCCGGTTTTGGCCAAGATCTGCCAGAAAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000543742.1
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CAA 72 bp CTTCACAGAATTTCTTCTCATATGGAACTCCATCTTTaGGATCGACACCCCAAATGCCATTACAGTTTGAAT +
Preference number: 6 (lower is better)
Translates to: LHRISSHMELHL*DRHPKCHYSLN
Trigger: ATTCAAACTGTAATGGCATTTGGGGTGTCGATCCAAAAGATGGAGTTCCATATGAGAAGAAATTCTGTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5
CDS CAA 72 bp GTTGGGAAAACGCTGTATTTGTCTGAATCCACATCTTaGAATGGCACAGACTGTTCCATAGCTAATTTAATT +
Preference number: 6 (lower is better)
Translates to: VGKTLYLSESTS*NGTDCSIANLI
Trigger: AATTAAATTAGCTATGGAACAGTCTGTGCCATTCAAAGATGTGGATTCAGACAAATACAGCGTTTTCCCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612871.4
ENST00000617267.4
ENST00000617537.5