Pregenerated sensors for ANXA8L1 (Homo sapiens)
Ensembl gene IDs: ENSG00000264230Ensembl transcript IDs: ENST00000584982.7, ENST00000611655.1, ENST00000613703.4, ENST00000619162.5, ENST00000622769.4
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AGTAGATGGGAATGGGGCTGGGGTCTGTATAACCTGTaGCCAGGAGACTCTGTGACCAGCTTGGGAAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: SRWEWGWGLYNL*PGDSVTSLGSS Trigger: GGAGCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCAGCCCCATTCCCATCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| 3UTR CCA 72 bp | CCCCTCTTGTGGAGACCCTGTTTCAGTAGATGGGAATaGGGCTGGGGTCTGTATAACCTGTGCCCAGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: PLLWRPCFSRWE*GWGLYNLCPGD Trigger: GTCTCCTGGGCACAGGTTATACAGACCCCAGCCCCATTCCCATCTACTGAAACAGGGTCTCCACAAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | GGCTGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCTCATCCCTGCTGCCCTaGAGGAGGCACACCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: GWGLYNLCPGDSVTSLGSSSLLP*RRHTRI Trigger: GATCCTGGTGTGCCTCCTGCAGGGCAGCAGGGATGA...GCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000584982.7 ENST00000613703.4 ENST00000619162.5 |
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| CDS-3UTR GCA 90 bp | GGCTGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCCGCATACAGATCCTGTaGGTCTTGGAGGGCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GWGLYNLCPGDSVTSLGSRIQIL*VLEGQC Trigger: GCACTGGCCCTCCAAGACGCACAGGATCTGTATGCG...GCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | TGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCTCCTGCTCACATCATCCCTaGTGCCCTGCAGGAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: WGLYNLCPGDSVTSLGSSCSHHP*CPAGGT Trigger: TGTGCCTCCTGCAGGGCAGCAGGGATGATGTGAGCA...GGAGCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000584982.7 ENST00000613703.4 ENST00000619162.5 |
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| CDS-3UTR GCA 90 bp | TGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCTCCCGCATACAGATCCTGTaGGTCTTGGAGGGCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: WGLYNLCPGDSVTSLGSSRIQIL*VLEGQC Trigger: GCACTGGCCCTCCAAGACGCACAGGATCTGTATGCG...GGAGCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | GGCTGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCCCCATCACGCGTCCCTaGTCCCTTCATGGCATAGTA | + |
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Preference number: 4 (lower is better) Translates to: GWGLYNLCPGDSVTSLGSPITRP*SLHGIV Trigger: TACTATGCCATGAAGGGAGCAGGGACGCGTGATGGG...GCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR TCA 90 bp | GGCTGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCACTTCAAGGTCTCAGTaGGGTCCTTGCCGAACTGAG | + |
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Preference number: 4 (lower is better) Translates to: GWGLYNLCPGDSVTSLGSTSRSQ*GPCRTE Trigger: CTCAGTTCGGCAAGGACCTCACTGAGACCTTGAAGT...GCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR TCA 90 bp | TGTTTCAGTAGATGGGAATGGGGCTGGGGTCTGTATAACCTGTGCCCAGGAGACGCCCAGGAGACTCTGTaGCCAGCTTGGGAAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CFSRWEWGWGLYNLCPGDAQETL*PAWEAP Trigger: AGGAGCTTCCCAAGCTGGTCACAGAGTCTCCTGGGC...GTCTCCTGGGCACAGGTTATACAGACCCCAGCCCCATTCCCATCTACTGAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | ACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGATGGGAATGGTCATCCCTGCTGCCCTaGAGGAGGCACACCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: THIPWPLLWRPCFSRWEWSSLLP*RRHTRI Trigger: GATCCTGGTGTGCCTCCTGCAGGGCAGCAGGGATGA...CCATTCCCATCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000584982.7 ENST00000613703.4 ENST00000619162.5 |
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| CDS-3UTR GCA 90 bp | TGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCTCCCCCATCACGCGTCCCTaGTCCCTTCATGGCATAGTA | + |
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Preference number: 4 (lower is better) Translates to: WGLYNLCPGDSVTSLGSSPITRP*SLHGIV Trigger: TACTATGCCATGAAGGGAGCAGGGACGCGTGATGGG...GGAGCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | GGCTGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCGGTCTGTATAACCTGTaGCCAGGAGACTCTGTGACC | + |
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Preference number: 4 (lower is better) Translates to: GWGLYNLCPGDSVTSLGSGLYNL*PGDSVT Trigger: GGTCACAGAGTCTCCTGGGCACAGGTTATACAGACC...GCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR CCA 90 bp | GGCTGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCAGATGGGAATGGGGCTaGGGTCTGTATAACCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GWGLYNLCPGDSVTSLGSRWEWG*GLYNLC Trigger: GCACAGGTTATACAGACCCCAGCCCCATTCCCATCT...GCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR CCA 90 bp | TGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCTCCCCCTGTTTCAGTAGATaGGAATGGGGCTGGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: WGLYNLCPGDSVTSLGSSPCFSR*EWGWGL Trigger: CAGACCCCAGCCCCATTCCCATCTACTGAAACAGGG...GGAGCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR TCA 90 bp | TGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCTCCACTTCAAGGTCTCAGTaGGGTCCTTGCCGAACTGAG | + |
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Preference number: 4 (lower is better) Translates to: WGLYNLCPGDSVTSLGSSTSRSQ*GPCRTE Trigger: CTCAGTTCGGCAAGGACCTCACTGAGACCTTGAAGT...GGAGCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | ACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGATGGGAATGGTGCTCACATCATCCCTaGTGCCCTGCAGGAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: THIPWPLLWRPCFSRWEWCSHHP*CPAGGT Trigger: TGTGCCTCCTGCAGGGCAGCAGGGATGATGTGAGCA...CCATTCCCATCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000584982.7 ENST00000613703.4 ENST00000619162.5 |
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| CDS-3UTR GCA 90 bp | TGTTTCAGTAGATGGGAATGGGGCTGGGGTCTGTATAACCTGTGCCCAGGAGACTGCTCACATCATCCCTaGTGCCCTGCAGGAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: CFSRWEWGWGLYNLCPGDCSHHP*CPAGGT Trigger: TGTGCCTCCTGCAGGGCAGCAGGGATGATGTGAGCA...GTCTCCTGGGCACAGGTTATACAGACCCCAGCCCCATTCCCATCTACTGAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000584982.7 ENST00000613703.4 ENST00000619162.5 |
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| CDS-3UTR GCA 90 bp | TGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCTCCGGTCTGTATAACCTGTaGCCAGGAGACTCTGTGACC | + |
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Preference number: 4 (lower is better) Translates to: WGLYNLCPGDSVTSLGSSGLYNL*PGDSVT Trigger: GGTCACAGAGTCTCCTGGGCACAGGTTATACAGACC...GGAGCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | TGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCTCCTGCTCACATCATCCCTaGTGCCCTTCATGGCGTCAT | + |
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Preference number: 4 (lower is better) Translates to: WGLYNLCPGDSVTSLGSSCSHHP*CPSWRH Trigger: ATGACGCCATGAAGGGCAGCAGGGATGATGTGAGCA...GGAGCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611655.1 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | AAAACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGATGGGAATCATCCCTGCTGCCCTaGAGGAGGCACACCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: KTHIPWPLLWRPCFSRWESSLLP*RRHTRI Trigger: GATCCTGGTGTGCCTCCTGCAGGGCAGCAGGGATGA...TTCCCATCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000584982.7 ENST00000613703.4 ENST00000619162.5 |
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| CDS-3UTR GCA 90 bp | GGCTGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCTGTGGAGGTTTTGGGTaGATTTCACTCTCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GWGLYNLCPGDSVTSLGSCGGFG*ISLSAG Trigger: ACCTGCTGAGAGTGAAATGCACCCAAAACCTCCACA...GCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622769.4 |
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| CDS-3UTR CCA 90 bp | TGTTTCAGTAGATGGGAATGGGGCTGGGGTCTGTATAACCTGTGCCCAGGAGACCCCTGTTTCAGTAGATaGGAATGGGGCTGGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: CFSRWEWGWGLYNLCPGDPCFSR*EWGWGL Trigger: CAGACCCCAGCCCCATTCCCATCTACTGAAACAGGG...GTCTCCTGGGCACAGGTTATACAGACCCCAGCCCCATTCCCATCTACTGAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR TCA 90 bp | TGTTTCAGTAGATGGGAATGGGGCTGGGGTCTGTATAACCTGTGCCCAGGAGACACTTCAAGGTCTCAGTaGGGTCCTTGCCGAACTGAG | + |
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Preference number: 4 (lower is better) Translates to: CFSRWEWGWGLYNLCPGDTSRSQ*GPCRTE Trigger: CTCAGTTCGGCAAGGACCTCACTGAGACCTTGAAGT...GTCTCCTGGGCACAGGTTATACAGACCCCAGCCCCATTCCCATCTACTGAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | AAAACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGATGGGAATCACATCATCCCTGCTaGCCTGCAGGAGGCACACCA | + |
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Preference number: 4 (lower is better) Translates to: KTHIPWPLLWRPCFSRWESHHPC*PAGGTP Trigger: TGGTGTGCCTCCTGCAGGGCAGCAGGGATGATGTGA...TTCCCATCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000584982.7 ENST00000613703.4 ENST00000619162.5 |
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| CDS-3UTR GCA 90 bp | AAAACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGATGGGAACGCATACAGATCCTGTaGGTCTTGGAGGGCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: KTHIPWPLLWRPCFSRWERIQIL*VLEGQC Trigger: GCACTGGCCCTCCAAGACGCACAGGATCTGTATGCG...TTCCCATCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | TGTTTCAGTAGATGGGAATGGGGCTGGGGTCTGTATAACCTGTGCCCAGGAGACGGTCTGTATAACCTGTaGCCAGGAGACTCTGTGACC | + |
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Preference number: 4 (lower is better) Translates to: CFSRWEWGWGLYNLCPGDGLYNL*PGDSVT Trigger: GGTCACAGAGTCTCCTGGGCACAGGTTATACAGACC...GTCTCCTGGGCACAGGTTATACAGACCCCAGCCCCATTCCCATCTACTGAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR CCA 90 bp | ACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGATGGGAATGGAGATGGGAATGGGGCTaGGGTCTGTATAACCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: THIPWPLLWRPCFSRWEWRWEWG*GLYNLC Trigger: GCACAGGTTATACAGACCCCAGCCCCATTCCCATCT...CCATTCCCATCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | AAAACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGATGGGAACCCATCACGCGTCCCTaGTCCCTTCATGGCATAGTA | + |
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Preference number: 4 (lower is better) Translates to: KTHIPWPLLWRPCFSRWEPITRP*SLHGIV Trigger: TACTATGCCATGAAGGGAGCAGGGACGCGTGATGGG...TTCCCATCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR TCA 90 bp | AAAACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGATGGGAAACTTCAAGGTCTCAGTaGGGTCCTTGCCGAACTGAG | + |
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Preference number: 4 (lower is better) Translates to: KTHIPWPLLWRPCFSRWETSRSQ*GPCRTE Trigger: CTCAGTTCGGCAAGGACCTCACTGAGACCTTGAAGT...TTCCCATCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR GCA 90 bp | TTGTTAAAAACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGATCACATCATCCCTGCTaGCCTGCAGGAGGCACACCA | + |
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Preference number: 4 (lower is better) Translates to: LLKTHIPWPLLWRPCFSRSHHPC*PAGGTP Trigger: TGGTGTGCCTCCTGCAGGGCAGCAGGGATGATGTGA...TCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGTTTTTAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000584982.7 ENST00000613703.4 ENST00000619162.5 |
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| CDS-3UTR GCA 90 bp | TTGTTAAAAACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGACCCATCACGCGTCCCTaGTCCCTTCATGGCATAGTA | + |
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Preference number: 4 (lower is better) Translates to: LLKTHIPWPLLWRPCFSRPITRP*SLHGIV Trigger: TACTATGCCATGAAGGGAGCAGGGACGCGTGATGGG...TCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGTTTTTAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR CCA 90 bp | TTGTTAAAAACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGAAGATGGGAATGGGGCTaGGGTCTGTATAACCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LLKTHIPWPLLWRPCFSRRWEWG*GLYNLC Trigger: GCACAGGTTATACAGACCCCAGCCCCATTCCCATCT...TCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGTTTTTAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENST00000584982.7 ENST00000611655.1 ENST00000613703.4 ENST00000619162.5 ENST00000622769.4 |
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| CDS-3UTR CAA 90 bp | TGGGGTCTGTATAACCTGTGCCCAGGAGACTCTGTGACCAGCTTGGGAAGCTCCATGATAGCCTGCTCGTaGGTCCCGATCCCCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: WGLYNLCPGDSVTSLGSSMIACS*VPIPFM Trigger: CATGAAGGGGATCGGGACCAACGAGCAGGCTATCAT...GGAGCTTCCCAAGCTGGTCACAGAGTCTCCTGGGCACAGGTTATACAGACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611655.1 ENST00000619162.5 |
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| CDS-3UTR CAA 90 bp | TTGTTAAAAACCCATATTCCCTGGCCCCTCTTGTGGAGACCCTGTTTCAGTAGAATGATAGCCTGCTCGTaGGTCCCGATCCCCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: LLKTHIPWPLLWRPCFSRMIACS*VPIPFM Trigger: CATGAAGGGGATCGGGACCAACGAGCAGGCTATCAT...TCTACTGAAACAGGGTCTCCACAAGAGGGGCCAGGGAATATGGGTTTTTAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000611655.1 ENST00000619162.5 |
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