RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANXA11 (Homo sapiens)

Ensembl gene IDs: ENSG00000122359

Ensembl transcript IDs: ENST00000265447.8, ENST00000372231.7, ENST00000422982.8, ENST00000437799.1, ENST00000438331.5, ENST00000447489.1, ENST00000463657.1, ENST00000474545.1, ENST00000481805.1

Found 980 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCAGCAGCCAGCTCTGTGGCTCCTGCCACCCCCATGCTTGCAGGTaGACTCCCTGGCTACAGGGTCAGCGGCTTAACTCTCCCTCTGGG +
Preference number: 1 (lower is better)
Translates to: LSSQLCGSCHPHACR*TPWLQGQRLNSPSG
Trigger: CCCAGAGGGAGAGTTAAGCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGCCACAGAGCTGGCTGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 90 bp GCTCCTCTCAGCAGCCAGCTCTGTGGCTCCTGCCACCCCCATGCTTaGAGGTGCACTCCCTGGCTACAGGGTCAGCGGCTTAACTCTCCC +
Preference number: 1 (lower is better)
Translates to: APLSSQLCGSCHPHA*RCTPWLQGQRLNSP
Trigger: GGGAGAGTTAAGCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGCCACAGAGCTGGCTGCTGAGAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 90 bp GAGCAGCAGGGATGGGGCTTCAGCTTGGGCTTGAGGCATGGACTCTaGCGCAGAGCTGACGTGTTGACCAGGACCTGCCATCAATCTCAG +
Preference number: 1 (lower is better)
Translates to: EQQGWGFSLGLRHGL*RRADVLTRTCHQSQ
Trigger: CTGAGATTGATGGCAGGTCCTGGTCAACACGTCAGCTCTGCGTCAGAGTCCATGCCTCAAGCCCAAGCTGAAGCCCCATCCCTGCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 90 bp TCAGGAGGCCCCCAGGGTCACCTTGAGTTCATGGCAAGTTGTATATaGCAAGCACCCCATCCCATCAGGCAGGTCCCACCTGGCACCCAA +
Preference number: 1 (lower is better)
Translates to: SGGPQGHLEFMASCI*QAPHPIRQVPPGTQ
Trigger: TTGGGTGCCAGGTGGGACCTGCCTGATGGGATGGGGTGCTTGGCATATACAACTTGCCATGAACTCAAGGTGACCCTGGGGGCCTCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 90 bp ATGGGGCTTCAGCTTGGGCTTGAGGCATGGACTCTGACGCAGAGCTaGCGTGTTGACCAGGACCTGCCATCAATCTCAGGTAGACCAGGC +
Preference number: 1 (lower is better)
Translates to: MGLQLGLEAWTLTQS*RVDQDLPSISGRPG
Trigger: GCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGTCAACACGTCAGCTCTGCGTCAGAGTCCATGCCTCAAGCCCAAGCTGAAGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 90 bp TGCAACCAACCAAGATCCCTTTGCCTTTCAGGTGTCTGGGCCTCCTaGCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCC +
Preference number: 1 (lower is better)
Translates to: CNQPRSLCLSGVWAS*LDFGNLPSHVLTSP
Trigger: GGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAGGCAAAGGGATCTTGGTTGGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 90 bp ACCAACCAAGATCCCTTTGCCTTTCAGGTGTCTGGGCCTCCTGCCTaGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCA +
Preference number: 1 (lower is better)
Translates to: TNQDPFAFQVSGPPA*ISGTSLPMSLRVPA
Trigger: TGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAGGCAAAGGGATCTTGGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 90 bp TTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTaGGCCACCAGTCACTGTTCAGTCATTGCCACCACAGATCTTCAG +
Preference number: 1 (lower is better)
Translates to: FGLFLALVLPAGGQK*ATSHCSVIATTDLQ
Trigger: CTGAAGATCTGTGGTGGCAATGACTGAACAGTGACTGGTGGCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447489.1
3UTR GCA 90 bp ACCTTCAGTGGACTTCACTGCACCTGCAACCAACCAAGATCCCTTTaGCTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTC +
Preference number: 1 (lower is better)
Translates to: TFSGLHCTCNQPRSL*LSGVWASCLDFGNL
Trigger: GAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAGGCAAAGGGATCTTGGTTGGTTGCAGGTGCAGTGAAGTCCACTGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 90 bp GGACTGCATTCTTCGCACCACACCTTCAGTGGACTTCACTGCACCTaGAACCAACCAAGATCCCTTTGCCTTTCAGGTGTCTGGGCCTCC +
Preference number: 1 (lower is better)
Translates to: GLHSSHHTFSGLHCT*NQPRSLCLSGVWAS
Trigger: GGAGGCCCAGACACCTGAAAGGCAAAGGGATCTTGGTTGGTTGCAGGTGCAGTGAAGTCCACTGAAGGTGTGGTGCGAAGAATGCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 90 bp GTTGATCCCAACCTCCCACTGACCTTGGAAGGCAGTAGGTGCCTTTaGCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCA +
Preference number: 1 (lower is better)
Translates to: VDPNLPLTLEGSRCL*LWEDHEAFMQSSSP
Trigger: TGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCAAGGTCAGTGGGAGGTTGGGATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 90 bp GCCGGCAGGTGGGCAGAAGTGAGCCACCAGTCACTGTTCAGTCATTaGCACCACAGATCTTCAGCAGAATCTTCCGGTAATCCCCTGAAG +
Preference number: 1 (lower is better)
Translates to: AGRWAEVSHQSLFSH*HHRSSAESSGNPLK
Trigger: CTTCAGGGGATTACCGGAAGATTCTGCTGAAGATCTGTGGTGGCAATGACTGAACAGTGACTGGTGGCTCACTTCTGCCCACCTGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447489.1
3UTR CCA 90 bp CAGACATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTaGGCAGAAGTGAGCCACCAGTCACTGTTCAGTCATTGCCACCAC +
Preference number: 1 (lower is better)
Translates to: QTFFWPFPGTGVAGR*AEVSHQSLFSHCHH
Trigger: GTGGTGGCAATGACTGAACAGTGACTGGTGGCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAATGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447489.1
3UTR GCA 90 bp AGGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATaGACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGC +
Preference number: 1 (lower is better)
Translates to: RSEFGSNKARDTLTR*TGYLLRHASLSLLS
Trigger: GCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 90 bp CACAAGCTGAGCCATGTCCTGGCTCCCCTCTATCTATCTGCCAGATaGTCACTCTCCCTTACAGGGGTCAATAGCTTCACTCTCTCTGGG +
Preference number: 1 (lower is better)
Translates to: HKLSHVLAPLYLSAR*SLSLTGVNSFTLSG
Trigger: CCCAGAGAGAGTGAAGCTATTGACCCCTGTAAGGGAGAGTGACCATCTGGCAGATAGATAGAGGGGAGCCAGGACATGGCTCAGCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 90 bp CCCAACCTCCCACTGACCTTGGAAGGCAGTAGGTGCCTTTGCCTCTaGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTA +
Preference number: 1 (lower is better)
Translates to: PNLPLTLEGSRCLCL*EDHEAFMQSSSPYL
Trigger: TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCAAGGTCAGTGGGAGGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 90 bp AACAGTGTTGATCCCAACCTCCCACTGACCTTGGAAGGCAGTAGGTaGCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCC +
Preference number: 1 (lower is better)
Translates to: NSVDPNLPLTLEGSR*LCLWEDHEAFMQSS
Trigger: GGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCAAGGTCAGTGGGAGGTTGGGATCAACACTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 90 bp CTCATCTCTCATCACCTGACTGAATTCCAAGCAGACTGTGCCATCTaGTCACCTGCCCTCTGGAGGAACACCTCTACTTTTGCGGTGTTC +
Preference number: 1 (lower is better)
Translates to: LISHHLTEFQADCAI*SPALWRNTSTFAVF
Trigger: GAACACCGCAAAAGTAGAGGTGTTCCTCCAGAGGGCAGGTGAGCAGATGGCACAGTCTGCTTGGAATTCAGTCAGGTGATGAGAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 90 bp GAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTAACATaGGTTGGATCTCTTGGGAGTGACCATGAGGGCAGCGAGAGGAAC +
Preference number: 1 (lower is better)
Translates to: EDHEAFMQSSSPYLT*VGSLGSDHEGSERN
Trigger: GTTCCTCTCGCTGCCCTCATGGTCACTCCCAAGAGATCCAACCCATGTTAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 90 bp TGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTaGAAACTAGTGTATGCTCAGGGTTTCCTGCACACAAATCTCTAC +
Preference number: 1 (lower is better)
Translates to: CLDFGNLPSHVLTSP*KLVYAQGFLHTNLY
Trigger: GTAGAGATTTGTGTGCAGGAAACCCTGAGCATACACTAGTTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 90 bp TTGTTAGAAACAGACATTCTTTTGGCCTTTTCCTGGCACTGGTGTTaGCGGCAGGTGGGCAGAAGTGAGCCACCAGTCACTGTTCAGTCA +
Preference number: 1 (lower is better)
Translates to: LLETDILLAFSWHWC*RQVGRSEPPVTVQS
Trigger: TGACTGAACAGTGACTGGTGGCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAATGTCTGTTTCTAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447489.1
3UTR CCA 90 bp CAGACCTCTGAGCCACAGGGCAGAATCAAGCAGAAGAAAACAAGTTaGTACCAGGAAGACATTTCCAGACCATTCCAGAGCTGGCTGACT +
Preference number: 1 (lower is better)
Translates to: QTSEPQGRIKQKKTS*YQEDISRPFQSWLT
Trigger: AGTCAGCCAGCTCTGGAATGGTCTGGAAATGTCTTCCTGGTACCAACTTGTTTTCTTCTGCTTGATTCTGCCCTGTGGCTCAGAGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 90 bp GTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTGGGAACTTTaGAGTAAACAGGGCAAGGTAATGTCACAGAATATGGTCACATCA +
Preference number: 1 (lower is better)
Translates to: VCRCNIACWAPGWEL*SKQGKVMSQNMVTS
Trigger: TGATGTGACCATATTCTGTGACATTACCTTGCCCTGTTTACTCCAAAGTTCCCAGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 90 bp GGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTaGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGAC +
Preference number: 1 (lower is better)
Translates to: GTYHKLQEALSLTGN*LCSRGFCKEDGRND
Trigger: GTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 90 bp AGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTaGGAACTTTGGAGTAAACAGGGCAAGGTAATGTCACAGAATATG +
Preference number: 1 (lower is better)
Translates to: SKCVCRCNIACWAPG*ELWSKQGKVMSQNM
Trigger: CATATTCTGTGACATTACCTTGCCCTGTTTACTCCAAAGTTCCCAGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 90 bp TTTGGAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTaGGCACCAGGCTGGGAACTTTGGAGTAAACAGGGCAAGGTAATG +
Preference number: 1 (lower is better)
Translates to: FGNQSKCVCRCNIAC*APGWELWSKQGKVM
Trigger: CATTACCTTGCCCTGTTTACTCCAAAGTTCCCAGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCCCTCTGGGCACAAGCTaGGCCATGTCCTGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: APATPMLAGALPGYRVSGPLGTS*AMSWLP
Trigger: GGGGAGCCAGGACATGGCTCAGCTTGTGCCCAGAGG...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCGCCTTTTCCTGGCACTaGTGTTGCCGGCAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVAFSWH*CCRQVG
Trigger: GCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGC...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTCCTGGCACTGGTGTTaGCGGCAGGTGGGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQASWHWC*RQVGRS
Trigger: ACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGA...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
3UTR-3UTR GCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCCTGGCACTGGTGTTaGCGGCAGGTGGGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: RLPSQARLPFSPQRGHGASWHWC*RQVGRS
Trigger: ACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGA...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGTGGGTCTCGAACTCCTaGCCTCAGGTGATCTGCCCG +
Preference number: 2 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQWVSNS*PQVICP
Trigger: CGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCCA...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACTCCTGGCACTGGTGTTaGCGGCAGGTGGGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDSWHWC*RQVGRS
Trigger: ACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGA...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAATCCTGGCACTGGTGTTaGCGGCAGGTGGGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVESWHWC*RQVGRS
Trigger: ACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGA...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
3UTR-3UTR CCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTACGGGTCAGGAGGGGTaGAAGACAGGCCTAAGCTCT +
Preference number: 2 (lower is better)
Translates to: RLPSQARLPFSPQRGHGATGQEG*KTGLSS
Trigger: AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGT...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTCCGACCCAGGTCCTGTaGCACACTATACGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSPTQVL*HTIRVR
Trigger: CCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
3UTR-3UTR GCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTTCAGCGAGGACACGGTaGTTCACCCACCCAGTCGCC +
Preference number: 2 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPSARTR*FTHPVA
Trigger: GGCGACTGGGTGGGTGAAGCACCGTGTCCTCGCTGA...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCGCCGACTATAGGGAATaGACTACAATGCCAGGTAAA +
Preference number: 2 (lower is better)
Translates to: APATPMLAGALPGYRVSGADYRE*TTMPGK
Trigger: TTTACCTGGCATTGTAGTGCATTCCCTATAGTCGGC...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTACGGGTCAGGAGGGGTaGAAGACAGGCCTAAGCTCT +
Preference number: 2 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSTGQEG*KTGLSS
Trigger: AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGT...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
3UTR-3UTR CCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGGGGGTTTCACCATGTTaGCCAGGCTGGGTCTCGAAC +
Preference number: 2 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQGVSPC*PGWVSN
Trigger: GTTCGAGACCCAGCCTGGCCAACATGGTGAAACCCC...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCTGGCACTGGTGTTaGCGGCAGGTGGGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: NKARDTLTRCTGYLLRHASWHWC*RQVGRS
Trigger: ACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGA...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTTCAGCGAGGACACGGTaGTTCACCCACCCAGTCGCC +
Preference number: 2 (lower is better)
Translates to: TRTCHQSQVDQASSQLMASARTR*FTHPVA
Trigger: GGCGACTGGGTGGGTGAAGCACCGTGTCCTCGCTGA...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGTAGAAAAGGCATCCTaGGAGAGTTCTAGACCGACC +
Preference number: 2 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQVEKAS*ESSRPT
Trigger: GGTCGGTCTAGAACTCTCTCAGGATGCCTTTTCTAC...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
3UTR-3UTR TCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTAAGCCTGGAGGCACCCTaGGGGGAGGCACTGGTCTTG +
Preference number: 2 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLSLEAP*GEALVL
Trigger: CAAGACCAGTGCCTCCCCTCAGGGTGCCTCCAGGCT...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCGCAAACAGACTTGTATaGCTCTGTCTGGCAATGACT +
Preference number: 2 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVANRLV*LCLAMT
Trigger: AGTCATTGCCAGACAGAGGCATACAAGTCTGTTTGC...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCGACACACTCACCAGATaGACAGGCTACCTTCTCAGG +
Preference number: 2 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVDTLTR*TGYLLR
Trigger: CCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTC...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp AGGCATCCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGCTTTTGGCCTTTTCCTaGCACTGGTGTTGCCGGCAG +
Preference number: 2 (lower is better)
Translates to: RHPERVLDRPRSCGTLYGLLAFS*HWCCRQ
Trigger: CTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAG...CCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGGATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
3UTR-3UTR CCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTCCGACCCAGGTCCTGTaGCACACTATACGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: TRTCHQSQVDQASSQLMAPTQVL*HTIRVR
Trigger: CCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGAGGTTGGAAAAGGAGTaGGTGGAGACCCCTGATGCA +
Preference number: 2 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQRLEKE*VETPDA
Trigger: TGCATCAGGGGTCTCCACCCACTCCTTTTCCAACCT...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTGGAGAGCAGCAGGGATaGGGCTTCAGCTTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSGEQQG*GFSLGL
Trigger: CAAGCCCAAGCTGAAGCCCCATCCCTGCTGCTCTCC...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCAATTACATGACGAAATaGAGCCAAGTCTTAGCCACA +
Preference number: 2 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVNYMTK*SQVLAT
Trigger: TGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATT...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTCCTCACCTCCCAAAGTaGTGGGATTACAGCCGTGAG +
Preference number: 2 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPPHLPK*WDYSRE
Trigger: CTCACGGCTGTAATCCCAGCACTTTGGGAGGTGAGG...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTACTCCTGCCACCCCCATaGTTGCAGGTGCACTCCCTG +
Preference number: 2 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLLLPPP*LQVHSL
Trigger: CAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAG...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTAGCCTTTTCCTGGCACTaGTGTTGCCGGCAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLAFSWH*CCRQVG
Trigger: GCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGC...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAAGTAGAAAAGGCATCCTaGGAGAGTTCTAGACCGACC +
Preference number: 2 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKVEKAS*ESSRPT
Trigger: GGTCGGTCTAGAACTCTCTCAGGATGCCTTTTCTAC...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCATTCCAGAGCTGGCTaGCTCTTAATGTGGAAACAA +
Preference number: 2 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQHSRAG*LLMWKQ
Trigger: TTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATG...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTAGAGGCACTGGTCTTGTaGCTCTCTGGGTTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLEALVL*LSGLSP
Trigger: TGGGGACAACCCAGAGAGTCACAAGACCAGTGCCTC...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGGCAAACAGACTTGTATaGCTCTGTCTGGCAATGACT +
Preference number: 2 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQANRLV*LCLAMT
Trigger: AGTCATTGCCAGACAGAGGCATACAAGTCTGTTTGC...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTTCAAACCCAAAGGCCTaGAGGAGCCAAATGGGTGAC +
Preference number: 2 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPSNPKA*RSQMGD
Trigger: GTCACCCATTTGGCTCCTGCAGGCCTTTGGGTTTGA...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTGCCTTTTCCTGGCACTaGTGTTGCCGGCAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFAFSWH*CCRQVG
Trigger: GCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGC...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACAGGCAAAGGGGAATaGTTGCATGAGTCAGAAAAA +
Preference number: 2 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDTGKGE*LHESEK
Trigger: TTTTTCTGACTCATGCAATCATTCCCCTTTGCCTGT...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCCCCAGGGTCACCTTaGGTTCATGGCAAGTTGTAT +
Preference number: 2 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSPPGSP*VHGKLY
Trigger: ATACAACTTGCCATGAACTCAAGGTGACCCTGGGGG...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGGGTGTCTGGGCCTCCTaGCTGGATTTCGGGAACCTC +
Preference number: 2 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQGVWAS*LDFGNL
Trigger: GAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACC...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTACAAGGGCAAGGGGCCTaGCCTAGCAGAGGAGTTCTT +
Preference number: 2 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLQGQGA*PSRGVL
Trigger: AAGAACTCCTCTGCTAGGGCAGGCCCCTTGCCCTTG...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTTGTCTTCTCCAGATCTaGAGCTCCTCTCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSCLLQI*SSSQQP
Trigger: TGGCTGCTGAGAGGAGCTGCAGATCTGGAGAAGACA...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTACGGGTCAGGAGGGGTaGAAGACAGGCCTAAGCTCT +
Preference number: 2 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVTGQEG*KTGLSS
Trigger: AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGT...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
3UTR-3UTR CCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAACGGGTCAGGAGGGGTaGAAGACAGGCCTAAGCTCT +
Preference number: 2 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRTGQEG*KTGLSS
Trigger: AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGT...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
3UTR-3UTR CCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTCCGACCCAGGTCCTGTaGCACACTATACGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFPTQVL*HTIRVR
Trigger: CCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTATCTGGGCCTCCTGCCTaGATTTCGGGAACCTCCCTT +
Preference number: 2 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLSGPPA*ISGTSL
Trigger: AAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGA...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTACCCTTCTTCCCTCCTaGGACCTGGGTGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: ETKVNVSVGAILPAGHQATLLPS*DLGEGL
Trigger: CAGTCCTTCACCCAGGTCCCAGGAGGGAAGAAGGGT...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CAA 90 bp TGCTCTTTAGCAAGCTCCCCTGATGATCCTGATACACACTCAGGCTaGAAAACCACCACTTTAGGACCATCTACCCAGCCACAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: CSLASSPDDPDTHSG*KTTTLGPSTQPQGE
Trigger: CTCACCCTGTGGCTGGGTAGATGGTCCTAAAGTGGTGGTTTTCAAGCCTGAGTGTGTATCAGGATCATCAGGGGAGCTTGCTAAAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGGTGGGTGGAGACCCCTaGTGCAAGGTAAGCTCTAGC +
Preference number: 2 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQVGGDP*CKVSSS
Trigger: GCTAGAGCTTACCTTGCATCAGGGGTCTCCACCCAC...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTATTGAGGCATGGACTCTaGCGCAGAGCTGACGTGTTG +
Preference number: 2 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLLRHGL*RRADVL
Trigger: CAACACGTCAGCTCTGCGTCAGAGTCCATGCCTCAA...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTACCCCCAGGGTCACCTTaGGTTCATGGCAAGTTGTAT +
Preference number: 2 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLPPGSP*VHGKLY
Trigger: ATACAACTTGCCATGAACTCAAGGTGACCCTGGGGG...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTTTCAGTGGACTTCACTaGACCTGCAACCAACCAAGA +
Preference number: 2 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPFSGLH*TCNQPR
Trigger: TCTTGGTTGGTTGCAGGTGCAGTGAAGTCCACTGAA...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGAACGGGTCAGGAGGGGTaGAAGACAGGCCTAAGCTCT +
Preference number: 2 (lower is better)
Translates to: SFLNFAPETNATRTRVRRTGQEG*KTGLSS
Trigger: AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGT...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGACCTGAGGGGAGGCACTaGTCTTGTGACTCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: SFLNFAPETNATRTRVRRPEGRH*SCDSLG
Trigger: ACCCAGAGAGTCACAAGACCAGTGCCTCCCCTCAGG...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTCTAGTTCTCAGCTCATaGCTGCTCCACACCCTTCGG +
Preference number: 2 (lower is better)
Translates to: ETKVNVSVGAILPAGHQALVLSS*LLHTLR
Trigger: CCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTATGCTGGGCACCAGGCTaGGAACTTTGGAGTAAACAG +
Preference number: 2 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLCWAPG*ELWSKQ
Trigger: CTGTTTACTCCAAAGTTCCCAGCCTGGTGCCCAGCA...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CAA 90 bp GTCCTAAGCATAATAAACAGTGTTGATCCCAACCTCCCACTGACCTaGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCA +
Preference number: 2 (lower is better)
Translates to: VLSIINSVDPNLPLT*EGSRCLCLWEDHEA
Trigger: TGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCAAGGTCAGTGGGAGGTTGGGATCAACACTGTTTATTATGCTTAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTAGTAGAAAAGGCATCCTaGGAGAGTTCTAGACCGACC +
Preference number: 2 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLVEKAS*ESSRPT
Trigger: GGTCGGTCTAGAACTCTCTCAGGATGCCTTTTCTAC...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTGCAAACAGACTTGTATaGCTCTGTCTGGCAATGACT +
Preference number: 2 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPANRLV*LCLAMT
Trigger: AGTCATTGCCAGACAGAGGCATACAAGTCTGTTTGC...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGATGCCTTTCAGGTGTCTaGGCCTCCTGCCTGGATTTC +
Preference number: 2 (lower is better)
Translates to: SFLNFAPETNATRTRVRRCLSGV*ASCLDF
Trigger: GAAATCCAGGCAGGAGGCCCAGACACCTGAAAGGCA...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGTGCCTTTCAGGTGTCTaGGCCTCCTGCCTGGATTTC +
Preference number: 2 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQCLSGV*ASCLDF
Trigger: GAAATCCAGGCAGGAGGCCCAGACACCTGAAAGGCA...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTTTCCCTCCTGGGACCTaGGTGAAGGACTGCATTCTT +
Preference number: 2 (lower is better)
Translates to: ETKVNVSVGAILPAGHQAFPPGT*VKDCIL
Trigger: AAGAATGCAGTCCTTCACCCAGGTCCCAGGAGGGAA...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTACGGCCTCAATTTCTTaGGCTCTAAGGATCTTCCTG +
Preference number: 2 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSTASIS*ALRIFL
Trigger: CAGGAAGATCCTTAGAGCCCAAGAAATTGAGGCCGT...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCAATTACATGACGAAATaGAGCCAAGTCTTAGCCACA +
Preference number: 2 (lower is better)
Translates to: NKARDTLTRCTGYLLRHANYMTK*SQVLAT
Trigger: TGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATT...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCACCAGAAATGTGTATaGAGCAAACAGACTTGTATG +
Preference number: 2 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPHQKCV*SKQTCM
Trigger: CATACAAGTCTGTTTGCTGCATACACATTTCTGGTG...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATGCCTTTTCCTGGCACTaGTGTTGCCGGCAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHAFSWH*CCRQVG
Trigger: GCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGC...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTAGACCATTCCAGAGCTaGCTGACTCTTAATGTGGAA +
Preference number: 2 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSRPFQS*LTLNVE
Trigger: TTCCACATTAAGAGTCAGCCAGCTCTGGAATGGTCT...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTGTCACCTTGAGTTCATaGCAAGTTGTATATGCCAAG +
Preference number: 2 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPVTLSS*QVVYAK
Trigger: CTTGGCATATACAACTTGCCATGAACTCAAGGTGAC...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTCACCAGAAATGTGTATaGAGCAAACAGACTTGTATG +
Preference number: 2 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPHQKCV*SKQTCM
Trigger: CATACAAGTCTGTTTGCTGCATACACATTTCTGGTG...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTAGCCGACTATAGGGAATaGACTACAATGCCAGGTAAA +
Preference number: 2 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLADYRE*TTMPGK
Trigger: TTTACCTGGCATTGTAGTGCATTCCCTATAGTCGGC...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTATCACTGACAGGGAACTaGCTTTGTTCTCGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLSLTGN*LCSRGF
Trigger: GAAACCACGAGAACAAAGCCAGTTCCCTGTCAGTGA...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATCATTCCAGAGCTGGCTaGCTCTTAATGTGGAAACAA +
Preference number: 2 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYHSRAG*LLMWKQ
Trigger: TTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATG...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATACTCTGACGCAGAGCTaGCGTGTTGACCAGGACCTG +
Preference number: 2 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHTLTQS*RVDQDL
Trigger: CAGGTCCTGGTCAACACGTCAGCTCTGCGTCAGAGT...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CAA 90 bp AAAAACACTTTGGAAACCAAAGTAAATGTGTCTGTAGGTGCAATATaGCCTGCTGGGCACCAGGCTGGGAACTTTGGAGTAAACAGGGCA +
Preference number: 2 (lower is better)
Translates to: KNTLETKVNVSVGAI*PAGHQAGNFGVNRA
Trigger: TGCCCTGTTTACTCCAAAGTTCCCAGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTCCAAAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATACAGGCAAAGGGGAATaGTTGCATGAGTCAGAAAAA +
Preference number: 2 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNTGKGE*LHESEK
Trigger: TTTTTCTGACTCATGCAATCATTCCCCTTTGCCTGT...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTATCTAGCTTCTGGACATaGCACCATAATTCTCAGAAA +
Preference number: 2 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLSSFWT*HHNSQK
Trigger: TTTCTGAGAATTATGGTGTCATGTCCAGAAGCTAGA...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTTGGGTCTCGAACTCCTaGCCTCAGGTGATCTGCCCG +
Preference number: 2 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFWVSNS*PQVICP
Trigger: CGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCCA...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACTTCCGGTAATCCCCTaGAGTATCTCCTCTAAGAGT +
Preference number: 2 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRLPVIP*SISSKS
Trigger: ACTCTTAGAGGAGATACTTCAGGGGATTACCGGAAG...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447489.1
3UTR-3UTR GCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTGCAGACTGTGCCATCTaGTCACCTGCCCTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFADCAI*SPALWR
Trigger: CCTCCAGAGGGCAGGTGAGCAGATGGCACAGTCTGC...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATCTGGCTTTGTTCTCGTaGTTTCTGCAAGGAAGATGG +
Preference number: 2 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHLALFS*FLQGRW
Trigger: CCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAG...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTTGTGGAAACAAGTTTTaGCTACAGACATTCAGGTTT +
Preference number: 2 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSCGNKF*LQTFRF
Trigger: AAACCTGAATGTCTGTAGCCAAAACTTGTTTCCACA...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATAATTACATGACGAAATaGAGCCAAGTCTTAGCCACA +
Preference number: 2 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYNYMTK*SQVLAT
Trigger: TGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATT...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATACTCAGCTCCAGCCATaGAGGAATGCAAGCCCCATA +
Preference number: 2 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHTQLQP*RNASPI
Trigger: TATGGGGCTTGCATTCCTGCATGGCTGGAGCTGAGT...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTAGGACCCAGCAGGCTTaGTCTAGCCTAGTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFRTQQA*SSLVSL
Trigger: CAGAGAGACTAGGCTAGATCAAGCCTGCTGGGTCCT...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTGCAGAGCTGACGTGTTaGCCAGGACCTGCCATCAAT +
Preference number: 2 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFAELTC*PGPAIN
Trigger: ATTGATGGCAGGTCCTGGTCAACACGTCAGCTCTGC...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR TCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTATCCCAACCTCCCACTaGCCTTGGAAGGCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFIPTSH*PWKAVG
Trigger: ACCTACTGCCTTCCAAGGTCAGTGGGAGGTTGGGAT...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTCCTCACCTCCCAAAGTaGTGGGATTACAGCCGTGAG +
Preference number: 2 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFPHLPK*WDYSRE
Trigger: CTCACGGCTGTAATCCCAGCACTTTGGGAGGTGAGG...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTAGGTGCAATATTGCCTaGTGGGCACCAGGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFRCNIA*WAPGWE
Trigger: TTCCCAGCCTGGTGCCCAGCAGGCAATATTGCACCT...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATACAGCAGGTTACAGATaGAGTTTCCCAGTCCCCACA +
Preference number: 2 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHTAGYR*SFPVPT
Trigger: TGTGGGGACTGGGAAACTGCATCTGTAACCTGCTGT...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATGTCCTTACGAGTCCCTaGAAACTAGTGTATGCTCAG +
Preference number: 2 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHVLTSP*KLVYAQ
Trigger: CTGAGCATACACTAGTTTGCAGGGACTCGTAAGGAC...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTGCACCACACCTTCAGTaGACTTCACTGCACCTGCAA +
Preference number: 2 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFAPHLQ*TSLHLQ
Trigger: TTGCAGGTGCAGTGAAGTCCACTGAAGGTGTGGTGC...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTGCCGACTATAGGGAATaGACTACAATGCCAGGTAAA +
Preference number: 2 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFADYRE*TTMPGK
Trigger: TTTACCTGGCATTGTAGTGCATTCCCTATAGTCGGC...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CAA 90 bp TGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTTaGCCACCTTATTTGCTGCTTTTGTGGAAGGACAGACTTGTGGAA +
Preference number: 2 (lower is better)
Translates to: CKLSIRFQSSHKFEF*PPYLLLLWKDRLVE
Trigger: TTCCACAAGTCTGTCCTTCCACAAAAGCAGCAAATAAGGTGGCAAAAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR GCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTCACCAGAAATGTGTATaGAGCAAACAGACTTGTATG +
Preference number: 2 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFHQKCV*SKQTCM
Trigger: CATACAAGTCTGTTTGCTGCATACACATTTCTGGTG...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTTGTGGAAACAAGTTTTaGCTACAGACATTCAGGTTT +
Preference number: 2 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFCGNKF*LQTFRF
Trigger: AAACCTGAATGTCTGTAGCCAAAACTTGTTTCCACA...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp AGGCAGGTCCCACCTGGCACCCAAGGGCAAGGGGCCTaGCCTAGCAGAGGAGTTCTTGGGAGAGCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: RQVPPGTQGQGA*PSRGVLGRAAG
Trigger: CCCTGCTGCTCTCCCAAGAACTCCTCTGCTAGGGCAGGCCCCTTGCCCTTGGGTGCCAGGTGGGACCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp TCTGCAGCTCCTCTCAGCAGCCAGCTCTGTGGCTCCTaGCACCCCCATGCTTGCAGGTGCACTCCCTGGCTA +
Preference number: 3 (lower is better)
Translates to: SAAPLSSQLCGS*HPHACRCTPWL
Trigger: TAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGCCACAGAGCTGGCTGCTGAGAGGAGCTGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp CAGCTCTGTGGCTCCTGCCACCCCCATGCTTGCAGGTaGACTCCCTGGCTACAGGGTCAGCGGCTTAACTCT +
Preference number: 3 (lower is better)
Translates to: QLCGSCHPHACR*TPWLQGQRLNS
Trigger: AGAGTTAAGCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGCCACAGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 72 bp GGATGGGGCTTCAGCTTGGGCTTGAGGCATGGACTCTaGCGCAGAGCTGACGTGTTGACCAGGACCTGCCAT +
Preference number: 3 (lower is better)
Translates to: GWGFSLGLRHGL*RRADVLTRTCH
Trigger: ATGGCAGGTCCTGGTCAACACGTCAGCTCTGCGTCAGAGTCCATGCCTCAAGCCCAAGCTGAAGCCCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 72 bp CAAATGTCATGCCCAGGGTCAGGTTCCAGCCCATGCTaGGGTTCGAGGGGACTGGGTGGATGGGCGATAGCT +
Preference number: 3 (lower is better)
Translates to: QMSCPGSGSSPC*GSRGLGGWAIA
Trigger: AGCTATCGCCCATCCACCCAGTCCCCTCGAACCTCAGCATGGGCTGGAACCTGACCCTGGGCATGACATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CAA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCGCAGAGCTGACGTGTaGACCAGGACCTGCCATCAA +
Preference number: 3 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQRRADV*TRTCHQ
Trigger: TTGATGGCAGGTCCTGGTCAACACGTCAGCTCTGCG...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 72 bp TTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTaGGCCACCAGTCACTGTTCAGTCATTGCCACCACA +
Preference number: 3 (lower is better)
Translates to: FLALVLPAGGQK*ATSHCSVIATT
Trigger: TGTGGTGGCAATGACTGAACAGTGACTGGTGGCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
3UTR GCA 72 bp CTCTCTCTGGGTGCTAGTGCACACCACGTGGAGCCATaGCCATCCGAGCCCAAGAACATCTGTACAGCGTCA +
Preference number: 3 (lower is better)
Translates to: LSLGASAHHVEP*PSEPKNICTAS
Trigger: TGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTGCACTAGCACCCAGAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 72 bp CCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTaGAAGACAGGCCTAAGCTCTAGGACGGTGAATCTC +
Preference number: 3 (lower is better)
Translates to: PGPVAHYTGQEG*KTGLSSRTVNL
Trigger: GAGATTCACCGTCCTAGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
3UTR TCA 72 bp TGTTTAGGGGGTAGTCCTCAAGCAAATGTCTGCAGATaGGCTACTCCCTGGGGCTCCTGCCAGGACCCAGCA +
Preference number: 3 (lower is better)
Translates to: CLGGSPQANVCR*ATPWGSCQDPA
Trigger: TGCTGGGTCCTGGCAGGAGCCCCAGGGAGTAGCTCATCTGCAGACATTTGCTTGAGGACTACCCCCTAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 72 bp CAGCTTGGGCTTGAGGCATGGACTCTGACGCAGAGCTaGCGTGTTGACCAGGACCTGCCATCAATCTCAGGT +
Preference number: 3 (lower is better)
Translates to: QLGLEAWTLTQS*RVDQDLPSISG
Trigger: ACCTGAGATTGATGGCAGGTCCTGGTCAACACGTCAGCTCTGCGTCAGAGTCCATGCCTCAAGCCCAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp CCAAGATCCCTTTGCCTTTCAGGTGTCTGGGCCTCCTaGCTGGATTTCGGGAACCTCCCTTCCCATGTCCTT +
Preference number: 3 (lower is better)
Translates to: PRSLCLSGVWAS*LDFGNLPSHVL
Trigger: AAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAGGCAAAGGGATCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp CCCCAGGGTCACCTTGAGTTCATGGCAAGTTGTATATaGCAAGCACCCCATCCCATCAGGCAGGTCCCACCT +
Preference number: 3 (lower is better)
Translates to: PQGHLEFMASCI*QAPHPIRQVPP
Trigger: AGGTGGGACCTGCCTGATGGGATGGGGTGCTTGGCATATACAACTTGCCATGAACTCAAGGTGACCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp ACTGTCCACCTTTACCTAGGCTGTCTTCTCCAGATCTaGAGCTCCTCTCAGCAGCCAGCTCTGTGGCTCCTG +
Preference number: 3 (lower is better)
Translates to: TVHLYLGCLLQI*SSSQQPALWLL
Trigger: CAGGAGCCACAGAGCTGGCTGCTGAGAGGAGCTGCAGATCTGGAGAAGACAGCCTAGGTAAAGGTGGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CAA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTCCTCAACGCAGGAGGTaGGAAAAGGAGTGGGTGGAG +
Preference number: 3 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPPQRRR*EKEWVE
Trigger: CTCCACCCACTCCTTTTCCAACCTCCTGCGTTGAGG...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp AGGCCTAAAGGGGCAGCTGCAACTCAGCTCCAGCCATaGAGGAATGCAAGCCCCATAGTGCCAGAATTTCTG +
Preference number: 3 (lower is better)
Translates to: RPKGAAATQLQP*RNASPIVPEFL
Trigger: CAGAAATTCTGGCACTATGGGGCTTGCATTCCTGCATGGCTGGAGCTGAGTTGCAGCTGCCCCTTTAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 72 bp CCACTGACCTTGGAAGGCAGTAGGTGCCTTTGCCTCTaGGAAGATCATGAGGCATTCATGCAGTCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: PLTLEGSRCLCL*EDHEAFMQSSS
Trigger: GCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCAAGGTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 72 bp GAGGCATTCATGCAGTCCTCCAGCCCATACTTAACATaGGTTGGATCTCTTGGGAGTGACCATGAGGGCAGC +
Preference number: 3 (lower is better)
Translates to: EAFMQSSSPYLT*VGSLGSDHEGS
Trigger: GCTGCCCTCATGGTCACTCCCAAGAGATCCAACCCATGTTAAGTATGGGCTGGAGGACTGCATGAATGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CAA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTGCCCCCAGGGTCACCTaGAGTTCATGGCAAGTTGTA +
Preference number: 3 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSAPRVT*SSWQVV
Trigger: TACAACTTGCCATGAACTCAAGGTGACCCTGGGGGC...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp TTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATaGACAGGCTACCTTCTCAGGCACGCCTCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: FGSNKARDTLTR*TGYLLRHASLS
Trigger: AGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp TTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTaGAAACTAGTGTATGCTCAGGGTTTCCTGCACACA +
Preference number: 3 (lower is better)
Translates to: FGNLPSHVLTSP*KLVYAQGFLHT
Trigger: TGTGTGCAGGAAACCCTGAGCATACACTAGTTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 72 bp ACAATTCAGGAGGCCCCCAGGGTCACCTTGAGTTCATaGCAAGTTGTATATGCCAAGCACCCCATCCCATCA +
Preference number: 3 (lower is better)
Translates to: TIQEAPRVTLSS*QVVYAKHPIPS
Trigger: TGATGGGATGGGGTGCTTGGCATATACAACTTGCCATGAACTCAAGGTGACCCTGGGGGCCTCCTGAATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 72 bp AGCCATGTCCTGGCTCCCCTCTATCTATCTGCCAGATaGTCACTCTCCCTTACAGGGGTCAATAGCTTCACT +
Preference number: 3 (lower is better)
Translates to: SHVLAPLYLSAR*SLSLTGVNSFT
Trigger: AGTGAAGCTATTGACCCCTGTAAGGGAGAGTGACCATCTGGCAGATAGATAGAGGGGAGCCAGGACATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CAA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAAATGCAGCAAACAGACTaGTATGCCTCTGTCTGGCAA +
Preference number: 3 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKMQQTD*YASVWQ
Trigger: TTGCCAGACAGAGGCATACAAGTCTGTTTGCTGCAT...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 72 bp GGTCTCAAACCCAAAGGCCTGCAGGAGCCAAATGGGTaGCATGGGCTTAGTGTAATACAAGACGGAGCCTAT +
Preference number: 3 (lower is better)
Translates to: GLKPKGLQEPNG*HGLSVIQDGAY
Trigger: ATAGGCTCCGTCTTGTATTACACTAAGCCCATGTCACCCATTTGGCTCCTGCAGGCCTTTGGGTTTGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CAA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGACATGGGTTGGATCTCTaGGGAGTGACCATGAGGGCA +
Preference number: 3 (lower is better)
Translates to: SFLNFAPETNATRTRVRRHGLDL*GVTMRA
Trigger: TGCCCTCATGGTCACTCCCAAGAGATCCAACCCATG...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 72 bp GATTTGTTAGAAACAGACATTCTTTTGGCCTTTTCCTaGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAG +
Preference number: 3 (lower is better)
Translates to: DLLETDILLAFS*HWCCRQVGRSE
Trigger: CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAATGTCTGTTTCTAACAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
3UTR CCA 72 bp CAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTaGGCACCAGGCTGGGAACTTTGGAGTAAACAGGGC +
Preference number: 3 (lower is better)
Translates to: QSKCVCRCNIAC*APGWELWSKQG
Trigger: GCCCTGTTTACTCCAAAGTTCCCAGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 72 bp AGAAAATGGGCATGGCATGGCATTAAACCACCACTTTaGCCGTGGGCACCTGCAAAGGTTCATCTTTCAGCT +
Preference number: 3 (lower is better)
Translates to: RKWAWHGIKPPL*PWAPAKVHLSA
Trigger: AGCTGAAAGATGAACCTTTGCAGGTGCCCACGGTCAAAGTGGTGGTTTAATGCCATGCCATGCCCATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 72 bp TGCAATATTGCCTGCTGGGCACCAGGCTGGGAACTTTaGAGTAAACAGGGCAAGGTAATGTCACAGAATATG +
Preference number: 3 (lower is better)
Translates to: CNIACWAPGWEL*SKQGKVMSQNM
Trigger: CATATTCTGTGACATTACCTTGCCCTGTTTACTCCAAAGTTCCCAGCCTGGTGCCCAGCAGGCAATATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CAA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGAATGCAGCAAACAGACTaGTATGCCTCTGTCTGGCAA +
Preference number: 3 (lower is better)
Translates to: SFLNFAPETNATRTRVRRMQQTD*YASVWQ
Trigger: TTGCCAGACAGAGGCATACAAGTCTGTTTGCTGCAT...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 72 bp TCACTCTGGCCTGGATATCCACCTTGGTCTATTCCTTaGCCAAAGCACATCCATGTACTTTACAACAGGTGG +
Preference number: 3 (lower is better)
Translates to: SLWPGYPPWSIP*PKHIHVLYNRW
Trigger: CCACCTGTTGTAAAGTACATGGATGTGCTTTGGTCAAGGAATAGACCAAGGTGGATATCCAGGCCAGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 72 bp AACCACCACTTTAGGACCATCTACCCAGCCACAGGGTaGGCACTCCAAGGTTTCTTTCTTAAATTTTGCACC +
Preference number: 3 (lower is better)
Translates to: NHHFRTIYPATG*ALQGFFLKFCT
Trigger: GGTGCAAAATTTAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGTGGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp TTCCCATGTCCTTACGAGTCCCTGCAAACTAGTGTATaGTCAGGGTTTCCTGCACACAAATCTCTACGTAAG +
Preference number: 3 (lower is better)
Translates to: FPCPYESLQTSV*SGFPAHKSLRK
Trigger: CTTACGTAGAGATTTGTGTGCAGGAAACCCTGAGCATACACTAGTTTGCAGGGACTCGTAAGGACATGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 72 bp CACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTaGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGA +
Preference number: 3 (lower is better)
Translates to: HKLQEALSLTGN*LCSRGFCKEDG
Trigger: TCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CAA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTGGATGGGGCTTCAGCTaGGGCTTGAGGCATGGACTC +
Preference number: 3 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFGWGFS*GLRHGL
Trigger: GAGTCCATGCCTCAAGCCCAAGCTGAAGCCCCATCC...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 72 bp GCAGGAGAAGACCCATTGTGTTCTATCCCAGAAAGATaGCCTGTAAGGTTGCACATCTTTCTCCCTATCTTT +
Preference number: 3 (lower is better)
Translates to: AGEDPLCSIPER*PVRLHIFLPIF
Trigger: AAAGATAGGGAGAAAGATGTGCAACCTTACAGGTCATCTTTCTGGGATAGAACACAATGGGTCTTCTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CAA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATGCCTGGATATCCACCTaGGTCTATTCCTTGACCAAA +
Preference number: 3 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHAWIST*VYSLTK
Trigger: TTTGGTCAAGGAATAGACCAAGGTGGATATCCAGGC...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CAA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTGTATACCTGGTGGGCTaGACTGACTCCTTTACTGAC +
Preference number: 3 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFVYLVG*TDSFTD
Trigger: GTCAGTAAAGGAGTCAGTCAAGCCCACCAGGTATAC...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR-3UTR CAA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTATGCAGCAAACAGACTaGTATGCCTCTGTCTGGCAA +
Preference number: 3 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFMQQTD*YASVWQ
Trigger: TTGCCAGACAGAGGCATACAAGTCTGTTTGCTGCAT...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CCA 72 bp ACAGCTGCTGAAAATTCTCTCAGGGCTGAATTCATCTaGTGCTTCTATTTTAGAAGTCAGACTAGATGTGTA +
Preference number: 3 (lower is better)
Translates to: TAAENSLRAEFI*CFYFRSQTRCV
Trigger: TACACATCTAGTCTGACTTCTAAAATAGAAGCACCAGATGAATTCAGCCCTGAGAGAATTTTCAGCAGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp GTTCCCATAAATTTGAGTTTTTGCCACCTTATTTGCTaGTTTTGTGGAAGGACAGACTTGTGGAATTTCCTA +
Preference number: 3 (lower is better)
Translates to: VPINLSFCHLIC*FCGRTDLWNFL
Trigger: TAGGAAATTCCACAAGTCTGTCCTTCCACAAAAGCAGCAAATAAGGTGGCAAAAACTCAAATTTATGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR TCA 72 bp TACCTTTTCCAAACAATAGTGGCTTTGAGCCAAGTATaGACTTACACAAGCAGGTTATATAACAAGTGGAGT +
Preference number: 3 (lower is better)
Translates to: YLFQTIVALSQV*TYTSRLYNKWS
Trigger: ACTCCACTTGTTATATAACCTGCTTGTGTAAGTTCATACTTGGCTCAAAGCCACTATTGTTTGGAAAAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR GCA 72 bp CTAAATCCAGCTTTTATTCTTAGGTATTCACCTGATTaGTGTAAACTTTCAATTCGTTTCCAGAGTTCCCAT +
Preference number: 3 (lower is better)
Translates to: LNPAFILRYSPD*CKLSIRFQSSH
Trigger: ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAGAATAAAAGCTGGATTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCGCCGCCAGGGGGCACTaGTGGGTAGCCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQAAARGH*WVASPR
Trigger: CCTGGGGCTGGCTACCCACCAGTGCCCCCTGGCGGC...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCCTCGGCACTGGCTGCTaGTGCCCAGGGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGLGTGC*CPGSGT
Trigger: AGTGCCACTCCCTGGGCAGCAGCAGCCAGTGCCGAG...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCGGGACCACCACCTGGTaGAGCTGGTGGGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGGTTTW*SWWVAT
Trigger: GGTGGCTACCCACCAGCTGCACCAGGTGGTGGTCCC...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGGCGGCGCCTGGGTTCTaGCTAGGGGCTGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRAAPGF*LGAGSH
Trigger: GTGGGACCCAGCCCCTAGGCAGAACCCAGGCGCCGC...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCCTCCTGCCACCCCCATaGTTGCAGGTGCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGLLPPP*LQVHSL
Trigger: CAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAG...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCAGCCTGGAGGCACCCTaGGGGGAGGCACTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSSLEAP*GEALVL
Trigger: CAAGACCAGTGCCTCCCCTCAGGGTGCCTCCAGGCT...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCCCCCATGCTTGCAGGTaGACTCCCTGGCTACAGGGT +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGPHACR*TPWLQG
Trigger: ACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGG...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCTGGTGGGTAGCCACCTaGGGGCGGGGGATAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGWWVAT*GRGIAR
Trigger: CCTGGCTATCCCCCGCCCCCAGGTGGCTACCCACCA...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCCCAACCTGGTGCAGCTaGTGGGTAGCCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQAPTWCS*WVATWG
Trigger: CCCCCAGGTGGCTACCCACCAGCTGCACCAGGTTGG...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR CCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCCGTTATCCAGCCCGATaGGGGGCATGCTGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQARYPAR*GACWAE
Trigger: CTCCGCCCAGCATGCCCCCCATCGGGCTGGATAACG...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCAGGGTAGGTCACTGGTaGCTGCCCAGGGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVRVGHW*LPRVGP
Trigger: GGGGCCTACCCTGGGCAGCCACCAGTGACCTACCCT...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCCCTCGGCTTCCAAACTaGGTTGGGGGCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSPRLPN*VGGTAG
Trigger: CCCCGCTGTGCCCCCAACCCAGTTTGGAAGCCGAGG...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCACCACCTGGTGCAGCTaGTGGGTAGCCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQATTWCS*WVATWG
Trigger: CCCCCAGGTGGCTACCCACCAGCTGCACCAGGTGGT...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCCTCCTGCCACCCCCATaGTTGCAGGTGCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVLLPPP*LQVHSL
Trigger: CAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAG...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCCAGCTCTGTGGCTCCTaGCACCCCCATGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSQLCGS*HPHACR
Trigger: CCTGCAAGCATGGGGGTGGCAGGAGCCACAGAGCTG...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTACCTGGTGCAGCTGGTaGGTAGCCACCTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RLPSQARLPFSPQRGHGATWCSW*VATWGR
Trigger: CCGCCCCCAGGTGGCTACCCACCAGCTGCACCAGGT...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCGTTATCCAGCCCGATaGGGGGCATGCTGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGRYPAR*GACWAE
Trigger: CTCCGCCCAGCATGCCCCCCATCGGGCTGGATAACG...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGGGGCATCCTGGAGGGTaGGTTTCCTCCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRGHPGG*VSSWGW
Trigger: CCACCCCCAGGAGGAAACCCACCCTCCAGGATGCCC...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCACCAGGGTAGGTCACTaGTGGCTGCCCAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQATRVGH*WLPRVG
Trigger: GCCTACCCTGGGCAGCCACCAGTGACCTACCCTGGT...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCACGGGTCAGGAGGGGTaGAAGACAGGCCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGTGQEG*KTGLSS
Trigger: AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGT...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGACGCGAGGGGCGAAATaGGACGTGGGCGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQTRGAK*DVGGSG
Trigger: GCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGT...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGACCACCTGGTGCAGCTaGTGGGTAGCCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRTTWCS*WVATWG
Trigger: CCCCCAGGTGGCTACCCACCAGCTGCACCAGGTGGT...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTCCAGGGACCACCACCTaGTGCAGCTGGTGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: RPRSCGTLYGSGGVEDRPPGTTT*CSWWVA
Trigger: GGCTACCCACCAGCTGCACCAGGTGGTGGTCCCTGG...AGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGCCCCAGACACACACCTaGCCACGGGGACTCCGGACG +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQPQTHT*PRGLRT
Trigger: CGTCCGGAGTCCCCGTGGCCAGGTGTGTGTCTGGGG...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422982.8
CDS-3UTR TCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCTGGGTCTCGAACTCCTaGCCTCAGGTGATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVWVSNS*PQVICP
Trigger: CGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCCA...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGCTCGGCACTGGCTGCTaGTGCCCAGGGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQLGTGC*CPGSGT
Trigger: AGTGCCACTCCCTGGGCAGCAGCAGCCAGTGCCGAG...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCCAGTCAATGATGGCCTaGTCATCCGTCCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGQSMMA*SSVPKP
Trigger: AGGCTTCGGGACGGATGAGCAGGCCATCATTGACTG...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTTCACCACGGCCAGCATaGCCTCCTCCAGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSSPRPA*PPPGPR
Trigger: CCGGGGACCTGGAGGAGGGCATGCTGGCCGTGGTGA...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR GCA 90 bp CGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTTCAGCGAGGACACGGTaGTTCACCCACCCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: RPRSCGTLYGSGGVEDRPSARTR*FTHPVA
Trigger: GGCGACTGGGTGGGTGAAGCACCGTGTCCTCGCTGA...AGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGAGGGTAGGTCACTGGTaGCTGCCCAGGGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQRVGHW*LPRVGP
Trigger: GGGGCCTACCCTGGGCAGCCACCAGTGACCTACCCT...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCACCAGGGTAGGTCACTaGTGGCTGCCCAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGTRVGH*WLPRVG
Trigger: GCCTACCCTGGGCAGCCACCAGTGACCTACCCTGGT...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCGCCGCATACAGCTCCTaGGCATCTCTCTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQAAAYSS*ASLWAS
Trigger: ACTCGCCCAGAGAGATGCCCAGGAGCTGTATGCGGC...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAAACTGCTACCAGGTaGGCCCGGCTCCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: RPRSCGTLYGSGGVEDRPKTATR*ARLREH
Trigger: GTGCTCCCGGAGCCGGGCCCACCTGGTAGCAGTTTT...AGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGGCCTTTTCCTGGCACTaGTGTTGCCGGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRAFSWH*CCRQVG
Trigger: GCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGC...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCTGCCTTTCAGGTGTCTaGGCCTCCTGCCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGCLSGV*ASCLDF
Trigger: GAAATCCAGGCAGGAGGCCCAGACACCTGAAAGGCA...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCTCATCACGGTTTCCCTaGGAGAGAGAGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGSSRFP*EREMRS
Trigger: GCTCCTCATCTCTCTCTCTCAGGGAAACCGTGATGA...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCGCTGCGAGACACCATaGTGCGAATCAGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGRCETP*CESGSG
Trigger: ACCGGACCCTGATTCGCATCATGGTGTCTCGCAGCG...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCGTGGGTGGAGACCCCTaGTGCAAGGTAAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSVGGDP*CKVSSS
Trigger: GCTAGAGCTTACCTTGCATCAGGGGTCTCCACCCAC...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCGCAAATGTCTGCAGATaGGCTACTCCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVANVCR*ATPWGS
Trigger: GGAGCCCCAGGGAGTAGCTCATCTGCAGACATTTGC...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCCTCTGGGCACAAGCTaGGCCATGTCCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQPLGTS*AMSWLP
Trigger: GGGGAGCCAGGACATGGCTCAGCTTGTGCCCAGAGG...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCGAAAGTAGGATCTGCTaGCGCTGCTTGTTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGESRIC*RCLLER
Trigger: TCGCTCCAACAAGCAGCGGCAGCAGATCCTACTTTC...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCGGATGTGCTCATTGCTaGGGGAAGCGAGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGGCAHC*GKRGSQ
Trigger: TTGAGATCCTCGCTTCCCGCAGCAATGAGCACATCC...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCAGGAGCCGCTGGAAGTaGCCTGATGTGTCGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSRSRWK*PDVSLR
Trigger: TCGAAGCGACACATCAGGGCACTTCCAGCGGCTCCT...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCGCGGCGCCTGGGTTCTaGCTAGGGGCTGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHAAAPGF*LGAGSH
Trigger: GTGGGACCCAGCCCCTAGGCAGAACCCAGGCGCCGC...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGGGGACCACCACCTGGTaGAGCTGGTGGGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQGTTTW*SWWVAT
Trigger: GGTGGCTACCCACCAGCTGCACCAGGTGGTGGTCCC...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCGGTGTCTGGGCCTCCTaGCTGGATTTCGGGAACCTC +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGGVWAS*LDFGNL
Trigger: GAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACC...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGCAGTGCCAGCCAACCTaGTGCAGCTGGTGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQQCQPT*CSWWVA
Trigger: GGCTACCCACCAGCTGCACCAGGTTGGCTGGCACTG...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR CCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACGGGCATCCTGGAGGGTaGGTTTCCTCCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDGHPGG*VSSWGW
Trigger: CCACCCCCAGGAGGAAACCCACCCTCCAGGATGCCC...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCCTCGGCTTCCAAACTaGGTTGGGGGCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVPRLPN*VGGTAG
Trigger: CCCCGCTGTGCCCCCAACCCAGTTTGGAAGCCGAGG...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCTCCTGGGCATCTCTCTaGGCGAGTGACATGTCCACG +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVSWASL*ASDMST
Trigger: CGTGGACATGTCACTCGCCCAGAGAGATGCCCAGGA...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCACGGGTCAGGAGGGGTaGAAGACAGGCCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSTGQEG*KTGLSS
Trigger: AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGT...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCGACCCAGGTCCTGTaGCACACTATACGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRPTQVL*HTIRVR
Trigger: CCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGTTCTGCCTAGGGGCTaGGTCCCACTCCCGCTCGCG +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGVLPRG*VPLPLA
Trigger: CGCGAGCGGGAGTGGGACCCAGCCCCTAGGCAGAAC...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGGGACGTGGGCGGGAGTaGCTCTCTCCGCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTGRGRE*LSPRAS
Trigger: GGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCC...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTGGACGTGGGCGGGAGTaGCTCTCTCCGCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: TRTCHQSQVDQASSQLMAGRGRE*LSPRAS
Trigger: GGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCC...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGGGGCGAAATGGGACGTaGGCGGGAGTGGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQGRNGT*AGVALS
Trigger: GGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCC...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGGGCGAAATGGGACGTaGGCGGGAGTGGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEGRNGT*AGVALS
Trigger: GGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCC...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCAGCCAGGGTAGCTCATaGTTAGATCTGGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVSQGSS*LDLATG
Trigger: CCCCGTGGCCAGATCTAACCATGAGCTACCCTGGCT...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372231.7
CDS-3UTR CCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCACCCTTCTTCCCTCCTaGGACCTGGGTGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSTLLPS*DLGEGL
Trigger: CAGTCCTTCACCCAGGTCCCAGGAGGGAAGAAGGGT...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCCCTGAGGGGAGGCACTaGTCTTGTGACTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSPEGRH*SCDSLG
Trigger: ACCCAGAGAGTCACAAGACCAGTGCCTCCCCTCAGG...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCAGAGATAGTCCTGGTTaGACTGCCCCGCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSRDSPG*TAPHRW
Trigger: CCACCTATGCGGGGCAGTTCAACCAGGACTATCTCT...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCCTCATGGCCTTGTTaGGCCTCTCCGCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRPSWPC*ASPQRR
Trigger: CCTTCTTTGCGGAGAGGCTCAACAAGGCCATGAGGG...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCAGGACCCAGCAGGCTTaGTCTAGCCTAGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQARTQQA*SSLVSL
Trigger: CAGAGAGACTAGGCTAGATCAAGCCTGCTGGGTCCT...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAGGAGCCGCTGGAAGTaGCCTGATGTGTCGCTTCGA +
Preference number: 4 (lower is better)
Translates to: RPRSCGTLYGSGGVEDRPRSRWK*PDVSLR
Trigger: TCGAAGCGACACATCAGGGCACTTCCAGCGGCTCCT...AGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCACATCTCCCGGCAGATaGTCTTCTCAATGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVTSPGR*SSQCPG
Trigger: GCCGGGACATTGAGAAGAGCATCTGCCGGGAGATGT...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTTCACCACGGCCAGCATaGCCTCCTCCAGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPSPRPA*PPPGPR
Trigger: CCGGGGACCTGGAGGAGGGCATGCTGGCCGTGGTGA...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCCCTCACCTCCCAAAGTaGTGGGATTACAGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVPHLPK*WDYSRE
Trigger: CTCACGGCTGTAATCCCAGCACTTTGGGAGGTGAGG...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCAGGTGCAATATTGCCTaGTGGGCACCAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSRCNIA*WAPGWE
Trigger: TTCCCAGCCTGGTGCCCAGCAGGCAATATTGCACCT...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCCAGCAAGAAGGCCCTTaGCAGATGCAGCCTCACGAT +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVQQEGP*QMQPHD
Trigger: ATCGTGAGGCTGCATCTGGCAAGGGCCTTCTTGCTG...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCATCCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGAGGGTAGGTCACTGGTaGCTGCCCAGGGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RHPERVLDRPRSCGTLYGRVGHW*LPRVGP
Trigger: GGGGCCTACCCTGGGCAGCCACCAGTGACCTACCCT...CCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGGATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTACCAGGGTAGGTCACTaGTGGCTGCCCAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSTRVGH*WLPRVG
Trigger: GCCTACCCTGGGCAGCCACCAGTGACCTACCCTGGT...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCTGGGTAGCTCGGCACTaGCTGCTGCTGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSWVARH*LLLPRE
Trigger: CTCCCTGGGCAGCAGCAGCCAGTGCCGAGCTACCCA...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGATGGGTAGCTCGGCACTaGCTGCTGCTGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGWVARH*LLLPRE
Trigger: CTCCCTGGGCAGCAGCAGCCAGTGCCGAGCTACCCA...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCAGACCCCGGGTATCCTaGGTAGCTCGGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPRPRVS*VARHWL
Trigger: CAGCCAGTGCCGAGCTACCCAGGATACCCGGGGTCT...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTAGACCCCGGGTATCCTaGGTAGCTCGGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSRPRVS*VARHWL
Trigger: CAGCCAGTGCCGAGCTACCCAGGATACCCGGGGTCT...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGCTGCCGCTGCTTGTTaGAGCGACTCCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEAAAAC*SDSPGS
Trigger: ACTGCCTGGGGAGTCGCTCCAACAAGCAGCGGCAGC...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGTCTGGGCCTCCTGCCTaGATTTCGGGAACCTCCCTT +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRSGPPA*ISGTSL
Trigger: AAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGA...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTTCTGGGCCTCCTGCCTaGATTTCGGGAACCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RPRSCGTLYGSGGVEDRPSGPPA*ISGTSL
Trigger: AAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGA...AGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTGAGGGGAGGCACTaGTCTTGTGACTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRPEGRH*SCDSLG
Trigger: ACCCAGAGAGTCACAAGACCAGTGCCTCCCCTCAGG...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCCTAGTTCTCAGCTCATaGCTGCTCCACACCCTTCGG +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSLVLSS*LLHTLR
Trigger: CCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTGCAGGTGCACTCCCTaGCTACAGGGTCAGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RLPSQARLPFSPQRGHGACRCTP*LQGQRL
Trigger: AAGCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCA...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCAGCCGGGAGCATCAGTaGTGGTGCCTCGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPSREHQ*WCLGFQ
Trigger: TTGGAAGCCGAGGCACCATCACTGATGCTCCCGGCT...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAATCCCCAGGCAGTCAATaGTGGCCTGCTCATCCGTCC +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVESPGSQ*WPAHPS
Trigger: GGACGGATGAGCAGGCCATCATTGACTGCCTGGGGA...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTTCCCCAGGCAGTCAATaGTGGCCTGCTCATCCGTCC +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSSPGSQ*WPAHPS
Trigger: GGACGGATGAGCAGGCCATCATTGACTGCCTGGGGA...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCCGCTGGAAGTGCCCTaGTGTGTCGCTTCGAATGGC +
Preference number: 4 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVPLEVP*CVASNG
Trigger: GCCATTCGAAGCGACACATCAGGGCACTTCCAGCGG...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTCCTGAGAGAGAGAGATaGGGAGCCGCTGGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSPERER*GAAGSA
Trigger: GGCACTTCCAGCGGCTCCTCATCTCTCTCTCTCAGG...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCATCTCTCTGGGCGAGTaGCATGTCCACGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVISLGE*HVHVCA
Trigger: AGCACAAACGTGGACATGTCACTCGCCCAGAGAGAT...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCAGCCTGGAGGCACCCTaGGGGGAGGCACTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHASLEAP*GEALVL
Trigger: CAAGACCAGTGCCTCCCCTCAGGGTGCCTCCAGGCT...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCTTGAGGCATGGACTCTaGCGCAGAGCTGACGTGTTG +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGLRHGL*RRADVL
Trigger: CAACACGTCAGCTCTGCGTCAGAGTCCATGCCTCAA...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCTCTGGGCACAAGCTaGGCCATGTCCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPPLGTS*AMSWLP
Trigger: GGGGAGCCAGGACATGGCTCAGCTTGTGCCCAGAGG...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGATCAGCGAGGACACGGTaGTTCACCCACCCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGSARTR*FTHPVA
Trigger: GGCGACTGGGTGGGTGAAGCACCGTGTCCTCGCTGA...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGGCGGCGCCTGGGTTCTaGCTAGGGGCTGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLAAPGF*LGAGSH
Trigger: GTGGGACCCAGCCCCTAGGCAGAACCCAGGCGCCGC...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCGTCCTTACGAGTCCCTaGAAACTAGTGTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGVLTSP*KLVYAQ
Trigger: CTGAGCATACACTAGTTTGCAGGGACTCGTAAGGAC...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCGGTGTCTGGGCCTCCTaGCTGGATTTCGGGAACCTC +
Preference number: 4 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVGVWAS*LDFGNL
Trigger: GAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACC...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCATGGCAAGTTGTATATaGCAAGCACCCCATCCCATC +
Preference number: 4 (lower is better)
Translates to: APATPMLAGALPGYRVSGMASCI*QAPHPI
Trigger: GATGGGATGGGGTGCTTGGCATATACAACTTGCCAT...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCACTCAGCTCCAGCCATaGAGGAATGCAAGCCCCATA +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVTQLQP*RNASPI
Trigger: TATGGGGCTTGCATTCCTGCATGGCTGGAGCTGAGT...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCGGCAGTAGGTGCCTTTaGCTCTGGGAAGATCATGAG +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQAGSRCL*LWEDHE
Trigger: CTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCC...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTTGGTGGGTAGCCACCTaGGGGCGGGGGATAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TRTCHQSQVDQASSQLMAWWVAT*GRGIAR
Trigger: CCTGGCTATCCCCCGCCCCCAGGTGGCTACCCACCA...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCGTTATCCAGCCCGATaGGGGGCATGCTGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPRYPAR*GACWAE
Trigger: CTCCGCCCAGCATGCCCCCCATCGGGCTGGATAACG...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCACAGGTTGGGCATGTTaGCTCCTCCAAATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVTGWAC*LLQMSQ
Trigger: CTGGGACATTTGGAGGAGCCAACATGCCCAACCTGT...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGCTTCCAAACTGGGTTaGGGGCACAGCGGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGASKLG*GHSGGD
Trigger: GTCACCCCCGCTGTGCCCCCAACCCAGTTTGGAAGC...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACTCCCGAAGCCTTTCATaGCCTTCCGCAGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDSRSLS*PSAGPR
Trigger: CCGAGGTCCTGCGGAAGGCCATGAAAGGCTTCGGGA...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTGCCGCATACAGCTCCTaGGCATCTCTCTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSAAYSS*ASLWAS
Trigger: ACTCGCCCAGAGAGATGCCCAGGAGCTGTATGCGGC...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCCCGACCCAGGTCCTGTaGCACACTATACGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPPTQVL*HTIRVR
Trigger: CCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GAGGGGTGGAAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGGCGAAATGGGACGTaGGCGGGAGTGGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: EGWKTGLSSRTVNLGAICGRNGT*AGVALS
Trigger: GGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCC...ACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTTCCACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCCCAGGGACCACCACCTaGTGCAGCTGGTGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHAPGTTT*CSWWVA
Trigger: GGCTACCCACCAGCTGCACCAGGTGGTGGTCCCTGG...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTGGGGTTTCACCATGTTaGCCAGGCTGGGTCTCGAAC +
Preference number: 4 (lower is better)
Translates to: RLPSQARLPFSPQRGHGAGVSPC*PGWVSN
Trigger: GTTCGAGACCCAGCCTGGCCAACATGGTGAAACCCC...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCTGCAATATTGCCTGCTaGGCACCAGGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSCNIAC*APGWEL
Trigger: AAGTTCCCAGCCTGGTGCCCAGCAGGCAATATTGCA...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTGCAATATTGCCTGCTaGGCACCAGGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQACNIAC*APGWEL
Trigger: AAGTTCCCAGCCTGGTGCCCAGCAGGCAATATTGCA...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTCGCTGAGTCACTCTaGCCTGGATATCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGLAESL*PGYPPW
Trigger: CCAAGGTGGATATCCAGGCCAGAGTGACTCAGCGAG...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGACCGCTGGAAGTGCCCTaGTGTGTCGCTTCGAATGGC +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGPLEVP*CVASNG
Trigger: GCCATTCGAAGCGACACATCAGGGCACTTCCAGCGG...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTGAGGCACTGGTCTTGTaGCTCTCTGGGTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSEALVL*LSGLSP
Trigger: TGGGGACAACCCAGAGAGTCACAAGACCAGTGCCTC...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAACTCTGACGCAGAGCTaGCGTGTTGACCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVETLTQS*RVDQDL
Trigger: CAGGTCCTGGTCAACACGTCAGCTCTGCGTCAGAGT...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGTTGCTGCTCAGAGGCTaGTCAGCTGTGCTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRLLLRG*SAVLAK
Trigger: CTTTGCTAGCACAGCTGAGCAGCCTCTGAGCAGCAA...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR GCA 90 bp CGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTGAAAGTAGGATCTGCTaGCGCTGCTTGTTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: RPRSCGTLYGSGGVEDRPESRIC*RCLLER
Trigger: TCGCTCCAACAAGCAGCGGCAGCAGATCCTACTTTC...AGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCAAGGAAAGTAGGATCTaGTGCCGCTGCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQAKESRI*CRCLLE
Trigger: CTCCAACAAGCAGCGGCAGCAGATCCTACTTTCCTT...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTGGATGTGCTCATTGCTaGGGGAAGCGAGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: RPRSCGTLYGSGGVEDRPGCAHC*GKRGSQ
Trigger: TTGAGATCCTCGCTTCCCGCAGCAATGAGCACATCC...AGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCGTGTTGACCAGGACCTaGCATCAATCTCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVVLTRT*HQSQVD
Trigger: GTCTACCTGAGATTGATGGCAGGTCCTGGTCAACAC...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCAAGGGCAAGGGGCCTaGCCTAGCAGAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVQGQGA*PSRGVL
Trigger: AAGAACTCCTCTGCTAGGGCAGGCCCCTTGCCCTTG...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCAGCTCTGTGGCTCCTaGCACCCCCATGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSEQLCGS*HPHACR
Trigger: CCTGCAAGCATGGGGGTGGCAGGAGCCACAGAGCTG...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTTGTCTTCTCCAGATCTaGAGCTCCTCTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RPRSCGTLYGSGGVEDRPCLLQI*SSSQQP
Trigger: TGGCTGCTGAGAGGAGCTGCAGATCTGGAGAAGACA...AGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTTCTGACCGCAGGAACTaGTCTTTAGCAAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RPRSCGTLYGSGGVEDRPSDRRN*SLASSP
Trigger: AGGGGAGCTTGCTAAAGAGCAGTTCCTGCGGTCAGA...AGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCGCAGACTGTGCCATCTaGTCACCTGCCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSADCAI*SPALWR
Trigger: CCTCCAGAGGGCAGGTGAGCAGATGGCACAGTCTGC...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCATGTCCCAGACATGTTaGCCGCCATTCCCGAGAGAT +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGMSQTC*PPFPRD
Trigger: ATCTCTCGGGAATGGCGGCCAACATGTCTGGGACAT...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCCCCAGGGTACAGGTTaGGCATGTTGGCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQPQGTG*ACWLLQ
Trigger: TTGGAGGAGCCAACATGCCCAACCTGTACCCTGGGG...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGGCCGCCAGGGGGCACTaGTGGGTAGCCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALAARGH*WVASPR
Trigger: CCTGGGGCTGGCTACCCACCAGTGCCCCCTGGCGGC...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTGCTTCCAAACTGGGTTaGGGGCACAGCGGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPASKLG*GHSGGD
Trigger: GTCACCCCCGCTGTGCCCCCAACCCAGTTTGGAAGC...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACGAGATGAGGAGCCGCTaGAAGTGCCCTGATGTGTCG +
Preference number: 4 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDEMRSR*KCPDVS
Trigger: CGACACATCAGGGCACTTCCAGCGGCTCCTCATCTC...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCGCCTTTTCCTGGCACTaGTGTTGCCGGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHAAFSWH*CCRQVG
Trigger: GCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGC...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCGGTCTTGTGACTCTCTaGGTTGTCCCCATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGGLVTL*VVPILL
Trigger: GAGAAGGATGGGGACAACCCAGAGAGTCACAAGACC...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGTGCAATATTGCCTGCTaGGCACCAGGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRCNIAC*APGWEL
Trigger: AAGTTCCCAGCCTGGTGCCCAGCAGGCAATATTGCA...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGCTCGCTGAGTCACTCTaGCCTGGATATCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQLAESL*PGYPPW
Trigger: CCAAGGTGGATATCCAGGCCAGAGTGACTCAGCGAG...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCAGGTGCCTTTGCCTCTaGGAAGATCATGAGGCATTC +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSRCLCL*EDHEAF
Trigger: GAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCT...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACAGAGATAGTCCTGGTTaGACTGCCCCGCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDRDSPG*TAPHRW
Trigger: CCACCTATGCGGGGCAGTTCAACCAGGACTATCTCT...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGTCCCCAGGCAGTCAATaGTGGCCTGCTCATCCGTCC +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSESPGSQ*WPAHPS
Trigger: GGACGGATGAGCAGGCCATCATTGACTGCCTGGGGA...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCAGTGCCAACCCCCTTaGTGGCTTCCTTTATCTCAT +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRQCQPP*WLPLSH
Trigger: ATGAGATAAAGGAAGCCATCAAGGGGGTTGGCACTG...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGGCATCCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGCCCTCATGGCCTTGTTaGGCCTCTCCGCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RHPERVLDRPRSCGTLYGPSWPC*ASPQRR
Trigger: CCTTCTTTGCGGAGAGGCTCAACAAGGCCATGAGGG...CCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGGATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp CGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTGCTTATACTCTGATCTaGTGTCCAGGAGGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: RPRSCGTLYGSGGVEDRPAYTLI*CPGGRS
Trigger: AGACCGACCTCCTGGACATCAGATCAGAGTATAAGC...AGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTGGGTCTCGAACTCCTaGCCTCAGGTGATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHAWVSNS*PQVICP
Trigger: CGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCCA...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCAGGACCCAGCAGGCTTaGTCTAGCCTAGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPRTQQA*SSLVSL
Trigger: CAGAGAGACTAGGCTAGATCAAGCCTGCTGGGTCCT...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGGCAGAGCTGACGTGTTaGCCAGGACCTGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQAELTC*PGPAIN
Trigger: ATTGATGGCAGGTCCTGGTCAACACGTCAGCTCTGC...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCTTGAGGCATGGACTCTaGCGCAGAGCTGACGTGTTG +
Preference number: 4 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVLRHGL*RRADVL
Trigger: CAACACGTCAGCTCTGCGTCAGAGTCCATGCCTCAA...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTCTCATCACCTGACTaGATTCCAAGCAGACTGTGC +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGLSSPD*IPSRLC
Trigger: GCACAGTCTGCTTGGAATTCAGTCAGGTGATGAGAG...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCGTCCAGGTTGTGGACTaGGTAATGATGTCCCTATCC +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGVQVVD*VMMSLS
Trigger: GGATAGGGACATCATTACTCAGTCCACAACCTGGAC...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTCGGATGTGCTCATTaGTGCGGGAAGCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVLGCAH*CGKRGS
Trigger: AGATCCTCGCTTCCCGCAGCAATGAGCACATCCGAG...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCTTTAATTCTCGGATGTaGTCATTGCTGCGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVFNSRM*SLLREA
Trigger: CGCTTCCCGCAGCAATGAGCACATCCGAGAATTAAA...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCACATCTCCCGGCAGATaGTCTTCTCAATGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPTSPGR*SSQCPG
Trigger: GCCGGGACATTGAGAAGAGCATCTGCCGGGAGATGT...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTACATCTCCCGGCAGATaGTCTTCTCAATGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSTSPGR*SSQCPG
Trigger: GCCGGGACATTGAGAAGAGCATCTGCCGGGAGATGT...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR GCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTGACACACTCACCAGATaGACAGGCTACCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RLPSQARLPFSPQRGHGADTLTR*TGYLLR
Trigger: CCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTC...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGACACACTCACCAGATaGACAGGCTACCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQDTLTR*TGYLLR
Trigger: CCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTC...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTCAACCAAGATCCCTTTaGCTTTCAGGTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RLPSQARLPFSPQRGHGAQPRSL*LSGVWA
Trigger: GGCCCAGACACCTGAAAGGCAAAGGGATCTTGGTTG...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGACCTGGGTGAAGGACTaGATTCTTCGCACCACACCT +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQTWVKD*ILRTTP
Trigger: AGGTGTGGTGCGAAGAATGCAGTCCTTCACCCAGGT...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTTCTCAGCTCATGGCTaGTCCACACCCTTCGGATGT +
Preference number: 4 (lower is better)
Translates to: RLPSQARLPFSPQRGHGAFSAHG*STPFGC
Trigger: ACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAA...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCGCAGACTGTGCCATCTaGTCACCTGCCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHAADCAI*SPALWR
Trigger: CCTCCAGAGGGCAGGTGAGCAGATGGCACAGTCTGC...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCTTGACCGTGGGCACCTaGAAAGGTTCATCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGLTVGT*KGSSFS
Trigger: GCTGAAAGATGAACCTTTGCAGGTGCCCACGGTCAA...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTATGCTTTCCTCTACATaGCAGCTTCGGATCGGCTCT +
Preference number: 4 (lower is better)
Translates to: RPRSCGTLYGSGGVEDRPMLSST*QLRIGS
Trigger: AGAGCCGATCCGAAGCTGCCATGTAGAGGAAAGCAT...AGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR CCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCATTCGACATCATCATaGGGCCTCTGGCCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGHSTSS*GLWPVR
Trigger: TCTAACAGGCCAGAGGCCCCATGATGATGTCGAATG...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR CCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGCGTTATCCAGCCCGATaGGGGGCATGCTGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLRYPAR*GACWAE
Trigger: CTCCGCCCAGCATGCCCCCCATCGGGCTGGATAACG...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTGGGCATCCTGGAGGGTaGGTTTCCTCCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSGHPGG*VSSWGW
Trigger: CCACCCCCAGGAGGAAACCCACCCTCCAGGATGCCC...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGAGGGTAGGTCACTGGTaGCTGCCCAGGGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLRVGHW*LPRVGP
Trigger: GGGGCCTACCCTGGGCAGCCACCAGTGACCTACCCT...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGCCTCGGCTTCCAAACTaGGTTGGGGGCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLPRLPN*VGGTAG
Trigger: CCCCGCTGTGCCCCCAACCCAGTTTGGAAGCCGAGG...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCGGCTTCCAAACTaGGTTGGGGGCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSPRLPN*VGGTAG
Trigger: CCCCGCTGTGCCCCCAACCCAGTTTGGAAGCCGAGG...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTTCCCGAAGCCTTTCATaGCCTTCCGCAGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPSRSLS*PSAGPR
Trigger: CCGAGGTCCTGCGGAAGGCCATGAAAGGCTTCGGGA...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGGCTGCCGCTGCTTGTTaGAGCGACTCCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTAAAAC*SDSPGS
Trigger: ACTGCCTGGGGAGTCGCTCCAACAAGCAGCGGCAGC...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCCTGGCTTTGTTCTCGTaGTTTCTGCAAGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQALALFS*FLQGRW
Trigger: CCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAG...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCCTGGCTTTGTTCTCGTaGTTTCTGCAAGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVLALFS*FLQGRW
Trigger: CCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAG...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTCACTGACAGGGAACTaGCTTTGTTCTCGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQASLTGN*LCSRGF
Trigger: GAAACCACGAGAACAAAGCCAGTTCCCTGTCAGTGA...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTGGACGTGGGCGGGAGTaGCTCTCTCCGCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFGRGRE*LSPRAS
Trigger: GGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCC...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTTTCACCATGTTaGCCAGGCTGGGTCTCGAAC +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGGVSPC*PGWVSN
Trigger: GTTCGAGACCCAGCCTGGCCAACATGGTGAAACCCC...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGCAGTGCCAACCCCCTTaGTGGCTTCCTTTATCTCAT +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQQCQPP*WLPLSH
Trigger: ATGAGATAAAGGAAGCCATCAAGGGGGTTGGCACTG...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGTCATCACGGTTTCCCTaGGAGAGAGAGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQSSRFP*EREMRS
Trigger: GCTCCTCATCTCTCTCTCTCAGGGAAACCGTGATGA...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCATCTCTCTGGGCGAGTaGCATGTCCACGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPISLGE*HVHVCA
Trigger: AGCACAAACGTGGACATGTCACTCGCCCAGAGAGAT...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCTTCTCTGGTACTCATTaGAAACTGCTACCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGFSGTH*KLLPGG
Trigger: CCCACCTGGTAGCAGTTTTCAATGAGTACCAGAGAA...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp GAGGGGTGGAAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTCCCTCATGGCCTTGTTaGGCCTCTCCGCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: EGWKTGLSSRTVNLGAICPSWPC*ASPQRR
Trigger: CCTTCTTTGCGGAGAGGCTCAACAAGGCCATGAGGG...ACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTTCCACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGCATCCGCTTATACTCTaGTCTGATGTCCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQHPLIL*SDVQEV
Trigger: GACCTCCTGGACATCAGATCAGAGTATAAGCGGATG...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCGTGGGTGGAGACCCCTaGTGCAAGGTAAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHAVGGDP*CKVSSS
Trigger: GCTAGAGCTTACCTTGCATCAGGGGTCTCCACCCAC...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCCCCCAGGGTCACCTTaGGTTCATGGCAAGTTGTAT +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQPPGSP*VHGKLY
Trigger: ATACAACTTGCCATGAACTCAAGGTGACCCTGGGGG...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCCTCTGGGCACAAGCTaGGCCATGTCCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYPLGTS*AMSWLP
Trigger: GGGGAGCCAGGACATGGCTCAGCTTGTGCCCAGAGG...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTTCCGGTAATCCCCTaGAGTATCTCCTCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGLPVIP*SISSKS
Trigger: ACTCTTAGAGGAGATACTTCAGGGGATTACCGGAAG...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR GCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATTCACCACGGCCAGCATaGCCTCCTCCAGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNSPRPA*PPPGPR
Trigger: CCGGGGACCTGGAGGAGGGCATGCTGGCCGTGGTGA...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACCAGTCACTGTTCAGTCATTGCCACCACAGATCTTCAGCAGAATCTTCCGGTATCACCACGGCCAGCATaGCCTCCTCCAGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TSHCSVIATTDLQQNLPVSPRPA*PPPGPR
Trigger: CCGGGGACCTGGAGGAGGGCATGCTGGCCGTGGTGA...TACCGGAAGATTCTGCTGAAGATCTGTGGTGGCAATGACTGAACAGTGACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR GCA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAACCGGTCCTTTGTTCCTaGCCCCCTCATGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKPVLCS*PPHGLV
Trigger: AACAAGGCCATGAGGGGGGCAGGAACAAAGGACCGG...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTTCAGCGAGGACACGGTaGTTCACCCACCCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQASARTR*FTHPVA
Trigger: GGCGACTGGGTGGGTGAAGCACCGTGTCCTCGCTGA...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAACCAAGATCCCTTTaGCTTTCAGGTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQQPRSL*LSGVWA
Trigger: GGCCCAGACACCTGAAAGGCAAAGGGATCTTGGTTG...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCTTCAGTGGACTTCACTaGACCTGCAACCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGFSGLH*TCNQPR
Trigger: TCTTGGTTGGTTGCAGGTGCAGTGAAGTCCACTGAA...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTCAAACCCAAAGGCCTaGAGGAGCCAAATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPSNPKA*RSQMGD
Trigger: GTCACCCATTTGGCTCCTGCAGGCCTTTGGGTTTGA...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGTGCCATCTGCTCACCTaGCCTCTGGAGGAACACCTC +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSECHLLT*PLEEHL
Trigger: GAGGTGTTCCTCCAGAGGGCAGGTGAGCAGATGGCA...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTGCAGACTGTGCCATCTaGTCACCTGCCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRTCHQSQVDQASSQLMAADCAI*SPALWR
Trigger: CCTCCAGAGGGCAGGTGAGCAGATGGCACAGTCTGC...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCGGTCAGAGCTCTTTCTaGTTCAGGACTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGGQSSF*FRTSSA
Trigger: AGCTGATGAAGTCCTGAAGCAGAAAGAGCTCTGACC...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTGCCACCTTATTTGCTaGTTTTGTGGAAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQACHLIC*FCGRTD
Trigger: GTCTGTCCTTCCACAAAAGCAGCAAATAAGGTGGCA...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TCTCTGGCCCCCGCCGAGGGGCACCAGGAATTAGCACACACCCTTCTTCCCTCCTGCCACCTTATTTGCTaGTTTTGTGGAAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: SLAPAEGHQELAHTLLPSCHLIC*FCGRTD
Trigger: GTCTGTCCTTCCACAAAAGCAGCAAATAAGGTGGCA...GGAGGGAAGAAGGGTGTGTGCTAATTCCTGGTGCCCCTCGGCGGGGGCCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGATGGTGGGTAGCCACCTaGGGGCGGGGGATAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRWWVAT*GRGIAR
Trigger: CCTGGCTATCCCCCGCCCCCAGGTGGCTACCCACCA...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCGTGGCAGGATCTGGATaGCAGGATTTCTACTATAGA +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQAVAGSG*QDFYYR
Trigger: TCTATAGTAGAAATCCTGCCATCCAGATCCTGCCAC...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR CCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACATGTCCCAGACATGTTaGCCGCCATTCCCGAGAGAT +
Preference number: 4 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDMSQTC*PPFPRD
Trigger: ATCTCTCGGGAATGGCGGCCAACATGTCTGGGACAT...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCATGTCCCAGACATGTTaGCCGCCATTCCCGAGAGAT +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPMSQTC*PPFPRD
Trigger: ATCTCTCGGGAATGGCGGCCAACATGTCTGGGACAT...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCACAGGTTGGGCATGTTaGCTCCTCCAAATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPTGWAC*LLQMSQ
Trigger: CTGGGACATTTGGAGGAGCCAACATGCCCAACCTGT...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCCAGGGTACAGGTTaGGCATGTTGGCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPPQGTG*ACWLLQ
Trigger: TTGGAGGAGCCAACATGCCCAACCTGTACCCTGGGG...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCATCCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGGTTTCCTCCTGGGGGTaGATACATCCCATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RHPERVLDRPRSCGTLYGVSSWG*IHPIGR
Trigger: CCTCCCTATGGGATGTATCCACCCCCAGGAGGAAAC...CCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGGATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGTTTCCTCCTGGGGGTaGATACATCCCATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGVSSWG*IHPIGR
Trigger: CCTCCCTATGGGATGTATCCACCCCCAGGAGGAAAC...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCGATATGAGGGCATCCTaGAGGGTGGGTTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSDMRAS*RVGFLL
Trigger: CAGGAGGAAACCCACCCTCCAGGATGCCCTCATATC...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACTGGGTAGCTCGGCACTaGCTGCTGCTGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYWVARH*LLLPRE
Trigger: CTCCCTGGGCAGCAGCAGCCAGTGCCGAGCTACCCA...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGTCCCGAAGCCTTTCATaGCCTTCCGCAGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTSRSLS*PSAGPR
Trigger: CCGAGGTCCTGCGGAAGGCCATGAAAGGCTTCGGGA...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTGCTGCCGCTGCTTGTTaGAGCGACTCCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSAAAAC*SDSPGS
Trigger: ACTGCCTGGGGAGTCGCTCCAACAAGCAGCGGCAGC...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGTCCTGGGCATCTCTCTaGGCGAGTGACATGTCCACG +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSESWASL*ASDMST
Trigger: CGTGGACATGTCACTCGCCCAGAGAGATGCCCAGGA...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTGCCTTTTCCTGGCACTaGTGTTGCCGGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAAFSWH*CCRQVG
Trigger: GCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGC...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGACGGGTCAGGAGGGGTaGAAGACAGGCCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSETGQEG*KTGLSS
Trigger: AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGT...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGATGCCTTTCAGGTGTCTaGGCCTCCTGCCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGCLSGV*ASCLDF
Trigger: GAAATCCAGGCAGGAGGCCCAGACACCTGAAAGGCA...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGCACCACACCTTCAGTaGACTTCACTGCACCTGCAA +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEAPHLQ*TSLHLQ
Trigger: TTGCAGGTGCAGTGAAGTCCACTGAAGGTGTGGTGC...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCTCAACGCAGGAGGTTaGAAAAGGAGTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQLNAGG*KRSGWR
Trigger: TCTCCACCCACTCCTTTTCCAACCTCCTGCGTTGAG...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGACGGCCTCAATTTCTTaGGCTCTAAGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRTASIS*ALRIFL
Trigger: CAGGAAGATCCTTAGAGCCCAAGAAATTGAGGCCGT...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTGGAGAGCAGCAGGGATaGGGCTTCAGCTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TRTCHQSQVDQASSQLMAGEQQG*GFSLGL
Trigger: CAAGCCCAAGCTGAAGCCCCATCCCTGCTGCTCTCC...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTGCTGGGCACCAGGCTaGGAACTTTGGAGTAAACAG +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPCWAPG*ELWSKQ
Trigger: CTGTTTACTCCAAAGTTCCCAGCCTGGTGCCCAGCA...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACTGCTGGGCACCAGGCTaGGAACTTTGGAGTAAACAG +
Preference number: 4 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDCWAPG*ELWSKQ
Trigger: CTGTTTACTCCAAAGTTCCCAGCCTGGTGCCCAGCA...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGTGCAGGTGCACTCCCTaGCTACAGGGTCAGCGGCTT +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTCRCTP*LQGQRL
Trigger: AAGCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCA...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTAGGTGCCTTTGCCTCTaGGAAGATCATGAGGCATTC +
Preference number: 4 (lower is better)
Translates to: RLPSQARLPFSPQRGHGARCLCL*EDHEAF
Trigger: GAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCT...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGAGCCGGGAGCATCAGTaGTGGTGCCTCGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLSREHQ*WCLGFQ
Trigger: TTGGAAGCCGAGGCACCATCACTGATGCTCCCGGCT...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACCAGTGCCAACCCCCTTaGTGGCTTCCTTTATCTCAT +
Preference number: 4 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDQCQPP*WLPLSH
Trigger: ATGAGATAAAGGAAGCCATCAAGGGGGTTGGCACTG...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAAGCACAGAACCGCATTaGACTTGGACTCGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVESTEPH*TWTRLF
Trigger: GAACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCT...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp AGGCATCCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGAGGCTGGGGTATTCTTaGGACATTTCACCACGGCCA +
Preference number: 4 (lower is better)
Translates to: RHPERVLDRPRSCGTLYGRLGYS*DISPRP
Trigger: TGGCCGTGGTGAAATGTCTCAAGAATACCCCAGCCT...CCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGGATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCAGGCTGGGGTATTCTTaGGACATTTCACCACGGCCA +
Preference number: 4 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSRLGYS*DISPRP
Trigger: TGGCCGTGGTGAAATGTCTCAAGAATACCCCAGCCT...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTCCCTCATGGCCTTGTTaGGCCTCTCCGCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPPSWPC*ASPQRR
Trigger: CCTTCTTTGCGGAGAGGCTCAACAAGGCCATGAGGG...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGCGCTGCGAGACACCATaGTGCGAATCAGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLRCETP*CESGSG
Trigger: ACCGGACCCTGATTCGCATCATGGTGTCTCGCAGCG...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACGTAGAAAAGGCATCCTaGGAGAGTTCTAGACCGACC +
Preference number: 4 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDVEKAS*ESSRPT
Trigger: GGTCGGTCTAGAACTCTCTCAGGATGCCTTTTCTAC...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGTAGAAAAGGCATCCTaGGAGAGTTCTAGACCGACC +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEVEKAS*ESSRPT
Trigger: GGTCGGTCTAGAACTCTCTCAGGATGCCTTTTCTAC...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAGCCTGGAGGCACCCTaGGGGGAGGCACTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRSLEAP*GEALVL
Trigger: CAAGACCAGTGCCTCCCCTCAGGGTGCCTCCAGGCT...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGGCATCCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGCCTCTGGGAAGATCATaGGGCATTCATGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RHPERVLDRPRSCGTLYGPLGRS*GIHAVL
Trigger: GAGGACTGCATGAATGCCTCATGATCTTCCCAGAGG...CCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAAGCATGGACTGGCCTTaGCTAACATATCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGSMDWP*LTYPGG
Trigger: GCCTCCTGGATATGTTAGTCAAGGCCAGTCCATGCT...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAACTCTCATCACCTGACTaGATTCCAAGCAGACTGTGC +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVELSSPD*IPSRLC
Trigger: GCACAGTCTGCTTGGAATTCAGTCAGGTGATGAGAG...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGCAACAAATCAGGGGCTaGGCTGAGATCAGAATAAGG +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQQQIRG*AEIRIR
Trigger: CCTTATTCTGATCTCAGCTCAGCCCCTGATTTGTTG...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GAGGGGTGGAAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTCAGTCAATGATGGCCTaGTCATCCGTCCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: EGWKTGLSSRTVNLGAICQSMMA*SSVPKP
Trigger: AGGCTTCGGGACGGATGAGCAGGCCATCATTGACTG...ACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTTCCACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTAGGATCTGCTGCCGCTaGTTGTTGGAGCGACTCCCC +
Preference number: 4 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSRICCR*LLERLP
Trigger: GGGGAGTCGCTCCAACAAGCAGCGGCAGCAGATCCT...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCTCGGATGTGCTCATTaGTGCGGGAAGCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPLGCAH*CGKRGS
Trigger: AGATCCTCGCTTCCCGCAGCAATGAGCACATCCGAG...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGAGGAGCCGCTGGAAGTaGCCTGATGTGTCGCTTCGA +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTRSRWK*PDVSLR
Trigger: TCGAAGCGACACATCAGGGCACTTCCAGCGGCTCCT...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGACATCTCCCGGCAGATaGTCTTCTCAATGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSETSPGR*SSQCPG
Trigger: GCCGGGACATTGAGAAGAGCATCTGCCGGGAGATGT...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR GCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCACATCTCCCGGCAGATaGTCTTCTCAATGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHATSPGR*SSQCPG
Trigger: GCCGGGACATTGAGAAGAGCATCTGCCGGGAGATGT...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTCCGGTCCTTTGTTCCTaGCCCCCTCATGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: TRTCHQSQVDQASSQLMAPVLCS*PPHGLV
Trigger: AACAAGGCCATGAGGGGGGCAGGAACAAAGGACCGG...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAACCTCACCTCCCAAAGTaGTGGGATTACAGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKPHLPK*WDYSRE
Trigger: CTCACGGCTGTAATCCCAGCACTTTGGGAGGTGAGG...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGGTGTTGACCAGGACCTaGCATCAATCTCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQVLTRT*HQSQVD
Trigger: GTCTACCTGAGATTGATGGCAGGTCCTGGTCAACAC...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTATGGCAAGTTGTATATaGCAAGCACCCCATCCCATC +
Preference number: 4 (lower is better)
Translates to: RLPSQARLPFSPQRGHGAMASCI*QAPHPI
Trigger: GATGGGATGGGGTGCTTGGCATATACAACTTGCCAT...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTGGAAGGCAGTAGGTaGCTTTGCCTCTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPLEGSR*LCLWED
Trigger: ATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCAA...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGCATAGCTTGCTGGCATaGAGGAGATACTCGAGATGT +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQHSLLA*RRYSRC
Trigger: ACATCTCGAGTATCTCCTGCATGCCAGCAAGCTATG...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR CCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCAGCTGGGTGCCCGATaGGCATTCGACATCATCATG +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPQLGAR*AFDIIM
Trigger: CATGATGATGTCGAATGCCCATCGGGCACCCAGCTG...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR CCA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCACAGGTTGGGCATGTTaGCTCCTCCAAATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSTGWAC*LLQMSQ
Trigger: CTGGGACATTTGGAGGAGCCAACATGCCCAACCTGT...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGGTTTCCTCCTGGGGGTaGATACATCCCATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSEVSSWG*IHPIGR
Trigger: CCTCCCTATGGGATGTATCCACCCCCAGGAGGAAAC...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGGATATGAGGGCATCCTaGAGGGTGGGTTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSEDMRAS*RVGFLL
Trigger: CAGGAGGAAACCCACCCTCCAGGATGCCCTCATATC...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTAACCAGGGTAGGTCACTaGTGGCTGCCCAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLTRVGH*WLPRVG
Trigger: GCCTACCCTGGGCAGCCACCAGTGACCTACCCTGGT...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGATGTGTCGCTTCGAATaGCCTCTTCCAGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQMCRFE*PLPGSF
Trigger: AAAAGACCCTGGAAGAGGCCATTCGAAGCGACACAT...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTGCCGCATACAGCTCCTaGGCATCTCTCTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAAAYSS*ASLWAS
Trigger: ACTCGCCCAGAGAGATGCCCAGGAGCTGTATGCGGC...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCTTTTGGCCTTTTCCTaGCACTGGTGTTGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSELLAFS*HWCCRQ
Trigger: CTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAG...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTGTTCTGCCTAGGGGCTaGGTCCCACTCCCGCTCGCG +
Preference number: 4 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFVLPRG*VPLPLA
Trigger: CGCGAGCGGGAGTGGGACCCAGCCCCTAGGCAGAAC...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGAACGCGAGGGGCGAAATaGGACGTGGGCGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SFLNFAPETNATRTRVRRTRGAK*DVGGSG
Trigger: GCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGT...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGACCACCTGGTGCAGCTaGTGGGTAGCCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALTTWCS*WVATWG
Trigger: CCCCCAGGTGGCTACCCACCAGCTGCACCAGGTGGT...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTCCAGGGACCACCACCTaGTGCAGCTGGTGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQAPGTTT*CSWWVA
Trigger: GGCTACCCACCAGCTGCACCAGGTGGTGGTCCCTGG...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCTAGTTCTCAGCTCATaGCTGCTCCACACCCTTCGG +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSELVLSS*LLHTLR
Trigger: CCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCGTCACCTTGAGTTCATaGCAAGTTGTATATGCCAAG +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVVTLSS*QVVYAK
Trigger: CTTGGCATATACAACTTGCCATGAACTCAAGGTGAC...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGTATCTATCTGCCAGATaGTCACTCTCCCTTACAGGG +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQYLSAR*SLSLTG
Trigger: CCCTGTAAGGGAGAGTGACCATCTGGCAGATAGATA...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCAAGGCCAACAGAAAATaGGCATGGCATGGCATTAAA +
Preference number: 4 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQAKANRK*AWHGIK
Trigger: TTTAATGCCATGCCATGCCCATTTTCTGTTGGCCTT...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCAGTGCAGGCTCGGCTTaGCTCATTTCTAATCATTTC +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGSAGSA*LISNHF
Trigger: GAAATGATTAGAAATGAGCCAAGCCGAGCCTGCACT...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR TCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCCTGAGAGAGAGAGATaGGGAGCCGCTGGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYPERER*GAAGSA
Trigger: GGCACTTCCAGCGGCTCCTCATCTCTCTCTCTCAGG...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAATTCTCTGGTACTCATTaGAAACTGCTACCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEFSGTH*KLLPGG
Trigger: CCCACCTGGTAGCAGTTTTCAATGAGTACCAGAGAA...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp GAGGGGTGGAAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTCTTCCGGTAATCCCCTaGAGTATCTCCCGAGATGTC +
Preference number: 4 (lower is better)
Translates to: EGWKTGLSSRTVNLGAICLPVIP*SISRDV
Trigger: GACATCTCGGGAGATACTTCAGGGGATTACCGGAAG...ACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTTCCACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCTTCCGGTAATCCCCTaGAGTATCTCCCGAGATGTC +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSELPVIP*SISRDV
Trigger: GACATCTCGGGAGATACTTCAGGGGATTACCGGAAG...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCGTAGAAAAGGCATCCTaGGAGAGTTCTAGACCGACC +
Preference number: 4 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSVEKAS*ESSRPT
Trigger: GGTCGGTCTAGAACTCTCTCAGGATGCCTTTTCTAC...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGACAGGCAAAGGGGAATaGTTGCATGAGTCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRTGKGE*LHESEK
Trigger: TTTTTCTGACTCATGCAATCATTCCCCTTTGCCTGT...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTGAGGCACTGGTCTTGTaGCTCTCTGGGTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSEALVL*LSGLSP
Trigger: TGGGGACAACCCAGAGAGTCACAAGACCAGTGCCTC...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTGTGGGTGGAGACCCCTaGTGCAAGGTAAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSVGGDP*CKVSSS
Trigger: GCTAGAGCTTACCTTGCATCAGGGGTCTCCACCCAC...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGGCAAATGTCTGCAGATaGGCTACTCCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLANVCR*ATPWGS
Trigger: GGAGCCCCAGGGAGTAGCTCATCTGCAGACATTTGC...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAACAGGAGCCAAATGGGTaGCATGGGCTTAGTGTAATA +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEQEPNG*HGLSVI
Trigger: TATTACACTAAGCCCATGTCACCCATTTGGCTCCTG...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGATCCCAACCTCCCACTaGCCTTGGAAGGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTIPTSH*PWKAVG
Trigger: ACCTACTGCCTTCCAAGGTCAGTGGGAGGTTGGGAT...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGCATAATAAACAGTGTTaGTCCCAACCTCCCACTGAC +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQHNKQC*SQPPTD
Trigger: GTCAGTGGGAGGTTGGGATCAACACTGTTTATTATG...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTAGCATGGACTGGCCTTaGCTAACATATCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPSMDWP*LTYPGG
Trigger: GCCTCCTGGATATGTTAGTCAAGGCCAGTCCATGCT...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCAAATTCTCTCAGGGCTaGATTCATCTGGTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGKFSQG*IHLVLL
Trigger: TAGAAGCACCAGATGAATTCAGCCCTGAGAGAATTT...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGAAATTCTCTCAGGGCTaGATTCATCTGGTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRKFSQG*IHLVLL
Trigger: TAGAAGCACCAGATGAATTCAGCCCTGAGAGAATTT...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GAGGGGTGGAAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTTACCCAGCCACAGGGTaGGCACTCCAAGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: EGWKTGLSSRTVNLGAICYPATG*ALQGFF
Trigger: AAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTA...ACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTTCCACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAATTAAACCACCACTTTaGCCGTGGGCACCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGIKPPL*PWAPAK
Trigger: CTTTGCAGGTGCCCACGGTCAAAGTGGTGGTTTAAT...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGTGCCAGCCAACCTGGTaGAGCTGGTGGGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALCQPTW*SWWVAT
Trigger: GGTGGCTACCCACCAGCTGCACCAGGTTGGCTGGCA...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR GCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGCTCCTCCTCTCTTGCTaGTCAGAGGCTGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLLLLSC*SEAAQL
Trigger: CAGCTGAGCAGCCTCTGAGCAGCAAGAGAGGAGGAG...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR GCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCGAAAGTAGGATCTGCTaGCGCTGCTTGTTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHAESRIC*RCLLER
Trigger: TCGCTCCAACAAGCAGCGGCAGCAGATCCTACTTTC...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTCCGGTCCTTTGTTCCTaGCCCCCTCATGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAPVLCS*PPHGLV
Trigger: AACAAGGCCATGAGGGGGGCAGGAACAAAGGACCGG...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GCAGAAGTGAGCCACCAGTCACTGTTCAGTCATTGCCACCACAGATCTTCAGCACCGGTCCTTTGTTCCTaGCCCCCTCATGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: AEVSHQSLFSHCHHRSSAPVLCS*PPHGLV
Trigger: AACAAGGCCATGAGGGGGGCAGGAACAAAGGACCGG...TGCTGAAGATCTGTGGTGGCAATGACTGAACAGTGACTGGTGGCTCACTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR GCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACTCCTGGCACTGGTGTTaGCGGCAGGTGGGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYSWHWC*RQVGRS
Trigger: ACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGA...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTGCAAACAGACTTGTATaGCTCTGTCTGGCAATGACT +
Preference number: 4 (lower is better)
Translates to: RLPSQARLPFSPQRGHGAANRLV*LCLAMT
Trigger: AGTCATTGCCAGACAGAGGCATACAAGTCTGTTTGC...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCGTCCTTACGAGTCCCTaGAAACTAGTGTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPVLTSP*KLVYAQ
Trigger: CTGAGCATACACTAGTTTGCAGGGACTCGTAAGGAC...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAACAACCAAGATCCCTTTaGCTTTCAGGTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKQPRSL*LSGVWA
Trigger: GGCCCAGACACCTGAAAGGCAAAGGGATCTTGGTTG...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTCTCCTGCCACCCCCATaGTTGCAGGTGCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQALLPPP*LQVHSL
Trigger: CAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAG...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCGGCAGTAGGTGCCTTTaGCTCTGGGAAGATCATGAG +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHAGSRCL*LWEDHE
Trigger: CTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCC...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGGTCAGAGCTCTTTCTaGTTCAGGACTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEGQSSF*FRTSSA
Trigger: AGCTGATGAAGTCCTGAAGCAGAAAGAGCTCTGACC...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCTCATCATGGGGCCTCTaGCCTGTTAGATGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSSSWGL*PVRCFP
Trigger: AGGAAAGCATCTAACAGGCCAGAGGCCCCATGATGA...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR CCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACACTGCCCCGCATAGGTaGCCACGTTATCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYTAPHR*PRYPAR
Trigger: TCGGGCTGGATAACGTGGCCACCTATGCGGGGCAGT...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCACAGGTTGGGCATGTTaGCTCCTCCAAATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHATGWAC*LLQMSQ
Trigger: CTGGGACATTTGGAGGAGCCAACATGCCCAACCTGT...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTGCCGCCAGGGGGCACTaGTGGGTAGCCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFAARGH*WVASPR
Trigger: CCTGGGGCTGGCTACCCACCAGTGCCCCCTGGCGGC...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGAGGGCATCCTGGAGGGTaGGTTTCCTCCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SFLNFAPETNATRTRVRRGHPGG*VSSWGW
Trigger: CCACCCCCAGGAGGAAACCCACCCTCCAGGATGCCC...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATGCTTCCAAACTGGGTTaGGGGCACAGCGGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYASKLG*GHSGGD
Trigger: GTCACCCCCGCTGTGCCCCCAACCCAGTTTGGAAGC...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTATGTGTCGCTTCGAATaGCCTCTTCCAGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSMCRFE*PLPGSF
Trigger: AAAAGACCCTGGAAGAGGCCATTCGAAGCGACACAT...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTTCCTGGGCATCTCTCTaGGCGAGTGACATGTCCACG +
Preference number: 4 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSSWASL*ASDMST
Trigger: CGTGGACATGTCACTCGCCCAGAGAGATGCCCAGGA...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTAGCCGCATACAGCTCCTaGGCATCTCTCTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLAAYSS*ASLWAS
Trigger: ACTCGCCCAGAGAGATGCCCAGGAGCTGTATGCGGC...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCAGTCACTGTTCAGTCATTGCCACCACAGATCTTCAGCAGAATCTTCCGGTAGCCTTTTCCTGGCACTaGTGTTGCCGGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TSHCSVIATTDLQQNLPVAFSWH*CCRQVG
Trigger: GCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGC...TACCGGAAGATTCTGCTGAAGATCTGTGGTGGCAATGACTGAACAGTGACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR CCA 90 bp GAGCCACCAGTCACTGTTCAGTCATTGCCACCACAGATCTTCAGCAGAATCTTCCCGACCCAGGTCCTGTaGCACACTATACGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EPPVTVQSLPPQIFSRIFPTQVL*HTIRVR
Trigger: CCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG...GAAGATTCTGCTGAAGATCTGTGGTGGCAATGACTGAACAGTGACTGGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR CCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTTCACTGACAGGGAACTaGCTTTGTTCTCGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSSLTGN*LCSRGF
Trigger: GAAACCACGAGAACAAAGCCAGTTCCCTGTCAGTGA...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGTCACTGACAGGGAACTaGCTTTGTTCTCGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQSLTGN*LCSRGF
Trigger: GAAACCACGAGAACAAAGCCAGTTCCCTGTCAGTGA...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATGTTCTGCCTAGGGGCTaGGTCCCACTCCCGCTCGCG +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHVLPRG*VPLPLA
Trigger: CGCGAGCGGGAGTGGGACCCAGCCCCTAGGCAGAAC...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATACGCGAGGGGCGAAATaGGACGTGGGCGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHTRGAK*DVGGSG
Trigger: GCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGT...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGTCTGGGCCTCCTGCCTaGATTTCGGGAACCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLSGPPA*ISGTSL
Trigger: AAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGA...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTGCACCACACCTTCAGTaGACTTCACTGCACCTGCAA +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPAPHLQ*TSLHLQ
Trigger: TTGCAGGTGCAGTGAAGTCCACTGAAGGTGTGGTGC...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTGGTCTTGTGACTCTCTaGGTTGTCCCCATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPGLVTL*VVPILL
Trigger: GAGAAGGATGGGGACAACCCAGAGAGTCACAAGACC...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTCCTGAGGGGAGGCACTaGTCTTGTGACTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAPEGRH*SCDSLG
Trigger: ACCCAGAGAGTCACAAGACCAGTGCCTCCCCTCAGG...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAACTCAACGCAGGAGGTTaGAAAAGGAGTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKLNAGG*KRSGWR
Trigger: TCTCCACCCACTCCTTTTCCAACCTCCTGCGTTGAG...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCATCCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGCCAGGCTGGGAACTTTaGAGTAAACAGGGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: RHPERVLDRPRSCGTLYGPGWEL*SKQGKV
Trigger: TACCTTGCCCTGTTTACTCCAAAGTTCCCAGCCTGG...CCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGGATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCCCAGGCTGGGAACTTTaGAGTAAACAGGGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSPGWEL*SKQGKV
Trigger: TACCTTGCCCTGTTTACTCCAAAGTTCCCAGCCTGG...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGTGCTGGGCACCAGGCTaGGAACTTTGGAGTAAACAG +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSECWAPG*ELWSKQ
Trigger: CTGTTTACTCCAAAGTTCCCAGCCTGGTGCCCAGCA...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCTATCTATCTGCCAGATaGTCACTCTCCCTTACAGGG +
Preference number: 4 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVYLSAR*SLSLTG
Trigger: CCCTGTAAGGGAGAGTGACCATCTGGCAGATAGATA...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCGGAAGGACAGACTTGTaGAATTTCCTATTCCATTTC +
Preference number: 4 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVGRTDL*NFLFHF
Trigger: GAAATGGAATAGGAAATTCCACAAGTCTGTCCTTCC...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTTCCCCAGGCAGTCAATaGTGGCCTGCTCATCCGTCC +
Preference number: 4 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVSPGSQ*WPAHPS
Trigger: GGACGGATGAGCAGGCCATCATTGACTGCCTGGGGA...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACCTTCCAGGGTCTTTTTaGATTCTGCTTTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDLPGSF*ILLCRL
Trigger: GAGCCTACAAAGCAGAATTCAAAAAGACCCTGGAAG...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGAGCACAGAACCGCATTaGACTTGGACTCGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSESTEPH*TWTRLF
Trigger: GAACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCT...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCTTCTCTGGTACTCATTaGAAACTGCTACCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSFSGTH*KLLPGG
Trigger: CCCACCTGGTAGCAGTTTTCAATGAGTACCAGAGAA...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTGCTTATACTCTGATCTaGTGTCCAGGAGGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPAYTLI*CPGGRS
Trigger: AGACCGACCTCCTGGACATCAGATCAGAGTATAAGC...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGGCTTATACTCTGATCTaGTGTCCAGGAGGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSEAYTLI*CPGGRS
Trigger: AGACCGACCTCCTGGACATCAGATCAGAGTATAAGC...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACCATTCCAGAGCTGGCTaGCTCTTAATGTGGAAACAA +
Preference number: 4 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDHSRAG*LLMWKQ
Trigger: TTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATG...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTCATTCCAGAGCTGGCTaGCTCTTAATGTGGAAACAA +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSHSRAG*LLMWKQ
Trigger: TTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATG...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAACATTCCAGAGCTGGCTaGCTCTTAATGTGGAAACAA +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEHSRAG*LLMWKQ
Trigger: TTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATG...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGACTAGTCTTGAACTCCTaGGCTCAAGTGATCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGLVLNS*AQVILS
Trigger: TGAGAGGATCACTTGAGCTCAGGAGTTCAAGACTAG...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACACTCTGACGCAGAGCTaGCGTGTTGACCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYTLTQS*RVDQDL
Trigger: CAGGTCCTGGTCAACACGTCAGCTCTGCGTCAGAGT...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCCAGGAGCCAAATGGGTaGCATGGGCTTAGTGTAATA +
Preference number: 4 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSQEPNG*HGLSVI
Trigger: TATTACACTAAGCCCATGTCACCCATTTGGCTCCTG...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCTCTATCCCAGAAAGATaGCCTGTAAGGTTGCACATC +
Preference number: 4 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVSIPER*PVRLHI
Trigger: GATGTGCAACCTTACAGGTCATCTTTCTGGGATAGA...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTTACCCAGCCACAGGGTaGGCACTCCAAGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TRTCHQSQVDQASSQLMAYPATG*ALQGFF
Trigger: AAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTA...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCTCTCATCACCTGACTaGATTCCAAGCAGACTGTGC +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSELSSPD*IPSRLC
Trigger: GCACAGTCTGCTTGGAATTCAGTCAGGTGATGAGAG...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCATTAAACCACCACTTTaGCCGTGGGCACCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHAIKPPL*PWAPAK
Trigger: CTTTGCAGGTGCCCACGGTCAAAGTGGTGGTTTAAT...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTCAGTCAATGATGGCCTaGTCATCCGTCCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAQSMMA*SSVPKP
Trigger: AGGCTTCGGGACGGATGAGCAGGCCATCATTGACTG...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGAGGATCTGCTGCCGCTaGTTGTTGGAGCGACTCCCC +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALRICCR*LLERLP
Trigger: GGGGAGTCGCTCCAACAAGCAGCGGCAGCAGATCCT...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTAGGATCTGCTGCCGCTaGTTGTTGGAGCGACTCCCC +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQARICCR*LLERLP
Trigger: GGGGAGTCGCTCCAACAAGCAGCGGCAGCAGATCCT...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACAGGAGCCGCTGGAAGTaGCCTGATGTGTCGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYRSRWK*PDVSLR
Trigger: TCGAAGCGACACATCAGGGCACTTCCAGCGGCTCCT...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCCGTGGTACAGCGACTTaGCGTACATCCGCTTATACT +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHARGTAT*RTSAYT
Trigger: AGTATAAGCGGATGTACGGCAAGTCGCTGTACCACG...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCGTGGTACAGCGACTTaGCGTACATCCGCTTATACT +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPRGTAT*RTSAYT
Trigger: AGTATAAGCGGATGTACGGCAAGTCGCTGTACCACG...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTTCCTGGCACTGGTGTTaGCGGCAGGTGGGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVSWHWC*RQVGRS
Trigger: ACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGA...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR GCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGTCCTGGCACTGGTGTTaGCGGCAGGTGGGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALSWHWC*RQVGRS
Trigger: ACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGA...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCGCAAACAGACTTGTATaGCTCTGTCTGGCAATGACT +
Preference number: 4 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVANRLV*LCLAMT
Trigger: AGTCATTGCCAGACAGAGGCATACAAGTCTGTTTGC...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGTCAGCGAGGACACGGTaGTTCACCCACCCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQSARTR*FTHPVA
Trigger: GGCGACTGGGTGGGTGAAGCACCGTGTCCTCGCTGA...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTGTTCTCGTGGTTTCTaGAAGGAAGATGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RLPSQARLPFSPQRGHGACSRGF*KEDGRN
Trigger: ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACA...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGCCGACTATAGGGAATaGACTACAATGCCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEADYRE*TTMPGK
Trigger: TTTACCTGGCATTGTAGTGCATTCCCTATAGTCGGC...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGGTGTTGACCAGGACCTaGCATCAATCTCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSEVLTRT*HQSQVD
Trigger: GTCTACCTGAGATTGATGGCAGGTCCTGGTCAACAC...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTACAAGGGCAAGGGGCCTaGCCTAGCAGAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLQGQGA*PSRGVL
Trigger: AAGAACTCCTCTGCTAGGGCAGGCCCCTTGCCCTTG...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAATGGCAAGTTGTATATaGCAAGCACCCCATCCCATC +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGMASCI*QAPHPI
Trigger: GATGGGATGGGGTGCTTGGCATATACAACTTGCCAT...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTCCAGCCATGCAGGAATaGAAGCCCCATAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAPAMQE*KPHSAR
Trigger: TCTGGCACTATGGGGCTTGCATTCCTGCATGGCTGG...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTACTCAGCTCCAGCCATaGAGGAATGCAAGCCCCATA +
Preference number: 4 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPTQLQP*RNASPI
Trigger: TATGGGGCTTGCATTCCTGCATGGCTGGAGCTGAGT...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTCCCCATGCTTGCAGGTaGACTCCCTGGCTACAGGGT +
Preference number: 4 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVPHACR*TPWLQG
Trigger: ACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGG...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTTGTCTTCTCCAGATCTaGAGCTCCTCTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPCLLQI*SSSQQP
Trigger: TGGCTGCTGAGAGGAGCTGCAGATCTGGAGAAGACA...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTTGACCGTGGGCACCTaGAAAGGTTCATCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHALTVGT*KGSSFS
Trigger: GCTGAAAGATGAACCTTTGCAGGTGCCCACGGTCAA...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTACTGCCCCGCATAGGTaGCCACGTTATCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: QGTGFVLVVSARKMEGMTTAPHR*PRYPAR
Trigger: TCGGGCTGGATAACGTGGCCACCTATGCGGGGCAGT...AGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGACTGCCCCGCATAGGTaGCCACGTTATCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALTAPHR*PRYPAR
Trigger: TCGGGCTGGATAACGTGGCCACCTATGCGGGGCAGT...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTGATATGAGGGCATCCTaGAGGGTGGGTTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQADMRAS*RVGFLL
Trigger: CAGGAGGAAACCCACCCTCCAGGATGCCCTCATATC...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATTCCCGAAGCCTTTCATaGCCTTCCGCAGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYSRSLS*PSAGPR
Trigger: CCGAGGTCCTGCGGAAGGCCATGAAAGGCTTCGGGA...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTGCTGCCGCTGCTTGTTaGAGCGACTCCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFAAAAC*SDSPGS
Trigger: ACTGCCTGGGGAGTCGCTCCAACAAGCAGCGGCAGC...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCATCCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGATGTGTCGCTTCGAATaGCCTCTTCCAGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: RHPERVLDRPRSCGTLYGMCRFE*PLPGSF
Trigger: AAAAGACCCTGGAAGAGGCCATTCGAAGCGACACAT...CCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGGATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGAAAACTGCTACCAGGTaGGCCCGGCTCCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQKTATR*ARLREH
Trigger: GTGCTCCCGGAGCCGGGCCCACCTGGTAGCAGTTTT...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACCTCCGCAAAGAAGGCTaGGGTATTCTTGAGACATTT +
Preference number: 4 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDLRKEG*GILETF
Trigger: AAATGTCTCAAGAATACCCCAGCCTTCTTTGCGGAG...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTCTTTTGGCCTTTTCCTaGCACTGGTGTTGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQALLAFS*HWCCRQ
Trigger: CTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAG...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTAGGTTGGAAAAGGAGTaGGTGGAGACCCCTGATGCA +
Preference number: 4 (lower is better)
Translates to: TRTCHQSQVDQASSQLMARLEKE*VETPDA
Trigger: TGCATCAGGGGTCTCCACCCACTCCTTTTCCAACCT...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTCTAGTTCTCAGCTCATaGCTGCTCCACACCCTTCGG +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQALVLSS*LLHTLR
Trigger: CCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAGGAGAGCAGCAGGGATaGGGCTTCAGCTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRGEQQG*GFSLGL
Trigger: CAAGCCCAAGCTGAAGCCCCATCCCTGCTGCTCTCC...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGAGCCCATACTTAACATaGGTTGGATCTCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQSPYLT*VGSLGS
Trigger: ACTCCCAAGAGATCCAACCCATGTTAAGTATGGGCT...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGAAGCCGGGAGCATCAGTaGTGGTGCCTCGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SFLNFAPETNATRTRVRRSREHQ*WCLGFQ
Trigger: TTGGAAGCCGAGGCACCATCACTGATGCTCCCGGCT...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTTGCCGTAAGCCGTCTTaGAGGAAAGTAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPCRKPS*RKVGSA
Trigger: AGCAGATCCTACTTTCCTTCAAGACGGCTTACGGCA...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTCCGCTGGAAGTGCCCTaGTGTGTCGCTTCGAATGGC +
Preference number: 4 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFPLEVP*CVASNG
Trigger: GCCATTCGAAGCGACACATCAGGGCACTTCCAGCGG...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTTCATCACGGTTTCCCTaGGAGAGAGAGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQASSRFP*EREMRS
Trigger: GCTCCTCATCTCTCTCTCTCAGGGAAACCGTGATGA...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTACCCTCATGGCCTTGTTaGGCCTCTCCGCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLPSWPC*ASPQRR
Trigger: CCTTCTTTGCGGAGAGGCTCAACAAGGCCATGAGGG...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCACAGGCAAAGGGGAATaGTTGCATGAGTCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPTGKGE*LHESEK
Trigger: TTTTTCTGACTCATGCAATCATTCCCCTTTGCCTGT...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTGAGGCACTGGTCTTGTaGCTCTCTGGGTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: QGTGFVLVVSARKMEGMTEALVL*LSGLSP
Trigger: TGGGGACAACCCAGAGAGTCACAAGACCAGTGCCTC...AGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTACTCTGACGCAGAGCTaGCGTGTTGACCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQATLTQS*RVDQDL
Trigger: CAGGTCCTGGTCAACACGTCAGCTCTGCGTCAGAGT...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATTGGATGGGCGATAGCTaGAAGAAAACCTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYWMGDS*KKTWRA
Trigger: GGCCCGCCAGGTTTTCTTTCAGCTATCGCCCATCCA...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTCCTCTGGGAAGATCATaGGGCATTCATGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAPLGRS*GIHAVL
Trigger: GAGGACTGCATGAATGCCTCATGATCTTCCCAGAGG...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATGAGAACCCAGGCCAGTaGCAGCCAACCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHENPGQ*QPTWCS
Trigger: GCTGCACCAGGTTGGCTGGCACTGGCCTGGGTTCTC...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR GCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTACTCGGATGTGCTCATTaGTGCGGGAAGCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLLGCAH*CGKRGS
Trigger: AGATCCTCGCTTCCCGCAGCAATGAGCACATCCGAG...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGGACACACTCACCAGATaGACAGGCTACCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLDTLTR*TGYLLR
Trigger: CCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTC...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTGTTCTCGTGGTTTCTaGAAGGAAGATGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPCSRGF*KEDGRN
Trigger: ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACA...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGCCGACTATAGGGAATaGACTACAATGCCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGADYRE*TTMPGK
Trigger: TTTACCTGGCATTGTAGTGCATTCCCTATAGTCGGC...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTACTCAGCTCCAGCCATaGAGGAATGCAAGCCCCATA +
Preference number: 4 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSTQLQP*RNASPI
Trigger: TATGGGGCTTGCATTCCTGCATGGCTGGAGCTGAGT...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGCCCCATGCTTGCAGGTaGACTCCCTGGCTACAGGGT +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQPHACR*TPWLQG
Trigger: ACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGG...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GAGGGGTGGAAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTATCATGAGGCATTCATaGAGTCCTCCAGCCCATACT +
Preference number: 4 (lower is better)
Translates to: EGWKTGLSSRTVNLGAICIMRHS*SPPAHT
Trigger: AGTATGGGCTGGAGGACTGCATGAATGCCTCATGAT...ACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTTCCACCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGTTGGAAGGCAGTAGGTaGCTTTGCCTCTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTLEGSR*LCLWED
Trigger: ATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCAA...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGTGCCATCTGCTCACCTaGCCTCTGGAGGAACACCTC +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALCHLLT*PLEEHL
Trigger: GAGGTGTTCCTCCAGAGGGCAGGTGAGCAGATGGCA...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTTGCCATCTGCTCACCTaGCCTCTGGAGGAACACCTC +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQACHLLT*PLEEHL
Trigger: GAGGTGTTCCTCCAGAGGGCAGGTGAGCAGATGGCA...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTTGGTGGGTAGCCACCTaGGGGCGGGGGATAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFWWVAT*GRGIAR
Trigger: CCTGGCTATCCCCCGCCCCCAGGTGGCTACCCACCA...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGAAGACCCCGGGTATCCTaGGTAGCTCGGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRRPRVS*VARHWL
Trigger: CAGCCAGTGCCGAGCTACCCAGGATACCCGGGGTCT...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGGAGATGAGGAGCCGCTaGAAGTGCCCTGATGTGTCG +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALEMRSR*KCPDVS
Trigger: CGACACATCAGGGCACTTCCAGCGGCTCCTCATCTC...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTGAGATGAGGAGCCGCTaGAAGTGCCCTGATGTGTCG +
Preference number: 4 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVEMRSR*KCPDVS
Trigger: CGACACATCAGGGCACTTCCAGCGGCTCCTCATCTC...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATAAAACTGCTACCAGGTaGGCCCGGCTCCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHKTATR*ARLREH
Trigger: GTGCTCCCGGAGCCGGGCCCACCTGGTAGCAGTTTT...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGAGCCTTTTCCTGGCACTaGTGTTGCCGGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRAFSWH*CCRQVG
Trigger: GCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGC...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCTGGCTTTGTTCTCGTaGTTTCTGCAAGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPLALFS*FLQGRW
Trigger: CCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAG...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGTGTGGAAACAAGTTTTaGCTACAGACATTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRCGNKF*LQTFRF
Trigger: AAACCTGAATGTCTGTAGCCAAAACTTGTTTCCACA...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTGCACCACACCTTCAGTaGACTTCACTGCACCTGCAA +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAAPHLQ*TSLHLQ
Trigger: TTGCAGGTGCAGTGAAGTCCACTGAAGGTGTGGTGC...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATACCCTTCTTCCCTCCTaGGACCTGGGTGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYTLLPS*DLGEGL
Trigger: CAGTCCTTCACCCAGGTCCCAGGAGGGAAGAAGGGT...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATACCCTTCTTCCCTCCTaGGACCTGGGTGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNTLLPS*DLGEGL
Trigger: CAGTCCTTCACCCAGGTCCCAGGAGGGAAGAAGGGT...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTTCAGAAACTCTCTTATaGATTCTCTTCCCTCACACC +
Preference number: 4 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSSETLL*ILFPHT
Trigger: GGTGTGAGGGAAGAGAATCCATAAGAGAGTTTCTGA...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAAAGCATCCTGTGTAGCTaGGATTACAGGAATGTGCCA +
Preference number: 4 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKSILCS*DYRNVP
Trigger: TGGCACATTCCTGTAATCCCAGCTACACAGGATGCT...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGATGCAGGTGCACTCCCTaGCTACAGGGTCAGCGGCTT +
Preference number: 4 (lower is better)
Translates to: SFLNFAPETNATRTRVRRCRCTP*LQGQRL
Trigger: AAGCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCA...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTAGGTGCCTTTGCCTCTaGGAAGATCATGAGGCATTC +
Preference number: 4 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPRCLCL*EDHEAF
Trigger: GAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCT...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATTGGGTATGGCGGATATaGGGGCATCCTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHWVWRI*GHPGGW
Trigger: CCACCCTCCAGGATGCCCTCATATCCGCCATACCCA...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATCCGCTGGAAGTGCCCTaGTGTGTCGCTTCGAATGGC +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHPLEVP*CVASNG
Trigger: GCCATTCGAAGCGACACATCAGGGCACTTCCAGCGG...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATCCTGAGAGAGAGAGATaGGGAGCCGCTGGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHPERER*GAAGSA
Trigger: GGCACTTCCAGCGGCTCCTCATCTCTCTCTCTCAGG...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACCTGAGAGAGAGAGATaGGGAGCCGCTGGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRPERER*GAAGSA
Trigger: GGCACTTCCAGCGGCTCCTCATCTCTCTCTCTCAGG...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTAGCACAGAACCGCATTaGACTTGGACTCGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQASTEPH*TWTRLF
Trigger: GAACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCT...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACGCTGCGAGACACCATaGTGCGAATCAGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRRCETP*CESGSG
Trigger: ACCGGACCCTGATTCGCATCATGGTGTCTCGCAGCG...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp GCCACCAGTCACTGTTCAGTCATTGCCACCACAGATCTTCAGCAGAATCTTCCGGCTTATACTCTGATCTaGTGTCCAGGAGGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: ATSHCSVIATTDLQQNLPAYTLI*CPGGRS
Trigger: AGACCGACCTCCTGGACATCAGATCAGAGTATAAGC...CGGAAGATTCTGCTGAAGATCTGTGGTGGCAATGACTGAACAGTGACTGGTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR TCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTACTTCCGGTAATCCCCTaGAGTATCTCCCGAGATGTC +
Preference number: 4 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLLPVIP*SISRDV
Trigger: GACATCTCGGGAGATACTTCAGGGGATTACCGGAAG...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCTAGTCTTGAACTCCTaGGCTCAAGTGATCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTLVLNS*AQVILS
Trigger: TGAGAGGATCACTTGAGCTCAGGAGTTCAAGACTAG...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTAGGACCCAGCAGGCTTaGTCTAGCCTAGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQARTQQA*SSLVSL
Trigger: CAGAGAGACTAGGCTAGATCAAGCCTGCTGGGTCCT...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTAGCAGAGCTGACGTGTTaGCCAGGACCTGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLAELTC*PGPAIN
Trigger: ATTGATGGCAGGTCCTGGTCAACACGTCAGCTCTGC...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATATCCCAACCTCCCACTaGCCTTGGAAGGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNIPTSH*PWKAVG
Trigger: ACCTACTGCCTTCCAAGGTCAGTGGGAGGTTGGGAT...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACTACCCAGCCACAGGGTaGGCACTCCAAGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYYPATG*ALQGFF
Trigger: AAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTA...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGCAGGGCAGTTATACCTTATACCTGGTGGGCTTaGCTGACTCCTTTACTGACA +
Preference number: 4 (lower is better)
Translates to: MPIRAQEHLYSVSRAVIPYTWWA*LTPLLT
Trigger: TGTCAGTAAAGGAGTCAGTCAAGCCCACCAGGTATA...AGGTATAACTGCCCTGCTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTCTCTGGCCTGTTAGATaGTTTCCTCTACATGGCAGC +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQALWPVR*FPLHGS
Trigger: GCTGCCATGTAGAGGAAAGCATCTAACAGGCCAGAG...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR GCA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGACTCGGCACTGGCTGCTaGTGCCCAGGGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGLGTGC*CPGSGT
Trigger: AGTGCCACTCCCTGGGCAGCAGCAGCCAGTGCCGAG...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTCTCGGCACTGGCTGCTaGTGCCCAGGGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFLGTGC*CPGSGT
Trigger: AGTGCCACTCCCTGGGCAGCAGCAGCCAGTGCCGAG...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGAAGGAAAGTAGGATCTaGTGCCGCTGCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLKESRI*CRCLLE
Trigger: CTCCAACAAGCAGCGGCAGCAGATCCTACTTTCCTT...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTCTCGGATGTGCTCATTaGTGCGGGAAGCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: QGTGFVLVVSARKMEGMTLGCAH*CGKRGS
Trigger: AGATCCTCGCTTCCCGCAGCAATGAGCACATCCGAG...AGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGACATGTCCACGTTTGTaGTTTCATCACGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSETCPRL*FHHGFP
Trigger: AGGGAAACCGTGATGAAAGCACAAACGTGGACATGT...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATTCACCACGGCCAGCATaGCCTCCTCCAGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHSPRPA*PPPGPR
Trigger: CCGGGGACCTGGAGGAGGGCATGCTGGCCGTGGTGA...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAAGCAAACAGACTTGTATaGCTCTGTCTGGCAATGACT +
Preference number: 4 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKANRLV*LCLAMT
Trigger: AGTCATTGCCAGACAGAGGCATACAAGTCTGTTTGC...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCCACCAGAAATGTGTATaGAGCAAACAGACTTGTATG +
Preference number: 4 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPHQKCV*SKQTCM
Trigger: CATACAAGTCTGTTTGCTGCATACACATTTCTGGTG...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAACACCAGAAATGTGTATaGAGCAAACAGACTTGTATG +
Preference number: 4 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEHQKCV*SKQTCM
Trigger: CATACAAGTCTGTTTGCTGCATACACATTTCTGGTG...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTAGACACACTCACCAGATaGACAGGCTACCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLDTLTR*TGYLLR
Trigger: CCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTC...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTTTCAGTGGACTTCACTaGACCTGCAACCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: TRTCHQSQVDQASSQLMAFSGLH*TCNQPR
Trigger: TCTTGGTTGGTTGCAGGTGCAGTGAAGTCCACTGAA...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATCCTCACCTCCCAAAGTaGTGGGATTACAGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNPHLPK*WDYSRE
Trigger: CTCACGGCTGTAATCCCAGCACTTTGGGAGGTGAGG...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGGTGCAATATTGCCTaGTGGGCACCAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVRCNIA*WAPGWE
Trigger: TTCCCAGCCTGGTGCCCAGCAGGCAATATTGCACCT...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGACCAGCCATGCAGGAATaGAAGCCCCATAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRPAMQE*KPHSAR
Trigger: TCTGGCACTATGGGGCTTGCATTCCTGCATGGCTGG...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGAACTGCCCCGCATAGGTaGCCACGTTATCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRTAPHR*PRYPAR
Trigger: TCGGGCTGGATAACGTGGCCACCTATGCGGGGCAGT...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGGTTTCCTCCTGGGGGTaGATACATCCCATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALVSSWG*IHPIGR
Trigger: CCTCCCTATGGGATGTATCCACCCCCAGGAGGAAAC...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTGGGTGGGTTTCCTCCTaGGGGTGGATACATCCCATA +
Preference number: 4 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVGWVSS*GWIHPI
Trigger: TATGGGATGTATCCACCCCCAGGAGGAAACCCACCC...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAGGGTGGGTTTCCTCCTaGGGGTGGATACATCCCATA +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRGWVSS*GWIHPI
Trigger: TATGGGATGTATCCACCCCCAGGAGGAAACCCACCC...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTTGGGTAGCTCGGCACTaGCTGCTGCTGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFWVARH*LLLPRE
Trigger: CTCCCTGGGCAGCAGCAGCCAGTGCCGAGCTACCCA...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGTGTGGAAACAAGTTTTaGCTACAGACATTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQCGNKF*LQTFRF
Trigger: AAACCTGAATGTCTGTAGCCAAAACTTGTTTCCACA...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTGTGGAAACAAGTTTTaGCTACAGACATTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RLPSQARLPFSPQRGHGACGNKF*LQTFRF
Trigger: AAACCTGAATGTCTGTAGCCAAAACTTGTTTCCACA...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GAGGGGTGGAAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTAGACCATTCCAGAGCTaGCTGACTCTTAATGTGGAA +
Preference number: 4 (lower is better)
Translates to: EGWKTGLSSRTVNLGAICRPFQS*LTLNVE
Trigger: TTCCACATTAAGAGTCAGCCAGCTCTGGAATGGTCT...ACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTTCCACCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTACTCGCTGAGTCACTCTaGCCTGGATATCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLLAESL*PGYPPW
Trigger: CCAAGGTGGATATCCAGGCCAGAGTGACTCAGCGAG...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATAGGTCCAATAATCCCTaGCCACGGGGACTCCGGACG +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHRSNNP*PRGLRT
Trigger: CGTCCGGAGTCCCCGTGGCCAGGGATTATTGGACCT...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438331.5
3UTR CAA 72 bp GCAAGCTCCCCTGATGATCCTGATACACACTCAGGCTaGAAAACCACCACTTTAGGACCATCTACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ASSPDDPDTHSG*KTTTLGPSTQP
Trigger: TGGCTGGGTAGATGGTCCTAAAGTGGTGGTTTTCAAGCCTGAGTGTGTATCAGGATCATCAGGGGAGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGAGAGATAGTCCTGGTTaGACTGCCCCGCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQRDSPG*TAPHRW
Trigger: CCACCTATGCGGGGCAGTTCAACCAGGACTATCTCT...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACTGCCGTAAGCCGTCTTaGAGGAAAGTAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYCRKPS*RKVGSA
Trigger: AGCAGATCCTACTTTCCTTCAAGACGGCTTACGGCA...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCTTCCAGGGTCTTTTTaGATTCTGCTTTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTLPGSF*ILLCRL
Trigger: GAGCCTACAAAGCAGAATTCAAAAAGACCCTGGAAG...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAATCTCTCTGGGCGAGTaGCATGTCCACGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRISLGE*HVHVCA
Trigger: AGCACAAACGTGGACATGTCACTCGCCCAGAGAGAT...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTATCTCTCTGGGCGAGTaGCATGTCCACGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVISLGE*HVHVCA
Trigger: AGCACAAACGTGGACATGTCACTCGCCCAGAGAGAT...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAGGCTGGGGTATTCTTaGGACATTTCACCACGGCCA +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRRLGYS*DISPRP
Trigger: TGGCCGTGGTGAAATGTCTCAAGAATACCCCAGCCT...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTAGCTTATACTCTGATCTaGTGTCCAGGAGGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLAYTLI*CPGGRS
Trigger: AGACCGACCTCCTGGACATCAGATCAGAGTATAAGC...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCACAGGCAAAGGGGAATaGTTGCATGAGTCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: NKARDTLTRCTGYLLRHATGKGE*LHESEK
Trigger: TTTTTCTGACTCATGCAATCATTCCCCTTTGCCTGT...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGGCATCCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGAATTACATGACGAAATaGAGCCAAGTCTTAGCCACA +
Preference number: 4 (lower is better)
Translates to: RHPERVLDRPRSCGTLYGNYMTK*SQVLAT
Trigger: TGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATT...CCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGGATGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGGCAGAGCTGACGTGTTaGCCAGGACCTGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQAELTC*PGPAIN
Trigger: ATTGATGGCAGGTCCTGGTCAACACGTCAGCTCTGC...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGATGGATGGGCGATAGCTaGAAGAAAACCTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRWMGDS*KKTWRA
Trigger: GGCCCGCCAGGTTTTCTTTCAGCTATCGCCCATCCA...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCATAATAAACAGTGTTaGTCCCAACCTCCCACTGAC +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTHNKQC*SQPPTD
Trigger: GTCAGTGGGAGGTTGGGATCAACACTGTTTATTATG...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGAAATTCTCTCAGGGCTaGATTCATCTGGTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSEKFSQG*IHLVLL
Trigger: TAGAAGCACCAGATGAATTCAGCCCTGAGAGAATTT...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGACAGTCAATGATGGCCTaGTCATCCGTCCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SFLNFAPETNATRTRVRRQSMMA*SSVPKP
Trigger: AGGCTTCGGGACGGATGAGCAGGCCATCATTGACTG...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTTTTAATTCTCGGATGTaGTCATTGCTGCGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAFNSRM*SLLREA
Trigger: CGCTTCCCGCAGCAATGAGCACATCCGAGAATTAAA...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTACATGTCCACGTTTGTaGTTTCATCACGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TRTCHQSQVDQASSQLMATCPRL*FHHGFP
Trigger: AGGGAAACCGTGATGAAAGCACAAACGTGGACATGT...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGTTCAGTGGACTTCACTaGACCTGCAACCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLFSGLH*TCNQPR
Trigger: TCTTGGTTGGTTGCAGGTGCAGTGAAGTCCACTGAA...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAACCTGGGTGAAGGACTaGATTCTTCGCACCACACCT +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRTWVKD*ILRTTP
Trigger: AGGTGTGGTGCGAAGAATGCAGTCCTTCACCCAGGT...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTATTCTCAGCTCATGGCTaGTCCACACCCTTCGGATGT +
Preference number: 4 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLFSAHG*STPFGC
Trigger: ACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAA...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATCAAGGGCAAGGGGCCTaGCCTAGCAGAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHQGQGA*PSRGVL
Trigger: AAGAACTCCTCTGCTAGGGCAGGCCCCTTGCCCTTG...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTCAGCTCTGTGGCTCCTaGCACCCCCATGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFQLCGS*HPHACR
Trigger: CCTGCAAGCATGGGGGTGGCAGGAGCCACAGAGCTG...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATTGTCTTCTCCAGATCTaGAGCTCCTCTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNCLLQI*SSSQQP
Trigger: TGGCTGCTGAGAGGAGCTGCAGATCTGGAGAAGACA...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTCTGACCGCAGGAACTaGTCTTTAGCAAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QGTGFVLVVSARKMEGMTSDRRN*SLASSP
Trigger: AGGGGAGCTTGCTAAAGAGCAGTTCCTGCGGTCAGA...AGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTGAACACCTCTACTTTTaGGGTGTTCTCTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAEHLYF*GVLCVS
Trigger: GCTCACACAGAGAACACCGCAAAAGTAGAGGTGTTC...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGAGGGTGGGTTTCCTCCTaGGGGTGGATACATCCCATA +
Preference number: 4 (lower is better)
Translates to: SFLNFAPETNATRTRVRRGWVSS*GWIHPI
Trigger: TATGGGATGTATCCACCCCCAGGAGGAAACCCACCC...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTAATGTCAAAGAGGACTaGGGTCTTCATCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: TRTCHQSQVDQASSQLMANVKED*GLHQSQ
Trigger: TTGGCTCTGATGAAGACCCCAGTCCTCTTTGACATT...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATGAGATGAGGAGCCGCTaGAAGTGCCCTGATGTGTCG +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHEMRSR*KCPDVS
Trigger: CGACACATCAGGGCACTTCCAGCGGCTCCTCATCTC...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTAAAACTGCTACCAGGTaGGCCCGGCTCCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFKTATR*ARLREH
Trigger: GTGCTCCCGGAGCCGGGCCCACCTGGTAGCAGTTTT...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGACTTTTGGCCTTTTCCTaGCACTGGTGTTGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SFLNFAPETNATRTRVRRLLAFS*HWCCRQ
Trigger: CTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAG...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATACGGGTCAGGAGGGGTaGAAGACAGGCCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHTGQEG*KTGLSS
Trigger: AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGT...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAATCAGAAACTCTCTTATaGATTCTCTTCCCTCACACC +
Preference number: 4 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKSETLL*ILFPHT
Trigger: GGTGTGAGGGAAGAGAATCCATAAGAGAGTTTCTGA...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GAGGGGTGGAAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGTCACCTTGAGTTCATaGCAAGTTGTATATGCCAAG +
Preference number: 4 (lower is better)
Translates to: EGWKTGLSSRTVNLGAICVTLSS*QVVYAK
Trigger: CTTGGCATATACAACTTGCCATGAACTCAAGGTGAC...ACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTTCCACCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GCAGAAGTGAGCCACCAGTCACTGTTCAGTCATTGCCACCACAGATCTTCAGCAATGTCCATAGCTTGCTaGCATGCAGGAGATACTCGA +
Preference number: 4 (lower is better)
Translates to: AEVSHQSLFSHCHHRSSAMSIAC*HAGDTR
Trigger: TCGAGTATCTCCTGCATGCCAGCAAGCTATGGACAT...TGCTGAAGATCTGTGGTGGCAATGACTGAACAGTGACTGGTGGCTCACTTCTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR TCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTTGCCGTAAGCCGTCTTaGAGGAAAGTAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQACRKPS*RKVGSA
Trigger: AGCAGATCCTACTTTCCTTCAAGACGGCTTACGGCA...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCAGATTTCAGATCTTTaGTCAAATCCTTGCCGTAAG +
Preference number: 4 (lower is better)
Translates to: TKLVTHSPDAQATFSGTPQISDL*SNPCRK
Trigger: CTTACGGCAAGGATTTGATCAAAGATCTGAAATCTG...AGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATCAGTGCCAACCCCCTTaGTGGCTTCCTTTATCTCAT +
Preference number: 4 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYQCQPP*WLPLSH
Trigger: ATGAGATAAAGGAAGCCATCAAGGGGGTTGGCACTG...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTTCATCACGGTTTCCCTaGGAGAGAGAGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFSSRFP*EREMRS
Trigger: GCTCCTCATCTCTCTCTCTCAGGGAAACCGTGATGA...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATAGCACAGAACCGCATTaGACTTGGACTCGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNSTEPH*TWTRLF
Trigger: GAACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCT...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTAGCACAGAACCGCATTaGACTTGGACTCGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQASTEPH*TWTRLF
Trigger: GAACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCT...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGAAGGCTGGGGTATTCTTaGGACATTTCACCACGGCCA +
Preference number: 4 (lower is better)
Translates to: SFLNFAPETNATRTRVRRRLGYS*DISPRP
Trigger: TGGCCGTGGTGAAATGTCTCAAGAATACCCCAGCCT...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGACGCTGCGAGACACCATaGTGCGAATCAGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGRCETP*CESGSG
Trigger: ACCGGACCCTGATTCGCATCATGGTGTCTCGCAGCG...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTCGCTGCGAGACACCATaGTGCGAATCAGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFRCETP*CESGSG
Trigger: ACCGGACCCTGATTCGCATCATGGTGTCTCGCAGCG...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGACATCCGCTTATACTCTaGTCTGATGTCCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRHPLIL*SDVQEV
Trigger: GACCTCCTGGACATCAGATCAGAGTATAAGCGGATG...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTCATCCGCTTATACTCTaGTCTGATGTCCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVHPLIL*SDVQEV
Trigger: GACCTCCTGGACATCAGATCAGAGTATAAGCGGATG...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp ACCAGTCACTGTTCAGTCATTGCCACCACAGATCTTCAGCAGAATCTTCCGGTACATCCGCTTATACTCTaGTCTGATGTCCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TSHCSVIATTDLQQNLPVHPLIL*SDVQEV
Trigger: GACCTCCTGGACATCAGATCAGAGTATAAGCGGATG...TACCGGAAGATTCTGCTGAAGATCTGTGGTGGCAATGACTGAACAGTGACTGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR TCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGTAGAAAAGGCATCCTaGGAGAGTTCTAGACCGACC +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNVEKAS*ESSRPT
Trigger: GGTCGGTCTAGAACTCTCTCAGGATGCCTTTTCTAC...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGTCTAGCTTCTGGACATaGCACCATAATTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSESSFWT*HHNSQK
Trigger: TTTCTGAGAATTATGGTGTCATGTCCAGAAGCTAGA...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTTGGGTCTCGAACTCCTaGCCTCAGGTGATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFWVSNS*PQVICP
Trigger: CGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCCA...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTCCTCTGGGAAGATCATaGGGCATTCATGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFPLGRS*GIHAVL
Trigger: GAGGACTGCATGAATGCCTCATGATCTTCCCAGAGG...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTTCTATCCCAGAAAGATaGCCTGTAAGGTTGCACATC +
Preference number: 4 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSSIPER*PVRLHI
Trigger: GATGTGCAACCTTACAGGTCATCTTTCTGGGATAGA...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGAGCATGGACTGGCCTTaGCTAACATATCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQSMDWP*LTYPGG
Trigger: GCCTCCTGGATATGTTAGTCAAGGCCAGTCCATGCT...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTTCATCTCTCATCACCTaGCTGAATTCCAAGCAGACT +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQASSLIT*LNSKQT
Trigger: AGTCTGCTTGGAATTCAGTCAGGTGATGAGAGATGA...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTAGTCCAGGTTGTGGACTaGGTAATGATGTCCCTATCC +
Preference number: 4 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLVQVVD*VMMSLS
Trigger: GGATAGGGACATCATTACTCAGTCCACAACCTGGAC...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATAAGGAAAGTAGGATCTaGTGCCGCTGCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNKESRI*CRCLLE
Trigger: CTCCAACAAGCAGCGGCAGCAGATCCTACTTTCCTT...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTCGTGGTACAGCGACTTaGCGTACATCCGCTTATACT +
Preference number: 4 (lower is better)
Translates to: QGTGFVLVVSARKMEGMTRGTAT*RTSAYT
Trigger: AGTATAAGCGGATGTACGGCAAGTCGCTGTACCACG...AGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CATTGCCACCACAGATCTTCAGCAGAATCTTCCGGTAATCCCCTGAAGTATCTCCGTGGTACAGCGACTTaGCGTACATCCGCTTATACT +
Preference number: 4 (lower is better)
Translates to: HCHHRSSAESSGNPLKYLRGTAT*RTSAYT
Trigger: AGTATAAGCGGATGTACGGCAAGTCGCTGTACCACG...GAGATACTTCAGGGGATTACCGGAAGATTCTGCTGAAGATCTGTGGTGGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR GCA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTTGTTCTCGTGGTTTCTaGAAGGAAGATGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: TRTCHQSQVDQASSQLMACSRGF*KEDGRN
Trigger: ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACA...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTGGTGTCTGGGCCTCCTaGCTGGATTTCGGGAACCTC +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFGVWAS*LDFGNL
Trigger: GAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACC...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAGGACTTCACTGCACCTaGAACCAACCAAGATCCCTT +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRGLHCT*NQPRSL
Trigger: AAGGGATCTTGGTTGGTTGCAGGTGCAGTGAAGTCC...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGACCTGGGTGAAGGACTaGATTCTTCGCACCACACCT +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQTWVKD*ILRTTP
Trigger: AGGTGTGGTGCGAAGAATGCAGTCCTTCACCCAGGT...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGGCCGACTATAGGGAATaGACTACAATGCCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLADYRE*TTMPGK
Trigger: TTTACCTGGCATTGTAGTGCATTCCCTATAGTCGGC...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATAGGTGCAATATTGCCTaGTGGGCACCAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHRCNIA*WAPGWE
Trigger: TTCCCAGCCTGGTGCCCAGCAGGCAATATTGCACCT...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTTCAAACCCAAAGGCCTaGAGGAGCCAAATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFSNPKA*RSQMGD
Trigger: GTCACCCATTTGGCTCCTGCAGGCCTTTGGGTTTGA...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTACAGCAGGTTACAGATaGAGTTTCCCAGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: QGTGFVLVVSARKMEGMTTAGYR*SFPVPT
Trigger: TGTGGGGACTGGGAAACTGCATCTGTAACCTGCTGT...AGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATACAGCAGGTTACAGATaGAGTTTCCCAGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYTAGYR*SFPVPT
Trigger: TGTGGGGACTGGGAAACTGCATCTGTAACCTGCTGT...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTACAGCAGGTTACAGATaGAGTTTCCCAGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQATAGYR*SFPVPT
Trigger: TGTGGGGACTGGGAAACTGCATCTGTAACCTGCTGT...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCAGGTATTCACCTGATTaGTGTAAACTTTCAATTCGT +
Preference number: 4 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVRYSPD*CKLSIR
Trigger: ACGAATTGAAAGTTTACAGCAATCAGGTGAATACCT...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTGGCAGTGGCAGGATCTaGATGGCAGGATTTCTACTA +
Preference number: 4 (lower is better)
Translates to: QGTGFVLVVSARKMEGMTGSGRI*MAGFLL
Trigger: TAGTAGAAATCCTGCCATCCAGATCCTGCCACTGCC...AGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR CCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGAATGTCCCAGACATGTTaGCCGCCATTCCCGAGAGAT +
Preference number: 4 (lower is better)
Translates to: SFLNFAPETNATRTRVRRMSQTC*PPFPRD
Trigger: ATCTCTCGGGAATGGCGGCCAACATGTCTGGGACAT...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGAGGGTGGGTTTCCTCCTaGGGGTGGATACATCCCATA +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRGWVSS*GWIHPI
Trigger: TATGGGATGTATCCACCCCCAGGAGGAAACCCACCC...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGCTCCGCAAAGAAGGCTaGGGTATTCTTGAGACATTT +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLLRKEG*GILETF
Trigger: AAATGTCTCAAGAATACCCCAGCCTTCTTTGCGGAG...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGGGTCTTGTGACTCTCTaGGTTGTCCCCATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQGLVTL*VVPILL
Trigger: GAGAAGGATGGGGACAACCCAGAGAGTCACAAGACC...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACAGCATCCTGTGTAGCTaGGATTACAGGAATGTGCCA +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYSILCS*DYRNVP
Trigger: TGGCACATTCCTGTAATCCCAGCTACACAGGATGCT...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTCAGGTTGAAGTGCAATaGTGTGATCTCAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAQVEVQ*CDLSSL
Trigger: TAGTGAGCTGAGATCACACCATTGCACTTCAACCTG...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTCCAGGCTGGGAACTTTaGAGTAAACAGGGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQAPGWEL*SKQGKV
Trigger: TACCTTGCCCTGTTTACTCCAAAGTTCCCAGCCTGG...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CAA 72 bp ATAATAAACAGTGTTGATCCCAACCTCCCACTGACCTaGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: IINSVDPNLPLT*EGSRCLCLWED
Trigger: ATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCAAGGTCAGTGGGAGGTTGGGATCAACACTGTTTATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCAGATTTCAGATCTTTaGTCAAATCCTTGCCGTAAG +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTQISDL*SNPCRK
Trigger: CTTACGGCAAGGATTTGATCAAAGATCTGAAATCTG...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTTTCTCTGGTACTCATTaGAAACTGCTACCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQAFSGTH*KLLPGG
Trigger: CCCACCTGGTAGCAGTTTTCAATGAGTACCAGAGAA...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGATTCTCTGGTACTCATTaGAAACTGCTACCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRFSGTH*KLLPGG
Trigger: CCCACCTGGTAGCAGTTTTCAATGAGTACCAGAGAA...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGCATCCGCTTATACTCTaGTCTGATGTCCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQHPLIL*SDVQEV
Trigger: GACCTCCTGGACATCAGATCAGAGTATAAGCGGATG...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGAATTACATGACGAAATaGAGCCAAGTCTTAGCCACA +
Preference number: 4 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTNYMTK*SQVLAT
Trigger: TGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATT...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTACATTCCAGAGCTGGCTaGCTCTTAATGTGGAAACAA +
Preference number: 4 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLHSRAG*LLMWKQ
Trigger: TTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATG...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGATGGATGGGCGATAGCTaGAAGAAAACCTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGWMGDS*KKTWRA
Trigger: GGCCCGCCAGGTTTTCTTTCAGCTATCGCCCATCCA...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATTATACCTGGTGGGCTTaGCTGACTCCTTTACTGACA +
Preference number: 4 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYYTWWA*LTPLLT
Trigger: TGTCAGTAAAGGAGTCAGTCAAGCCCACCAGGTATA...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATCAACAAATCAGGGGCTaGGCTGAGATCAGAATAAGG +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNQQIRG*AEIRIR
Trigger: CCTTATTCTGATCTCAGCTCAGCCCCTGATTTGTTG...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTACAACAAATCAGGGGCTaGGCTGAGATCAGAATAAGG +
Preference number: 4 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLQQIRG*AEIRIR
Trigger: CCTTATTCTGATCTCAGCTCAGCCCCTGATTTGTTG...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGAGAAAGTAGGATCTGCTaGCGCTGCTTGTTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRESRIC*RCLLER
Trigger: TCGCTCCAACAAGCAGCGGCAGCAGATCCTACTTTC...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGAGGATGTGCTCATTGCTaGGGGAAGCGAGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRGCAHC*GKRGSQ
Trigger: TTGAGATCCTCGCTTCCCGCAGCAATGAGCACATCC...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGCGTGGTACAGCGACTTaGCGTACATCCGCTTATACT +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQRGTAT*RTSAYT
Trigger: AGTATAAGCGGATGTACGGCAAGTCGCTGTACCACG...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTGGGACCACCACCTGGTaGAGCTGGTGGGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFGTTTW*SWWVAT
Trigger: GGTGGCTACCCACCAGCTGCACCAGGTGGTGGTCCC...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGTCCTTACGAGTCCCTaGAAACTAGTGTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNVLTSP*KLVYAQ
Trigger: CTGAGCATACACTAGTTTGCAGGGACTCGTAAGGAC...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGGGACTTCACTGCACCTaGAACCAACCAAGATCCCTT +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQGLHCT*NQPRSL
Trigger: AAGGGATCTTGGTTGGTTGCAGGTGCAGTGAAGTCC...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTATCATGAGGCATTCATaGAGTCCTCCAGCCCATACT +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQAIMRHS*SPPAHT
Trigger: AGTATGGGCTGGAGGACTGCATGAATGCCTCATGAT...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGATTGGAAGGCAGTAGGTaGCTTTGCCTCTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SFLNFAPETNATRTRVRRLEGSR*LCLWED
Trigger: ATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCAA...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGGAACACCTCTACTTTTaGGGTGTTCTCTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALEHLYF*GVLCVS
Trigger: GCTCACACAGAGAACACCGCAAAAGTAGAGGTGTTC...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCAGGTATTCACCTGATTaGTGTAAACTTTCAATTCGT +
Preference number: 4 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSRYSPD*CKLSIR
Trigger: ACGAATTGAAAGTTTACAGCAATCAGGTGAATACCT...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTCAGATGTCCATAGCTTaGTGGCATGCAGGAGATACT +
Preference number: 4 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVQMSIA*WHAGDT
Trigger: AGTATCTCCTGCATGCCAGCAAGCTATGGACATCTG...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR CCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTCCCCAGGGTACAGGTTaGGCATGTTGGCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFPQGTG*ACWLLQ
Trigger: TTGGAGGAGCCAACATGCCCAACCTGTACCCTGGGG...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTACTCCGCAAAGAAGGCTaGGGTATTCTTGAGACATTT +
Preference number: 4 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLLRKEG*GILETF
Trigger: AAATGTCTCAAGAATACCCCAGCCTTCTTTGCGGAG...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATCCGACCCAGGTCCTGTaGCACACTATACGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHPTQVL*HTIRVR
Trigger: CCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGATTCCCTCCTGGGACCTaGGTGAAGGACTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRFPPGT*VKDCIL
Trigger: AAGAATGCAGTCCTTCACCCAGGTCCCAGGAGGGAA...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATCTCAACGCAGGAGGTTaGAAAAGGAGTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHLNAGG*KRSGWR
Trigger: TCTCCACCCACTCCTTTTCCAACCTCCTGCGTTGAG...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTACGGCCTCAATTTCTTaGGCTCTAAGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVTASIS*ALRIFL
Trigger: CAGGAAGATCCTTAGAGCCCAAGAAATTGAGGCCGT...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGAAGAGATAGTCCTGGTTaGACTGCCCCGCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGRDSPG*TAPHRW
Trigger: CCACCTATGCGGGGCAGTTCAACCAGGACTATCTCT...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGATGCCGTAAGCCGTCTTaGAGGAAAGTAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRCRKPS*RKVGSA
Trigger: AGCAGATCCTACTTTCCTTCAAGACGGCTTACGGCA...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTCAGATTTCAGATCTTTaGTCAAATCCTTGCCGTAAG +
Preference number: 4 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAQISDL*SNPCRK
Trigger: CTTACGGCAAGGATTTGATCAAAGATCTGAAATCTG...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGACTTCCAGGGTCTTTTTaGATTCTGCTTTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRLPGSF*ILLCRL
Trigger: GAGCCTACAAAGCAGAATTCAAAAAGACCCTGGAAG...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTATCCCAACCTCCCACTaGCCTTGGAAGGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFIPTSH*PWKAVG
Trigger: ACCTACTGCCTTCCAAGGTCAGTGGGAGGTTGGGAT...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTACATAATAAACAGTGTTaGTCCCAACCTCCCACTGAC +
Preference number: 4 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLHNKQC*SQPPTD
Trigger: GTCAGTGGGAGGTTGGGATCAACACTGTTTATTATG...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATTCTATCCCAGAAAGATaGCCTGTAAGGTTGCACATC +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNSIPER*PVRLHI
Trigger: GATGTGCAACCTTACAGGTCATCTTTCTGGGATAGA...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGATCATCTCTCATCACCTaGCTGAATTCCAAGCAGACT +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRSSLIT*LNSKQT
Trigger: AGTCTGCTTGGAATTCAGTCAGGTGATGAGAGATGA...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGAATTAAACCACCACTTTaGCCGTGGGCACCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRIKPPL*PWAPAK
Trigger: CTTTGCAGGTGCCCACGGTCAAAGTGGTGGTTTAAT...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGAAAGGAAAGTAGGATCTaGTGCCGCTGCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRKESRI*CRCLLE
Trigger: CTCCAACAAGCAGCGGCAGCAGATCCTACTTTCCTT...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTTTTAATTCTCGGATGTaGTCATTGCTGCGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFFNSRM*SLLREA
Trigger: CGCTTCCCGCAGCAATGAGCACATCCGAGAATTAAA...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGCACCAGAAATGTGTATaGAGCAAACAGACTTGTATG +
Preference number: 4 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLHQKCV*SKQTCM
Trigger: CATACAAGTCTGTTTGCTGCATACACATTTCTGGTG...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGACCAGCCATGCAGGAATaGAAGCCCCATAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGPAMQE*KPHSAR
Trigger: TCTGGCACTATGGGGCTTGCATTCCTGCATGGCTGG...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTTGCCACCTTATTTGCTaGTTTTGTGGAAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVCHLIC*FCGRTD
Trigger: GTCTGTCCTTCCACAAAAGCAGCAAATAAGGTGGCA...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATCCGCATGATGTCTTCTaGCATGTTATGAAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNPHDVF*HVMKQQ
Trigger: TTGCTGCTTCATAACATGGCAGAAGACATCATGCGG...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGAATGTCAAAGAGGACTaGGGTCTTCATCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALNVKED*GLHQSQ
Trigger: TTGGCTCTGATGAAGACCCCAGTCCTCTTTGACATT...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATTCCTGGGCATCTCTCTaGGCGAGTGACATGTCCACG +
Preference number: 4 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHSWASL*ASDMST
Trigger: CGTGGACATGTCACTCGCCCAGAGAGATGCCCAGGA...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTCTTTTGGCCTTTTCCTaGCACTGGTGTTGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFLLAFS*HWCCRQ
Trigger: CTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAG...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTTCACTGACAGGGAACTaGCTTTGTTCTCGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFSLTGN*LCSRGF
Trigger: GAAACCACGAGAACAAAGCCAGTTCCCTGTCAGTGA...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATAGACCATTCCAGAGCTaGCTGACTCTTAATGTGGAA +
Preference number: 4 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYRPFQS*LTLNVE
Trigger: TTCCACATTAAGAGTCAGCCAGCTCTGGAATGGTCT...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATAGACCATTCCAGAGCTaGCTGACTCTTAATGTGGAA +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNRPFQS*LTLNVE
Trigger: TTCCACATTAAGAGTCAGCCAGCTCTGGAATGGTCT...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGAGCATCCTGTGTAGCTaGGATTACAGGAATGTGCCA +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQSILCS*DYRNVP
Trigger: TGGCACATTCCTGTAATCCCAGCTACACAGGATGCT...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTACAGGTTGAAGTGCAATaGTGTGATCTCAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLQVEVQ*CDLSSL
Trigger: TAGTGAGCTGAGATCACACCATTGCACTTCAACCTG...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTAGCCCATACTTAACATaGGTTGGATCTCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: QGTGFVLVVSARKMEGMTSPYLT*VGSLGS
Trigger: ACTCCCAAGAGATCCAACCCATGTTAAGTATGGGCT...AGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGAGCCCATACTTAACATaGGTTGGATCTCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RHIPQITRSPVTDRELALSPYLT*VGSLGS
Trigger: ACTCCCAAGAGATCCAACCCATGTTAAGTATGGGCT...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACAAGGCCAACAGAAAATaGGCATGGCATGGCATTAAA +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYKANRK*AWHGIK
Trigger: TTTAATGCCATGCCATGCCCATTTTCTGTTGGCCTT...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CAA 72 bp ATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTaGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: ITRSPVTDRELA*FSWFLQGRWKE
Trigger: TTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CAA 72 bp TTGGAAACCAAAGTAAATGTGTCTGTAGGTGCAATATaGCCTGCTGGGCACCAGGCTGGGAACTTTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LETKVNVSVGAI*PAGHQAGNFGV
Trigger: TACTCCAAAGTTCCCAGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CAA 72 bp GTCACTCTGGCCTGGATATCCACCTTGGTCTATTCCTaGACCAAAGCACATCCATGTACTTTACAACAGGTG +
Preference number: 4 (lower is better)
Translates to: VTLAWISTLVYS*TKAHPCTLQQV
Trigger: CACCTGTTGTAAAGTACATGGATGTGCTTTGGTCAAGGAATAGACCAAGGTGGATATCCAGGCCAGAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTAGGCTGGGGTATTCTTaGGACATTTCACCACGGCCA +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFRLGYS*DISPRP
Trigger: TGGCCGTGGTGAAATGTCTCAAGAATACCCCAGCCT...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR TCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTCTTCCGGTAATCCCCTaGAGTATCTCCCGAGATGTC +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFLPVIP*SISRDV
Trigger: GACATCTCGGGAGATACTTCAGGGGATTACCGGAAG...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTCCCCCAGGGTCACCTTaGGTTCATGGCAAGTTGTAT +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFPPGSP*VHGKLY
Trigger: ATACAACTTGCCATGAACTCAAGGTGACCCTGGGGG...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATTATACCTGGTGGGCTTaGCTGACTCCTTTACTGACA +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHYTWWA*LTPLLT
Trigger: TGTCAGTAAAGGAGTCAGTCAAGCCCACCAGGTATA...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTTCATGGTTAGATCTTTaGCTCAGCAACTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQASWLDL*LSNSTS
Trigger: AGAAGTGGAGTTGCTGAGTCAAAGATCTAACCATGA...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTAGGATCTGCTGCCGCTaGTTGTTGGAGCGACTCCCC +
Preference number: 4 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFRICCR*LLERLP
Trigger: GGGGAGTCGCTCCAACAAGCAGCGGCAGCAGATCCT...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATTGTTCTCGTGGTTTCTaGAAGGAAGATGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYCSRGF*KEDGRN
Trigger: ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACA...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGAATCATGAGGCATTCATaGAGTCCTCCAGCCCATACT +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRIMRHS*SPPAHT
Trigger: AGTATGGGCTGGAGGACTGCATGAATGCCTCATGAT...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTGGCAGTAGGTGCCTTTaGCTCTGGGAAGATCATGAG +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFGSRCL*LWEDHE
Trigger: CTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCC...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGATCTGACCGCAGGAACTaGTCTTTAGCAAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGSDRRN*SLASSP
Trigger: AGGGGAGCTTGCTAAAGAGCAGTTCCTGCGGTCAGA...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGAATGTGTCGCTTCGAATaGCCTCTTCCAGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRMCRFE*PLPGSF
Trigger: AAAAGACCCTGGAAGAGGCCATTCGAAGCGACACAT...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTAGGTTGGAAAAGGAGTaGGTGGAGACCCCTGATGCA +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFRLEKE*VETPDA
Trigger: TGCATCAGGGGTCTCCACCCACTCCTTTTCCAACCT...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATACGGCCTCAATTTCTTaGGCTCTAAGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHTASIS*ALRIFL
Trigger: CAGGAAGATCCTTAGAGCCCAAGAAATTGAGGCCGT...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTGGAGAGCAGCAGGGATaGGGCTTCAGCTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFGEQQG*GFSLGL
Trigger: CAAGCCCAAGCTGAAGCCCCATCCCTGCTGCTCTCC...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGATATCTATCTGCCAGATaGTCACTCTCCCTTACAGGG +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRYLSAR*SLSLTG
Trigger: CCCTGTAAGGGAGAGTGACCATCTGGCAGATAGATA...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATAAGGCCAACAGAAAATaGGCATGGCATGGCATTAAA +
Preference number: 4 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNKANRK*AWHGIK
Trigger: TTTAATGCCATGCCATGCCCATTTTCTGTTGGCCTT...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTAATTACATGACGAAATaGAGCCAAGTCTTAGCCACA +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQANYMTK*SQVLAT
Trigger: TGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATT...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTGCAAATGTCTGCAGATaGGCTACTCCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFANVCR*ATPWGS
Trigger: GGAGCCCCAGGGAGTAGCTCATCTGCAGACATTTGC...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGAGTCCAGGTTGTGGACTaGGTAATGATGTCCCTATCC +
Preference number: 4 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGVQVVD*VMMSLS
Trigger: GGATAGGGACATCATTACTCAGTCCACAACCTGGAC...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATGGATGTGCTCATTGCTaGGGGAAGCGAGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHGCAHC*GKRGSQ
Trigger: TTGAGATCCTCGCTTCCCGCAGCAATGAGCACATCC...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGAGCAAACAGACTTGTATaGCTCTGTCTGGCAATGACT +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRANRLV*LCLAMT
Trigger: AGTCATTGCCAGACAGAGGCATACAAGTCTGTTTGC...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTGGACTTCACTGCACCTaGAACCAACCAAGATCCCTT +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFGLHCT*NQPRSL
Trigger: AAGGGATCTTGGTTGGTTGCAGGTGCAGTGAAGTCC...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATTTCTCAGCTCATGGCTaGTCCACACCCTTCGGATGT +
Preference number: 4 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHFSAHG*STPFGC
Trigger: ACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAA...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATAATGTCAAAGAGGACTaGGGTCTTCATCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHNVKED*GLHQSQ
Trigger: TTGGCTCTGATGAAGACCCCAGTCCTCTTTGACATT...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACTCCGCAAAGAAGGCTaGGGTATTCTTGAGACATTT +
Preference number: 4 (lower is better)
Translates to: LSSRTVNLGAICGFVRNRLRKEG*GILETF
Trigger: AAATGTCTCAAGAATACCCCAGCCTTCTTTGCGGAG...TCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATAGACCATTCCAGAGCTaGCTGACTCTTAATGTGGAA +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHRPFQS*LTLNVE
Trigger: TTCCACATTAAGAGTCAGCCAGCTCTGGAATGGTCT...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATCAGGTTGAAGTGCAATaGTGTGATCTCAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHQVEVQ*CDLSSL
Trigger: TAGTGAGCTGAGATCACACCATTGCACTTCAACCTG...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTAAGGGCTGAATTCATCTaGTGCTTCTATTTTAGAAGT +
Preference number: 4 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLRAEFI*CFYFRS
Trigger: ACTTCTAAAATAGAAGCACCAGATGAATTCAGCCCT...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAGGAAGGACAGACTTGTaGAATTTCCTATTCCATTTC +
Preference number: 4 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRGRTDL*NFLFHF
Trigger: GAAATGGAATAGGAAATTCCACAAGTCTGTCCTTCC...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGCAGATTTCAGATCTTTaGTCAAATCCTTGCCGTAAG +
Preference number: 4 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQQISDL*SNPCRK
Trigger: CTTACGGCAAGGATTTGATCAAAGATCTGAAATCTG...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATGTAGAAAAGGCATCCTaGGAGAGTTCTAGACCGACC +
Preference number: 4 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHVEKAS*ESSRPT
Trigger: GGTCGGTCTAGAACTCTCTCAGGATGCCTTTTCTAC...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTTCTAGCTTCTGGACATaGCACCATAATTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFSSFWT*HHNSQK
Trigger: TTTCTGAGAATTATGGTGTCATGTCCAGAAGCTAGA...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGACTAGTCTTGAACTCCTaGGCTCAAGTGATCCTCTCA +
Preference number: 4 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGLVLNS*AQVILS
Trigger: TGAGAGGATCACTTGAGCTCAGGAGTTCAAGACTAG...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTTTGAGGCATGGACTCTaGCGCAGAGCTGACGTGTTG +
Preference number: 4 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFLRHGL*RRADVL
Trigger: CAACACGTCAGCTCTGCGTCAGAGTCCATGCCTCAA...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACAGGTATTCACCTGATTaGTGTAAACTTTCAATTCGT +
Preference number: 4 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYRYSPD*CKLSIR
Trigger: ACGAATTGAAAGTTTACAGCAATCAGGTGAATACCT...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTCTGGCTTTGTTCTCGTaGTTTCTGCAAGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFLALFS*FLQGRW
Trigger: CCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAG...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTTGTGGAAACAAGTTTTaGCTACAGACATTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQACGNKF*LQTFRF
Trigger: AAACCTGAATGTCTGTAGCCAAAACTTGTTTCCACA...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTAGGGCTGAATTCATCTaGTGCTTCTATTTTAGAAGT +
Preference number: 4 (lower is better)
Translates to: ETKVNVSVGAILPAGHQARAEFI*CFYFRS
Trigger: ACTTCTAAAATAGAAGCACCAGATGAATTCAGCCCT...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGACTTCCAGGGTCTTTTTaGATTCTGCTTTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGLPGSF*ILLCRL
Trigger: GAGCCTACAAAGCAGAATTCAAAAAGACCCTGGAAG...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATCAGGAGCCAAATGGGTaGCATGGGCTTAGTGTAATA +
Preference number: 4 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHQEPNG*HGLSVI
Trigger: TATTACACTAAGCCCATGTCACCCATTTGGCTCCTG...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTTCATCTCTCATCACCTaGCTGAATTCCAAGCAGACT +
Preference number: 4 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFSSLIT*LNSKQT
Trigger: AGTCTGCTTGGAATTCAGTCAGGTGATGAGAGATGA...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATGAACACCTCTACTTTTaGGGTGTTCTCTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHEHLYF*GVLCVS
Trigger: GCTCACACAGAGAACACCGCAAAAGTAGAGGTGTTC...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGACTCCGCAAAGAAGGCTaGGGTATTCTTGAGACATTT +
Preference number: 4 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGLRKEG*GILETF
Trigger: AAATGTCTCAAGAATACCCCAGCCTTCTTTGCGGAG...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTAGGGCTGAATTCATCTaGTGCTTCTATTTTAGAAGT +
Preference number: 4 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFRAEFI*CFYFRS
Trigger: ACTTCTAAAATAGAAGCACCAGATGAATTCAGCCCT...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATGGAAGGACAGACTTGTaGAATTTCCTATTCCATTTC +
Preference number: 4 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHGRTDL*NFLFHF
Trigger: GAAATGGAATAGGAAATTCCACAAGTCTGTCCTTCC...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTTTGACCGTGGGCACCTaGAAAGGTTCATCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFLTVGT*KGSSFS
Trigger: GCTGAAAGATGAACCTTTGCAGGTGCCCACGGTCAA...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGAGTCACCTTGAGTTCATaGCAAGTTGTATATGCCAAG +
Preference number: 4 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGVTLSS*QVVYAK
Trigger: CTTGGCATATACAACTTGCCATGAACTCAAGGTGAC...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATTCATGGTTAGATCTTTaGCTCAGCAACTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHSWLDL*LSNSTS
Trigger: AGAAGTGGAGTTGCTGAGTCAAAGATCTAACCATGA...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTGGTCAGAGCTCTTTCTaGTTCAGGACTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFGQSSF*FRTSSA
Trigger: AGCTGATGAAGTCCTGAAGCAGAAAGAGCTCTGACC...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTACATGTCCACGTTTGTaGTTTCATCACGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFTCPRL*FHHGFP
Trigger: AGGGAAACCGTGATGAAAGCACAAACGTGGACATGT...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR GCA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATCACCAGAAATGTGTATaGAGCAAACAGACTTGTATG +
Preference number: 4 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHHQKCV*SKQTCM
Trigger: CATACAAGTCTGTTTGCTGCATACACATTTCTGGTG...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTAATGTCAAAGAGGACTaGGGTCTTCATCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFNVKED*GLHQSQ
Trigger: TTGGCTCTGATGAAGACCCCAGTCCTCTTTGACATT...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR TCA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTTCTAGCTTCTGGACATaGCACCATAATTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFSSFWT*HHNSQK
Trigger: TTTCTGAGAATTATGGTGTCATGTCCAGAAGCTAGA...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
3UTR CAA 72 bp GTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTaGAGTTTTTGCCACCTTATTTGCTGCTTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VNFQFVSRVPIN*SFCHLICCFCG
Trigger: TCCACAAAAGCAGCAAATAAGGTGGCAAAAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS CCA 90 bp GTGGGCGGGAGTGGCTCTCTCCGCGGGCGTCCCGGGCGCGGCGCCTaGGTTCTGCCTAGGGGCTGGGTCCCACTCCCGCTCGCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: VGGSGSLRGRPGRGA*VLPRGWVPLPLAGP
Trigger: GGGCCCCGCGAGCGGGAGTGGGACCCAGCCCCTAGGCAGAACCCAGGCGCCGCGCCCGGGACGCCCGCGGAGAGAGCCACTCCCGCCCAC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000463657.1
CDS CCA 90 bp ACGGGGACTCCGGACGCGAGGGGCGAAATGGGACGTGGGCGGGAGTaGCTCTCTCCGCGGGCGTCCCGGGCGCGGCGCCTGGGTTCTGCC +
Preference number: 5 (lower is better)
Translates to: TGTPDARGEMGRGRE*LSPRASRARRLGSA
Trigger: GGCAGAACCCAGGCGCCGCGCCCGGGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000463657.1
CDS CCA 90 bp ACACCTGGCCACGGGGACTCCGGACGCGAGGGGCGAAATGGGACGTaGGCGGGAGTGGCTCTCTCCGCGGGCGTCCCGGGCGCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: TPGHGDSGREGRNGT*AGVALSAGVPGAAP
Trigger: AGGCGCCGCGCCCGGGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGTGGCCAGGTGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422982.8
CDS CCA 90 bp ATCCCTGGCCACGGGGACTCCGGACGCGAGGGGCGAAATGGGACGTaGGCGGGAGTGGCTCTCTCCGCGGGCGTCCCGGGCGCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: IPGHGDSGREGRNGT*AGVALSAGVPGAAP
Trigger: AGGCGCCGCGCCCGGGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGTGGCCAGGGAT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438331.5
CDS CCA 90 bp AACCCTGGCCACGGGGACTCCGGACGCGAGGGGCGAAATGGGACGTaGGCGGGAGTGGCTCTCTCCGCGGGCGTCCCGGGCGCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: NPGHGDSGREGRNGT*AGVALSAGVPGAAP
Trigger: AGGCGCCGCGCCCGGGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGTGGCCAGGGTT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463657.1
CDS CCA 90 bp AGATCTGGCCACGGGGACTCCGGACGCGAGGGGCGAAATGGGACGTaGGCGGGAGTGGCTCTCTCCGCGGGCGTCCCGGGCGCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: RSGHGDSGREGRNGT*AGVALSAGVPGAAP
Trigger: AGGCGCCGCGCCCGGGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGTGGCCAGATCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372231.7
CDS CCA 90 bp CAGACACACACCTGGCCACGGGGACTCCGGACGCGAGGGGCGAAATaGGACGTGGGCGGGAGTGGCTCTCTCCGCGGGCGTCCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: QTHTWPRGLRTRGAK*DVGGSGSLRGRPGR
Trigger: GCGCCCGGGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGTGGCCAGGTGTGTGTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422982.8
CDS CCA 90 bp GAAGTGAAACCCTGGCCACGGGGACTCCGGACGCGAGGGGCGAAATaGGACGTGGGCGGGAGTGGCTCTCTCCGCGGGCGTCCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: EVKPWPRGLRTRGAK*DVGGSGSLRGRPGR
Trigger: GCGCCCGGGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGTGGCCAGGGTTTCACTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463657.1
CDS CCA 90 bp TCCAATAATCCCTGGCCACGGGGACTCCGGACGCGAGGGGCGAAATaGGACGTGGGCGGGAGTGGCTCTCTCCGCGGGCGTCCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: SNNPWPRGLRTRGAK*DVGGSGSLRGRPGR
Trigger: GCGCCCGGGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGTGGCCAGGGATTATTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438331.5
CDS CCA 90 bp CGGGTATCCTGGGTAGCTCGGCACTGGCTGCTGCTGCCCAGGGAGTaGCACTGGAGGCTGACCAGGGTAGGTCACTGGTGGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RVSWVARHWLLLPRE*HWRLTRVGHWWLPR
Trigger: CCTGGGCAGCCACCAGTGACCTACCCTGGTCAGCCTCCAGTGCCACTCCCTGGGCAGCAGCAGCCAGTGCCGAGCTACCCAGGATACCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS CCA 90 bp GGGGGTGACAGTCCCAGACCCCGGGTATCCTGGGTAGCTCGGCACTaGCTGCTGCTGCCCAGGGAGTGGCACTGGAGGCTGACCAGGGTA +
Preference number: 5 (lower is better)
Translates to: GGDSPRPRVSWVARH*LLLPREWHWRLTRV
Trigger: TACCCTGGTCAGCCTCCAGTGCCACTCCCTGGGCAGCAGCAGCCAGTGCCGAGCTACCCAGGATACCCGGGGTCTGGGACTGTCACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000481805.1
CDS-3UTR CAA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCCTGCCACCCCCATGCTaGCAGGTGCACTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: APATPMLAGALPGYRVSGLPPPC*QVHSLA
Trigger: AGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAG...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS TCA 90 bp GCAGGACCTCGGCATCTCGCAGGGGGTCAAAGCCGGGAGCATCAGTaGTGGTGCCTCGGCTTCCAAACTGGGTTGGGGGCACAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: AGPRHLAGGQSREHQ*WCLGFQTGLGAQRG
Trigger: CCCCCGCTGTGCCCCCAACCCAGTTTGGAAGCCGAGGCACCATCACTGATGCTCCCGGCTTTGACCCCCTGCGAGATGCCGAGGTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000481805.1
CDS-3UTR CAA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCTGCTGCCGCTGCTTGTaGGAGCGACTCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVCCRCL*ERLPRQ
Trigger: CTGCCTGGGGAGTCGCTCCAACAAGCAGCGGCAGCA...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS TCA 90 bp TGTCCCGCGCCCCCACCCCGCAGCTCGCCTTGCCGTAAGCCGTCTTaGAGGAAAGTAGGATCTGCTGCCGCTGCTTGTTGGAGCGACTCC +
Preference number: 5 (lower is better)
Translates to: CPAPPPRSSPCRKPS*RKVGSAAAACWSDS
Trigger: GGAGTCGCTCCAACAAGCAGCGGCAGCAGATCCTACTTTCCTTCAAGACGGCTTACGGCAAGGCGAGCTGCGGGGTGGGGGCGCGGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481805.1
CDS-3UTR CAA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCTCTCGGATGTGCTCATaGCTGCGGGAAGCGAGGATC +
Preference number: 5 (lower is better)
Translates to: APATPMLAGALPGYRVSGSRMCS*LREARI
Trigger: GATCCTCGCTTCCCGCAGCAATGAGCACATCCGAGA...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS TCA 90 bp AAACTGCTACCAGGTGGGCCCGGCTCCGGGAGCACAGAACCGCATTaGACTTGGACTCGTCTGTTCCCAGGCGGTTCTCCCCGGCCGCAT +
Preference number: 5 (lower is better)
Translates to: KLLPGGPGSGSTEPH*TWTRLFPGGSPRPH
Trigger: ATGCGGCCGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCTCCCGGAGCCGGGCCCACCTGGTAGCAGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GCTCCTGCCACCCCCATGCTTGCAGGTGCACTCCCTGGCTACAGGGTCAGCGGCAATGTCCCAGACATGTaGGCCGCCATTCCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: APATPMLAGALPGYRVSGNVPDM*AAIPER
Trigger: TCTCTCGGGAATGGCGGCCAACATGTCTGGGACATT...GCCGCTGACCCTGTAGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCATCTGCTGCCGCTGCTaGTTGGAGCGACTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGICCRC*LERLPR
Trigger: CCTGGGGAGTCGCTCCAACAAGCAGCGGCAGCAGAT...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCGGATGGGGCTTCAGCTaGGGCTTGAGGCATGGACTC +
Preference number: 5 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVGWGFS*GLRHGL
Trigger: GAGTCCATGCCTCAAGCCCAAGCTGAAGCCCCATCC...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS GCA 90 bp CCTTCACCTCCCAACGATGCCACCAGCTGGATGGGCAGAAGGAAATaGCCTCCTGCTCCTTACTGTCCATCCGGGAGATCCGGGCCCACC +
Preference number: 5 (lower is better)
Translates to: PSPPNDATSWMGRRK*PPAPYCPSGRSGPT
Trigger: GGTGGGCCCGGATCTCCCGGATGGACAGTAAGGAGCAGGAGGGCATTTCCTTCTGCCCATCCAGCTGGTGGCATCGTTGGGAGGTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481805.1
CDS-3UTR CAA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCCGCAGAGCTGACGTGTaGACCAGGACCTGCCATCAA +
Preference number: 5 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVRRADV*TRTCHQ
Trigger: TTGATGGCAGGTCCTGGTCAACACGTCAGCTCTGCG...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCCTGCCACCCCCATGCTaGCAGGTGCACTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPLPPPC*QVHSLA
Trigger: AGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAG...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS CCA 90 bp GCACCCGGTGGCATCCTTCACCTCCCAACGATGCCACCAGCTGGATaGGCAGAAGGAAATGCCCTCCTGCTCCTTACTGTCCATCCGGGA +
Preference number: 5 (lower is better)
Translates to: APGGILHLPTMPPAG*AEGNALLLLTVHPG
Trigger: TCCCGGATGGACAGTAAGGAGCAGGAGGGCATTTCCTTCTGCCCATCCAGCTGGTGGCATCGTTGGGAGGTGAAGGATGCCACCGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481805.1
CDS-3UTR CAA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAATCTGCTGCCGCTGCTaGTTGGAGCGACTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEICCRC*LERLPR
Trigger: CCTGGGGAGTCGCTCCAACAAGCAGCGGCAGCAGAT...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCCCAACCAAGATCCCTTaGCCTTTCAGGTGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVPTKIP*PFRCLG
Trigger: GCCCAGACACCTGAAAGGCAAAGGGATCTTGGTTGG...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCTGGGGTTTCACCATGTaGGCCAGGCTGGGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: TDPGPVAHYTGQEGWKTGWGFTM*ARLGLE
Trigger: TTCGAGACCCAGCCTGGCCAACATGGTGAAACCCCA...GCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTGGATGGGGCTTCAGCTaGGGCTTGAGGCATGGACTC +
Preference number: 5 (lower is better)
Translates to: RLPSQARLPFSPQRGHGAGWGFS*GLRHGL
Trigger: GAGTCCATGCCTCAAGCCCAAGCTGAAGCCCCATCC...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS TCA 90 bp ATGTCCCAGACATGTTGGCCGCCATTCCCGAGAGATAGTCCTGGTTaGACTGCCCCGCATAGGTGGCCACGTTATCCAGCCCGATGGGGG +
Preference number: 5 (lower is better)
Translates to: MSQTCWPPFPRDSPG*TAPHRWPRYPARWG
Trigger: CCCCCATCGGGCTGGATAACGTGGCCACCTATGCGGGGCAGTTCAACCAGGACTATCTCTCGGGAATGGCGGCCAACATGTCTGGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000437799.1
ENST00000438331.5
CDS CCA 90 bp CTCAGCACCCGGTGGCATCCTTCACCTCCCAACGATGCCACCAGCTaGATGGGCAGAAGGAAATGCCCTCCTGCTCCTTACTGTCCATCC +
Preference number: 5 (lower is better)
Translates to: LSTRWHPSPPNDATS*MGRRKCPPAPYCPS
Trigger: GGATGGACAGTAAGGAGCAGGAGGGCATTTCCTTCTGCCCATCCAGCTGGTGGCATCGTTGGGAGGTGAAGGATGCCACCGGGTGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481805.1
CDS CCA 90 bp CCAGGGATAGATGTCTGGAGCCTCTCAGCAAACCTCAGCACCCGGTaGCATCCTTCACCTCCCAACGATGCCACCAGCTGGATGGGCAGA +
Preference number: 5 (lower is better)
Translates to: PGIDVWSLSANLSTR*HPSPPNDATSWMGR
Trigger: TCTGCCCATCCAGCTGGTGGCATCGTTGGGAGGTGAAGGATGCCACCGGGTGCTGAGGTTTGCTGAGAGGCTCCAGACATCTATCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481805.1
CDS-3UTR CAA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGTGCTGCCGCTGCTTGTaGGAGCGACTCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSECCRCL*ERLPRQ
Trigger: CTGCCTGGGGAGTCGCTCCAACAAGCAGCGGCAGCA...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCAAGGCTGGGGTATTCTaGAGACATTTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQAKAGVF*RHFTTA
Trigger: GGCCGTGGTGAAATGTCTCAAGAATACCCCAGCCTT...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCAAGGCTGGGGTATTCTaGAGACATTTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVKAGVF*RHFTTA
Trigger: GGCCGTGGTGAAATGTCTCAAGAATACCCCAGCCTT...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTCGTGGTACAGCGACTaGCCGTACATCCGCTTATAC +
Preference number: 5 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQASWYSD*PYIRLY
Trigger: GTATAAGCGGATGTACGGCAAGTCGCTGTACCACGA...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS GCA 90 bp CTCAGCAAACCTCAGCACCCGGTGGCATCCTTCACCTCCCAACGATaGCACCAGCTGGATGGGCAGAAGGAAATGCCCTCCTGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: LSKPQHPVASFTSQR*HQLDGQKEMPSCSL
Trigger: TAAGGAGCAGGAGGGCATTTCCTTCTGCCCATCCAGCTGGTGGCATCGTTGGGAGGTGAAGGATGCCACCGGGTGCTGAGGTTTGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481805.1
CDS CCA 90 bp CCTGCAGGGCTCAGCTGGGTGCCCGATGGGCATTCGACATCATCATaGGGCCTCTGGCCTGTTAGATGCTTTCCTCTACATGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PAGLSWVPDGHSTSS*GLWPVRCFPLHGSF
Trigger: GAAGCTGCCATGTAGAGGAAAGCATCTAACAGGCCAGAGGCCCCATGATGATGTCGAATGCCCATCGGGCACCCAGCTGAGCCCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS CCA 90 bp CTGGTGGGTAGCCACCTGGGGGCGGGGGATAGCCAGGGTAGCTCATaGTTAGATCTGGAAGAGAAGACGAAAGCACATTCAGGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LVGSHLGAGDSQGSS*LDLEEKTKAHSGSA
Trigger: GGCAGAGCCTGAATGTGCTTTCGTCTTCTCTTCCAGATCTAACCATGAGCTACCCTGGCTATCCCCCGCCCCCAGGTGGCTACCCACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437799.1
CDS-3UTR CAA 90 bp GGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTTCACCCACCCAGTCGAGCACAGAACCGCATaGAACTTGGACTCGTCTGTT +
Preference number: 5 (lower is better)
Translates to: GTPPFLSSARTRCFTHPVEHRTA*NLDSSV
Trigger: AACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCTC...GACTGGGTGGGTGAAGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCGTCACTGTTCAGTCATaGCCACCACAGATCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PTQVLWHTIRVRRGGRQAVTVQS*PPQIFS
Trigger: GCTGAAGATCTGTGGTGGCAATGACTGAACAGTGAC...GGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACCCTCAACGCAGGAGGTaGGAAAAGGAGTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDPQRRR*EKEWVE
Trigger: CTCCACCCACTCCTTTTCCAACCTCCTGCGTTGAGG...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTGGGGTTTCACCATGTaGGCCAGGCTGGGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: KLVTHSPDAQATFSGTPPWGFTM*ARLGLE
Trigger: TTCGAGACCCAGCCTGGCCAACATGGTGAAACCCCA...GGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGTCTGTAGGTGCAATATaGCCTGCTGGGCACCAGGCT +
Preference number: 5 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQSVGAI*PAGHQA
Trigger: AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGA...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTCTGCCACCCCCATGCTaGCAGGTGCACTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: TRTCHQSQVDQASSQLMALPPPC*QVHSLA
Trigger: AGCCAGGGAGTGCACCTGCAAGCATGGGGGTGGCAG...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGCATGGGTTGGATCTCTaGGGAGTGACCATGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQHGLDL*GVTMRA
Trigger: TGCCCTCATGGTCACTCCCAAGAGATCCAACCCATG...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGAACCTCCCACTGACCTaGGAAGGCAGTAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQNLPLT*EGSRCL
Trigger: AAGGCACCTACTGCCTTCCAAGGTCAGTGGGAGGTT...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS GCA 90 bp GGACCCAGCTTCTTGAAAGGGCAGCCACCACCACAACTGGGACCCTaGAGAAGAAACTGCTGCATCTGCCCTGCTTGTCGCAGACCAGTT +
Preference number: 5 (lower is better)
Translates to: GPSFLKGQPPPQLGP*RRNCCICPACRRPV
Trigger: AACTGGTCTGCGACAAGCAGGGCAGATGCAGCAGTTTCTTCTGCAGGGTCCCAGTTGTGGTGGTGGCTGCCCTTTCAAGAAGCTGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437799.1
CDS CCA 90 bp CTCAGCTGGGTGCCCGATGGGCATTCGACATCATCATGGGGCCTCTaGCCTGTTAGATGCTTTCCTCTACATGGCAGCTTCGGATCGGCT +
Preference number: 5 (lower is better)
Translates to: LSWVPDGHSTSSWGL*PVRCFPLHGSFGSA
Trigger: AGCCGATCCGAAGCTGCCATGTAGAGGAAAGCATCTAACAGGCCAGAGGCCCCATGATGATGTCGAATGCCCATCGGGCACCCAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS CCA 90 bp TGCACTCCAGCCTGGGCGATGGAAGTGAAACCAGTTCCACGTGGCTaGGGAGGCCTCACAATCATGGCTGAAGGTGAAAGGCACGTCTCA +
Preference number: 5 (lower is better)
Translates to: CTPAWAMEVKPVPRG*GGLTIMAEGERHVS
Trigger: TGAGACGTGCCTTTCACCTTCAGCCATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGGTTTCACTTCCATCGCCCAGGCTGGAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474545.1
CDS-3UTR CAA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTTGCTGCCGCTGCTTGTaGGAGCGACTCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQACCRCL*ERLPRQ
Trigger: CTGCCTGGGGAGTCGCTCCAACAAGCAGCGGCAGCA...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGTCGTGGTACAGCGACTaGCCGTACATCCGCTTATAC +
Preference number: 5 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQSWYSD*PYIRLY
Trigger: GTATAAGCGGATGTACGGCAAGTCGCTGTACCACGA...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAACCAACCAAGATCCCTTaGCCTTTCAGGTGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEPTKIP*PFRCLG
Trigger: GCCCAGACACCTGAAAGGCAAAGGGATCTTGGTTGG...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGACCTCAACGCAGGAGGTaGGAAAAGGAGTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGPQRRR*EKEWVE
Trigger: CTCCACCCACTCCTTTTCCAACCTCCTGCGTTGAGG...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGCCCCCAGGGTCACCTaGAGTTCATGGCAAGTTGTA +
Preference number: 5 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEAPRVT*SSWQVV
Trigger: TACAACTTGCCATGAACTCAAGGTGACCCTGGGGGC...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCTCTGTAGGTGCAATATaGCCTGCTGGGCACCAGGCT +
Preference number: 5 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVSVGAI*PAGHQA
Trigger: AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGA...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACCATGGGTTGGATCTCTaGGGAGTGACCATGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDHGLDL*GVTMRA
Trigger: TGCCCTCATGGTCACTCCCAAGAGATCCAACCCATG...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTAACCTCCCACTGACCTaGGAAGGCAGTAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSNLPLT*EGSRCL
Trigger: AAGGCACCTACTGCCTTCCAAGGTCAGTGGGAGGTT...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGCCAGATGTCCATAGCTaGCTGGCATGCAGGAGATAC +
Preference number: 5 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQPDVHS*LACRRY
Trigger: GTATCTCCTGCATGCCAGCAAGCTATGGACATCTGG...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR CAA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACTGCTGCCGCTGCTTGTaGGAGCGACTCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYCCRCL*ERLPRQ
Trigger: CTGCCTGGGGAGTCGCTCCAACAAGCAGCGGCAGCA...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAATCTCGGATGTGCTCATaGCTGCGGGAAGCGAGGATC +
Preference number: 5 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKSRMCS*LREARI
Trigger: GATCCTCGCTTCCCGCAGCAATGAGCACATCCGAGA...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CACACCACGTGGAGCCATGCCCATCCGAGCCCAAGAACATCTGTACAGCGTCAGAGAACCGCATTGAACTaGGACTCGTCTGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: HTTWSHAHPSPRTSVQRQRTALN*DSSVPR
Trigger: CCTGGGAACAGACGAGTCCAAGTTCAATGCGGTTCT...CTGACGCTGTACAGATGTTCTTGGGCTCGGATGGGCATGGCTCCACGTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAAAGGCTGGGGTATTCTaGAGACATTTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEKAGVF*RHFTTA
Trigger: GGCCGTGGTGAAATGTCTCAAGAATACCCCAGCCTT...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCAAGGCTGGGGTATTCTaGAGACATTTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVKAGVF*RHFTTA
Trigger: GGCCGTGGTGAAATGTCTCAAGAATACCCCAGCCTT...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGATGCAGCAAACAGACTaGTATGCCTCTGTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRMQQTD*YASVWQ
Trigger: TTGCCAGACAGAGGCATACAAGTCTGTTTGCTGCAT...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACACGGTGCTGACAGGGAACTGGCTTaGTTCTCGTGGTTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: RLPSQARLPFSPQRGHGADRELA*FSWFLQ
Trigger: TTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTC...AGCACCGTGTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAATGGGGTTTCACCATGTaGGCCAGGCTGGGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKWGFTM*ARLGLE
Trigger: TTCGAGACCCAGCCTGGCCAACATGGTGAAACCCCA...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCGCAGAGCTGACGTGTaGACCAGGACCTGCCATCAA +
Preference number: 5 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSERRADV*TRTCHQ
Trigger: TTGATGGCAGGTCCTGGTCAACACGTCAGCTCTGCG...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGCCCCCAGGGTCACCTaGAGTTCATGGCAAGTTGTA +
Preference number: 5 (lower is better)
Translates to: PERVLDRPRSCGTLYGSGAPRVT*SSWQVV
Trigger: TACAACTTGCCATGAACTCAAGGTGACCCTGGGGGC...TCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS GCA 90 bp CCCGATGGGCATTCGACATCATCATGGGGCCTCTGGCCTGTTAGATaGTTTCCTCTACATGGCAGCTTCGGATCGGCTCTTCATCTCCAG +
Preference number: 5 (lower is better)
Translates to: PDGHSTSSWGLWPVR*FPLHGSFGSALHLQ
Trigger: CTGGAGATGAAGAGCCGATCCGAAGCTGCCATGTAGAGGAAAGCATCTAACAGGCCAGAGGCCCCATGATGATGTCGAATGCCCATCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS-3UTR CAA 90 bp GAGGGGTGGAAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTAATGTCCCAGACATGTaGGCCGCCATTCCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: EGWKTGLSSRTVNLGAICNVPDM*AAIPER
Trigger: TCTCTCGGGAATGGCGGCCAACATGTCTGGGACATT...ACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTTCCACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTGAGCACAGAACCGCATaGAACTTGGACTCGTCTGTT +
Preference number: 5 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSEHRTA*NLDSSV
Trigger: AACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCTC...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGATTCTCTGGTACTCATaGAAAACTGCTACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRILWYS*KTATRW
Trigger: CCACCTGGTAGCAGTTTTCAATGAGTACCAGAGAAT...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp AGGCATCCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCGTGGTACAGCGACTaGCCGTACATCCGCTTATAC +
Preference number: 5 (lower is better)
Translates to: RHPERVLDRPRSCGTLYGSWYSD*PYIRLY
Trigger: GTATAAGCGGATGTACGGCAAGTCGCTGTACCACGA...CCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp GGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGCCTAAGCTCTGTCACTGTTCAGTCATaGCCACCACAGATCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GPVAHYTGQEGWKTGLSSVTVQS*PPQIFS
Trigger: GCTGAAGATCTGTGGTGGCAATGACTGAACAGTGAC...AGAGCTTAGGCCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGGAACTGGCTTaGTTCTCGTGGTTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEDRELA*FSWFLQ
Trigger: TTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTC...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACGACAGGGAACTGGCTTaGTTCTCGTGGTTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDDRELA*FSWFLQ
Trigger: TTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTC...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp TCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCTTACGAGTCCCTGCAAACCAACCAAGATCCCTTaGCCTTTCAGGTGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: SCLDFGNLPSHVLTSPCKPTKIP*PFRCLG
Trigger: GCCCAGACACCTGAAAGGCAAAGGGATCTTGGTTGG...TTTGCAGGGACTCGTAAGGACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGGATACACACTCAGGCTaGAAAACCACCACTTTAGGA +
Preference number: 5 (lower is better)
Translates to: DRPRSCGTLYGSGGVEDRDTHSG*KTTTLG
Trigger: TCCTAAAGTGGTGGTTTTCAAGCCTGAGTGTGTATC...CCTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS TCA 90 bp CGAGATGTCGTGGTACAGCGACTTGCCGTACATCCGCTTATACTCTaGTCTGATGTCCAGGAGGTCGGTCTCGCTGCGAGACACCATGAT +
Preference number: 5 (lower is better)
Translates to: RDVVVQRLAVHPLIL*SDVQEVGLAARHHD
Trigger: ATCATGGTGTCTCGCAGCGAGACCGACCTCCTGGACATCAGATCAGAGTATAAGCGGATGTACGGCAAGTCGCTGTACCACGACATCTCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp GTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGAATGTCCCAGACATGTaGGCCGCCATTCCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: VTKLVTHSPDAQATFSGTNVPDM*AAIPER
Trigger: TCTCTCGGGAATGGCGGCCAACATGTCTGGGACATT...CGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACCTTCTCAGGCACGCCTACAGGTTGGGCATGTaGGCTCCTCCAAATGTCCCA +
Preference number: 5 (lower is better)
Translates to: NKARDTLTRCTGYLLRHAYRLGM*APPNVP
Trigger: TGGGACATTTGGAGGAGCCAACATGCCCAACCTGTA...GGCGTGCCTGAGAAGGTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTAATCTGCTGCCGCTGCTaGTTGGAGCGACTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLICCRC*LERLPR
Trigger: CCTGGGGAGTCGCTCCAACAAGCAGCGGCAGCAGAT...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGTGACATGTCCACGTTaGTGCTTTCATCACGGTTTC +
Preference number: 5 (lower is better)
Translates to: VLDRPRSCGTLYGSGGVEVTCPR*CFHHGF
Trigger: GAAACCGTGATGAAAGCACAAACGTGGACATGTCAC...TTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTAACCTCCCACTGACCTaGGAAGGCAGTAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: TRTCHQSQVDQASSQLMANLPLT*EGSRCL
Trigger: AAGGCACCTACTGCCTTCCAAGGTCAGTGGGAGGTT...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGACCGACCCAGGTCCTGTGGCACACTATACGGGTCAGGAGGGGTGGAAGACAGGATACACACTCAGGCTaGAAAACCACCACTTTAGGA +
Preference number: 5 (lower is better)
Translates to: RPTQVLWHTIRVRRGGRQDTHSG*KTTTLG
Trigger: TCCTAAAGTGGTGGTTTTCAAGCCTGAGTGTGTATC...CTGTCTTCCACCCCTCCTGACCCGTATAGTGTGCCACAGGACCTGGGTCGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS TCA 90 bp ACGGTTTCCCTGAGAGAGAGAGATGAGGAGCCGCTGGAAGTGCCCTaGTGTGTCGCTTCGAATGGCCTCTTCCAGGGTCTTTTTGAATTC +
Preference number: 5 (lower is better)
Translates to: TVSLRERDEEPLEVP*CVASNGLFQGLFEF
Trigger: GAATTCAAAAAGACCCTGGAAGAGGCCATTCGAAGCGACACATCAGGGCACTTCCAGCGGCTCCTCATCTCTCTCTCTCAGGGAAACCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS GCA 90 bp CCGCATGATGTCTTCTGCCATGTTATGAAGCAGCAAGAAGGCCCTTaGCAGATGCAGCCTCACGATCTTCTCAGCCTCCAGAACTGTGAG +
Preference number: 5 (lower is better)
Translates to: PHDVFCHVMKQQEGP*QMQPHDLLSLQNCE
Trigger: CTCACAGTTCTGGAGGCTGAGAAGATCGTGAGGCTGCATCTGGCAAGGGCCTTCTTGCTGCTTCATAACATGGCAGAAGACATCATGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438331.5
ENST00000463657.1
CDS-3UTR CAA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGAATGTCCCAGACATGTaGGCCGCCATTCCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLNVPDM*AAIPER
Trigger: TCTCTCGGGAATGGCGGCCAACATGTCTGGGACATT...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTAGAACCGCATTGAACTaGGACTCGTCTGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TRTCHQSQVDQASSQLMARTALN*DSSVPR
Trigger: CCTGGGAACAGACGAGTCCAAGTTCAATGCGGTTCT...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGGTCACTGTTCAGTCATaGCCACCACAGATCTTCAGC +
Preference number: 5 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSEVTVQS*PPQIFS
Trigger: GCTGAAGATCTGTGGTGGCAATGACTGAACAGTGAC...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp AGGCATCCTGAGAGAGTTCTAGACCGACCCAGGTCCTGTGGCACACTATACGGGATGCAGCAAACAGACTaGTATGCCTCTGTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: RHPERVLDRPRSCGTLYGMQQTD*YASVWQ
Trigger: TTGCCAGACAGAGGCATACAAGTCTGTTTGCTGCAT...CCCGTATAGTGTGCCACAGGACCTGGGTCGGTCTAGAACTCTCTCAGGATGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGGACAGGGAACTGGCTTaGTTCTCGTGGTTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSEDRELA*FSWFLQ
Trigger: TTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTC...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTCATGGGTTGGATCTCTaGGGAGTGACCATGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAHGLDL*GVTMRA
Trigger: TGCCCTCATGGTCACTCCCAAGAGATCCAACCCATG...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACGATACACACTCAGGCTaGAAAACCACCACTTTAGGA +
Preference number: 5 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDDTHSG*KTTTLG
Trigger: TCCTAAAGTGGTGGTTTTCAAGCCTGAGTGTGTATC...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTTTCAGGTGTCTGGGCCTCCTGCCTGGATTTCGGGAACCTCCCTTCCCATGTCCCTTATTTGCTGCTTTaGTGGAAGGACAGACTTGTG +
Preference number: 5 (lower is better)
Translates to: LSGVWASCLDFGNLPSHVPYLLL*WKDRLV
Trigger: CACAAGTCTGTCCTTCCACAAAAGCAGCAAATAAGG...GACATGGGAAGGGAGGTTCCCGAAATCCAGGCAGGAGGCCCAGACACCTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS GCA 90 bp CAACTTGAGGGCAAGGCATGTGGCTTCTTCCAGATGTCCATAGCTTaGTGGCATGCAGGAGATACTCGAGATGTCGTGGTACAGCGACTT +
Preference number: 5 (lower is better)
Translates to: QLEGKACGFFQMSIA*WHAGDTRDVVVQRL
Trigger: AAGTCGCTGTACCACGACATCTCGAGTATCTCCTGCATGCCAGCAAGCTATGGACATCTGGAAGAAGCCACATGCCTTGCCCTCAAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR CAA 90 bp AGATGCACAGGCTACCTTCTCAGGCACGCCTCCCTTTCTCTCCTCAGCGAGGACTCATCAGAGCCAAGATaGTCTTCTCAAAGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: RCTGYLLRHASLSLLSEDSSEPR*SSQSFL
Trigger: CAGGAAACTTTGAGAAGACAATCTTGGCTCTGATGA...GTCCTCGCTGAGGAGAGAAAGGGAGGCGTGCCTGAGAAGGTAGCCTGTGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTTCAGTGCCAACCCCCTaGATGGCTTCCTTTATCTCA +
Preference number: 5 (lower is better)
Translates to: TRTCHQSQVDQASSQLMASVPTP*MASFIS
Trigger: TGAGATAAAGGAAGCCATCAAGGGGGTTGGCACTGA...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGATCTCGGATGTGCTCATaGCTGCGGGAAGCGAGGATC +
Preference number: 5 (lower is better)
Translates to: TGLSSRTVNLGAICGFVRSRMCS*LREARI
Trigger: GATCCTCGCTTCCCGCAGCAATGAGCACATCCGAGA...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGAGAACCGCATTGAACTaGGACTCGTCTGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLRTALN*DSSVPR
Trigger: CCTGGGAACAGACGAGTCCAAGTTCAATGCGGTTCT...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp TTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGCATTCTCTGGTACTCATaGAAAACTGCTACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: FFWPFPGTGVAGRWAEVSILWYS*KTATRW
Trigger: CCACCTGGTAGCAGTTTTCAATGAGTACCAGAGAAT...GCTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGTCGTGGTACAGCGACTaGCCGTACATCCGCTTATAC +
Preference number: 5 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLSWYSD*PYIRLY
Trigger: GTATAAGCGGATGTACGGCAAGTCGCTGTACCACGA...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATCGCAGAGCTGACGTGTaGACCAGGACCTGCCATCAA +
Preference number: 5 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYRRADV*TRTCHQ
Trigger: TTGATGGCAGGTCCTGGTCAACACGTCAGCTCTGCG...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGGCAGGAGAAGACCCATaGTGTTCTATCCCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSEAGEDP*CSIPER
Trigger: TCTTTCTGGGATAGAACACAATGGGTCTTCTCCTGC...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGCCACCAGTCACTGTTCAGTCATTGCCACCACAGATCTTCAGCAGAATCTTCCTCCACCCTAAGCAACTaGAGGGCAAGGCATGTGGCT +
Preference number: 5 (lower is better)
Translates to: SHQSLFSHCHHRSSAESSSTLSN*RARHVA
Trigger: AGCCACATGCCTTGCCCTCAAGTTGCTTAGGGTGGA...GGAAGATTCTGCTGAAGATCTGTGGTGGCAATGACTGAACAGTGACTGGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR CAA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTTCAGTGCCAACCCCCTaGATGGCTTCCTTTATCTCA +
Preference number: 5 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQASVPTP*MASFIS
Trigger: TGAGATAAAGGAAGCCATCAAGGGGGTTGGCACTGA...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTTTTCTCGGATGTGCTCATaGCTGCGGGAAGCGAGGATC +
Preference number: 5 (lower is better)
Translates to: GNWLCSRGFCKEDGRNDFSRMCS*LREARI
Trigger: GATCCTCGCTTCCCGCAGCAATGAGCACATCCGAGA...AAAGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CACTGTTCAGTCATTGCCACCACAGATCTTCAGCAGAATCTTCCGGTAATCCCCAGAACCGCATTGAACTaGGACTCGTCTGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: HCSVIATTDLQQNLPVIPRTALN*DSSVPR
Trigger: CCTGGGAACAGACGAGTCCAAGTTCAATGCGGTTCT...GGGGATTACCGGAAGATTCTGCTGAAGATCTGTGGTGGCAATGACTGAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS-3UTR CAA 90 bp ATTCTTTTGGCCTTTTCCTGGCACTGGTGTTGCCGGCAGGTGGGCAGAAGTGAGATTCTCTGGTACTCATaGAAAACTGCTACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ILLAFSWHWCCRQVGRSEILWYS*KTATRW
Trigger: CCACCTGGTAGCAGTTTTCAATGAGTACCAGAGAAT...CTCACTTCTGCCCACCTGCCGGCAACACCAGTGCCAGGAAAAGGCCAAAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATTCTGTAGGTGCAATATaGCCTGCTGGGCACCAGGCT +
Preference number: 5 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNSVGAI*PAGHQA
Trigger: AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGA...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTATCTGCTGCCGCTGCTaGTTGGAGCGACTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFICCRC*LERLPR
Trigger: CCTGGGGAGTCGCTCCAACAAGCAGCGGCAGCAGAT...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GGAGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTGTGACATGTCCACGTTaGTGCTTTCATCACGGTTTC +
Preference number: 5 (lower is better)
Translates to: GVSLAVTKLVTHSPDAQAVTCPR*CFHHGF
Trigger: GAAACCGTGATGAAAGCACAAACGTGGACATGTCAC...AGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGTCGTGGTACAGCGACTaGCCGTACATCCGCTTATAC +
Preference number: 5 (lower is better)
Translates to: RHIPQITRSPVTDRELALSWYSD*PYIRLY
Trigger: GTATAAGCGGATGTACGGCAAGTCGCTGTACCACGA...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGGCCCCCAGGGTCACCTaGAGTTCATGGCAAGTTGTA +
Preference number: 5 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQAPRVT*SSWQVV
Trigger: TACAACTTGCCATGAACTCAAGGTGACCCTGGGGGC...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTGCCTGGATATCCACCTaGGTCTATTCCTTGACCAAA +
Preference number: 5 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSAWIST*VYSLTK
Trigger: TTTGGTCAAGGAATAGACCAAGGTGGATATCCAGGC...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTAGTATACCTGGTGGGCTaGACTGACTCCTTTACTGAC +
Preference number: 5 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLVYLVG*TDSFTD
Trigger: GTCAGTAAAGGAGTCAGTCAAGCCCACCAGGTATAC...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS GCA 90 bp GCAGACAAGAGAAGAGAGTTTGTGCAGGGAAATTTCCAAATAAACTaGAATGGTAGCAGCTCCCAGGAATGTGCGTGCTCCCAGTTTCGG +
Preference number: 5 (lower is better)
Translates to: ADKRREFVQGNFQIN*NGSSSQECACSQFR
Trigger: CCGAAACTGGGAGCACGCACATTCCTGGGAGCTGCTACCATTGCAGTTTATTTGGAAATTTCCCTGCACAAACTCTCTTCTCTTGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474545.1
CDS-3UTR CAA 90 bp ACCAGGACCTGCCATCAATCTCAGGTAGACCAGGCTAGTTCTCAGCTCATGGCTTCATCAGAGCCAAGATaGTCTTCTCAAAGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: TRTCHQSQVDQASSQLMASSEPR*SSQSFL
Trigger: CAGGAAACTTTGAGAAGACAATCTTGGCTCTGATGA...AGCCATGAGCTGAGAACTAGCCTGGTCTACCTGAGATTGATGGCAGGTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ACTTTAGGACCATCTACCCAGCCACAGGGTGAGCACTCCAAGGTTTCTTTCTTATCAGTGCCAACCCCCTaGATGGCTTCCTTTATCTCA +
Preference number: 5 (lower is better)
Translates to: TLGPSTQPQGEHSKVSFLSVPTP*MASFIS
Trigger: TGAGATAAAGGAAGCCATCAAGGGGGTTGGCACTGA...TAAGAAAGAAACCTTGGAGTGCTCACCCTGTGGCTGGGTAGATGGTCCTAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp ACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAGAGCACAGAACCGCATaGAACTTGGACTCGTCTGTT +
Preference number: 5 (lower is better)
Translates to: TGLSSRTVNLGAICGFVREHRTA*NLDSSV
Trigger: AACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCTC...TCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTGAGCACAGAACCGCATaGAACTTGGACTCGTCTGTT +
Preference number: 5 (lower is better)
Translates to: ETKVNVSVGAILPAGHQAEHRTA*NLDSSV
Trigger: AACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCTC...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp TGGAAGGCAGTAGGTGCCTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTATTCTCTGGTACTCATaGAAAACTGCTACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: WKAVGAFASGKIMRHSCSILWYS*KTATRW
Trigger: CCACCTGGTAGCAGTTTTCAATGAGTACCAGAGAAT...ACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAGGCACCTACTGCCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGAGGATGGGGCTTCAGCTaGGGCTTGAGGCATGGACTC +
Preference number: 5 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGGWGFS*GLRHGL
Trigger: GAGTCCATGCCTCAAGCCCAAGCTGAAGCCCCATCC...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTTCACATCAGAGCACATaGGTTCTAGGCCCCATCACA +
Preference number: 5 (lower is better)
Translates to: ETKVNVSVGAILPAGHQASHQST*VLGPIT
Trigger: TGTGATGGGGCCTAGAACCAATGTGCTCTGATGTGA...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTAGTTCTCAGCTCATGGCTGCTCCACACCCTTCGGATGTCATTCTTCCTTTATTCACATCAGAGCACATaGGTTCTAGGCCCCATCACA +
Preference number: 5 (lower is better)
Translates to: LVLSSWLLHTLRMSFFLYSHQST*VLGPIT
Trigger: TGTGATGGGGCCTAGAACCAATGTGCTCTGATGTGA...ATAAAGGAAGAATGACATCCGAAGGGTGTGGAGCAGCCATGAGCTGAGAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AAGACAGGCCTAAGCTCTAGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTTCACATCAGAGCACATaGGTTCTAGGCCCCATCACA +
Preference number: 5 (lower is better)
Translates to: KTGLSSRTVNLGAICGFVSHQST*VLGPIT
Trigger: TGTGATGGGGCCTAGAACCAATGTGCTCTGATGTGA...AACAAATCCACAAATAGCCCCGAGATTCACCGTCCTAGAGCTTAGGCCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGTGAGTTTGGCAGTAACAAAGCTCGTGACACACTCACCAGATGCACAGGCTACGCAGGAGAAGACCCATaGTGTTCTATCCCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SEFGSNKARDTLTRCTGYAGEDP*CSIPER
Trigger: TCTTTCTGGGATAGAACACAATGGGTCTTCTCCTGC...GTAGCCTGTGCATCTGGTGAGTGTGTCACGAGCTTTGTTACTGCCAAACTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CCCAGTCGCCCTCACCAGAAATGTGTATGCAGCAAACAGACTTGTATGCCTCTGTCATCAGAGCCAAGATaGTCTTCTCAAAGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: PSRPHQKCVCSKQTCMPLSSEPR*SSQSFL
Trigger: CAGGAAACTTTGAGAAGACAATCTTGGCTCTGATGA...CAGAGGCATACAAGTCTGTTTGCTGCATACACATTTCTGGTGAGGGCGACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp TCTTTCTTAAATTTTGCACCTGAGACAAATGCCACCAGGACTAGGGTGAGGCGATCAGTGCCAACCCCCTaGATGGCTTCCTTTATCTCA +
Preference number: 5 (lower is better)
Translates to: SFLNFAPETNATRTRVRRSVPTP*MASFIS
Trigger: TGAGATAAAGGAAGCCATCAAGGGGGTTGGCACTGA...TCGCCTCACCCTAGTCCTGGTGGCATTTGTCTCAGGTGCAAAATTTAAGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTGTGACATGTCCACGTTaGTGCTTTCATCACGGTTTC +
Preference number: 5 (lower is better)
Translates to: QGTGFVLVVSARKMEGMTVTCPR*CFHHGF
Trigger: GAAACCGTGATGAAAGCACAAACGTGGACATGTCAC...AGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGTGACATGTCCACGTTaGTGCTTTCATCACGGTTTC +
Preference number: 5 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNVTCPR*CFHHGF
Trigger: GAAACCGTGATGAAAGCACAAACGTGGACATGTCAC...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CCATTCCAGAGCTGGCTGACTCTTAATGTGGAAACAAGTTTTGGCTACAGACATAGAACCGCATTGAACTaGGACTCGTCTGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PFQSWLTLNVETSFGYRHRTALN*DSSVPR
Trigger: CCTGGGAACAGACGAGTCCAAGTTCAATGCGGTTCT...ATGTCTGTAGCCAAAACTTGTTTCCACATTAAGAGTCAGCCAGCTCTGGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTGGCGGGCCATAGGCAGGTAAAATGTAGTTTTATTCAGCAGCTATCTCATCAGGTCACTGTTCAGTCATaGCCACCACAGATCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LAGHRQVKCSFIQQLSHQVTVQS*PPQIFS
Trigger: GCTGAAGATCTGTGGTGGCAATGACTGAACAGTGAC...CTGATGAGATAGCTGCTGAATAAAACTACATTTTACCTGCCTATGGCCCGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTGACAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATATGCAGCAAACAGACTaGTATGCCTCTGTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: LTGNWLCSRGFCKEDGRNMQQTD*YASVWQ
Trigger: TTGCCAGACAGAGGCATACAAGTCTGTTTGCTGCAT...ATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTCCTCAACGCAGGAGGTaGGAAAAGGAGTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFPQRRR*EKEWVE
Trigger: CTCCACCCACTCCTTTTCCAACCTCCTGCGTTGAGG...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp GAAACCAAAGTAAATGTGTCTGTAGGTGCAATATTGCCTGCTGGGCACCAGGCTGCCTGGATATCCACCTaGGTCTATTCCTTGACCAAA +
Preference number: 5 (lower is better)
Translates to: ETKVNVSVGAILPAGHQAAWIST*VYSLTK
Trigger: TTTGGTCAAGGAATAGACCAAGGTGGATATCCAGGC...AGCCTGGTGCCCAGCAGGCAATATTGCACCTACAGACACATTTACTTTGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CAGGGAACTGGCTTTGTTCTCGTGGTTTCTGCAAGGAAGATGGAAGGAATGACTGCAGGAGAAGACCCATaGTGTTCTATCCCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: QGTGFVLVVSARKMEGMTAGEDP*CSIPER
Trigger: TCTTTCTGGGATAGAACACAATGGGTCTTCTCCTGC...AGTCATTCCTTCCATCTTCCTTGCAGAAACCACGAGAACAAAGCCAGTTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTTTGCCTCTGGGAAGATCATGAGGCATTCATGCAGTCCTCCAGCCCATACTTACCTTATTTGCTGCTTTaGTGGAAGGACAGACTTGTG +
Preference number: 5 (lower is better)
Translates to: LCLWEDHEAFMQSSSPYLPYLLL*WKDRLV
Trigger: CACAAGTCTGTCCTTCCACAAAAGCAGCAAATAAGG...TAAGTATGGGCTGGAGGACTGCATGAATGCCTCATGATCTTCCCAGAGGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGGCACATACCACAAATTACAAGAAGCCCTGTCACTGACAGGGAACTGGCTTTGATTCTCTGGTACTCATaGAAAACTGCTACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RHIPQITRSPVTDRELALILWYS*KTATRW
Trigger: CCACCTGGTAGCAGTTTTCAATGAGTACCAGAGAAT...CAAAGCCAGTTCCCTGTCAGTGACAGGGCTTCTTGTAATTTGTGGTATGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTAAGGCTGGGGTATTCTaGAGACATTTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFKAGVF*RHFTTA
Trigger: GGCCGTGGTGAAATGTCTCAAGAATACCCCAGCCTT...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS-3UTR CAA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGAGTATACCTGGTGGGCTaGACTGACTCCTTTACTGAC +
Preference number: 5 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGVYLVG*TDSFTD
Trigger: GTCAGTAAAGGAGTCAGTCAAGCCCACCAGGTATAC...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATGAGCACAGAACCGCATaGAACTTGGACTCGTCTGTT +
Preference number: 5 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHEHRTA*NLDSSV
Trigger: AACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCTC...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATGTCACTGTTCAGTCATaGCCACCACAGATCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHVTVQS*PPQIFS
Trigger: GCTGAAGATCTGTGGTGGCAATGACTGAACAGTGAC...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AGGACGGTGAATCTCGGGGCTATTTGTGGATTTGTTAGAAACAGACATTCTTTTGCCTGGATATCCACCTaGGTCTATTCCTTGACCAAA +
Preference number: 5 (lower is better)
Translates to: RTVNLGAICGFVRNRHSFAWIST*VYSLTK
Trigger: TTTGGTCAAGGAATAGACCAAGGTGGATATCCAGGC...AAAAGAATGTCTGTTTCTAACAAATCCACAAATAGCCCCGAGATTCACCGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CTTAGGTATTCACCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATATGCAGCAAACAGACTaGTATGCCTCTGTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: LRYSPDCCKLSIRFQSSHMQQTD*YASVWQ
Trigger: TTGCCAGACAGAGGCATACAAGTCTGTTTGCTGCAT...ATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGGTGAATACCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp AATATACAATTACATGACGAAATGAAGCCAAGTCTTAGCCACAGGCAAAGGGGATCATCAGAGCCAAGATaGTCTTCTCAAAGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: NIQLHDEMKPSLSHRQRGSSEPR*SSQSFL
Trigger: CAGGAAACTTTGAGAAGACAATCTTGGCTCTGATGA...TCCCCTTTGCCTGTGGCTAAGACTTGGCTTCATTTCGTCATGTAATTGTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS-3UTR CAA 90 bp CCTGATTGCTGTAAACTTTCAATTCGTTTCCAGAGTTCCCATAAATTTGAGTTTCCTTATTTGCTGCTTTaGTGGAAGGACAGACTTGTG +
Preference number: 5 (lower is better)
Translates to: PDCCKLSIRFQSSHKFEFPYLLL*WKDRLV
Trigger: CACAAGTCTGTCCTTCCACAAAAGCAGCAAATAAGG...AAACTCAAATTTATGGGAACTCTGGAAACGAATTGAAAGTTTACAGCAATCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS CCA 72 bp CCGGACGCGAGGGGCGAAATGGGACGTGGGCGGGAGTaGCTCTCTCCGCGGGCGTCCCGGGCGCGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: PDARGEMGRGRE*LSPRASRARRL
Trigger: CAGGCGCCGCGCCCGGGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000463657.1
CDS CCA 72 bp AGTGGCTCTCTCCGCGGGCGTCCCGGGCGCGGCGCCTaGGTTCTGCCTAGGGGCTGGGTCCCACTCCCGCTC +
Preference number: 6 (lower is better)
Translates to: SGSLRGRPGRGA*VLPRGWVPLPL
Trigger: GAGCGGGAGTGGGACCCAGCCCCTAGGCAGAACCCAGGCGCCGCGCCCGGGACGCCCGCGGAGAGAGCCACT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000463657.1
CDS CCA 72 bp CACGGGGACTCCGGACGCGAGGGGCGAAATGGGACGTaGGCGGGAGTGGCTCTCTCCGCGGGCGTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: HGDSGREGRNGT*AGVALSAGVPG
Trigger: GCCCGGGACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000463657.1
CDS CCA 72 bp CCCTGGCCACGGGGACTCCGGACGCGAGGGGCGAAATaGGACGTGGGCGGGAGTGGCTCTCTCCGCGGGCGT +
Preference number: 6 (lower is better)
Translates to: PWPRGLRTRGAK*DVGGSGSLRGR
Trigger: ACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGTGGCCAGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438331.5
ENST00000463657.1
CDS CCA 72 bp ACCTGGCCACGGGGACTCCGGACGCGAGGGGCGAAATaGGACGTGGGCGGGAGTGGCTCTCTCCGCGGGCGT +
Preference number: 6 (lower is better)
Translates to: TWPRGLRTRGAK*DVGGSGSLRGR
Trigger: ACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGTGGCCAGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422982.8
CDS CCA 72 bp ATCTGGCCACGGGGACTCCGGACGCGAGGGGCGAAATaGGACGTGGGCGGGAGTGGCTCTCTCCGCGGGCGT +
Preference number: 6 (lower is better)
Translates to: IWPRGLRTRGAK*DVGGSGSLRGR
Trigger: ACGCCCGCGGAGAGAGCCACTCCCGCCCACGTCCCATTTCGCCCCTCGCGTCCGGAGTCCCCGTGGCCAGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372231.7
CDS CCA 72 bp CACAGCGGGGGTGACAGTCCCAGACCCCGGGTATCCTaGGTAGCTCGGCACTGGCTGCTGCTGCCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: HSGGDSPRPRVS*VARHWLLLPRE
Trigger: CTCCCTGGGCAGCAGCAGCCAGTGCCGAGCTACCCAGGATACCCGGGGTCTGGGACTGTCACCCCCGCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000481805.1
CDS CCA 72 bp ACTGCCCCGCATAGGTGGCCACGTTATCCAGCCCGATaGGGGGCATGCTGGGCGGAGGAGGGTAGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: TAPHRWPRYPAR*GACWAEEGRQH
Trigger: GTGCTGCCTACCCTCCTCCGCCCAGCATGCCCCCCATCGGGCTGGATAACGTGGCCACCTATGCGGGGCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000437799.1
ENST00000438331.5
CDS CCA 72 bp AGTCCCAGACCCCGGGTATCCTGGGTAGCTCGGCACTaGCTGCTGCTGCCCAGGGAGTGGCACTGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SPRPRVSWVARH*LLLPREWHWRL
Trigger: CAGCCTCCAGTGCCACTCCCTGGGCAGCAGCAGCCAGTGCCGAGCTACCCAGGATACCCGGGGTCTGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000481805.1
CDS CAA 72 bp TGGGCCCGGCTCCGGGAGCACAGAACCGCATTGAACTaGGACTCGTCTGTTCCCAGGCGGTTCTCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: WARLREHRTALN*DSSVPRRFSPA
Trigger: GGCCGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCTCCCGGAGCCGGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS CAA 90 bp GCTACCAGGTGGGCCCGGCTCCGGGAGCACAGAACCGCATTGAACTaGGACTCGTCTGTTCCCAGGCGGTTCTCCCCGGCCGCATACAGC +
Preference number: 6 (lower is better)
Translates to: ATRWARLREHRTALN*DSSVPRRFSPAAYS
Trigger: GCTGTATGCGGCCGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCTCCCGGAGCCGGGCCCACCTGGTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS TCA 72 bp CCAGGTGGGCCCGGCTCCGGGAGCACAGAACCGCATTaGACTTGGACTCGTCTGTTCCCAGGCGGTTCTCCC +
Preference number: 6 (lower is better)
Translates to: PGGPGSGSTEPH*TWTRLFPGGSP
Trigger: GGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCTCCCGGAGCCGGGCCCACCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS GCA 72 bp CTCCCCAGGGACCACCACCTGCAGGGCTCAGCTGGGTaGCCGATGGGCATTCGACATCATCATGGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: LPRDHHLQGSAG*PMGIRHHHGAS
Trigger: AGAGGCCCCATGATGATGTCGAATGCCCATCGGGCACCCAGCTGAGCCCTGCAGGTGGTGGTCCCTGGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS TCA 72 bp CGGCATCTCGCAGGGGGTCAAAGCCGGGAGCATCAGTaGTGGTGCCTCGGCTTCCAAACTGGGTTGGGGGCA +
Preference number: 6 (lower is better)
Translates to: RHLAGGQSREHQ*WCLGFQTGLGA
Trigger: TGCCCCCAACCCAGTTTGGAAGCCGAGGCACCATCACTGATGCTCCCGGCTTTGACCCCCTGCGAGATGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000481805.1
CDS CAA 72 bp ACCAGGTGGGCCCGGCTCCGGGAGCACAGAACCGCATaGAACTTGGACTCGTCTGTTCCCAGGCGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: TRWARLREHRTA*NLDSSVPRRFS
Trigger: GGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCTCCCGGAGCCGGGCCCACCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS CAA 90 bp AAAACTGCTACCAGGTGGGCCCGGCTCCGGGAGCACAGAACCGCATaGAACTTGGACTCGTCTGTTCCCAGGCGGTTCTCCCCGGCCGCA +
Preference number: 6 (lower is better)
Translates to: KTATRWARLREHRTA*NLDSSVPRRFSPAA
Trigger: TGCGGCCGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAATGCGGTTCTGTGCTCCCGGAGCCGGGCCCACCTGGTAGCAGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS TCA 72 bp CCCCCACCCCGCAGCTCGCCTTGCCGTAAGCCGTCTTaGAGGAAAGTAGGATCTGCTGCCGCTGCTTGTTGG +
Preference number: 6 (lower is better)
Translates to: PPPRSSPCRKPS*RKVGSAAAACW
Trigger: CCAACAAGCAGCGGCAGCAGATCCTACTTTCCTTCAAGACGGCTTACGGCAAGGCGAGCTGCGGGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481805.1
CDS GCA 72 bp CCTCAGCACCCGGTGGCATCCTTCACCTCCCAACGATaGCACCAGCTGGATGGGCAGAAGGAAATGCCCTCC +
Preference number: 6 (lower is better)
Translates to: PQHPVASFTSQR*HQLDGQKEMPS
Trigger: GGAGGGCATTTCCTTCTGCCCATCCAGCTGGTGGCATCGTTGGGAGGTGAAGGATGCCACCGGGTGCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481805.1
CDS TCA 72 bp GCCGCTGCTTGTTGGAGCGACTCCCCAGGCAGTCAATaGTGGCCTGCTCATCCGTCCCGAAGCCTTTCATGG +
Preference number: 6 (lower is better)
Translates to: AAACWSDSPGSQ*WPAHPSRSLSW
Trigger: CCATGAAAGGCTTCGGGACGGATGAGCAGGCCATCATTGACTGCCTGGGGAGTCGCTCCAACAAGCAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000481805.1
CDS GCA 72 bp TGCCCTCCTCCAGGTCCCCGGACATCTCCCGGCAGATaGTCTTCTCAATGTCCCGGCCTGTCATTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: CPPPGPRTSPGR*SSQCPGLSFSG
Trigger: ACCAGAGAATGACAGGCCGGGACATTGAGAAGAGCATCTGCCGGGAGATGTCCGGGGACCTGGAGGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS CCA 72 bp GATGTCTGGAGCCTCTCAGCAAACCTCAGCACCCGGTaGCATCCTTCACCTCCCAACGATGCCACCAGCTGG +
Preference number: 6 (lower is better)
Translates to: DVWSLSANLSTR*HPSPPNDATSW
Trigger: CCAGCTGGTGGCATCGTTGGGAGGTGAAGGATGCCACCGGGTGCTGAGGTTTGCTGAGAGGCTCCAGACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481805.1
CDS CCA 72 bp CGGTGGCATCCTTCACCTCCCAACGATGCCACCAGCTaGATGGGCAGAAGGAAATGCCCTCCTGCTCCTTAC +
Preference number: 6 (lower is better)
Translates to: RWHPSPPNDATS*MGRRKCPPAPY
Trigger: GTAAGGAGCAGGAGGGCATTTCCTTCTGCCCATCCAGCTGGTGGCATCGTTGGGAGGTGAAGGATGCCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481805.1
CDS TCA 72 bp ACATGTTGGCCGCCATTCCCGAGAGATAGTCCTGGTTaGACTGCCCCGCATAGGTGGCCACGTTATCCAGCC +
Preference number: 6 (lower is better)
Translates to: TCWPPFPRDSPG*TAPHRWPRYPA
Trigger: GGCTGGATAACGTGGCCACCTATGCGGGGCAGTTCAACCAGGACTATCTCTCGGGAATGGCGGCCAACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000437799.1
ENST00000438331.5
CDS CCA 72 bp GGCATCCTTCACCTCCCAACGATGCCACCAGCTGGATaGGCAGAAGGAAATGCCCTCCTGCTCCTTACTGTC +
Preference number: 6 (lower is better)
Translates to: GILHLPTMPPAG*AEGNALLLLTV
Trigger: GACAGTAAGGAGCAGGAGGGCATTTCCTTCTGCCCATCCAGCTGGTGGCATCGTTGGGAGGTGAAGGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481805.1
CDS CAA 72 bp GCCGTCTTGAAGGAAAGTAGGATCTGCTGCCGCTGCTaGTTGGAGCGACTCCCCAGGCAGTCAATGATGGCC +
Preference number: 6 (lower is better)
Translates to: AVLKESRICCRC*LERLPRQSMMA
Trigger: GGCCATCATTGACTGCCTGGGGAGTCGCTCCAACAAGCAGCGGCAGCAGATCCTACTTTCCTTCAAGACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000481805.1
CDS TCA 72 bp CTGAGAGAGAGAGATGAGGAGCCGCTGGAAGTGCCCTaGTGTGTCGCTTCGAATGGCCTCTTCCAGGGTCTT +
Preference number: 6 (lower is better)
Translates to: LRERDEEPLEVP*CVASNGLFQGL
Trigger: AAGACCCTGGAAGAGGCCATTCGAAGCGACACATCAGGGCACTTCCAGCGGCTCCTCATCTCTCTCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS TCA 72 bp GGCCGCATACAGCTCCTGGGCATCTCTCTGGGCGAGTaGCATGTCCACGTTTGTGCTTTCATCACGGTTTCC +
Preference number: 6 (lower is better)
Translates to: GRIQLLGISLGE*HVHVCAFITVS
Trigger: GGAAACCGTGATGAAAGCACAAACGTGGACATGTCACTCGCCCAGAGAGATGCCCAGGAGCTGTATGCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS CAA 72 bp GTCTTGAAGGAAAGTAGGATCTGCTGCCGCTGCTTGTaGGAGCGACTCCCCAGGCAGTCAATGATGGCCTGC +
Preference number: 6 (lower is better)
Translates to: VLKESRICCRCL*ERLPRQSMMAC
Trigger: GCAGGCCATCATTGACTGCCTGGGGAGTCGCTCCAACAAGCAGCGGCAGCAGATCCTACTTTCCTTCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000481805.1
CDS TCA 72 bp ACAGCGACTTGCCGTACATCCGCTTATACTCTGATCTaGTGTCCAGGAGGTCGGTCTCGCTGCGAGACACCA +
Preference number: 6 (lower is better)
Translates to: TATCRTSAYTLI*CPGGRSRCETP
Trigger: TGGTGTCTCGCAGCGAGACCGACCTCCTGGACATCAGATCAGAGTATAAGCGGATGTACGGCAAGTCGCTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS TCA 72 bp GTGGTACAGCGACTTGCCGTACATCCGCTTATACTCTaGTCTGATGTCCAGGAGGTCGGTCTCGCTGCGAGA +
Preference number: 6 (lower is better)
Translates to: VVQRLAVHPLIL*SDVQEVGLAAR
Trigger: TCTCGCAGCGAGACCGACCTCCTGGACATCAGATCAGAGTATAAGCGGATGTACGGCAAGTCGCTGTACCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
ENST00000447489.1
CDS CCA 72 bp CTCAGCTGGGTGCCCGATGGGCATTCGACATCATCATaGGGCCTCTGGCCTGTTAGATGCTTTCCTCTACAT +
Preference number: 6 (lower is better)
Translates to: LSWVPDGHSTSS*GLWPVRCFPLH
Trigger: ATGTAGAGGAAAGCATCTAACAGGCCAGAGGCCCCATGATGATGTCGAATGCCCATCGGGCACCCAGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS CCA 72 bp AGCCACCTGGGGGCGGGGGATAGCCAGGGTAGCTCATaGTTAGATCTGGAAGAGAAGACGAAAGCACATTCA +
Preference number: 6 (lower is better)
Translates to: SHLGAGDSQGSS*LDLEEKTKAHS
Trigger: TGAATGTGCTTTCGTCTTCTCTTCCAGATCTAACCATGAGCTACCCTGGCTATCCCCCGCCCCCAGGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437799.1
CDS TCA 72 bp CAGACACACACCCGCATGATGTCTTCTGCCATGTTATaGAGCAGCAAGAAGGCCCTTGCCAGATGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: QTHTRMMSSAML*SSKKALARCSL
Trigger: GAGGCTGCATCTGGCAAGGGCCTTCTTGCTGCTTCATAACATGGCAGAAGACATCATGCGGGTGTGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438331.5
ENST00000463657.1
CDS GCA 72 bp GTCTTCTGCCATGTTATGAAGCAGCAAGAAGGCCCTTaGCAGATGCAGCCTCACGATCTTCTCAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: VFCHVMKQQEGP*QMQPHDLLSLQ
Trigger: CTGGAGGCTGAGAAGATCGTGAGGCTGCATCTGGCAAGGGCCTTCTTGCTGCTTCATAACATGGCAGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438331.5
ENST00000463657.1
CDS GCA 72 bp GTCTCTTCCCCAGACACACACCCGCATGATGTCTTCTaGCATGTTATGAAGCAGCAAGAAGGCCCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: VSSPDTHPHDVF*HVMKQQEGPCQ
Trigger: CTGGCAAGGGCCTTCTTGCTGCTTCATAACATGGCAGAAGACATCATGCGGGTGTGTGTCTGGGGAAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438331.5
ENST00000463657.1
CDS CAA 72 bp CCTGGGCATCTCTCTGGGCGAGTGACATGTCCACGTTaGTGCTTTCATCACGGTTTCCCTGAGAGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: PGHLSGRVTCPR*CFHHGFPERER
Trigger: TCTCTCTCTCTCAGGGAAACCGTGATGAAAGCACAAACGTGGACATGTCACTCGCCCAGAGAGATGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS CAA 90 bp CTTGCTGGCATGCAGGAGATACTCGAGATGTCGTGGTACAGCGACTaGCCGTACATCCGCTTATACTCTGATCTGATGTCCAGGAGGTCG +
Preference number: 6 (lower is better)
Translates to: LAGMQEILEMSWYSD*PYIRLYSDLMSRRS
Trigger: CGACCTCCTGGACATCAGATCAGAGTATAAGCGGATGTACGGCAAGTCGCTGTACCACGACATCTCGAGTATCTCCTGCATGCCAGCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS TCA 72 bp GCGGGGGATAGCCAGGGTAGCTCATGGTTAGATCTTTaGCTCAGCAACTCCACTTCTGTAAGTCTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: AGDSQGSSWLDL*LSNSTSVSLFP
Trigger: GGGGAAGAGACTTACAGAAGTGGAGTTGCTGAGTCAAAGATCTAACCATGAGCTACCCTGGCTATCCCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422982.8
ENST00000438331.5
ENST00000463657.1
CDS GCA 72 bp CATTCGACATCATCATGGGGCCTCTGGCCTGTTAGATaGTTTCCTCTACATGGCAGCTTCGGATCGGCTCTT +
Preference number: 6 (lower is better)
Translates to: HSTSSWGLWPVR*FPLHGSFGSAL
Trigger: AAGAGCCGATCCGAAGCTGCCATGTAGAGGAAAGCATCTAACAGGCCAGAGGCCCCATGATGATGTCGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265447.8
CDS GCA 72 bp GGCAAGGCATGTGGCTTCTTCCAGATGTCCATAGCTTaGTGGCATGCAGGAGATACTCGAGATGTCGTGGTA +
Preference number: 6 (lower is better)
Translates to: GKACGFFQMSIA*WHAGDTRDVVV
Trigger: TACCACGACATCTCGAGTATCTCCTGCATGCCAGCAAGCTATGGACATCTGGAAGAAGCCACATGCCTTGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS CAA 72 bp TGTCTTCTGCCATGTTATGAAGCAGCAAGAAGGCCCTaGCCAGATGCAGCCTCACGATCTTCTCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: CLLPCYEAARRP*PDAASRSSQPP
Trigger: TGGAGGCTGAGAAGATCGTGAGGCTGCATCTGGCAAGGGCCTTCTTGCTGCTTCATAACATGGCAGAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438331.5
ENST00000463657.1
CDS GCA 72 bp ATGTGGCTTCTTCCAGATGTCCATAGCTTGCTGGCATaGAGGAGATACTCGAGATGTCGTGGTACAGCGACT +
Preference number: 6 (lower is better)
Translates to: MWLLPDVHSLLA*RRYSRCRGTAT
Trigger: AGTCGCTGTACCACGACATCTCGAGTATCTCCTGCATGCCAGCAAGCTATGGACATCTGGAAGAAGCCACAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS CCA 72 bp AAGGCATGTGGCTTCTTCCAGATGTCCATAGCTTGCTaGCATGCAGGAGATACTCGAGATGTCGTGGTACAG +
Preference number: 6 (lower is better)
Translates to: KACGFFQMSIAC*HAGDTRDVVVQ
Trigger: CTGTACCACGACATCTCGAGTATCTCCTGCATGCCAGCAAGCTATGGACATCTGGAAGAAGCCACATGCCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS CAA 72 bp CCTGAAGTATCTCCCGAGATGTCGTGGTACAGCGACTaGCCGTACATCCGCTTATACTCTGATCTGATGTCC +
Preference number: 6 (lower is better)
Translates to: PEVSPEMSWYSD*PYIRLYSDLMS
Trigger: GGACATCAGATCAGAGTATAAGCGGATGTACGGCAAGTCGCTGTACCACGACATCTCGGGAGATACTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS CAA 72 bp ATGCAGGAGATACTCGAGATGTCGTGGTACAGCGACTaGCCGTACATCCGCTTATACTCTGATCTGATGTCC +
Preference number: 6 (lower is better)
Translates to: MQEILEMSWYSD*PYIRLYSDLMS
Trigger: GGACATCAGATCAGAGTATAAGCGGATGTACGGCAAGTCGCTGTACCACGACATCTCGAGTATCTCCTGCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447489.1
CDS TCA 72 bp ACTTCTGTAAGTCTCTTCCCCAGACACACACCCGCATaGTGTCTTCTGCCATGTTATGAAGCAGCAAGAAGG +
Preference number: 6 (lower is better)
Translates to: TSVSLFPRHTPA*CLLPCYEAARR
Trigger: CCTTCTTGCTGCTTCATAACATGGCAGAAGACATCATGCGGGTGTGTGTCTGGGGAAGAGACTTACAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438331.5
ENST00000463657.1
CDS GCA 72 bp AGAAGAGAGTTTGTGCAGGGAAATTTCCAAATAAACTaGAATGGTAGCAGCTCCCAGGAATGTGCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: RREFVQGNFQIN*NGSSSQECACS
Trigger: GGAGCACGCACATTCCTGGGAGCTGCTACCATTGCAGTTTATTTGGAAATTTCCCTGCACAAACTCTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474545.1
CDS CCA 72 bp GATGGCTTCCTTTATCTCATAAATGTCAAAGAGGACTaGGGTCTTCATCAGAGCCAAGATTGTCTTCTCAAA +
Preference number: 6 (lower is better)
Translates to: DGFLYLINVKED*GLHQSQDCLLK
Trigger: TTTGAGAAGACAATCTTGGCTCTGATGAAGACCCCAGTCCTCTTTGACATTTATGAGATAAAGGAAGCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265447.8
ENST00000372231.7
ENST00000422982.8
ENST00000438331.5
CDS CAA 72 bp CTCAGCCTCCAGAACTGTGAGCCAAATAAGCTACTATaGCTTATAAATTACTCAGTCTGTGATATTTTGTTA +
Preference number: 6 (lower is better)
Translates to: LSLQNCEPNKLL*LINYSVCDILL
Trigger: TAACAAAATATCACAGACTGAGTAATTTATAAGCAATAGTAGCTTATTTGGCTCACAGTTCTGGAGGCTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438331.5
ENST00000463657.1