RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANPEP (Homo sapiens)

Ensembl gene IDs: ENSG00000166825

Ensembl transcript IDs: ENST00000300060.7, ENST00000558177.5, ENST00000558740.1, ENST00000559761.5, ENST00000559874.2, ENST00000559887.1, ENST00000560028.1, ENST00000560030.1, ENST00000560137.2, ENST00000679248.1

Found 829 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATaGACACATGTGGGCACCTTGCATGGGGGCCGGGTGACTTCAAGG +
Preference number: 1 (lower is better)
Translates to: VPRAPGMEALHQPLG*THVGTLHGGRVTSR
Trigger: CCTTGAAGTCACCCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR TCA 90 bp TCCATCGAGAGCTTCTGCTCATCTGGCCCTGGAGCTGGGCTTCCCTaGGATCAGCCCCAGGGCACTGGGCGACAGGTGCCATGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: SIESFCSSGPGAGLP*DQPQGTGRQVPCQA
Trigger: GGCCTGGCATGGCACCTGTCGCCCAGTGCCCTGGGGCTGATCTCAGGGAAGCCCAGCTCCAGGGCCAGATGAGCAGAAGCTCTCGATGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR CCA 90 bp TGGGGCCCGTCACGTTCAGGGCATAATCGCCGTGGCCCGCCGCAATaGCACTGGGCCGGGCCCAGATCCGGATCTGAAATCACTCAGAGG +
Preference number: 1 (lower is better)
Translates to: WGPSRSGHNRRGPPQ*HWAGPRSGSEITQR
Trigger: CCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGAACGTGACGGGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560028.1
3UTR GCA 90 bp AGGGTCCCCGTGCTGGTATCCACCGTGATGACCGGGAAGCCCATCTaGAGGGTCCAGCGGTTCATGATGTCCCGCACGGTGGTGGGGAGT +
Preference number: 1 (lower is better)
Translates to: RVPVLVSTVMTGKPI*RVQRFMMSRTVVGS
Trigger: ACTCCCCACCACCGTGCGGGACATCATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGTCATCACGGTGGATACCAGCACGGGGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTaGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCTGG +
Preference number: 1 (lower is better)
Translates to: QRERGLETLSLRGGH*CLGLQEWRPCTSRW
Trigger: CCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR CCA 90 bp ACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATaGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCT +
Preference number: 1 (lower is better)
Translates to: TLSLRGGHWCLGLQE*RPCTSRWDGHMWAP
Trigger: AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR CCA 90 bp CCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTaGCCCTGGAGCTGGGCTTCCCTGAGATCAGCCCCAGGGCACTGG +
Preference number: 1 (lower is better)
Translates to: PPARPFIVHRELLLI*PWSWASLRSAPGHW
Trigger: CCAGTGCCCTGGGGCTGATCTCAGGGAAGCCCAGCTCCAGGGCCAGATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR CCA 90 bp CCGTCACGTTCAGGGCATAATCGCCGTGGCCCGCCGCAATGGCACTaGGCCGGGCCCAGATCCGGATCTGAAATCACTCAGAGGTGGGAT +
Preference number: 1 (lower is better)
Translates to: PSRSGHNRRGPPQWH*AGPRSGSEITQRWD
Trigger: ATCCCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGAACGTGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
3UTR CCA 90 bp TGCAGGGTCCAGCGGTTCATGATGTCCCGCACGGTGGTGGGGAGTTaGATGGACCGGTTGTTCACAGCCTCCTGCAGGTGGTCCCACAGG +
Preference number: 1 (lower is better)
Translates to: CRVQRFMMSRTVVGS*MDRLFTASCRWSHR
Trigger: CCTGTGGGACCACCTGCAGGAGGCTGTGAACAACCGGTCCATCCAACTCCCCACCACCGTGCGGGACATCATGAACCGCTGGACCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR CCA 90 bp GCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTGGCCCTaGAGCTGGGCTTCCCTGAGATCAGCCCCAGGGCACTGGGCGACA +
Preference number: 1 (lower is better)
Translates to: ARPFIVHRELLLIWP*SWASLRSAPGHWAT
Trigger: TGTCGCCCAGTGCCCTGGGGCTGATCTCAGGGAAGCCCAGCTCCAGGGCCAGATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR TCA 90 bp CCGTGGCCCGCCGCAATGGCACTGGGCCGGGCCCAGATCCGGATCTaGAATCACTCAGAGGTGGGATTCCAACCCTGGCCTAACAATTCA +
Preference number: 1 (lower is better)
Translates to: PWPAAMALGRAQIRI*NHSEVGFQPWPNNS
Trigger: TGAATTGTTAGGCCAGGGTTGGAATCCCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
3UTR TCA 90 bp TCTCCCGGTAGGTCACCAGTCCCCAGTTCTCCATGGCGCCGGCGTTaGAGTCTGGCAGGCCAATCTGGTCTGATTTTGGGAGTGGGTAGG +
Preference number: 1 (lower is better)
Translates to: SPGRSPVPSSPWRRR*SLAGQSGLILGVGR
Trigger: CCTACCCACTCCCAAAATCAGACCAGATTGGCCTGCCAGACTTCAACGCCGGCGCCATGGAGAACTGGGGACTGGTGACCTACCGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560028.1
3UTR GCA 90 bp GACCTTATGGGCACTGGCCAGGTTGAAGGCGTCATTAATGATCTGTaGCCGATTGATGACAGGGATGGCCGAGTGGTCTCTCTGCAGCTG +
Preference number: 1 (lower is better)
Translates to: DLMGTGQVEGVINDL*PIDDRDGRVVSLQL
Trigger: CAGCTGCAGAGAGACCACTCGGCCATCCCTGTCATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGCCAGTGCCCATAAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR-3UTR CCA 90 bp GCTGCTGGAGGAGGACAGGGGGTCGAACAGCAGGGAGTTCTCCCGGTAGGTCACCGTGGCCCGCCGCAATaGCACTGGGCCGGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: AAGGGQGVEQQGVLPVGHRGPPQ*HWAGPR
Trigger: TCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACG...GTGACCTACCGGGAGAACTCCCTGCTGTTCGACCCCCTGTCCTCCTCCAGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560028.1
3UTR CAA 90 bp CTGCAGGGTCCAGCGGTTCATGATGTCCCGCACGGTGGTGGGGAGTaGGATGGACCGGTTGTTCACAGCCTCCTGCAGGTGGTCCCACAG +
Preference number: 2 (lower is better)
Translates to: LQGPAVHDVPHGGGE*DGPVVHSLLQVVPQ
Trigger: CTGTGGGACCACCTGCAGGAGGCTGTGAACAACCGGTCCATCCAACTCCCCACCACCGTGCGGGACATCATGAACCGCTGGACCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR-3UTR TCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTGGAGCTGGGCTTCCCTaGGATCAGCCCCAGGGCACT +
Preference number: 2 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAGAGLP*DQPQGT
Trigger: AGTGCCCTGGGGCTGATCTCAGGGAAGCCCAGCTCC...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCGCAGGGGCTGGGAGGTaGTCAGGCAGCCTGGGTCAT +
Preference number: 2 (lower is better)
Translates to: TGRPPARPFIVHRELLLIAGAGR*SGSLGH
Trigger: ATGACCCAGGCTGCCTGAGCACCTCCCAGCCCCTGC...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR GCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTGCAGGGGCTGGGAGGTaGTCAGGCAGCCTGGGTCAT +
Preference number: 2 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAAGAGR*SGSLGH
Trigger: ATGACCCAGGCTGCCTGAGCACCTCCCAGCCCCTGC...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR CAA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTaGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: RLAHRQRERGLETLS*RGGHWCLGLQEWRP
Trigger: GGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR GCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGCAGGGGCTGGGAGGTaGTCAGGCAGCCTGGGTCAT +
Preference number: 2 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRAGAGR*SGSLGH
Trigger: ATGACCCAGGCTGCCTGAGCACCTCCCAGCCCCTGC...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCACCAGCCGCTGGGATaGACACATGTGGGCACCTTG +
Preference number: 2 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAHQPLG*THVGTL
Trigger: CAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTG...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGACCCTGCACCAGCCGCTaGGATGGACACATGTGGGCA +
Preference number: 2 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRPCTSR*DGHMWA
Trigger: TGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGG...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp TCAGGGCATAATCGCCGTGGCCCGCCGCAATGGCACTGGGCCGGGCCCAGATCCGAAATCACTCAGAGGTaGGATTCCAACCCTGGCCTA +
Preference number: 2 (lower is better)
Translates to: SGHNRRGPPQWHWAGPRSEITQR*DSNPGL
Trigger: TAGGCCAGGGTTGGAATCCCACCTCTGAGTGATTTC...GGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
3UTR-3UTR TCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTGGAGCTGGGCTTCCCTaGGATCAGCCCCAGGGCACT +
Preference number: 2 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCGAGLP*DQPQGT
Trigger: AGTGCCCTGGGGCTGATCTCAGGGAAGCCCAGCTCC...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATGTGGGCACCTTGCATaGGGGCCGGGTGACTTCAAG +
Preference number: 2 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSCGHLA*GPGDFK
Trigger: CTTGAAGTCACCCGGCCCCCATGCAAGGTGCCCACA...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGATGTGGGCACCTTGCATaGGGGCCGGGTGACTTCAAG +
Preference number: 2 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRCGHLA*GPGDFK
Trigger: CTTGAAGTCACCCGGCCCCCATGCAAGGTGCCCACA...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGTGGGATGGACACATGTaGGCACCTTGCATGGGGGCC +
Preference number: 2 (lower is better)
Translates to: RERGLETLSLRGGHWCLGWDGHM*APCMGA
Trigger: GGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCA...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCTGCTCATCTGGCCCTaGAGCTGGGCTTCCCTGAGA +
Preference number: 2 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRALLIWP*SWASLR
Trigger: TCTCAGGGAAGCCCAGCTCCAGGGCCAGATGAGCAG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR CAA 90 bp GGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTaGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGG +
Preference number: 2 (lower is better)
Translates to: GTRLAHRQRERGLET*SLRGGHWCLGLQEW
Trigger: CCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR TCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTGGAGACTTTGTCCTTaGGGGGAGGACACTGGTGCC +
Preference number: 2 (lower is better)
Translates to: TGRPPARPFIVHRELLLIWRLCP*GEDTGA
Trigger: GGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCA...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCACCAGCCGCTGGGATaGACACATGTGGGCACCTTG +
Preference number: 2 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSHQPLG*THVGTL
Trigger: CAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCACCAGCCGCTGGGATaGACACATGTGGGCACCTTG +
Preference number: 2 (lower is better)
Translates to: QRERGLETLSLRGGHWCLHQPLG*THVGTL
Trigger: CAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCCTGCACCAGCCGCTaGGATGGACACATGTGGGCA +
Preference number: 2 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCPCTSR*DGHMWA
Trigger: TGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCTGCTCATCTGGCCCTaGAGCTGGGCTTCCCTGAGA +
Preference number: 2 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSLLIWP*SWASLR
Trigger: TCTCAGGGAAGCCCAGCTCCAGGGCCAGATGAGCAG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTGTGGGCACCTTGCATaGGGGCCGGGTGACTTCAAG +
Preference number: 2 (lower is better)
Translates to: GSSGTRLAHRQRERGLETCGHLA*GPGDFK
Trigger: CTTGAAGTCACCCGGCCCCCATGCAAGGTGCCCACA...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGATGTGGGCACCTTGCATaGGGGCCGGGTGACTTCAAG +
Preference number: 2 (lower is better)
Translates to: RLAHRQRERGLETLSLRGCGHLA*GPGDFK
Trigger: CTTGAAGTCACCCGGCCCCCATGCAAGGTGCCCACA...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGACACCAGCCGCTGGGATaGACACATGTGGGCACCTTG +
Preference number: 2 (lower is better)
Translates to: RLAHRQRERGLETLSLRGHQPLG*THVGTL
Trigger: CAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTG...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp TCCACCGTGATGACCGGGAAGCCCATCTGCAGGGTCCAGCGGTTCATGATGTCCTGGTGGGGAGTTGGATaGACCGGTTGTTCACAGCCT +
Preference number: 2 (lower is better)
Translates to: STVMTGKPICRVQRFMMSWWGVG*TGCSQP
Trigger: AGGCTGTGAACAACCGGTCCATCCAACTCCCCACCA...GGACATCATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGTCATCACGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR-3UTR CCA 90 bp GCCAGGTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGACAGGGATGGCCTGTCCCGCACGGTGGTaGGGAGTTGGATGGACCGGT +
Preference number: 2 (lower is better)
Translates to: ARLKASLMICARLMTGMACPARW*GVGWTG
Trigger: ACCGGTCCATCCAACTCCCCACCACCGTGCGGGACA...GGCCATCCCTGTCATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR-3UTR TCA 90 bp CAGGAAGAGGGTGTTGTTCAGCGCCAGAGTGACAGGGACCTTATGGGCACTGGCAATAGCCCGTCACATTaGGGTTCAGCAGGACCCACT +
Preference number: 2 (lower is better)
Translates to: QEEGVVQRQSDRDLMGTGNSPSH*GSAGPT
Trigger: AGTGGGTCCTGCTGAACCTCAATGTGACGGGCTATT...GCCAGTGCCCATAAGGTCCCTGTCACTCTGGCGCTGAACAACACCCTCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR-3UTR CCA 90 bp GAAGTTAAGGATGGGGCCCGTCACGTTCAGGGCATAATCGCCGTGGCCCGCCGCGTGGGATTCCAACCCTaGCCTAACAATTCAGAAACT +
Preference number: 2 (lower is better)
Translates to: EVKDGARHVQGIIAVARRVGFQP*PNNSET
Trigger: AGTTTCTGAATTGTTAGGCCAGGGTTGGAATCCCAC...GCGGCGGGCCACGGCGATTATGCCCTGAACGTGACGGGCCCCATCCTTAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560028.1
3UTR-3UTR CCA 90 bp GCCAGGTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGACAGGGATGGCCAGGAGGAAGTGCTCCTaGGAAAGGGTCCCCGTGCTG +
Preference number: 2 (lower is better)
Translates to: ARLKASLMICARLMTGMARRKCS*ERVPVL
Trigger: CAGCACGGGGACCCTTTCCCAGGAGCACTTCCTCCT...GGCCATCCCTGTCATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR-3UTR GCA 90 bp CTCTCTGCAGCTGAGTCTGAATCTTCCTCCAGTTCTCTTCGTCGTAGTTCACCCGGGTCAAGGAGGAAGTaGTCCTGGGAAAGGGTCCCC +
Preference number: 2 (lower is better)
Translates to: LSAAESESSSSSLRRSSPGSRRK*SWERVP
Trigger: GGGGACCCTTTCCCAGGAGCACTTCCTCCTTGACCC...GGGTGAACTACGACGAAGAGAACTGGAGGAAGATTCAGACTCAGCTGCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCATCAGGAACTAGACTaGCTCACAGGCAGAGAGAAC +
Preference number: 2 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSHQELD*LTGREN
Trigger: GTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CCA 90 bp TTATGGGCACTGGCCAGGTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGACGGTGGTGGGGAGTTaGATGGACCGGTTGTTCACA +
Preference number: 2 (lower is better)
Translates to: LWALARLKASLMICARLMTVVGS*MDRLFT
Trigger: TGTGAACAACCGGTCCATCCAACTCCCCACCACCGT...CATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGCCAGTGCCCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR-3UTR TCA 90 bp ATTAATGATCTGTGCCCGATTGATGACAGGGATGGCCGAGTGGTCTCTCTGCAGCACGTAGTTGAATTCTaGGGGGCGGGTAACATTGGA +
Preference number: 2 (lower is better)
Translates to: INDLCPIDDRDGRVVSLQHVVEF*GAGNIG
Trigger: TCCAATGTTACCCGCCCCTCAGAATTCAACTACGTG...CTGCAGAGAGACCACTCGGCCATCCCTGTCATCAATCGGGCACAGATCATTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR-3UTR CCA 90 bp TCTGAATCTTCCTCCAGTTCTCTTCGTCGTAGTTCACCCGGTAATAGCCCGTCACTGAAGAGATCGTTCTaGGCTCTTACATCTATCAGC +
Preference number: 2 (lower is better)
Translates to: SESSSSSLRRSSPGNSPSLKRSF*ALTSIS
Trigger: GCTGATAGATGTAAGAGCCCAGAACGATCTCTTCAG...TGACGGGCTATTACCGGGTGAACTACGACGAAGAGAACTGGAGGAAGATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR CCA 72 bp TCAGGGCATAATCGCCGTGGCCCGCCGCAATGGCACTaGGCCGGGCCCAGATCCGGATCTGAAATCACTCAG +
Preference number: 3 (lower is better)
Translates to: SGHNRRGPPQWH*AGPRSGSEITQ
Trigger: CTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
3UTR-3UTR CAA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTACACATGTGGGCACCTaGCATGGGGGCCGGGTGACT +
Preference number: 3 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRATHVGT*HGGRVT
Trigger: AGTCACCCGGCCCCCATGCAAGGTGCCCACATGTGT...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR TCA 72 bp GCCGCAATGGCACTGGGCCGGGCCCAGATCCGGATCTaGAATCACTCAGAGGTGGGATTCCAACCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: AAMALGRAQIRI*NHSEVGFQPWP
Trigger: AGGCCAGGGTTGGAATCCCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
3UTR GCA 72 bp GTGCTGGTATCCACCGTGATGACCGGGAAGCCCATCTaGAGGGTCCAGCGGTTCATGATGTCCCGCACGGTG +
Preference number: 3 (lower is better)
Translates to: VLVSTVMTGKPI*RVQRFMMSRTV
Trigger: CACCGTGCGGGACATCATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGTCATCACGGTGGATACCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR-3UTR CAA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCCGTGGGCTGGAGACTTaGTCCTTGAGGGGAGGACAC +
Preference number: 3 (lower is better)
Translates to: TGRPPARPFIVHRELLLIRGLET*SLRGGH
Trigger: GTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACG...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR GCA 72 bp GGGCGGGTAACATTGGAATCGGGGTCAAGGAGGAAGTaGTCCTGGGAAAGGGTCCCCGTGCTGGTATCCACC +
Preference number: 3 (lower is better)
Translates to: GRVTLESGSRRK*SWERVPVLVST
Trigger: GGTGGATACCAGCACGGGGACCCTTTCCCAGGAGCACTTCCTCCTTGACCCCGATTCCAATGTTACCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560030.1
3UTR-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCGTGGGCTGGAGACTTaGTCCTTGAGGGGAGGACAC +
Preference number: 3 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSRGLET*SLRGGH
Trigger: GTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR-3UTR CAA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCGTGGGCTGGAGACTTaGTCCTTGAGGGGAGGACAC +
Preference number: 3 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCRGLET*SLRGGH
Trigger: GTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR GCA 72 bp GGCACTGGCCAGGTTGAAGGCGTCATTAATGATCTGTaGCCGATTGATGACAGGGATGGCCGAGTGGTCTCT +
Preference number: 3 (lower is better)
Translates to: GTGQVEGVINDL*PIDDRDGRVVS
Trigger: AGAGACCACTCGGCCATCCCTGTCATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGCCAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCGTGGCCCGCCGCAATaGCACTGGGCCGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPRGPPQ*HWAGPR
Trigger: TCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGAGGCGGACGGGGTGGTaGAGGCCACGGGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPRRTGW*RPRGSC
Trigger: ACAGCTCCCCCGTGGCCTCCACCACCCCGTCCGCCT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCAGGGCCCGGGTGCCTaGGCCGAAGCCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPQGPGA*AEACFL
Trigger: GAGGAAACAGGCTTCGGCTCAGGCACCCGGGCCCTG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCGAAGGTCACTGGACTaGGCAGGGGCACGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPRRSLD*AGARSA
Trigger: GGCGGAGCGTGCCCCTGCCCAGTCCAGTGACCTTCG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGAGCCCTTGGCCATGGTaGTGGTGGGGAGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPSPWPW*WWGGGS
Trigger: TGAGCCGCCTCCCCACCATCACCATGGCCAAGGGCT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGTGCATGGGGGCCGGGTaGCTTCAAGGGCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRCMGAG*LQGLGT
Trigger: AGTCCCCAGCCCTTGAAGTCACCCGGCCCCCATGCA...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGAGCTGGGCTTCCCTaGGATCAGCCCCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPGAGLP*DQPQGT
Trigger: AGTGCCCTGGGGCTGATCTCAGGGAAGCCCAGCTCC...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGCTCCAGGGCCCGGGTaGCTGAGCCGAAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRAPGPG*LSRSLF
Trigger: AAACAGGCTTCGGCTCAGGCACCCGGGCCCTGGAGC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCTCCAGGGCCCGGGTaGCTGAGCCGAAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPAPGPG*LSRSLF
Trigger: AAACAGGCTTCGGCTCAGGCACCCGGGCCCTGGAGC...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGGTGTGGACAGCGGGTaGGAGGAGGCCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRGVDSG*EEASAS
Trigger: GGATGCACTGGCCTCCTCCCACCCGCTGTCCACACC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCCATGGCGCCGGCGTTaGAGTCTGGCAGGCCAATCT +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRPWRRR*SLAGQS
Trigger: AGATTGGCCTGCCAGACTTCAACGCCGGCGCCATGG...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCCCGCCAGGTCATCTaGCAACTCCCCCTCGAACTC +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPARQVI*QLPLEL
Trigger: GAGTTCGAGGGGGAGTTGGCAGATGACCTGGCGGGC...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCCCACCCGCTCCTTGTTaGTGCTGGAGGAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRPPAPC*CWRRTG
Trigger: CCCTGTCCTCCTCCAGCAGCAACAAGGAGCGGGTGG...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTCCGCCGCAATGGCACTaGGCCGGGCCCAGATCCGGA +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPPPQWH*AGPRSG
Trigger: TCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGG...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TGGCACAGGGATGAAGAGAACGGGAAGACCCCTCAAGCCGGGGCCAGCCCACGTCCGCCGCAATGGCACTaGGCCGGGCCCAGATCCGGA +
Preference number: 4 (lower is better)
Translates to: WHRDEENGKTPQAGASPRPPQWH*AGPRSG
Trigger: TCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGG...ACGTGGGCTGGCCCCGGCTTGAGGGGTCTTCCCGTTCTCTTCATCCCTGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCTGTCCCGCACGGTGGTaGGGAGTTGGATGGACCGGT +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRCPARW*GVGWTG
Trigger: ACCGGTCCATCCAACTCCCCACCACCGTGCGGGACA...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCCCTGTCATTGGGGGTaGGGTACGGTCTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRPCHWG*GTVSAS
Trigger: TGACGCTGAGACCGTACCTCACCCCCAATGACAGGG...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCCCTGTCATTGGGGGTaGGGTACGGTCTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPPCHWG*GTVSAS
Trigger: TGACGCTGAGACCGTACCTCACCCCCAATGACAGGG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTCTGGGCCGGCGTGTTaGTCTCCGAGGCGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPSGPAC*SPRRVW
Trigger: CCACACCCGCCTCGGAGATCAACACGCCGGCCCAGA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGAGCATCCTGAGGACTaGGGCGCCCTTGCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPEHPED*GALAVG
Trigger: TCCTACAGCAAGGGCGCCTCAGTCCTCAGGATGCTC...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCGAGCATCCTGAGGACTaGGGCGCCCTTGCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSREHPED*GALAVG
Trigger: TCCTACAGCAAGGGCGCCTCAGTCCTCAGGATGCTC...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CCGCAATGGCACTGGGCCGGGCCCAGATCCGGATCTGAAATCACTCAGAGGTGGCGGGGCCAGCCCACGTaGAGGAGAGATGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PQWHWAGPRSGSEITQRWRGQPT*RRDGPS
Trigger: GCTGGGCCCATCTCTCCTTCACGTGGGCTGGCCCCG...CCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR GCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCAGGGAGCCCTTGAGGTaGACCACCAGGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRREPLR*TTRYSV
Trigger: CACCGAGTACCTGGTGGTGCACCTCAAGGGCTCCCT...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCCGGGCATCTGCAGCCTaGATCTGTGTAGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRRASAA*ICVVAT
Trigger: GGTGGCCACTACACAGATGCAGGCTGCAGATGCCCG...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCGGGTCAAGGAGGAAGTaGTCCTGGGAAAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRGSRRK*SWERVP
Trigger: GGGGACCCTTTCCCAGGAGCACTTCCTCCTTGACCC...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCTCCACAACTCTTTGCTaGAGGCCAGGGCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRSTTLC*RPGLPG
Trigger: TCCGGGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGA...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGTCCACAACTCTTTGCTaGAGGCCAGGGCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPSTTLC*RPGLPG
Trigger: TCCGGGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGA...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGGATCCACAACTCTTTaGTGCAGGCCAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRGSTTL*CRPGLP
Trigger: GGGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGATCC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGACCGGGCGCTGGAACCTaGACCCTGGACCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRPGAGT*TLDPGG
Trigger: CCCGCCAGGGTCCAGGGTCCAGGTTCCAGCGCCCGG...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300060.7
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCCGAGGCGGGGTTGGTaGTGGCTGAGGCGGACGGGG +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGPRRGW*WLRRTG
Trigger: CCCCGTCCGCCTCAGCCACCACCAACCCCGCCTCGG...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCCGAGGCGGGGTTGGTaGTGGCTGAGGCGGACGGGG +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAPRRGW*WLRRTG
Trigger: CCCCGTCCGCCTCAGCCACCACCAACCCCGCCTCGG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCCCGAGGCGGGGTTGGTaGTGGCTGAGGCGGACGGGG +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIPRRGW*WLRRTG
Trigger: CCCCGTCCGCCTCAGCCACCACCAACCCCGCCTCGG...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCACCGAGGCGGGGTTGGTaGTGGCTGAGGCGGACGGGG +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSPRRGW*WLRRTG
Trigger: CCCCGTCCGCCTCAGCCACCACCAACCCCGCCTCGG...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCCACCAGGTACTCGGTaGGCTCCACCAGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPPPGTR*APPAQS
Trigger: AGACTGAGCTGGTGGAGCCCACCGAGTACCTGGTGG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGTGTGGGCACCTTGCATaGGGGCCGGGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPCGHLA*GPGDFK
Trigger: CTTGAAGTCACCCGGCCCCCATGCAAGGTGCCCACA...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCACCAGCCGCTGGGATaGACACATGTGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRHQPLG*THVGTL
Trigger: CAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTG...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGATCTGGCCCTGGAGCTaGGCTTCCCTGAGATCAGCC +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPIWPWS*ASLRSA
Trigger: GGCTGATCTCAGGGAAGCCCAGCTCCAGGGCCAGAT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCTGCTCATCTGGCCCTaGAGCTGGGCTTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPLLIWP*SWASLR
Trigger: TCTCAGGGAAGCCCAGCTCCAGGGCCAGATGAGCAG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCTGCTCATCTGGCCCTaGAGCTGGGCTTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRLLIWP*SWASLR
Trigger: TCTCAGGGAAGCCCAGCTCCAGGGCCAGATGAGCAG...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGTGGTGGGCCAGCTCATaGGCAATCACAGTGACCACC +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRWWASS*AITVTT
Trigger: GGTGGTCACTGTGATTGCTCATGAGCTGGCCCACCA...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGTGGTGGGCCAGCTCATaGGCAATCACAGTGACCACC +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPWWASS*AITVTT
Trigger: GGTGGTCACTGTGATTGCTCATGAGCTGGCCCACCA...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTGGGTCCAGCGGTTCATaGTGTCCCGCACGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPGSSGS*CPARWW
Trigger: CCACCACCGTGCGGGACATCATGAACCGCTGGACCC...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCTGTTCAGCGCCAGAGTaGCAGGGACCTTATGGGCAC +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRCSAPE*QGPYGH
Trigger: GTGCCCATAAGGTCCCTGTCACTCTGGCGCTGAACA...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGTaGCTTCAAGGGCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPCMGAG*LQGLGT
Trigger: AGTCCCCAGCCCTTGAAGTCACCCGGCCCCCATGCA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGTGGAGACTTTGTCCTTaGGGGGAGGACACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPWRLCP*GEDTGA
Trigger: GGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCA...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTGGAGCTGGGCTTCCCTaGGATCAGCCCCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPGAGLP*DQPQGT
Trigger: AGTGCCCTGGGGCTGATCTCAGGGAAGCCCAGCTCC...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGGCCAGTGCATCCACTaGCATCACGCGGTACACATC +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRGQCIH*HHAVHI
Trigger: GATGTGTACCGCGTGATGGCAGTGGATGCACTGGCC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCGTGGCATTTCGGAACTaGTCCCAGGCGAAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRVAFRN*SQAKSH
Trigger: GTGGGACTTCGCCTGGGAGCAGTTCCGAAATGCCAC...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCGCCGCCGCCGTCCCTaGCCCTCCAGCACTGGACTC +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLRRRRP*PSSTGL
Trigger: GAGTCCAGTGCTGGAGGGGCAGGGACGGCGGCGGCG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS-3UTR GCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTCGGTCCCCATCCATaGCCCGGCATCTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEALGPHP*PGILAG
Trigger: CCCGGCCAAGATGCCGGGGCATGGATGGGGACCGAG...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCCGGGCGCTGGAACCTaGACCCTGGACCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLPGAGT*TLDPGG
Trigger: CCCGCCAGGGTCCAGGGTCCAGGTTCCAGCGCCCGG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300060.7
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAAGGCGGACGGGGTGGTaGAGGCCACGGGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSRRTGW*RPRGSC
Trigger: ACAGCTCCCCCGTGGCCTCCACCACCCCGTCCGCCT...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGGGTGCTGGGACCTTTaGGAAGCATGTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRGCWDL*EACWTG
Trigger: CCCTGTCCAACATGCTTCCCAAAGGTCCCAGCACCC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCGTGGCCCGCCGCAATaGCACTGGGCCGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSRGPPQ*HWAGPR
Trigger: TCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACGTGGCCCGCCGCAATaGCACTGGGCCGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRRGPPQ*HWAGPR
Trigger: TCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTGGTGTGGACAGCGGGTaGGAGGAGGCCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPGVDSG*EEASAS
Trigger: GGATGCACTGGCCTCCTCCCACCCGCTGTCCACACC...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAAGGCTGCAGGCGGCCTaGGATCAGGCCCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSRLQAA*DQARGL
Trigger: CAGCCCTCGGGCCTGATCCCAGGCCGCCTGCAGCCT...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCATGAGCAATCACAGTaGCCACCCGCTCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPHEQSQ*PPAPCC
Trigger: GCAACAAGGAGCGGGTGGTCACTGTGATTGCTCATG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp ATCTGCAGGGTCCAGCGGTTCATGATGTCCCGCACGGTGGTGGGGAGTTGGATGTCTGGGCCGGCGTGTTaGTCTCCGAGGCGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ICRVQRFMMSRTVVGSWMSGPAC*SPRRVW
Trigger: CCACACCCGCCTCGGAGATCAACACGCCGGCCCAGA...CATCCAACTCCCCACCACCGTGCGGGACATCATGAACCGCTGGACCCTGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGTGTCACTGCCTGGATaGGGTTGGAGAAGGAGAACG +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPVSLPG*GWRRRT
Trigger: CGTTCTCCTTCTCCAACCTCATCCAGGCAGTGACAC...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGTGTCACTGCCTGGATaGGGTTGGAGAAGGAGAACG +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRVSLPG*GWRRRT
Trigger: CGTTCTCCTTCTCCAACCTCATCCAGGCAGTGACAC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGACAGGGCCCGGGTGCCTaGGCCGAAGCCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRQGPGA*AEACFL
Trigger: GAGGAAACAGGCTTCGGCTCAGGCACCCGGGCCCTG...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCAGGGCCCGGGTGCCTaGGCCGAAGCCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGQGPGA*AEACFL
Trigger: GAGGAAACAGGCTTCGGCTCAGGCACCCGGGCCCTG...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCTGCATGGGGGCCGGGTaGCTTCAAGGGCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEACMGAG*LQGLGT
Trigger: AGTCCCCAGCCCTTGAAGTCACCCGGCCCCCATGCA...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCATCAGGCCCGAGGGCTaGAGGGCAGGCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIIRPEG*RAGFRL
Trigger: CAGCCGGAAGCCTGCCCTTCAGCCCTCGGGCCTGAT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS-3UTR GCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCTTCTGGAAGTGGGGTaGTGGGACCTTTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPLLEVG*WDLWEA
Trigger: TGCTTCCCAAAGGTCCCAGCACCCCACTTCCAGAAG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTCCCGCTCCTTGTTGCTaGTGGAGGAGGACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPPAPCC*WRRTGG
Trigger: ACCCCCTGTCCTCCTCCAGCAGCAACAAGGAGCGGG...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp TGGCACAGGGATGAAGAGAACGGGAAGACCCCTCAAGCCGGGGCCAGCCCACGTCCCGCTCCTTGTTGCTaGTGGAGGAGGACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: WHRDEENGKTPQAGASPRPAPCC*WRRTGG
Trigger: ACCCCCTGTCCTCCTCCAGCAGCAACAAGGAGCGGG...ACGTGGGCTGGCCCCGGCTTGAGGGGTCTTCCCGTTCTCTTCATCCCTGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR GCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGAACTGCTCCAGCTGCTaGAGCTCATACTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRNCSSC*SSYSVE
Trigger: CTCCACCGAGTATGAGCTGCAGCAGCTGGAGCAGTT...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCGGGGCACGCTCCGCCTaGGGAGAGGAGATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAGARSA*GEEIQE
Trigger: TTCCTGGATCTCCTCTCCCCAGGCGGAGCGTGCCCC...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCGAAGGTCACTGGACTaGGCAGGGGCACGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGRRSLD*AGARSA
Trigger: GGCGGAGCGTGCCCCTGCCCAGTCCAGTGACCTTCG...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCGAAGGTCACTGGACTaGGCAGGGGCACGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRARRSLD*AGARSA
Trigger: GGCGGAGCGTGCCCCTGCCCAGTCCAGTGACCTTCG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAAGGCGGACGGGGTGGTaGAGGCCACGGGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRRRTGW*RPRGSC
Trigger: ACAGCTCCCCCGTGGCCTCCACCACCCCGTCCGCCT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCAGGCGGACGGGGTGGTaGAGGCCACGGGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLRRTGW*RPRGSC
Trigger: ACAGCTCCCCCGTGGCCTCCACCACCCCGTCCGCCT...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTTTGGTCCAAGGTGGTaGCCGAGGCGGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPFGPRW*PRRGWW
Trigger: CCACCAACCCCGCCTCGGCCACCACCTTGGACCAAA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCCTGGAAGTGGGGTGCTaGGACCTTTGGGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRLEVGC*DLWEAC
Trigger: ACATGCTTCCCAAAGGTCCCAGCACCCCACTTCCAG...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCCGCCGCAATGGCACTaGGCCGGGCCCAGATCCGGA +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLPPQWH*AGPRSG
Trigger: TCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCCGCCGCAATGGCACTaGGCCGGGCCCAGATCCGGA +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSPPQWH*AGPRSG
Trigger: TCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AATGGCACTGGGCCGGGCCCAGATCCGGATCTGAAATCACTCAGAGGTGGGATTCGTGGCCCGCCGCAATaGCACTGGGCCGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NGTGPGPDPDLKSLRGGIRGPPQ*HWAGPR
Trigger: TCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACG...AATCCCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CCA 90 bp GTGGGGAGTTGGATGGACCGGTTGTTCACAGCCTCCTGCAGGTGGTCCCACAGGGGTGTGGACAGCGGGTaGGAGGAGGCCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: VGSWMDRLFTASCRWSHRGVDSG*EEASAS
Trigger: GGATGCACTGGCCTCCTCCCACCCGCTGTCCACACC...CCTGTGGGACCACCTGCAGGAGGCTGTGAACAACCGGTCCATCCAACTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGAACAGCTCACTGATCTaGGCCGGCGTGTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRNSSLI*AGVLIS
Trigger: GGAGATCAACACGCCGGCCCAGATCAGTGAGCTGTT...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGTGGTGGGGAGTTGGATaGACCGGTTGTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPWWGVG*TGCSQP
Trigger: AGGCTGTGAACAACCGGTCCATCCAACTCCCCACCA...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGACGGTGGTGGGGAGTTaGATGGACCGGTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRTVVGS*MDRLFT
Trigger: TGTGAACAACCGGTCCATCCAACTCCCCACCACCGT...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCACGGTGGTGGGGAGTTaGATGGACCGGTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRTVVGS*MDRLFT
Trigger: TGTGAACAACCGGTCCATCCAACTCCCCACCACCGT...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGTCCCGCACGGTGGTaGGGAGTTGGATGGACCGGT +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPCPARW*GVGWTG
Trigger: ACCGGTCCATCCAACTCCCCACCACCGTGCGGGACA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCGTGACAGGGACCTTATaGGCACTGGCCAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRVTGTL*ALARLK
Trigger: CTTCAACCTGGCCAGTGCCCATAAGGTCCCTGTCAC...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGTGACAGGGACCTTATaGGCACTGGCCAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPVTGTL*ALARLK
Trigger: CTTCAACCTGGCCAGTGCCCATAAGGTCCCTGTCAC...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGTGACAGGGACCTTATaGGCACTGGCCAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRVTGTL*ALARLK
Trigger: CTTCAACCTGGCCAGTGCCCATAAGGTCCCTGTCAC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCATCTCCTCACACTCTaGAACTCCGTTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRHLLTL*NSVGAG
Trigger: GCCTGCTCCAACGGAGTTCCAGAGTGTGAGGAGATG...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCGTCGTGTCACTGCCTaGATGAGGTTGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRRRVTA*MRLEKE
Trigger: CTCCTTCTCCAACCTCATCCAGGCAGTGACACGACG...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAAGCCCTTGGCCATGGTaGTGGTGGGGAGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRSPWPW*WWGGGS
Trigger: TGAGCCGCCTCCCCACCATCACCATGGCCAAGGGCT...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCTGGGAGTACACCACTaGCAGTGCGATGATTGTGCA +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPLGVHH*QCDDCA
Trigger: TGCACAATCATCGCACTGTCAGTGGTGTACTCCCAG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCCATGGCGCCGGCGTTaGAGTCTGGCAGGCCAATCT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAPWRRR*SLAGQS
Trigger: AGATTGGCCTGCCAGACTTCAACGCCGGCGCCATGG...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCTCTGGGCCGGCGTGTTaGTCTCCGAGGCGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLSGPAC*SPRRVW
Trigger: CCACACCCGCCTCGGAGATCAACACGCCGGCCCAGA...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGTCTGGGCCGGCGTGTTaGTCTCCGAGGCGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGSGPAC*SPRRVW
Trigger: CCACACCCGCCTCGGAGATCAACACGCCGGCCCAGA...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGGGTCCAGCGGTTCATaGTGTCCCGCACGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRGSSGS*CPARWW
Trigger: CCACCACCGTGCGGGACATCATGAACCGCTGGACCC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTGGGTCCAGCGGTTCATaGTGTCCCGCACGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAGSSGS*CPARWW
Trigger: CCACCACCGTGCGGGACATCATGAACCGCTGGACCC...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAGGGTCCAGCGGTTCATaGTGTCCCGCACGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSGSSGS*CPARWW
Trigger: CCACCACCGTGCGGGACATCATGAACCGCTGGACCC...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCATTGCCTGATGTGCTaGAGAGATCGTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRHCLMC*RDRSGL
Trigger: GAGCCCAGAACGATCTCTTCAGCACATCAGGCAATG...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCATTGCCTGATGTGCTaGAGAGATCGTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPHCLMC*RDRSGL
Trigger: GAGCCCAGAACGATCTCTTCAGCACATCAGGCAATG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGAATAGCCCGTCACATTaGGGTTCAGCAGGACCCACT +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPNSPSH*GSAGPT
Trigger: AGTGGGTCCTGCTGAACCTCAATGTGACGGGCTATT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCTTGTCAGCCTCATTaGCCAGTGTGGCATTTCGGA +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPACQPH*PVWHFG
Trigger: TCCGAAATGCCACACTGGTCAATGAGGCTGACAAGC...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATGCATGGGGGCCGGGTaGCTTCAAGGGCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSCMGAG*LQGLGT
Trigger: AGTCCCCAGCCCTTGAAGTCACCCGGCCCCCATGCA...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGGAGCTGGGCTTCCCTaGGATCAGCCCCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRGAGLP*DQPQGT
Trigger: AGTGCCCTGGGGCTGATCTCAGGGAAGCCCAGCTCC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCGGAGGATCCCCAGGATaGCCAGGGACTTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRGGSPG*PGTWKY
Trigger: ATATTTCCAAGTCCCTGGGCATCCTGGGGATCCTCC...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTCGGGCATCTGCAGCCTaGATCTGTGTAGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPRASAA*ICVVAT
Trigger: GGTGGCCACTACACAGATGCAGGCTGCAGATGCCCG...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CACCGTGATGACCGGGAAGCCCATCTGCAGGGTCCAGCGGTTCATGATGTCCCGGTGGGAGGAGGCCAGTaGATCCACTGCCATCACGCG +
Preference number: 4 (lower is better)
Translates to: HRDDREAHLQGPAVHDVPVGGGQ*IHCHHA
Trigger: CGCGTGATGGCAGTGGATGCACTGGCCTCCTCCCAC...CGGGACATCATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGTCATCACGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR GCA 90 bp ACCGGGAAGCCCATCTGCAGGGTCCAGCGGTTCATGATGTCCCGCACGGTGGTGGGGTCAAGGAGGAAGTaGTCCTGGGAAAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TGKPICRVQRFMMSRTVVGSRRK*SWERVP
Trigger: GGGGACCCTTTCCCAGGAGCACTTCCTCCTTGACCC...CACCACCGTGCGGGACATCATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR GCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTGGATCCACAACTCTTTaGTGCAGGCCAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPGSTTL*CRPGLP
Trigger: GGGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGATCC...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCCAGGGCCCGGGTaGCTGAGCCGAAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRAPGPG*LSRSLF
Trigger: AAACAGGCTTCGGCTCAGGCACCCGGGCCCTGGAGC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCAGGGGCTGGGAGGTaGTCAGGCAGCCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRAGAGR*SGSLGH
Trigger: ATGACCCAGGCTGCCTGAGCACCTCCCAGCCCCTGC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCACTGGAACCTGGACCCTaGACCCTGGCGGGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSLEPGP*TLAGSE
Trigger: CTCGGAACCCGCCAGGGTCCAGGGTCCAGGTTCCAG...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300060.7
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGGGGCACGCTCCGCCTaGGGAGAGGAGATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRGARSA*GEEIQE
Trigger: TTCCTGGATCTCCTCTCCCCAGGCGGAGCGTGCCCC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCTTCCACGCTTTACTTTaGTCCAAGGTGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRFHALL*SKVVAE
Trigger: CTCGGCCACCACCTTGGACCAAAGTAAAGCGTGGAA...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGTTCCACGCTTTACTTTaGTCCAAGGTGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPFHALL*SKVVAE
Trigger: CTCGGCCACCACCTTGGACCAAAGTAAAGCGTGGAA...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCTGTCCATCTCATACTaGCTGTCCTTCACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPLSISY*LSFTRE
Trigger: CTCCCTGGTGAAGGACAGCCAGTATGAGATGGACAG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCTTTGGGAAGCATGTTaGACAGGGCTGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPLWEAC*TGLSGP
Trigger: AGGACCTGACAGCCCTGTCCAACATGCTTCCCAAAG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TCAGGGCATAATCGCCGTGGCCCGCCGCAATGGCACTGGGCCGGGCCCAGATCCCTTTGGGAAGCATGTTaGACAGGGCTGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SGHNRRGPPQWHWAGPRSLWEAC*TGLSGP
Trigger: AGGACCTGACAGCCCTGTCCAACATGCTTCCCAAAG...GGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGAGTACGTGGACATCTTaGGCGTGGTGTGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRSTWTS*AWCGTQ
Trigger: CTGAGTTCCACACCACGCCCAAGATGTCCACGTACT...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCGCCGCAATGGCACTaGGCCGGGCCCAGATCCGGA +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCPPQWH*AGPRSG
Trigger: TCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCTTTCAAGTTCCAGGTaGGCTCCGCATAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPLSSSR*APHSQH
Trigger: GTGCTGACTATGCGGAGCCCACCTGGAACTTGAAAG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCTGTCCCGCACGGTGGTaGGGAGTTGGATGGACCGGT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEACPARW*GVGWTG
Trigger: ACCGGTCCATCCAACTCCCCACCACCGTGCGGGACA...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGGGATGGACACATGTaGGCACCTTGCATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPWDGHM*APCMGA
Trigger: GGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAAGCCCTTGGCCATGGTaGTGGTGGGGAGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRSPWPW*WWGGGS
Trigger: TGAGCCGCCTCCCCACCATCACCATGGCCAAGGGCT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGATGGCCTCCTTGCAGGTaGAACGGACGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRWPPCR*NGRCWS
Trigger: GCTCCAGCACCGTCCGTTTCACCTGCAAGGAGGCCA...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTGGCCTCCTTGCAGGTaGAACGGACGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAWPPCR*NGRCWS
Trigger: GCTCCAGCACCGTCCGTTTCACCTGCAAGGAGGCCA...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGTGGTGTGGAACTCAGTaGCATTCCAGTTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRWCGTQ*HSSWGL
Trigger: AAGACCCCAACTGGAATGTCACTGAGTTCCACACCA...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCCATGGCGCCGGCGTTaGAGTCTGGCAGGCCAATCT +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAPWRRR*SLAGQS
Trigger: AGATTGGCCTGCCAGACTTCAACGCCGGCGCCATGG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GCCGGGCCCAGATCCGGATCTGAAATCACTCAGAGGTGGGATTCCAACCCTGGCCCATGGCGCCGGCGTTaGAGTCTGGCAGGCCAATCT +
Preference number: 4 (lower is better)
Translates to: AGPRSGSEITQRWDSNPGPWRRR*SLAGQS
Trigger: AGATTGGCCTGCCAGACTTCAACGCCGGCGCCATGG...GCCAGGGTTGGAATCCCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR TCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCGAGCATCCTGAGGACTaGGGCGCCCTTGCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAEHPED*GALAVG
Trigger: TCCTACAGCAAGGGCGCCTCAGTCCTCAGGATGCTC...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAAGCTGGAGAGCATCCTaGGGACTGAGGCGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSSWRAS*GLRRPC
Trigger: GCAAGGGCGCCTCAGTCCTCAGGATGCTCTCCAGCT...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAAGCTGGAGAGCATCCTaGGGACTGAGGCGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRSWRAS*GLRRPC
Trigger: GCAAGGGCGCCTCAGTCCTCAGGATGCTCTCCAGCT...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GTGGGGAGTTGGATGGACCGGTTGTTCACAGCCTCCTGCAGGTGGTCCCACAGGACGCCAGGCCCTGCTTaGATACGTCCTCGGACAGGA +
Preference number: 4 (lower is better)
Translates to: VGSWMDRLFTASCRWSHRTPGPA*IRPRTG
Trigger: TCCTGTCCGAGGACGTATTCAAGCAGGGCCTGGCGT...CCTGTGGGACCACCTGCAGGAGGCTGTGAACAACCGGTCCATCCAACTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR TCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCCACGTAGTTGAATTCTaGGGGGCGGGTAACATTGGA +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRHVVEF*GAGNIG
Trigger: TCCAATGTTACCCGCCCCTCAGAATTCAACTACGTG...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCACGTAGTTGAATTCTaGGGGGCGGGTAACATTGGA +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPHVVEF*GAGNIG
Trigger: TCCAATGTTACCCGCCCCTCAGAATTCAACTACGTG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCGACCCACTCATTGCCTaGTGTGCTGAAGAGATCGTT +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRDPLIA*CAEEIV
Trigger: AACGATCTCTTCAGCACATCAGGCAATGAGTGGGTC...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGGAGACTTTGTCCTTaGGGGGAGGACACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPWRLCP*GEDTGA
Trigger: GGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCAGGGAGCCCTTGAGGTaGACCACCAGGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAREPLR*TTRYSV
Trigger: CACCGAGTACCTGGTGGTGCACCTCAAGGGCTCCCT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAGCCCGCCAGGTCATCTaGCAACTCCCCCTCGAACTC +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSARQVI*QLPLEL
Trigger: GAGTTCGAGGGGGAGTTGGCAGATGACCTGGCGGGC...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCGCCCGCCAGGTCATCTaGCAACTCCCCCTCGAACTC +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIARQVI*QLPLEL
Trigger: GAGTTCGAGGGGGAGTTGGCAGATGACCTGGCGGGC...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCCTCCATGTACTCGCTaGGGTAGAAGCCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAPPCTR*GRSPPG
Trigger: ACCTGGCGGGCTTCTACCGCAGCGAGTACATGGAGG...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCCCCGCTCCTTGTTGCTaGTGGAGGAGGACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIPAPCC*WRRTGG
Trigger: ACCCCCTGTCCTCCTCCAGCAGCAACAAGGAGCGGG...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCCACCCGCTCCTTGTTaGTGCTGGAGGAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAPPAPC*CWRRTG
Trigger: CCCTGTCCTCCTCCAGCAGCAACAAGGAGCGGGTGG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTGTGGGAGGAGGCCAGTaGATCCACTGCCATCACGCG +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAVGGGQ*IHCHHA
Trigger: CGCGTGATGGCAGTGGATGCACTGGCCTCCTCCCAC...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCGGGTCAAGGAGGAAGTaGTCCTGGGAAAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAGSRRK*SWERVP
Trigger: GGGGACCCTTTCCCAGGAGCACTTCCTCCTTGACCC...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGTTGTCCTTCTTGAACTaGTCCAGCTGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRLSFLN*SSCCSS
Trigger: TGAGCTGCAGCAGCTGGAGCAGTTCAAGAAGGACAA...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCTTGTCCTTCTTGAACTaGTCCAGCTGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRLSFLN*SSCCSS
Trigger: TGAGCTGCAGCAGCTGGAGCAGTTCAAGAAGGACAA...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGGCTCCAGGGCCCGGGTaGCTGAGCCGAAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGAPGPG*LSRSLF
Trigger: AAACAGGCTTCGGCTCAGGCACCCGGGCCCTGGAGC...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCTGGAACCTGGACCCTaGACCCTGGCGGGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLLEPGP*TLAGSE
Trigger: CTCGGAACCCGCCAGGGTCCAGGGTCCAGGTTCCAG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300060.7
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCCACAACAGGCAGACTaGGCAAAAATTAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPPQQAD*AKINQG
Trigger: GCCCTGGTTAATTTTTGCCCAGTCTGCCTGTTGTGG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCGGATGCCCAGGGACTTaGAAATATAGAAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRGCPGT*KYRSPW
Trigger: CCAAGGGCTTCTATATTTCCAAGTCCCTGGGCATCC...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGGATGCCCAGGGACTTaGAAATATAGAAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRGCPGT*KYRSPW
Trigger: CCAAGGGCTTCTATATTTCCAAGTCCCTGGGCATCC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGATTTGGTCCAAGGTGGTaGCCGAGGCGGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRFGPRW*PRRGWW
Trigger: CCACCAACCCCGCCTCGGCCACCACCTTGGACCAAA...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTCGGGTTTCAGCGTGTTaGGGAGGCGGTAACGATTCC +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPRVSAC*GGGNDS
Trigger: GGAATCGTTACCGCCTCCCCAACACGCTGAAACCCG...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGTCAGGTCCTTGGGGTaGATAAGCGTGATGTTGAAC +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRVRSLG*ISVMLN
Trigger: GTTCAACATCACGCTTATCCACCCCAAGGACCTGAC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCTGGAGGAGGACAGGGGGTCGAACAGCAGGGAGTTCTCCCGGTAGGTCACCAGGGGTGCTGGGACCTTTaGGAAGCATGTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: AGGGQGVEQQGVLPVGHQGCWDL*EACWTG
Trigger: CCCTGTCCAACATGCTTCCCAAAGGTCCCAGCACCC...CTGGTGACCTACCGGGAGAACTCCCTGCTGTTCGACCCCCTGTCCTCCTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCGGATCAAGACACCATTaGATGCCTGCTTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRGSRHH*MPASPR
Trigger: ACGTGGAGAAGCAGGCATCCAATGGTGTCTTGATCC...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGGGTGTGGACAGCGGGTaGGAGGAGGCCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGGVDSG*EEASAS
Trigger: GGATGCACTGGCCTCCTCCCACCCGCTGTCCACACC...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CACCGTGATGACCGGGAAGCCCATCTGCAGGGTCCAGCGGTTCATGATGTCCCGAGGAGGAAGTGCTCCTaGGAAAGGGTCCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: HRDDREAHLQGPAVHDVPRRKCS*ERVPVL
Trigger: CAGCACGGGGACCCTTTCCCAGGAGCACTTCCTCCT...CGGGACATCATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGTCATCACGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCACCCTGCACCAGCCGCTaGGATGGACACATGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSPCTSR*DGHMWA
Trigger: TGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGG...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCTTGAGGGGAGGACACTaGTGCCTCGGGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEALRGGH*CLGLQE
Trigger: TTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAA...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCATCAGGAACTAGACTaGCTCACAGGCAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPHQELD*LTGREN
Trigger: GTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGGTGCCAGGGAGGGCGTaGAATAGGCTCCACAACCCC +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGVPGRA*NRLHNP
Trigger: GGGGTTGTGGAGCCTATTCCACGCCCTCCCTGGCAC...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679248.1
3UTR CAA 72 bp CTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTaGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LAHRQRERGLET*SLRGGHWCLGL
Trigger: GAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR CAA 72 bp CCAGCGGTTCATGATGTCCCGCACGGTGGTGGGGAGTaGGATGGACCGGTTGTTCACAGCCTCCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PAVHDVPHGGGE*DGPVVHSLLQV
Trigger: CACCTGCAGGAGGCTGTGAACAACCGGTCCATCCAACTCCCCACCACCGTGCGGGACATCATGAACCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR TCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAAGCCCTTGGCCATGGTaGTGGTGGGGAGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGSPWPW*WWGGGS
Trigger: TGAGCCGCCTCCCCACCATCACCATGGCCAAGGGCT...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCCACTGACAGTGCGATaGTTGTGCACACGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAPLTVR*LCTRLP
Trigger: TGGCAGCCGTGTGCACAATCATCGCACTGTCAGTGG...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGATGGCCTCCTTGCAGGTaGAACGGACGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRWPPCR*NGRCWS
Trigger: GCTCCAGCACCGTCCGTTTCACCTGCAAGGAGGCCA...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGGATGAAGAGAACGGGAAGACCCCTCAAGCCGGGGCCAGCCCACGTGAAGGAGCAGGCCAATCTGGTCTaGTTTTGGGAGTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GMKRTGRPLKPGPAHVKEQANLV*FWEWVG
Trigger: CCCTACCCACTCCCAAAATCAGACCAGATTGGCCTG...CTCCTTCACGTGGGCTGGCCCCGGCTTGAGGGGTCTTCCCGTTCTCTTCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR TCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACCATGGCGCCGGCGTTaGAGTCTGGCAGGCCAATCT +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRPWRRR*SLAGQS
Trigger: AGATTGGCCTGCCAGACTTCAACGCCGGCGCCATGG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTCATGAGCAATCACAGTaGCCACCCGCTCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPHEQSQ*PPAPCC
Trigger: GCAACAAGGAGCGGGTGGTCACTGTGATTGCTCATG...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCATCATTCAGCACCATaGGGTCTTTCAAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPHHSAP*GLSSSR
Trigger: CCTGGAACTTGAAAGACCTCATGGTGCTGAATGATG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGCTGGAGAGCATCCTaGGGACTGAGGCGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSSWRAS*GLRRPC
Trigger: GCAAGGGCGCCTCAGTCCTCAGGATGCTCTCCAGCT...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGAGCTGGAGAGCATCCTaGGGACTGAGGCGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGSWRAS*GLRRPC
Trigger: GCAAGGGCGCCTCAGTCCTCAGGATGCTCTCCAGCT...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTACGCCAGGCCCTGCTTaGATACGTCCTCGGACAGGA +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRATPGPA*IRPRTG
Trigger: TCCTGTCCGAGGACGTATTCAAGCAGGGCCTGGCGT...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAACGCCAGGCCCTGCTTaGATACGTCCTCGGACAGGA +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSTPGPA*IRPRTG
Trigger: TCCTGTCCGAGGACGTATTCAAGCAGGGCCTGGCGT...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGATTTGCTGTTTTCTGTaGACCACTGGAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPICCFL*TTGAPP
Trigger: AGGTGGTGCTCCAGTGGTTCACAGAAAACAGCAAAT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGAGCTGGGCTTCCCTaGGATCAGCCCCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGGAGLP*DQPQGT
Trigger: AGTGCCCTGGGGCTGATCTCAGGGAAGCCCAGCTCC...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCCCCTTCCTCTTCACTaGGAGCTGCGGCGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLPLPLH*ELRRRL
Trigger: AAGCCTCCGCCGCAGCTCTCAGTGAAGAGGAAGGGG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679248.1
CDS-3UTR GCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAAGGGAGCCCTTGAGGTaGACCACCAGGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSREPLR*TTRYSV
Trigger: CACCGAGTACCTGGTGGTGCACCTCAAGGGCTCCCT...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGACGGGCATCTGCAGCCTaGATCTGTGTAGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRRASAA*ICVVAT
Trigger: GGTGGCCACTACACAGATGCAGGCTGCAGATGCCCG...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGAGGAGGACAGGGGGTCGAACAGCAGGGAGTTCTCCCGGTAGGTCACCAGTCCCTTCTGGAAGTGGGGTaGTGGGACCTTTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GGGQGVEQQGVLPVGHQSLLEVG*WDLWEA
Trigger: TGCTTCCCAAAGGTCCCAGCACCCCACTTCCAGAAG...GGACTGGTGACCTACCGGGAGAACTCCCTGCTGTTCGACCCCCTGTCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR GCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACCACCCGCTCCTTGTTaGTGCTGGAGGAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRPPAPC*CWRRTG
Trigger: CCCTGTCCTCCTCCAGCAGCAACAAGGAGCGGGTGG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGTGGGAGGAGGCCAGTaGATCCACTGCCATCACGCG +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLVGGGQ*IHCHHA
Trigger: CGCGTGATGGCAGTGGATGCACTGGCCTCCTCCCAC...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCGGACTGAGGCGCCCTTaGTGTAGGAGATGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAGLRRP*CRRWRQ
Trigger: TTGACGCCATCTCCTACAGCAAGGGCGCCTCAGTCC...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTACCGGGAAGCCCATCTaGAGGGTCCAGCGGTTCATG +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRATGKPI*RVQRFM
Trigger: CATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGT...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTCCACAACTCTTTGCTaGAGGCCAGGGCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLISTTLC*RPGLPG
Trigger: TCCGGGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGA...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTAACTGCTCCAGCTGCTaGAGCTCATACTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPNCSSC*SSYSVE
Trigger: CTCCACCGAGTATGAGCTGCAGCAGCTGGAGCAGTT...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTGCAGGGGCTGGGAGGTaGTCAGGCAGCCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETAGAGR*SGSLGH
Trigger: ATGACCCAGGCTGCCTGAGCACCTCCCAGCCCCTGC...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTGCAGGGGCTGGGAGGTaGTCAGGCAGCCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCAGAGR*SGSLGH
Trigger: ATGACCCAGGCTGCCTGAGCACCTCCCAGCCCCTGC...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTCCATCGAGAGCTTCTaGTCATCTGGCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPSIESF*SSGPGA
Trigger: AGCTCCAGGGCCAGATGAGCAGAAGCTCTCGATGGA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATGTCTGGTTACAGGCTaGAGGCGGCCTGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSCLVTG*RRPGIR
Trigger: CCTGATCCCAGGCCGCCTGCAGCCTGTAACCAGACA...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS-3UTR GCA 90 bp TCTTCAATCAGGAAGAGGGTGTTGTTCAGCGCCAGAGTGACAGGGACCTTATGGCGCCCTCCTTCCCCGTaGCCCACGAGGAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSIRKRVLFSARVTGTLWRPPSP*PTRSGL
Trigger: CAGCCCGCTCCTCGTGGGGCACGGGGAAGGAGGGCG...CCATAAGGTCCCTGTCACTCTGGCGCTGAACAACACCCTCTTCCTGATTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGACTGGAACCTGGACCCTaGACCCTGGCGGGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGLEPGP*TLAGSE
Trigger: CTCGGAACCCGCCAGGGTCCAGGGTCCAGGTTCCAG...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300060.7
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTGGGGCACGCTCCGCCTaGGGAGAGGAGATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCGARSA*GEEIQE
Trigger: TTCCTGGATCTCCTCTCCCCAGGCGGAGCGTGCCCC...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTCCACGGGGGAGCTGTTaGCGTTCTTGTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPPRGSC*RSCSSP
Trigger: AGGAGAAGAACAAGAACGCCAACAGCTCCCCCGTGG...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGTTTGGTCCAAGGTGGTaGCCGAGGCGGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSFGPRW*PRRGWW
Trigger: CCACCAACCCCGCCTCGGCCACCACCTTGGACCAAA...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGTTTGGTCCAAGGTGGTaGCCGAGGCGGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGFGPRW*PRRGWW
Trigger: CCACCAACCCCGCCTCGGCCACCACCTTGGACCAAA...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCCACCAGGTACTCGGTaGGCTCCACCAGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAPPGTR*APPAQS
Trigger: AGACTGAGCTGGTGGAGCCCACCGAGTACCTGGTGG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCACCACCAGGTACTCGGTaGGCTCCACCAGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSPPGTR*APPAQS
Trigger: AGACTGAGCTGGTGGAGCCCACCGAGTACCTGGTGG...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TGGCACAGGGATGAAGAGAACGGGAAGACCCCTCAAGCCGGGGCCAGCCCACGTAGGCCAGCAAGTACGTaGACATCTTGGGCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: WHRDEENGKTPQAGASPRRPAST*TSWAWC
Trigger: ACACCACGCCCAAGATGTCCACGTACTTGCTGGCCT...ACGTGGGCTGGCCCCGGCTTGAGGGGTCTTCCCGTTCTCTTCATCCCTGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGTGTGGACAGCGGGTaGGAGGAGGCCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGGVDSG*EEASAS
Trigger: GGATGCACTGGCCTCCTCCCACCCGCTGTCCACACC...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGACAGGTTCAGGTAGATaGTGTTCTGGTAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPTGSGR*CSGRQR
Trigger: CCTTTGCCTACCAGAACACCATCTACCTGAACCTGT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCACAGGTTCAGGTAGATaGTGTTCTGGTAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRTGSGR*CSGRQR
Trigger: CCTTTGCCTACCAGAACACCATCTACCTGAACCTGT...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGGTGGGGAGTTGGATaGACCGGTTGTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPWWGVG*TGCSQP
Trigger: AGGCTGTGAACAACCGGTCCATCCAACTCCCCACCA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTACGGTGGTGGGGAGTTaGATGGACCGGTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPTVVGS*MDRLFT
Trigger: TGTGAACAACCGGTCCATCCAACTCCCCACCACCGT...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCTGTCCCGCACGGTGGTaGGGAGTTGGATGGACCGGT +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLCPARW*GVGWTG
Trigger: ACCGGTCCATCCAACTCCCCACCACCGTGCGGGACA...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGTCCATCAGGTTTTCTaGGATCTCCCTCCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPVHQVF*DLPPVV
Trigger: AACAACTGGAGGGAGATCCCAGAAAACCTGATGGAC...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGTTAACCTCGCTGTACTaGTCCATCAGGTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRLTSLY*SIRFSG
Trigger: CCCAGAAAACCTGATGGACCAGTACAGCGAGGTTAA...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCGTTGCAGTAGACGGTaGACCGCAGGTTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRARCSRR*TAGWGG
Trigger: TCCACCCCAACCTGCGGTCCACCGTCTACTGCAACG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGTTCTTCCAGTTGCTCTaGACAAAGTCCCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPFFQLL*TKSQTR
Trigger: TCTGGTCTGGGACTTTGTCCAGAGCAACTGGAAGAA...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATGGGATGGACACATGTaGGCACCTTGCATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSWDGHM*APCMGA
Trigger: GGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCA...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCACCAGCCGCTGGGATaGACACATGTGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAHQPLG*THVGTL
Trigger: CAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACCCTGCACCAGCCGCTaGGATGGACACATGTGGGCA +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRPCTSR*DGHMWA
Trigger: TGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAATCTGGCCCTGGAGCTaGGCTTCCCTGAGATCAGCC +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSIWPWS*ASLRSA
Trigger: GGCTGATCTCAGGGAAGCCCAGCTCCAGGGCCAGAT...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTGCTCATCTGGCCCTaGAGCTGGGCTTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGLLIWP*SWASLR
Trigger: TCTCAGGGAAGCCCAGCTCCAGGGCCAGATGAGCAG...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR CAA 72 bp CACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTaGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HRQRERGLETLS*RGGHWCLGLQE
Trigger: TTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
3UTR CAA 72 bp AAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATaGTCCATCGAGAGCTTCTGCTCATCTGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: KRVQGGPQQGRS*SIESFCSSGPG
Trigger: TCCAGGGCCAGATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACCCTGTCATTGGGGGTaGGGTACGGTCTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRPCHWG*GTVSAS
Trigger: TGACGCTGAGACCGTACCTCACCCCCAATGACAGGG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTGGCCTCCTTGCAGGTaGAACGGACGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETWPPCR*NGRCWS
Trigger: GCTCCAGCACCGTCCGTTTCACCTGCAAGGAGGCCA...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGGCCACCACCTTTCTaGCATTGCCCTCCATGTACT +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPWPPPF*HCPPCT
Trigger: AGTACATGGAGGGCAATGTCAGAAAGGTGGTGGCCA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCAGGCCAATCTGGTCTaGTTTTGGGAGTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAQANLV*FWEWVG
Trigger: CCCTACCCACTCCCAAAATCAGACCAGATTGGCCTG...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTGGTGGGCCAGCTCATaGGCAATCACAGTGACCACC +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIWWASS*AITVTT
Trigger: GGTGGTCACTGTGATTGCTCATGAGCTGGCCCACCA...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGTCCCCGTGCTGGTATCCACCGTGATGACCGGGAAGCCCATCTGCAGGGTCCACATTGCCTGATGTGCTaGAGAGATCGTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GPRAGIHRDDREAHLQGPHCLMC*RDRSGL
Trigger: GAGCCCAGAACGATCTCTTCAGCACATCAGGCAATG...TGGACCCTGCAGATGGGCTTCCCGGTCATCACGGTGGATACCAGCACGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR TCA 90 bp TCCACCGTGATGACCGGGAAGCCCATCTGCAGGGTCCAGCGGTTCATGATGTCCTGTTCAGCGCCAGAGTaGCAGGGACCTTATGGGCAC +
Preference number: 4 (lower is better)
Translates to: STVMTGKPICRVQRFMMSCSAPE*QGPYGH
Trigger: GTGCCCATAAGGTCCCTGTCACTCTGGCGCTGAACA...GGACATCATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGTCATCACGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR TCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTGCTTGTCAGCCTCATTaGCCAGTGTGGCATTTCGGA +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPACQPH*PVWHFG
Trigger: TCCGAAATGCCACACTGGTCAATGAGGCTGACAAGC...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTGATTGTGCACACGGCTaGCACGCCCAGGAGGATCCC +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCDCAHG*HAQEDP
Trigger: GGGATCCTCCTGGGCGTGGCAGCCGTGTGCACAATC...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTGCCCGCCAGGTCATCTaGCAACTCCCCCTCGAACTC +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCARQVI*QLPLEL
Trigger: GAGTTCGAGGGGGAGTTGGCAGATGACCTGGCGGGC...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCCTCCATGTACTCGCTaGGGTAGAAGCCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGPPCTR*GRSPPG
Trigger: ACCTGGCGGGCTTCTACCGCAGCGAGTACATGGAGG...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCGGGCATCTGCAGCCTaGATCTGTGTAGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLRASAA*ICVVAT
Trigger: GGTGGCCACTACACAGATGCAGGCTGCAGATGCCCG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGACCCGCTCCTTGTTGCTaGTGGAGGAGGACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGPAPCC*WRRTGG
Trigger: ACCCCCTGTCCTCCTCCAGCAGCAACAAGGAGCGGG...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGGCCAGTGCATCCACTaGCATCACGCGGTACACATC +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRGQCIH*HHAVHI
Trigger: GATGTGTACCGCGTGATGGCAGTGGATGCACTGGCC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCGGCCAGTGCATCCACTaGCATCACGCGGTACACATC +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIGQCIH*HHAVHI
Trigger: GATGTGTACCGCGTGATGGCAGTGGATGCACTGGCC...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTGTGGGAGGAGGCCAGTaGATCCACTGCCATCACGCG +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETVGGGQ*IHCHHA
Trigger: CGCGTGATGGCAGTGGATGCACTGGCCTCCTCCCAC...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAGGACTGAGGCGCCCTTaGTGTAGGAGATGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSGLRRP*CRRWRQ
Trigger: TTGACGCCATCTCCTACAGCAAGGGCGCCTCAGTCC...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAACCGGGAAGCCCATCTaGAGGGTCCAGCGGTTCATG +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRTGKPI*RVQRFM
Trigger: CATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGACCGGGAAGCCCATCTaGAGGGTCCAGCGGTTCATG +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGTGKPI*RVQRFM
Trigger: CATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGT...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCGTGGCATTTCGGAACTaGTCCCAGGCGAAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIVAFRN*SQAKSH
Trigger: GTGGGACTTCGCCTGGGAGCAGTTCCGAAATGCCAC...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGTCCACAACTCTTTGCTaGAGGCCAGGGCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSSTTLC*RPGLPG
Trigger: TCCGGGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGA...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGGGATCCACAACTCTTTaGTGCAGGCCAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGGSTTL*CRPGLP
Trigger: GGGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGATCC...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAGTAGAGGTGGCGTCCTaGTTCCGGATTAAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSVEVAS*FRIKSG
Trigger: CCCGGACTTAATCCGGAAGCAGGACGCCACCTCTAC...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTGTAGAGGTGGCGTCCTaGTTCCGGATTAAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAVEVAS*FRIKSG
Trigger: CCCGGACTTAATCCGGAAGCAGGACGCCACCTCTAC...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCGTAGAGGTGGCGTCCTaGTTCCGGATTAAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIVEVAS*FRIKSG
Trigger: CCCGGACTTAATCCGGAAGCAGGACGCCACCTCTAC...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCAAAGCTTCTTCCAGTTaGTCTGGACAAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRKASSS*SGQSPR
Trigger: TCTGGGACTTTGTCCAGAGCAACTGGAAGAAGCTTT...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGTTCTTGTTCTTCTCCTaGGAGTACACCACTGACAGT +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPFLFFS*EYTTDS
Trigger: ACTGTCAGTGGTGTACTCCCAGGAGAAGAACAAGAA...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTTCCACGCTTTACTTTaGTCCAAGGTGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPFHALL*SKVVAE
Trigger: CTCGGCCACCACCTTGGACCAAAGTAAAGCGTGGAA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGACGGGTTTCAGCGTGTTaGGGAGGCGGTAACGATTCC +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRRVSAC*GGGNDS
Trigger: GGAATCGTTACCGCCTCCCCAACACGCTGAAACCCG...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCGGGTTTCAGCGTGTTaGGGAGGCGGTAACGATTCC +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRARVSAC*GGGNDS
Trigger: GGAATCGTTACCGCCTCCCCAACACGCTGAAACCCG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCCACCAGGTACTCGGTaGGCTCCACCAGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLPPGTR*APPAQS
Trigger: AGACTGAGCTGGTGGAGCCCACCGAGTACCTGGTGG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGGGTGCTGGGACCTTTaGGAAGCATGTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRGCWDL*EACWTG
Trigger: CCCTGTCCAACATGCTTCCCAAAGGTCCCAGCACCC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGGAAGTGGGGTGCTaGGACCTTTGGGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEALEVGC*DLWEAC
Trigger: ACATGCTTCCCAAAGGTCCCAGCACCCCACTTCCAG...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGTCCCCAGTTCTCCATGGCGCCGGCGTTGAAGTCTGGCAGGCCAATCTGGTCCTGGAAGTGGGGTGCTaGGACCTTTGGGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: QSPVLHGAGVEVWQANLVLEVGC*DLWEAC
Trigger: ACATGCTTCCCAAAGGTCCCAGCACCCCACTTCCAG...GACCAGATTGGCCTGCCAGACTTCAACGCCGGCGCCATGGAGAACTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CCA 90 bp TGGCACAGGGATGAAGAGAACGGGAAGACCCCTCAAGCCGGGGCCAGCCCACGTTCTGGCAGGCCAATCTaGTCTGATTTTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WHRDEENGKTPQAGASPRSGRPI*SDFGSG
Trigger: CCCACTCCCAAAATCAGACCAGATTGGCCTGCCAGA...ACGTGGGCTGGCCCCGGCTTGAGGGGTCTTCCCGTTCTCTTCATCCCTGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGGAGGAAGTGCTCCTaGGAAAGGGTCCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSRRKCS*ERVPVL
Trigger: CAGCACGGGGACCCTTTCCCAGGAGCACTTCCTCCT...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCCTGAAGAGATCGTTCTaGGCTCTTACATCTATCAGC +
Preference number: 4 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRLKRSF*ALTSIS
Trigger: GCTGATAGATGTAAGAGCCCAGAACGATCTCTTCAG...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTCAGGTAGTTCTTCATaGGGCCATAGACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPSGSSS*GHRPRS
Trigger: GCTCCGAGGTCTATGGCCCCATGAAGAACTACCTGA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCGGTGGACCGCAGGTTaGGGTGGATCGGGTTATTAT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEARWTAG*GGSGYY
Trigger: ATAATAACCCGATCCACCCCAACCTGCGGTCCACCG...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCGTTGCAGTAGACGGTaGACCGCAGGTTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSRCSRR*TAGWGG
Trigger: TCCACCCCAACCTGCGGTCCACCGTCTACTGCAACG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCGTTGCAGTAGACGGTaGACCGCAGGTTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGRCSRR*TAGWGG
Trigger: TCCACCCCAACCTGCGGTCCACCGTCTACTGCAACG...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTGCAGCTCATACTCGGTaGAGAATCGTCGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPAAHTR*RIVVSL
Trigger: CAGTGACACGACGATTCTCCACCGAGTATGAGCTGC...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGTGTGGGCACCTTGCATaGGGGCCGGGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGCGHLA*GPGDFK
Trigger: CTTGAAGTCACCCGGCCCCCATGCAAGGTGCCCACA...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGTGGGATGGACACATGTaGGCACCTTGCATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSWDGHM*APCMGA
Trigger: GGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCA...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACACCAGCCGCTGGGATaGACACATGTGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRHQPLG*THVGTL
Trigger: CAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCACCAGCCGCTGGGATaGACACATGTGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGHQPLG*THVGTL
Trigger: CAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTG...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGATCTGGCCCTGGAGCTaGGCTTCCCTGAGATCAGCC +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSIWPWS*ASLRSA
Trigger: GGCTGATCTCAGGGAAGCCCAGCTCCAGGGCCAGAT...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CCGCAATGGCACTGGGCCGGGCCCAGATCCGGATCTGAAATCACTCAGAGGTGGCACGTGAAGGAGAGATaGGCCCAGCCTCATACCAAG +
Preference number: 4 (lower is better)
Translates to: PQWHWAGPRSGSEITQRWHVKER*AQPHTK
Trigger: CTTGGTATGAGGCTGGGCCCATCTCTCCTTCACGTG...CCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCATGCCCCGGCATCTTaGCCGGGTTGTAGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCHAPAS*PGCRSE
Trigger: CTCGCTCCTACAACCCGGCCAAGATGCCGGGGCATG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679248.1
CDS-3UTR TCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCTGGCCACCACCTTTCTaGCATTGCCCTCCATGTACT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAWPPPF*HCPPCT
Trigger: AGTACATGGAGGGCAATGTCAGAAAGGTGGTGGCCA...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCTGGTGGGCCAGCTCATaGGCAATCACAGTGACCACC +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLWWASS*AITVTT
Trigger: GGTGGTCACTGTGATTGCTCATGAGCTGGCCCACCA...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGAGCATCCTGAGGACTaGGGCGCCCTTGCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGEHPED*GALAVG
Trigger: TCCTACAGCAAGGGCGCCTCAGTCCTCAGGATGCTC...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTACGCCAGGCCCTGCTTaGATACGTCCTCGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETTPGPA*IRPRTG
Trigger: TCCTGTCCGAGGACGTATTCAAGCAGGGCCTGGCGT...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTACGCCAGGCCCTGCTTaGATACGTCCTCGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCTPGPA*IRPRTG
Trigger: TCCTGTCCGAGGACGTATTCAAGCAGGGCCTGGCGT...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCAATAGCCCGTCACATTaGGGTTCAGCAGGACCCACT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEANSPSH*GSAGPT
Trigger: AGTGGGTCCTGCTGAACCTCAATGTGACGGGCTATT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCTGTTCAGCGCCAGAGTaGCAGGGACCTTATGGGCAC +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLCSAPE*QGPYGH
Trigger: GTGCCCATAAGGTCCCTGTCACTCTGGCGCTGAACA...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTAGGGAGCCCTTGAGGTaGACCACCAGGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCREPLR*TTRYSV
Trigger: CACCGAGTACCTGGTGGTGCACCTCAAGGGCTCCCT...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCTCCATGTACTCGCTaGGGTAGAAGCCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCPPCTR*GRSPPG
Trigger: ACCTGGCGGGCTTCTACCGCAGCGAGTACATGGAGG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCTTCTGGAAGTGGGGTaGTGGGACCTTTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRALLEVG*WDLWEA
Trigger: TGCTTCCCAAAGGTCCCAGCACCCCACTTCCAGAAG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTCAAGACACCATTGGATaGCTGCTTCTCCACGTAGTC +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPQDTIG*LLLHVV
Trigger: GACTACGTGGAGAAGCAGGCATCCAATGGTGTCTTG...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGACTGAGGCGCCCTTaGTGTAGGAGATGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLGLRRP*CRRWRQ
Trigger: TTGACGCCATCTCCTACAGCAAGGGCGCCTCAGTCC...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGGGACTGAGGCGCCCTTaGTGTAGGAGATGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGGLRRP*CRRWRQ
Trigger: TTGACGCCATCTCCTACAGCAAGGGCGCCTCAGTCC...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATTGTTCACAGCCTCCTaGAGGTGGTCCCACAGGTTC +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSLFTAS*RWSHRF
Trigger: GAACCTGTGGGACCACCTGCAGGAGGCTGTGAACAA...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTTGTTCACAGCCTCCTaGAGGTGGTCCCACAGGTTC +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRALFTAS*RWSHRF
Trigger: GAACCTGTGGGACCACCTGCAGGAGGCTGTGAACAA...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTACCGGGAAGCCCATCTaGAGGGTCCAGCGGTTCATG +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCTGKPI*RVQRFM
Trigger: CATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGT...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGGTCAAGGAGGAAGTaGTCCTGGGAAAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGGSRRK*SWERVP
Trigger: GGGGACCCTTTCCCAGGAGCACTTCCTCCTTGACCC...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGGTGGCATTTCGGAACTaGTCCCAGGCGAAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSVAFRN*SQAKSH
Trigger: GTGGGACTTCGCCTGGGAGCAGTTCCGAAATGCCAC...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGTGGCATTTCGGAACTaGTCCCAGGCGAAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRVAFRN*SQAKSH
Trigger: GTGGGACTTCGCCTGGGAGCAGTTCCGAAATGCCAC...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTGGATCCACAACTCTTTaGTGCAGGCCAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCGSTTL*CRPGLP
Trigger: GGGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGATCC...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTAACTGCTCCAGCTGCTaGAGCTCATACTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRANCSSC*SSYSVE
Trigger: CTCCACCGAGTATGAGCTGCAGCAGCTGGAGCAGTT...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCTTGAACTGCTCCAGCTaGTGCAGCTCATACTCGGTG +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEALNCSS*CSSYSV
Trigger: CACCGAGTATGAGCTGCAGCAGCTGGAGCAGTTCAA...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTCCATCGAGAGCTTCTaGTCATCTGGCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLISIESF*SSGPGA
Trigger: AGCTCCAGGGCCAGATGAGCAGAAGCTCTCGATGGA...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGTCCATCGAGAGCTTCTaGTCATCTGGCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGSIESF*SSGPGA
Trigger: AGCTCCAGGGCCAGATGAGCAGAAGCTCTCGATGGA...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGCATTGCATTGATCTaGTTGAGAGCTGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLGIALI*LRAGPP
Trigger: CGGCGGCCCAGCTCTCAAGCAGATCAATGCAATGCC...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS-3UTR GCA 90 bp CAGGAAGAGGGTGTTGTTCAGCGCCAGAGTGACAGGGACCTTATGGGCACTGGCGAGCGGGCTGCACCTTaGTGTAGGAGATGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: QEEGVVQRQSDRDLMGTGERAAP*CRRWRQ
Trigger: TTGACGCCATCTCCTACAGCAAGGTGCAGCCCGCTC...GCCAGTGCCCATAAGGTCCCTGTCACTCTGGCGCTGAACAACACCCTCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTCTTCACTGAGAGCTaGGGCGGAGGCTTTAGACCG +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGLFTES*GGGFRP
Trigger: CGGTCTAAAGCCTCCGCCGCAGCTCTCAGTGAAGAG...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCGGCTCATCGAAGCATaGGAAGGACTTCCGGGCATC +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLRLIEA*EGLPGI
Trigger: GATGCCCGGAAGTCCTTCCCATGCTTCGATGAGCCG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCGGCTCATCGAAGCATaGGAAGGACTTCCGGGCATC +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSRLIEA*EGLPGI
Trigger: GATGCCCGGAAGTCCTTCCCATGCTTCGATGAGCCG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGGGTGCTGGGACCTTTaGGAAGCATGTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRGCWDL*EACWTG
Trigger: CCCTGTCCAACATGCTTCCCAAAGGTCCCAGCACCC...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCCTGGAAGTGGGGTGCTaGGACCTTTGGGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLILEVGC*DLWEAC
Trigger: ACATGCTTCCCAAAGGTCCCAGCACCCCACTTCCAG...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGGATGAAGAGAACGGGAAGACCCCTCAAGCCGGGGCCAGCCCACGTGAAGGAGATCTTGGGCGTGGTGTaGAACTCAGTGACATTCCAG +
Preference number: 4 (lower is better)
Translates to: GMKRTGRPLKPGPAHVKEILGVV*NSVTFQ
Trigger: CTGGAATGTCACTGAGTTCCACACCACGCCCAAGAT...CTCCTTCACGTGGGCTGGCCCCGGCTTGAGGGGTCTTCCCGTTCTCTTCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCAGTACGTGGACATCTTaGGCGTGGTGTGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEASTWTS*AWCGTQ
Trigger: CTGAGTTCCACACCACGCCCAAGATGTCCACGTACT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAAGGCCAGCAAGTACGTaGACATCTTGGGCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRRPAST*TSWAWC
Trigger: ACACCACGCCCAAGATGTCCACGTACTTGCTGGCCT...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCAGGCCAGCAAGTACGTaGACATCTTGGGCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIRPAST*TSWAWC
Trigger: ACACCACGCCCAAGATGTCCACGTACTTGCTGGCCT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTGGGGAGTTGGATGGACCGGTTGTTCACAGCCTCCTGCAGGTGGTCCCACAGGCTTTCAAGTTCCAGGTaGGCTCCGCATAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: VGSWMDRLFTASCRWSHRLSSSR*APHSQH
Trigger: GTGCTGACTATGCGGAGCCCACCTGGAACTTGAAAG...CCTGTGGGACCACCTGCAGGAGGCTGTGAACAACCGGTCCATCCAACTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CCA 90 bp TCCACCGTGATGACCGGGAAGCCCATCTGCAGGGTCCAGCGGTTCATGATGTCCAACAGCTCACTGATCTaGGCCGGCGTGTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: STVMTGKPICRVQRFMMSNSSLI*AGVLIS
Trigger: GGAGATCAACACGCCGGCCCAGATCAGTGAGCTGTT...GGACATCATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGTCATCACGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTAACAGCTCACTGATCTaGGCCGGCGTGTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRANSSLI*AGVLIS
Trigger: GGAGATCAACACGCCGGCCCAGATCAGTGAGCTGTT...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGTGGTGGGGAGTTGGATaGACCGGTTGTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGWWGVG*TGCSQP
Trigger: AGGCTGTGAACAACCGGTCCATCCAACTCCCCACCA...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ATCTGCAGGGTCCAGCGGTTCATGATGTCCCGCACGGTGGTGGGGAGTTGGATGACGGTGGTGGGGAGTTaGATGGACCGGTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: ICRVQRFMMSRTVVGSWMTVVGS*MDRLFT
Trigger: TGTGAACAACCGGTCCATCCAACTCCCCACCACCGT...CATCCAACTCCCCACCACCGTGCGGGACATCATGAACCGCTGGACCCTGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAAGGAGGAAGTGCTCCTaGGAAAGGGTCCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGRRKCS*ERVPVL
Trigger: CAGCACGGGGACCCTTTCCCAGGAGCACTTCCTCCT...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTAGGAGGAAGTGCTCCTaGGAAAGGGTCCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETRRKCS*ERVPVL
Trigger: CAGCACGGGGACCCTTTCCCAGGAGCACTTCCTCCT...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ATCTGCAGGGTCCAGCGGTTCATGATGTCCCGCACGGTGGTGGGGAGTTGGATGGTGACAGGGACCTTATaGGCACTGGCCAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ICRVQRFMMSRTVVGSWMVTGTL*ALARLK
Trigger: CTTCAACCTGGCCAGTGCCCATAAGGTCCCTGTCAC...CATCCAACTCCCCACCACCGTGCGGGACATCATGAACCGCTGGACCCTGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGACATCTCCTCACACTCTaGAACTCCGTTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRHLLTL*NSVGAG
Trigger: GCCTGCTCCAACGGAGTTCCAGAGTGTGAGGAGATG...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCCATCTCCTCACACTCTaGAACTCCGTTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIHLLTL*NSVGAG
Trigger: GCCTGCTCCAACGGAGTTCCAGAGTGTGAGGAGATG...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCGTTGCAGTAGACGGTaGACCGCAGGTTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCRCSRR*TAGWGG
Trigger: TCCACCCCAACCTGCGGTCCACCGTCTACTGCAACG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCGCAGCTCATACTCGGTaGAGAATCGTCGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAAAHTR*RIVVSL
Trigger: CAGTGACACGACGATTCTCCACCGAGTATGAGCTGC...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTTTGAGGGGAGGACACTaGTGCCTCGGGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCLRGGH*CLGLQE
Trigger: TTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAA...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGATTGAGGGGAGGACACTaGTGCCTCGGGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGLRGGH*CLGLQE
Trigger: TTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAA...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTCATCAGGAACTAGACTaGCTCACAGGCAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPHQELD*LTGREN
Trigger: GTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATG...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCTGGGAGTACACCACTaGCAGTGCGATGATTGTGCA +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRALGVHH*QCDDCA
Trigger: TGCACAATCATCGCACTGTCAGTGGTGTACTCCCAG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCCTGGGAGTACACCACTaGCAGTGCGATGATTGTGCA +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLILGVHH*QCDDCA
Trigger: TGCACAATCATCGCACTGTCAGTGGTGTACTCCCAG...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCAGGCCAATCTGGTCTaGTTTTGGGAGTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSQANLV*FWEWVG
Trigger: CCCTACCCACTCCCAAAATCAGACCAGATTGGCCTG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCATGAGCAATCACAGTaGCCACCCGCTCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGHEQSQ*PPAPCC
Trigger: GCAACAAGGAGCGGGTGGTCACTGTGATTGCTCATG...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CATGATGTCCCGCACGGTGGTGGGGAGTTGGATGGACCGGTTGTTCACAGCCTCAATAGCCCGTCACATTaGGGTTCAGCAGGACCCACT +
Preference number: 4 (lower is better)
Translates to: HDVPHGGGELDGPVVHSLNSPSH*GSAGPT
Trigger: AGTGGGTCCTGCTGAACCTCAATGTGACGGGCTATT...GAGGCTGTGAACAACCGGTCCATCCAACTCCCCACCACCGTGCGGGACATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR TCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAAATAGCCCGTCACATTaGGGTTCAGCAGGACCCACT +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSNSPSH*GSAGPT
Trigger: AGTGGGTCCTGCTGAACCTCAATGTGACGGGCTATT...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTGTTCAGCGCCAGAGTaGCAGGGACCTTATGGGCAC +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETCSAPE*QGPYGH
Trigger: GTGCCCATAAGGTCCCTGTCACTCTGGCGCTGAACA...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGTGTCACTGCCTGGATaGGGTTGGAGAAGGAGAACG +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRVSLPG*GWRRRT
Trigger: CGTTCTCCTTCTCCAACCTCATCCAGGCAGTGACAC...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTTGGAGACTTTGTCCTTaGGGGGAGGACACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCWRLCP*GEDTGA
Trigger: GGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCA...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp ATTAATGATCTGTGCCCGATTGATGACAGGGATGGCCGAGTGGTCTCTCTGCAGGAGCATCCTGAGGACTaGGGCGCCCTCCTTCCCCGT +
Preference number: 4 (lower is better)
Translates to: INDLCPIDDRDGRVVSLQEHPED*GALLPR
Trigger: ACGGGGAAGGAGGGCGCCTCAGTCCTCAGGATGCTC...CTGCAGAGAGACCACTCGGCCATCCCTGTCATCAATCGGGCACAGATCATTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR TCA 90 bp ACAGGGACCTTATGGGCACTGGCCAGGTTGAAGGCGTCATTAATGATCTGTGCCAGCTGGAGAGCATCCTaGGGACTGAGGCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TGTLWALARLKASLMICASWRAS*GLRRPP
Trigger: AGGAGGGCGCCTCAGTCCTCAGGATGCTCTCCAGCT...GGCACAGATCATTAATGACGCCTTCAACCTGGCCAGTGCCCATAAGGTCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR GCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGGAGGATCCCCAGGATaGCCAGGGACTTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRGGSPG*PGTWKY
Trigger: ATATTTCCAAGTCCCTGGGCATCCTGGGGATCCTCC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACTTCTGGAAGTGGGGTaGTGGGACCTTTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRLLEVG*WDLWEA
Trigger: TGCTTCCCAAAGGTCCCAGCACCCCACTTCCAGAAG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTGGCCAGTGCATCCACTaGCATCACGCGGTACACATC +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETGQCIH*HHAVHI
Trigger: GATGTGTACCGCGTGATGGCAGTGGATGCACTGGCC...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGTTGTTCACAGCCTCCTaGAGGTGGTCCCACAGGTTC +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGLFTAS*RWSHRF
Trigger: GAACCTGTGGGACCACCTGCAGGAGGCTGTGAACAA...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CAGGAAGAGGGTGTTGTTCAGCGCCAGAGTGACAGGGACCTTATGGGCACTGGCTTGTTCACAGCCTCCTaGAGGTGGTCCCACAGGTTC +
Preference number: 4 (lower is better)
Translates to: QEEGVVQRQSDRDLMGTGLFTAS*RWSHRF
Trigger: GAACCTGTGGGACCACCTGCAGGAGGCTGTGAACAA...GCCAGTGCCCATAAGGTCCCTGTCACTCTGGCGCTGAACAACACCCTCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCGGGTTCTCCATCCACTaGTTGAAAAGGCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIGFSIH*LKRPET
Trigger: GGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAACCC...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGTAGAGGTGGCGTCCTaGTTCCGGATTAAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGVEVAS*FRIKSG
Trigger: CCCGGACTTAATCCGGAAGCAGGACGCCACCTCTAC...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAAACTGCTCCAGCTGCTaGAGCTCATACTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRNCSSC*SSYSVE
Trigger: CTCCACCGAGTATGAGCTGCAGCAGCTGGAGCAGTT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGTCCATCGAGAGCTTCTaGTCATCTGGCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGSIESF*SSGPGA
Trigger: AGCTCCAGGGCCAGATGAGCAGAAGCTCTCGATGGA...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGAATATACAGATCTGCTaGCCTGTTGATTCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPNIQIC*PVDSSD
Trigger: ATCTGAGGAATCAACAGGGCAGCAGATCTGTATATT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGGCGGCCAGGTGGCATTaGATTGATCTGCTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGAARWH*IDLLES
Trigger: GCTCTCAAGCAGATCAATGCAATGCCACCTGGCCGC...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS-3UTR GCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGCAGTAGCACGACCTTaGGAAAAAGCACCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRAVARP*EKAPES
Trigger: CGACTCCGGTGCTTTTTCGCAAGGTCGTGCTACTGC...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559874.2
CDS-3UTR CCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCCACGGGGGAGCTGTTaGCGTTCTTGTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGPRGSC*RSCSSP
Trigger: AGGAGAAGAACAAGAACGCCAACAGCTCCCCCGTGG...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCCACGGGGGAGCTGTTaGCGTTCTTGTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLPRGSC*RSCSSP
Trigger: AGGAGAAGAACAAGAACGCCAACAGCTCCCCCGTGG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCGGGTTTCAGCGTGTTaGGGAGGCGGTAACGATTCC +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETRVSAC*GGGNDS
Trigger: GGAATCGTTACCGCCTCCCCAACACGCTGAAACCCG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCACTGTCCATCTCATACTaGCTGTCCTTCACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSLSISY*LSFTRE
Trigger: CTCCCTGGTGAAGGACAGCCAGTATGAGATGGACAG...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGACGGCTCATCGAAGCATaGGAAGGACTTCCGGGCATC +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGRLIEA*EGLPGI
Trigger: GATGCCCGGAAGTCCTTCCCATGCTTCGATGAGCCG...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCGGCTCATCGAAGCATaGGAAGGACTTCCGGGCATC +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETRLIEA*EGLPGI
Trigger: GATGCCCGGAAGTCCTTCCCATGCTTCGATGAGCCG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCTGGAAGTGGGGTGCTaGGACCTTTGGGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLLEVGC*DLWEAC
Trigger: ACATGCTTCCCAAAGGTCCCAGCACCCCACTTCCAG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAAGTACGTGGACATCTTaGGCGTGGTGTGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRSTWTS*AWCGTQ
Trigger: CTGAGTTCCACACCACGCCCAAGATGTCCACGTACT...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCAGTACGTGGACATCTTaGGCGTGGTGTGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLISTWTS*AWCGTQ
Trigger: CTGAGTTCCACACCACGCCCAAGATGTCCACGTACT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAAGGCCAGCAAGTACGTaGACATCTTGGGCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRRPAST*TSWAWC
Trigger: ACACCACGCCCAAGATGTCCACGTACTTGCTGGCCT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGACTTTCAAGTTCCAGGTaGGCTCCGCATAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRLSSSR*APHSQH
Trigger: GTGCTGACTATGCGGAGCCCACCTGGAACTTGAAAG...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTTTCAAGTTCCAGGTaGGCTCCGCATAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGLSSSR*APHSQH
Trigger: GTGCTGACTATGCGGAGCCCACCTGGAACTTGAAAG...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAAACAGCTCACTGATCTaGGCCGGCGTGTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRNSSLI*AGVLIS
Trigger: GGAGATCAACACGCCGGCCCAGATCAGTGAGCTGTT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCAACAGCTCACTGATCTaGGCCGGCGTGTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLNSSLI*AGVLIS
Trigger: GGAGATCAACACGCCGGCCCAGATCAGTGAGCTGTT...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGTGGTGGGGAGTTGGATaGACCGGTTGTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSWWGVG*TGCSQP
Trigger: AGGCTGTGAACAACCGGTCCATCCAACTCCCCACCA...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACGGTGGTGGGGAGTTaGATGGACCGGTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSTVVGS*MDRLFT
Trigger: TGTGAACAACCGGTCCATCCAACTCCCCACCACCGT...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ACAGGGACCTTATGGGCACTGGCCAGGTTGAAGGCGTCATTAATGATCTGTGCCTGTCCCGCACGGTGGTaGGGAGTTGGATGGACCGGT +
Preference number: 4 (lower is better)
Translates to: TGTLWALARLKASLMICACPARW*GVGWTG
Trigger: ACCGGTCCATCCAACTCCCCACCACCGTGCGGGACA...GGCACAGATCATTAATGACGCCTTCAACCTGGCCAGTGCCCATAAGGTCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGGTGACAGGGACCTTATaGGCACTGGCCAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGVTGTL*ALARLK
Trigger: CTTCAACCTGGCCAGTGCCCATAAGGTCCCTGTCAC...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCAGGTAGTTCTTCATaGGGCCATAGACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRASGSSS*GHRPRS
Trigger: GCTCCGAGGTCTATGGCCCCATGAAGAACTACCTGA...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTGTCCATCAGGTTTTCTaGGATCTCCCTCCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPVHQVF*DLPPVV
Trigger: AACAACTGGAGGGAGATCCCAGAAAACCTGATGGAC...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCATCTCCTCACACTCTaGAACTCCGTTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLHLLTL*NSVGAG
Trigger: GCCTGCTCCAACGGAGTTCCAGAGTGTGAGGAGATG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACGGTGGACCGCAGGTTaGGGTGGATCGGGTTATTAT +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRRWTAG*GGSGYY
Trigger: ATAATAACCCGATCCACCCCAACCTGCGGTCCACCG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCGTCGTGTCACTGCCTaGATGAGGTTGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSRRVTA*MRLEKE
Trigger: CTCCTTCTCCAACCTCATCCAGGCAGTGACACGACG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTTTTCTGTGAACCACTaGAGCACCACCTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPFSVNH*STTSLF
Trigger: GAACAAGGAGGTGGTGCTCCAGTGGTTCACAGAAAA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCAAGCAAGCGGCCAGGTaGCATTGCATTGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAKQAAR*HCIDLL
Trigger: AAGCAGATCAATGCAATGCCACCTGGCCGCTTGCTT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS-3UTR TCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGTGGCCACCACCTTTCTaGCATTGCCCTCCATGTACT +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGWPPPF*HCPPCT
Trigger: AGTACATGGAGGGCAATGTCAGAAAGGTGGTGGCCA...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGACAGGCCAATCTGGTCTaGTTTTGGGAGTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGQANLV*FWEWVG
Trigger: CCCTACCCACTCCCAAAATCAGACCAGATTGGCCTG...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGACATGAGCAATCACAGTaGCCACCCGCTCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGHEQSQ*PPAPCC
Trigger: GCAACAAGGAGCGGGTGGTCACTGTGATTGCTCATG...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp TTATGGGCACTGGCCAGGTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGGGGTCCAGCGGTTCATaGTGTCCCGCACGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LWALARLKASLMICARLMGSSGS*CPARWW
Trigger: CCACCACCGTGCGGGACATCATGAACCGCTGGACCC...CATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGCCAGTGCCCATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR TCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACATTGCCTGATGTGCTaGAGAGATCGTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRHCLMC*RDRSGL
Trigger: GAGCCCAGAACGATCTCTTCAGCACATCAGGCAATG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGGACCCACTCATTGCCTaGTGTGCTGAAGAGATCGTT +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGDPLIA*CAEEIV
Trigger: AACGATCTCTTCAGCACATCAGGCAATGAGTGGGTC...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTCCATCCACTGCTTaGAAAGGCCAGAGACCATCT +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRASPSTA*KGQRPS
Trigger: AGATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGA...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTCTCCATCCACTGCTTaGAAAGGCCAGAGACCATCT +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLISPSTA*KGQRPS
Trigger: AGATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGA...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGGCTTGTCAGCCTCATTaGCCAGTGTGGCATTTCGGA +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGACQPH*PVWHFG
Trigger: TCCGAAATGCCACACTGGTCAATGAGGCTGACAAGC...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGGCTTGTCAGCCTCATTaGCCAGTGTGGCATTTCGGA +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSACQPH*PVWHFG
Trigger: TCCGAAATGCCACACTGGTCAATGAGGCTGACAAGC...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGGGAGGATCCCCAGGATaGCCAGGGACTTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSGGSPG*PGTWKY
Trigger: ATATTTCCAAGTCCCTGGGCATCCTGGGGATCCTCC...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGGGAGGATCCCCAGGATaGCCAGGGACTTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGGGSPG*PGTWKY
Trigger: ATATTTCCAAGTCCCTGGGCATCCTGGGGATCCTCC...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCACAAGACACCATTGGATaGCTGCTTCTCCACGTAGTC +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSQDTIG*LLLHVV
Trigger: GACTACGTGGAGAAGCAGGCATCCAATGGTGTCTTG...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CTGGCAGGCCAATCTGGTCTGATTTTGGGAGTGGGTAGGGTGTGTCATAATGACCCACCCGCTCCTTGTTaGTGCTGGAGGAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LAGQSGLILGVGRVCHNDPPAPC*CWRRTG
Trigger: CCCTGTCCTCCTCCAGCAGCAACAAGGAGCGGGTGG...GTCATTATGACACACCCTACCCACTCCCAAAATCAGACCAGATTGGCCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR GCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTTCACAGCCTCCTaGAGGTGGTCCCACAGGTTC +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETLFTAS*RWSHRF
Trigger: GAACCTGTGGGACCACCTGCAGGAGGCTGTGAACAA...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGTTCTCCATCCACTaGTTGAAAAGGCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLGFSIH*LKRPET
Trigger: GGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAACCC...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTCCCAGACCAGACCTTaGCCAATGACGTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLISQTRP*PMTLLV
Trigger: TACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGA...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCCCAGACCAGACCTTaGCCAATGACGTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSSQTRP*PMTLLV
Trigger: TACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGA...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAGAATCGTCGTGTCACTaGCTGGATGAGGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSESSCH*LDEVGE
Trigger: TTCTCCAACCTCATCCAGGCAGTGACACGACGATTC...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCGAATCGTCGTGTCACTaGCTGGATGAGGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIESSCH*LDEVGE
Trigger: TTCTCCAACCTCATCCAGGCAGTGACACGACGATTC...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGTTGAACTGCTCCAGCTaGTGCAGCTCATACTCGGTG +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSLNCSS*CSSYSV
Trigger: CACCGAGTATGAGCTGCAGCAGCTGGAGCAGTTCAA...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCTTGAACTGCTCCAGCTaGTGCAGCTCATACTCGGTG +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLLNCSS*CSSYSV
Trigger: CACCGAGTATGAGCTGCAGCAGCTGGAGCAGTTCAA...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCCCACAACAGGCAGACTaGGCAAAAATTAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIPQQAD*AKINQG
Trigger: GCCCTGGTTAATTTTTGCCCAGTCTGCCTGTTGTGG...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCCACAACAGGCAGACTaGGCAAAAATTAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGPQQAD*AKINQG
Trigger: GCCCTGGTTAATTTTTGCCCAGTCTGCCTGTTGTGG...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGACCACGGGGGAGCTGTTaGCGTTCTTGTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGPRGSC*RSCSSP
Trigger: AGGAGAAGAACAAGAACGCCAACAGCTCCCCCGTGG...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGTTCCACGCTTTACTTTaGTCCAAGGTGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSFHALL*SKVVAE
Trigger: CTCGGCCACCACCTTGGACCAAAGTAAAGCGTGGAA...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACTGTCCATCTCATACTaGCTGTCCTTCACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRLSISY*LSFTRE
Trigger: CTCCCTGGTGAAGGACAGCCAGTATGAGATGGACAG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAGTCAGGTCCTTGGGGTaGATAAGCGTGATGTTGAAC +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSVRSLG*ISVMLN
Trigger: GTTCAACATCACGCTTATCCACCCCAAGGACCTGAC...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCGTCAGGTCCTTGGGGTaGATAAGCGTGATGTTGAAC +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIVRSLG*ISVMLN
Trigger: GTTCAACATCACGCTTATCCACCCCAAGGACCTGAC...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCATCTTGGGCGTGGTGTaGAACTCAGTGACATTCCAG +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLIILGVV*NSVTFQ
Trigger: CTGGAATGTCACTGAGTTCCACACCACGCCCAAGAT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTAGGCCAGCAAGTACGTaGACATCTTGGGCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCRPAST*TSWAWC
Trigger: ACACCACGCCCAAGATGTCCACGTACTTGCTGGCCT...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAGGATCAAGACACCATTaGATGCCTGCTTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSGSRHH*MPASPR
Trigger: ACGTGGAGAAGCAGGCATCCAATGGTGTCTTGATCC...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCTCTGGCAGGCCAATCTaGTCTGATTTTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLSGRPI*SDFGSG
Trigger: CCCACTCCCAAAATCAGACCAGATTGGCCTGCCAGA...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGATCTGGCAGGCCAATCTaGTCTGATTTTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRSGRPI*SDFGSG
Trigger: CCCACTCCCAAAATCAGACCAGATTGGCCTGCCAGA...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCACAGGTTCAGGTAGATaGTGTTCTGGTAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEATGSGR*CSGRQR
Trigger: CCTTTGCCTACCAGAACACCATCTACCTGAACCTGT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGTCAGGTAGTTCTTCATaGGGCCATAGACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGSGSSS*GHRPRS
Trigger: GCTCCGAGGTCTATGGCCCCATGAAGAACTACCTGA...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCGTCCATCAGGTTTTCTaGGATCTCCCTCCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAVHQVF*DLPPVV
Trigger: AACAACTGGAGGGAGATCCCAGAAAACCTGATGGAC...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCGGATCGGGTTATTATTaGGGTTCTCCATCCACTGCT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAGSGYY*GSPSTA
Trigger: AGCAGTGGATGGAGAACCCCAATAATAACCCGATCC...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCGGTGGACCGCAGGTTaGGGTGGATCGGGTTATTAT +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETRWTAG*GGSGYY
Trigger: ATAATAACCCGATCCACCCCAACCTGCGGTCCACCG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCGGTGGACCGCAGGTTaGGGTGGATCGGGTTATTAT +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCRWTAG*GGSGYY
Trigger: ATAATAACCCGATCCACCCCAACCTGCGGTCCACCG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCTTCTTCCAGTTGCTCTaGACAAAGTCCCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAFFQLL*TKSQTR
Trigger: TCTGGTCTGGGACTTTGTCCAGAGCAACTGGAAGAA...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCGTCGTGTCACTGCCTaGATGAGGTTGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETRRVTA*MRLEKE
Trigger: CTCCTTCTCCAACCTCATCCAGGCAGTGACACGACG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGACGTCGTGTCACTGCCTaGATGAGGTTGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGRRVTA*MRLEKE
Trigger: CTCCTTCTCCAACCTCATCCAGGCAGTGACACGACG...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGCAGCTCATACTCGGTaGAGAATCGTCGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLAAHTR*RIVVSL
Trigger: CAGTGACACGACGATTCTCCACCGAGTATGAGCTGC...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGCAGCTCATACTCGGTaGAGAATCGTCGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRAAHTR*RIVVSL
Trigger: CAGTGACACGACGATTCTCCACCGAGTATGAGCTGC...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCTGGGAGTACACCACTaGCAGTGCGATGATTGTGCA +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETLGVHH*QCDDCA
Trigger: TGCACAATCATCGCACTGTCAGTGGTGTACTCCCAG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTTGGCCACCACCTTTCTaGCATTGCCCTCCATGTACT +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCWPPPF*HCPPCT
Trigger: AGTACATGGAGGGCAATGTCAGAAAGGTGGTGGCCA...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGTGGTGTGGAACTCAGTaGCATTCCAGTTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSWCGTQ*HSSWGL
Trigger: AAGACCCCAACTGGAATGTCACTGAGTTCCACACCA...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACACGTAGTTGAATTCTaGGGGGCGGGTAACATTGGA +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRHVVEF*GAGNIG
Trigger: TCCAATGTTACCCGCCCCTCAGAATTCAACTACGTG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCATTGCCTGATGTGCTaGAGAGATCGTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETHCLMC*RDRSGL
Trigger: GAGCCCAGAACGATCTCTTCAGCACATCAGGCAATG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CAGGAAGAGGGTGTTGTTCAGCGCCAGAGTGACAGGGACCTTATGGGCACTGGCGACCCACTCATTGCCTaGTGTGCTGAAGAGATCGTT +
Preference number: 4 (lower is better)
Translates to: QEEGVVQRQSDRDLMGTGDPLIA*CAEEIV
Trigger: AACGATCTCTTCAGCACATCAGGCAATGAGTGGGTC...GCCAGTGCCCATAAGGTCCCTGTCACTCTGGCGCTGAACAACACCCTCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR TCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGGACCCACTCATTGCCTaGTGTGCTGAAGAGATCGTT +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSDPLIA*CAEEIV
Trigger: AACGATCTCTTCAGCACATCAGGCAATGAGTGGGTC...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTAATAGCCCGTCACATTaGGGTTCAGCAGGACCCACT +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETNSPSH*GSAGPT
Trigger: AGTGGGTCCTGCTGAACCTCAATGTGACGGGCTATT...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGATCTCCATCCACTGCTTaGAAAGGCCAGAGACCATCT +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRSPSTA*KGQRPS
Trigger: AGATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGA...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTCCTTCACCCACTTaGTGTTGGCTTTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSSPSPT*CWLSSS
Trigger: AGAAGACGAAAGCCAACATCAAGTGGGTGAAGGAGA...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTCCTTCACCCACTTaGTGTTGGCTTTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRASPSPT*CWLSSS
Trigger: AGAAGACGAAAGCCAACATCAAGTGGGTGAAGGAGA...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTCTCCTTCACCCACTTaGTGTTGGCTTTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLISPSPT*CWLSSS
Trigger: AGAAGACGAAAGCCAACATCAAGTGGGTGAAGGAGA...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGATCTCCTTCACCCACTTaGTGTTGGCTTTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRSPSPT*CWLSSS
Trigger: AGAAGACGAAAGCCAACATCAAGTGGGTGAAGGAGA...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTGGGTTCTCCATCCACTaGTTGAAAAGGCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCGFSIH*LKRPET
Trigger: GGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAACCC...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGGTTCTCCATCCACTaGTTGAAAAGGCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGGFSIH*LKRPET
Trigger: GGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAACCC...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGATCCCAGACCAGACCTTaGCCAATGACGTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRSQTRP*PMTLLV
Trigger: TACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGA...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGTCCCAGACCAGACCTTaGCCAATGACGTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSSQTRP*PMTLLV
Trigger: TACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGA...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGGAATCGTCGTGTCACTaGCTGGATGAGGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSESSCH*LDEVGE
Trigger: TTCTCCAACCTCATCCAGGCAGTGACACGACGATTC...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGATTGTCCTTCTTGAACTaGTCCAGCTGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRLSFLN*SSCCSS
Trigger: TGAGCTGCAGCAGCTGGAGCAGTTCAAGAAGGACAA...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCCACAACAGGCAGACTaGGCAAAAATTAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLPQQAD*AKINQG
Trigger: GCCCTGGTTAATTTTTGCCCAGTCTGCCTGTTGTGG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGGGATGCCCAGGGACTTaGAAATATAGAAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGGCPGT*KYRSPW
Trigger: CCAAGGGCTTCTATATTTCCAAGTCCCTGGGCATCC...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCTTTGGGAAGCATGTTaGACAGGGCTGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETLWEAC*TGLSGP
Trigger: AGGACCTGACAGCCCTGTCCAACATGCTTCCCAAAG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCATCTTGGGCGTGGTGTaGAACTCAGTGACATTCCAG +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLILGVV*NSVTFQ
Trigger: CTGGAATGTCACTGAGTTCCACACCACGCCCAAGAT...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGGATCAAGACACCATTaGATGCCTGCTTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRGSRHH*MPASPR
Trigger: ACGTGGAGAAGCAGGCATCCAATGGTGTCTTGATCC...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTCTGGCAGGCCAATCTaGTCTGATTTTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETSGRPI*SDFGSG
Trigger: CCCACTCCCAAAATCAGACCAGATTGGCCTGCCAGA...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTTCTGGCAGGCCAATCTaGTCTGATTTTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCSGRPI*SDFGSG
Trigger: CCCACTCCCAAAATCAGACCAGATTGGCCTGCCAGA...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCTTTCAAGTTCCAGGTaGGCTCCGCATAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCLSSSR*APHSQH
Trigger: GTGCTGACTATGCGGAGCCCACCTGGAACTTGAAAG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAACAGGTTCAGGTAGATaGTGTTCTGGTAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRTGSGR*CSGRQR
Trigger: CCTTTGCCTACCAGAACACCATCTACCTGAACCTGT...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGATCAGGTAGTTCTTCATaGGGCCATAGACCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGSGSSS*GHRPRS
Trigger: GCTCCGAGGTCTATGGCCCCATGAAGAACTACCTGA...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGGTCCATCAGGTTTTCTaGGATCTCCCTCCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGVHQVF*DLPPVV
Trigger: AACAACTGGAGGGAGATCCCAGAAAACCTGATGGAC...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTTAACCTCGCTGTACTaGTCCATCAGGTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLILTSLY*SIRFSG
Trigger: CCCAGAAAACCTGATGGACCAGTACAGCGAGGTTAA...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAGGATCGGGTTATTATTaGGGTTCTCCATCCACTGCT +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSGSGYY*GSPSTA
Trigger: AGCAGTGGATGGAGAACCCCAATAATAACCCGATCC...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGATTCTTCCAGTTGCTCTaGACAAAGTCCCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRFFQLL*TKSQTR
Trigger: TCTGGTCTGGGACTTTGTCCAGAGCAACTGGAAGAA...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CCGCAATGGCACTGGGCCGGGCCCAGATCCGGATCTGAAATCACTCAGAGGTGGGTGGGATTCCAACCCTaGCCTAACAATTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: PQWHWAGPRSGSEITQRWVGFQP*PNNSET
Trigger: AGTTTCTGAATTGTTAGGCCAGGGTTGGAATCCCAC...CCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
3UTR CAA 72 bp GCCAGGTTGAAGGCGTCATTAATGATCTGTGCCCGATaGATGACAGGGATGGCCGAGTGGTCTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ARLKASLMICAR*MTGMAEWSLCS
Trigger: GCTGCAGAGAGACCACTCGGCCATCCCTGTCATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR TCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTTGGTGTGGAACTCAGTaGCATTCCAGTTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCWCGTQ*HSSWGL
Trigger: AAGACCCCAACTGGAATGTCACTGAGTTCCACACCA...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTGGTGTGGAACTCAGTaGCATTCCAGTTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETWCGTQ*HSSWGL
Trigger: AAGACCCCAACTGGAATGTCACTGAGTTCCACACCA...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTGACCCACTCATTGCCTaGTGTGCTGAAGAGATCGTT +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCDPLIA*CAEEIV
Trigger: AACGATCTCTTCAGCACATCAGGCAATGAGTGGGTC...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTCTCCATCCACTGCTTaGAAAGGCCAGAGACCATCT +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETSPSTA*KGQRPS
Trigger: AGATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGA...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCATTTGCTGTTTTCTGTaGACCACTGGAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLICCFL*TTGAPP
Trigger: AGGTGGTGCTCCAGTGGTTCACAGAAAACAGCAAAT...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGACAAGACACCATTGGATaGCTGCTTCTCCACGTAGTC +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGQDTIG*LLLHVV
Trigger: GACTACGTGGAGAAGCAGGCATCCAATGGTGTCTTG...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCAAGACACCATTGGATaGCTGCTTCTCCACGTAGTC +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETQDTIG*LLLHVV
Trigger: GACTACGTGGAGAAGCAGGCATCCAATGGTGTCTTG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp TCATTAATGATCTGTGCCCGATTGATGACAGGGATGGCCGAGTGGTCTCTCTGCGGCCAGTGCATCCACTaGCATCACGCGGTACACATC +
Preference number: 4 (lower is better)
Translates to: SLMICARLMTGMAEWSLCGQCIH*HHAVHI
Trigger: GATGTGTACCGCGTGATGGCAGTGGATGCACTGGCC...GCAGAGAGACCACTCGGCCATCCCTGTCATCAATCGGGCACAGATCATTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR GCA 90 bp GCAGCTGAGTCTGAATCTTCCTCCAGTTCTCTTCGTCGTAGTTCACCCGGTAATACCGGGAAGCCCATCTaGAGGGTCCAGCGGTTCATG +
Preference number: 4 (lower is better)
Translates to: AAESESSSSSLRRSSPGNTGKPI*RVQRFM
Trigger: CATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGT...ATTACCGGGTGAACTACGACGAAGAGAACTGGAGGAAGATTCAGACTCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR GCA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCGTCATTAATGATCTGTaGCCGATTGATGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAVINDL*PIDDRD
Trigger: ATCCCTGTCATCAATCGGGCACAGATCATTAATGAC...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTGAATCGTCGTGTCACTaGCTGGATGAGGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETESSCH*LDEVGE
Trigger: TTCTCCAACCTCATCCAGGCAGTGACACGACGATTC...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATTCTTGTTCTTCTCCTaGGAGTACACCACTGACAGT +
Preference number: 4 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSFLFFS*EYTTDS
Trigger: ACTGTCAGTGGTGTACTCCCAGGAGAAGAACAAGAA...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTTCTTGTTCTTCTCCTaGGAGTACACCACTGACAGT +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAFLFFS*EYTTDS
Trigger: ACTGTCAGTGGTGTACTCCCAGGAGAAGAACAAGAA...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTATCTTGGGCGTGGTGTaGAACTCAGTGACATTCCAG +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCILGVV*NSVTFQ
Trigger: CTGGAATGTCACTGAGTTCCACACCACGCCCAAGAT...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTGGATCAAGACACCATTaGATGCCTGCTTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCGSRHH*MPASPR
Trigger: ACGTGGAGAAGCAGGCATCCAATGGTGTCTTGATCC...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GCCAGGTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGACAGGGATGGCCTGGTGGGGAGTTGGATaGACCGGTTGTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: ARLKASLMICARLMTGMAWWGVG*TGCSQP
Trigger: AGGCTGTGAACAACCGGTCCATCCAACTCCCCACCA...GGCCATCCCTGTCATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCTGAAGAGATCGTTCTaGGCTCTTACATCTATCAGC +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRALKRSF*ALTSIS
Trigger: GCTGATAGATGTAAGAGCCCAGAACGATCTCTTCAG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCTTAACCTCGCTGTACTaGTCCATCAGGTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLLTSLY*SIRFSG
Trigger: CCCAGAAAACCTGATGGACCAGTACAGCGAGGTTAA...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGGGATCGGGTTATTATTaGGGTTCTCCATCCACTGCT +
Preference number: 4 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSGSGYY*GSPSTA
Trigger: AGCAGTGGATGGAGAACCCCAATAATAACCCGATCC...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGATTTTCTGTGAACCACTaGAGCACCACCTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRFSVNH*STTSLF
Trigger: GAACAAGGAGGTGGTGCTCCAGTGGTTCACAGAAAA...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCTTTTCTGTGAACCACTaGAGCACCACCTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QRERGLETLSLRGGHWCLFSVNH*STTSLF
Trigger: GAACAAGGAGGTGGTGCTCCAGTGGTTCACAGAAAA...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGACATCAGGAACTAGACTaGCTCACAGGCAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGHQELD*LTGREN
Trigger: GTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATG...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCATCAGGAACTAGACTaGCTCACAGGCAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETHQELD*LTGREN
Trigger: GTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AATGGCACTGGGCCGGGCCCAGATCCGGATCTGAAATCACTCAGAGGTGGGATTGAAATCACTCAGAGGTaGGATTCCAACCCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: NGTGPGPDPDLKSLRGGIEITQR*DSNPGL
Trigger: TAGGCCAGGGTTGGAATCCCACCTCTGAGTGATTTC...AATCCCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR TCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCATCATTCAGCACCATaGGGTCTTTCAAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETHHSAP*GLSSSR
Trigger: CCTGGAACTTGAAAGACCTCATGGTGCTGAATGATG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCATCATTCAGCACCATaGGGTCTTTCAAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCHHSAP*GLSSSR
Trigger: CCTGGAACTTGAAAGACCTCATGGTGCTGAATGATG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTGTCATTAATGATCTGTaGCCGATTGATGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAVINDL*PIDDRD
Trigger: ATCCCTGTCATCAATCGGGCACAGATCATTAATGAC...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGTCATTAATGATCTGTaGCCGATTGATGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRVINDL*PIDDRD
Trigger: ATCCCTGTCATCAATCGGGCACAGATCATTAATGAC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAAAAGCTTCTTCCAGTTaGTCTGGACAAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRKASSS*SGQSPR
Trigger: TCTGGGACTTTGTCCAGAGCAACTGGAAGAAGCTTT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGAAAGCTTCTTCCAGTTaGTCTGGACAAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGKASSS*SGQSPR
Trigger: TCTGGGACTTTGTCCAGAGCAACTGGAAGAAGCTTT...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTAAAAATATACAGATCTaGTGCCCTGTTGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPKNIQI*CPVDSS
Trigger: TGAGGAATCAACAGGGCAGCAGATCTGTATATTTTT...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACTGAAGAGATCGTTCTaGGCTCTTACATCTATCAGC +
Preference number: 4 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRLKRSF*ALTSIS
Trigger: GCTGATAGATGTAAGAGCCCAGAACGATCTCTTCAG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp CAGGAAGAGGGTGTTGTTCAGCGCCAGAGTGACAGGGACCTTATGGGCACTGGCCTGAAGAGATCGTTCTaGGCTCTTACATCTATCAGC +
Preference number: 4 (lower is better)
Translates to: QEEGVVQRQSDRDLMGTGLKRSF*ALTSIS
Trigger: GCTGATAGATGTAAGAGCCCAGAACGATCTCTTCAG...GCCAGTGCCCATAAGGTCCCTGTCACTCTGGCGCTGAACAACACCCTCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTGGATCGGGTTATTATTaGGGTTCTCCATCCACTGCT +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETGSGYY*GSPSTA
Trigger: AGCAGTGGATGGAGAACCCCAATAATAACCCGATCC...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTTTCTGTGAACCACTaGAGCACCACCTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETFSVNH*STTSLF
Trigger: GAACAAGGAGGTGGTGCTCCAGTGGTTCACAGAAAA...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp AATGGCACTGGGCCGGGCCCAGATCCGGATCTGAAATCACTCAGAGGTGGGATTATACCAAGACACCATTaGATGCCTGCTTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: NGTGPGPDPDLKSLRGGIIPRHH*MPASPR
Trigger: ACGTGGAGAAGCAGGCATCCAATGGTGTCTTGGTAT...AATCCCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR GCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTAAAGCTTCTTCCAGTTaGTCTGGACAAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETKASSS*SGQSPR
Trigger: TCTGGGACTTTGTCCAGAGCAACTGGAAGAAGCTTT...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTAATATACAGATCTGCTaGCCTGTTGATTCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRANIQIC*PVDSSD
Trigger: ATCTGAGGAATCAACAGGGCAGCAGATCTGTATATT...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCAATATACAGATCTGCTaGCCTGTTGATTCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: TGRPPARPFIVHRELLLINIQIC*PVDSSD
Trigger: ATCTGAGGAATCAACAGGGCAGCAGATCTGTATATT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp GAGTGGGTAGGGTGTGTCATAATGACCAGCAAAGAAGTTAAGGATGGGGCCCGTAGTACGTGGACATCTTaGGCGTGGTGTGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: EWVGCVIMTSKEVKDGARSTWTS*AWCGTQ
Trigger: CTGAGTTCCACACCACGCCCAAGATGTCCACGTACT...ACGGGCCCCATCCTTAACTTCTTTGCTGGTCATTATGACACACCCTACCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCTGAAGAGATCGTTCTaGGCTCTTACATCTATCAGC +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETLKRSF*ALTSIS
Trigger: GCTGATAGATGTAAGAGCCCAGAACGATCTCTTCAG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp GCCAGGTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGACAGGGATGGCCCATCATTCAGCACCATaGGGTCTTTCAAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ARLKASLMICARLMTGMAHHSAP*GLSSSR
Trigger: CCTGGAACTTGAAAGACCTCATGGTGCTGAATGATG...GGCCATCCCTGTCATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR GCA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTGTCATTAATGATCTGTaGCCGATTGATGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: GSSGTRLAHRQRERGLETVINDL*PIDDRD
Trigger: ATCCCTGTCATCAATCGGGCACAGATCATTAATGAC...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGAATATACAGATCTGCTaGCCTGTTGATTCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGNIQIC*PVDSSD
Trigger: ATCTGAGGAATCAACAGGGCAGCAGATCTGTATATT...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR GCA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGAAAAATATACAGATCTaGTGCCCTGTTGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: RERGLETLSLRGGHWCLGKNIQI*CPVDSS
Trigger: TGAGGAATCAACAGGGCAGCAGATCTGTATATTTTT...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR TCA 90 bp TTCCAACCCTGGCCTAACAATTCAGAAACTGGCACAGGGATGAAGAGAACGGGATGGTGTGGAACTCAGTaGCATTCCAGTTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: FQPWPNNSETGTGMKRTGWCGTQ*HSSWGL
Trigger: AAGACCCCAACTGGAATGTCACTGAGTTCCACACCA...TCCCGTTCTCTTCATCCCTGTGCCAGTTTCTGAATTGTTAGGCCAGGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR TCA 90 bp TTATGGGCACTGGCCAGGTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGCACGTAGTTGAATTCTaGGGGGCGGGTAACATTGGA +
Preference number: 4 (lower is better)
Translates to: LWALARLKASLMICARLMHVVEF*GAGNIG
Trigger: TCCAATGTTACCCGCCCCTCAGAATTCAACTACGTG...CATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGCCAGTGCCCATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR GCA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAAAAAATATACAGATCTaGTGCCCTGTTGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: RLAHRQRERGLETLSLRGKNIQI*CPVDSS
Trigger: TGAGGAATCAACAGGGCAGCAGATCTGTATATTTTT...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CCA 90 bp TTATGGGCACTGGCCAGGTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGACAGGTTCAGGTAGATaGTGTTCTGGTAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LWALARLKASLMICARLMTGSGR*CSGRQR
Trigger: CCTTTGCCTACCAGAACACCATCTACCTGAACCTGT...CATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGCCAGTGCCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR GCA 90 bp TCTGGTCTGATTTTGGGAGTGGGTAGGGTGTGTCATAATGACCAGCAAAGAAGTCAAGACACCATTGGATaGCTGCTTCTCCACGTAGTC +
Preference number: 4 (lower is better)
Translates to: SGLILGVGRVCHNDQQRSQDTIG*LLLHVV
Trigger: GACTACGTGGAGAAGCAGGCATCCAATGGTGTCTTG...ACTTCTTTGCTGGTCATTATGACACACCCTACCCACTCCCAAAATCAGACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR GCA 90 bp GTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGACAGGGATGGCCGAGTGGTCATTAATGATCTGTaGCCGATTGATGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: VEGVINDLCPIDDRDGRVVINDL*PIDDRD
Trigger: ATCCCTGTCATCAATCGGGCACAGATCATTAATGAC...CACTCGGCCATCCCTGTCATCAATCGGGCACAGATCATTAATGACGCCTTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS CCA 90 bp GCTTTAGACCGAGGAGCGAGATCTGGGCCGCCGGGCGCTGGAACCTaGACCCTGGACCCTGGCGGGTTCCGAGCTGCGCCGCCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: ALDRGARSGPPGAGT*TLDPGGFRAAPPPS
Trigger: GGACGGCGGCGGCGCAGCTCGGAACCCGCCAGGGTCCAGGGTCCAGGTTCCAGCGCCCGGCGGCCCAGATCTCGCTCCTCGGTCTAAAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679248.1
CDS CCA 90 bp GGCGGAGGCTTTAGACCGAGGAGCGAGATCTGGGCCGCCGGGCGCTaGAACCTGGACCCTGGACCCTGGCGGGTTCCGAGCTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: GGGFRPRSEIWAAGR*NLDPGPWRVPSCAA
Trigger: GGCGGCGCAGCTCGGAACCCGCCAGGGTCCAGGGTCCAGGTTCCAGCGCCCGGCGGCCCAGATCTCGCTCCTCGGTCTAAAGCCTCCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679248.1
CDS CCA 90 bp AGGTGGCATTGCATTGATCTGCTTGAGAGCTGGGCCGCCGGGCGCTaGAACCTGGACCCTGGACCCTGGCGGGTTCCGAGCTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: RWHCIDLLESWAAGR*NLDPGPWRVPSCAA
Trigger: GGCGGCGCAGCTCGGAACCCGCCAGGGTCCAGGGTCCAGGTTCCAGCGCCCGGCGGCCCAGCTCTCAAGCAGATCAATGCAATGCCACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS CCA 90 bp TCCAACAGGCGAAGGTCACTGGACTGGGCAGGGGCACGCTCCGCCTaGGGAGAGGAGATCCAGGAACGGTGTGTGGAGCTGGGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SNRRRSLDWAGARSA*GEEIQERCVELGSG
Trigger: CCCCGAGCCCAGCTCCACACACCGTTCCTGGATCTCCTCTCCCCAGGCGGAGCGTGCCCCTGCCCAGTCCAGTGACCTTCGCCTGTTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCGACGCCAGGCCCTGCTaGAATACGTCCTCGGACAGG +
Preference number: 5 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRDARPC*NTSSDR
Trigger: CCTGTCCGAGGACGTATTCAAGCAGGGCCTGGCGTC...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGACACATGTGGGCACCTaGCATGGGGGCCGGGTGACT +
Preference number: 5 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPTHVGT*HGGRVT
Trigger: AGTCACCCGGCCCCCATGCAAGGTGCCCACATGTGT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp TGGGGCCCGTCACGTTCAGGGCATAATCGCCGTGGCCCGCCGCAATaGCACTGGGCCGGGCCCAGATCCGGATCTGCAAGGTGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: WGPSRSGHNRRGPPQ*HWAGPRSGSARCEE
Trigger: TTCCTCACACCTTGCAGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGAACGTGACGGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559887.1
CDS-3UTR CAA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGTACAGGCCCCTGTCATaGGGGGTGAGGTACGGTCTC +
Preference number: 5 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPYRPLS*GVRYGL
Trigger: GAGACCGTACCTCACCCCCAATGACAGGGGCCTGTA...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGGGGTGCTGGGACCTTaGGGAAGCATGTTGGACAGG +
Preference number: 5 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRGVLGP*GSMLDR
Trigger: CCTGTCCAACATGCTTCCCAAAGGTCCCAGCACCCC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGAGGATCCACAACTCTTaGCTGCAGGCCAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPRIHNS*LQARAA
Trigger: GGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGATCCT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCATTGCATTGATCTGCTaGAGAGCTGGGCCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRIALIC*RAGPPG
Trigger: GCCCGGCGGCCCAGCTCTCAAGCAGATCAATGCAAT...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS GCA 90 bp AGGCCCAGTGGGCAAAGCAAGCGGCCAGGTGGCATTGCATTGATCTaGTTGAGAGCTGGGCCGCCGGGCGCTGGAACCTGGACCCTGGAC +
Preference number: 5 (lower is better)
Translates to: RPSGQSKRPGGIALI*LRAGPPGAGTWTLD
Trigger: GTCCAGGGTCCAGGTTCCAGCGCCCGGCGGCCCAGCTCTCAAGCAGATCAATGCAATGCCACCTGGCCGCTTGCTTTGCCCACTGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS GCA 90 bp GCGGGCGTTGAGCACCTAGAGTTCCCCTTCCTCTTCACTGAGAGCTaGGGCGGAGGCTTTAGACCGAGGAGCGAGATCTGGGCCGCCGGG +
Preference number: 5 (lower is better)
Translates to: AGVEHLEFPFLFTES*GGGFRPRSEIWAAG
Trigger: CCCGGCGGCCCAGATCTCGCTCCTCGGTCTAAAGCCTCCGCCGCAGCTCTCAGTGAAGAGGAAGGGGAACTCTAGGTGCTCAACGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679248.1
CDS CCA 90 bp TGGGGCCCGTCACGTTCAGGGCATAATCGCCGTGGCCCGCCGCAATaGCACTGGGCCGGGCCCAGATCCGGATCAAGACACCATTGGATG +
Preference number: 5 (lower is better)
Translates to: WGPSRSGHNRRGPPQ*HWAGPRSGSRHHWM
Trigger: CATCCAATGGTGTCTTGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGAACGTGACGGGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGAGGGCTGTCAGGTCCTaGGGGTGGATAAGCGTGATG +
Preference number: 5 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPRAVRS*GWISVM
Trigger: CATCACGCTTATCCACCCCAAGGACCTGACAGCCCT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCCCTTTGGGAAGCATGTaGGACAGGGCTGTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRPLGSM*DRAVRS
Trigger: GGACCTGACAGCCCTGTCCAACATGCTTCCCAAAGG...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTATCTGGGCCGGCGTGTaGATCTCCGAGGCGGGTGTG +
Preference number: 5 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPIWAGV*ISEAGV
Trigger: CACACCCGCCTCGGAGATCAACACGCCGGCCCAGAT...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGAGTTGGATGGACCGGTaGTTCACAGCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRSWMDR*FTASCR
Trigger: CCTGCAGGAGGCTGTGAACAACCGGTCCATCCAACT...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp ATCTGGGCCGGCGTGTTGATCTCCGAGGCGGGTGTGGACAGCGGGTaGGAGGAGGCCAGTGCATCCACTGCCATCACGCGGTACACATCA +
Preference number: 5 (lower is better)
Translates to: IWAGVLISEAGVDSG*EEASASTAITRYTS
Trigger: TGATGTGTACCGCGTGATGGCAGTGGATGCACTGGCCTCCTCCCACCCGCTGTCCACACCCGCCTCGGAGATCAACACGCCGGCCCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560030.1
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp CCGTCACGTTCAGGGCATAATCGCCGTGGCCCGCCGCAATGGCACTaGGCCGGGCCCAGATCCGGATCTGCAAGGTGTGAGGAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: PSRSGHNRRGPPQWH*AGPRSGSARCEEEA
Trigger: TGCTTCTTCCTCACACCTTGCAGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGAACGTGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559887.1
CDS-3UTR CAA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCGGATCAAGACACCATaGGATGCCTGCTTCTCCACG +
Preference number: 5 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRRIKTP*DACFST
Trigger: CGTGGAGAAGCAGGCATCCAATGGTGTCTTGATCCG...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTCCATGGCGCCGGCGTaGAAGTCTGGCAGGCCAATC +
Preference number: 5 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPSMAPA*KSGRPI
Trigger: GATTGGCCTGCCAGACTTCAACGCCGGCGCCATGGA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGAGGAGGACAGGGGGTCGAACAGCAGGGAGTTCTCCCGGTAGGTCACCAGTCCTCCATGGCGCCGGCGTaGAAGTCTGGCAGGCCAATC +
Preference number: 5 (lower is better)
Translates to: GGGQGVEQQGVLPVGHQSSMAPA*KSGRPI
Trigger: GATTGGCCTGCCAGACTTCAACGCCGGCGCCATGGA...GGACTGGTGACCTACCGGGAGAACTCCCTGCTGTTCGACCCCCTGTCCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CAA 90 bp GCTGGAGGAGGACAGGGGGTCGAACAGCAGGGAGTTCTCCCGGTAGGTCACCAGACCACCCGCTCCTTGTaGCTGCTGGAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: AGGGQGVEQQGVLPVGHQTTRSL*LLEEDR
Trigger: CCTGTCCTCCTCCAGCAGCAACAAGGAGCGGGTGGT...CTGGTGACCTACCGGGAGAACTCCCTGCTGTTCGACCCCCTGTCCTCCTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CAA 90 bp GCTGCTGGAGGAGGACAGGGGGTCGAACAGCAGGGAGTTCTCCCGGTAGGTCACGTGACCACCCGCTCCTaGTTGCTGCTGGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: AAGGGQGVEQQGVLPVGHVTTRS*LLLEED
Trigger: GTCCTCCTCCAGCAGCAACAAGGAGCGGGTGGTCAC...GTGACCTACCGGGAGAACTCCCTGCTGTTCGACCCCCTGTCCTCCTCCAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CAA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGATGATCTGTGCCCGATaGATGACAGGGATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRMICAR*MTGMAE
Trigger: CTCGGCCATCCCTGTCATCAATCGGGCACAGATCAT...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCGTCCCAGACCAGACCTaGCCCAATGACGTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRVPDQT*PNDVVG
Trigger: ACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGAC...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGTCCCAGACCAGACCTaGCCCAATGACGTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRVPDQT*PNDVVG
Trigger: ACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGAC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTACACATGTGGGCACCTaGCATGGGGGCCGGGTGACT +
Preference number: 5 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPTHVGT*HGGRVT
Trigger: AGTCACCCGGCCCCCATGCAAGGTGCCCACATGTGT...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGCAGCAAGGCCGTTCATaGTCCATCGAGAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRQQGRS*SIESFC
Trigger: GCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTG...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 90 bp GCCCGGAGCTTGTCAGCCTCATTGACCAGTGTGGCATTTCGGAACTaGTCCCAGGCGAAGTCCCACTCCTCCTCCCCGCCCTGGGCGATA +
Preference number: 5 (lower is better)
Translates to: ARSLSASLTSVAFRN*SQAKSHSSSPPWAI
Trigger: TATCGCCCAGGGCGGGGAGGAGGAGTGGGACTTCGCCTGGGAGCAGTTCCGAAATGCCACACTGGTCAATGAGGCTGACAAGCTCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp TGGTGGCTGAGGCGGACGGGGTGGTGGAGGCCACGGGGGAGCTGTTaGCGTTCTTGTTCTTCTCCTGGGAGTACACCACTGACAGTGCGA +
Preference number: 5 (lower is better)
Translates to: WWLRRTGWWRPRGSC*RSCSSPGSTPLTVR
Trigger: TCGCACTGTCAGTGGTGTACTCCCAGGAGAAGAACAAGAACGCCAACAGCTCCCCCGTGGCCTCCACCACCCCGTCCGCCTCAGCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGGAGCTGTTGGCGTTCTaGTTCTTCTCCTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRELLAF*FFSWEY
Trigger: GTACTCCCAGGAGAAGAACAAGAACGCCAACAGCTC...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCACCACCTTTCTGACATaGCCCTCCATGTACTCGCTG +
Preference number: 5 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRTTFLT*PSMYSL
Trigger: CAGCGAGTACATGGAGGGCAATGTCAGAAAGGTGGT...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TGGCACAGGGATGAAGAGAACGGGAAGACCCCTCAAGCCGGGGCCAGCCCACGTGGGGTGCTGGGACCTTaGGGAAGCATGTTGGACAGG +
Preference number: 5 (lower is better)
Translates to: WHRDEENGKTPQAGASPRGVLGP*GSMLDR
Trigger: CCTGTCCAACATGCTTCCCAAAGGTCCCAGCACCCC...ACGTGGGCTGGCCCCGGCTTGAGGGGTCTTCCCGTTCTCTTCATCCCTGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CAA 90 bp TCAGGGCATAATCGCCGTGGCCCGCCGCAATGGCACTGGGCCGGGCCCAGATCCTCAGTGACATTCCAGTaGGGGTCTTCTGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: SGHNRRGPPQWHWAGPRSSVTFQ*GSSGSG
Trigger: CCCACTTCCAGAAGACCCCAACTGGAATGTCACTGA...GGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CAA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGAAGTACGTGGACATCTaGGGCGTGGTGTGGAACTCA +
Preference number: 5 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPKYVDI*GVVWNS
Trigger: TGAGTTCCACACCACGCCCAAGATGTCCACGTACTT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCTCCATGGCGCCGGCGTaGAAGTCTGGCAGGCCAATC +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEASMAPA*KSGRPI
Trigger: GATTGGCCTGCCAGACTTCAACGCCGGCGCCATGGA...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCGACGCCAGGCCCTGCTaGAATACGTCCTCGGACAGG +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEADARPC*NTSSDR
Trigger: CCTGTCCGAGGACGTATTCAAGCAGGGCCTGGCGTC...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGAGCAGGACCCACTCATaGCCTGATGTGCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPSRTHS*PDVLKR
Trigger: TCTCTTCAGCACATCAGGCAATGAGTGGGTCCTGCT...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTCACTCTGGAACTCCGTaGGAGCAGGCGGTGCTGATG +
Preference number: 5 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPHSGTP*EQAVLM
Trigger: CATCAGCACCGCCTGCTCCAACGGAGTTCCAGAGTG...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp ACGGGAAGACCCCTCAAGCCGGGGCCAGCCCACGTGAAGGAGAGATaGGCCCAGCCTCATACCAAGACACCATTGGATGCCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TGRPLKPGPAHVKER*AQPHTKTPLDACFS
Trigger: GGAGAAGCAGGCATCCAATGGTGTCTTGGTATGAGGCTGGGCCCATCTCTCCTTCACGTGGGCTGGCCCCGGCTTGAGGGGTCTTCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS CCA 90 bp GCAGCTGTCAGGGAAATGATGTCAGCGGAAATGATGGGGGCAGGATaGAGAGGAGGTGGACTCCAACCCTGGGGGAGGGAGAGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: AAVREMMSAEMMGAG*RGGGLQPWGRERSG
Trigger: GCCGCTCCTCTCCCTCCCCCAGGGTTGGAGTCCACCTCCTCTCCATCCTGCCCCCATCATTTCCGCTGACATCATTTCCCTGACAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558177.5
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCACGTCAGTGGCCTCCTaGCAGGTGAAACGGACGGTG +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEATSVAS*QVKRTV
Trigger: CACCGTCCGTTTCACCTGCAAGGAGGCCACTGACGT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTCCTTTGGGAAGCATGTaGGACAGGGCTGTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPPLGSM*DRAVRS
Trigger: GGACCTGACAGCCCTGTCCAACATGCTTCCCAAAGG...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TCAGGGCATAATCGCCGTGGCCCGCCGCAATGGCACTGGGCCGGGCCCAGATCCCAATCTGGTCTGATTTaGGGAGTGGGTAGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: SGHNRRGPPQWHWAGPRSQSGLI*GVGRVC
Trigger: ACACACCCTACCCACTCCCAAAATCAGACCAGATTG...GGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CAA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGCAATCTGGTCTGATTTaGGGAGTGGGTAGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPQSGLI*GVGRVC
Trigger: ACACACCCTACCCACTCCCAAAATCAGACCAGATTG...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCACCACCCGCTCCTTGTaGCTGCTGGAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: TGRPPARPFIVHRELLLITTRSL*LLEEDR
Trigger: CCTGTCCTCCTCCAGCAGCAACAAGGAGCGGGTGGT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAACCACCCGCTCCTTGTaGCTGCTGGAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRTTRSL*LLEEDR
Trigger: CCTGTCCTCCTCCAGCAGCAACAAGGAGCGGGTGGT...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAGTGACCACCCGCTCCTaGTTGCTGCTGGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSVTTRS*LLLEED
Trigger: GTCCTCCTCCAGCAGCAACAAGGAGCGGGTGGTCAC...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGTGACCACCCGCTCCTaGTTGCTGCTGGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRVTTRS*LLLEED
Trigger: GTCCTCCTCCAGCAGCAACAAGGAGCGGGTGGTCAC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGATCTGGGCCGGCGTGTaGATCTCCGAGGCGGGTGTG +
Preference number: 5 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGIWAGV*ISEAGV
Trigger: CACACCCGCCTCGGAGATCAACACGCCGGCCCAGAT...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAGACGCCAGGCCCTGCTaGAATACGTCCTCGGACAGG +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSDARPC*NTSSDR
Trigger: CCTGTCCGAGGACGTATTCAAGCAGGGCCTGGCGTC...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCACTCTGGAACTCCGTaGGAGCAGGCGGTGCTGATG +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAHSGTP*EQAVLM
Trigger: CATCAGCACCGCCTGCTCCAACGGAGTTCCAGAGTG...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGTTCTCCATCCACTGCTaGAAAAGGCCAGAGACCATC +
Preference number: 5 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRFSIHC*KRPETI
Trigger: GATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAA...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGATCGGGTTATTATaGGGGTTCTCCATCCACTGC +
Preference number: 5 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRWIGLL*GFSIHC
Trigger: GCAGTGGATGGAGAACCCCAATAATAACCCGATCCA...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTACGGTGGACCGCAGGTaGGGGTGGATCGGGTTATTA +
Preference number: 5 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPTVDRR*GWIGLL
Trigger: TAATAACCCGATCCACCCCAACCTGCGGTCCACCGT...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCTGCACCAGCCGCAAGCCTGTTTCCTCGTaGTCCTTCTTGAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RGGHWCLGLQEWRPCTSRKPVSS*SFLNCS
Trigger: GGAGCAGTTCAAGAAGGACAACGAGGAAACAGGCTT...GCGGCTGGTGCAGGGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGGAGGGCTGGGGACTATTaGCTGTTTTCTGTGAACCAC +
Preference number: 5 (lower is better)
Translates to: ALHQPLGWTHVGTLHGGRRAGDY*LFSVNH
Trigger: GTGGTTCACAGAAAACAGCAAATAGTCCCCAGCCCT...CCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCACACATGTGGGCACCTaGCATGGGGGCCGGGTGACT +
Preference number: 5 (lower is better)
Translates to: TGRPPARPFIVHRELLLITHVGT*HGGRVT
Trigger: AGTCACCCGGCCCCCATGCAAGGTGCCCACATGTGT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 90 bp GTTGATCTCCGAGGCGGGTGTGGACAGCGGGTGGGAGGAGGCCAGTaGATCCACTGCCATCACGCGGTACACATCATTCAGCACCATGAG +
Preference number: 5 (lower is better)
Translates to: VDLRGGCGQRVGGGQ*IHCHHAVHIIQHHE
Trigger: CTCATGGTGCTGAATGATGTGTACCGCGTGATGGCAGTGGATGCACTGGCCTCCTCCCACCCGCTGTCCACACCCGCCTCGGAGATCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560030.1
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGGCCACGGGGGAGCTGTaGGCGTTCTTGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RERGLETLSLRGGHWCLGATGEL*AFLFFS
Trigger: GGAGAAGAACAAGAACGCCAACAGCTCCCCCGTGGC...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATACAGGCCCCTGTCATaGGGGGTGAGGTACGGTCTC +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSYRPLS*GVRYGL
Trigger: GAGACCGTACCTCACCCCCAATGACAGGGGCCTGTA...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGGGGTGCTGGGACCTTaGGGAAGCATGTTGGACAGG +
Preference number: 5 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRGVLGP*GSMLDR
Trigger: CCTGTCCAACATGCTTCCCAAAGGTCCCAGCACCCC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCGGGGTGCTGGGACCTTaGGGAAGCATGTTGGACAGG +
Preference number: 5 (lower is better)
Translates to: TGRPPARPFIVHRELLLIGVLGP*GSMLDR
Trigger: CCTGTCCAACATGCTTCCCAAAGGTCCCAGCACCCC...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCACCACCCGCTCCTTGTaGCTGCTGGAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: QRERGLETLSLRGGHWCLTTRSL*LLEEDR
Trigger: CCTGTCCTCCTCCAGCAGCAACAAGGAGCGGGTGGT...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGGTGACCACCCGCTCCTaGTTGCTGCTGGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSVTTRS*LLLEED
Trigger: GTCCTCCTCCAGCAGCAACAAGGAGCGGGTGGTCAC...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGTGACCACCCGCTCCTaGTTGCTGCTGGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRVTTRS*LLLEED
Trigger: GTCCTCCTCCAGCAGCAACAAGGAGCGGGTGGTCAC...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAATCTGGGCCGGCGTGTaGATCTCCGAGGCGGGTGTG +
Preference number: 5 (lower is better)
Translates to: RLAHRQRERGLETLSLRGIWAGV*ISEAGV
Trigger: CACACCCGCCTCGGAGATCAACACGCCGGCCCAGAT...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCAGTTGGATGGACCGGTaGTTCACAGCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEASWMDR*FTASCR
Trigger: CCTGCAGGAGGCTGTGAACAACCGGTCCATCCAACT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CACCGTGATGACCGGGAAGCCCATCTGCAGGGTCCAGCGGTTCATGATGTCCCGAGTTGGATGGACCGGTaGTTCACAGCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: HRDDREAHLQGPAVHDVPSWMDR*FTASCR
Trigger: CCTGCAGGAGGCTGTGAACAACCGGTCCATCCAACT...CGGGACATCATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGTCATCACGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CAA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCACGGTGGTGGGGAGTaGGATGGACCGGTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAHGGGE*DGPVVH
Trigger: GTGAACAACCGGTCCATCCAACTCCCCACCACCGTG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGAGGGGCGGGTAACATaGGAATCGGGGTCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: GERGYRAAPSKAVHCPSREGRVT*ESGSRR
Trigger: CCTCCTTGACCCCGATTCCAATGTTACCCGCCCCTC...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGGAGGGGCGGGTAACATaGGAATCGGGGTCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: RERGLETLSLRGGHWCLGEGRVT*ESGSRR
Trigger: CCTCCTTGACCCCGATTCCAATGTTACCCGCCCCTC...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TCCACCGTGATGACCGGGAAGCCCATCTGCAGGGTCCAGCGGTTCATGATGTCCGAGGGGCGGGTAACATaGGAATCGGGGTCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: STVMTGKPICRVQRFMMSEGRVT*ESGSRR
Trigger: CCTCCTTGACCCCGATTCCAATGTTACCCGCCCCTC...GGACATCATGAACCGCTGGACCCTGCAGATGGGCTTCCCGGTCATCACGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAGAGGGGCGGGTAACATaGGAATCGGGGTCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSEGRVT*ESGSRR
Trigger: CCTCCTTGACCCCGATTCCAATGTTACCCGCCCCTC...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGGTCCAGCGGTTCATGATGTCCCGCACGGTGGTGGGGAGTTGGATGGACCGGATGATCTGTGCCCGATaGATGACAGGGATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: RVQRFMMSRTVVGSWMDRMICAR*MTGMAE
Trigger: CTCGGCCATCCCTGTCATCAATCGGGCACAGATCAT...CCGGTCCATCCAACTCCCCACCACCGTGCGGGACATCATGAACCGCTGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCACACTCTGGAACTCCGTaGGAGCAGGCGGTGCTGATG +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSHSGTP*EQAVLM
Trigger: CATCAGCACCGCCTGCTCCAACGGAGTTCCAGAGTG...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCACGGTGGACCGCAGGTaGGGGTGGATCGGGTTATTA +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEATVDRR*GWIGLL
Trigger: TAATAACCCGATCCACCCCAACCTGCGGTCCACCGT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAAGGGCTGCCCGGAGCTaGTCAGCCTCATTGACCAGT +
Preference number: 5 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRRAARS*SASLTS
Trigger: ACTGGTCAATGAGGCTGACAAGCTCCGGGCAGCCCT...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAAGGATCCACAACTCTTaGCTGCAGGCCAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSRIHNS*LQARAA
Trigger: GGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGATCCT...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATGGGGGCCGTTCTCCTTCACCCACTaGATGTTGGCTTTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: GPAPAAGMDTCGHLAWGPFSFTH*MLAFVF
Trigger: GAAGACGAAAGCCAACATCAAGTGGGTGAAGGAGAA...CGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACACATGTGGGCACCTaGCATGGGGGCCGGGTGACT +
Preference number: 5 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSTHVGT*HGGRVT
Trigger: AGTCACCCGGCCCCCATGCAAGGTGCCCACATGTGT...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCACGTGGGCTGGAGACTTaGTCCTTGAGGGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSRGLET*SLRGGH
Trigger: GTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACG...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS TCA 90 bp ACTCGCTGTCCATCTCATACTGGCTGTCCTTCACCAGGGAGCCCTTaGGGTGCACCACCAGGTACTCGGTGGGCTCCACCAGCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: TRCPSHTGCPSPGSP*GAPPGTRWAPPAQS
Trigger: AGACTGAGCTGGTGGAGCCCACCGAGTACCTGGTGGTGCACCTCAAGGGCTCCCTGGTGAAGGACAGCCAGTATGAGATGGACAGCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 90 bp CGAGGCGGGTGTGGACAGCGGGTGGGAGGAGGCCAGTGCATCCACTaGCATCACGCGGTACACATCATTCAGCACCATGAGGTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: RGGCGQRVGGGQCIH*HHAVHIIQHHEVFQ
Trigger: TTGAAAGACCTCATGGTGCTGAATGATGTGTACCGCGTGATGGCAGTGGATGCACTGGCCTCCTCCCACCCGCTGTCCACACCCGCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560030.1
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp GTGGTGGAGGCCACGGGGGAGCTGTTGGCGTTCTTGTTCTTCTCCTaGGAGTACACCACTGACAGTGCGATGATTGTGCACACGGCTGCC +
Preference number: 5 (lower is better)
Translates to: VVEATGELLAFLFFS*EYTTDSAMIVHTAA
Trigger: GGCAGCCGTGTGCACAATCATCGCACTGTCAGTGGTGTACTCCCAGGAGAAGAACAAGAACGCCAACAGCTCCCCCGTGGCCTCCACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGGCCACGGGGGAGCTGTaGGCGTTCTTGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGATGEL*AFLFFS
Trigger: GGAGAAGAACAAGAACGCCAACAGCTCCCCCGTGGC...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGTACAGGCCCCTGTCATaGGGGGTGAGGTACGGTCTC +
Preference number: 5 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSYRPLS*GVRYGL
Trigger: GAGACCGTACCTCACCCCCAATGACAGGGGCCTGTA...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTGGATAAGCGTGATGTaGAACTCGGCCTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPWISVM*NSAFMA
Trigger: GGCCATGAAGGCCGAGTTCAACATCACGCTTATCCA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAAGGGCTGTCAGGTCCTaGGGGTGGATAAGCGTGATG +
Preference number: 5 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRRAVRS*GWISVM
Trigger: CATCACGCTTATCCACCCCAAGGACCTGACAGCCCT...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCAGGGCTGTCAGGTCCTaGGGGTGGATAAGCGTGATG +
Preference number: 5 (lower is better)
Translates to: TGRPPARPFIVHRELLLIRAVRS*GWISVM
Trigger: CATCACGCTTATCCACCCCAAGGACCTGACAGCCCT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTAGGGCTGTCAGGTCCTaGGGGTGGATAAGCGTGATG +
Preference number: 5 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRARAVRS*GWISVM
Trigger: CATCACGCTTATCCACCCCAAGGACCTGACAGCCCT...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GCCGGGCCCAGATCCGGATCTGAAATCACTCAGAGGTGGGATTCCAACCCTGGCCCTTTGGGAAGCATGTaGGACAGGGCTGTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: AGPRSGSEITQRWDSNPGPLGSM*DRAVRS
Trigger: GGACCTGACAGCCCTGTCCAACATGCTTCCCAAAGG...GCCAGGGTTGGAATCCCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGGGGGTGCTGGGACCTTaGGGAAGCATGTTGGACAGG +
Preference number: 5 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSGVLGP*GSMLDR
Trigger: CCTGTCCAACATGCTTCCCAAAGGTCCCAGCACCCC...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCGGATCAAGACACCATaGGATGCCTGCTTCTCCACG +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEARIKTP*DACFST
Trigger: CGTGGAGAAGCAGGCATCCAATGGTGTCTTGATCCG...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTTCCATGGCGCCGGCGTaGAAGTCTGGCAGGCCAATC +
Preference number: 5 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCSMAPA*KSGRPI
Trigger: GATTGGCCTGCCAGACTTCAACGCCGGCGCCATGGA...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAACCACCCGCTCCTTGTaGCTGCTGGAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: RLAHRQRERGLETLSLRGTTRSL*LLEEDR
Trigger: CCTGTCCTCCTCCAGCAGCAACAAGGAGCGGGTGGT...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCAGTTGGATGGACCGGTaGTTCACAGCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TGRPPARPFIVHRELLLISWMDR*FTASCR
Trigger: CCTGCAGGAGGCTGTGAACAACCGGTCCATCCAACT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCACGGTGGTGGGGAGTaGGATGGACCGGTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSHGGGE*DGPVVH
Trigger: GTGAACAACCGGTCCATCCAACTCCCCACCACCGTG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCACGGTGGTGGGGAGTaGGATGGACCGGTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: QRERGLETLSLRGGHWCLHGGGE*DGPVVH
Trigger: GTGAACAACCGGTCCATCCAACTCCCCACCACCGTG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGGAGGGGCGGGTAACATaGGAATCGGGGTCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGEGRVT*ESGSRR
Trigger: CCTCCTTGACCCCGATTCCAATGTTACCCGCCCCTC...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTATCAGGAAGAGGGTGTaGTTCAGCGCCAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPIRKRV*FSARVT
Trigger: TGTCACTCTGGCGCTGAACAACACCCTCTTCCTGAT...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCACTCTGGAACTCCGTaGGAGCAGGCGGTGCTGATG +
Preference number: 5 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSHSGTP*EQAVLM
Trigger: CATCAGCACCGCCTGCTCCAACGGAGTTCCAGAGTG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAAGGATCCACAACTCTTaGCTGCAGGCCAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRRIHNS*LQARAA
Trigger: GGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGATCCT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCACTGCCTGGATGAGGTaGGAGAAGGAGAACGAGCCA +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEATAWMR*EKENEP
Trigger: TGGCTCGTTCTCCTTCTCCAACCTCATCCAGGCAGT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCGTGGGCTGGAGACTTaGTCCTTGAGGGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGRGLET*SLRGGH
Trigger: GTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACG...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCCCAGGTGGCATTGCATaGATCTGCTTGAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAPGGIA*ICLRAG
Trigger: CCCAGCTCTCAAGCAGATCAATGCAATGCCACCTGG...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS TCA 90 bp TGGCGTTCTTGTTCTTCTCCTGGGAGTACACCACTGACAGTGCGATaGTTGTGCACACGGCTGCCACGCCCAGGAGGATCCCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: WRSCSSPGSTPLTVR*LCTRLPRPGGSPGC
Trigger: GCATCCTGGGGATCCTCCTGGGCGTGGCAGCCGTGTGCACAATCATCGCACTGTCAGTGGTGTACTCCCAGGAGAAGAACAAGAACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS TCA 90 bp GGGGGAGCTGTTGGCGTTCTTGTTCTTCTCCTGGGAGTACACCACTaGCAGTGCGATGATTGTGCACACGGCTGCCACGCCCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: GGAVGVLVLLLGVHH*QCDDCAHGCHAQED
Trigger: ATCCTCCTGGGCGTGGCAGCCGTGTGCACAATCATCGCACTGTCAGTGGTGTACTCCCAGGAGAAGAACAAGAACGCCAACAGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 90 bp CTGTCCATCTCATACTGGCTGTCCTTCACCAGGGAGCCCTTGAGGTaGACCACCAGGTACTCGGTGGGCTCCACCAGCTCAGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: LSISYWLSFTREPLR*TTRYSVGSTSSVLS
Trigger: TGACAAGACTGAGCTGGTGGAGCCCACCGAGTACCTGGTGGTGCACCTCAAGGGCTCCCTGGTGAAGGACAGCCAGTATGAGATGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 90 bp ATTGCCCTCCATGTACTCGCTGCGGTAGAAGCCCGCCAGGTCATCTaGCAACTCCCCCTCGAACTCGCTGTCCATCTCATACTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: IALHVLAAVEARQVI*QLPLELAVHLILAV
Trigger: GACAGCCAGTATGAGATGGACAGCGAGTTCGAGGGGGAGTTGGCAGATGACCTGGCGGGCTTCTACCGCAGCGAGTACATGGAGGGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 90 bp GCCGGCTCATCGAAGCATGGGAAGGACTTCCGGGCATCTGCAGCCTaGATCTGTGTAGTGGCCACCACCTTTCTGACATTGCCCTCCATG +
Preference number: 5 (lower is better)
Translates to: AGSSKHGKDFRASAA*ICVVATTFLTLPSM
Trigger: CATGGAGGGCAATGTCAGAAAGGTGGTGGCCACTACACAGATGCAGGCTGCAGATGCCCGGAAGTCCTTCCCATGCTTCGATGAGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 90 bp TTCTCCTTCACCCACTTGATGTTGGCTTTCGTCTTCTCCAGGGCTTaGTCCAGGGCCCGGGTGCCTGAGCCGAAGCCTGTTTCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: FSFTHLMLAFVFSRA*SRARVPEPKPVSSL
Trigger: CAACGAGGAAACAGGCTTCGGCTCAGGCACCCGGGCCCTGGAGCAAGCCCTGGAGAAGACGAAAGCCAACATCAAGTGGGTGAAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp AGGTCATCTGCCAACTCCCCCTCGAACTCGCTGTCCATCTCATACTaGCTGTCCTTCACCAGGGAGCCCTTGAGGTGCACCACCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RSSANSPSNSLSISY*LSFTREPLRCTTRY
Trigger: GTACCTGGTGGTGCACCTCAAGGGCTCCCTGGTGAAGGACAGCCAGTATGAGATGGACAGCGAGTTCGAGGGGGAGTTGGCAGATGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGATACAGGCCCCTGTCATaGGGGGTGAGGTACGGTCTC +
Preference number: 5 (lower is better)
Translates to: RLAHRQRERGLETLSLRGYRPLS*GVRYGL
Trigger: GAGACCGTACCTCACCCCCAATGACAGGGGCCTGTA...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAACGTCAGTGGCCTCCTaGCAGGTGAAACGGACGGTG +
Preference number: 5 (lower is better)
Translates to: RLAHRQRERGLETLSLRGTSVAS*QVKRTV
Trigger: CACCGTCCGTTTCACCTGCAAGGAGGCCACTGACGT...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTACGTCAGTGGCCTCCTaGCAGGTGAAACGGACGGTG +
Preference number: 5 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCTSVAS*QVKRTV
Trigger: CACCGTCCGTTTCACCTGCAAGGAGGCCACTGACGT...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTACGTCAGTGGCCTCCTaGCAGGTGAAACGGACGGTG +
Preference number: 5 (lower is better)
Translates to: GSSGTRLAHRQRERGLETTSVAS*QVKRTV
Trigger: CACCGTCCGTTTCACCTGCAAGGAGGCCACTGACGT...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCACCACCTTTCTGACATaGCCCTCCATGTACTCGCTG +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEATTFLT*PSMYSL
Trigger: CAGCGAGTACATGGAGGGCAATGTCAGAAAGGTGGT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCTGGATAAGCGTGATGTaGAACTCGGCCTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAWISVM*NSAFMA
Trigger: GGCCATGAAGGCCGAGTTCAACATCACGCTTATCCA...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACCTTTGGGAAGCATGTaGGACAGGGCTGTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRPLGSM*DRAVRS
Trigger: GGACCTGACAGCCCTGTCCAACATGCTTCCCAAAGG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCCTTTGGGAAGCATGTaGGACAGGGCTGTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: QRERGLETLSLRGGHWCLPLGSM*DRAVRS
Trigger: GGACCTGACAGCCCTGTCCAACATGCTTCCCAAAGG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCAAGTACGTGGACATCTaGGGCGTGGTGTGGAACTCA +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEAKYVDI*GVVWNS
Trigger: TGAGTTCCACACCACGCCCAAGATGTCCACGTACTT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCACGGTGGTGGGGAGTaGGATGGACCGGTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCHGGGE*DGPVVH
Trigger: GTGAACAACCGGTCCATCCAACTCCCCACCACCGTG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCAGCAGGACCCACTCATaGCCTGATGTGCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEASRTHS*PDVLKR
Trigger: TCTCTTCAGCACATCAGGCAATGAGTGGGTCCTGCT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTTCTCCATCCACTGCTaGAAAAGGCCAGAGACCATC +
Preference number: 5 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPFSIHC*KRPETI
Trigger: GATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAACGGTGGACCGCAGGTaGGGGTGGATCGGGTTATTA +
Preference number: 5 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRTVDRR*GWIGLL
Trigger: TAATAACCCGATCCACCCCAACCTGCGGTCCACCGT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCTCCAGGAATGGAGGCCAGCTTGTCAGCCTCATaGACCAGTGTGGCATTTCGG +
Preference number: 5 (lower is better)
Translates to: DFVLEGRTLVPRAPGMEASLSAS*TSVAFR
Trigger: CCGAAATGCCACACTGGTCAATGAGGCTGACAAGCT...GGCCTCCATTCCTGGAGCCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAAGGGCTGCCCGGAGCTaGTCAGCCTCATTGACCAGT +
Preference number: 5 (lower is better)
Translates to: RLAHRQRERGLETLSLRGRAARS*SASLTS
Trigger: ACTGGTCAATGAGGCTGACAAGCTCCGGGCAGCCCT...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTAGGATCCACAACTCTTaGCTGCAGGCCAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCRIHNS*LQARAA
Trigger: GGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGATCCT...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCACAGCAAGGCCGTTCATaGTCCATCGAGAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSQQGRS*SIESFC
Trigger: GCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTG...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTCAGCAAGGCCGTTCATaGTCCATCGAGAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAQQGRS*SIESFC
Trigger: GCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTG...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCGCAGTAGCACGACCTaGCGAAAAAGCACCGGAGTC +
Preference number: 5 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGRSSTT*RKSTGV
Trigger: GACTCCGGTGCTTTTTCGCAAGGTCGTGCTACTGCG...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559874.2
CDS TCA 90 bp CTCAGCTGTGACTCTGTGACAAGATCCTGGGTCTCGCTTCCCTGGTaGGACAGGCCTGGACTGGAAGTGCAGCAGCAACAGTGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: LSCDSVTRSWVSLPW*DRPGLEVQQQQWGR
Trigger: TCTACCCCACTGTTGCTGCTGCACTTCCAGTCCAGGCCTGTCTCACCAGGGAAGCGAGACCCAGGATCTTGTCACAGAGTCACAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558177.5
CDS GCA 90 bp CTTCATGGCCGGCTCATCGAAGCATGGGAAGGACTTCCGGGCATCTaGAGCCTGCATCTGTGTAGTGGCCACCACCTTTCTGACATTGCC +
Preference number: 5 (lower is better)
Translates to: LHGRLIEAWEGLPGI*SLHLCSGHHLSDIA
Trigger: GGCAATGTCAGAAAGGTGGTGGCCACTACACAGATGCAGGCTGCAGATGCCCGGAAGTCCTTCCCATGCTTCGATGAGCCGGCCATGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp GGTACGGTCTCAGCGTCACCCGGTAGGAATCGGGTTTCAGCGTGTTaGGGAGGCGGTAACGATTCCACGCTTTACTTTGGTCCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: GTVSASPGRNRVSAC*GGGNDSTLYFGPRW
Trigger: CCACCTTGGACCAAAGTAAAGCGTGGAATCGTTACCGCCTCCCCAACACGCTGAAACCCGATTCCTACCGGGTGACGCTGAGACCGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp AAGCGTGATGTTGAACTCGGCCTTCATGGCCGGCTCATCGAAGCATaGGAAGGACTTCCGGGCATCTGCAGCCTGCATCTGTGTAGTGGC +
Preference number: 5 (lower is better)
Translates to: KRDVELGLHGRLIEA*EGLPGICSLHLCSG
Trigger: GCCACTACACAGATGCAGGCTGCAGATGCCCGGAAGTCCTTCCCATGCTTCGATGAGCCGGCCATGAAGGCCGAGTTCAACATCACGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp GGACCTTTGGGAAGCATGTTGGACAGGGCTGTCAGGTCCTTGGGGTaGATAAGCGTGATGTTGAACTCGGCCTTCATGGCCGGCTCATCG +
Preference number: 5 (lower is better)
Translates to: GPLGSMLDRAVRSLG*ISVMLNSAFMAGSS
Trigger: CGATGAGCCGGCCATGAAGGCCGAGTTCAACATCACGCTTATCCACCCCAAGGACCTGACAGCCCTGTCCAACATGCTTCCCAAAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp GACACATGTGGGCACCTTGCATGGGGGCCGGGTGACTTCAAGGGCTaGGGACTATTTGCTGTTTTCTGTGAACCACTGGAGCACCACCTC +
Preference number: 5 (lower is better)
Translates to: DTCGHLAWGPGDFKG*GLFAVFCEPLEHHL
Trigger: GAGGTGGTGCTCCAGTGGTTCACAGAAAACAGCAAATAGTCCCCAGCCCTTGAAGTCACCCGGCCCCCATGCAAGGTGCCCACATGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCATTCCACGCTTTACTTaGGTCCAAGGTGGTGGCCGA +
Preference number: 5 (lower is better)
Translates to: TGRPPARPFIVHRELLLIIPRFT*VQGGGR
Trigger: TCGGCCACCACCTTGGACCAAAGTAAAGCGTGGAAT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGACCACCTTTCTGACATaGCCCTCCATGTACTCGCTG +
Preference number: 5 (lower is better)
Translates to: RERGLETLSLRGGHWCLGTTFLT*PSMYSL
Trigger: CAGCGAGTACATGGAGGGCAATGTCAGAAAGGTGGT...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAACCACCTTTCTGACATaGCCCTCCATGTACTCGCTG +
Preference number: 5 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRTTFLT*PSMYSL
Trigger: CAGCGAGTACATGGAGGGCAATGTCAGAAAGGTGGT...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGTGGATAAGCGTGATGTaGAACTCGGCCTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: RERGLETLSLRGGHWCLGWISVM*NSAFMA
Trigger: GGCCATGAAGGCCGAGTTCAACATCACGCTTATCCA...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCAGTGACATTCCAGTaGGGGTCTTCTGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSSVTFQ*GSSGSG
Trigger: CCCACTTCCAGAAGACCCCAACTGGAATGTCACTGA...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTCAGTGACATTCCAGTaGGGGTCTTCTGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: TGRPPARPFIVHRELLLISVTFQ*GSSGSG
Trigger: CCCACTTCCAGAAGACCCCAACTGGAATGTCACTGA...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGATCAGTGACATTCCAGTaGGGGTCTTCTGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRSVTFQ*GSSGSG
Trigger: CCCACTTCCAGAAGACCCCAACTGGAATGTCACTGA...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTAAGTACGTGGACATCTaGGGCGTGGTGTGGAACTCA +
Preference number: 5 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRAKYVDI*GVVWNS
Trigger: TGAGTTCCACACCACGCCCAAGATGTCCACGTACTT...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGCGGATCAAGACACCATaGGATGCCTGCTTCTCCACG +
Preference number: 5 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSRIKTP*DACFST
Trigger: CGTGGAGAAGCAGGCATCCAATGGTGTCTTGATCCG...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGACAGGGATGGCCGAGTGATCTGGGCCGGCGTGTaGATCTCCGAGGCGGGTGTG +
Preference number: 5 (lower is better)
Translates to: VEGVINDLCPIDDRDGRVIWAGV*ISEAGV
Trigger: CACACCCGCCTCGGAGATCAACACGCCGGCCCAGAT...CACTCGGCCATCCCTGTCATCAATCGGGCACAGATCATTAATGACGCCTTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CAA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAATGATCTGTGCCCGATaGATGACAGGGATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRMICAR*MTGMAE
Trigger: CTCGGCCATCCCTGTCATCAATCGGGCACAGATCAT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAATCAGGAAGAGGGTGTaGTTCAGCGCCAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRIRKRV*FSARVT
Trigger: TGTCACTCTGGCGCTGAACAACACCCTCTTCCTGAT...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTACGGTGGACCGCAGGTaGGGGTGGATCGGGTTATTA +
Preference number: 5 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCTVDRR*GWIGLL
Trigger: TAATAACCCGATCCACCCCAACCTGCGGTCCACCGT...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAAGCTTGTCAGCCTCATaGACCAGTGTGGCATTTCGG +
Preference number: 5 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRSLSAS*TSVAFR
Trigger: CCGAAATGCCACACTGGTCAATGAGGCTGACAAGCT...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGTCCCAGACCAGACCTaGCCCAATGACGTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: QRERGLETLSLRGGHWCLVPDQT*PNDVVG
Trigger: ACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGAC...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTAAAAGCTTCTTCCAGTaGCTCTGGACAAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPKSFFQ*LWTKSQ
Trigger: CTGGGACTTTGTCCAGAGCAACTGGAAGAAGCTTTT...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGACTGCCTGGATGAGGTaGGAGAAGGAGAACGAGCCA +
Preference number: 5 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGTAWMR*EKENEP
Trigger: TGGCTCGTTCTCCTTCTCCAACCTCATCCAGGCAGT...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAACTGCCTGGATGAGGTaGGAGAAGGAGAACGAGCCA +
Preference number: 5 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRTAWMR*EKENEP
Trigger: TGGCTCGTTCTCCTTCTCCAACCTCATCCAGGCAGT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACTGCCTGGATGAGGTaGGAGAAGGAGAACGAGCCA +
Preference number: 5 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSTAWMR*EKENEP
Trigger: TGGCTCGTTCTCCTTCTCCAACCTCATCCAGGCAGT...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CTCCAGGAATGGAGGCCCTGCACCAGCCGCTGGGATGGACACATGTGGGCACCTTTCTCCTTCACCCACTaGATGTTGGCTTTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: LQEWRPCTSRWDGHMWAPFSFTH*MLAFVF
Trigger: GAAGACGAAAGCCAACATCAAGTGGGTGAAGGAGAA...AGGTGCCCACATGTGTCCATCCCAGCGGCTGGTGCAGGGCCTCCATTCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCCAGCAAGGCCGTTCATaGTCCATCGAGAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: QRERGLETLSLRGGHWCLQQGRS*SIESFC
Trigger: GCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTG...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 90 bp CAGGTACCTGTTCAGGATCCACAACTCTTTGCTGCAGGCCAGGGCTaGCCGGAGCTTGTCAGCCTCATTGACCAGTGTGGCATTTCGGAA +
Preference number: 5 (lower is better)
Translates to: QVPVQDPQLFAAGQG*PELVSLIDQCGISE
Trigger: TTCCGAAATGCCACACTGGTCAATGAGGCTGACAAGCTCCGGGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGATCCTGAACAGGTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGAGCTGTTGGCGTTCTaGTTCTTCTCCTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: QRERGLETLSLRGGHWCLELLAF*FFSWEY
Trigger: GTACTCCCAGGAGAAGAACAAGAACGCCAACAGCTC...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAATTCCACGCTTTACTTaGGTCCAAGGTGGTGGCCGA +
Preference number: 5 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRIPRFT*VQGGGR
Trigger: TCGGCCACCACCTTGGACCAAAGTAAAGCGTGGAAT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGATGGATAAGCGTGATGTaGAACTCGGCCTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRWISVM*NSAFMA
Trigger: GGCCATGAAGGCCGAGTTCAACATCACGCTTATCCA...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAAAGTACGTGGACATCTaGGGCGTGGTGTGGAACTCA +
Preference number: 5 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRKYVDI*GVVWNS
Trigger: TGAGTTCCACACCACGCCCAAGATGTCCACGTACTT...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCGGATCAAGACACCATaGGATGCCTGCTTCTCCACG +
Preference number: 5 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCRIKTP*DACFST
Trigger: CGTGGAGAAGCAGGCATCCAATGGTGTCTTGATCCG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGCAATCTGGTCTGATTTaGGGAGTGGGTAGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: RERGLETLSLRGGHWCLGQSGLI*GVGRVC
Trigger: ACACACCCTACCCACTCCCAAAATCAGACCAGATTG...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGCAGGACCCACTCATaGCCTGATGTGCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSSRTHS*PDVLKR
Trigger: TCTCTTCAGCACATCAGGCAATGAGTGGGTCCTGCT...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTATGATCTGTGCCCGATaGATGACAGGGATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: GSSGTRLAHRQRERGLETMICAR*MTGMAE
Trigger: CTCGGCCATCCCTGTCATCAATCGGGCACAGATCAT...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGATCAGGAAGAGGGTGTaGTTCAGCGCCAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSIRKRV*FSARVT
Trigger: TGTCACTCTGGCGCTGAACAACACCCTCTTCCTGAT...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGATGGATCGGGTTATTATaGGGGTTCTCCATCCACTGC +
Preference number: 5 (lower is better)
Translates to: GERGYRAAPSKAVHCPSRWIGLL*GFSIHC
Trigger: GCAGTGGATGGAGAACCCCAATAATAACCCGATCCA...TCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGAGCTTGTCAGCCTCATaGACCAGTGTGGCATTTCGG +
Preference number: 5 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGSLSAS*TSVAFR
Trigger: CCGAAATGCCACACTGGTCAATGAGGCTGACAAGCT...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTGTCCCAGACCAGACCTaGCCCAATGACGTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCVPDQT*PNDVVG
Trigger: ACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGAC...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCAAAGCCTGTTTCCTCGTaGTCCTTCTTGAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSKPVSS*SFLNCS
Trigger: GGAGCAGTTCAAGAAGGACAACGAGGAAACAGGCTT...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCAAGCCTGTTTCCTCGTaGTCCTTCTTGAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: TGRPPARPFIVHRELLLIKPVSS*SFLNCS
Trigger: GGAGCAGTTCAAGAAGGACAACGAGGAAACAGGCTT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 90 bp CTCCAGCTGCTGCAGCTCATACTCGGTGGAGAATCGTCGTGTCACTaGCTGGATGAGGTTGGAGAAGGAGAACGAGCCACCACCATAATC +
Preference number: 5 (lower is better)
Translates to: LQLLQLILGGESSCH*LDEVGEGERATTII
Trigger: GATTATGGTGGTGGCTCGTTCTCCTTCTCCAACCTCATCCAGGCAGTGACACGACGATTCTCCACCGAGTATGAGCTGCAGCAGCTGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 90 bp AATCAAGCTAAACCTAGAGGCCTGGTCAGCAGAGGGGAACGCTACTaGGGTCTGGAGGCTGTGGGTCCTAGAGAAGGGCCTTTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: NQAKPRGLVSRGERY*GLEAVGPREGPLEN
Trigger: ATTCTCCAAAGGCCCTTCTCTAGGACCCACAGCCTCCAGACCCCAGTAGCGTTCCCCTCTGCTGACCAGGCCTCTAGGTTTAGCTTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559887.1
CDS-3UTR CAA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTGAGCTGTTGGCGTTCTaGTTCTTCTCCTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCELLAF*FFSWEY
Trigger: GTACTCCCAGGAGAAGAACAAGAACGCCAACAGCTC...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTATTCCACGCTTTACTTaGGTCCAAGGTGGTGGCCGA +
Preference number: 5 (lower is better)
Translates to: GSSGTRLAHRQRERGLETIPRFT*VQGGGR
Trigger: TCGGCCACCACCTTGGACCAAAGTAAAGCGTGGAAT...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTTCAGTGACATTCCAGTaGGGGTCTTCTGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCSVTFQ*GSSGSG
Trigger: CCCACTTCCAGAAGACCCCAACTGGAATGTCACTGA...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AATGGCACTGGGCCGGGCCCAGATCCGGATCTGAAATCACTCAGAGGTGGGATTAAGTACGTGGACATCTaGGGCGTGGTGTGGAACTCA +
Preference number: 5 (lower is better)
Translates to: NGTGPGPDPDLKSLRGGIKYVDI*GVVWNS
Trigger: TGAGTTCCACACCACGCCCAAGATGTCCACGTACTT...AATCCCACCTCTGAGTGATTTCAGATCCGGATCTGGGCCCGGCCCAGTGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CAA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACAATCTGGTCTGATTTaGGGAGTGGGTAGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRQSGLI*GVGRVC
Trigger: ACACACCCTACCCACTCCCAAAATCAGACCAGATTG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TTATGGGCACTGGCCAGGTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGGACGCCAGGCCCTGCTaGAATACGTCCTCGGACAGG +
Preference number: 5 (lower is better)
Translates to: LWALARLKASLMICARLMDARPC*NTSSDR
Trigger: CCTGTCCGAGGACGTATTCAAGCAGGGCCTGGCGTC...CATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGCCAGTGCCCATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CAA 90 bp CTCTCTGCAGCTGAGTCTGAATCTTCCTCCAGTTCTCTTCGTCGTAGTTCACCCCACGGTGGTGGGGAGTaGGATGGACCGGTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: LSAAESESSSSSLRRSSPHGGGE*DGPVVH
Trigger: GTGAACAACCGGTCCATCCAACTCCCCACCACCGTG...GGGTGAACTACGACGAAGAGAACTGGAGGAAGATTCAGACTCAGCTGCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CAA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCTTCTCCATCCACTGCTaGAAAAGGCCAGAGACCATC +
Preference number: 5 (lower is better)
Translates to: QRERGLETLSLRGGHWCLFSIHC*KRPETI
Trigger: GATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAA...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCACCTTGCCCAATGACGTaGTTGGTAATGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSPCPMT*LVMLMM
Trigger: CATCATCAGCATTACCAACAACGTCATTGGGCAAGG...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCAAAAGCTTCTTCCAGTaGCTCTGGACAAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: TGRPPARPFIVHRELLLIKSFFQ*LWTKSQ
Trigger: CTGGGACTTTGTCCAGAGCAACTGGAAGAAGCTTTT...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAAGCCTGTTTCCTCGTaGTCCTTCTTGAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: KGERGYRAAPSKAVHCPSKPVSS*SFLNCS
Trigger: GGAGCAGTTCAAGAAGGACAACGAGGAAACAGGCTT...CGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCGGGTTCTCCTTCACCCACTaGATGTTGGCTTTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: RERGLETLSLRGGHWCLGFSFTH*MLAFVF
Trigger: GAAGACGAAAGCCAACATCAAGTGGGTGAAGGAGAA...CCCGAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATTCTCCTTCACCCACTaGATGTTGGCTTTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: VQGGPQQGRSLSIESFCSFSFTH*MLAFVF
Trigger: GAAGACGAAAGCCAACATCAAGTGGGTGAAGGAGAA...TGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AGGCAGCCTGGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGAGGGCTGGGGACTATTaGCTGTTTTCTGTGAACCAC +
Preference number: 5 (lower is better)
Translates to: RQPGSSGTRLAHRQRERGRAGDY*LFSVNH
Trigger: GTGGTTCACAGAAAACAGCAAATAGTCCCCAGCCCT...CCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCCAGGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCAGGGCTGGGGACTATTaGCTGTTTTCTGTGAACCAC +
Preference number: 5 (lower is better)
Translates to: QRERGLETLSLRGGHWCLRAGDY*LFSVNH
Trigger: GTGGTTCACAGAAAACAGCAAATAGTCCCCAGCCCT...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 90 bp CGTGAAGGAGAGATGGGCCCAGCCTCATACCAAGACACCATTGGATaGCTGCTTCTCCACGTAGTCGAACTCACTGACAATGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: REGEMGPASYQDTIG*LLLHVVELTDNEGQ
Trigger: CTGGCCTTCATTGTCAGTGAGTTCGACTACGTGGAGAAGCAGGCATCCAATGGTGTCTTGGTATGAGGCTGGGCCCATCTCTCCTTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS-3UTR CAA 90 bp AGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGACAATCTGGTCTGATTTaGGGAGTGGGTAGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: RLAHRQRERGLETLSLRGQSGLI*GVGRVC
Trigger: ACACACCCTACCCACTCCCAAAATCAGACCAGATTG...TCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTTCTCCATCCACTGCTaGAAAAGGCCAGAGACCATC +
Preference number: 5 (lower is better)
Translates to: GSSGTRLAHRQRERGLETFSIHC*KRPETI
Trigger: GATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAA...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp ACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTCTGCTCATCTGCCCAATGACGTTGTaGGTAATGCTGATGATGGTA +
Preference number: 5 (lower is better)
Translates to: TGRPPARPFIVHRELLLICPMTL*VMLMMV
Trigger: TACCATCATCAGCATTACCAACAACGTCATTGGGCA...GATGAGCAGAAGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGAGAGCTTGCCCAATGACGTTGTaGGTAATGCTGATGATGGTA +
Preference number: 5 (lower is better)
Translates to: ERGYRAAPSKAVHCPSRACPMTL*VMLMMV
Trigger: TACCATCATCAGCATTACCAACAACGTCATTGGGCA...AGCTCTCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp AAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCATCGACCTTGCCCAATGACGTaGTTGGTAATGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: KVKEGTGRPPARPFIVHRPCPMT*LVMLMM
Trigger: CATCATCAGCATTACCAACAACGTCATTGGGCAAGG...TCGATGGACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS TCA 90 bp GGTTGGGGTGGATCGGGTTATTATTGGGGTTCTCCATCCACTGCTTaGAAAGGCCAGAGACCATCTCCTCACACTCTGGAACTCCGTTGG +
Preference number: 5 (lower is better)
Translates to: GWGGSGYYWGSPSTA*KGQRPSPHTLELRW
Trigger: CCAACGGAGTTCCAGAGTGTGAGGAGATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAACCCCAATAATAACCCGATCCACCCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GCCAGGTTGAAGGCGTCATTAATGATCTGTGCCCGATTGATGACAGGGATGGCCATCAGGAAGAGGGTGTaGTTCAGCGCCAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: ARLKASLMICARLMTGMAIRKRV*FSARVT
Trigger: TGTCACTCTGGCGCTGAACAACACCCTCTTCCTGAT...GGCCATCCCTGTCATCAATCGGGCACAGATCATTAATGACGCCTTCAACCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CAA 90 bp CAGAGAGAACGTGGGCTGGAGACTTTGTCCTTGAGGGGAGGACACTGGTGCCTCTGCCCAATGACGTTGTaGGTAATGCTGATGATGGTA +
Preference number: 5 (lower is better)
Translates to: QRERGLETLSLRGGHWCLCPMTL*VMLMMV
Trigger: TACCATCATCAGCATTACCAACAACGTCATTGGGCA...GAGGCACCAGTGTCCTCCCCTCAAGGACAAAGTCTCCAGCCCACGTTCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp TTAGGGAAAGGTGAAAGAGGGTACAGGGCGGCCCCCAGCAAGGCCGTTCATTGTCCTTGCCCAATGACGTaGTTGGTAATGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: LGKGERGYRAAPSKAVHCPCPMT*LVMLMM
Trigger: CATCATCAGCATTACCAACAACGTCATTGGGCAAGG...ACAATGAACGGCCTTGCTGGGGGCCGCCCTGTACCCTCTTTCACCTTTCCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTCCTTGCCCAATGACGTaGTTGGTAATGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: GSSGTRLAHRQRERGLETPCPMT*LVMLMM
Trigger: CATCATCAGCATTACCAACAACGTCATTGGGCAAGG...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GGGTCATCAGGAACTAGACTGGCTCACAGGCAGAGAGAACGTGGGCTGGAGACTTGCCCAATGACGTTGTaGGTAATGCTGATGATGGTA +
Preference number: 5 (lower is better)
Translates to: GSSGTRLAHRQRERGLETCPMTL*VMLMMV
Trigger: TACCATCATCAGCATTACCAACAACGTCATTGGGCA...AGTCTCCAGCCCACGTTCTCTCTGCCTGTGAGCCAGTCTAGTTCCTGATGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS-3UTR CAA 90 bp GCAGCTGAGTCTGAATCTTCCTCCAGTTCTCTTCGTCGTAGTTCACCCGGTAATAGCAGGACCCACTCATaGCCTGATGTGCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: AAESESSSSSLRRSSPGNSRTHS*PDVLKR
Trigger: TCTCTTCAGCACATCAGGCAATGAGTGGGTCCTGCT...ATTACCGGGTGAACTACGACGAAGAGAACTGGAGGAAGATTCAGACTCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560030.1
CDS-3UTR CAA 90 bp GTCATAATGACCAGCAAAGAAGTTAAGGATGGGGCCCGTCACGTTCAGGGCATACATACCAAGACACCATaGGATGCCTGCTTCTCCACG +
Preference number: 5 (lower is better)
Translates to: VIMTSKEVKDGARHVQGIHTKTP*DACFST
Trigger: CGTGGAGAAGCAGGCATCCAATGGTGTCTTGGTATG...TATGCCCTGAACGTGACGGGCCCCATCCTTAACTTCTTTGCTGGTCATTATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS GCA 90 bp AAAAGCTTCTTCCAGTTGCTCTGGACAAAGTCCCAGACCAGACCTTaGCCAATGACGTTGTTGGTAATGCTGATGATGGTAGAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: KSFFQLLWTKSQTRP*PMTLLVMLMMVEVA
Trigger: CGCCACCTCTACCATCATCAGCATTACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGACTTTGTCCAGAGCAACTGGAAGAAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp ATCTGCTTGAGAGCTGGGCCGCCGGGCGCTGGAACCTaGACCCTGGACCCTGGCGGGTTCCGAGCTGCGCCG +
Preference number: 6 (lower is better)
Translates to: ICLRAGPPGAGT*TLDPGGFRAAP
Trigger: CGGCGCAGCTCGGAACCCGCCAGGGTCCAGGGTCCAGGTTCCAGCGCCCGGCGGCCCAGCTCTCAAGCAGAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS CCA 72 bp TACTTTGGTCCAAGGTGGTGGCCGAGGCGGGGTTGGTaGTGGCTGAGGCGGACGGGGTGGTGGAGGCCACGG +
Preference number: 6 (lower is better)
Translates to: YFGPRWWPRRGW*WLRRTGWWRPR
Trigger: CCGTGGCCTCCACCACCCCGTCCGCCTCAGCCACCACCAACCCCGCCTCGGCCACCACCTTGGACCAAAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp TGCATTGATCTGCTTGAGAGCTGGGCCGCCGGGCGCTaGAACCTGGACCCTGGACCCTGGCGGGTTCCGAGC +
Preference number: 6 (lower is better)
Translates to: CIDLLESWAAGR*NLDPGPWRVPS
Trigger: GCTCGGAACCCGCCAGGGTCCAGGGTCCAGGTTCCAGCGCCCGGCGGCCCAGCTCTCAAGCAGATCAATGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS CCA 72 bp GCGGCCAGGTGGCATTGCATTGATCTGCTTGAGAGCTaGGCCGCCGGGCGCTGGAACCTGGACCCTGGACCC +
Preference number: 6 (lower is better)
Translates to: AARWHCIDLLES*AAGRWNLDPGP
Trigger: GGGTCCAGGGTCCAGGTTCCAGCGCCCGGCGGCCCAGCTCTCAAGCAGATCAATGCAATGCCACCTGGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS CCA 72 bp CGAAGGTCACTGGACTGGGCAGGGGCACGCTCCGCCTaGGGAGAGGAGATCCAGGAACGGTGTGTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: RRSLDWAGARSA*GEEIQERCVEL
Trigger: CAGCTCCACACACCGTTCCTGGATCTCCTCTCCCCAGGCGGAGCGTGCCCCTGCCCAGTCCAGTGACCTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp TCAGGGCATAATCGCCGTGGCCCGCCGCAATGGCACTaGGCCGGGCCCAGATCCGGATCTGCAAGGTGTGAG +
Preference number: 6 (lower is better)
Translates to: SGHNRRGPPQWH*AGPRSGSARCE
Trigger: CTCACACCTTGCAGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559887.1
CDS CAA 90 bp CCCAGTGGGCAAAGCAAGCGGCCAGGTGGCATTGCATTGATCTGCTaGAGAGCTGGGCCGCCGGGCGCTGGAACCTGGACCCTGGACCCT +
Preference number: 6 (lower is better)
Translates to: PSGQSKRPGGIALIC*RAGPPGAGTWTLDP
Trigger: AGGGTCCAGGGTCCAGGTTCCAGCGCCCGGCGGCCCAGCTCTCAAGCAGATCAATGCAATGCCACCTGGCCGCTTGCTTTGCCCACTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS CAA 90 bp GGCTGTAGGCCCAGTGGGCAAAGCAAGCGGCCAGGTGGCATTGCATaGATCTGCTTGAGAGCTGGGCCGCCGGGCGCTGGAACCTGGACC +
Preference number: 6 (lower is better)
Translates to: GCRPSGQSKRPGGIA*ICLRAGPPGAGTWT
Trigger: GGTCCAGGTTCCAGCGCCCGGCGGCCCAGCTCTCAAGCAGATCAATGCAATGCCACCTGGCCGCTTGCTTTGCCCACTGGGCCTACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS GCA 72 bp GGGCAAAGCAAGCGGCCAGGTGGCATTGCATTGATCTaGTTGAGAGCTGGGCCGCCGGGCGCTGGAACCTGG +
Preference number: 6 (lower is better)
Translates to: GQSKRPGGIALI*LRAGPPGAGTW
Trigger: CCAGGTTCCAGCGCCCGGCGGCCCAGCTCTCAAGCAGATCAATGCAATGCCACCTGGCCGCTTGCTTTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS CCA 72 bp TCAGGGCATAATCGCCGTGGCCCGCCGCAATGGCACTaGGCCGGGCCCAGATCCGGATCAAGACACCATTGG +
Preference number: 6 (lower is better)
Translates to: SGHNRRGPPQWH*AGPRSGSRHHW
Trigger: CCAATGGTGTCTTGATCCGGATCTGGGCCCGGCCCAGTGCCATTGCGGCGGGCCACGGCGATTATGCCCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp CCCAGTGGGCAAAGCAAGCGGCCAGGTGGCATTGCATaGATCTGCTTGAGAGCTGGGCCGCCGGGCGCTGGA +
Preference number: 6 (lower is better)
Translates to: PSGQSKRPGGIA*ICLRAGPPGAG
Trigger: TCCAGCGCCCGGCGGCCCAGCTCTCAAGCAGATCAATGCAATGCCACCTGGCCGCTTGCTTTGCCCACTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS TCA 72 bp GAACGGGAAGACCCCTCAAGCCGGGGCCAGCCCACGTaGAGGAGAGATGGGCCCAGCCTCATACCAAGACAC +
Preference number: 6 (lower is better)
Translates to: EREDPSSRGQPT*RRDGPSLIPRH
Trigger: GTGTCTTGGTATGAGGCTGGGCCCATCTCTCCTTCACGTGGGCTGGCCCCGGCTTGAGGGGTCTTCCCGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS CCA 72 bp AGGCGGACGGGGTGGTGGAGGCCACGGGGGAGCTGTTaGCGTTCTTGTTCTTCTCCTGGGAGTACACCACTG +
Preference number: 6 (lower is better)
Translates to: RRTGWWRPRGSC*RSCSSPGSTPL
Trigger: CAGTGGTGTACTCCCAGGAGAAGAACAAGAACGCCAACAGCTCCCCCGTGGCCTCCACCACCCCGTCCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp AAGCAAACAGTGTCTGGTTACAGGCTGCAGGCGGCCTaGGATCAGGCCCGAGGGCTGAAGGGCAGGCTTCCG +
Preference number: 6 (lower is better)
Translates to: KQTVSGYRLQAA*DQARGLKGRLP
Trigger: CGGAAGCCTGCCCTTCAGCCCTCGGGCCTGATCCCAGGCCGCCTGCAGCCTGTAACCAGACACTGTTTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS CAA 72 bp ATGGCGTCAAACAGCTCACTGATCTGGGCCGGCGTGTaGATCTCCGAGGCGGGTGTGGACAGCGGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: MASNSSLIWAGV*ISEAGVDSGWE
Trigger: CTCCCACCCGCTGTCCACACCCGCCTCGGAGATCAACACGCCGGCCCAGATCAGTGAGCTGTTTGACGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560030.1
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp CAAAGCAAGCGGCCAGGTGGCATTGCATTGATCTGCTaGAGAGCTGGGCCGCCGGGCGCTGGAACCTGGACC +
Preference number: 6 (lower is better)
Translates to: QSKRPGGIALIC*RAGPPGAGTWT
Trigger: GGTCCAGGTTCCAGCGCCCGGCGGCCCAGCTCTCAAGCAGATCAATGCAATGCCACCTGGCCGCTTGCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560137.2
CDS CCA 72 bp GGTAACGATTCCACGCTTTACTTTGGTCCAAGGTGGTaGCCGAGGCGGGGTTGGTGGTGGCTGAGGCGGACG +
Preference number: 6 (lower is better)
Translates to: GNDSTLYFGPRW*PRRGWWWLRRT
Trigger: CGTCCGCCTCAGCCACCACCAACCCCGCCTCGGCCACCACCTTGGACCAAAGTAAAGCGTGGAATCGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp CCAGCCGCTGGGATGGACACATGTGGGCACCTTGCATaGGGGCCGGGTGACTTCAAGGGCTGGGGACTATTT +
Preference number: 6 (lower is better)
Translates to: PAAGMDTCGHLA*GPGDFKGWGLF
Trigger: AAATAGTCCCCAGCCCTTGAAGTCACCCGGCCCCCATGCAAGGTGCCCACATGTGTCCATCCCAGCGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 90 bp GAGGCGGACGGGGTGGTGGAGGCCACGGGGGAGCTGTTGGCGTTCTaGTTCTTCTCCTGGGAGTACACCACTGACAGTGCGATGATTGTG +
Preference number: 6 (lower is better)
Translates to: EADGVVEATGELLAF*FFSWEYTTDSAMIV
Trigger: CACAATCATCGCACTGTCAGTGGTGTACTCCCAGGAGAAGAACAAGAACGCCAACAGCTCCCCCGTGGCCTCCACCACCCCGTCCGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 90 bp GCTTGCTCCAGGGCCCGGGTGCCTGAGCCGAAGCCTGTTTCCTCGTaGTCCTTCTTGAACTGCTCCAGCTGCTGCAGCTCATACTCGGTG +
Preference number: 6 (lower is better)
Translates to: ACSRARVPEPKPVSS*SFLNCSSCCSSYSV
Trigger: CACCGAGTATGAGCTGCAGCAGCTGGAGCAGTTCAAGAAGGACAACGAGGAAACAGGCTTCGGCTCAGGCACCCGGGCCCTGGAGCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS TCA 72 bp CCATCTCATACTGGCTGTCCTTCACCAGGGAGCCCTTaGGGTGCACCACCAGGTACTCGGTGGGCTCCACCA +
Preference number: 6 (lower is better)
Translates to: PSHTGCPSPGSP*GAPPGTRWAPP
Trigger: TGGTGGAGCCCACCGAGTACCTGGTGGTGCACCTCAAGGGCTCCCTGGTGAAGGACAGCCAGTATGAGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 72 bp TGCACACGGCTGCCACGCCCAGGAGGATCCCCAGGATaGCCAGGGACTTGGAAATATAGAAGCCCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: CTRLPRPGGSPG*PGTWKYRSPWP
Trigger: TGGCCAAGGGCTTCTATATTTCCAAGTCCCTGGGCATCCTGGGGATCCTCCTGGGCGTGGCAGCCGTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 72 bp TCATACTGGCTGTCCTTCACCAGGGAGCCCTTGAGGTaGACCACCAGGTACTCGGTGGGCTCCACCAGCTCA +
Preference number: 6 (lower is better)
Translates to: SYWLSFTREPLR*TTRYSVGSTSS
Trigger: TGAGCTGGTGGAGCCCACCGAGTACCTGGTGGTGCACCTCAAGGGCTCCCTGGTGAAGGACAGCCAGTATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp GCCAACTCCCCCTCGAACTCGCTGTCCATCTCATACTaGCTGTCCTTCACCAGGGAGCCCTTGAGGTGCACC +
Preference number: 6 (lower is better)
Translates to: ANSPSNSLSISY*LSFTREPLRCT
Trigger: GGTGCACCTCAAGGGCTCCCTGGTGAAGGACAGCCAGTATGAGATGGACAGCGAGTTCGAGGGGGAGTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp AAACCTAGAGGCCTGGTCAGCAGAGGGGAACGCTACTaGGGTCTGGAGGCTGTGGGTCCTAGAGAAGGGCCT +
Preference number: 6 (lower is better)
Translates to: KPRGLVSRGERY*GLEAVGPREGP
Trigger: AGGCCCTTCTCTAGGACCCACAGCCTCCAGACCCCAGTAGCGTTCCCCTCTGCTGACCAGGCCTCTAGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559887.1
CDS CAA 72 bp CGTGTTGGGGAGGCGGTAACGATTCCACGCTTTACTTaGGTCCAAGGTGGTGGCCGAGGCGGGGTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: RVGEAVTIPRFT*VQGGGRGGVGG
Trigger: ACCACCAACCCCGCCTCGGCCACCACCTTGGACCAAAGTAAAGCGTGGAATCGTTACCGCCTCCCCAACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp TCCATCTCATACTGGCTGTCCTTCACCAGGGAGCCCTaGAGGTGCACCACCAGGTACTCGGTGGGCTCCACC +
Preference number: 6 (lower is better)
Translates to: SISYWLSFTREP*RCTTRYSVGST
Trigger: GGTGGAGCCCACCGAGTACCTGGTGGTGCACCTCAAGGGCTCCCTGGTGAAGGACAGCCAGTATGAGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp AGGGCCCGGGTGCCTGAGCCGAAGCCTGTTTCCTCGTaGTCCTTCTTGAACTGCTCCAGCTGCTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: RARVPEPKPVSS*SFLNCSSCCSS
Trigger: TGAGCTGCAGCAGCTGGAGCAGTTCAAGAAGGACAACGAGGAAACAGGCTTCGGCTCAGGCACCCGGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp CCAGCGGTTCATGATGTCCCGCACGGTGGTGGGGAGTaGGATGGACCGGTTGTTCACAGCCTCAGCTGTGAC +
Preference number: 6 (lower is better)
Translates to: PAVHDVPHGGGE*DGPVVHSLSCD
Trigger: GTCACAGCTGAGGCTGTGAACAACCGGTCCATCCAACTCCCCACCACCGTGCGGGACATCATGAACCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558177.5
CDS CAA 90 bp AACTCGCTGTCCATCTCATACTGGCTGTCCTTCACCAGGGAGCCCTaGAGGTGCACCACCAGGTACTCGGTGGGCTCCACCAGCTCAGTC +
Preference number: 6 (lower is better)
Translates to: NSLSISYWLSFTREP*RCTTRYSVGSTSSV
Trigger: GACTGAGCTGGTGGAGCCCACCGAGTACCTGGTGGTGCACCTCAAGGGCTCCCTGGTGAAGGACAGCCAGTATGAGATGGACAGCGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 90 bp CTGCAGGGTCCAGCGGTTCATGATGTCCCGCACGGTGGTGGGGAGTaGGATGGACCGGTTGTTCACAGCCTCAGCTGTGACTCTGTGACA +
Preference number: 6 (lower is better)
Translates to: LQGPAVHDVPHGGGE*DGPVVHSLSCDSVT
Trigger: TGTCACAGAGTCACAGCTGAGGCTGTGAACAACCGGTCCATCCAACTCCCCACCACCGTGCGGGACATCATGAACCGCTGGACCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558177.5
CDS GCA 72 bp TGTGGACAGCGGGTGGGAGGAGGCCAGTGCATCCACTaGCATCACGCGGTACACATCATTCAGCACCATGAG +
Preference number: 6 (lower is better)
Translates to: CGQRVGGGQCIH*HHAVHIIQHHE
Trigger: CTCATGGTGCTGAATGATGTGTACCGCGTGATGGCAGTGGATGCACTGGCCTCCTCCCACCCGCTGTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560030.1
ENST00000560137.2
ENST00000679248.1
CDS GCA 72 bp GTTCAGGATCCACAACTCTTTGCTGCAGGCCAGGGCTaGCCGGAGCTTGTCAGCCTCATTGACCAGTGTGGC +
Preference number: 6 (lower is better)
Translates to: VQDPQLFAAGQG*PELVSLIDQCG
Trigger: GCCACACTGGTCAATGAGGCTGACAAGCTCCGGGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGATCCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 72 bp GAGCACCTAGAGTTCCCCTTCCTCTTCACTGAGAGCTaGGGCGGAGGCTTTAGACCGAGGAGCGAGATCTGG +
Preference number: 6 (lower is better)
Translates to: EHLEFPFLFTES*GGGFRPRSEIW
Trigger: CCAGATCTCGCTCCTCGGTCTAAAGCCTCCGCCGCAGCTCTCAGTGAAGAGGAAGGGGAACTCTAGGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679248.1
CDS CAA 90 bp GTGCTGGGACCTTTGGGAAGCATGTTGGACAGGGCTGTCAGGTCCTaGGGGTGGATAAGCGTGATGTTGAACTCGGCCTTCATGGCCGGC +
Preference number: 6 (lower is better)
Translates to: VLGPLGSMLDRAVRS*GWISVMLNSAFMAG
Trigger: GCCGGCCATGAAGGCCGAGTTCAACATCACGCTTATCCACCCCAAGGACCTGACAGCCCTGTCCAACATGCTTCCCAAAGGTCCCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 90 bp GCCTCCCAGGGCATGTACTGTCTCTCTTCAATCAGGAAGAGGGTGTaGTTCAGCGCCAGAGTGACAGGGACCTTATGGGCACTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: ASQGMYCLSSIRKRV*FSARVTGTLWALAR
Trigger: CCTGGCCAGTGCCCATAAGGTCCCTGTCACTCTGGCGCTGAACAACACCCTCTTCCTGATTGAAGAGAGACAGTACATGCCCTGGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300060.7
ENST00000558177.5
ENST00000559761.5
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS TCA 72 bp TGTTCTTCTCCTGGGAGTACACCACTGACAGTGCGATaGTTGTGCACACGGCTGCCACGCCCAGGAGGATCC +
Preference number: 6 (lower is better)
Translates to: CSSPGSTPLTVR*LCTRLPRPGGS
Trigger: GGATCCTCCTGGGCGTGGCAGCCGTGTGCACAATCATCGCACTGTCAGTGGTGTACTCCCAGGAGAAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS TCA 72 bp GACTCTGTGACAAGATCCTGGGTCTCGCTTCCCTGGTaGGACAGGCCTGGACTGGAAGTGCAGCAGCAACAG +
Preference number: 6 (lower is better)
Translates to: DSVTRSWVSLPW*DRPGLEVQQQQ
Trigger: CTGTTGCTGCTGCACTTCCAGTCCAGGCCTGTCTCACCAGGGAAGCGAGACCCAGGATCTTGTCACAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558177.5
CDS GCA 72 bp CATGTACTCGCTGCGGTAGAAGCCCGCCAGGTCATCTaGCAACTCCCCCTCGAACTCGCTGTCCATCTCATA +
Preference number: 6 (lower is better)
Translates to: HVLAAVEARQVI*QLPLELAVHLI
Trigger: TATGAGATGGACAGCGAGTTCGAGGGGGAGTTGGCAGATGACCTGGCGGGCTTCTACCGCAGCGAGTACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 72 bp CGGCTCATCGAAGCATGGGAAGGACTTCCGGGCATCTaGAGCCTGCATCTGTGTAGTGGCCACCACCTTTCT +
Preference number: 6 (lower is better)
Translates to: RLIEAWEGLPGI*SLHLCSGHHLS
Trigger: AGAAAGGTGGTGGCCACTACACAGATGCAGGCTGCAGATGCCCGGAAGTCCTTCCCATGCTTCGATGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 72 bp AGCTCAGGTACCTGTTCAGGATCCACAACTCTTTGCTaGAGGCCAGGGCTGCCCGGAGCTTGTCAGCCTCAT +
Preference number: 6 (lower is better)
Translates to: SSGTCSGSTTLC*RPGLPGACQPH
Trigger: ATGAGGCTGACAAGCTCCGGGCAGCCCTGGCCTGCAGCAAAGAGTTGTGGATCCTGAACAGGTACCTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 72 bp GGGACTCGTAGTTCAGAAGGCGCAGTAGCACGACCTTaGGAAAAAGCACCGGAGTCGGGAACACGCGCTTCT +
Preference number: 6 (lower is better)
Translates to: GTRSSEGAVARP*EKAPESGTRAS
Trigger: AGAAGCGCGTGTTCCCGACTCCGGTGCTTTTTCGCAAGGTCGTGCTACTGCGCCTTCTGAACTACGAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559874.2
CDS CAA 72 bp AGGCCAGAGACCATCTCCTCACACTCTGGAACTCCGTaGGAGCAGGCGGTGCTGATGGCATTAACCTCGCTG +
Preference number: 6 (lower is better)
Translates to: RPETISSHSGTP*EQAVLMALTSL
Trigger: CAGCGAGGTTAATGCCATCAGCACCGCCTGCTCCAACGGAGTTCCAGAGTGTGAGGAGATGGTCTCTGGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 90 bp ATGTTGGACAGGGCTGTCAGGTCCTTGGGGTGGATAAGCGTGATGTaGAACTCGGCCTTCATGGCCGGCTCATCGAAGCATGGGAAGGAC +
Preference number: 6 (lower is better)
Translates to: MLDRAVRSLGWISVM*NSAFMAGSSKHGKD
Trigger: GTCCTTCCCATGCTTCGATGAGCCGGCCATGAAGGCCGAGTTCAACATCACGCTTATCCACCCCAAGGACCTGACAGCCCTGTCCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS TCA 72 bp GTTGGCGTTCTTGTTCTTCTCCTGGGAGTACACCACTaGCAGTGCGATGATTGTGCACACGGCTGCCACGCC +
Preference number: 6 (lower is better)
Translates to: VGVLVLLLGVHH*QCDDCAHGCHA
Trigger: GGCGTGGCAGCCGTGTGCACAATCATCGCACTGTCAGTGGTGTACTCCCAGGAGAAGAACAAGAACGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 72 bp GGGCCGGGCCCAGATCCGGATCAAGACACCATTGGATaGCTGCTTCTCCACGTAGTCGAACTCACTGACAAT +
Preference number: 6 (lower is better)
Translates to: GPGPDPDQDTIG*LLLHVVELTDN
Trigger: ATTGTCAGTGAGTTCGACTACGTGGAGAAGCAGGCATCCAATGGTGTCTTGATCCGGATCTGGGCCCGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 72 bp CTGCAGCTCATACTCGGTGGAGAATCGTCGTGTCACTaGCTGGATGAGGTTGGAGAAGGAGAACGAGCCACC +
Preference number: 6 (lower is better)
Translates to: LQLILGGESSCH*LDEVGEGERAT
Trigger: GGTGGCTCGTTCTCCTTCTCCAACCTCATCCAGGCAGTGACACGACGATTCTCCACCGAGTATGAGCTGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp GCCACGGGGGAGCTGTTGGCGTTCTTGTTCTTCTCCTaGGAGTACACCACTGACAGTGCGATGATTGTGCAC +
Preference number: 6 (lower is better)
Translates to: ATGELLAFLFFS*EYTTDSAMIVH
Trigger: GTGCACAATCATCGCACTGTCAGTGGTGTACTCCCAGGAGAAGAACAAGAACGCCAACAGCTCCCCCGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp GGAAGCATGTTGGACAGGGCTGTCAGGTCCTTGGGGTaGATAAGCGTGATGTTGAACTCGGCCTTCATGGCC +
Preference number: 6 (lower is better)
Translates to: GSMLDRAVRSLG*ISVMLNSAFMA
Trigger: GGCCATGAAGGCCGAGTTCAACATCACGCTTATCCACCCCAAGGACCTGACAGCCCTGTCCAACATGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp AGGGCTGTCAGGTCCTTGGGGTGGATAAGCGTGATGTaGAACTCGGCCTTCATGGCCGGCTCATCGAAGCAT +
Preference number: 6 (lower is better)
Translates to: RAVRSLGWISVM*NSAFMAGSSKH
Trigger: ATGCTTCGATGAGCCGGCCATGAAGGCCGAGTTCAACATCACGCTTATCCACCCCAAGGACCTGACAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 90 bp TGCTTGAAAAGGCCAGAGACCATCTCCTCACACTCTGGAACTCCGTaGGAGCAGGCGGTGCTGATGGCATTAACCTCGCTGTACTGGTCC +
Preference number: 6 (lower is better)
Translates to: CLKRPETISSHSGTP*EQAVLMALTSLYWS
Trigger: GGACCAGTACAGCGAGGTTAATGCCATCAGCACCGCCTGCTCCAACGGAGTTCCAGAGTGTGAGGAGATGGTCTCTGGCCTTTTCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp TCAGCGTCACCCGGTAGGAATCGGGTTTCAGCGTGTTaGGGAGGCGGTAACGATTCCACGCTTTACTTTGGT +
Preference number: 6 (lower is better)
Translates to: SASPGRNRVSAC*GGGNDSTLYFG
Trigger: ACCAAAGTAAAGCGTGGAATCGTTACCGCCTCCCCAACACGCTGAAACCCGATTCCTACCGGGTGACGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp AGCTCATACTCGGTGGAGAATCGTCGTGTCACTGCCTaGATGAGGTTGGAGAAGGAGAACGAGCCACCACCA +
Preference number: 6 (lower is better)
Translates to: SSYSVENRRVTA*MRLEKENEPPP
Trigger: TGGTGGTGGCTCGTTCTCCTTCTCCAACCTCATCCAGGCAGTGACACGACGATTCTCCACCGAGTATGAGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp CCTTTGGGAAGCATGTTGGACAGGGCTGTCAGGTCCTaGGGGTGGATAAGCGTGATGTTGAACTCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: PLGSMLDRAVRS*GWISVMLNSAF
Trigger: GAAGGCCGAGTTCAACATCACGCTTATCCACCCCAAGGACCTGACAGCCCTGTCCAACATGCTTCCCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 90 bp CAGTTGCTCTGGACAAAGTCCCAGACCAGACCTTGCCCAATGACGTaGTTGGTAATGCTGATGATGGTAGAGGTGGCGTCCTGCTTCCGG +
Preference number: 6 (lower is better)
Translates to: QLLWTKSQTRPCPMT*LVMLMMVEVASCFR
Trigger: CCGGAAGCAGGACGCCACCTCTACCATCATCAGCATTACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGACTTTGTCCAGAGCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp AAGGCCAGCAAGTACGTGGACATCTTGGGCGTGGTGTaGAACTCAGTGACATTCCAGTTGGGGTCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: KASKYVDILGVV*NSVTFQLGSSG
Trigger: TCCAGAAGACCCCAACTGGAATGTCACTGAGTTCCACACCACGCCCAAGATGTCCACGTACTTGCTGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560028.1
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp GGGGTCTGGAGGCTGTGGGTCCTAGAGAAGGGCCTTTaGAGAATAACAATCATCATAGCCACCGTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: GVWRLWVLEKGL*RITIIIATVCL
Trigger: CAGACAGACGGTGGCTATGATGATTGTTATTCTCCAAAGGCCCTTCTCTAGGACCCACAGCCTCCAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559887.1
CDS GCA 72 bp GAGATGGGCCCAGCCTCATACCAAGACACCATTGGATaGCTGCTTCTCCACGTAGTCGAACTCACTGACAAT +
Preference number: 6 (lower is better)
Translates to: EMGPASYQDTIG*LLLHVVELTDN
Trigger: ATTGTCAGTGAGTTCGACTACGTGGAGAAGCAGGCATCCAATGGTGTCTTGGTATGAGGCTGGGCCCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560028.1
CDS CCA 72 bp CTTCCTAATAGTGCACTTTCAGGCACTGGGGCGAACTaGTTCTTGAACCCTACCATGCACCTCCGTACCTTC +
Preference number: 6 (lower is better)
Translates to: LPNSALSGTGAN*FLNPTMHLRTF
Trigger: GAAGGTACGGAGGTGCATGGTAGGGTTCAAGAACCAGTTCGCCCCAGTGCCTGAAAGTGCACTATTAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559761.5
CDS CAA 72 bp TTCTTGCTGTGGATGATGATGACGTCAGTGGCCTCCTaGCAGGTGAAACGGACGGTGCTGGAGCCCTTAAAA +
Preference number: 6 (lower is better)
Translates to: FLLWMMMTSVAS*QVKRTVLEPLK
Trigger: TTTTAAGGGCTCCAGCACCGTCCGTTTCACCTGCAAGGAGGCCACTGACGTCATCATCATCCACAGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp GGCATGTACTGTCTCTCTTCAATCAGGAAGAGGGTGTaGTTCAGCGCCAGAGTGACAGGGACCTTATGGGCA +
Preference number: 6 (lower is better)
Translates to: GMYCLSSIRKRV*FSARVTGTLWA
Trigger: TGCCCATAAGGTCCCTGTCACTCTGGCGCTGAACAACACCCTCTTCCTGATTGAAGAGAGACAGTACATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300060.7
ENST00000558177.5
ENST00000559761.5
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp ACAAAGTCCCAGACCAGACCTTGCCCAATGACGTTGTaGGTAATGCTGATGATGGTAGAGGTGGCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: TKSQTRPCPMTL*VMLMMVEVASC
Trigger: GCAGGACGCCACCTCTACCATCATCAGCATTACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGACTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp TGGACAAAGTCCCAGACCAGACCTTGCCCAATGACGTaGTTGGTAATGCTGATGATGGTAGAGGTGGCGTCC +
Preference number: 6 (lower is better)
Translates to: WTKSQTRPCPMT*LVMLMMVEVAS
Trigger: GGACGCCACCTCTACCATCATCAGCATTACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGACTTTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 72 bp GGGTGGATCGGGTTATTATTGGGGTTCTCCATCCACTaGTTGAAAAGGCCAGAGACCATCTCCTCACACTCT +
Preference number: 6 (lower is better)
Translates to: GWIGLLLGFSIH*LKRPETISSHS
Trigger: AGAGTGTGAGGAGATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAACCCCAATAATAACCCGATCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp TCACTGACAATGAAGGCCAGCAAGTACGTGGACATCTaGGGCGTGGTGTGGAACTCAGTGACATTCCAGTTG +
Preference number: 6 (lower is better)
Translates to: SLTMKASKYVDI*GVVWNSVTFQL
Trigger: CAACTGGAATGTCACTGAGTTCCACACCACGCCCAAGATGTCCACGTACTTGCTGGCCTTCATTGTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000559874.2
ENST00000560028.1
ENST00000560137.2
ENST00000679248.1
CDS TCA 72 bp GGATCGGGTTATTATTGGGGTTCTCCATCCACTGCTTaGAAAGGCCAGAGACCATCTCCTCACACTCTGGAA +
Preference number: 6 (lower is better)
Translates to: GSGYYWGSPSTA*KGQRPSPHTLE
Trigger: TTCCAGAGTGTGAGGAGATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAACCCCAATAATAACCCGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CAA 72 bp TGGATCGGGTTATTATTGGGGTTCTCCATCCACTGCTaGAAAAGGCCAGAGACCATCTCCTCACACTCTGGA +
Preference number: 6 (lower is better)
Translates to: WIGLLLGFSIHC*KRPETISSHSG
Trigger: TCCAGAGTGTGAGGAGATGGTCTCTGGCCTTTTCAAGCAGTGGATGGAGAACCCCAATAATAACCCGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS GCA 72 bp TTCCAGTTGCTCTGGACAAAGTCCCAGACCAGACCTTaGCCAATGACGTTGTTGGTAATGCTGATGATGGTA +
Preference number: 6 (lower is better)
Translates to: FQLLWTKSQTRP*PMTLLVMLMMV
Trigger: TACCATCATCAGCATTACCAACAACGTCATTGGGCAAGGTCTGGTCTGGGACTTTGTCCAGAGCAACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1
CDS CCA 72 bp GGCATTAACCTCGCTGTACTGGTCCATCAGGTTTTCTaGGATCTCCCTCCAGTTGTTGGTATTATTTCTGAA +
Preference number: 6 (lower is better)
Translates to: GINLAVLVHQVF*DLPPVVGIISE
Trigger: TTCAGAAATAATACCAACAACTGGAGGGAGATCCCAGAAAACCTGATGGACCAGTACAGCGAGGTTAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300060.7
ENST00000558740.1
ENST00000559874.2
ENST00000560137.2
ENST00000679248.1