RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANO8 (Homo sapiens)

Ensembl gene IDs: ENSG00000074855

Ensembl transcript IDs: ENST00000159087.7, ENST00000597643.5, ENST00000600711.1, ENST00000630631.1

Found 480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCAGCCAGGGCCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTaGTGCCACTGCTGGGGGTCCCATCTGGCCGGGCCTGCCCGCCCG +
Preference number: 1 (lower is better)
Translates to: PQPGPRPPAHSSEPG*CHCWGSHLAGPARP
Trigger: CGGGCGGGCAGGCCCGGCCAGATGGGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCCTGGCTGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp CCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGTCCCATCTaGCCGGGCCTGCCCGCCCGCCCCGTTGGACCCAGGCTCAGCCCG +
Preference number: 1 (lower is better)
Translates to: PTPLNPAAATAGGPI*PGLPARPVGPRLSP
Trigger: CGGGCTGAGCCTGGGTCCAACGGGGCGGGCGGGCAGGCCCGGCCAGATGGGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTaGGGGTCCCATCTGGCCGGGCCTGCCCGCCCGCCCCGTTGGACC +
Preference number: 1 (lower is better)
Translates to: PRPPAHSSEPGCCHC*GSHLAGPARPPRWT
Trigger: GGTCCAACGGGGCGGGCGGGCAGGCCCGGCCAGATGGGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp CGCAGGCCCAGCTCGCCGCGGCCCAGGCGCCGGTACAGGTGCGGCTaGAGGACCTCGCGCACGTTCTGGAGGAACTGGCGGGTGATCAGC +
Preference number: 1 (lower is better)
Translates to: RRPSSPRPRRRYRCG*RTSRTFWRNWRVIS
Trigger: GCTGATCACCCGCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCCTGGGCCGCGGCGAGCTGGGCCTGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp GCCGGGCCTGCCCGCCCGCCCCGTTGGACCCAGGCTCAGCCCGGGTaGCACCAAAGGGGAAGAGCTTGCCAGCATGGAAGGCTTTGGGCG +
Preference number: 1 (lower is better)
Translates to: AGPARPPRWTQAQPG*HQRGRACQHGRLWA
Trigger: CGCCCAAAGCCTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGGGTCCAACGGGGCGGGCGGGCAGGCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp GGCGCTTGGGCCGTTCAGGCCCGTGGCCACCCGCAGTGCTGCCCTTaGCCTTGGCAGAGGCCTTCTCGGAGGAGGTGGCAGGGTCCAGCC +
Preference number: 1 (lower is better)
Translates to: GAWAVQARGHPQCCP*PWQRPSRRRWQGPA
Trigger: GGCTGGACCCTGCCACCTCCTCCGAGAAGGCCTCTGCCAAGGCCAAGGGCAGCACTGCGGGTGGCCACGGGCCTGAACGGCCCAAGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp CTCGCCTCCTCTCGGCCACCAGAATCATGCTCCCGCCGGGCATGGTaGTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCGCCTGCGC +
Preference number: 1 (lower is better)
Translates to: LASSRPPESCSRRAW*SAWRCRSSSSRRLR
Trigger: GCGCAGGCGGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGCATGATTCTGGTGGCCGAGAGGAGGCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp ACCCTGGGCGCTTGGGCCGTTCAGGCCCGTGGCCACCCGCAGTGCTaGCCTTGGCCTTGGCAGAGGCCTTCTCGGAGGAGGTGGCAGGGT +
Preference number: 1 (lower is better)
Translates to: TLGAWAVQARGHPQC*PWPWQRPSRRRWQG
Trigger: ACCCTGCCACCTCCTCCGAGAAGGCCTCTGCCAAGGCCAAGGGCAGCACTGCGGGTGGCCACGGGCCTGAACGGCCCAAGCGCCCAGGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp GCCCTCGCCTCCTCTCGGCCACCAGAATCATGCTCCCGCCGGGCATaGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCGCCTG +
Preference number: 1 (lower is better)
Translates to: ALASSRPPESCSRRA*CSAWRCRSSSSRRL
Trigger: CAGGCGGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGCATGATTCTGGTGGCCGAGAGGAGGCGAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp GGGATCGGGGGACTCACCCTCCCTGGGCGCCCCGCCGGAGCACCGTaGCCAGACACACGCCGAATCCGGTTCCTAACTCCGCTGCTTTGG +
Preference number: 1 (lower is better)
Translates to: GIGGLTLPGRPAGAP*PDTRRIRFLTPLLW
Trigger: CCAAAGCAGCGGAGTTAGGAACCGGATTCGGCGTGTGTCTGGGCACGGTGCTCCGGCGGGGCGCCCAGGGAGGGTGAGTCCCCCGATCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp AGCCCAGAGCCCTCGGCCCTCGCCTCCTCTCGGCCACCAGAATCATaGTCCCGCCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: SPEPSALASSRPPES*SRRAWCSAWRCRSS
Trigger: GGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGCATGATTCTGGTGGCCGAGAGGAGGCGAGGGCCGAGGGCTCTGGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp CCCAGGCGCCGGTACAGGTGCGGCTGCAGGACCTCGCGCACGTTCTaGAGGAACTGGCGGGTGATCAGCAGCGTGGCCAGCATCTGGGGG +
Preference number: 1 (lower is better)
Translates to: PRRRYRCGCRTSRTF*RNWRVISSVASIWG
Trigger: CCCCCAGATGCTGGCCACGCTGCTGATCACCCGCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp AAGACGACCGGTTCTGCCGTCTCTGCCTACGGGTCGAATCGCTGTTaGAGCCGGGTTCCGGGTCCGGGCCCCCGTCGGGCCCCTGGTCTC +
Preference number: 1 (lower is better)
Translates to: KTTGSAVSAYGSNRC*SRVPGPGPRRAPGL
Trigger: GAGACCAGGGGCCCGACGGGGGCCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCGTAGGCAGAGACGGCAGAACCGGTCGTCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp GAGGAGCAGAGCGAAGTGCTCGAGCACTACCACCGACACGATGGCTaGCTCCGGGCTCAGCCAGGGGAAGAGGCGCTGCAGCTGCCCGCA +
Preference number: 1 (lower is better)
Translates to: EEQSEVLEHYHRHDG*LRAQPGEEALQLPA
Trigger: TGCGGGCAGCTGCAGCGCCTCTTCCCCTGGCTGAGCCCGGAGGCAGCCATCGTGTCGGTGGTAGTGCTCGAGCACTTCGCTCTGCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp CCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATGGAAGGCTTTaGGCGGTGAGTGGCTGCGCTCAGAGTCCCGCCGGGTCTCGGGTG +
Preference number: 1 (lower is better)
Translates to: PGCHQRGRACQHGRL*AVSGCAQSPAGSRV
Trigger: CACCCGAGACCCGGCGGGACTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp CCAGGCTCAGCCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATaGAAGGCTTTGGGCGGTGAGTGGCTGCGCTCAGAGTCCCGCCGG +
Preference number: 1 (lower is better)
Translates to: PGSARVPPKGKSLPA*KALGGEWLRSESRR
Trigger: CCGGCGGGACTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp TCCTCCTCCGGCGGGTCAATCCAAGACGACCGGTTCTGCCGTCTCTaGCTACGGGTCGAATCGCTGTTGGAGCCGGGTTCCGGGTCCGGG +
Preference number: 1 (lower is better)
Translates to: SSSGGSIQDDRFCRL*LRVESLLEPGSGSG
Trigger: CCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCGTAGGCAGAGACGGCAGAACCGGTCGTCTTGGATTGACCCGCCGGAGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp ATGGCCTCCATCACCTTCTGCCACTGGCCGATGCTTTCCACGCGCTaGCCGAAGGGCCGCTGCAGCCCGGTGCACAGCTTGAAGGCGTCG +
Preference number: 1 (lower is better)
Translates to: MASITFCHWPMLSTR*PKGRCSPVHSLKAS
Trigger: CGACGCCTTCAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGGTGATGGAGGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp TTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTaGAGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGGATCTCAATG +
Preference number: 1 (lower is better)
Translates to: FCHWPMLSTRWPKGR*SPVHSLKASLRISM
Trigger: CATTGAGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp GATCTGCTTCAACTTCATGACGTTGTTGGGTGCCAGCAGGGACCCTaGGCGCTTGGGCCGTTCAGGCCCGTGGCCACCCGCAGTGCTGCC +
Preference number: 1 (lower is better)
Translates to: DLLQLHDVVGCQQGP*ALGPFRPVATRSAA
Trigger: GGCAGCACTGCGGGTGGCCACGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCATGAAGTTGAAGCAGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp GGCGAGTGTTCCTCCTCCGGCGGGTCAATCCAAGACGACCGGTTCTaGCGTCTCTGCCTACGGGTCGAATCGCTGTTGGAGCCGGGTTCC +
Preference number: 1 (lower is better)
Translates to: GECSSSGGSIQDDRF*RLCLRVESLLEPGS
Trigger: GGAACCCGGCTCCAACAGCGATTCGACCCGTAGGCAGAGACGGCAGAACCGGTCGTCTTGGATTGACCCGCCGGAGGAGGAACACTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp GCCCTGCAGTGGGATGATCTGCTTCAACTTCATGACGTTGTTGGGTaGCAGCAGGGACCCTGGGCGCTTGGGCCGTTCAGGCCCGTGGCC +
Preference number: 1 (lower is better)
Translates to: ALQWDDLLQLHDVVG*QQGPWALGPFRPVA
Trigger: GGCCACGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCATGAAGTTGAAGCAGATCATCCCACTGCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp CGTTGGACCCAGGCTCAGCCCGGGTGCCACCAAAGGGGAAGAGCTTaGCAGCATGGAAGGCTTTGGGCGGTGAGTGGCTGCGCTCAGAGT +
Preference number: 1 (lower is better)
Translates to: RWTQAQPGCHQRGRA*QHGRLWAVSGCAQS
Trigger: ACTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGGGTCCAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp CCGTGCCCAGACACACGCCGAATCCGGTTCCTAACTCCGCTGCTTTaGACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAATA +
Preference number: 1 (lower is better)
Translates to: PCPDTRRIRFLTPLL*TRLDARPPALSHKI
Trigger: TATTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAGTTAGGAACCGGATTCGGCGTGTGTCTGGGCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp CCAAAGGGGAAGAGCTTGCCAGCATGGAAGGCTTTGGGCGGTGAGTaGCTGCGCTCAGAGTCCCGCCGGGTCTCGGGTGACTTGAGGAAC +
Preference number: 1 (lower is better)
Translates to: PKGKSLPAWKALGGE*LRSESRRVSGDLRN
Trigger: GTTCCTCAAGTCACCCGAGACCCGGCGGGACTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTTCCCCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp GCCATTTCCTCGGCCACCCAGCCCGGGATATCGGGGATGGCCACGTaGATGAGGTACTTGAGGAGCAGAGCGAAGTGCTCGAGCACTACC +
Preference number: 1 (lower is better)
Translates to: AISSATQPGISGMAT*MRYLRSRAKCSSTT
Trigger: GGTAGTGCTCGAGCACTTCGCTCTGCTCCTCAAGTACCTCATCCACGTGGCCATCCCCGATATCCCGGGCTGGGTGGCCGAGGAAATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp TCCTCGTACTTCTTCATACAGCTCTCCAGCTCTGCCTGGGTGAGCTaGGGCGAGTGTTCCTCCTCCGGCGGGTCAATCCAAGACGACCGG +
Preference number: 1 (lower is better)
Translates to: SSYFFIQLSSSAWVS*GECSSSGGSIQDDR
Trigger: CCGGTCGTCTTGGATTGACCCGCCGGAGGAGGAACACTCGCCCCAGCTCACCCAGGCAGAGCTGGAGAGCTGTATGAAGAAGTACGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR TCA 90 bp ACGTGTCCTCGTACTTCTTCATACAGCTCTCCAGCTCTGCCTGGGTaGGCTGGGGCGAGTGTTCCTCCTCCGGCGGGTCAATCCAAGACG +
Preference number: 1 (lower is better)
Translates to: TCPRTSSYSSPALPG*AGASVPPPAGQSKT
Trigger: CGTCTTGGATTGACCCGCCGGAGGAGGAACACTCGCCCCAGCTCACCCAGGCAGAGCTGGAGAGCTGTATGAAGAAGTACGAGGACACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR TCA 90 bp GGAAGAGGCGCTGCAGCTGCCCGCACTGGCCGATTAAGTAGCAGTTaGCCACAATCGCTAGGACACCCATGGCCTCCATCACCTTCTGCC +
Preference number: 1 (lower is better)
Translates to: GRGAAAARTGRLSSS*PQSLGHPWPPSPSA
Trigger: GGCAGAAGGTGATGGAGGCCATGGGTGTCCTAGCGATTGTGGTCAACTGCTACTTAATCGGCCAGTGCGGGCAGCTGCAGCGCCTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp GTCCTGGAACGTGTCCTCGTACTTCTTCATACAGCTCTCCAGCTCTaGCTGGGTGAGCTGGGGCGAGTGTTCCTCCTCCGGCGGGTCAAT +
Preference number: 1 (lower is better)
Translates to: VLERVLVLLHTALQL*LGELGRVFLLRRVN
Trigger: ATTGACCCGCCGGAGGAGGAACACTCGCCCCAGCTCACCCAGGCAGAGCTGGAGAGCTGTATGAAGAAGTACGAGGACACGTTCCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 90 bp TGGAACGTGTCCTCGTACTTCTTCATACAGCTCTCCAGCTCTGCCTaGGTGAGCTGGGGCGAGTGTTCCTCCTCCGGCGGGTCAATCCAA +
Preference number: 1 (lower is better)
Translates to: WNVSSYFFIQLSSSA*VSWGECSSSGGSIQ
Trigger: TTGGATTGACCCGCCGGAGGAGGAACACTCGCCCCAGCTCACCCAGGCAGAGCTGGAGAGCTGTATGAAGAAGTACGAGGACACGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp GATGTGGCCCCTGACGAGAGGAATTTGCCCTGCAGTGGGATGATCTaGTTCAACTTCATGACGTTGTTGGGTGCCAGCAGGGACCCTGGG +
Preference number: 1 (lower is better)
Translates to: DVAPDERNLPCSGMI*FNFMTLLGASRDPG
Trigger: CCCAGGGTCCCTGCTGGCACCCAACAACGTCATGAAGTTGAAGCAGATCATCCCACTGCAGGGCAAATTCCTCTCGTCAGGGGCCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 90 bp GCAGCAGCCAGTGAGGATGTGGCCCCTGACGAGAGGAATTTGCCCTaGAGTGGGATGATCTGCTTCAACTTCATGACGTTGTTGGGTGCC +
Preference number: 1 (lower is better)
Translates to: AAASEDVAPDERNLP*SGMICFNFMTLLGA
Trigger: GGCACCCAACAACGTCATGAAGTTGAAGCAGATCATCCCACTGCAGGGCAAATTCCTCTCGTCAGGGGCCACATCCTCACTGGCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR GCA 90 bp CCCTCGCCCCCGGCCCGGCGGAACAAGATGGCCGGGGGCTCCCGTTCAGGGCTGCCCGCCGGAGCACCGTaGCCAGACACACGCCGAATC +
Preference number: 2 (lower is better)
Translates to: PSPPARRNKMAGGSRSGLPAGAP*PDTRRI
Trigger: GATTCGGCGTGTGTCTGGGCACGGTGCTCCGGCGGG...CAGCCCTGAACGGGAGCCCCCGGCCATCTTGTTCCGCCGGGCCGGGGGCGAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR GCA 90 bp GCGGGGCGCAGGGCGCCGGAGGCTCAGGAGGCCAAGCAGGGCTCGGGCCAGCTCCGGTACAGGTGCGGCTaGAGGACCTCGCGCACGTTC +
Preference number: 2 (lower is better)
Translates to: AGRRAPEAQEAKQGSGQLRYRCG*RTSRTF
Trigger: GAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCG...GAGCTGGCCCGAGCCCTGCTTGGCCTCCTGAGCCTCCGGCGCCCTGCGCCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp GCGGGGCGCAGGGCGCCGGAGGCTCAGGAGGCCAAGCAGGGCTCGGGCCAGCTCGGCACCGACCAATACTaGGGGCCCTCGGGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: AGRRAPEAQEAKQGSGQLGTDQY*GPSGAE
Trigger: TTCAGCCCCCGAGGGCCCCCAGTATTGGTCGGTGCC...GAGCTGGCCCGAGCCCTGCTTGGCCTCCTGAGCCTCCGGCGCCCTGCGCCCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR GCA 90 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGTCCGCTCCCGTTCAGGGCTaGCGGGAGCCCCCTCCGCCT +
Preference number: 2 (lower is better)
Translates to: PRPPAHSSEPGCCHCWGSAPVQG*REPPPP
Trigger: AGGCGGAGGGGGCTCCCGGCAGCCCTGAACGGGAGC...GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp CCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCGCCTGCGCTCCTCCTTGCCCCCTaGAGGCCCGTCCCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: PGMVLCMALSLLLLPPPALLLAP*RPVPLL
Trigger: GAGGAGGGGGACGGGCCTCCAGGGGGCAAGGAGGAG...CGCAGGCGGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp CGCCTCGTCGTCCTCCTCGGCCAGGGTGAACACTCCCGGCTCCAGCCCCTTCTCAAGGAGAGAGGCGCGTaGGGGGCAAGCGGGGCGCCG +
Preference number: 2 (lower is better)
Translates to: RLVVLLGQGEHSRLQPLLKERGA*GASGAP
Trigger: CGGCGCCCCGCTTGCCCCCCACGCGCCTCTCTCCTT...GAGAAGGGGCTGGAGCCGGGAGTGTTCACCCTGGCCGAGGAGGACGACGAGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR GCA 90 bp CCAGGGCCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGCACCGACACGATGGCTaGCTCCGGGCTCAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: PGPRPPAHSSEPGCCHCWHRHDG*LRAQPG
Trigger: CCCTGGCTGAGCCCGGAGGCAGCCATCGTGTCGGTG...CCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp GCTCCCGCCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCATGCTTTCCACGCGCTaGCCGAAGGGCCGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: APAGHGALHGAVAPPPPAMLSTR*PKGRCS
Trigger: GCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCAT...GGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 90 bp CAAGACGACCGGTTCTGCCGTCTCTGCCTACGGGTCGAATCGCTGTaGGAGCCGGGTTCCGGGTCCGGGCCCCCGTCGGGCCCCTGGTCT +
Preference number: 2 (lower is better)
Translates to: QDDRFCRLCLRVESL*EPGSGSGPPSGPWS
Trigger: AGACCAGGGGCCCGACGGGGGCCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCGTAGGCAGAGACGGCAGAACCGGTCGTCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGTCCGGGTCGAATCGCTGTTaGAGCCGGGTTCCGGGTCCG +
Preference number: 2 (lower is better)
Translates to: PRPPAHSSEPGCCHCWGSGSNRC*SRVPGP
Trigger: CGGACCCGGAACCCGGCTCCAACAGCGATTCGACCC...GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp CCAGGGCCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGCTTTGGGCGGTGAGTaGCTGCGCTCAGAGTCCCGC +
Preference number: 2 (lower is better)
Translates to: PGPRPPAHSSEPGCCHCWALGGE*LRSESR
Trigger: GCGGGACTCTGAGCGCAGCCACTCACCGCCCAAAGC...CCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR GCA 90 bp ATCACCTTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTGCCCTCGTCCTCCTCCTTaGCCCCTGGAGGCCCGTCCC +
Preference number: 2 (lower is better)
Translates to: ITFCHWPMLSTRWPKGRCPRPPP*PLEARP
Trigger: GGGACGGGCCTCCAGGGGGCAAGGAGGAGGACGAGG...GCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGGTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 90 bp GCCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATGGAAGGCTTaGGGCGGTGAGTGGCTGCGCTCAGAGTCCCGCCGGGTCTCGGGT +
Preference number: 2 (lower is better)
Translates to: ARVPPKGKSLPAWKA*GGEWLRSESRRVSG
Trigger: ACCCGAGACCCGGCGGGACTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR GCA 90 bp GACCCAGGCTCAGCCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATGGAAGAGGCGCCGGTACAGGTaGGGCTGCAGGACCTCGCGC +
Preference number: 2 (lower is better)
Translates to: DPGSARVPPKGKSLPAWKRRRYR*GCRTSR
Trigger: GCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCCT...CTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp CGCCTCGTCGTCCTCCTCGGCCAGGGTGAACACTCCCGGCTCCAGCCCCTTCTCCTAACTCCGCTGCTTTaGACGCGCCTCGACGCGAGG +
Preference number: 2 (lower is better)
Translates to: RLVVLLGQGEHSRLQPLLLTPLL*TRLDAR
Trigger: CCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAGTTAG...GAGAAGGGGCTGGAGCCGGGAGTGTTCACCCTGGCCGAGGAGGACGACGAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 90 bp TTCAACTTCATGACGTTGTTGGGTGCCAGCAGGGACCCTGGGCGCTaGGGCCGTTCAGGCCCGTGGCCACCCGCAGTGCTGCCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: FNFMTLLGASRDPGR*GRSGPWPPAVLPLA
Trigger: GGCCAAGGGCAGCACTGCGGGTGGCCACGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCATGAAGTTGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 90 bp GGCGGTGAGTGGCTGCGCTCAGAGTCCCGCCGGGTCTCGGGTGACTaGAGGAACTTGAAGCTGAGGAAGGCAGGCAGGCGGGTGTCGCTG +
Preference number: 2 (lower is better)
Translates to: GGEWLRSESRRVSGD*RNLKLRKAGRRVSL
Trigger: CAGCGACACCCGCCTGCCTGCCTTCCTCAGCTTCAAGTTCCTCAAGTCACCCGAGACCCGGCGGGACTCTGAGCGCAGCCACTCACCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 90 bp CTTTCCACGCGCTGGCCGAAGGGCCGCTGCAGCCCGGTGCACAGCTaGAAGGCGTCGCTGCGGATCTCAATGAGGTTGTTGACCAGGGCG +
Preference number: 2 (lower is better)
Translates to: LSTRWPKGRCSPVHS*KASLRISMRLLTRA
Trigger: CGCCCTGGTCAACAACCTCATTGAGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 90 bp TGGCTGCGCTCAGAGTCCCGCCGGGTCTCGGGTGACTTGAGGAACTaGAAGCTGAGGAAGGCAGGCAGGCGGGTGTCGCTGCCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: WLRSESRRVSGDLRN*KLRKAGRRVSLPVG
Trigger: ACCCACAGGCAGCGACACCCGCCTGCCTGCCTTCCTCAGCTTCAAGTTCCTCAAGTCACCCGAGACCCGGCGGGACTCTGAGCGCAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 90 bp CCGTTGGACCCAGGCTCAGCCCGGGTGCCACCAAAGGGGAAGAGCTaGCCAGCATGGAAGGCTTTGGGCGGTGAGTGGCTGCGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: PLDPGSARVPPKGKS*PAWKALGGEWLRSE
Trigger: CTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGGGTCCAACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp CGCCTCGTCGTCCTCCTCGGCCAGGGTGAACACTCCCGGCTCCAGCCCCTTCTCACGTTCTGGAGGAACTaGCGGGTGATCAGCAGCGTG +
Preference number: 2 (lower is better)
Translates to: RLVVLLGQGEHSRLQPLLTFWRN*RVISSV
Trigger: CACGCTGCTGATCACCCGCCAGTTCCTCCAGAACGT...GAGAAGGGGCTGGAGCCGGGAGTGTTCACCCTGGCCGAGGAGGACGACGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 90 bp ACCGTGCCCAGACACACGCCGAATCCGGTTCCTAACTCCGCTGCTTaGGACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAAT +
Preference number: 2 (lower is better)
Translates to: TVPRHTPNPVPNSAA*DAPRREAPSAQPQN
Trigger: ATTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAGTTAGGAACCGGATTCGGCGTGTGTCTGGGCACGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR TCA 90 bp CAGCCCGGGATATCGGGGATGGCCACGTGGATGAGGTACTTGAGGAGCAGAGCGGGAGGAACTGGCGGGTaGTCAGCAGCGTGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: QPGISGMATWMRYLRSRAGGTGG*SAAWPA
Trigger: TGCTGGCCACGCTGCTGATCACCCGCCAGTTCCTCC...CGCTCTGCTCCTCAAGTACCTCATCCACGTGGCCATCCCCGATATCCCGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp ATGACGTTGTTGGGTGCCAGCAGGGACCCTGGGCGCTTGGGCCGTTCAGGCCCGATCACCTTCTGCCACTaGCCGATGCTTTCCACGCGC +
Preference number: 2 (lower is better)
Translates to: MTLLGASRDPGRLGRSGPITFCH*PMLSTR
Trigger: GCGCGTGGAAAGCATCGGCCAGTGGCAGAAGGTGAT...CGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR GCA 90 bp AATCATGCTCCCGCCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCGGTTCTGCCGTCTCTaGCTACGGGTCGAATCGCTG +
Preference number: 2 (lower is better)
Translates to: NHAPAGHGALHGAVAPPPRFCRL*LRVESL
Trigger: CAGCGATTCGACCCGTAGGCAGAGACGGCAGAACCG...AGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGCATGATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR TCA 90 bp AGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGGATCTCAATGAGGTTGTTGACCCGCGCTCAGCGAAGCTaGCCTTCTTCAGCCGGAGCC +
Preference number: 2 (lower is better)
Translates to: SPVHSLKASLRISMRLLTRAQRS*PSSAGA
Trigger: GGCTCCGGCTGAAGAAGGTCAGCTTCGCTGAGCGCG...GGTCAACAACCTCATTGAGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 90 bp AATTTGCCCTGCAGTGGGATGATCTGCTTCAACTTCATGACGTTGTaGGGTGCCAGCAGGGACCCTGGGCGCTTGGGCCGTTCAGGCCCG +
Preference number: 2 (lower is better)
Translates to: NLPCSGMICFNFMTL*GASRDPGRLGRSGP
Trigger: CGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCATGAAGTTGAAGCAGATCATCCCACTGCAGGGCAAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp AGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGGATCTCAATGAGGTTGTTGACCCCACAAAATACAGCCTaGCACGCGCAGCGCTCCTCG +
Preference number: 2 (lower is better)
Translates to: SPVHSLKASLRISMRLLTPQNTA*HAQRSS
Trigger: CGAGGAGCGCTGCGCGTGCCAGGCTGTATTTTGTGG...GGTCAACAACCTCATTGAGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 90 bp AGGAATTTGCCCTGCAGTGGGATGATCTGCTTCAACTTCATGACGTaGTTGGGTGCCAGCAGGGACCCTGGGCGCTTGGGCCGTTCAGGC +
Preference number: 2 (lower is better)
Translates to: RNLPCSGMICFNFMT*LGASRDPGRLGRSG
Trigger: GCCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCATGAAGTTGAAGCAGATCATCCCACTGCAGGGCAAATTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp CAGCCCGGGATATCGGGGATGGCCACGTGGATGAGGTACTTGAGGAGCAGAGCGAAGGAAAACGGCAGATaGGGGGCACCGACCAATACT +
Preference number: 2 (lower is better)
Translates to: QPGISGMATWMRYLRSRAKENGR*GAPTNT
Trigger: AGTATTGGTCGGTGCCCCCCATCTGCCGTTTTCCTT...CGCTCTGCTCCTCAAGTACCTCATCCACGTGGCCATCCCCGATATCCCGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp ACTGCACGAACATCTCCTGGTAGTCCTGGAACGTGTCCTCGTACTTCTTCATACCCCGGCGGAACAAGATaGCCGGGGGCTCCCGTTCAG +
Preference number: 2 (lower is better)
Translates to: TARTSPGSPGTCPRTSSYPGGTR*PGAPVQ
Trigger: CTGAACGGGAGCCCCCGGCCATCTTGTTCCGCCGGG...GTATGAAGAAGTACGAGGACACGTTCCAGGACTACCAGGAGATGTTCGTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 90 bp GCCCCTGCAGCAGCCAGTGAGGATGTGGCCCCTGACGAGAGGAATTaGCCCTGCAGTGGGATGATCTGCTTCAACTTCATGACGTTGTTG +
Preference number: 2 (lower is better)
Translates to: APAAASEDVAPDERN*PCSGMICFNFMTLL
Trigger: CAACAACGTCATGAAGTTGAAGCAGATCATCCCACTGCAGGGCAAATTCCTCTCGTCAGGGGCCACATCCTCACTGGCTGCTGCAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR GCA 90 bp ACTGCACGAACATCTCCTGGTAGTCCTGGAACGTGTCCTCGTACTTCTTCATACCAAGACGACCGGTTCTaGCGTCTCTGCCTACGGGTC +
Preference number: 2 (lower is better)
Translates to: TARTSPGSPGTCPRTSSYQDDRF*RLCLRV
Trigger: GACCCGTAGGCAGAGACGGCAGAACCGGTCGTCTTG...GTATGAAGAAGTACGAGGACACGTTCCAGGACTACCAGGAGATGTTCGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp ATCACCTTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTGCTTTCTGTTGGATTTGTaGGTTTCCTTTCGTTTGGAA +
Preference number: 2 (lower is better)
Translates to: ITFCHWPMLSTRWPKGRCFLLDL*VSFRLE
Trigger: TTCCAAACGAAAGGAAACCCACAAATCCAACAGAAA...GCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGGCACCGACCAATACTaGGGGCCCTCGGGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKGTDQY*GPSGAE
Trigger: TTCAGCCCCCGAGGGCCCCCAGTATTGGTCGGTGCC...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATAAGGAAAACGGCAGATaGGGGGCACCGACCAATACT +
Preference number: 2 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDKENGR*GAPTNT
Trigger: AGTATTGGTCGGTGCCCCCCATCTGCCGTTTTCCTT...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCGACCGGCCGCCCCTGTaGATGACTGATATTGCATAT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFDRPPL*MTDIAY
Trigger: ATATGCAATATCAGTCATTCACAGGGGCGGCCGGTC...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR-3UTR TCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGACCGGCCGCCCCTGTaGATGACTGATATTGCATAT +
Preference number: 2 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKDRPPL*MTDIAY
Trigger: ATATGCAATATCAGTCATTCACAGGGGCGGCCGGTC...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR CAA 90 bp CTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTaGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAACGGCAGAT +
Preference number: 2 (lower is better)
Translates to: LFCVCVCVCVCVCFL*DLWVSFRLERKTAD
Trigger: ATCTGCCGTTTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGCCGCCCCTGTGAATaGCTGATATTGCATATGAGA +
Preference number: 2 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKGRPCE*LILHMR
Trigger: TCTCATATGCAATATCAGTCATTCACAGGGGCGGCC...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR-3UTR TCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAGGCCGCCCCTGTGAATaGCTGATATTGCATATGAGA +
Preference number: 2 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKGRPCE*LILHMR
Trigger: TCTCATATGCAATATCAGTCATTCACAGGGGCGGCC...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR-3UTR CCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTaGAAAGGAAAACGGCAGATG +
Preference number: 2 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICGFPFV*KGKRQM
Trigger: CATCTGCCGTTTTCCTTTCCAAACGAAAGGAAACCC...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR GCA 72 bp CTGCTGCCACTGCTGGGGGTCCCATCTGGCCGGGCCTaGCCGCCCGCCCCGTTGGACCCAGGCTCAGCCCGG +
Preference number: 3 (lower is better)
Translates to: LLPLLGVPSGRA*PPAPLDPGSAR
Trigger: CCGGGCTGAGCCTGGGTCCAACGGGGCGGGCGGGCAGGCCCGGCCAGATGGGACCCCCAGCAGTGGCAGCAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp CCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTaGGGGTCCCATCTGGCCGGGCCTGCCCGCCCGCCC +
Preference number: 3 (lower is better)
Translates to: PAHSSEPGCCHC*GSHLAGPARPP
Trigger: GGGCGGGCGGGCAGGCCCGGCCAGATGGGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp CTGAACCCGGCTGCTGCCACTGCTGGGGGTCCCATCTaGCCGGGCCTGCCCGCCCGCCCCGTTGGACCCAGG +
Preference number: 3 (lower is better)
Translates to: LNPAAATAGGPI*PGLPARPVGPR
Trigger: CCTGGGTCCAACGGGGCGGGCGGGCAGGCCCGGCCAGATGGGACCCCCAGCAGTGGCAGCAGCCGGGTTCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp GGCGGAACAAGATGGCCGGGGGCTCCCGTTCAGGGCTaGCGGGAGCCCCCTCCGCCTCGTCGTCCTCCTCGG +
Preference number: 3 (lower is better)
Translates to: GGTRWPGAPVQG*REPPPPRRPPR
Trigger: CCGAGGAGGACGACGAGGCGGAGGGGGCTCCCGGCAGCCCTGAACGGGAGCCCCCGGCCATCTTGTTCCGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp AGCTCGCCGCGGCCCAGGCGCCGGTACAGGTGCGGCTaGAGGACCTCGCGCACGTTCTGGAGGAACTGGCGG +
Preference number: 3 (lower is better)
Translates to: SSPRPRRRYRCG*RTSRTFWRNWR
Trigger: CCGCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCCTGGGCCGCGGCGAGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp AGGCCCAGCTCGCCGCGGCCCAGGCGCCGGTACAGGTaGGGCTGCAGGACCTCGCGCACGTTCTGGAGGAAC +
Preference number: 3 (lower is better)
Translates to: RPSSPRPRRRYR*GCRTSRTFWRN
Trigger: GTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCCTGGGCCGCGGCGAGCTGGGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTaGCACTGCTGGGGGTCCCATCTGGCCGGGCCTGCC +
Preference number: 3 (lower is better)
Translates to: PRPPAHSSEPGC*HCWGSHLAGPA
Trigger: GGCAGGCCCGGCCAGATGGGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp GGGCCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTaGTGCCACTGCTGGGGGTCCCATCTGGCCGGGCCT +
Preference number: 3 (lower is better)
Translates to: GPRPPAHSSEPG*CHCWGSHLAGP
Trigger: AGGCCCGGCCAGATGGGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CAA 90 bp CCCTCGCCCCCGGCCCGGCGGAACAAGATGGCCGGGGGCTCCCGTTCAGGGCTGCCTAACTCCGCTGCTTaGGACGCGCCTCGACGCGAG +
Preference number: 3 (lower is better)
Translates to: PSPPARRNKMAGGSRSGLPNSAA*DAPRRE
Trigger: CTCGCGTCGAGGCGCGTCCAAAGCAGCGGAGTTAGG...CAGCCCTGAACGGGAGCCCCCGGCCATCTTGTTCCGCCGGGCCGGGGGCGAGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CAA 90 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGTCCAGGGACCCTGGGCGCTaGGGCCGTTCAGGCCCGTGG +
Preference number: 3 (lower is better)
Translates to: PRPPAHSSEPGCCHCWGSRDPGR*GRSGPW
Trigger: CCACGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCT...GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp GGTTCTGCCGTCTCTGCCTACGGGTCGAATCGCTGTTaGAGCCGGGTTCCGGGTCCGGGCCCCCGTCGGGCC +
Preference number: 3 (lower is better)
Translates to: GSAVSAYGSNRC*SRVPGPGPRRA
Trigger: GGCCCGACGGGGGCCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCGTAGGCAGAGACGGCAGAACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp AGCAGGGACCCTGGGCGCTTGGGCCGTTCAGGCCCGTaGCCACCCGCAGTGCTGCCCTTGGCCTTGGCAGAG +
Preference number: 3 (lower is better)
Translates to: SRDPGRLGRSGP*PPAVLPLALAE
Trigger: CTCTGCCAAGGCCAAGGGCAGCACTGCGGGTGGCCACGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp GGACTCACCCTCCCTGGGCGCCCCGCCGGAGCACCGTaGCCAGACACACGCCGAATCCGGTTCCTAACTCCG +
Preference number: 3 (lower is better)
Translates to: GLTLPGRPAGAP*PDTRRIRFLTP
Trigger: CGGAGTTAGGAACCGGATTCGGCGTGTGTCTGGGCACGGTGCTCCGGCGGGGCGCCCAGGGAGGGTGAGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp TGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTaGAGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGG +
Preference number: 3 (lower is better)
Translates to: WPMLSTRWPKGR*SPVHSLKASLR
Trigger: CCGCAGCGACGCCTTCAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp CCAGAATCATGCTCCCGCCGGGCATGGTGCTCTGCATaGCGCTGTCGCTCCTCCTCCTCCCGCCGCCTGCGC +
Preference number: 3 (lower is better)
Translates to: PESCSRRAWCSA*RCRSSSSRRLR
Trigger: GCGCAGGCGGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGCATGATTCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp GCCGTTCAGGCCCGTGGCCACCCGCAGTGCTGCCCTTaGCCTTGGCAGAGGCCTTCTCGGAGGAGGTGGCAG +
Preference number: 3 (lower is better)
Translates to: AVQARGHPQCCP*PWQRPSRRRWQ
Trigger: CTGCCACCTCCTCCGAGAAGGCCTCTGCCAAGGCCAAGGGCAGCACTGCGGGTGGCCACGGGCCTGAACGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR TCA 72 bp TCCTCAGCCAGGGCCTCGTCCACCGGCCCACTCCTCTaGACCCGGCTGCTGCCACTGCTGGGGGTCCCATCT +
Preference number: 3 (lower is better)
Translates to: SSARASSTGPLL*TRLLPLLGVPS
Trigger: AGATGGGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCCTGGCTGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp CCCTCGGCCCTCGCCTCCTCTCGGCCACCAGAATCATaGTCCCGCCGGGCATGGTGCTCTGCATGGCGCTGT +
Preference number: 3 (lower is better)
Translates to: PSALASSRPPES*SRRAWCSAWRC
Trigger: ACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGCATGATTCTGGTGGCCGAGAGGAGGCGAGGGCCGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR TCA 72 bp GGGGAAGAGCTTGCCAGCATGGAAGGCTTTGGGCGGTaGGTGGCTGCGCTCAGAGTCCCGCCGGGTCTCGGG +
Preference number: 3 (lower is better)
Translates to: GEELASMEGFGR*VAALRVPPGLG
Trigger: CCCGAGACCCGGCGGGACTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp GACACACGCCGAATCCGGTTCCTAACTCCGCTGCTTTaGACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGC +
Preference number: 3 (lower is better)
Translates to: DTRRIRFLTPLL*TRLDARPPALS
Trigger: GCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAGTTAGGAACCGGATTCGGCGTGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp TGCGGCTGCAGGACCTCGCGCACGTTCTGGAGGAACTaGCGGGTGATCAGCAGCGTGGCCAGCATCTGGGGG +
Preference number: 3 (lower is better)
Translates to: CGCRTSRTFWRN*RVISSVASIWG
Trigger: CCCCCAGATGCTGGCCACGCTGCTGATCACCCGCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp CGGTACAGGTGCGGCTGCAGGACCTCGCGCACGTTCTaGAGGAACTGGCGGGTGATCAGCAGCGTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: RYRCGCRTSRTF*RNWRVISSVAS
Trigger: GCTGGCCACGCTGCTGATCACCCGCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp AGCGAAGTGCTCGAGCACTACCACCGACACGATGGCTaGCTCCGGGCTCAGCCAGGGGAAGAGGCGCTGCAG +
Preference number: 3 (lower is better)
Translates to: SEVLEHYHRHDG*LRAQPGEEALQ
Trigger: CTGCAGCGCCTCTTCCCCTGGCTGAGCCCGGAGGCAGCCATCGTGTCGGTGGTAGTGCTCGAGCACTTCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp ATCACCTTCTGCCACTGGCCGATGCTTTCCACGCGCTaGCCGAAGGGCCGCTGCAGCCCGGTGCACAGCTTG +
Preference number: 3 (lower is better)
Translates to: ITFCHWPMLSTR*PKGRCSPVHSL
Trigger: CAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGGTGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp GCAGAGCGAAGTGCTCGAGCACTACCACCGACACGATaGCTGCCTCCGGGCTCAGCCAGGGGAAGAGGCGCT +
Preference number: 3 (lower is better)
Translates to: AERSARALPPTR*LPPGSARGRGA
Trigger: AGCGCCTCTTCCCCTGGCTGAGCCCGGAGGCAGCCATCGTGTCGGTGGTAGTGCTCGAGCACTTCGCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp TCCTCTCGGCCACCAGAATCATGCTCCCGCCGGGCATaGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: SSRPPESCSRRA*CSAWRCRSSSS
Trigger: GGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGCATGATTCTGGTGGCCGAGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp AAGAGCTTGCCAGCATGGAAGGCTTTGGGCGGTGAGTaGCTGCGCTCAGAGTCCCGCCGGGTCTCGGGTGAC +
Preference number: 3 (lower is better)
Translates to: KSLPAWKALGGE*LRSESRRVSGD
Trigger: GTCACCCGAGACCCGGCGGGACTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp CACCAAAGGGGAAGAGCTTGCCAGCATGGAAGGCTTTaGGCGGTGAGTGGCTGCGCTCAGAGTCCCGCCGGG +
Preference number: 3 (lower is better)
Translates to: HQRGRACQHGRL*AVSGCAQSPAG
Trigger: CCCGGCGGGACTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTTCCCCTTTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp GCCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATaGAAGGCTTTGGGCGGTGAGTGGCTGCGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: ARVPPKGKSLPA*KALGGEWLRSE
Trigger: CTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp GGCGGGTCAATCCAAGACGACCGGTTCTGCCGTCTCTaGCTACGGGTCGAATCGCTGTTGGAGCCGGGTTCC +
Preference number: 3 (lower is better)
Translates to: GGSIQDDRFCRL*LRVESLLEPGS
Trigger: GGAACCCGGCTCCAACAGCGATTCGACCCGTAGGCAGAGACGGCAGAACCGGTCGTCTTGGATTGACCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp TCCTCCTCCGGCGGGTCAATCCAAGACGACCGGTTCTaGCGTCTCTGCCTACGGGTCGAATCGCTGTTGGAG +
Preference number: 3 (lower is better)
Translates to: SSSGGSIQDDRF*RLCLRVESLLE
Trigger: CTCCAACAGCGATTCGACCCGTAGGCAGAGACGGCAGAACCGGTCGTCTTGGATTGACCCGCCGGAGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CCA 72 bp TCCTCGTACTTCTTCATACAGCTCTCCAGCTCTGCCTaGGTGAGCTGGGGCGAGTGTTCCTCCTCCGGCGGG +
Preference number: 3 (lower is better)
Translates to: SSYFFIQLSSSA*VSWGECSSSGG
Trigger: CCCGCCGGAGGAGGAACACTCGCCCCAGCTCACCCAGGCAGAGCTGGAGAGCTGTATGAAGAAGTACGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR TCA 72 bp CGTACTTCTTCATACAGCTCTCCAGCTCTGCCTGGGTaGGCTGGGGCGAGTGTTCCTCCTCCGGCGGGTCAA +
Preference number: 3 (lower is better)
Translates to: RTSSYSSPALPG*AGASVPPPAGQ
Trigger: TTGACCCGCCGGAGGAGGAACACTCGCCCCAGCTCACCCAGGCAGAGCTGGAGAGCTGTATGAAGAAGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp CGTGTCCTCGTACTTCTTCATACAGCTCTCCAGCTCTaGCTGGGTGAGCTGGGGCGAGTGTTCCTCCTCCGG +
Preference number: 3 (lower is better)
Translates to: RVLVLLHTALQL*LGELGRVFLLR
Trigger: CCGGAGGAGGAACACTCGCCCCAGCTCACCCAGGCAGAGCTGGAGAGCTGTATGAAGAAGTACGAGGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CAA 90 bp GGCGCCGGTACAGGTGCGGCTGCAGGACCTCGCGCACGTTCTGGAGGAACTGGCTGGGTTTCCTTTCGTTaGGAAAGGAAAACGGCAGAT +
Preference number: 3 (lower is better)
Translates to: GAGTGAAAGPRARSGGTGWVSFR*ERKTAD
Trigger: ATCTGCCGTTTTCCTTTCCAAACGAAAGGAAACCCA...GCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp TGGGATGATCTGCTTCAACTTCATGACGTTGTTGGGTaGCAGCAGGGACCCTGGGCGCTTGGGCCGTTCAGG +
Preference number: 3 (lower is better)
Translates to: WDDLLQLHDVVG*QQGPWALGPFR
Trigger: CCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCATGAAGTTGAAGCAGATCATCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR TCA 72 bp GCTGCAGCTGCCCGCACTGGCCGATTAAGTAGCAGTTaGCCACAATCGCTAGGACACCCATGGCCTCCATCA +
Preference number: 3 (lower is better)
Translates to: AAAARTGRLSSS*PQSLGHPWPPS
Trigger: TGATGGAGGCCATGGGTGTCCTAGCGATTGTGGTCAACTGCTACTTAATCGGCCAGTGCGGGCAGCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp CCTGACGAGAGGAATTTGCCCTGCAGTGGGATGATCTaGTTCAACTTCATGACGTTGTTGGGTGCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: PDERNLPCSGMI*FNFMTLLGASR
Trigger: CCTGCTGGCACCCAACAACGTCATGAAGTTGAAGCAGATCATCCCACTGCAGGGCAAATTCCTCTCGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR GCA 72 bp AGTGAGGATGTGGCCCCTGACGAGAGGAATTTGCCCTaGAGTGGGATGATCTGCTTCAACTTCATGACGTTG +
Preference number: 3 (lower is better)
Translates to: SEDVAPDERNLP*SGMICFNFMTL
Trigger: CAACGTCATGAAGTTGAAGCAGATCATCCCACTGCAGGGCAAATTCCTCTCGTCAGGGGCCACATCCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR-3UTR CAA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATAGCGCATTTTGCATTTaGGAGACCGGCCGCCCCTGT +
Preference number: 3 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDSAFCI*ETGRPC
Trigger: ACAGGGGCGGCCGGTCTCCAAAATGCAAAATGCGCT...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR-3UTR CAA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATGGGCTGAAGCGCATTTaGCATTTTGGAGACCGGCCG +
Preference number: 3 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDGLKRI*HFGDRP
Trigger: CGGCCGGTCTCCAAAATGCAAAATGCGCTTCAGCCC...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR-3UTR CAA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGCTGAAGCGCATTTaGCATTTTGGAGACCGGCCG +
Preference number: 3 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICGLKRI*HFGDRP
Trigger: CGGCCGGTCTCCAAAATGCAAAATGCGCTTCAGCCC...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp GCGGGGCGCAGGGCGCCGGAGGCTCAGGAGGCCAAGCAGGGCTCGGGCCAGCTCGGCCAGCGCTGTCCCTaGGCCTTCCTCTTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: AGRRAPEAQEAKQGSGQLGQRCP*AFLFGP
Trigger: CGGCCCGAAGAGGAAGGCTCAGGGACAGCGCTGGCC...GAGCTGGCCCGAGCCCTGCTTGGCCTCCTGAGCCTCCGGCGCCCTGCGCCCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CGGGTCGAATCGCTGTTGGAGCCGGGTTCCGGGTCCGGGCCCCCGTCGGGCCCCGTGGGGGCCCGGCCATaGCACAGGGTGGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: RVESLLEPGSGSGPPSGPVGARP*HRVGTR
Trigger: CCGAGTGCCCACCCTGTGCCATGGCCGGGCCCCCAC...GGGGCCCGACGGGGGCCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CGGGTCGAATCGCTGTTGGAGCCGGGTTCCGGGTCCGGGCCCCCGTCGGGCCCCTGGGCGGTGAGTGGCTaGGCTCAGAGTCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: RVESLLEPGSGSGPPSGPWAVSG*AQSPAG
Trigger: CCCGGCGGGACTCTGAGCGCAGCCACTCACCGCCCA...GGGGCCCGACGGGGGCCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CGGGTCGAATCGCTGTTGGAGCCGGGTTCCGGGTCCGGGCCCCCGTCGGGCCCCCTGCCTGTGGGTGACTaGGCAGGGGGAGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RVESLLEPGSGSGPPSGPLPVGD*AGGGRV
Trigger: CACCCGGCCTCCCCCTGCCCAGTCACCCACAGGCAG...GGGGCCCGACGGGGGCCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGCCCGGCGGAACAAGATGGCCGGGGGCTCCCGTTCAGGGCTGGCTAGGGGAGGGCGCTaGGGTCTCGAGGGGATCCGA +
Preference number: 4 (lower is better)
Translates to: PSPPARRNKMAGGSRSGLARGGR*GLEGIR
Trigger: TCGGATCCCCTCGAGACCCCAGCGCCCTCCCCTAGC...CAGCCCTGAACGGGAGCCCCCGGCCATCTTGTTCCGCCGGGCCGGGGGCGAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CGGGTCGAATCGCTGTTGGAGCCGGGTTCCGGGTCCGGGCCCCCGTCGGGCCCCCGGTACAGGTGCGGCTaGAGGACCTCGCGCACGTTC +
Preference number: 4 (lower is better)
Translates to: RVESLLEPGSGSGPPSGPRYRCG*RTSRTF
Trigger: GAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCG...GGGGCCCGACGGGGGCCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CCAGGGCCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGCGAGGGGATCCGAGGTaGGCGGTAGCGGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PGPRPPAHSSEPGCCHCWRGDPR*AVAVGA
Trigger: CGCCCCCACCGCTACCGCCCACCTCGGATCCCCTCG...CCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp GCGGGGCGCAGGGCGCCGGAGGCTCAGGAGGCCAAGCAGGGCTCGGGCCAGCTCCACGGCCTGCACCCATaGCTTCATGAGGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: AGRRAPEAQEAKQGSGQLHGLHP*LHEAVQ
Trigger: CTGAACCGCCTCATGAAGTCATGGGTGCAGGCCGTG...GAGCTGGCCCGAGCCCTGCTTGGCCTCCTGAGCCTCCGGCGCCCTGCGCCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCGCCTGCGAGGAGAAGCCGCGGGTaGCCCCGCCAAACTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PGMVLCMALSLLLLPPPARRSRG*PRQTRP
Trigger: AGGCCGAGTTTGGCGGGGGCACCCGCGGCTTCTCCT...CGCAGGCGGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CCAGGGCCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGCCCGGCTGCTGCCACTaGTGGGGGTCCCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: PGPRPPAHSSEPGCCHCWPGCCH*WGSHLA
Trigger: GGCCAGATGGGACCCCCAGCAGTGGCAGCAGCCGGG...CCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CCAGGGCCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGACCAGCACCGCCTaGAGCTGCCGCTCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PGPRPPAHSSEPGCCHCWGTSTA*SCRSRL
Trigger: GAGCCTCGAGCGGCAGCTGCAGGCGGTGCTGGTCCC...CCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CCAGGGCCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGCACGGGCTCGCCACCTaGCCGTACTTTGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PGPRPPAHSSEPGCCHCWHGLAT*PYFGPG
Trigger: GCCCGGGCCAAAGTACGGGCAGGTGGCGAGCCCGTG...CCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp GGCGCCGGTACAGGTGCGGCTGCAGGACCTCGCGCACGTTCTGGAGGAACTGGCCCAGCCGCCTGCACCTaGTTGCTGGCCGCCCCCGAC +
Preference number: 4 (lower is better)
Translates to: GAGTGAAAGPRARSGGTGPAACT*LLAAPD
Trigger: GTCGGGGGCGGCCAGCAAGCAGGTGCAGGCGGCTGG...GCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCGCCTGCGCCTGAACTGGGGGCGTaGCTCCTCCACGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PGMVLCMALSLLLLPPPAPELGA*LLHGFP
Trigger: GGGGAAGCCGTGGAGGAGCCACGCCCCCAGTTCAGG...CGCAGGCGGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 72 bp CGGTTCTGCCGTCTCTGCCTACGGGTCGAATCGCTGTaGGAGCCGGGTTCCGGGTCCGGGCCCCCGTCGGGC +
Preference number: 4 (lower is better)
Translates to: RFCRLCLRVESL*EPGSGSGPPSG
Trigger: GCCCGACGGGGGCCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCGTAGGCAGAGACGGCAGAACCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp TTGACCAGGGCGCACAGCGCCGCCAGGGGGAAGGCGGACGAGAAGAGCACAACGGCTCCCGTTCAGGGCTaGCGGGAGCCCCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: LTRAHSAARGKADEKSTTAPVQG*REPPPP
Trigger: AGGCGGAGGGGGCTCCCGGCAGCCCTGAACGGGAGC...CGTTGTGCTCTTCTCGTCCGCCTTCCCCCTGGCGGCGCTGTGCGCCCTGGTCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp GACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAATACAGCCTGGCACCCAGCACAGCCACGCTaGCCACCCCGGCGAGGACCC +
Preference number: 4 (lower is better)
Translates to: DAPRREAPSAQPQNTAWHPAQPR*PPRRGP
Trigger: GGGTCCTCGCCGGGGTGGGCAGCGTGGCTGTGCTGG...GTGCCAGGCTGTATTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CTCCGCTGCTTTGGACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAACCGCCTGCACCTGCTTaGTGGCCGCCCCCGACCCCA +
Preference number: 4 (lower is better)
Translates to: LRCFGRASTRGPQRSATKPPAPA*WPPPTP
Trigger: TGGGGTCGGGGGCGGCCAGCAAGCAGGTGCAGGCGG...TTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGCCCGGCGGAACAAGATGGCCGGGGGCTCCCGTTCAGGGCTGCAGCTCCGGGATGATTaGCTGGTCCTCCAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: PSPPARRNKMAGGSRSGLQLRDD*LVLQEA
Trigger: CGCTTCCTGGAGGACCAGCCAATCATCCCGGAGCTG...CAGCCCTGAACGGGAGCCCCCGGCCATCTTGTTCCGCCGGGCCGGGGGCGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp GCGCTGGCCGAAGGGCCGCTGCAGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGGGGTCGAATCGCTGTTaGAGCCGGGTTCCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: ALAEGPLQPGAQLEGVAAGSNRC*SRVPGP
Trigger: CGGACCCGGAACCCGGCTCCAACAGCGATTCGACCC...CGCAGCGACGCCTTCAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp GCTCCCGCCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCCTACCACCGACACGATaGCTGCCTCCGGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: APAGHGALHGAVAPPPPALPPTR*LPPGSA
Trigger: GGCTGAGCCCGGAGGCAGCCATCGTGTCGGTGGTAG...GGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CTCCGCTGCTTTGGACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAAGGCCGTTCAGGCCCGTaGCCACCCGCAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LRCFGRASTRGPQRSATKGRSGP*PPAVLP
Trigger: GGGCAGCACTGCGGGTGGCCACGGGCCTGAACGGCC...TTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp GCTCCCGCCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCCTGCCAGCTCCGGGATaGTTGGCTGGTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: APAGHGALHGAVAPPPPALPAPG*LAGPPG
Trigger: TCCTGGAGGACCAGCCAATCATCCCGGAGCTGGCAG...GGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGTCCGGAGGAACTGGCGGGTaGTCAGCAGCGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PRPPAHSSEPGCCHCWGSGGTGG*SAAWPA
Trigger: TGCTGGCCACGCTGCTGATCACCCGCCAGTTCCTCC...GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGTCCCGCGCTCAGCGAAGCTaGCCTTCTTCAGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: PRPPAHSSEPGCCHCWGSRAQRS*PSSAGA
Trigger: GGCTCCGGCTGAAGAAGGTCAGCTTCGCTGAGCGCG...GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp TTGACCAGGGCGCACAGCGCCGCCAGGGGGAAGGCGGACGAGAAGAGCACAACGCCTCCTCGGCCAGGGTaGACACTCCCGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LTRAHSAARGKADEKSTTPPRPG*TLPAPA
Trigger: GGCTGGAGCCGGGAGTGTTCACCCTGGCCGAGGAGG...CGTTGTGCTCTTCTCGTCCGCCTTCCCCCTGGCGGCGCTGTGCGCCCTGGTCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp GCGCTGGCCGAAGGGCCGCTGCAGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGGAAGGCTTTGGGCGGTaGGTGGCTGCGCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: ALAEGPLQPGAQLEGVAAEGFGR*VAALRV
Trigger: GACTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTC...CGCAGCGACGCCTTCAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CGCCTCGTCGTCCTCCTCGGCCAGGGTGAACACTCCCGGCTCCAGCCCCTTCTCCACCGACACGATGGCTaGCTCCGGGCTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLVVLLGQGEHSRLQPLLHRHDG*LRAQPG
Trigger: CCCTGGCTGAGCCCGGAGGCAGCCATCGTGTCGGTG...GAGAAGGGGCTGGAGCCGGGAGTGTTCACCCTGGCCGAGGAGGACGACGAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGCCCGGCGGAACAAGATGGCCGGGGGCTCCCGTTCAGGGCTGTCGGGGATGGCCACGTaGATGAGGTACTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSPPARRNKMAGGSRSGLSGMAT*MRYLRS
Trigger: GCTCCTCAAGTACCTCATCCACGTGGCCATCCCCGA...CAGCCCTGAACGGGAGCCCCCGGCCATCTTGTTCCGCCGGGCCGGGGGCGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGTCCGCTTTGGGCGGTGAGTaGCTGCGCTCAGAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: PRPPAHSSEPGCCHCWGSALGGE*LRSESR
Trigger: GCGGGACTCTGAGCGCAGCCACTCACCGCCCAAAGC...GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp GACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAATACAGCCTGGCACTACGTCGCACGCCCCTaGACTGGGGGCGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DAPRREAPSAQPQNTAWHYVARP*TGGVAP
Trigger: AGGAGCCACGCCCCCAGTTCAGGGGCGTGCGACGTA...GTGCCAGGCTGTATTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CGGGTCGAATCGCTGTTGGAGCCGGGTTCCGGGTCCGGGCCCCCGTCGGGCCCCCGGTTCAGAATACGCTaGTCGTGGACAGGGAACACC +
Preference number: 4 (lower is better)
Translates to: RVESLLEPGSGSGPPSGPRFRIR*SWTGNT
Trigger: GGTGTTCCCTGTCCACGAGCAGCGTATTCTGAACCG...GGGGCCCGACGGGGGCCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGTCCCATGACGTTGTTGGGTaGCAGCAGGGACCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PRPPAHSSEPGCCHCWGSHDVVG*QQGPWA
Trigger: CGCCCAGGGTCCCTGCTGGCACCCAACAACGTCATG...GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp GGCGCCGGTACAGGTGCGGCTGCAGGACCTCGCGCACGTTCTGGAGGAACTGGCAGGCGGCCTCGGCCATaGCGAGGACAGGTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GAGTGAAAGPRARSGGTGRRPRP*RGQVRS
Trigger: TGACCTGACCTGTCCTCGCCATGGCCGAGGCCGCCT...GCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CGGGTCGAATCGCTGTTGGAGCCGGGTTCCGGGTCCGGGCCCCCGTCGGGCCCCGTCATCGGTCGTGTCTaGGAAGGTCATCAGCACGTC +
Preference number: 4 (lower is better)
Translates to: RVESLLEPGSGSGPPSGPVIGRV*EGHQHV
Trigger: GACGTGCTGATGACCTTCCCAGACACGACCGATGAC...GGGGCCCGACGGGGGCCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp ATCACCTTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTGCCTCCTCCTTGCCCCCTaGAGGCCCGTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ITFCHWPMLSTRWPKGRCLLLAP*RPVPLL
Trigger: GAGGAGGGGGACGGGCCTCCAGGGGGCAAGGAGGAG...GCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGGTGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp ATGACGTTGTTGGGTGCCAGCAGGGACCCTGGGCGCTTGGGCCGTTCAGGCCCGTGCCAGCAGGGACCCTaGGCGCTTGGGCCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: MTLLGASRDPGRLGRSGPCQQGP*ALGPFR
Trigger: CCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCA...CGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGCCCGGCGGAACAAGATGGCCGGGGGCTCCCGTTCAGGGCTGAAGAGCTTGCCAGCATaGAAGGCTTTGGGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: PSPPARRNKMAGGSRSGLKSLPA*KALGGE
Trigger: CTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTT...CAGCCCTGAACGGGAGCCCCCGGCCATCTTGTTCCGCCGGGCCGGGGGCGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp GACCCAGGCTCAGCCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATGGAAGAAGGAGAGAGGCGCGTaGGGGGCAAGCGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: DPGSARVPPKGKSLPAWKKERGA*GASGAP
Trigger: CGGCGCCCCGCTTGCCCCCCACGCGCCTCTCTCCTT...CTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp TTGACCAGGGCGCACAGCGCCGCCAGGGGGAAGGCGGACGAGAAGAGCACAACGGCCCGGTGCACAGCTTaGAGGCGTCGCTGCGGATCT +
Preference number: 4 (lower is better)
Translates to: LTRAHSAARGKADEKSTTARCTA*RRRCGS
Trigger: AGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGC...CGTTGTGCTCTTCTCGTCCGCCTTCCCCCTGGCGGCGCTGTGCGCCCTGGTCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp GACCCAGGCTCAGCCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATGGAAGCCTCGTCCTCCTCCTTaGCCCCTGGAGGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: DPGSARVPPKGKSLPAWKPRPPP*PLEARP
Trigger: GGGACGGGCCTCCAGGGGGCAAGGAGGAGGACGAGG...CTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp ATCACCTTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTGCTGGCCGAAGGGCCGCTaGAGCCCGGTGCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: ITFCHWPMLSTRWPKGRCWPKGR*SPVHSL
Trigger: CAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCA...GCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGGTGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CCTTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTGCAGCCCAGGCTCAGCCCGGGTaGCACCAAAGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PSATGRCFPRAGRRAAAAQAQPG*HQRGRA
Trigger: AGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTG...GGCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp GACCCAGGCTCAGCCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATGGAAGGATTCCCTCCGCGCATaGGCCCTCAGCTCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: DPGSARVPPKGKSLPAWKDSLRA*ALSSAR
Trigger: GCGCGCCGAGCTGAGGGCGCATGCGCGGAGGGAATC...CTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CCAGGGCCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGTCCGGGATGATTGGCTaGTCCTCCAGGAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: PGPRPPAHSSEPGCCHCWSGMIG*SSRKRT
Trigger: CGTGCGCTTCCTGGAGGACCAGCCAATCATCCCGGA...CCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CCTTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTGCAGCCGCATGGTGCTCTGCATaGCGCTGTCGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSATGRCFPRAGRRAAAAAWCSA*RCRSSS
Trigger: GGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGC...GGCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp GACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAATACAGCCTGGCACCCTTCTCGGAGGAGGTaGCAGGGTCCAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: DAPRREAPSAQPQNTAWHPSRRR*QGPAQS
Trigger: GCTCTGGGCTGGACCCTGCCACCTCCTCCGAGAAGG...GTGCCAGGCTGTATTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp CCTTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTGCAGCCGGAACACCTGCTGGATaGTCCCACGTGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSATGRCFPRAGRRAAAAGTPAG*SHVLPA
Trigger: AGCTGGCAGCACGTGGGATCATCCAGCAGGTGTTCC...GGCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp CCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCGCCTGCGTCGACCAGATCACGTTaGAGAGGGCAAAGACCACGC +
Preference number: 4 (lower is better)
Translates to: PGMVLCMALSLLLLPPPASTRSR*RGQRPR
Trigger: GCGTGGTCTTTGCCCTCTTCAACGTGATCTGGTCGA...CGCAGGCGGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp CGGGTCGAATCGCTGTTGGAGCCGGGTTCCGGGTCCGGGCCCCCGTCGGGCCCCGGCCGCCCCTGTGAATaGCTGATATTGCATATGAGA +
Preference number: 4 (lower is better)
Translates to: RVESLLEPGSGSGPPSGPGRPCE*LILHMR
Trigger: TCTCATATGCAATATCAGTCATTCACAGGGGCGGCC...GGGGCCCGACGGGGGCCCGGACCCGGAACCCGGCTCCAACAGCGATTCGACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp GCGCTGGCCGAAGGGCCGCTGCAGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGTGGACAGGGAACACCTaGTGGATGATCCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: ALAEGPLQPGAQLEGVAAWTGNT*WMIPRA
Trigger: AGCACGTGGGATCATCCAGCAGGTGTTCCCTGTCCA...CGCAGCGACGCCTTCAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGTCCACGTTCTGGAGGAACTaGCGGGTGATCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PRPPAHSSEPGCCHCWGSTFWRN*RVISSV
Trigger: CACGCTGCTGATCACCCGCCAGTTCCTCCAGAACGT...GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CTCCGCTGCTTTGGACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAATGCTGCCCTTGGCCTTaGCAGAGGCCTTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: LRCFGRASTRGPQRSATKCCPWP*QRPSRR
Trigger: CCTCCGAGAAGGCCTCTGCCAAGGCCAAGGGCAGCA...TTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp TTGACCAGGGCGCACAGCGCCGCCAGGGGGAAGGCGGACGAGAAGAGCACAACGCCGCAGTGCTGCCCTTaGCCTTGGCAGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LTRAHSAARGKADEKSTTPQCCP*PWQRPS
Trigger: AGAAGGCCTCTGCCAAGGCCAAGGGCAGCACTGCGG...CGTTGTGCTCTTCTCGTCCGCCTTCCCCCTGGCGGCGCTGTGCGCCCTGGTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 72 bp AGACACACGCCGAATCCGGTTCCTAACTCCGCTGCTTaGGACGCGCCTCGACGCGAGGCCCCCAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: RHTPNPVPNSAA*DAPRREAPSAQ
Trigger: CTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAGTTAGGAACCGGATTCGGCGTGTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp CTCCGCTGCTTTGGACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAACCGCCGGGTCTCGGGTaGCTTGAGGAACTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LRCFGRASTRGPQRSATKPPGLG*LEELEA
Trigger: AGCTTCAAGTTCCTCAAGTCACCCGAGACCCGGCGG...TTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp ATGACGTTGTTGGGTGCCAGCAGGGACCCTGGGCGCTTGGGCCGTTCAGGCCCGCGGTGGTGGCGGACTTaGACGATGAGCTCGGGAATG +
Preference number: 4 (lower is better)
Translates to: MTLLGASRDPGRLGRSGPRWWRT*TMSSGM
Trigger: CATTCCCGAGCTCATCGTGCAAGTCCGCCACCACCG...CGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp GCGCTGGCCGAAGGGCCGCTGCAGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGTGGAGTGCTTCTCCCTaGTTGGCACGCAAATTCTGC +
Preference number: 4 (lower is better)
Translates to: ALAEGPLQPGAQLEGVAAWSASP*LARKFC
Trigger: GCAGAATTTGCGTGCCAAGCAGGGAGAAGCACTCCA...CGCAGCGACGCCTTCAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp TTGACCAGGGCGCACAGCGCCGCCAGGGGGAAGGCGGACGAGAAGAGCACAACGCAAGACGACCGGTTCTaGCGTCTCTGCCTACGGGTC +
Preference number: 4 (lower is better)
Translates to: LTRAHSAARGKADEKSTTQDDRF*RLCLRV
Trigger: GACCCGTAGGCAGAGACGGCAGAACCGGTCGTCTTG...CGTTGTGCTCTTCTCGTCCGCCTTCCCCCTGGCGGCGCTGTGCGCCCTGGTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTCGTCGTCCTCCTCGGCCAGGGTGAACACTCCCGGCTCCAGCCCCTTCTCATGCCCACGCGGATGTaGTTCAGCAGCCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLVVLLGQGEHSRLQPLLMPTRM*FSSHSS
Trigger: GCTGCTATGGCTGCTGAACCACATCCGCGTGGGCAT...GAGAAGGGGCTGGAGCCGGGAGTGTTCACCCTGGCCGAGGAGGACGACGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CTCCGCTGCTTTGGACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAAACCTCGCGCACGTTCTaGAGGAACTGGCGGGTGATC +
Preference number: 4 (lower is better)
Translates to: LRCFGRASTRGPQRSATKTSRTF*RNWRVI
Trigger: GATCACCCGCCAGTTCCTCCAGAACGTGCGCGAGGT...TTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp AGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGGATCTCAATGAGGTTGTTGACCGGGACCCTGGGCGCTTaGGCCGTTCAGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SPVHSLKASLRISMRLLTGTLGA*AVQARG
Trigger: GCCACGGGCCTGAACGGCCCAAGCGCCCAGGGTCCC...GGTCAACAACCTCATTGAGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp ATGACGTTGTTGGGTGCCAGCAGGGACCCTGGGCGCTTGGGCCGTTCAGGCCCGCCACAAAATACAGCCTaGCACGCGCAGCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: MTLLGASRDPGRLGRSGPPQNTA*HAQRSS
Trigger: CGAGGAGCGCTGCGCGTGCCAGGCTGTATTTTGTGG...CGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 72 bp CGCTGGCCGAAGGGCCGCTGCAGCCCGGTGCACAGCTaGAAGGCGTCGCTGCGGATCTCAATGAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: RWPKGRCSPVHS*KASLRISMRLL
Trigger: CAACAACCTCATTGAGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp AATCATGCTCCCGCCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTACAGCTCTCCAGCTCTaGCTGGGTGAGCTGGGGCGA +
Preference number: 4 (lower is better)
Translates to: NHAPAGHGALHGAVAPPPTALQL*LGELGR
Trigger: TCGCCCCAGCTCACCCAGGCAGAGCTGGAGAGCTGT...AGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGCATGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp AGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGGATCTCAATGAGGTTGTTGACCCAGGGGAAGAGGCGCTaGAGCTGCCCGCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: SPVHSLKASLRISMRLLTQGKRR*SCPHWP
Trigger: CGGCCAGTGCGGGCAGCTGCAGCGCCTCTTCCCCTG...GGTCAACAACCTCATTGAGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTCGTCGTCCTCCTCGGCCAGGGTGAACACTCCCGGCTCCAGCCCCTTCTCATGCTCTGGCGTTCCTaGGAGGTGAAGAAGCGTAGC +
Preference number: 4 (lower is better)
Translates to: RLVVLLGQGEHSRLQPLLMLWRS*EVKKRS
Trigger: GCTACGCTTCTTCACCTCCCAGGAACGCCAGAGCAT...GAGAAGGGGCTGGAGCCGGGAGTGTTCACCCTGGCCGAGGAGGACGACGAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp TTGACCAGGGCGCACAGCGCCGCCAGGGGGAAGGCGGACGAGAAGAGCACAACGATCACCTTCTGCCACTaGCCGATGCTTTCCACGCGC +
Preference number: 4 (lower is better)
Translates to: LTRAHSAARGKADEKSTTITFCH*PMLSTR
Trigger: GCGCGTGGAAAGCATCGGCCAGTGGCAGAAGGTGAT...CGTTGTGCTCTTCTCGTCCGCCTTCCCCCTGGCGGCGCTGTGCGCCCTGGTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGTCCGAGAGGAATTTGCCCTaGAGTGGGATGATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PRPPAHSSEPGCCHCWGSERNLP*SGMICF
Trigger: GAAGCAGATCATCCCACTGCAGGGCAAATTCCTCTC...GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp GCGGGGCGCAGGGCGCCGGAGGCTCAGGAGGCCAAGCAGGGCTCGGGCCAGCTCTACGAGTTGACAAACTaGAACAGGACAACTTTGATG +
Preference number: 4 (lower is better)
Translates to: AGRRAPEAQEAKQGSGQLYELTN*NRTTLM
Trigger: CATCAAAGTTGTCCTGTTCCAGTTTGTCAACTCGTA...GAGCTGGCCCGAGCCCTGCTTGGCCTCCTGAGCCTCCGGCGCCCTGCGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp GACCCAGGCTCAGCCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATGGAAGAAGGCCTCGCGGCGCTaGTACTCCAGCTTGGCCATT +
Preference number: 4 (lower is better)
Translates to: DPGSARVPPKGKSLPAWKKASRR*YSSLAI
Trigger: AATGGCCAAGCTGGAGTACCAGCGCCGCGAGGCCTT...CTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp AATCATGCTCCCGCCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCAGCATGGAAGGCTTTaGGCGGTGAGTGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: NHAPAGHGALHGAVAPPPQHGRL*AVSGCA
Trigger: AGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTG...AGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGCATGATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp CTCCGCTGCTTTGGACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAAACATCCCGGCTTGTCTaGTCAGCCTCTGTGAATGTG +
Preference number: 4 (lower is better)
Translates to: LRCFGRASTRGPQRSATKTSRLV*SASVNV
Trigger: CACATTCACAGAGGCTGATCAGACAAGCCGGGATGT...TTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp CCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGGGGTCCCGATTAAGTAGCAGTTaGCCACAATCGCTAGGACAC +
Preference number: 4 (lower is better)
Translates to: PRPPAHSSEPGCCHCWGSRLSSS*PQSLGH
Trigger: GTGTCCTAGCGATTGTGGTCAACTGCTACTTAATCG...GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp GACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAATACAGCCTGGCACGACCGGCCGCCCCTGTaGATGACTGATATTGCATAT +
Preference number: 4 (lower is better)
Translates to: DAPRREAPSAQPQNTAWHDRPPL*MTDIAY
Trigger: ATATGCAATATCAGTCATTCACAGGGGCGGCCGGTC...GTGCCAGGCTGTATTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp GACCCAGGCTCAGCCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATGGAAGGATGATCCCACGTGCTaGCAGCTCCGGGATGATTGG +
Preference number: 4 (lower is better)
Translates to: DPGSARVPPKGKSLPAWKDDPTC*QLRDDW
Trigger: CCAATCATCCCGGAGCTGGCAGCACGTGGGATCATC...CTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CCTTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTGCAGCCTTTTCACACACGGCCTaGACCCATGACTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: PSATGRCFPRAGRRAAAAFSHTA*THDFMR
Trigger: CCTCATGAAGTCATGGGTGCAGGCCGTGTGTGAAAA...GGCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp AGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGGATCTCAATGAGGTTGTTGACCCGGCCACCAGAATCATaGTCCCGCCGGGCATGGTGC +
Preference number: 4 (lower is better)
Translates to: SPVHSLKASLRISMRLLTRPPES*SRRAWC
Trigger: GCACCATGCCCGGCGGGAGCATGATTCTGGTGGCCG...GGTCAACAACCTCATTGAGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp GGCGCCGGTACAGGTGCGGCTGCAGGACCTCGCGCACGTTCTGGAGGAACTGGCATGTCATCTAGAGGCTaGTTTTCACACACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GAGTGAAAGPRARSGGTGMSSRG*FSHTAC
Trigger: GCAGGCCGTGTGTGAAAACCAGCCTCTAGATGACAT...GCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCGCCTGCGGCCAGGCGAAGTACATaGCAATTTTCACACCAAAGT +
Preference number: 4 (lower is better)
Translates to: PGMVLCMALSLLLLPPPAARRST*QFSHQS
Trigger: ACTTTGGTGTGAAAATTGCCATGTACTTCGCCTGGC...CGCAGGCGGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp AGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGGATCTCAATGAGGTTGTTGACCATGCTTTCCACGCGCTaGCCGAAGGGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SPVHSLKASLRISMRLLTMLSTR*PKGRCS
Trigger: GCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCAT...GGTCAACAACCTCATTGAGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp GACGCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAATACAGCCTGGCACGGCTCAGGTACGAGTTaGCAAACTGGAACAGGACAA +
Preference number: 4 (lower is better)
Translates to: DAPRREAPSAQPQNTAWHGSGTS*QTGTGQ
Trigger: TTGTCCTGTTCCAGTTTGTCAACTCGTACCTGAGCC...GTGCCAGGCTGTATTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CCAGGGCCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGTGCAGTGGGATGATCTaGTTCAACTTCATGACGTTG +
Preference number: 4 (lower is better)
Translates to: PGPRPPAHSSEPGCCHCWCSGMI*FNFMTL
Trigger: CAACGTCATGAAGTTGAAGCAGATCATCCCACTGCA...CCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp TGGAACGTGTCCTCGTACTTCTTCATACAGCTCTCCAGCTCTGCCTGGGTGAGCCCCGCCGGAGCACCGTaGCCAGACACACGCCGAATC +
Preference number: 4 (lower is better)
Translates to: WNVSSYFFIQLSSSAWVSPAGAP*PDTRRI
Trigger: GATTCGGCGTGTGTCTGGGCACGGTGCTCCGGCGGG...GCTCACCCAGGCAGAGCTGGAGAGCTGTATGAAGAAGTACGAGGACACGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 72 bp CCCGGGATATCGGGGATGGCCACGTGGATGAGGTACTaGAGGAGCAGAGCGAAGTGCTCGAGCACTACCACC +
Preference number: 4 (lower is better)
Translates to: PGISGMATWMRY*RSRAKCSSTTT
Trigger: GGTGGTAGTGCTCGAGCACTTCGCTCTGCTCCTCAAGTACCTCATCCACGTGGCCATCCCCGATATCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 72 bp CCCTGCAGTGGGATGATCTGCTTCAACTTCATGACGTaGTTGGGTGCCAGCAGGGACCCTGGGCGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PCSGMICFNFMT*LGASRDPGRLG
Trigger: GCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCATGAAGTTGAAGCAGATCATCCCACTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp ATCACCTTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTGCAGCGCTCCATGTCCTTaGGGTAGAAACCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: ITFCHWPMLSTRWPKGRCSAPCP*GRNRCR
Trigger: TCTACATCGGTTTCTACCTCAAGGACATGGAGCGCT...GCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
3UTR CAA 72 bp TGCAGTGGGATGATCTGCTTCAACTTCATGACGTTGTaGGGTGCCAGCAGGGACCCTGGGCGCTTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: CSGMICFNFMTL*GASRDPGRLGR
Trigger: ACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCATGAAGTTGAAGCAGATCATCCCACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp CAGCCCGGGATATCGGGGATGGCCACGTGGATGAGGTACTTGAGGAGCAGAGCGGCACCCATGACTTCATaGGGCGGTTCAGAATACGCT +
Preference number: 4 (lower is better)
Translates to: QPGISGMATWMRYLRSRAAPMTS*GGSEYA
Trigger: AGCGTATTCTGAACCGCCTCATGAAGTCATGGGTGC...CGCTCTGCTCCTCAAGTACCTCATCCACGTGGCCATCCCCGATATCCCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATCGCTCGCCCGAGCGCTaGTTCTCGTCCCCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDRSPER*FSSPPE
Trigger: CTCGGGCGGGGACGAGAAGCAGCGCTCGGGCGAGCG...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000159087.7
CDS-3UTR GCA 90 bp AGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGGATCTCAATGAGGTTGTTGACCCTGGATGATCCCACGTaGTGCCAGCTCCGGGATGAT +
Preference number: 4 (lower is better)
Translates to: SPVHSLKASLRISMRLLTLDDPT*CQLRDD
Trigger: ATCATCCCGGAGCTGGCAGCACGTGGGATCATCCAG...GGTCAACAACCTCATTGAGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp ACTGCACGAACATCTCCTGGTAGTCCTGGAACGTGTCCTCGTACTTCTTCATACAGGCGCCGGTACAGGTaGGGCTGCAGGACCTCGCGC +
Preference number: 4 (lower is better)
Translates to: TARTSPGSPGTCPRTSSYRRRYR*GCRTSR
Trigger: GCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCCT...GTATGAAGAAGTACGAGGACACGTTCCAGGACTACCAGGAGATGTTCGTGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp TGGAACGTGTCCTCGTACTTCTTCATACAGCTCTCCAGCTCTGCCTGGGTGAGCTCTGCCACTGGCCGATaGTTTCCACGCGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: WNVSSYFFIQLSSSAWVSSATGR*FPRAGR
Trigger: TCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGA...GCTCACCCAGGCAGAGCTGGAGAGCTGTATGAAGAAGTACGAGGACACGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp GCGCTGGCCGAAGGGCCGCTGCAGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGTTTCTGTTGGATTTGTaGGTTTCCTTTCGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: ALAEGPLQPGAQLEGVAAFLLDL*VSFRLE
Trigger: TTCCAAACGAAAGGAAACCCACAAATCCAACAGAAA...CGCAGCGACGCCTTCAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATGCTCTGTCGGTGCACTaGGCCGCGTGCGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDALSVH*AACAPS
Trigger: GCTGGGGGCGCACGCGGCCCAGTGCACCGACAGAGC...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp CAGCCCGGGATATCGGGGATGGCCACGTGGATGAGGTACTTGAGGAGCAGAGCGTCTGATCAGCCTCTGTaGATGTGTACAGGACAGACC +
Preference number: 4 (lower is better)
Translates to: QPGISGMATWMRYLRSRASDQPL*MCTGQT
Trigger: GGTCTGTCCTGTACACATTCACAGAGGCTGATCAGA...CGCTCTGCTCCTCAAGTACCTCATCCACGTGGCCATCCCCGATATCCCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp ATCACCTTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTGCGGGTTTCCTTTCGTTTaGAAAGGAAAACGGCAGATG +
Preference number: 4 (lower is better)
Translates to: ITFCHWPMLSTRWPKGRCGFPFV*KGKRQM
Trigger: CATCTGCCGTTTTCCTTTCCAAACGAAAGGAAACCC...GCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATAGGAGAAGCCGCGGGTaGCCCCGCCAAACTCGGCCT +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDRRSRG*PRQTRP
Trigger: AGGCCGAGTTTGGCGGGGGCACCCGCGGCTTCTCCT...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp ACTGCACGAACATCTCCTGGTAGTCCTGGAACGTGTCCTCGTACTTCTTCATACTCCTCTGAACCCGGCTaGTGCCACTGCTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TARTSPGSPGTCPRTSSYSSEPG*CHCWGS
Trigger: GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGA...GTATGAAGAAGTACGAGGACACGTTCCAGGACTACCAGGAGATGTTCGTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCAGGGCCCGTCCCACTaGCAGCAGCCTGCGGGCGGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFQGPSH*QQPAGG
Trigger: ACCGCCCGCAGGCTGCTGGCAGTGGGACGGGCCCTG...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATCCTGAACTGGGGGCGTaGCTCCTCCACGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDPELGA*LLHGFP
Trigger: GGGGAAGCCGTGGAGGAGCCACGCCCCCAGTTCAGG...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATCCCGGCGGAACAAGATaGCCGGGGGCTCCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDPGGTR*PGAPVQ
Trigger: CTGAACGGGAGCCCCCGGCCATCTTGTTCCGCCGGG...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCGGCCGTTCAGGCCCGTaGCCACCCGCAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFGRSGP*PPAVLP
Trigger: GGGCAGCACTGCGGGTGGCCACGGGCCTGAACGGCC...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATGCTAGGGGAGGGCGCTaGGGTCTCGAGGGGATCCGA +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDARGGR*GLEGIR
Trigger: TCGGATCCCCTCGAGACCCCAGCGCCCTCCCCTAGC...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATCACCTGCCCGTACTTTaGCCCGGGCCGCGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDHLPVL*PGPRAG
Trigger: TCCTGCTCGCGGCCCGGGCCAAAGTACGGGCAGGTG...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTCCTCCTCGGCCAGGGTaGACACTCCCGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVPPRPG*TLPAPA
Trigger: GGCTGGAGCCGGGAGTGTTCACCCTGGCCGAGGAGG...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTCCTCGTCCTCCTCCTTaGCCCCTGGAGGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVPRPPP*PLEARP
Trigger: GGGACGGGCCTCCAGGGGGCAAGGAGGAGGACGAGG...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCTGGGCGGTGAGTGGCTaGGCTCAGAGTCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFWAVSG*AQSPAG
Trigger: CCCGGCGGGACTCTGAGCGCAGCCACTCACCGCCCA...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTCCTCTGAACCCGGCTaGTGCCACTGCTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDSSEPG*CHCWGS
Trigger: GGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGAGGA...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTCAGGGCCCGTCCCACTaGCAGCAGCCTGCGGGCGGT +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICQGPSH*QQPAGG
Trigger: ACCGCCCGCAGGCTGCTGGCAGTGGGACGGGCCCTG...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATCGCGTGTGGCGGTGGTaGCGGACTTGCACGATGAGC +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDRVWRW*RTCTMS
Trigger: GCTCATCGTGCAAGTCCGCCACCACCGCCACACGCG...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATGCACGCGTGTGGCGGTaGTGGCGGACTTGCACGATG +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDARVWR*WRTCTM
Trigger: CATCGTGCAAGTCCGCCACCACCGCCACACGCGTGC...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGACCCTGGGCGCTTaGGCCGTTCAGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICGTLGA*AVQARG
Trigger: GCCACGGGCCTGAACGGCCCAAGCGCCCAGGGTCCC...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CAGCCCGGGATATCGGGGATGGCCACGTGGATGAGGTACTTGAGGAGCAGAGCGGAATTTGCCCTGCAGTaGGATGATCTGCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: QPGISGMATWMRYLRSRAEFALQ*DDLLQL
Trigger: AAGTTGAAGCAGATCATCCCACTGCAGGGCAAATTC...CGCTCTGCTCCTCAAGTACCTCATCCACGTGGCCATCCCCGATATCCCGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTCTGCCTGTGGGTGACTaGGCAGGGGGAGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVLPVGD*AGGGRV
Trigger: CACCCGGCCTCCCCCTGCCCAGTCACCCACAGGCAG...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATGGCACCGACCAATACTaGGGGCCCTCGGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDGTDQY*GPSGAE
Trigger: TTCAGCCCCCGAGGGCCCCCAGTATTGGTCGGTGCC...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR CAA 72 bp GCAGCCAGTGAGGATGTGGCCCCTGACGAGAGGAATTaGCCCTGCAGTGGGATGATCTGCTTCAACTTCATG +
Preference number: 4 (lower is better)
Translates to: AASEDVAPDERN*PCSGMICFNFM
Trigger: CATGAAGTTGAAGCAGATCATCCCACTGCAGGGCAAATTCCTCTCGTCAGGGGCCACATCCTCACTGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATGAAGGCTTTGGGCGGTaGGTGGCTGCGCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDEGFGR*VAALRV
Trigger: GACTCTGAGCGCAGCCACTCACCGCCCAAAGCCTTC...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTACCGGCCCACTCCTCTaGACCCGGCTGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVTGPLL*TRLLPL
Trigger: CAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGT...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAGCTCCCGTTCAGGGCTaGCGGGAGCCCCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKAPVQG*REPPPP
Trigger: AGGCGGAGGGGGCTCCCGGCAGCCCTGAACGGGAGC...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATACAGCTCTCCAGCTCTaGCTGGGTGAGCTGGGGCGA +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDTALQL*LGELGR
Trigger: TCGCCCCAGCTCACCCAGGCAGAGCTGGAGAGCTGT...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTCTGCCACTGGCCGATaGTTTCCACGCGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDSATGR*FPRAGR
Trigger: TCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGA...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCGGCCACCCGCAGTGCTaGCCTTGGCCTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFGHPQC*PWPWQR
Trigger: CCTCTGCCAAGGCCAAGGGCAGCACTGCGGGTGGCC...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTCTGAACCCGGCTGCTaGCACTGCTGGGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDSEPGC*HCWGSH
Trigger: ATGGGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGA...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTCTCCTCCTTGCCCCCTaGAGGCCCGTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICLLLAP*RPVPLL
Trigger: GAGGAGGGGGACGGGCCTCCAGGGGGCAAGGAGGAG...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATCCGCAGTGCTGCCCTTaGCCTTGGCAGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDPQCCP*PWQRPS
Trigger: AGAAGGCCTCTGCCAAGGCCAAGGGCAGCACTGCGG...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTGCCAGCAGGGACCCTaGGCGCTTGGGCCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVCQQGP*ALGPFR
Trigger: CCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCA...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAGTGGGGGCCCGGCCATaGCACAGGGTGGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKVGARP*HRVGTR
Trigger: CCGAGTGCCCACCCTGTGCCATGGCCGGGCCCCCAC...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAACGAGGGGATCCGAGGTaGGCGGTAGCGGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKRGDPR*AVAVGA
Trigger: CGCCCCCACCGCTACCGCCCACCTCGGATCCCCTCG...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCACGGCTTCCCCAGGTaGGTCCAGCGTCCCCCACTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFHGFPR*VQRPPL
Trigger: AAGTGGGGGACGCTGGACTCACCTGGGGAAGCCGTG...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTCACGGCTTCCCCAGGTaGGTCCAGCGTCCCCCACTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVHGFPR*VQRPPL
Trigger: AAGTGGGGGACGCTGGACTCACCTGGGGAAGCCGTG...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATCCGCCGGGTCTCGGGTaGCTTGAGGAACTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDPPGLG*LEELEA
Trigger: AGCTTCAAGTTCCTCAAGTCACCCGAGACCCGGCGG...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGCCAGCGCTGTCCCTaGGCCTTCCTCTTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKGQRCP*AFLFGP
Trigger: CGGCCCGAAGAGGAAGGCTCAGGGACAGCGCTGGCC...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTCGGTACAGGTGCGGCTaGAGGACCTCGCGCACGTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVRYRCG*RTSRTF
Trigger: GAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCG...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAAGGCGCCGGTACAGGTaGGGCTGCAGGACCTCGCGC +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKRRRYR*GCRTSR
Trigger: GCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCCT...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTTGGCCGAAGGGCCGCTaGAGCCCGGTGCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICWPKGR*SPVHSL
Trigger: CAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCA...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAACAGGGGAAGAGGCGCTaGAGCTGCCCGCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKQGKRR*SCPHWP
Trigger: CGGCCAGTGCGGGCAGCTGCAGCGCCTCTTCCCCTG...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTCACCGACACGATGGCTaGCTCCGGGCTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICHRHDG*LRAQPG
Trigger: CCCTGGCTGAGCCCGGAGGCAGCCATCGTGTCGGTG...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGGCCACCCGCAGTGCTaGCCTTGGCCTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKGHPQC*PWPWQR
Trigger: CCTCTGCCAAGGCCAAGGGCAGCACTGCGGGTGGCC...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAACCCGGCTGCTGCCACTaGTGGGGGTCCCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKPGCCH*WGSHLA
Trigger: GGCCAGATGGGACCCCCAGCAGTGGCAGCAGCCGGG...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTCGCGTGTGGCGGTGGTaGCGGACTTGCACGATGAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVRVWRW*RTCTMS
Trigger: GCTCATCGTGCAAGTCCGCCACCACCGCCACACGCG...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTGCTTTGGGCGGTGAGTaGCTGCGCTCAGAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVALGGE*LRSESR
Trigger: GCGGGACTCTGAGCGCAGCCACTCACCGCCCAAAGC...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTGGCACCGACCAATACTaGGGGCCCTCGGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVGTDQY*GPSGAE
Trigger: TTCAGCCCCCGAGGGCCCCCAGTATTGGTCGGTGCC...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTGCAGCCAGAAGCGGATaGTGCTCTGGCGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVAARSG*CSGVPG
Trigger: CCCAGGAACGCCAGAGCATCATCCGCTTCTGGCTGC...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAATACGTCGCACGCCCCTaGACTGGGGGCGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKYVARP*TGGVAP
Trigger: AGGAGCCACGCCCCCAGTTCAGGGGCGTGCGACGTA...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCGGCCTTCACTGCTTTaGGCAGACCCAGCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFRPSLL*ADPARR
Trigger: CCGACGAGCTGGGTCTGCGCAAAGCAGTGAAGGCCG...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTCGGCCACCAGAATCATaGTCCCGCCGGGCATGGTGC +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICRPPES*SRRAWC
Trigger: GCACCATGCCCGGCGGGAGCATGATTCTGGTGGCCG...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAGCAGGCGGGTGTCGCTaGCTGTGGGTGACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKAGGCR*LWVTGQ
Trigger: CTGCCCAGTCACCCACAGGCAGCGACACCCGCCTGC...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAAGCACCGCCTGCAGCTaGCGCTCGAGGCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKSTACS*RSRLWD
Trigger: GTCCCAGAGCCTCGAGCGGCAGCTGCAGGCGGTGCT...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGAGGCGGCCTCGGCCATaGCGAGGACAGGTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKRRPRP*RGQVRS
Trigger: TGACCTGACCTGTCCTCGCCATGGCCGAGGCCGCCT...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATAGGCTCACAAGCAGCTaGAAGAGCAGCCGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDRLTSS*KSSRFQ
Trigger: CTGGAAGCGGCTGCTCTTCCAGCTGCTTGTGAGCCT...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAACCCGGCGGAACAAGATaGCCGGGGGCTCCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKPGGTR*PGAPVQ
Trigger: CTGAACGGGAGCCCCCGGCCATCTTGTTCCGCCGGG...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGCTACCACCGACACGATaGCTGCCTCCGGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKLPPTR*LPPGSA
Trigger: GGCTGAGCCCGGAGGCAGCCATCGTGTCGGTGGTAG...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGCCTTCTCGGAGGAGGTaGCAGGGTCCAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKPSRRR*QGPAQS
Trigger: GCTCTGGGCTGGACCCTGCCACCTCCTCCGAGAAGG...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTGCTGCCCTTGGCCTTaGCAGAGGCCTTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVCCPWP*QRPSRR
Trigger: CCTCCGAGAAGGCCTCTGCCAAGGCCAAGGGCAGCA...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp ACTGCACGAACATCTCCTGGTAGTCCTGGAACGTGTCCTCGTACTTCTTCATACCAGCCAGTGAGGATGTaGCCCCTGACGAGAGGAATT +
Preference number: 4 (lower is better)
Translates to: TARTSPGSPGTCPRTSSYQPVRM*PLTRGI
Trigger: AATTCCTCTCGTCAGGGGCCACATCCTCACTGGCTG...GTATGAAGAAGTACGAGGACACGTTCCAGGACTACCAGGAGATGTTCGTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCGGAGGCTGTAAAAGCTaGCGTCTCCCGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFGGCKS*RLPAGA
Trigger: AGCCCCTGCCGGGAGACGCCAGCTTTTACAGCCTCC...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTTGCCGCTCGAGGCTCTaGGACAGGGACAGGACGAGC +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICCRSRL*DRDRTS
Trigger: GCTCGTCCTGTCCCTGTCCCAGAGCCTCGAGCGGCA...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAACCTGCACCTGCTTGCTaGCCGCCCCCGACCCCAGAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKPAPAC*PPPTPD
Trigger: ATCTGGGGTCGGGGGCGGCCAGCAAGCAGGTGCAGG...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTCTGCCAGCTCCGGGATaGTTGGCTGGTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICLPAPG*LAGPPG
Trigger: TCCTGGAGGACCAGCCAATCATCCCGGAGCTGGCAG...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTGGAACACCTGCTGGATaGTCCCACGTGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVGTPAG*SHVLPA
Trigger: AGCTGGCAGCACGTGGGATCATCCAGCAGGTGTTCC...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAGGAGGAACTGGCGGGTaGTCAGCAGCGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKGGTGG*SAAWPA
Trigger: TGCTGGCCACGCTGCTGATCACCCGCCAGTTCCTCC...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAACGCGCTCAGCGAAGCTaGCCTTCTTCAGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKRAQRS*PSSAGA
Trigger: GGCTCCGGCTGAAGAAGGTCAGCTTCGCTGAGCGCG...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAGCCCGGTGCACAGCTTaGAGGCGTCGCTGCGGATCT +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKARCTA*RRRCGS
Trigger: AGATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGC...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTCGGCCTTCACTGCTTTaGGCAGACCCAGCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICRPSLL*ADPARR
Trigger: CCGACGAGCTGGGTCTGCGCAAAGCAGTGAAGGCCG...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCGCGCACGTTGTGGAGTaGTTCTCCCTGCTTGGCACG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFAHVVE*FSLLGT
Trigger: CGTGCCAAGCAGGGAGAAGCACTCCACAACGTGCGC...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCGTCCCCCACTTATATaGCAGCTCAGCCCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFRPPLI*QLSPSP
Trigger: CGGAGAGGGGCTGAGCTGGCATATAAGTGGGGGACG...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGCATGACGTTGTTGGGTaGCAGCAGGGACCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKHDVVG*QQGPWA
Trigger: CGCCCAGGGTCCCTGCTGGCACCCAACAACGTCATG...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATGTCATCGGTCGTGTCTaGGAAGGTCATCAGCACGTC +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDVIGRV*EGHQHV
Trigger: GACGTGCTGATGACCTTCCCAGACACGACCGATGAC...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCTCCGGGATGATTGGCTaGTCCTCCAGGAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFSGMIG*SSRKRT
Trigger: CGTGCGCTTCCTGGAGGACCAGCCAATCATCCCGGA...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCACCTCGCGCACGTTCTaGAGGAACTGGCGGGTGATC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFTSRTF*RNWRVI
Trigger: GATCACCCGCCAGTTCCTCCAGAACGTGCGCGAGGT...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGGTCGAATCGCTGTTaGAGCCGGGTTCCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKGSNRC*SRVPGP
Trigger: CGGACCCGGAACCCGGCTCCAACAGCGATTCGACCC...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAATGCTTTCCACGCGCTaGCCGAAGGGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKMLSTR*PKGRCS
Trigger: GCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCAT...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGAGGCTGTAAAAGCTaGCGTCTCCCGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICGGCKS*RLPAGA
Trigger: AGCCCCTGCCGGGAGACGCCAGCTTTTACAGCCTCC...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGCTAACTCCGCTGCTTTaGACGCGCCTCGACGCGAGG +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKLTPLL*TRLDAR
Trigger: CCTCGCGTCGAGGCGCGTCCAAAGCAGCGGAGTTAG...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGGCGTTCCTGGGAGGTaGAGAAGCGTAGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKGVPGR*RSVARS
Trigger: AGAGCGAGCTACGCTTCTTCACCTCCCAGGAACGCC...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATACATCCCGGCTTGTCTaGTCAGCCTCTGTGAATGTG +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDTSRLV*SASVNV
Trigger: CACATTCACAGAGGCTGATCAGACAAGCCGGGATGT...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTCGGTGGTGGCGGACTTaGACGATGAGCTCGGGAATG +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICRWWRT*TMSSGM
Trigger: CATTCCCGAGCTCATCGTGCAAGTCCGCCACCACCG...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp ACTGCACGAACATCTCCTGGTAGTCCTGGAACGTGTCCTCGTACTTCTTCATACTTGGCACGCAAATTCTaGAGCCAGAAGCGGATGATG +
Preference number: 4 (lower is better)
Translates to: TARTSPGSPGTCPRTSSYLARKF*SQKRMM
Trigger: CATCATCCGCTTCTGGCTGCAGAATTTGCGTGCCAA...GTATGAAGAAGTACGAGGACACGTTCCAGGACTACCAGGAGATGTTCGTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCGATGATCCCACGTGCTaGCAGCTCCGGGATGATTGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFDDPTC*QLRDDW
Trigger: CCAATCATCCCGGAGCTGGCAGCACGTGGGATCATC...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTCTGGATGATCCCACGTaGTGCCAGCTCCGGGATGAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVLDDPT*CQLRDD
Trigger: ATCATCCCGGAGCTGGCAGCACGTGGGATCATCCAG...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGCGGTTCTGCCGTCTCTaGCTACGGGTCGAATCGCTG +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKRFCRL*LRVESL
Trigger: CAGCGATTCGACCCGTAGGCAGAGACGGCAGAACCG...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTCGGTTCTGCCGTCTCTaGCTACGGGTCGAATCGCTG +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICRFCRL*LRVESL
Trigger: CAGCGATTCGACCCGTAGGCAGAGACGGCAGAACCG...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGCAAGACGACCGGTTCTaGCGTCTCTGCCTACGGGTC +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKQDDRF*RLCLRV
Trigger: GACCCGTAGGCAGAGACGGCAGAACCGGTCGTCTTG...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAACAGGCTCAGCCCGGGTaGCACCAAAGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKQAQPG*HQRGRA
Trigger: AGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTG...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAATCTGAACCCGGCTGCTaGCACTGCTGGGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKSEPGC*HCWGSH
Trigger: ATGGGACCCCCAGCAGTGGCAGCAGCCGGGTTCAGA...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCATGCCCACGCGGATGTaGTTCAGCAGCCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFMPTRM*FSSHSS
Trigger: GCTGCTATGGCTGCTGAACCACATCCGCGTGGGCAT...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTATCACCTTCTGCCACTaGCCGATGCTTTCCACGCGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVITFCH*PMLSTR
Trigger: GCGCGTGGAAAGCATCGGCCAGTGGCAGAAGGTGAT...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCGGGGATGGCCACGTaGATGAGGTACTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVSGMAT*MRYLRS
Trigger: GCTCCTCAAGTACCTCATCCACGTGGCCATCCCCGA...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGAAGGCCTCGCGGCGCTaGTACTCCAGCTTGGCCATT +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKKASRR*YSSLAI
Trigger: AATGGCCAAGCTGGAGTACCAGCGCCGCGAGGCCTT...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGCATGGTGCTCTGCATaGCGCTGTCGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKAWCSA*RCRSSS
Trigger: GGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGC...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGCGTTCCTGGGAGGTaGAGAAGCGTAGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKGVPGR*RSVARS
Trigger: AGAGCGAGCTACGCTTCTTCACCTCCCAGGAACGCC...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAACACGGCCTGCACCCATaGCTTCATGAGGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKHGLHP*LHEAVQ
Trigger: CTGAACCGCCTCATGAAGTCATGGGTGCAGGCCGTG...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTCTGCTTCAACTTCATaGCGTTGTTGGGTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDSASTS*RCWVPA
Trigger: TGCTGGCACCCAACAACGTCATGAAGTTGAAGCAGA...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAGCGCACGTTGTGGAGTaGTTCTCCCTGCTTGGCACG +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKAHVVE*FSLLGT
Trigger: CGTGCCAAGCAGGGAGAAGCACTCCACAACGTGCGC...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCTGGACAGGGAACACCTaGTGGATGATCCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFWTGNT*WMIPRA
Trigger: AGCACGTGGGATCATCCAGCAGGTGTTCCCTGTCCA...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAACGTCCCCCACTTATATaGCAGCTCAGCCCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKRPPLI*QLSPSP
Trigger: CGGAGAGGGGCTGAGCTGGCATATAAGTGGGGGACG...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTAGCCATAGCAGCGTGTaGTCATCGGTCGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICSHSSV*SSVVSG
Trigger: CCCAGACACGACCGATGACCACACGCTGCTATGGCT...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTATGCTCTGGCGTTCCTaGGAGGTGAAGAAGCGTAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVMLWRS*EVKKRS
Trigger: GCTACGCTTCTTCACCTCCCAGGAACGCCAGAGCAT...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCAGGAAGCGCACGTTGTaGAGTGCTTCTCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFRKRTL*SASPCL
Trigger: CAAGCAGGGAGAAGCACTCCACAACGTGCGCTTCCT...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAACAGCTCCGGGATGATTaGCTGGTCCTCCAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKQLRDD*LVLQEA
Trigger: CGCTTCCTGGAGGACCAGCCAATCATCCCGGAGCTG...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTAGAATACGCTGCTCGTaGACAGGGAACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVRIRCS*TGNTCW
Trigger: CCAGCAGGTGTTCCCTGTCCACGAGCAGCGTATTCT...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTAGGCTCACAAGCAGCTaGAAGAGCAGCCGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICRLTSS*KSSRFQ
Trigger: CTGGAAGCGGCTGCTCTTCCAGCTGCTTGTGAGCCT...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAACAGCATGGAAGGCTTTaGGCGGTGAGTGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKQHGRL*AVSGCA
Trigger: AGCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTG...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTAAGAGCTTGCCAGCATaGAAGGCTTTGGGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVKSLPA*KALGGE
Trigger: CTCACCGCCCAAAGCCTTCCATGCTGGCAAGCTCTT...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTTCTCATACGTGGCGGTaGCAAAGAAGGCGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICSHTWR*QRRRRH
Trigger: GTGCCTACGCCTTCTTTGTCACCGCCACGTATGAGA...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCGCACCCATGACTTCATaGGGCGGTTCAGAATACGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFAPMTS*GGSEYA
Trigger: AGCGTATTCTGAACCGCCTCATGAAGTCATGGGTGC...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTTCGACCAGATCACGTTaGAGAGGGCAAAGACCACGC +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICSTRSR*RGQRPR
Trigger: GCGTGGTCTTTGCCCTCTTCAACGTGATCTGGTCGA...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTAAACTCGGCCTTCACTaGTTTGCGCAGACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICKLGLH*FAQTQL
Trigger: GAGCTGGGTCTGCGCAAAGCAGTGAAGGCCGAGTTT...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGAAACTCGGCCTTCACTaGTTTGCGCAGACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKKLGLH*FAQTQL
Trigger: GAGCTGGGTCTGCGCAAAGCAGTGAAGGCCGAGTTT...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGCGGTTCAGAATACGCTaGTCGTGGACAGGGAACACC +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKRFRIR*SWTGNT
Trigger: GGTGTTCCCTGTCCACGAGCAGCGTATTCTGAACCG...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGAGGAAGCGCACGTTGTaGAGTGCTTCTCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKRKRTL*SASPCL
Trigger: CAAGCAGGGAGAAGCACTCCACAACGTGCGCTTCCT...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTAGAATACGCTGCTCGTaGACAGGGAACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICRIRCS*TGNTCW
Trigger: CCAGCAGGTGTTCCCTGTCCACGAGCAGCGTATTCT...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAACGTTCTGGAGGAACTaGCGGGTGATCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKTFWRN*RVISSV
Trigger: CACGCTGCTGATCACCCGCCAGTTCCTCCAGAACGT...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTCAGCCAGTGAGGATGTaGCCCCTGACGAGAGGAATT +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICQPVRM*PLTRGI
Trigger: AATTCCTCTCGTCAGGGGCCACATCCTCACTGGCTG...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTAAGGAAAACGGCAGATaGGGGGCACCGACCAATACT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVKENGR*GAPTNT
Trigger: AGTATTGGTCGGTGCCCCCCATCTGCCGTTTTCCTT...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAATCTCATACGTGGCGGTaGCAAAGAAGGCGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKSHTWR*QRRRRH
Trigger: GTGCCTACGCCTTCTTTGTCACCGCCACGTATGAGA...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCAGCGCTCCATGTCCTTaGGGTAGAAACCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFSAPCP*GRNRCR
Trigger: TCTACATCGGTTTCTACCTCAAGGACATGGAGCGCT...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTTGGAGTGCTTCTCCCTaGTTGGCACGCAAATTCTGC +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICWSASP*LARKFC
Trigger: GCAGAATTTGCGTGCCAAGCAGGGAGAAGCACTCCA...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTGAGAGGAATTTGCCCTaGAGTGGGATGATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVERNLP*SGMICF
Trigger: GAAGCAGATCATCCCACTGCAGGGCAAATTCCTCTC...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTAGACCCGAAGACAGCTaGGTATACCATAGCCGACGT +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICRPEDS*VYHSRR
Trigger: ACGTCGGCTATGGTATACCCAGCTGTCTTCGGGTCT...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGAAGGAAAACGGCAGATaGGGGGCACCGACCAATACT +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKKENGR*GAPTNT
Trigger: AGTATTGGTCGGTGCCCCCCATCTGCCGTTTTCCTT...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATAATTTTCCATGTCATTaGGCCAGATGGCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDNFPCH*ARWLAS
Trigger: AGAAGCTAGCCATCTGGCTCAATGACATGGAAAATT...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGCCGCCCCTGTGAATaGCTGATATTGCATATGAGA +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICGRPCE*LILHMR
Trigger: TCTCATATGCAATATCAGTCATTCACAGGGGCGGCC...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGTTTTCACACACGGCCTaGACCCATGACTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKFSHTA*THDFMR
Trigger: CCTCATGAAGTCATGGGTGCAGGCCGTGTGTGAAAA...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGATGTCATCTAGAGGCTaGTTTTCACACACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKMSSRG*FSHTAC
Trigger: GCAGGCCGTGTGTGAAAACCAGCCTCTAGATGACAT...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAATCTGATCAGCCTCTGTaGATGTGTACAGGACAGACC +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKSDQPL*MCTGQT
Trigger: GGTCTGTCCTGTACACATTCACAGAGGCTGATCAGA...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGCTCAGGTACGAGTTaGCAAACTGGAACAGGACAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKGSGTS*QTGTGQ
Trigger: TTGTCCTGTTCCAGTTTGTCAACTCGTACCTGAGCC...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTCGATTAAGTAGCAGTTaGCCACAATCGCTAGGACAC +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICRLSSS*PQSLGH
Trigger: GTGTCCTAGCGATTGTGGTCAACTGCTACTTAATCG...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAATCTGCTTCAACTTCATaGCGTTGTTGGGTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKSASTS*RCWVPA
Trigger: TGCTGGCACCCAACAACGTCATGAAGTTGAAGCAGA...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAATTGGCACGCAAATTCTaGAGCCAGAAGCGGATGATG +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKLARKF*SQKRMM
Trigger: CATCATCCGCTTCTGGCTGCAGAATTTGCGTGCCAA...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCGCCAGGCGAAGTACATaGCAATTTTCACACCAAAGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFARRST*QFSHQS
Trigger: ACTTTGGTGTGAAAATTGCCATGTACTTCGCCTGGC...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTTCTGTTGGATTTGTaGGTTTCCTTTCGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDFLLDL*VSFRLE
Trigger: TTCCAAACGAAAGGAAACCCACAAATCCAACAGAAA...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
3UTR CAA 72 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTaGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVCFL*DLWVSFRLERK
Trigger: TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAATGCAGTGGGATGATCTaGTTCAACTTCATGACGTTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKCSGMI*FNFMTL
Trigger: CAACGTCATGAAGTTGAAGCAGATCATCCCACTGCA...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGAATTTGCCCTGCAGTaGGATGATCTGCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKEFALQ*DDLLQL
Trigger: AAGTTGAAGCAGATCATCCCACTGCAGGGCAAATTC...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAGGGTTTCCTTTCGTTTaGAAAGGAAAACGGCAGATG +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKGFPFV*KGKRQM
Trigger: CATCTGCCGTTTTCCTTTCCAAACGAAAGGAAACCC...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAAATTTTCCATGTCATTaGGCCAGATGGCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKNFPCH*ARWLAS
Trigger: AGAAGCTAGCCATCTGGCTCAATGACATGGAAAATT...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CCA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTTACGAGTTGACAAACTaGAACAGGACAACTTTGATG +
Preference number: 4 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICYELTN*NRTTLM
Trigger: CATCAAAGTTGTCCTGTTCCAGTTTGTCAACTCGTA...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS GCA 90 bp TACGGACGGCCCGGGCGACGGGGAGCCGCGGGCTCATGGGGCCGGTaGAGCCGCGGAGCGCGCGGGAGGAGGAGACAAAGGCCGCGCCCG +
Preference number: 5 (lower is better)
Translates to: YGRPGRRGAAGSWGR*SRGARGRRRQRPRP
Trigger: CGGGCGCGGCCTTTGTCTCCTCCTCCCGCGCGCTCCGCGGCTGCACCGGCCCCATGAGCCCGCGGCTCCCCGTCGCCCGGGCCGTCCGTA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000630631.1
CDS CCA 90 bp CGCCCTCCAGGGACGTGCCCCCGGCGCCGGAGGCGGCCTCGGCCATaGCGAGGACAGGTCAGGTCAGGGGCTACGGACGGCCCGGGCGAC +
Preference number: 5 (lower is better)
Translates to: RPPGTCPRRRRRPRP*RGQVRSGATDGPGD
Trigger: GTCGCCCGGGCCGTCCGTAGCCCCTGACCTGACCTGTCCTCGCCATGGCCGAGGCCGCCTCCGGCGCCGGGGGCACGTCCCTGGAGGGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000600711.1
ENST00000630631.1
CDS CCA 90 bp GTCAGGGGCTACGGACGGCCCGGGCGACGGGGAGCCGCGGGCTCATaGGGCCGGTGCAGCCGCGGAGCGCGCGGGAGGAGGAGACAAAGG +
Preference number: 5 (lower is better)
Translates to: VRGYGRPGRRGAAGS*GRCSRGARGRRRQR
Trigger: CCTTTGTCTCCTCCTCCCGCGCGCTCCGCGGCTGCACCGGCCCCATGAGCCCGCGGCTCCCCGTCGCCCGGGCCGTCCGTAGCCCCTGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000630631.1
CDS CCA 90 bp CAGGCCCAGCGCGTCTCCACCCCACCGCGGGCTCTGTCGGTGCACTaGGCCGCGTGCGCCCCCAGCCGCCTGCACCTGCTTGCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: QAQRVSTPPRALSVH*AACAPSRLHLLAGR
Trigger: GCGGCCAGCAAGCAGGTGCAGGCGGCTGGGGGCGCACGCGGCCCAGTGCACCGACAGAGCCCGCGGTGGGGTGGAGACGCGCTGGGCCTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597643.5
ENST00000630631.1
CDS GCA 90 bp ACAGCCACGCTGCCCACCCCGGCGAGGACCCACGGGCTCGCCACCTaGCCGTACTTTGGCCCGGGCCGCGAGCAGGAGGCCCCGGAGGGA +
Preference number: 5 (lower is better)
Translates to: TATLPTPARTHGLAT*PYFGPGREQEAPEG
Trigger: TCCCTCCGGGGCCTCCTGCTCGCGGCCCGGGCCAAAGTACGGGCAGGTGGCGAGCCCGTGGGTCCTCGCCGGGGTGGGCAGCGTGGCTGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597643.5
ENST00000630631.1
CDS GCA 90 bp ACGGGCAGGCCCAGCGCGTCTCCACCCCACCGCGGGCTCTGTCGGTaGACTGGGCCGCGTGCGCCCCCAGCCGCCTGCACCTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TGRPSASPPHRGLCR*TGPRAPPAACTCLL
Trigger: CAGCAAGCAGGTGCAGGCGGCTGGGGGCGCACGCGGCCCAGTGCACCGACAGAGCCCGCGGTGGGGTGGAGACGCGCTGGGCCTGCCCGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597643.5
ENST00000630631.1
CDS-3UTR CAA 90 bp CCCTCGCCCCCGGCCCGGCGGAACAAGATGGCCGGGGGCTCCCGTTCAGGGCTGCGGGTCGAATCGCTGTaGGAGCCGGGTTCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: PSPPARRNKMAGGSRSGLRVESL*EPGSGS
Trigger: GGACCCGGAACCCGGCTCCAACAGCGATTCGACCCG...CAGCCCTGAACGGGAGCCCCCGGCCATCTTGTTCCGCCGGGCCGGGGGCGAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS CCA 90 bp GCGCCTCGACGCGAGGCCCCCAGCGCTCAGCCACAAAATACAGCCTaGCACGCGCAGCGCTCCTCGCCCACCTCACGGGCAGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: APRREAPSAQPQNTA*HAQRSSPTSRAGPA
Trigger: CGCTGGGCCTGCCCGTGAGGTGGGCGAGGAGCGCTGCGCGTGCCAGGCTGTATTTTGTGGCTGAGCGCTGGGGGCCTCGCGTCGAGGCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CAA 90 bp TTGACCAGGGCGCACAGCGCCGCCAGGGGGAAGGCGGACGAGAAGAGCACAACGTCCGGCGGGGGCCTCTaGCCACGCTCGCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LTRAHSAARGKADEKSTTSGGGL*PRSPSR
Trigger: CCTGGAGGGCGAGCGTGGCAAGAGGCCCCCGCCGGA...CGTTGTGCTCTTCTCGTCCGCCTTCCCCCTGGCGGCGCTGTGCGCCCTGGTCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CAA 90 bp GCGCTGGCCGAAGGGCCGCTGCAGCCCGGTGCACAGCTTGAAGGCGTCGCTGCGGTGCTGCCCTTGGCCTaGGCAGAGGCCTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: ALAEGPLQPGAQLEGVAAVLPLA*AEAFSE
Trigger: CTCCGAGAAGGCCTCTGCCAAGGCCAAGGGCAGCAC...CGCAGCGACGCCTTCAAGCTGTGCACCGGGCTGCAGCGGCCCTTCGGCCAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS CCA 90 bp TTCCCGTTCTGGGAAGCCGAGCTCAGGAGAGCCGCATCTGGGCACTaGGCGGGCGGGCGGGCGGGCTTGGGTACCTGGGAAGGTCATCAG +
Preference number: 5 (lower is better)
Translates to: FPFWEAELRRAASGH*AGGRAGLGTWEGHQ
Trigger: CTGATGACCTTCCCAGGTACCCAAGCCCGCCCGCCCGCCCGCCCAGTGCCCAGATGCGGCTCTCCTGAGCTCGGCTTCCCAGAACGGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS CCA 90 bp CTACGTATTCCCGTTCTGGGAAGCCGAGCTCAGGAGAGCCGCATCTaGGCACTGGGCGGGCGGGCGGGCGGGCTTGGGTACCTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: LRIPVLGSRAQESRI*ALGGRAGGLGYLGR
Trigger: CCTTCCCAGGTACCCAAGCCCGCCCGCCCGCCCGCCCAGTGCCCAGATGCGGCTCTCCTGAGCTCGGCTTCCCAGAACGGGAATACGTAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS CCA 90 bp GCTCCTGCCACGAGGGGGCCCAAGGCCTCCTACGTATTCCCGTTCTaGGAAGCCGAGCTCAGGAGAGCCGCATCTGGGCACTGGGCGGGC +
Preference number: 5 (lower is better)
Translates to: APATRGPKASYVFPF*EAELRRAASGHWAG
Trigger: GCCCGCCCAGTGCCCAGATGCGGCTCTCCTGAGCTCGGCTTCCCAGAACGGGAATACGTAGGAGGCCTTGGGCCCCCTCGTGGCAGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS-3UTR CAA 90 bp GGCGCCGGTACAGGTGCGGCTGCAGGACCTCGCGCACGTTCTGGAGGAACTGGCAGCCCGGTGCACAGCTaGAAGGCGTCGCTGCGGATC +
Preference number: 5 (lower is better)
Translates to: GAGTGAAAGPRARSGGTGSPVHS*KASLRI
Trigger: GATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCT...GCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CAA 90 bp GCTCCCGCCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCCGGATCTCAATGAGGTaGTTGACCAGGGCGCACAGC +
Preference number: 5 (lower is better)
Translates to: APAGHGALHGAVAPPPPARISMR*LTRAHS
Trigger: GCTGTGCGCCCTGGTCAACAACCTCATTGAGATCCG...GGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS GCA 90 bp AGGAGAAGCCGCGGGTGCCCCCGCCAAACTCGGCCTTCACTGCTTTaGGCAGACCCAGCTCGTCGGCCCCTCGGAGTAGGCTCTCATACG +
Preference number: 5 (lower is better)
Translates to: RRSRGCPRQTRPSLL*ADPARRPLGVGSHT
Trigger: CGTATGAGAGCCTACTCCGAGGGGCCGACGAGCTGGGTCTGCGCAAAGCAGTGAAGGCCGAGTTTGGCGGGGGCACCCGCGGCTTCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 90 bp CCCAGGCGCCGGTACAGGTGCGGCTGCAGGACCTCGCGCACGTTCTaGAGGAACTGGCGGGTGATCAGCAGCGTGGCCAGCATCTCTTTC +
Preference number: 5 (lower is better)
Translates to: PRRRYRCGCRTSRTF*RNWRVISSVASISF
Trigger: GAAAGAGATGCTGGCCACGCTGCTGATCACCCGCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000159087.7
CDS-3UTR CAA 90 bp CCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCCGCCGCCTGCGGGTGACTTGAGGAACTaGAAGCTGAGGAAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: PGMVLCMALSLLLLPPPAGDLRN*KLRKAG
Trigger: GCCTGCCTTCCTCAGCTTCAAGTTCCTCAAGTCACC...CGCAGGCGGCGGGAGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS TCA 90 bp CAGCGAGAGGCCAGGGACAGGGGACTCGCCTCTCATACGTGGCGGTaGCAAAGAAGGCGTAGGCACGCGTGTGGCGGTGGTGGCGGACTT +
Preference number: 5 (lower is better)
Translates to: QREARDRGLASHTWR*QRRRRHACGGGGGL
Trigger: AAGTCCGCCACCACCGCCACACGCGTGCCTACGCCTTCTTTGTCACCGCCACGTATGAGAGGCGAGTCCCCTGTCCCTGGCCTCTCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS GCA 90 bp GGTCATCGGTCGTGTCTGCCAAGGGGCACAGGGACCGATGGCTCCTaGCACGAGGGGGCCCAAGGCCTCCTACGTATTCCCGTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: GHRSCLPRGTGTDGS*HEGAQGLLRIPVLG
Trigger: TCCCAGAACGGGAATACGTAGGAGGCCTTGGGCCCCCTCGTGGCAGGAGCCATCGGTCCCTGTGCCCCTTGGCAGACACGACCGATGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS CCA 90 bp AGCGTGTGGTCATCGGTCGTGTCTGCCAAGGGGCACAGGGACCGATaGCTCCTGCCACGAGGGGGCCCAAGGCCTCCTACGTATTCCCGT +
Preference number: 5 (lower is better)
Translates to: SVWSSVVSAKGHRDR*LLPRGGPRPPTYSR
Trigger: ACGGGAATACGTAGGAGGCCTTGGGCCCCCTCGTGGCAGGAGCCATCGGTCCCTGTGCCCCTTGGCAGACACGACCGATGACCACACGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS-3UTR CAA 90 bp GGCGCCGGTACAGGTGCGGCTGCAGGACCTCGCGCACGTTCTGGAGGAACTGGCATCTCAATGAGGTTGTaGACCAGGGCGCACAGCGCC +
Preference number: 5 (lower is better)
Translates to: GAGTGAAAGPRARSGGTGISMRL*TRAHSA
Trigger: GGCGCTGTGCGCCCTGGTCAACAACCTCATTGAGAT...GCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGCAGCCGCACCTGTACCGGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CAA 90 bp AATCATGCTCCCGCCGGGCATGGTGCTCTGCATGGCGCTGTCGCTCCTCCTCCTCCAGCATGGAAGGCTTaGGGCGGTGAGTGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: NHAPAGHGALHGAVAPPPPAWKA*GGEWLR
Trigger: GCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGG...AGGAGGAGGAGCGACAGCGCCATGCAGAGCACCATGCCCGGCGGGAGCATGATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS CCA 90 bp TGCACCTGGCAGCCTTTGGGACAAACGCAGGGCGGCTGGATAGCATaGTTGGCACTTGGTAGAGCGGGGAGTCGGGTGGCAGGCTCAGCG +
Preference number: 5 (lower is better)
Translates to: CTWQPLGQTQGGWIA*LALGRAGSRVAGSA
Trigger: CGCTGAGCCTGCCACCCGACTCCCCGCTCTACCAAGTGCCAACCATGCTATCCAGCCGCCCTGCGTTTGTCCCAAAGGCTGCCAGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS-3UTR CAA 90 bp CCTTCTGCCACTGGCCGATGCTTTCCACGCGCTGGCCGAAGGGCCGCTGCAGCCAACTTCATGACGTTGTaGGGTGCCAGCAGGGACCCT +
Preference number: 5 (lower is better)
Translates to: PSATGRCFPRAGRRAAAANFMTL*GASRDP
Trigger: AGGGTCCCTGCTGGCACCCAACAACGTCATGAAGTT...GGCTGCAGCGGCCCTTCGGCCAGCGCGTGGAAAGCATCGGCCAGTGGCAGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS TCA 90 bp AGAAGGCGTAGGCACGCGTGTGGCGGTGGTGGCGGACTTGCACGATaGGCTCGGGAATGCCCACGCGGATGTGGTTCAGCAGCCATAGCA +
Preference number: 5 (lower is better)
Translates to: RRRRHACGGGGGLAR*ARECPRGCGSAAIA
Trigger: TGCTATGGCTGCTGAACCACATCCGCGTGGGCATTCCCGAGCTCATCGTGCAAGTCCGCCACCACCGCCACACGCGTGCCTACGCCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000600711.1
ENST00000630631.1
CDS CCA 90 bp TCGGGAATGCCCACGCGGATGTGGTTCAGCAGCCATAGCAGCGTGTaGTCATCGGTCGTGTCTGCCAAGGGGCACAGGGACCGATGGCTC +
Preference number: 5 (lower is better)
Translates to: SGMPTRMWFSSHSSV*SSVVSAKGHRDRWL
Trigger: GAGCCATCGGTCCCTGTGCCCCTTGGCAGACACGACCGATGACCACACGCTGCTATGGCTGCTGAACCACATCCGCGTGGGCATTCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS-3UTR CAA 90 bp CAGCCCGGGATATCGGGGATGGCCACGTGGATGAGGTACTTGAGGAGCAGAGCGGCGGTGGTGGCGGACTaGCACGATGAGCTCGGGAAT +
Preference number: 5 (lower is better)
Translates to: QPGISGMATWMRYLRSRAAVVAD*HDELGN
Trigger: ATTCCCGAGCTCATCGTGCAAGTCCGCCACCACCGC...CGCTCTGCTCCTCAAGTACCTCATCCACGTGGCCATCCCCGATATCCCGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CAA 90 bp CCAGGGCCTCGTCCACCGGCCCACTCCTCTGAACCCGGCTGCTGCCACTGCTGGAGGCTCAGGTACGAGTaGACAAACTGGAACAGGACA +
Preference number: 5 (lower is better)
Translates to: PGPRPPAHSSEPGCCHCWRLRYE*TNWNRT
Trigger: TGTCCTGTTCCAGTTTGTCAACTCGTACCTGAGCCT...CCAGCAGTGGCAGCAGCCGGGTTCAGAGGAGTGGGCCGGTGGACGAGGCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CAA 90 bp ATGACGTTGTTGGGTGCCAGCAGGGACCCTGGGCGCTTGGGCCGTTCAGGCCCGCCAAAGGGGAAGAGCTaGCCAGCATGGAAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: MTLLGASRDPGRLGRSGPPKGKS*PAWKAL
Trigger: CAAAGCCTTCCATGCTGGCAAGCTCTTCCCCTTTGG...CGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCTGCTGGCACCCAACAACGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS CCA 90 bp TGGTGGCGGACTTGCACGATGAGCTCGGGAATGCCCACGCGGATGTaGTTCAGCAGCCATAGCAGCGTGTGGTCATCGGTCGTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: WWRTCTMSSGMPTRM*FSSHSSVWSSVVSG
Trigger: CCCAGACACGACCGATGACCACACGCTGCTATGGCTGCTGAACCACATCCGCGTGGGCATTCCCGAGCTCATCGTGCAAGTCCGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 90 bp TGGTGGCGGACTTGCACGATGAGCTCGGGAATGCCCACGCGGATGTaGTTCAGCAGCCATAGCAGCGTGTGGTCATCGGTCGTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: WWRTCTMSSGMPTRM*FSSHSSVWSSVVSA
Trigger: GGCAGACACGACCGATGACCACACGCTGCTATGGCTGCTGAACCACATCCGCGTGGGCATTCCCGAGCTCATCGTGCAAGTCCGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS-3UTR CAA 90 bp GACCCAGGCTCAGCCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATGGAAGCGGGTCTCGGGTGACTaGAGGAACTTGAAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: DPGSARVPPKGKSLPAWKRVSGD*RNLKLR
Trigger: CCTCAGCTTCAAGTTCCTCAAGTCACCCGAGACCCG...CTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CAA 90 bp GACCCAGGCTCAGCCCGGGTGCCACCAAAGGGGAAGAGCTTGCCAGCATGGAAGAGTGCTTCTCCCTGCTaGGCACGCAAATTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: DPGSARVPPKGKSLPAWKSASPC*ARKFCS
Trigger: GCTGCAGAATTTGCGTGCCAAGCAGGGAGAAGCACT...CTTCCATGCTGGCAAGCTCTTCCCCTTTGGTGGCACCCGGGCTGAGCCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS GCA 90 bp CACACGGCCTGCACCCATGACTTCATGAGGCGGTTCAGAATACGCTaGTCGTGGACAGGGAACACCTGCTGGATGATCCCACGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: HTACTHDFMRRFRIR*SWTGNTCWMIPRAA
Trigger: GGCAGCACGTGGGATCATCCAGCAGGTGTTCCCTGTCCACGAGCAGCGTATTCTGAACCGCCTCATGAAGTCATGGGTGCAGGCCGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 90 bp GCCAGCTCCGGGATGATTGGCTGGTCCTCCAGGAAGCGCACGTTGTaGAGTGCTTCTCCCTGCTTGGCACGCAAATTCTGCAGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: ASSGMIGWSSRKRTL*SASPCLARKFCSQK
Trigger: CTTCTGGCTGCAGAATTTGCGTGCCAAGCAGGGAGAAGCACTCCACAACGTGCGCTTCCTGGAGGACCAGCCAATCATCCCGGAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 90 bp GCCTGCACCCATGACTTCATGAGGCGGTTCAGAATACGCTGCTCGTaGACAGGGAACACCTGCTGGATGATCCCACGTGCTGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ACTHDFMRRFRIRCS*TGNTCWMIPRAASS
Trigger: GGAGCTGGCAGCACGTGGGATCATCCAGCAGGTGTTCCCTGTCCACGAGCAGCGTATTCTGAACCGCCTCATGAAGTCATGGGTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS GCA 90 bp TTCATGAGGCGGTTCAGAATACGCTGCTCGTGGACAGGGAACACCTaGTGGATGATCCCACGTGCTGCCAGCTCCGGGATGATTGGCTGG +
Preference number: 5 (lower is better)
Translates to: FMRRFRIRCSWTGNT*WMIPRAASSGMIGW
Trigger: CCAGCCAATCATCCCGGAGCTGGCAGCACGTGGGATCATCCAGCAGGTGTTCCCTGTCCACGAGCAGCGTATTCTGAACCGCCTCATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS-3UTR CAA 90 bp TTGACCAGGGCGCACAGCGCCGCCAGGGGGAAGGCGGACGAGAAGAGCACAACGTGGAACAGGACAACTTaGATGATGAGGTGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LTRAHSAARGKADEKSTTWNRTT*MMRCFS
Trigger: TGAGAAGCACCTCATCATCAAAGTTGTCCTGTTCCA...CGTTGTGCTCTTCTCGTCCGCCTTCCCCCTGGCGGCGCTGTGCGCCCTGGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS GCA 90 bp AAGCGCACGTTGTGGAGTGCTTCTCCCTGCTTGGCACGCAAATTCTaGAGCCAGAAGCGGATGATGCTCTGGCGTTCCTGGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: KRTLWSASPCLARKF*SQKRMMLWRSWEVK
Trigger: CTTCACCTCCCAGGAACGCCAGAGCATCATCCGCTTCTGGCTGCAGAATTTGCGTGCCAAGCAGGGAGAAGCACTCCACAACGTGCGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS GCA 90 bp ATTGGCTGGTCCTCCAGGAAGCGCACGTTGTGGAGTGCTTCTCCCTaGTTGGCACGCAAATTCTGCAGCCAGAAGCGGATGATGCTCTGG +
Preference number: 5 (lower is better)
Translates to: IGWSSRKRTLWSASP*LARKFCSQKRMMLW
Trigger: CCAGAGCATCATCCGCTTCTGGCTGCAGAATTTGCGTGCCAAGCAGGGAGAAGCACTCCACAACGTGCGCTTCCTGGAGGACCAGCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGTCCGGCGGGGGCCTCTaGCCACGCTCGCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKSGGGL*PRSPSR
Trigger: CCTGGAGGGCGAGCGTGGCAAGAGGCCCCCGCCGGA...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGGAACGTGTCCTCGTACTTCTTCATACAGCTCTCCAGCTCTGCCTGGGTGAGCAGCGCATTTTGCATTTaGGAGACCGGCCGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: WNVSSYFFIQLSSSAWVSSAFCI*ETGRPC
Trigger: ACAGGGGCGGCCGGTCTCCAAAATGCAAAATGCGCT...GCTCACCCAGGCAGAGCTGGAGAGCTGTATGAAGAAGTACGAGGACACGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCCACCTGCCCGTACTTaGGCCCGGGCCGCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFPPART*ARAASR
Trigger: CCTGCTCGCGGCCCGGGCCAAAGTACGGGCAGGTGG...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS TCA 90 bp CATCTAGAGGCTGGTTTTCACACACGGCCTGCACCCATGACTTCATaGGGCGGTTCAGAATACGCTGCTCGTGGACAGGGAACACCTGCT +
Preference number: 5 (lower is better)
Translates to: HLEAGFHTRPAPMTS*GGSEYAARGQGTPA
Trigger: AGCAGGTGTTCCCTGTCCACGAGCAGCGTATTCTGAACCGCCTCATGAAGTCATGGGTGCAGGCCGTGTGTGAAAACCAGCCTCTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS-3UTR CAA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTAGGGACCCTGGGCGCTaGGGCCGTTCAGGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICRDPGR*GRSGPW
Trigger: CCACGGGCCTGAACGGCCCAAGCGCCCAGGGTCCCT...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGGAACGTGTCCTCGTACTTCTTCATACAGCTCTCCAGCTCTGCCTGGGTGAGCCCTGACGAGAGGAATTaGCCCTGCAGTGGGATGATC +
Preference number: 5 (lower is better)
Translates to: WNVSSYFFIQLSSSAWVSPDERN*PCSGMI
Trigger: GATCATCCCACTGCAGGGCAAATTCCTCTCGTCAGG...GCTCACCCAGGCAGAGCTGGAGAGCTGTATGAAGAAGTACGAGGACACGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CAA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATCCAGCATGGAAGGCTTaGGGCGGTGAGTGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDPAWKA*GGEWLR
Trigger: GCGCAGCCACTCACCGCCCAAAGCCTTCCATGCTGG...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATCCTAACTCCGCTGCTTaGGACGCGCCTCGACGCGAG +
Preference number: 5 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDPNSAA*DAPRRE
Trigger: CTCGCGTCGAGGCGCGTCCAAAGCAGCGGAGTTAGG...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS TCA 90 bp CTCTCCGCTTCCATTCCTCTAGGAACAGCGTCGACCAGATCACGTTaGAGAGGGCAAAGACCACGCAGGAAACATCCCGGCTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: LSASIPLGTASTRSR*RGQRPRRKHPGLSD
Trigger: ATCAGACAAGCCGGGATGTTTCCTGCGTGGTCTTTGCCCTCTTCAACGTGATCTGGTCGACGCTGTTCCTAGAGGAATGGAAGCGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 90 bp CTGATCAGCCTCTGTGAATGTGTACAGGACAGACCCGAAGACAGCTaGGTATACCATAGCCGACGTGTAGAAGCCCAGCCAGGCGAAGTA +
Preference number: 5 (lower is better)
Translates to: LISLCECVQDRPEDS*VYHSRRVEAQPGEV
Trigger: TACTTCGCCTGGCTGGGCTTCTACACGTCGGCTATGGTATACCCAGCTGTCTTCGGGTCTGTCCTGTACACATTCACAGAGGCTGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS-3UTR CAA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTCGGCCTTCACTGCTTaGCGCAGACCCAGCTCGTCG +
Preference number: 5 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDSAFTA*RRPSSS
Trigger: CGACGAGCTGGGTCTGCGCAAAGCAGTGAAGGCCGA...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp ACTGCACGAACATCTCCTGGTAGTCCTGGAACGTGTCCTCGTACTTCTTCATACTCCAGGAAGCGCACGTaGTGGAGTGCTTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: TARTSPGSPGTCPRTSSYSRKRT*WSASPC
Trigger: GCAGGGAGAAGCACTCCACAACGTGCGCTTCCTGGA...GTATGAAGAAGTACGAGGACACGTTCCAGGACTACCAGGAGATGTTCGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTGCGGTGGTGGCGGACTaGCACGATGAGCTCGGGAAT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVAVVAD*HDELGN
Trigger: ATTCCCGAGCTCATCGTGCAAGTCCGCCACCACCGC...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAACGGGTCGAATCGCTGTaGGAGCCGGGTTCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKRVESL*EPGSGS
Trigger: GGACCCGGAACCCGGCTCCAACAGCGATTCGACCCG...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGAGCCCGGTGCACAGCTaGAAGGCGTCGCTGCGGATC +
Preference number: 5 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKSPVHS*KASLRI
Trigger: GATCCGCAGCGACGCCTTCAAGCTGTGCACCGGGCT...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp ACTGCACGAACATCTCCTGGTAGTCCTGGAACGTGTCCTCGTACTTCTTCATACACGTGGATGAGGTACTaGAGGAGCAGAGCGAAGTGC +
Preference number: 5 (lower is better)
Translates to: TARTSPGSPGTCPRTSSYTWMRY*RSRAKC
Trigger: GCACTTCGCTCTGCTCCTCAAGTACCTCATCCACGT...GTATGAAGAAGTACGAGGACACGTTCCAGGACTACCAGGAGATGTTCGTGCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGTGCTGCCCTTGGCCTaGGCAGAGGCCTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKVLPLA*AEAFSE
Trigger: CTCCGAGAAGGCCTCTGCCAAGGCCAAGGGCAGCAC...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCTCCAGGAAGCGCACGTaGTGGAGTGCTTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVFSVGFVGFSRKRT*WSASPC
Trigger: GCAGGGAGAAGCACTCCACAACGTGCGCTTCCTGGA...GAAACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATGTCGACCAGATCACGTaGAAGAGGGCAAAGACCACG +
Preference number: 5 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDVDQIT*KRAKTT
Trigger: CGTGGTCTTTGCCCTCTTCAACGTGATCTGGTCGAC...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTGGGCTGAAGCGCATTTaGCATTTTGGAGACCGGCCG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVGLKRI*HFGDRP
Trigger: CGGCCGGTCTCCAAAATGCAAAATGCGCTTCAGCCC...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTGTCGACCAGATCACGTaGAAGAGGGCAAAGACCACG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVVDQIT*KRAKTT
Trigger: CGTGGTCTTTGCCCTCTTCAACGTGATCTGGTCGAC...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTATCTCAATGAGGTTGTaGACCAGGGCGCACAGCGCC +
Preference number: 5 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICISMRL*TRAHSA
Trigger: GGCGCTGTGCGCCCTGGTCAACAACCTCATTGAGAT...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGCGGATCTCAATGAGGTaGTTGACCAGGGCGCACAGC +
Preference number: 5 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKRISMR*LTRAHS
Trigger: GCTGTGCGCCCTGGTCAACAACCTCATTGAGATCCG...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTGGTGACTTGAGGAACTaGAAGCTGAGGAAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVGDLRN*KLRKAG
Trigger: GCCTGCCTTCCTCAGCTTCAAGTTCCTCAAGTCACC...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGCGGGTCTCGGGTGACTaGAGGAACTTGAAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKRVSGD*RNLKLR
Trigger: CCTCAGCTTCAAGTTCCTCAAGTCACCCGAGACCCG...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTAGTGCTTCTCCCTGCTaGGCACGCAAATTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICSASPC*ARKFCS
Trigger: GCTGCAGAATTTGCGTGCCAAGCAGGGAGAAGCACT...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGACGTGGATGAGGTACTaGAGGAGCAGAGCGAAGTGC +
Preference number: 5 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKTWMRY*RSRAKC
Trigger: GCACTTCGCTCTGCTCCTCAAGTACCTCATCCACGT...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGCCTGACGAGAGGAATTaGCCCTGCAGTGGGATGATC +
Preference number: 5 (lower is better)
Translates to: VCVCVFSVGFVGFLSFGKPDERN*PCSGMI
Trigger: GATCATCCCACTGCAGGGCAAATTCCTCTCGTCAGG...CTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTCCAAAGGGGAAGAGCTaGCCAGCATGGAAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICPKGKS*PAWKAL
Trigger: CAAAGCCTTCCATGCTGGCAAGCTCTTCCCCTTTGG...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGGCTGAAGCGCATTTaGCATTTTGGAGACCGGCCG +
Preference number: 5 (lower is better)
Translates to: CVCVCVFCWICGFPFVWKGLKRI*HFGDRP
Trigger: CGGCCGGTCTCCAAAATGCAAAATGCGCTTCAGCCC...TTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp CGCCTGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTGGAACAGGACAACTTaGATGATGAGGTGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RLFCVCVCVCVCVCFLLDWNRTT*MMRCFS
Trigger: TGAGAAGCACCTCATCATCAAAGTTGTCCTGTTCCA...ATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACAGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAAAACTTCATGACGTTGTaGGGTGCCAGCAGGGACCCT +
Preference number: 5 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKNFMTL*GASRDP
Trigger: AGGGTCCCTGCTGGCACCCAACAACGTCATGAAGTT...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTAGGCTCAGGTACGAGTaGACAAACTGGAACAGGACA +
Preference number: 5 (lower is better)
Translates to: CSVCVCVCVCVCVFCWICRLRYE*TNWNRT
Trigger: TGTCCTGTTCCAGTTTGTCAACTCGTACCTGAGCCT...ACAAATCCAACAGAAAACACACACACACACACACACACACACACACACAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTGGGTTTCCTTTCGTTaGGAAAGGAAAACGGCAGAT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCFLLDLWVWVSFR*ERKTAD
Trigger: ATCTGCCGTTTTCCTTTCCAAACGAAAGGAAACCCA...AACCCACAAATCCAACAGAAAACACACACACACACACACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTTCTGTTGGATTTGTGGGTTTCCTTTCGTTTGGAAAGGAAATGGGTTTCCTTTCGTTaGGAAAGGAAAACGGCAGAT +
Preference number: 5 (lower is better)
Translates to: VCVCFLLDLWVSFRLERKWVSFR*ERKTAD
Trigger: ATCTGCCGTTTTCCTTTCCAAACGAAAGGAAACCCA...TTTCCTTTCCAAACGAAAGGAAACCCACAAATCCAACAGAAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000597643.5
CDS GCA 72 bp CCCGGGCGACGGGGAGCCGCGGGCTCATGGGGCCGGTaGAGCCGCGGAGCGCGCGGGAGGAGGAGACAAAGG +
Preference number: 6 (lower is better)
Translates to: PGRRGAAGSWGR*SRGARGRRRQR
Trigger: CCTTTGTCTCCTCCTCCCGCGCGCTCCGCGGCTGCACCGGCCCCATGAGCCCGCGGCTCCCCGTCGCCCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000159087.7
ENST00000630631.1
CDS GCA 72 bp CCCAGCGCGTCTCCACCCCACCGCGGGCTCTGTCGGTaGACTGGGCCGCGTGCGCCCCCAGCCGCCTGCACC +
Preference number: 6 (lower is better)
Translates to: PSASPPHRGLCR*TGPRAPPAACT
Trigger: GGTGCAGGCGGCTGGGGGCGCACGCGGCCCAGTGCACCGACAGAGCCCGCGGTGGGGTGGAGACGCGCTGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597643.5
ENST00000630631.1
CDS GCA 72 bp CTGCCCACCCCGGCGAGGACCCACGGGCTCGCCACCTaGCCGTACTTTGGCCCGGGCCGCGAGCAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: LPTPARTHGLAT*PYFGPGREQEA
Trigger: GGCCTCCTGCTCGCGGCCCGGGCCAAAGTACGGGCAGGTGGCGAGCCCGTGGGTCCTCGCCGGGGTGGGCAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597643.5
ENST00000630631.1
CDS GCA 72 bp ACCCCACCGCGGGCTCTGTCGGTGCACTGGGCCGCGTaGGCCCCCAGCCGCCTGCACCTGCTTGCTGGCCGC +
Preference number: 6 (lower is better)
Translates to: TPPRALSVHWAA*APSRLHLLAGR
Trigger: GCGGCCAGCAAGCAGGTGCAGGCGGCTGGGGGCGCACGCGGCCCAGTGCACCGACAGAGCCCGCGGTGGGGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597643.5
ENST00000630631.1
CDS CCA 72 bp GGGACGTGCCCCCGGCGCCGGAGGCGGCCTCGGCCATaGCGAGGACAGGTCAGGTCAGGGGCTACGGACGGC +
Preference number: 6 (lower is better)
Translates to: GTCPRRRRRPRP*RGQVRSGATDG
Trigger: GCCGTCCGTAGCCCCTGACCTGACCTGTCCTCGCCATGGCCGAGGCCGCCTCCGGCGCCGGGGGCACGTCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000600711.1
ENST00000630631.1
CDS CCA 72 bp GGCGAGGACCCACGGGCTCGCCACCTGCCCGTACTTTaGCCCGGGCCGCGAGCAGGAGGCCCCGGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: GEDPRARHLPVL*PGPRAGGPGGR
Trigger: TCTCCCTCCGGGGCCTCCTGCTCGCGGCCCGGGCCAAAGTACGGGCAGGTGGCGAGCCCGTGGGTCCTCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597643.5
ENST00000630631.1
CDS CCA 72 bp CGCGTCTCCACCCCACCGCGGGCTCTGTCGGTGCACTaGGCCGCGTGCGCCCCCAGCCGCCTGCACCTGCTT +
Preference number: 6 (lower is better)
Translates to: RVSTPPRALSVH*AACAPSRLHLL
Trigger: AAGCAGGTGCAGGCGGCTGGGGGCGCACGCGGCCCAGTGCACCGACAGAGCCCGCGGTGGGGTGGAGACGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597643.5
ENST00000630631.1
CDS GCA 72 bp CGGAACCGCAGGGCCGCGAGCGGGACCAGCACCGCCTaGAGCTGCCGCTCGAGGCTCTGGGACAGGGACAGG +
Preference number: 6 (lower is better)
Translates to: RNRRAASGTSTA*SCRSRLWDRDR
Trigger: CCTGTCCCTGTCCCAGAGCCTCGAGCGGCAGCTGCAGGCGGTGCTGGTCCCGCTCGCGGCCCTGCGGTTCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597643.5
ENST00000630631.1
CDS CCA 72 bp CCCGTTCTGGGAAGCCGAGCTCAGGAGAGCCGCATCTaGGCACTGGGCGGGCGGGCGGGCGGGCTTGGGTAC +
Preference number: 6 (lower is better)
Translates to: PVLGSRAQESRI*ALGGRAGGLGY
Trigger: GTACCCAAGCCCGCCCGCCCGCCCGCCCAGTGCCCAGATGCGGCTCTCCTGAGCTCGGCTTCCCAGAACGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS GCA 72 bp CGCGGGTGCCCCCGCCAAACTCGGCCTTCACTGCTTTaGGCAGACCCAGCTCGTCGGCCCCTCGGAGTAGGC +
Preference number: 6 (lower is better)
Translates to: RGCPRQTRPSLL*ADPARRPLGVG
Trigger: GCCTACTCCGAGGGGCCGACGAGCTGGGTCTGCGCAAAGCAGTGAAGGCCGAGTTTGGCGGGGGCACCCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS GCA 72 bp GAAGCCGCGGGTGCCCCCGCCAAACTCGGCCTTCACTaGTTTGCGCAGACCCAGCTCGTCGGCCCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: EAAGAPAKLGLH*FAQTQLVGPSE
Trigger: CTCCGAGGGGCCGACGAGCTGGGTCTGCGCAAAGCAGTGAAGGCCGAGTTTGGCGGGGGCACCCGCGGCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 72 bp CGCGAGGCCCCCAGCGCTCAGCCACAAAATACAGCCTaGCACGCGCAGCGCTCCTCGCCCACCTCACGGGCA +
Preference number: 6 (lower is better)
Translates to: REAPSAQPQNTA*HAQRSSPTSRA
Trigger: TGCCCGTGAGGTGGGCGAGGAGCGCTGCGCGTGCCAGGCTGTATTTTGTGGCTGAGCGCTGGGGGCCTCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597643.5
CDS CAA 72 bp CCGCGGGTGCCCCCGCCAAACTCGGCCTTCACTGCTTaGCGCAGACCCAGCTCGTCGGCCCCTCGGAGTAGG +
Preference number: 6 (lower is better)
Translates to: PRVPPPNSAFTA*RRPSSSAPRSR
Trigger: CCTACTCCGAGGGGCCGACGAGCTGGGTCTGCGCAAAGCAGTGAAGGCCGAGTTTGGCGGGGGCACCCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CAA 90 bp CTCAGGAGAGCCGCATCTGGGCACTGGGCGGGCGGGCGGGCGGGCTaGGGTACCTGGGAAGGTCATCAGCACGTCGCAGTTCTCTGTAGG +
Preference number: 6 (lower is better)
Translates to: LRRAASGHWAGGRAG*GTWEGHQHVAVLCR
Trigger: CCTACAGAGAACTGCGACGTGCTGATGACCTTCCCAGGTACCCAAGCCCGCCCGCCCGCCCGCCCAGTGCCCAGATGCGGCTCTCCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS CCA 72 bp TCATCGGTCGTGTCTGCCAAGGGGCACAGGGACCGATaGCTCCTGCCACGAGGGGGCCCAAGGCCTCCTACG +
Preference number: 6 (lower is better)
Translates to: SSVVSAKGHRDR*LLPRGGPRPPT
Trigger: CGTAGGAGGCCTTGGGCCCCCTCGTGGCAGGAGCCATCGGTCCCTGTGCCCCTTGGCAGACACGACCGATGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS CAA 90 bp CAGGAGAAGCCGCGGGTGCCCCCGCCAAACTCGGCCTTCACTGCTTaGCGCAGACCCAGCTCGTCGGCCCCTCGGAGTAGGCTCTCATAC +
Preference number: 6 (lower is better)
Translates to: QEKPRVPPPNSAFTA*RRPSSSAPRSRLSY
Trigger: GTATGAGAGCCTACTCCGAGGGGCCGACGAGCTGGGTCTGCGCAAAGCAGTGAAGGCCGAGTTTGGCGGGGGCACCCGCGGCTTCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS GCA 72 bp TCGTGTCTGCCAAGGGGCACAGGGACCGATGGCTCCTaGCACGAGGGGGCCCAAGGCCTCCTACGTATTCCC +
Preference number: 6 (lower is better)
Translates to: SCLPRGTGTDGS*HEGAQGLLRIP
Trigger: GGGAATACGTAGGAGGCCTTGGGCCCCCTCGTGGCAGGAGCCATCGGTCCCTGTGCCCCTTGGCAGACACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS CAA 72 bp GAAGGCGTAGGCACGCGTGTGGCGGTGGTGGCGGACTaGCACGATGAGCTCGGGAATGCCCACGCGGATGTG +
Preference number: 6 (lower is better)
Translates to: EGVGTRVAVVAD*HDELGNAHADV
Trigger: CACATCCGCGTGGGCATTCCCGAGCTCATCGTGCAAGTCCGCCACCACCGCCACACGCGTGCCTACGCCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000600711.1
ENST00000630631.1
CDS TCA 72 bp CGTCGGCCCCTCGGAGTAGGCTCTCATACGTGGCGGTaGCAAAGAAGGCGTAGGCACGCGTGTGGCGGTGGT +
Preference number: 6 (lower is better)
Translates to: RRPLGVGSHTWR*QRRRRHACGGG
Trigger: ACCACCGCCACACGCGTGCCTACGCCTTCTTTGTCACCGCCACGTATGAGAGCCTACTCCGAGGGGCCGACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS TCA 72 bp GCCAGGGACAGGGGACTCGCCTCTCATACGTGGCGGTaGCAAAGAAGGCGTAGGCACGCGTGTGGCGGTGGT +
Preference number: 6 (lower is better)
Translates to: ARDRGLASHTWR*QRRRRHACGGG
Trigger: ACCACCGCCACACGCGTGCCTACGCCTTCTTTGTCACCGCCACGTATGAGAGGCGAGTCCCCTGTCCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS CCA 72 bp ACGAGGGGGCCCAAGGCCTCCTACGTATTCCCGTTCTaGGAAGCCGAGCTCAGGAGAGCCGCATCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: TRGPKASYVFPF*EAELRRAASGH
Trigger: GTGCCCAGATGCGGCTCTCCTGAGCTCGGCTTCCCAGAACGGGAATACGTAGGAGGCCTTGGGCCCCCTCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS CCA 72 bp CCCACGCGGATGTGGTTCAGCAGCCATAGCAGCGTGTaGTCATCGGTCGTGTCTGCCAAGGGGCACAGGGAC +
Preference number: 6 (lower is better)
Translates to: PTRMWFSSHSSV*SSVVSAKGHRD
Trigger: GTCCCTGTGCCCCTTGGCAGACACGACCGATGACCACACGCTGCTATGGCTGCTGAACCACATCCGCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS CAA 72 bp CCTTTGGGACAAACGCAGGGCGGCTGGATAGCATGGTaGGCACTTGGTAGAGCGGGGAGTCGGGTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: PLGQTQGGWIAW*ALGRAGSRVAG
Trigger: GCCTGCCACCCGACTCCCCGCTCTACCAAGTGCCAACCATGCTATCCAGCCGCCCTGCGTTTGTCCCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS CAA 90 bp GGTGACAAAGAAGGCGTAGGCACGCGTGTGGCGGTGGTGGCGGACTaGCACGATGAGCTCGGGAATGCCCACGCGGATGTGGTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: GDKEGVGTRVAVVAD*HDELGNAHADVVQQ
Trigger: CTGCTGAACCACATCCGCGTGGGCATTCCCGAGCTCATCGTGCAAGTCCGCCACCACCGCCACACGCGTGCCTACGCCTTCTTTGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000600711.1
ENST00000630631.1
CDS CAA 90 bp ACCTGGCAGCCTTTGGGACAAACGCAGGGCGGCTGGATAGCATGGTaGGCACTTGGTAGAGCGGGGAGTCGGGTGGCAGGCTCAGCGAGA +
Preference number: 6 (lower is better)
Translates to: TWQPLGQTQGGWIAW*ALGRAGSRVAGSAR
Trigger: TCTCGCTGAGCCTGCCACCCGACTCCCCGCTCTACCAAGTGCCAACCATGCTATCCAGCCGCCCTGCGTTTGTCCCAAAGGCTGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS TCA 72 bp GCAGGACCTCGCGCACGTTCTGGAGGAACTGGCGGGTaGTCAGCAGCGTGGCCAGCATCTCTTTCAAGCGCT +
Preference number: 6 (lower is better)
Translates to: AGPRARSGGTGG*SAAWPASLSSA
Trigger: AGCGCTTGAAAGAGATGCTGGCCACGCTGCTGATCACCCGCCAGTTCCTCCAGAACGTGCGCGAGGTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000159087.7
CDS GCA 72 bp CTCGTGGACAGGGAACACCTGCTGGATGATCCCACGTaGTGCCAGCTCCGGGATGATTGGCTGGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: LVDREHLLDDPT*CQLRDDWLVLQ
Trigger: CTGGAGGACCAGCCAATCATCCCGGAGCTGGCAGCACGTGGGATCATCCAGCAGGTGTTCCCTGTCCACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 72 bp CAGCCTTTGGGACAAACGCAGGGCGGCTGGATAGCATaGTTGGCACTTGGTAGAGCGGGGAGTCGGGTGGCA +
Preference number: 6 (lower is better)
Translates to: QPLGQTQGGWIA*LALGRAGSRVA
Trigger: TGCCACCCGACTCCCCGCTCTACCAAGTGCCAACCATGCTATCCAGCCGCCCTGCGTTTGTCCCAAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS GCA 72 bp GTGGACAGGGAACACCTGCTGGATGATCCCACGTGCTaGCAGCTCCGGGATGATTGGCTGGTCCTCCAGGAA +
Preference number: 6 (lower is better)
Translates to: VDREHLLDDPTC*QLRDDWLVLQE
Trigger: TTCCTGGAGGACCAGCCAATCATCCCGGAGCTGGCAGCACGTGGGATCATCCAGCAGGTGTTCCCTGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS GCA 72 bp CGGTTCAGAATACGCTGCTCGTGGACAGGGAACACCTaGTGGATGATCCCACGTGCTGCCAGCTCCGGGATG +
Preference number: 6 (lower is better)
Translates to: RFRIRCSWTGNT*WMIPRAASSGM
Trigger: CATCCCGGAGCTGGCAGCACGTGGGATCATCCAGCAGGTGTTCCCTGTCCACGAGCAGCGTATTCTGAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 72 bp CCCACGCGGATGTGGTTCAGCAGCCATAGCAGCGTGTaGTCATCGGTCGTGTCTGGGAAGGTCATCAGCACG +
Preference number: 6 (lower is better)
Translates to: PTRMWFSSHSSV*SSVVSGKVIST
Trigger: CGTGCTGATGACCTTCCCAGACACGACCGATGACCACACGCTGCTATGGCTGCTGAACCACATCCGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 72 bp TGCACCTGGCAGCCTTTGGGACAAACGCAGGGCGGCTaGATAGCATGGTTGGCACTTGGTAGAGCGGGGAGT +
Preference number: 6 (lower is better)
Translates to: CTWQPLGQTQGG*IAWLALGRAGS
Trigger: ACTCCCCGCTCTACCAAGTGCCAACCATGCTATCCAGCCGCCCTGCGTTTGTCCCAAAGGCTGCCAGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600711.1
CDS CAA 90 bp GGCTGGTCCTCCAGGAAGCGCACGTTGTGGAGTGCTTCTCCCTGCTaGGCACGCAAATTCTGCAGCCAGAAGCGGATGATGCTCTGGCGT +
Preference number: 6 (lower is better)
Translates to: GWSSRKRTLWSASPC*ARKFCSQKRMMLWR
Trigger: ACGCCAGAGCATCATCCGCTTCTGGCTGCAGAATTTGCGTGCCAAGCAGGGAGAAGCACTCCACAACGTGCGCTTCCTGGAGGACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 72 bp ACTTGCACGATGAGCTCGGGAATGCCCACGCGGATGTaGTTCAGCAGCCATAGCAGCGTGTGGTCATCGGTC +
Preference number: 6 (lower is better)
Translates to: TCTMSSGMPTRM*FSSHSSVWSSV
Trigger: GACCGATGACCACACGCTGCTATGGCTGCTGAACCACATCCGCGTGGGCATTCCCGAGCTCATCGTGCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000600711.1
ENST00000630631.1
CDS GCA 72 bp TCCTCCAGGAAGCGCACGTTGTGGAGTGCTTCTCCCTaGTTGGCACGCAAATTCTGCAGCCAGAAGCGGATG +
Preference number: 6 (lower is better)
Translates to: SSRKRTLWSASP*LARKFCSQKRM
Trigger: CATCCGCTTCTGGCTGCAGAATTTGCGTGCCAAGCAGGGAGAAGCACTCCACAACGTGCGCTTCCTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 72 bp GGGATGATTGGCTGGTCCTCCAGGAAGCGCACGTTGTaGAGTGCTTCTCCCTGCTTGGCACGCAAATTCTGC +
Preference number: 6 (lower is better)
Translates to: GMIGWSSRKRTL*SASPCLARKFC
Trigger: GCAGAATTTGCGTGCCAAGCAGGGAGAAGCACTCCACAACGTGCGCTTCCTGGAGGACCAGCCAATCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CAA 72 bp TCCGGGATGATTGGCTGGTCCTCCAGGAAGCGCACGTaGTGGAGTGCTTCTCCCTGCTTGGCACGCAAATTC +
Preference number: 6 (lower is better)
Translates to: SGMIGWSSRKRT*WSASPCLARKF
Trigger: GAATTTGCGTGCCAAGCAGGGAGAAGCACTCCACAACGTGCGCTTCCTGGAGGACCAGCCAATCATCCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS TCA 72 bp GCTGGTTTTCACACACGGCCTGCACCCATGACTTCATaGGGCGGTTCAGAATACGCTGCTCGTGGACAGGGA +
Preference number: 6 (lower is better)
Translates to: AGFHTRPAPMTS*GGSEYAARGQG
Trigger: TCCCTGTCCACGAGCAGCGTATTCTGAACCGCCTCATGAAGTCATGGGTGCAGGCCGTGTGTGAAAACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS GCA 72 bp TTGTGGAGTGCTTCTCCCTGCTTGGCACGCAAATTCTaGAGCCAGAAGCGGATGATGCTCTGGCGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: LWSASPCLARKF*SQKRMMLWRSW
Trigger: CCAGGAACGCCAGAGCATCATCCGCTTCTGGCTGCAGAATTTGCGTGCCAAGCAGGGAGAAGCACTCCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CAA 72 bp TCCAGGAAGCGCACGTTGTGGAGTGCTTCTCCCTGCTaGGCACGCAAATTCTGCAGCCAGAAGCGGATGATG +
Preference number: 6 (lower is better)
Translates to: SRKRTLWSASPC*ARKFCSQKRMM
Trigger: CATCATCCGCTTCTGGCTGCAGAATTTGCGTGCCAAGCAGGGAGAAGCACTCCACAACGTGCGCTTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS TCA 72 bp TCCATTCCTCTAGGAACAGCGTCGACCAGATCACGTTaGAGAGGGCAAAGACCACGCAGGAAACATCCCGGC +
Preference number: 6 (lower is better)
Translates to: SIPLGTASTRSR*RGQRPRRKHPG
Trigger: GCCGGGATGTTTCCTGCGTGGTCTTTGCCCTCTTCAACGTGATCTGGTCGACGCTGTTCCTAGAGGAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS GCA 72 bp TGCACCCATGACTTCATGAGGCGGTTCAGAATACGCTaGTCGTGGACAGGGAACACCTGCTGGATGATCCCA +
Preference number: 6 (lower is better)
Translates to: CTHDFMRRFRIR*SWTGNTCWMIP
Trigger: TGGGATCATCCAGCAGGTGTTCCCTGTCCACGAGCAGCGTATTCTGAACCGCCTCATGAAGTCATGGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CCA 72 bp CATGACTTCATGAGGCGGTTCAGAATACGCTGCTCGTaGACAGGGAACACCTGCTGGATGATCCCACGTGCT +
Preference number: 6 (lower is better)
Translates to: HDFMRRFRIRCS*TGNTCWMIPRA
Trigger: AGCACGTGGGATCATCCAGCAGGTGTTCCCTGTCCACGAGCAGCGTATTCTGAACCGCCTCATGAAGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS TCA 72 bp GCGTGGCCAGCATCTCTTTCAAGCGCTCCATGTCCTTaGGGTAGAAACCGATGTAGAAGAGGCTCAGGTACG +
Preference number: 6 (lower is better)
Translates to: AWPASLSSAPCP*GRNRCRRGSGT
Trigger: CGTACCTGAGCCTCTTCTACATCGGTTTCTACCTCAAGGACATGGAGCGCTTGAAAGAGATGCTGGCCACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000159087.7
CDS TCA 72 bp GGACGAGCAGGAGCTCTTTCAAGCGCTCCATGTCCTTaGGGTAGAAACCGATGTAGAAGAGGCTCAGGTACG +
Preference number: 6 (lower is better)
Translates to: GRAGALSSAPCP*GRNRCRRGSGT
Trigger: CGTACCTGAGCCTCTTCTACATCGGTTTCTACCTCAAGGACATGGAGCGCTTGAAAGAGCTCCTGCTCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597643.5
ENST00000630631.1
CDS CCA 72 bp CTCTGTGAATGTGTACAGGACAGACCCGAAGACAGCTaGGTATACCATAGCCGACGTGTAGAAGCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: LCECVQDRPEDS*VYHSRRVEAQP
Trigger: TGGCTGGGCTTCTACACGTCGGCTATGGTATACCCAGCTGTCTTCGGGTCTGTCCTGTACACATTCACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS CAA 72 bp TTCCATTCCTCTAGGAACAGCGTCGACCAGATCACGTaGAAGAGGGCAAAGACCACGCAGGAAACATCCCGG +
Preference number: 6 (lower is better)
Translates to: FHSSRNSVDQIT*KRAKTTQETSR
Trigger: CCGGGATGTTTCCTGCGTGGTCTTTGCCCTCTTCAACGTGATCTGGTCGACGCTGTTCCTAGAGGAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1
CDS GCA 72 bp CAGATGTCATCTAGAGGCTGGTTTTCACACACGGCCTaGACCCATGACTTCATGAGGCGGTTCAGAATACGC +
Preference number: 6 (lower is better)
Translates to: QMSSRGWFSHTA*THDFMRRFRIR
Trigger: GCGTATTCTGAACCGCCTCATGAAGTCATGGGTGCAGGCCGTGTGTGAAAACCAGCCTCTAGATGACATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000159087.7
ENST00000597643.5
ENST00000630631.1