RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANO6 (Homo sapiens)

Ensembl gene IDs: ENSG00000177119

Ensembl transcript IDs: ENST00000320560.13, ENST00000423947.7, ENST00000425752.6, ENST00000426898.2, ENST00000441606.2, ENST00000550630.5, ENST00000551667.1, ENST00000679426.1, ENST00000679761.1, ENST00000680201.1, ENST00000680371.1, ENST00000680498.1, ENST00000681156.1, ENST00000681817.1

Found 1469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGCTGGATGGGAGGTGAGTATGAGGAGTCAGAAAAGGCCTCCTaGAGGCAGGAACATCACCTGTGGTCCCAGATACGCAGGAGGTTG +
Preference number: 1 (lower is better)
Translates to: PGWMGGEYEESEKAS*RQEHHLWSQIRRRL
Trigger: CAACCTCCTGCGTATCTGGGACCACAGGTGATGTTCCTGCCTCCAGGAGGCCTTTTCTGACTCCTCATACTCACCTCCCATCCAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR TCA 90 bp CAGGTCCACTGCCACACCCATCAATTTCCCCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCT +
Preference number: 1 (lower is better)
Translates to: QVHCHTHQFPQGCCL*SHLQMQPPLSADTA
Trigger: AGCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTGGGGAAATTGATGGGTGTGGCAGTGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR TCA 90 bp AGCATGACCATGATGCAAATCACCTCCCTCTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTCTTT +
Preference number: 1 (lower is better)
Translates to: SMTMMQITSLLCTQQ*PVTSRGERAWLPVF
Trigger: AAAGACAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTTGCATCATGGTCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 90 bp AGGCACTCCCCACCCAATGACCACAATGAGGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCAT +
Preference number: 1 (lower is better)
Translates to: RHSPPNDHNEGTCCF*PCTQLYPNGCVVSH
Trigger: ATGGCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTGGTCATTGGGTGGGGAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 90 bp TCCTTGCATGATGGGCTGCCATGCTCCAATGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCAC +
Preference number: 1 (lower is better)
Translates to: SLHDGLPCSNVLGFL*YQASKLGGQFPCVH
Trigger: GTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 90 bp GGGCTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCG +
Preference number: 1 (lower is better)
Translates to: GLLPLKPLTDAATIV*RHSSMLFFITASQP
Trigger: CGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR GCA 90 bp GCATTGGTCACCACAGCCAGAATTGCTATTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGGGCTTTCTCTGGTACCAGGCGTCTA +
Preference number: 1 (lower is better)
Translates to: ALVTTARIAIPCMMG*HAPMSWAFSGTRRL
Trigger: TAGACGCCTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR TCA 90 bp GGGATTCTGATAGGTTGGCTCCTCTGGTGTTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACCATGATGCAAATCACCTCCCTCTTG +
Preference number: 1 (lower is better)
Translates to: GILIGWLLWCLTASQ*SPCSMTMMQITSLL
Trigger: CAAGAGGGAGGTGATTTGCATCATGGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAAACACCAGAGGAGCCAACCTATCAGAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 90 bp CGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATTaGTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCTTGGGC +
Preference number: 1 (lower is better)
Translates to: RRESYDHGIGHHSQN*YSLHDGLPCSNVLG
Trigger: GCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CCA 90 bp CATGCTCCAATGTCTTGGGCTTTCTCTGGTACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTGGAAAG +
Preference number: 1 (lower is better)
Translates to: HAPMSWAFSGTRRLN*VVSFHASTSCPFGK
Trigger: CTTTCCAAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGACATTGGAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 90 bp ATCCCAGTGCAGTCAGACTTCATGGGGCCTGTCTTGAACTCTGATTaGATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGG +
Preference number: 1 (lower is better)
Translates to: IPVQSDFMGPVLNSD*IINTIKRDSEMGSR
Trigger: CCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGACAGGCCCCATGAAGTCTGACTGCACTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 90 bp GCTATGATCATGGCATTGGTCACCACAGCCAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCTCCAATGTCTTGGGCTTTCTCTGGT +
Preference number: 1 (lower is better)
Translates to: AMIMALVTTARIAIP*MMGCHAPMSWAFSG
Trigger: ACCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATG +
Preference number: 1 (lower is better)
Translates to: SHHCLQTQLHAFLYH*KSAVDSLTNTVDGM
Trigger: CATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR GCA 90 bp AGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAA +
Preference number: 1 (lower is better)
Translates to: SHLQMQPPLSADTAP*FSLSLQVSRGLTNK
Trigger: TTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR GCA 90 bp GCACTCCCGTCTTGGCTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: ALPSWLHDNDKSQLG*NHMPIVDVVFILLG
Trigger: CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CCA 90 bp AGCAGTATCTCAGGAGTGAAGAGAGGAACAGTGGCACTCCCGTCTTaGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCAT +
Preference number: 1 (lower is better)
Translates to: SSISGVKRGTVALPS*LRMRKSFLQWEEIH
Trigger: ATGAATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATaGCATGGGGAAATGACCCTGCATCTCCACTACAACTTTGCTCTT +
Preference number: 1 (lower is better)
Translates to: LSLQVSRGLTNKHCG*HGEMTLHLHYNFAL
Trigger: AAGAGCAAAGTTGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR GCA 90 bp CTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACAACTTTaGTCTTTTGGGCATCTTAACAGTGTCAGATATTACATTTGGTGC +
Preference number: 1 (lower is better)
Translates to: LWMAWGNDPASPLQL*SFGHLNSVRYYIWC
Trigger: GCACCAAATGTAATATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR CCA 90 bp GGTCTGAGAGCAGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCTaGAGTCCATCTTATGTTCAACTTCCTAGGGCAACCTTCAGAATA +
Preference number: 1 (lower is better)
Translates to: GLRAGLHGKTGFLIP*SPSYVQLPRATFRI
Trigger: TATTCTGAAGGTTGCCCTAGGAAGTTGAACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR CCA 90 bp AAAGGAAAAGCGACTTGTCCACAGAGGTCTGAGAGCAGGGTTGCATaGAAAAACAGGGTTTCTAATTCCCTGGAGTCCATCTTATGTTCA +
Preference number: 1 (lower is better)
Translates to: KGKATCPQRSESRVA*KNRVSNSLESILCS
Trigger: TGAACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACCTCTGTGGACAAGTCGCTTTTCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR TCA 90 bp TTCATTTCTCCATCCCAGTGCAGTCAGACTTCATGGGGCCTGTCTTaGACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAA +
Preference number: 1 (lower is better)
Translates to: FISPSQCSQTSWGLS*TLIASLTRSRETVK
Trigger: TTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGACAGGCCCCATGAAGTCTGACTGCACTGGGATGGAGAAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 90 bp ACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATaGAGGATGCAAGGAAGCCACATTCTTTATGGCAGAGACTTTGGT +
Preference number: 1 (lower is better)
Translates to: TIRQLHQITGPRVTG*RMQGSHILYGRDFG
Trigger: ACCAAAGTCTCTGCCATAAAGAATGTGGCTTCCTTGCATCCTCCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 90 bp ATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTACAATACTGCTTTGATGGATCCTACA +
Preference number: 1 (lower is better)
Translates to: INTIKRDSEMGSRIH*DNSKAYNTALMDPT
Trigger: TGTAGGATCCATCAAAGCAGTATTGTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 90 bp CTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: LSNEKLHDNDKSQLG*NHMPIVDVVFILLG
Trigger: CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR GCA 90 bp AATGGGGTCCCGGATCCACTGGGACAATTCAAAAGCCTACAATACTaGTTTGATGGATCCTACATAATTACTTACAAATCATTCATGGCA +
Preference number: 1 (lower is better)
Translates to: NGVPDPLGQFKSLQY*FDGSYIITYKSFMA
Trigger: TGCCATGAATGATTTGTAAGTAATTATGTAGGATCCATCAAAGCAGTATTGTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 90 bp GTGCTCCTGGAAGATAAAAAGTGTCACTGTGGATTAGGACAAATATaGTTCAAAACCTTGCTATCTTCACTCCAACCTACTAAGAGTATT +
Preference number: 1 (lower is better)
Translates to: VLLEDKKCHCGLGQI*FKTLLSSLQPTKSI
Trigger: AATACTCTTAGTAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATATTTGTCCTAATCCACAGTGACACTTTTTATCTTCCAGGAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 90 bp GATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGCATTTaGAAGAAAGTTTTGAAGACATATGTGAACACATTCAAAATGTTA +
Preference number: 1 (lower is better)
Translates to: DAAWEEVTQPCMNSI*KKVLKTYVNTFKML
Trigger: TAACATTTTGAATGTGTTCACATATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTAC +
Preference number: 2 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLGTCCF*PCTQLY
Trigger: GTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIGARRA*QDRSAA
Trigger: TGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 2 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATACAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 2 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGLTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTATTCCCTTGAGATCTaGAAAGCAGTCAACATTGAT +
Preference number: 2 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLYSLEI*KAVNID
Trigger: ATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTTTATTACTCTTAACTaGCTGATTGGCTCTAGAGGA +
Preference number: 2 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLFITLN*LIGSRG
Trigger: TCCTCTAGAGCCAATCAGGCAGTTAAGAGTAATAAA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp TGTCCACAGAGGTCTGAGAGCAGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCAGGAACATCACCTGTaGTCCCAGATACGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: CPQRSESRVAWKNRVSNSQEHHL*SQIRRR
Trigger: CCTCCTGCGTATCTGGGACCACAGGTGATGTTCCTG...GGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACCTCTGTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR CAA 90 bp CAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAGGCGTCTAAACTGGGTGGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: QNCYSLHDGLPCSNV*GFLWYQASKLGGQF
Trigger: AAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CAA 90 bp AGCTATGATCATGGCATTGGTCACCACAGCCAGAATTGCTATTCCTaGCATGATGGGCTGCCATGCTCCAATGTCTTGGGCTTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: SYDHGIGHHSQNCYS*HDGLPCSNVLGFLW
Trigger: CCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 2 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGAGACTTTGGTGTGTTaGTCACTTTGGCATACAGAA +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSETLVC*SLWHTE
Trigger: TTCTGTATGCCAAAGTGATCAACACACCAAAGTCTC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATTACTCTTAACTGCCTaGTTGGCTCTAGAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRLLLTA*LALEEA
Trigger: AGCCTCCTCTAGAGCCAATCAGGCAGTTAAGAGTAA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 2 (lower is better)
Translates to: LIASLTRSRETVKWGPGSSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 2 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCGARRA*QDRSAA
Trigger: TGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCACTGTAAGGAAAAGATaGCCCTGGAACAGATCTAGC +
Preference number: 2 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSTVRKR*PWNRSS
Trigger: GCTAGATCTGTTCCAGGGTCATCTTTTCCTTACAGT...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTTACTCTTAACTGCCTaGTTGGCTCTAGAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLLLTA*LALEEA
Trigger: AGCCTCCTCTAGAGCCAATCAGGCAGTTAAGAGTAA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 2 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGG +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDRETVK*GPGSTG
Trigger: CCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp ATGTTTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGTGAGGATATCTACTCAGAAAAGGCCTCCTaGAGGCAGGAACATCACCTG +
Preference number: 2 (lower is better)
Translates to: MFLSHRAVTEQHSSEDIYSEKAS*RQEHHL
Trigger: CAGGTGATGTTCCTGCCTCCAGGAGGCCTTTTCTGA...GTAGATATCCTCACTGGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR-3UTR CCA 90 bp TTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGTGAGGATATCTACTGCTTTTCCAACACCAGGCTaGATGGGAGGTGAGTATGAG +
Preference number: 2 (lower is better)
Translates to: FSVTVQSLNNTPVRISTAFPTPG*MGGEYE
Trigger: CTCATACTCACCTCCCATCCAGCCTGGTGTTGGAAA...AGCAGTAGATATCCTCACTGGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 2 (lower is better)
Translates to: AATIVCRHSSMLFFITASVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CAA 90 bp AAGCAGTATCTCAGGAGTGAAGAGAGGAACAGTGGCACTCCCGTCTaGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCA +
Preference number: 2 (lower is better)
Translates to: KQYLRSEERNSGTPV*AANEKEFPSVGRNS
Trigger: TGAATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: LIASLTRSRETVKWGPGSQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCCACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 2 (lower is better)
Translates to: LIASLTRSRETVKWGPGSHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDLTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTCATGGGGCCTGTCTTaGACTCTGATTGCATCATTA +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYSWGLS*TLIASL
Trigger: TAATGATGCAATCAGAGTTCAAGACAGGCCCCATGA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 2 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 2 (lower is better)
Translates to: LIASLTRSRETVKWGPGSTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CAA 90 bp TTGATCACTTTGGCATACAGAAATAAGCCAATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCACCCAATGACCACAATGAGGGCACTT +
Preference number: 2 (lower is better)
Translates to: LITLAYRNKPIPADS*TKGTPHPMTTMRAL
Trigger: AAGTGCCCTCATTGTGGTCATTGGGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAATTGGCTTATTTCTGTATGCCAAAGTGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 2 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACA +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCHNEGT*CFCPCT
Trigger: TGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 2 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCGTCTTGGCTGCGAATaGGAAAGAGTTTCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDRLGCE*ERVSFS
Trigger: ACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTTTCCTTTTCTATGCTaGCATACATGGCGAGTAACT +
Preference number: 2 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGFPFLC*HTWRVT
Trigger: AGTTACTCGCCATGTATGTCAGCATAGAAAAGGAAA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATATTCCCTTGAGATCTaGAAAGCAGTCAACATTGAT +
Preference number: 2 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRYSLEI*KAVNID
Trigger: ATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTAC +
Preference number: 2 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGGTCCF*PCTQLY
Trigger: GTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATTTATTACTCTTAACTaGCTGATTGGCTCTAGAGGA +
Preference number: 2 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRFITLN*LIGSRG
Trigger: TCCTCTAGAGCCAATCAGGCAGTTAAGAGTAATAAA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCTTATGGCAGAGACTTTaGTGTGTTGATCACTTTGGC +
Preference number: 2 (lower is better)
Translates to: LIASLTRSRETVKWGPGSLWQRL*CVDHFG
Trigger: GCCAAAGTGATCAACACACCAAAGTCTCTGCCATAA...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 90 bp AGGATGCAAGGAAGCCACATTCTTTATGGCAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGAAATAAGCCAATTCCTGCAGACTCC +
Preference number: 2 (lower is better)
Translates to: RMQGSHILYGRDFGV*ITLAYRNKPIPADS
Trigger: GGAGTCTGCAGGAATTGGCTTATTTCTGTATGCCAAAGTGATCAACACACCAAAGTCTCTGCCATAAAGAATGTGGCTTCCTTGCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 90 bp ATTCATTTCTCCATCCCAGTGCAGTCAGACTTCATGGGGCCTGTCTaGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAA +
Preference number: 2 (lower is better)
Translates to: IHFSIPVQSDFMGPV*NSDCIINTIKRDSE
Trigger: TTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGACAGGCCCCATGAAGTCTGACTGCACTGGGATGGAGAAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 90 bp GTATGGTTACCCAGGTCAGAGTACGGGTTTCCCTTGCTTTTGTTTTaGAAGTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTAC +
Preference number: 2 (lower is better)
Translates to: VWLPRSEYGFPLLLF*KSATLKMERVLLMY
Trigger: GTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTCTGACCTGGGTAACCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 2 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGATAGGTTGGCTCCTCTaGTGTTTAACAGCATCCCAG +
Preference number: 2 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGIGWLL*CLTASQ
Trigger: CTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 90 bp TGGCATGGGGAAATGACCCTGCATCTCCACTACAACTTTGCTCTTTaGGGCATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAA +
Preference number: 2 (lower is better)
Translates to: WHGEMTLHLHYNFAL*GILTVSDITFGAFQ
Trigger: TTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGTCATTTCCCCATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp AGCAGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCTGGAGTCCATCTTATGTGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 2 (lower is better)
Translates to: SRVAWKNRVSNSLESILCVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...ACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTTTGTTTTTGAAGTCTaGGACTTTGAAGATGGAGAG +
Preference number: 2 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVFVFEV*DFEDGE
Trigger: CTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CAA 90 bp CACATTCAAAATGTTAACAGAGATTCTGCCGTATTCATAAGCTTGTaGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACA +
Preference number: 2 (lower is better)
Translates to: HIQNVNRDSAVFISL*ASRLKSFPMRSSMT
Trigger: TGTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATGAATACGGCAGAATCTCTGTTAACATTTTGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR CAA 90 bp GAACACATTCAAAATGTTAACAGAGATTCTGCCGTATTCATAAGCTaGTTGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATG +
Preference number: 2 (lower is better)
Translates to: EHIQNVNRDSAVFIS*LASRLKSFPMRSSM
Trigger: CATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATGAATACGGCAGAATCTCTGTTAACATTTTGAATGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR TCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGAAAGCCTCTAAAATCTaGGTTTTCCTTTGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGKASKI*VFLCCW
Trigger: CCAGCAGCAAAGGAAAACTCAGATTTTAGAGGCTTT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGGATTAGGACAAATATaGTTCAAAACCTTGCTATCT +
Preference number: 2 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIGLGQI*FKTLLS
Trigger: AGATAGCAAGGTTTTGAAGCATATTTGTCCTAATCC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAAAGCCTACAATACTaGTTTGATGGATCCTACATA +
Preference number: 2 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVKSLQY*FDGSYI
Trigger: TATGTAGGATCCATCAAAGCAGTATTGTAGGCTTTT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGATATTACATTTGGTaGCTTTCAATATGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVRYYIW*LSICRG
Trigger: CCCTCTACATATTGAAAGGCACCAAATGTAATATCT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACATGCGTCCACTAGTTaGCCTTTTGGAAAGCTCATC +
Preference number: 2 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFIHASTS*PFGKLI
Trigger: GATGAGCTTTCCAAAAGGGCAACTAGTGGACGCATG...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR GCA 90 bp TTGTTTTTGAAGTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 2 (lower is better)
Translates to: LFLKSATLKMERVLLMYPRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...AGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CAA 90 bp CGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGCATTaGGAAGAAAGTTTTGAAGACATATGTGAACACATTCAAAATGTT +
Preference number: 2 (lower is better)
Translates to: RCSMGRSHTAMHEQH*EESFEDICEHIQNV
Trigger: AACATTTTGAATGTGTTCACATATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR GCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGTATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTATTCCCTTGAGATCTaGAAAGCAGTCAACATTGAT +
Preference number: 2 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGYSLEI*KAVNID
Trigger: ATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATA...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 2 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 2 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 90 bp GAAGAAGTCACACAGCCATGCATGAACAGCATTTGGAAGAAAGTTTaGAAGACATATGTGAACACATTCAAAATGTTAACAGAGATTCTG +
Preference number: 2 (lower is better)
Translates to: EEVTQPCMNSIWKKV*KTYVNTFKMLTEIL
Trigger: CAGAATCTCTGTTAACATTTTGAATGTGTTCACATATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR GCA 72 bp TTCCCCAGGGCTGCTGCCTCTGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAGACACAGCTCCATGCT +
Preference number: 3 (lower is better)
Translates to: FPRAAASEATYR*SHHCLQTQLHA
Trigger: AGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR TCA 72 bp ATGATGCAAATCACCTCCCTCTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTC +
Preference number: 3 (lower is better)
Translates to: MMQITSLLCTQQ*PVTSRGERAWL
Trigger: GAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTTGCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 72 bp GCTAGGCTGAGCAAAAGTGAGGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAG +
Preference number: 3 (lower is better)
Translates to: ARLSKSEGARRA*QDRSAAGSNLQ
Trigger: CTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCCCTCACTTTTGCTCAGCCTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCAC +
Preference number: 3 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSIPADS*TKGTPH
Trigger: GTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAAT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 72 bp AGGCACTCCCCACCCAATGACCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACACAGTTGTACCCCAAT +
Preference number: 3 (lower is better)
Translates to: RHSPPNDHNEGT*CFCPCTQLYPN
Trigger: ATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTGGTCATTGGGTGGGGAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 72 bp CCACCCAATGACCACAATGAGGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTACCCCAATGGCTGTGTA +
Preference number: 3 (lower is better)
Translates to: PPNDHNEGTCCF*PCTQLYPNGCV
Trigger: TACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTGGTCATTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 72 bp ATGTCTTGGGCTTTCTCTGGTACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCT +
Preference number: 3 (lower is better)
Translates to: MSWAFSGTRRLN*VVSFHASTSCP
Trigger: AGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CAA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGTGGCACTCCCGTCTaGGCTGCGAATGAGAAAGAG +
Preference number: 3 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVSGTPV*AANEKE
Trigger: CTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 72 bp ACCACAGCCAGAATTGCTATTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGGGCTTTCTCTGGTACC +
Preference number: 3 (lower is better)
Translates to: TTARIAIPCMMG*HAPMSWAFSGT
Trigger: GGTACCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 72 bp ATGGCATTGGTCACCACAGCCAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCTCCAATGTCTTGGGCT +
Preference number: 3 (lower is better)
Translates to: MALVTTARIAIP*MMGCHAPMSWA
Trigger: AGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CCA 72 bp TTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGT +
Preference number: 3 (lower is better)
Translates to: LLFLPMHTVVPQ*LCSEPFTKAAG
Trigger: ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 72 bp CAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATaGCATGGGGAAATGACCCTGCATCTCCACTACAAC +
Preference number: 3 (lower is better)
Translates to: QVSRGLTNKHCG*HGEMTLHLHYN
Trigger: GTTGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR CCA 72 bp GCGACTTGTCCACAGAGGTCTGAGAGCAGGGTTGCATaGAAAAACAGGGTTTCTAATTCCCTGGAGTCCATC +
Preference number: 3 (lower is better)
Translates to: ATCPQRSESRVA*KNRVSNSLESI
Trigger: GATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACCTCTGTGGACAAGTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGCAAAGCAGTCAACATaGATTAGGCACGGAACCTCC +
Preference number: 3 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGAKQST*IRHGTS
Trigger: GGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTGC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCAC +
Preference number: 3 (lower is better)
Translates to: LIASLTRSRETVKWGPGSIPADS*TKGTPH
Trigger: GTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAAT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGA +
Preference number: 3 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSRDFGV*ITLAYR
Trigger: TCTGTATGCCAAAGTGATCAACACACCAAAGTCTCT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR TCA 72 bp ATAGGTTGGCTCCTCTGGTGTTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACCATGATGCAAATCACC +
Preference number: 3 (lower is better)
Translates to: IGWLLWCLTASQ*SPCSMTMMQIT
Trigger: GGTGATTTGCATCATGGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR TCA 72 bp CATTGGTCACCACAGCCAGAATTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAATGTCTTGGGCTTTCT +
Preference number: 3 (lower is better)
Translates to: HWSPQPELLFLA*WAAMLQCLGLS
Trigger: AGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CAA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGCAAAGCAGTCAACATaGATTAGGCACGGAACCTCC +
Preference number: 3 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVAKQST*IRHGTS
Trigger: GGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTGC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTGGGATTCTGATAGGTaGGCTCCTCTGGTGTTTAAC +
Preference number: 3 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYWDSDR*APLVFN
Trigger: GTTAAACACCAGAGGAGCCAACCTATCAGAATCCCA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTAGTGGCACTCCCGTCTaGGCTGCGAATGAGAAAGAG +
Preference number: 3 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCSGTPV*AANEKE
Trigger: CTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGCCACTAGTTGCCCTTTaGGAAAGCTCATCCTGCAAA +
Preference number: 3 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGPLVAL*ESSSCK
Trigger: TTTGCAGGATGAGCTTTCCAAAAGGGCAACTAGTGG...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATGGAGAGAGTGTTGTaGATGTACCCTTCCATGGTG +
Preference number: 3 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYMERVL*MYPSMV
Trigger: CACCATGGAAGGGTACATCAACAACACTCTCTCCAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 72 bp CCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTTTTCTTTATCACTGCA +
Preference number: 3 (lower is better)
Translates to: PLKPLTDAATIV*RHSSMLFFITA
Trigger: TGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR GCA 72 bp AGCTATGATCATGGCATTGGTCACCACAGCCAGAATTaGTATTCCTTGCATGATGGGCTGCCATGCTCCAAT +
Preference number: 3 (lower is better)
Translates to: SYDHGIGHHSQN*YSLHDGLPCSN
Trigger: ATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CAA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTGGGATTCTGATAGGTaGGCTCCTCTGGTGTTTAAC +
Preference number: 3 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIWDSDR*APLVFN
Trigger: GTTAAACACCAGAGGAGCCAACCTATCAGAATCCCA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAG +
Preference number: 3 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCPCSNV*GFLWYQ
Trigger: CTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CAA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCAGAATTGCTATTCCTaGCATGATGGGCTGCCATGC +
Preference number: 3 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTQNCYS*HDGLPC
Trigger: GCATGGCAGCCCATCATGCAAGGAATAGCAATTCTG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 72 bp TGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCACTAACAAACACTGTG +
Preference number: 3 (lower is better)
Translates to: CLQTQLHAFLYH*KSAVDSLTNTV
Trigger: CACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR CCA 72 bp GCAGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCTaGAGTCCATCTTATGTTCAACTTCCTAGGGCAACC +
Preference number: 3 (lower is better)
Translates to: AGLHGKTGFLIP*SPSYVQLPRAT
Trigger: GGTTGCCCTAGGAAGTTGAACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATCTGAGTCTCTTTACTaGATTATGAATAAGCTGGGT +
Preference number: 3 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRSESLY*IMNKLG
Trigger: ACCCAGCTTATTCATAATCAAGTAAAGAGACTCAGA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp AGCAGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCTGGAGTCCATCTTATGTCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 3 (lower is better)
Translates to: SRVAWKNRVSNSLESILCPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...ACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR CCA 72 bp ATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTACAATACTGCTTTGATG +
Preference number: 3 (lower is better)
Translates to: IKRDSEMGSRIH*DNSKAYNTALM
Trigger: CATCAAAGCAGTATTGTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 72 bp ATTGCATCATTAACACGATCAAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGGACAATTCAAAAGCCT +
Preference number: 3 (lower is better)
Translates to: IASLTRSRETVK*GPGSTGTIQKP
Trigger: AGGCTTTTGAATTGTCCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCATATGCTTCAAAACCTaGCTATCTTCACTCCAACCT +
Preference number: 3 (lower is better)
Translates to: LIASLTRSRETVKWGPGSICFKT*LSSLQP
Trigger: AGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATAT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTTCATGGGGCCTGTCTaGAACTCTGATTGCATCATT +
Preference number: 3 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCFMGPV*NSDCII
Trigger: AATGATGCAATCAGAGTTCAAGACAGGCCCCATGAA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCAC +
Preference number: 3 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSIPADS*TKGTPH
Trigger: GTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAAT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTCTGAGTCTCTTTACTaGATTATGAATAAGCTGGGT +
Preference number: 3 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVSESLY*IMNKLG
Trigger: ACCCAGCTTATTCATAATCAAGTAAAGAGACTCAGA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp TTGTTTTTGAAGTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTGCTATGATCATGGCATaGGTCACCACAGCCAGAATT +
Preference number: 3 (lower is better)
Translates to: LFLKSATLKMERVLLMYPAMIMA*VTTARI
Trigger: AATTCTGGCTGTGGTGACCAATGCCATGATCATAGC...AGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CCA 72 bp AACATTCTAAATGCTATCTGGAACATCGATGCAGCATaGGAAGAAGTCACACAGCCATGCATGAACAGCATT +
Preference number: 3 (lower is better)
Translates to: NILNAIWNIDAA*EEVTQPCMNSI
Trigger: AATGCTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATAGCATTTAGAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR CAA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGA +
Preference number: 3 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGRDFGV*ITLAYR
Trigger: TCTGTATGCCAAAGTGATCAACACACCAAAGTCTCT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGATATGCTTCAAAACCTaGCTATCTTCACTCCAACCT +
Preference number: 3 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWICFKT*LSSLQP
Trigger: AGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATAT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp TACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTGACTGAATCTGGCCAAGTATTCATAAGCTTGTaGGCATCGAGGCTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: YYLYQMFAQAVEVTESGQVFISL*ASRLKS
Trigger: GCTCTTCAGCCTCGATGCCAACAAGCTTATGAATAC...TTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR CAA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCTGAGTCTCTTTACTaGATTATGAATAAGCTGGGT +
Preference number: 3 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGSESLY*IMNKLG
Trigger: ACCCAGCTTATTCATAATCAAGTAAAGAGACTCAGA...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 72 bp TCTTGGCTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATA +
Preference number: 3 (lower is better)
Translates to: SWLHDNDKSQLG*NHMPIVDVVFI
Trigger: TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 72 bp GAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATA +
Preference number: 3 (lower is better)
Translates to: EKLHDNDKSQLG*NHMPIVDVVFI
Trigger: TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR CAA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGA +
Preference number: 3 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSRDFGV*ITLAYR
Trigger: TCTGTATGCCAAAGTGATCAACACACCAAAGTCTCT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR TCA 72 bp ACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTaGCTGAATCTGGCCAAATATTCTGAGCGTTTCGGA +
Preference number: 3 (lower is better)
Translates to: TIYIKCLHRLLK*LNLAKYSERFG
Trigger: TCCGAAACGCTCAGAATATTTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR GCA 72 bp CCGGATCCACTGGGACAATTCAAAAGCCTACAATACTaGTTTGATGGATCCTACATAATTACTTACAAATCA +
Preference number: 3 (lower is better)
Translates to: PDPLGQFKSLQY*FDGSYIITYKS
Trigger: TGATTTGTAAGTAATTATGTAGGATCCATCAAAGCAGTATTGTAGGCTTTTGAATTGTCCCAGTGGATCCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 72 bp GAAGATAAAAAGTGTCACTGTGGATTAGGACAAATATaGTTCAAAACCTTGCTATCTTCACTCCAACCTACT +
Preference number: 3 (lower is better)
Translates to: EDKKCHCGLGQI*FKTLLSSLQPT
Trigger: AGTAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATATTTGTCCTAATCCACAGTGACACTTTTTATCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTATATGCTTCAAAACCTaGCTATCTTCACTCCAACCT +
Preference number: 3 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFICFKT*LSSLQP
Trigger: AGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATAT...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAAGGACGCCTCTCGCCTaGCGAGCGGAGCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRRTPLA*RAEPGD
Trigger: GTCTCCGGGCTCCGCTCGGCAGGCGAGAGGCGTCCT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320560.13
ENST00000423947.7
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGAGGACGCCTCTCGCCTaGCGAGCGGAGCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGRTPLA*RAEPGD
Trigger: GTCTCCGGGCTCCGCTCGGCAGGCGAGAGGCGTCCT...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLLTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGGGGCGTGTGTCGCTTaGGCTCAGGGGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASGACVA*AQGPLS
Trigger: GCTCAGCGGCCCCTGAGCCCAAGCGACACACGCCCC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLEATYR*SHHCLQ
Trigger: CTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCAACACCAGGCTGGATGGGAGGTGAGTATGAGGAGTCAGAAAAGGCCTCCTGGGCGCTACTCCACTACTaGACTTCAGCCCGATATCCC +
Preference number: 4 (lower is better)
Translates to: PTPGWMGGEYEESEKASWALLHY*TSARYP
Trigger: GGGATATCGGGCTGAAGTGCAGTAGTGGAGTAGCGC...CCAGGAGGCCTTTTCTGACTCCTCATACTCACCTCCCATCCAGCCTGGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGGGGCGTGTGTCGCTTaGGCTCAGGGGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYGACVA*AQGPLS
Trigger: GCTCAGCGGCCCCTGAGCCCAAGCGACACACGCCCC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACCAGGCTGGATGGGAGGTGAGTATGAGGAGTCAGAAAAGGCCTCCTGGAGGCTTTCCAACACCAGGCTaGATGGGAGGTGAGTATGAG +
Preference number: 4 (lower is better)
Translates to: HQAGWEVSMRSQKRPPGGFPTPG*MGGEYE
Trigger: CTCATACTCACCTCCCATCCAGCCTGGTGTTGGAAA...GCCTCCAGGAGGCCTTTTCTGACTCCTCATACTCACCTCCCATCCAGCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSLCTQQ*PVTSRG
Trigger: ACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCTGGAGTCCATCTTATGTTCAGGGGCGTGTGTCGCTTaGGCTCAGGGGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RVAWKNRVSNSLESILCSGACVA*AQGPLS
Trigger: GCTCAGCGGCCCCTGAGCCCAAGCGACACACGCCCC...TGAACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKGARRA*QDRSAA
Trigger: TGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSGSRIH*DNSKAY
Trigger: GTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATTCCTGCAGACTCCTTaGCAAAAGGCACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRFLQTP*QKALPT
Trigger: GGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTCCTGCAGACTCCTTaGCAAAAGGCACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHFLQTP*QKALPT
Trigger: GGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQISAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILCTQQ*PVTSRG
Trigger: ACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGGACGCCTCTCGCCTaGCGAGCGGAGCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGRTPLA*RAEPGD
Trigger: GTCTCCGGGCTCCGCTCGGCAGGCGAGAGGCGTCCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320560.13
ENST00000423947.7
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACCACAGCCAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: HHSQNCYSLHDGLPCSNVSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...GACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GTACCCTTCCATGGTGTAGGAAGTGTGGTCCCCGTAGGGAGGGACGGAGAAGGAGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: VPFHGVGSVVPVGRDGEGAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...TCCTTCTCCGTCCCTCCCTACGGGGACCACACTTCCTACACCATGGAAGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSEATYR*SHHCLQ
Trigger: CTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGGGGCGTGTGTCGCTTaGGCTCAGGGGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGGACVA*AQGPLS
Trigger: GCTCAGCGGCCCCTGAGCCCAAGCGACACACGCCCC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680201.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp TTTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGTGAGGATATCTACTGCAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLSHRAVTEQHSSEDIYCNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...GCAGTAGATATCCTCACTGGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQITRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATACTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGG +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSRETVK*GPGSTG
Trigger: CCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCT...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHRETVK*GPGSTG
Trigger: CCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCGACTTGTCCACAGAGGTCTGAGAGCAGGGTTGCATGGAAAAACAGGGTTTCTCAGGAACATCACCTGTaGTCCCAGATACGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ATCPQRSESRVAWKNRVSQEHHL*SQIRRR
Trigger: CCTCCTGCGTATCTGGGACCACAGGTGATGTTCCTG...AGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACCTCTGTGGACAAGTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR CAA 72 bp CATGGCATTGGTCACCACAGCCAGAATTGCTATTCCTaGCATGATGGGCTGCCATGCTCCAATGTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: HGIGHHSQNCYS*HDGLPCSNVLG
Trigger: GCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSLCTQQ*PVTSRG
Trigger: ACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLCTQQ*PVTSRG
Trigger: ACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIGTCCF*PCTQLY
Trigger: GTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCATGCGTCCACTAGTTaGCCTTTTGGAAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSHASTS*PFGKLI
Trigger: GATGAGCTTTCCAAAAGGGCAACTAGTGGACGCATG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACCACAGCCAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: HHSQNCYSLHDGLPCSNVLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...GACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASGARRA*QDRSAA
Trigger: TGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGG +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHRETVK*GPGSTG
Trigger: CCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGTGGCACTCCCGTCTTaGCTGCGAATGAGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKVALPS*LRMRKS
Trigger: ACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCAC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGTGGCACTCCCGTCTTaGCTGCGAATGAGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMVALPS*LRMRKS
Trigger: ACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCAC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTCAACACCAGGCTGGATaGGAGGTGAGTATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGQHQAG*EVSMRS
Trigger: ACTCCTCATACTCACCTCCCATCCAGCCTGGTGTTG...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423947.7
CDS-3UTR CCA 90 bp TCCCAAATCGGGGACAATTGTCTGTCCAAGGTTTTCCAACACCAGGCTGGATGGCAACACCAGGCTGGATaGGAGGTGAGTATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SQIGDNCLSKVFQHQAGWQHQAG*EVSMRS
Trigger: ACTCCTCATACTCACCTCCCATCCAGCCTGGTGTTG...CCATCCAGCCTGGTGTTGGAAAACCTTGGACAGACAATTGTCCCCGATTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCACTGTAAGGAAAAGATaGCCCTGGAACAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSTVRKR*PWNRSS
Trigger: GCTAGATCTGTTCCAGGGTCATCTTTTCCTTACAGT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATACACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACAGTAGACTGCTAGGCTaGGCAAAAGTGAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHSRLLG*AKVRGQ
Trigger: TTGCCCCCTCACTTTTGCTCAGCCTAGCAGTCTACT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATAATTCGGTGAGTCCTTaGCGCTTCTTACCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHNSVSP*RFLPSY
Trigger: GTAGGAGGGTAAGAAGCGTCAAGGACTCACCGAATT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGGACGCCTCTCGCCTaGCGAGCGGAGCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRTPLA*RAEPGD
Trigger: GTCTCCGGGCTCCGCTCGGCAGGCGAGAGGCGTCCT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRGTCCF*PCTQLY
Trigger: GTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMHNEGT*CFCPCT
Trigger: TGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTATTTCTCCATCCCAGTaGAGTCAGACTTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGISPSQ*SQTSWG
Trigger: GCCCCATGAAGTCTGACTGCACTGGGATGGAGAAAT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAATTTCTCCATCCCAGTaGAGTCAGACTTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRISPSQ*SQTSWG
Trigger: GCCCCATGAAGTCTGACTGCACTGGGATGGAGAAAT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATCTTCACAGGTCCACTaGCACACCCATCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKSSQVH*HTHQFP
Trigger: GGGAAATTGATGGGTGTGGCAGTGGACCTGTGAAGA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGGGGCGTGTGTCGCTTaGGCTCAGGGGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWGACVA*AQGPLS
Trigger: GCTCAGCGGCCCCTGAGCCCAAGCGACACACGCCCC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp TTTAAGATAGCTAAAATGTTTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FKIAKMFLSHRAVTEQHSRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...GGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAAACATTTTAGCTATCTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680201.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQISQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAACACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQITVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAATAGGTTGGCTCCTCTaGTGTTTAACAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIIGWLL*CLTASQ
Trigger: CTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGGGATTCTGATAGGTTaGCTCCTCTGGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSGILIG*LLWCLT
Trigger: TGTTAAACACCAGAGGAGCCAACCTATCAGAATCCC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHGSRIH*DNSKAY
Trigger: GTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGTCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGAGTAGACTGCTAGGCTaGGCAAAAGTGAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVSRLLG*AKVRGQ
Trigger: TTGCCCCCTCACTTTTGCTCAGCCTAGCAGTCTACT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSLCTQQ*PVTSRG
Trigger: ACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAA...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVLTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAACGTCTTGGCTGCGAATaGGAAAGAGTTTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKRLGCE*ERVSFS
Trigger: ACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACG...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACGTCTTGGCTGCGAATaGGAAAGAGTTTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRRLGCE*ERVSFS
Trigger: ACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAAGGGAAGACTTTGGTaGCAGTTTATAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSKGRLW*QFIRWP
Trigger: AGGCCATCTTATAAACTGTCACCAAAGTCTTCCCTT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACATGCAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PMRSSMTMIKASLAAITCSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...GCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAACGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYHNEGT*CFCPCT
Trigger: TGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATTTCTCCATCCCAGTaGAGTCAGACTTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYISPSQ*SQTSWG
Trigger: GCCCCATGAAGTCTGACTGCACTGGGATGGAGAAAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGEATYR*SHHCLQ
Trigger: CTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEILGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDGARRA*QDRSAA
Trigger: TGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTATAGGTTGGCTCCTCTaGTGTTTAACAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGIGWLL*CLTASQ
Trigger: CTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAATAGGTTGGCTCCTCTaGTGTTTAACAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRIGWLL*CLTASQ
Trigger: CTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGTGGCACTCCCGTCTTaGCTGCGAATGAGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVVALPS*LRMRKS
Trigger: ACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCAC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCGTGGCACTCCCGTCTTaGCTGCGAATGAGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSVALPS*LRMRKS
Trigger: ACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCAC...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CCA 90 bp TTTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGTGAGGATATCTACTGCTCAGAAAAGGCCTCCTaGAGGCAGGAACATCACCTG +
Preference number: 4 (lower is better)
Translates to: FLSHRAVTEQHSSEDIYCSEKAS*RQEHHL
Trigger: CAGGTGATGTTCCTGCCTCCAGGAGGCCTTTTCTGA...GCAGTAGATATCCTCACTGGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR CAA 72 bp CATGCTGACTTTCCAGTGATCCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCAACACCAGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: HADFPVIPNRGQ*SVQGFPTPGWM
Trigger: CATCCAGCCTGGTGTTGGAAAACCTTGGACAGACAATTGTCCCCGATTTGGGATCACTGGAAAGTCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQITLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp GTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTACCCAGTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: VSRWVSEITIPACGMVTQYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...CTGGGTAACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSLQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATACTGTAAGGAAAAGATaGCCCTGGAACAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHTVRKR*PWNRSS
Trigger: GCTAGATCTGTTCCAGGGTCATCTTTTCCTTACAGT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACTGTAAGGAAAAGATaGCCCTGGAACAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMTVRKR*PWNRSS
Trigger: GCTAGATCTGTTCCAGGGTCATCTTTTCCTTACAGT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTACTGTAAGGAAAAGATaGCCCTGGAACAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGTVRKR*PWNRSS
Trigger: GCTAGATCTGTTCCAGGGTCATCTTTTCCTTACAGT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACCACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTTCCTGCAGACTCCTTaGCAAAAGGCACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYFLQTP*QKALPT
Trigger: GGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTTCCTGCAGACTCCTTaGCAAAAGGCACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDFLQTP*QKALPT
Trigger: GGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTCATGGGGCCTGTCTTaGACTCTGATTGCATCATTA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGSWGLS*TLIASL
Trigger: TAATGATGCAATCAGAGTTCAAGACAGGCCCCATGA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACCGTCTTGGCTGCGAATaGGAAAGAGTTTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHRLGCE*ERVSFS
Trigger: ACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACG...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTTCCATGGTGTAGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VCDFEDGESVVDVPFHGVVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...TACACCATGGAAGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAAAGGGAAGACTTTGGTaGCAGTTTATAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIKGRLW*QFIRWP
Trigger: AGGCCATCTTATAAACTGTCACCAAAGTCTTCCCTT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTAGACTTCATGGCAGGTaGTGGGCTCGAACCAAGCAG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCRLHGR*WARTKQ
Trigger: CTGCTTGGTTCGAGCCCATCACCTGCCATGAAGTCT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACAGCCAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCTTGGACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: TARIAIPCMMGCHAPMSWTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGGATCTTGCTCTTTGTaGGTTTTGATACATCGGGAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIGSCSL*VLIHRE
Trigger: TTCCCGATGTATCAAAACGCACAAAGAGCAAGATCC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIHNEGT*CFCPCT
Trigger: TGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTG...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTATTTCTCCATCCCAGTaGAGTCAGACTTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIISPSQ*SQTSWG
Trigger: GCCCCATGAAGTCTGACTGCACTGGGATGGAGAAAT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASEATYR*SHHCLQ
Trigger: CTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTCTTCACAGGTCCACTaGCACACCCATCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASSSQVH*HTHQFP
Trigger: GGGAAATTGATGGGTGTGGCAGTGGACCTGTGAAGA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTCTTCACAGGTCCACTaGCACACCCATCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVSSQVH*HTHQFP
Trigger: GGGAAATTGATGGGTGTGGCAGTGGACCTGTGAAGA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680201.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIGVRYF*IGSVPL
Trigger: TAATGGAACAGACCCAATCCAGAAATACCTGACTCC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGCACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATTATGGCAGAGACTTTaGTGTGTTGATCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILWQRL*CVDHFG
Trigger: GCCAAAGTGATCAACACACCAAAGTCTCTGCCATAA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCRETVK*GPGSTG
Trigger: CCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCCAAATCGGGGACAATTGTCTGTCCAAGGTTTTCCAACACCAGGCTGGATGGGGAGAGCAGGGTTGCATaGAAAAACAGGGTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: PKSGTIVCPRFSNTRLDGESRVA*KNRVSN
Trigger: ATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTC...CCCATCCAGCCTGGTGTTGGAAAACCTTGGACAGACAATTGTCCCCGATTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGTGGCACTCCCGTCTTaGCTCCATGACAATGATAAA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGVALPS*LHDNDK
Trigger: TTTATCATTGTCATGGAGCCAAGACGGGAGTGCCAC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGTGGCACTCCCGTCTTaGCTCCATGACAATGATAAA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYVALPS*LHDNDK
Trigger: TTTATCATTGTCATGGAGCCAAGACGGGAGTGCCAC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
3UTR CAA 72 bp GAAAAGCGACTTGTCCACAGAGGTCTGAGAGCAGGGTaGCATGGAAAAACAGGGTTTCTAATTCCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EKRLVHRGLRAG*HGKTGFLIPWS
Trigger: ACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACCTCTGTGGACAAGTCGCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTATGCTGACTTTCCAGTaGTCCCAAATCGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIMLTFQ*SQIGDN
Trigger: ATTGTCCCCGATTTGGGATCACTGGAAAGTCAGCAT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
CDS-3UTR TCA 90 bp CACCACAGCCAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: HHSQNCYSLHDGLPCSNVVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...GACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATTCTGGTGGCTGGATTaGAGAAAGCATCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKFWWLD*RKHLYQ
Trigger: TTGATAGAGATGCTTTCTTCAATCCAGCCACCAGAA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: IEAEELSNEKLHDNDKSQLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...CTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQISFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAAAAGCCTCTAAAATCTaGGTTTTCCTTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRKASKI*VFLCCW
Trigger: CCAGCAGCAAAGGAAAACTCAGATTTTAGAGGCTTT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATTTCAGCTCTGCTTATaGACTCTTCCCCTATTCCTA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKFQLCL*TLPLFL
Trigger: TAGGAATAGGGGAAGAGTTCATAAGCAGAGCTGAAA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATAAGCTTGTTGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HKLVGIEAEELSNEKLHDMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...GTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGGATCTTGCTCTTTGTaGGTTTTGATACATCGGGAA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKGSCSL*VLIHRE
Trigger: TTCCCGATGTATCAAAACGCACAAAGAGCAAGATCC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTTCTCTCTGGATCTTaGTCTTTGTGCGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSFLSGS*SLCVLI
Trigger: TATCAAAACGCACAAAGAGCAAGATCCAGAGAGAAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTTATTACTCTTAACTaGCTGATTGGCTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSFITLN*LIGSRG
Trigger: TCCTCTAGAGCCAATCAGGCAGTTAAGAGTAATAAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHADTAP*FSLSLQ
Trigger: TTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGC...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCTACTTCAGTTAAGCTaGTCATACATTTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSLLQLS*SYIFTL
Trigger: GAGGGTAAAAATGTATGAGCAGCTTAACTGAAGTAG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGCCGCCGCGGCTCGCTaGGGAATGATTGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWAAAAR*GMIELP
Trigger: GGGAAGTTCAATCATTCCGCAGCGAGCCGCGGCGGC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTATAGGTTGGCTCCTCTaGTGTTTAACAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIIGWLL*CLTASQ
Trigger: CTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTGSRIH*DNSKAY
Trigger: GTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATTTCCAACACCAGGCTaGATGGGAGGTGAGTATGAG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSFPTPG*MGGEYE
Trigger: CTCATACTCACCTCCCATCCAGCCTGGTGTTGGAAA...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423947.7
CDS-3UTR CCA 90 bp CGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATTGCTATTCCGTGGCACTCCCGTCTTaGCTCCATGACAATGATAAA +
Preference number: 4 (lower is better)
Translates to: RRESYDHGIGHHSQNCYSVALPS*LHDNDK
Trigger: TTTATCATTGTCATGGAGCCAAGACGGGAGTGCCAC...GGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAATGCTGACTTTCCAGTaGTCCCAAATCGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSMLTFQ*SQIGDN
Trigger: ATTGTCCCCGATTTGGGATCACTGGAAAGTCAGCAT...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000681156.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTTCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTACCCAGGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: VSRWVSEITIPACGMVTQAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...CTGGGTAACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGCTCTTTGTGCGTTTTaGTACATCGGGAATTGCATA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGALCAF*YIGNCI
Trigger: TATGCAATTCCCGATGTATCAAAACGCACAAAGAGC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGCTCTTTGTGCGTTTTaGTACATCGGGAATTGCATA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYALCAF*YIGNCI
Trigger: TATGCAATTCCCGATGTATCAAAACGCACAAAGAGC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATTACTCTTAACTGCCTaGTTGGCTCTAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSLLLTA*LALEEA
Trigger: AGCCTCCTCTAGAGCCAATCAGGCAGTTAAGAGTAA...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTCATGGGGCCTGTCTTaGACTCTGATTGCATCATTA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEISWGLS*TLIASL
Trigger: TAATGATGCAATCAGAGTTCAAGACAGGCCCCATGA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTTCCTTTTCTATGCTaGCATACATGGCGAGTAACT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHFPFLC*HTWRVT
Trigger: AGTTACTCGCCATGTATGTCAGCATAGAAAAGGAAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTTTCCTTTTCTATGCTaGCATACATGGCGAGTAACT +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSFPFLC*HTWRVT
Trigger: AGTTACTCGCCATGTATGTCAGCATAGAAAAGGAAA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATAATTCGGTGAGTCCTTaGCGCTTCTTACCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDNSVSP*RFLPSY
Trigger: GTAGGAGGGTAAGAAGCGTCAAGGACTCACCGAATT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR TCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATATGCCTAGGCTGGTCTTaGACTCCTGGGCTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFICLGWS*TPGLKG
Trigger: TCCCTTGAGCCCAGGAGTTCAAGACCAGCCTAGGCA...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGAAGGGAAGAAGGCCTaGGTCTCATTTCAAGATATT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHEGKKA*VSFQDI
Trigger: AATATCTTGAAATGAGACTCAGGCCTTCTTCCCTTC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGGATTAGGACAAATATaGTTCAAAACCTTGCTATCT +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSGLGQI*FKTLLS
Trigger: AGATAGCAAGGTTTTGAAGCATATTTGTCCTAATCC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDHNEGT*CFCPCT
Trigger: TGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGTCTTGAACTCTGATTaGATCATTAACACGATCAAG +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIVLNSD*IINTIK
Trigger: CTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAGATATTACATTTGGTaGCTTTCAATATGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSRYYIW*LSICRG
Trigger: CCCTCTACATATTGAAAGGCACCAAATGTAATATCT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYADTAP*FSLSLQ
Trigger: TTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGTATCTGGAACATCGATaGAGCATGGGAAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQYLEHR*SMGRSH
Trigger: GTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LSNEKLHDNDKSQLGCNHYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...GTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYGVRYF*IGSVPL
Trigger: TAATGGAACAGACCCAATCCAGAAATACCTGACTCC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACATGCTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: PMRSSMTMIKASLAAITCSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...GCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp GTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTTCCATGGTGTATCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: VCDFEDGESVVDVPFHGVSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...TACACCATGGAAGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATCACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGGGATTCTGATAGGTTaGCTCCTCTGGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIGILIG*LLWCLT
Trigger: TGTTAAACACCAGAGGAGCCAACCTATCAGAATCCC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGGSRIH*DNSKAY
Trigger: GTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 72 bp TTGGCATACAGAAATAAGCCAATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCACCCAATGACCACAATG +
Preference number: 4 (lower is better)
Translates to: LAYRNKPIPADS*TKGTPHPMTTM
Trigger: CATTGTGGTCATTGGGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAATTGGCTTATTTCTGTATGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 72 bp TCCATCCCAGTGCAGTCAGACTTCATGGGGCCTGTCTaGAACTCTGATTGCATCATTAACACGATCAAGAGA +
Preference number: 4 (lower is better)
Translates to: SIPVQSDFMGPV*NSDCIINTIKR
Trigger: TCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGACAGGCCCCATGAAGTCTGACTGCACTGGGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000681156.1
CDS-3UTR TCA 90 bp TTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGTGAGGATATCTACTGCTGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: FSVTVQSLNNTPVRISTAVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...AGCAGTAGATATCCTCACTGGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000681156.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGTCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SQLGCNHMPIVDVVFILLSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...CAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTTCTGGTGGCTGGATTaGAGAAAGCATCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVFWWLD*RKHLYQ
Trigger: TTGATAGAGATGCTTTCTTCAATCCAGCCACCAGAA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATTGCTATTCCACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RRESYDHGIGHHSQNCYSTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...GGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp CATAAGCTTGTTGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HKLVGIEAEELSNEKLHDPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...GTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp GATCATGTCCGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: DHVRRESYDHGIGHHSQNPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...ATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCGGACATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEITEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATAAGCTTGTTGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: HKLVGIEAEELSNEKLHDTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...GTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHLQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GATCATGTCCGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: DHVRRESYDHGIGHHSQNRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...ATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCGGACATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTGCTATGTAGAAGCATaGAGAGTAGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGCYVEA*RVVVDK
Trigger: TTTGTCAACTACTACTCTTCATGCTTCTACATAGCA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCTATGTAGAAGCATaGAGAGTAGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKCYVEA*RVVVDK
Trigger: TTTGTCAACTACTACTCTTCATGCTTCTACATAGCA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVDPETL*NRPIRF
Trigger: GAATCTAATTGGGCGATTTCACAGAGTTTCTGGATC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACAGCCAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCTTGGTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: TARIAIPCMMGCHAPMSWWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGAGACTTTGGTGTGTTaGTCACTTTGGCATACAGAA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVETLVC*SLWHTE
Trigger: TTCTGTATGCCAAAGTGATCAACACACCAAAGTCTC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGAGACTTTGGTGTGTTaGTCACTTTGGCATACAGAA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIETLVC*SLWHTE
Trigger: TTCTGTATGCCAAAGTGATCAACACACCAAAGTCTC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTTTACTCTTAACTGCCTaGTTGGCTCTAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTLLLTA*LALEEA
Trigger: AGCCTCCTCTAGAGCCAATCAGGCAGTTAAGAGTAA...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAAAGCCTCTAAAATCTaGGTTTTCCTTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASKASKI*VFLCCW
Trigger: CCAGCAGCAAAGGAAAACTCAGATTTTAGAGGCTTT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCAAAGCCTCTAAAATCTaGGTTTTCCTTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSKASKI*VFLCCW
Trigger: CCAGCAGCAAAGGAAAACTCAGATTTTAGAGGCTTT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTCCTACAATACTGCTTTaGTGGATCCTACATAATTAC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGPTILL*WILHNY
Trigger: GTAATTATGTAGGATCCATCAAAGCAGTATTGTAGG...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACCTACAATACTGCTTTaGTGGATCCTACATAATTAC +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRPTILL*WILHNY
Trigger: GTAATTATGTAGGATCCATCAAAGCAGTATTGTAGG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCGTCTTGGCTGCGAATaGGAAAGAGTTTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTRLGCE*ERVSFS
Trigger: ACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTTCCTTTTCTATGCTaGCATACATGGCGAGTAACT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHFPFLC*HTWRVT
Trigger: AGTTACTCGCCATGTATGTCAGCATAGAAAAGGAAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TTGTTTTTGAAGTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: LFLKSATLKMERVLLMYPDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...AGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAGGGAAGACTTTGGTaGCAGTTTATAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVKGRLW*QFIRWP
Trigger: AGGCCATCTTATAAACTGTCACCAAAGTCTTCCCTT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAAGGGAAGACTTTGGTaGCAGTTTATAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASKGRLW*QFIRWP
Trigger: AGGCCATCTTATAAACTGTCACCAAAGTCTTCCCTT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGGCGGAGGTTGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRRRLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCAACCTCCGCCT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGAATGGACAATTCGGTaGGTCCTTGACGCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTEWTIR*VLDASY
Trigger: GTAAGAAGCGTCAAGGACTCACCGAATTGTCCATTC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR TCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGTCACACAGCCATGCATaGACAGCATTTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGSHSHA*TAFGRK
Trigger: CTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGA...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFRGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHRGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTACCCAGATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: VSRWVSEITIPACGMVTQIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...CTGGGTAACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR GCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: LSNEKLHDNDKSQLGCNHRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...GTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGGATCTTGCTCTTTGTaGGTTTTGATACATCGGGAA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASGSCSL*VLIHRE
Trigger: TTCCCGATGTATCAAAACGCACAAAGAGCAAGATCC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTATTCCCTTGAGATCTaGAAAGCAGTCAACATTGAT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGYSLEI*KAVNID
Trigger: ATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTTATTACTCTTAACTaGCTGATTGGCTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHFITLN*LIGSRG
Trigger: TCCTCTAGAGCCAATCAGGCAGTTAAGAGTAATAAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGATTTCTCCATCCCAGTaGAGTCAGACTTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWISPSQ*SQTSWG
Trigger: GCCCCATGAAGTCTGACTGCACTGGGATGGAGAAAT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVADTAP*FSLSLQ
Trigger: TTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVADTAP*FSLSLQ
Trigger: TTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTACTTCAGTTAAGCTaGTCATACATTTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLLQLS*SYIFTL
Trigger: GAGGGTAAAAATGTATGAGCAGCTTAACTGAAGTAG...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCTACTTCAGTTAAGCTaGTCATACATTTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMLLQLS*SYIFTL
Trigger: GAGGGTAAAAATGTATGAGCAGCTTAACTGAAGTAG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SQLGCNHMPIVDVVFILLRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...CAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGCACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTTATGGCAGAGACTTTaGTGTGTTGATCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEILWQRL*CVDHFG
Trigger: GCCAAAGTGATCAACACACCAAAGTCTCTGCCATAA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATATAGGTTGGCTCCTCTaGTGTTTAACAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYIGWLL*CLTASQ
Trigger: CTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGATGCTGACTTTCCAGTaGTCCCAAATCGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGMLTFQ*SQIGDN
Trigger: ATTGTCCCCGATTTGGGATCACTGGAAAGTCAGCAT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
CDS-3UTR TCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTTCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATTCTGGTGGCTGGATTaGAGAAAGCATCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSFWWLD*RKHLYQ
Trigger: TTGATAGAGATGCTTTCTTCAATCCAGCCACCAGAA...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATAAGCTTGTTGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACTCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: HKLVGIEAEELSNEKLHDSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...GTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTC +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGDPETL*NRPIRF
Trigger: GAATCTAATTGGGCGATTTCACAGAGTTTCTGGATC...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTTTCCTGCAGACTCCTTaGCAAAAGGCACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSFLQTP*QKALPT
Trigger: GGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAA...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTTACTCTTAACTGCCTaGTTGGCTCTAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGLLLTA*LALEEA
Trigger: AGCCTCCTCTAGAGCCAATCAGGCAGTTAAGAGTAA...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTTCATGGGGCCTGTCTTaGACTCTGATTGCATCATTA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTSWGLS*TLIASL
Trigger: TAATGATGCAATCAGAGTTCAAGACAGGCCCCATGA...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTCATGGGGCCTGTCTTaGACTCTGATTGCATCATTA +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCSWGLS*TLIASL
Trigger: TAATGATGCAATCAGAGTTCAAGACAGGCCCCATGA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATAGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFIAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTTTCCTTTTCTATGCTaGCATACATGGCGAGTAACT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVFPFLC*HTWRVT
Trigger: AGTTACTCGCCATGTATGTCAGCATAGAAAAGGAAA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTTTCCTTTTCTATGCTaGCATACATGGCGAGTAACT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASFPFLC*HTWRVT
Trigger: AGTTACTCGCCATGTATGTCAGCATAGAAAAGGAAA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCGGCTCGCTGCGGAATaGTTGAACTTCCCCGGTTTT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRLAAE*LNFPGF
Trigger: AAAACCGGGGAAGTTCAATCATTCCGCAGCGAGCCG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp AGCAGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCTGGAGTCCATCTTATGTGGTAAGAGGATCAATTaGGTCTGGGAGTCAATGCTA +
Preference number: 4 (lower is better)
Translates to: SRVAWKNRVSNSLESILCGKRIN*VWESML
Trigger: TAGCATTGACTCCCAGACTCAATTGATCCTCTTACC...ACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR GCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGTAGCAAAACATTCCTaGTCATCTTTTTCATGTCTC +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHVAKHS*SSFSCL
Trigger: GAGACATGAAAAAGATGAGCAGGAATGTTTTGCTAC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
CDS-3UTR GCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHRGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACATGCGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: PMRSSMTMIKASLAAITCAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...GCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TTGTTTTTGAAGTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: LFLKSATLKMERVLLMYPYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...AGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTTTGTTTTTGAAGTCTaGGACTTTGAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGFVFEV*DFEDGE
Trigger: CTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTTGTTTTTGAAGTCTaGGACTTTGAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHFVFEV*DFEDGE
Trigger: CTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: LSNEKLHDNDKSQLGCNHGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...GTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTGGATTAGGACAAATATaGTTCAAAACCTTGCTATCT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGGLGQI*FKTLLS
Trigger: AGATAGCAAGGTTTTGAAGCATATTTGTCCTAATCC...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTAGATATTACATTTGGTaGCTTTCAATATGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGRYYIW*LSICRG
Trigger: CCCTCTACATATTGAAAGGCACCAAATGTAATATCT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTACCCAGAGATATTACATTTGGTaGCTTTCAATATGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: VSRWVSEITIPACGMVTQRYYIW*LSICRG
Trigger: CCCTCTACATATTGAAAGGCACCAAATGTAATATCT...CTGGGTAACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGCTACTTCAGTTAAGCTaGTCATACATTTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGLLQLS*SYIFTL
Trigger: GAGGGTAAAAATGTATGAGCAGCTTAACTGAAGTAG...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGTGAGCCAAGATCATaGCACTGTGTCCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWSEPRS*HCVPAW
Trigger: CCAGGCTGGGACACAGTGGCATGATCTTGGCTCACT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACATGCGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: PMRSSMTMIKASLAAITCGVRYF*IGSVPL
Trigger: TAATGGAACAGACCCAATCCAGAAATACCTGACTCC...GCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFGARRA*QDRSAA
Trigger: TGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGGGATTCTGATAGGTTaGCTCCTCTGGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTGILIG*LLWCLT
Trigger: TGTTAAACACCAGAGGAGCCAACCTATCAGAATCCC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGG +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSRETVK*GPGSTG
Trigger: CCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCATACAGCAGTCAACTaGGAGGCGGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWHTAVN*EAEVAV
Trigger: CACTGCAACCTCCGCCTCCCAGTTGACTGCTGTATG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp GTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTACCCAGTGCATGAACAGCATTTaGAAGAAAGTTTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: VSRWVSEITIPACGMVTQCMNSI*KKVLKT
Trigger: TGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCA...CTGGGTAACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp TTTAAGATAGCTAAAATGTTTCTCAGTCACCGTGCAGTCACTGAACAACACTCCATGCTGACTTTCCAGTaGTCCCAAATCGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: FKIAKMFLSHRAVTEQHSMLTFQ*SQIGDN
Trigger: ATTGTCCCCGATTTGGGATCACTGGAAAGTCAGCAT...GGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAAACATTTTAGCTATCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR TCA 90 bp GATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGCATTTGGAAGAAAGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: DAAWEEVTQPCMNSIWKKVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...TTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: LSNEKLHDNDKSQLGCNHRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...GTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTGCTATGTAGAAGCATaGAGAGTAGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEICYVEA*RVVVDK
Trigger: TTTGTCAACTACTACTCTTCATGCTTCTACATAGCA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATAAGCTTGTTGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: HKLVGIEAEELSNEKLHDMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...GTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTTTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTC +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYDPETL*NRPIRF
Trigger: GAATCTAATTGGGCGATTTCACAGAGTTTCTGGATC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGAGACTTTGGTGTGTTaGTCACTTTGGCATACAGAA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTETLVC*SLWHTE
Trigger: TTCTGTATGCCAAAGTGATCAACACACCAAAGTCTC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGAGTAGACTGCTAGGCTaGGCAAAAGTGAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLSRLLG*AKVRGQ
Trigger: TTGCCCCCTCACTTTTGCTCAGCCTAGCAGTCTACT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCCCTACAATACTGCTTTaGTGGATCCTACATAATTAC +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSPTILL*WILHNY
Trigger: GTAATTATGTAGGATCCATCAAAGCAGTATTGTAGG...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVRGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GGAGGGATTTTTAACATTCTAAATGCTATCTGGAACATCGATGCAGCATGGGAAACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GGIFNILNAIWNIDAAWETDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...TTCCCATGCTGCATCGATGTTCCAGATAGCATTTAGAATGTTAAAAATCCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTTTGTTTTTGAAGTCTaGGACTTTGAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVFVFEV*DFEDGE
Trigger: CTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCTTTGTTTTTGAAGTCTaGGACTTTGAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSFVFEV*DFEDGE
Trigger: CTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAA...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGGATCTTGCTCTTTGTaGGTTTTGATACATCGGGAA +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYGSCSL*VLIHRE
Trigger: TTCCCGATGTATCAAAACGCACAAAGAGCAAGATCC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTATTCCCTTGAGATCTaGAAAGCAGTCAACATTGAT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVYSLEI*KAVNID
Trigger: ATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGTCTTGAACTCTGATTaGATCATTAACACGATCAAG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVVLNSD*IINTIK
Trigger: CTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGTCTTGAACTCTGATTaGATCATTAACACGATCAAG +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVVLNSD*IINTIK
Trigger: CTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGAGATATTACATTTGGTaGCTTTCAATATGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGRYYIW*LSICRG
Trigger: CCCTCTACATATTGAAAGGCACCAAATGTAATATCT...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDADTAP*FSLSLQ
Trigger: TTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACAATCCCCTGAGTATTTaGTCTAATGTTTCAATATGC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYNPLSI*SNVSIC
Trigger: GCATATTGAAACATTAGAGCAAATACTCAGGGGATT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCAGCCTCCCAAATTaGCGACATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFILSLPN*RHYRCE
Trigger: CTCACACCTGTAATGTCGGCAATTTGGGAGGCTGAG...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATAGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFIAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYGVRYF*IGSVPL
Trigger: TAATGGAACAGACCCAATCCAGAAATACCTGACTCC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDGVRYF*IGSVPL
Trigger: TAATGGAACAGACCCAATCCAGAAATACCTGACTCC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGAGGGATTTTTAACATTCTAAATGCTATCTGGAACATCGATGCAGCATGGGAATACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: GGIFNILNAIWNIDAAWEYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...TTCCCATGCTGCATCGATGTTCCAGATAGCATTTAGAATGTTAAAAATCCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFIHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGTGGCACTCCCGTCTTaGCTGCGAATGAGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLVALPS*LRMRKS
Trigger: ACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCAC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCACTGTGTCCCAGCCTaGGCAACAAAGCGAGATACT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWHCVPA*ATKRDT
Trigger: AGTATCTCGCTTTGTTGCCCAGGCTGGGACACAGTG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTTCAGAAAAGGCCTCCTaGAGGCAGGAACATCACCGA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSSEKAS*RQEHHR
Trigger: TCGGTGATGTTCCTGCCTCCAGGAGGCCTTTTCTGA...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423947.7
3UTR CAA 72 bp AATGTTAACAGAGATTCTGCCGTATTCATAAGCTTGTaGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGC +
Preference number: 4 (lower is better)
Translates to: NVNRDSAVFISL*ASRLKSFPMRS
Trigger: GCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATGAATACGGCAGAATCTCTGTTAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGAGGGATTTTTAACATTCTAAATGCTATCTGGAACATCGATGCAGCATGGGAATCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: GGIFNILNAIWNIDAAWESNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...TTCCCATGCTGCATCGATGTTCCAGATAGCATTTAGAATGTTAAAAATCCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTTTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTLQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGTTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: IEAEELSNEKLHDNDKSQLQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...CTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATGCTATGTAGAAGCATaGAGAGTAGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSCYVEA*RVVVDK
Trigger: TTTGTCAACTACTACTCTTCATGCTTCTACATAGCA...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGTTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: IEAEELSNEKLHDNDKSQWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...CTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTTTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGTTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGCTCTTTGTGCGTTTTaGTACATCGGGAATTGCATA +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGALCAF*YIGNCI
Trigger: TATGCAATTCCCGATGTATCAAAACGCACAAAGAGC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAACTGTAAGGAAAAGATaGCCCTGGAACAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGTVRKR*PWNRSS
Trigger: GCTAGATCTGTTCCAGGGTCATCTTTTCCTTACAGT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFLTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTTTCCTTTTCTATGCTaGCATACATGGCGAGTAACT +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDFPFLC*HTWRVT
Trigger: AGTTACTCGCCATGTATGTCAGCATAGAAAAGGAAA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTCGCTGCGGAATGATTaGACTTCCCCGGTTTTACGA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWSLRND*TSPVLR
Trigger: TCGTAAAACCGGGGAAGTTCAATCATTCCGCAGCGA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TTGTTTTTGAAGTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LFLKSATLKMERVLLMYPFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...AGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGGATTAGGACAAATATaGTTCAAAACCTTGCTATCT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVGLGQI*FKTLLS
Trigger: AGATAGCAAGGTTTTGAAGCATATTTGTCCTAATCC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLGTCCF*PCTQLY
Trigger: GTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSHNEGT*CFCPCT
Trigger: TGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTG...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCAAAAGCCTACAATACTaGTTTGATGGATCCTACATA +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSKSLQY*FDGSYI
Trigger: TATGTAGGATCCATCAAAGCAGTATTGTAGGCTTTT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTAAAAGCCTACAATACTaGTTTGATGGATCCTACATA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIKSLQY*FDGSYI
Trigger: TATGTAGGATCCATCAAAGCAGTATTGTAGGCTTTT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSEATYR*SHHCLQ
Trigger: CTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTC...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLEATYR*SHHCLQ
Trigger: CTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGTCTTCACAGGTCCACTaGCACACCCATCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLSSQVH*HTHQFP
Trigger: GGGAAATTGATGGGTGTGGCAGTGGACCTGTGAAGA...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAATCCCCTGAGTATTTaGTCTAATGTTTCAATATGC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVNPLSI*SNVSIC
Trigger: GCATATTGAAACATTAGAGCAAATACTCAGGGGATT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGAATCCCCTGAGTATTTaGTCTAATGTTTCAATATGC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVNPLSI*SNVSIC
Trigger: GCATATTGAAACATTAGAGCAAATACTCAGGGGATT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGGVRYF*IGSVPL
Trigger: TAATGGAACAGACCCAATCCAGAAATACCTGACTCC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp TACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTGACTGAATCTGGCCAAGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: YYLYQMFAQAVEVTESGQGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...TTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATATACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFIYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp AGAAGTCACACAGCCATGCATGAACAGCATTTGGAAGAAAGTTTTGAAGACATATTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: RSHTAMHEQHLEESFEDILCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...TATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFGSRIH*DNSKAY
Trigger: GTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCC...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR CAA 72 bp GGAAGCCACATTCTTTATGGCAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGAAATAAGCCAATTCCT +
Preference number: 4 (lower is better)
Translates to: GSHILYGRDFGV*ITLAYRNKPIP
Trigger: AGGAATTGGCTTATTTCTGTATGCCAAAGTGATCAACACACCAAAGTCTCTGCCATAAAGAATGTGGCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGATGCTGACTTTCCAGTaGTCCCAAATCGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWMLTFQ*SQIGDN
Trigger: ATTGTCCCCGATTTGGGATCACTGGAAAGTCAGCAT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTCTGGTGGCTGGATTaGAGAAAGCATCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGFWWLD*RKHLYQ
Trigger: TTGATAGAGATGCTTTCTTCAATCCAGCCACCAGAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGAGGGATTTTTAACATTCTAAATGCTATCTGGAACATCGATGCAGCATGGGAAACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GGIFNILNAIWNIDAAWETLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...TTCCCATGCTGCATCGATGTTCCAGATAGCATTTAGAATGTTAAAAATCCCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGTCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTTGCTATGTAGAAGCATaGAGAGTAGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTCYVEA*RVVVDK
Trigger: TTTGTCAACTACTACTCTTCATGCTTCTACATAGCA...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGAGGGATTTTTAACATTCTAAATGCTATCTGGAACATCGATGCAGCATGGGAAGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTC +
Preference number: 4 (lower is better)
Translates to: GGIFNILNAIWNIDAAWEDPETL*NRPIRF
Trigger: GAATCTAATTGGGCGATTTCACAGAGTTTCTGGATC...TTCCCATGCTGCATCGATGTTCCAGATAGCATTTAGAATGTTAAAAATCCCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGDPETL*NRPIRF
Trigger: GAATCTAATTGGGCGATTTCACAGAGTTTCTGGATC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGCTCTTTGTGCGTTTTaGTACATCGGGAATTGCATA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGALCAF*YIGNCI
Trigger: TATGCAATTCCCGATGTATCAAAACGCACAAAGAGC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGAGACTTTGGTGTGTTaGTCACTTTGGCATACAGAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGETLVC*SLWHTE
Trigger: TTCTGTATGCCAAAGTGATCAACACACCAAAGTCTC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCCTACAATACTGCTTTaGTGGATCCTACATAATTAC +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCPTILL*WILHNY
Trigger: GTAATTATGTAGGATCCATCAAAGCAGTATTGTAGG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAAGGGAAGACTTTGGTaGCAGTTTATAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGKGRLW*QFIRWP
Trigger: AGGCCATCTTATAAACTGTCACCAAAGTCTTCCCTT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGAAGTCACACAGCCATGCATGAACAGCATTTGGAAGAAAGTTTTGAAGACATACACAGGCTGTTGAAGTaGCTGAATCTGGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: RSHTAMHEQHLEESFEDIHRLLK*LNLAKY
Trigger: ATATTTGGCCAGATTCAGTCACTTCAACAGCCTGTG...TATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTTTGTTTTTGAAGTCTaGGACTTTGAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYFVFEV*DFEDGE
Trigger: CTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTTTGTTTTTGAAGTCTaGGACTTTGAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCFVFEV*DFEDGE
Trigger: CTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GGAGGGATTTTTAACATTCTAAATGCTATCTGGAACATCGATGCAGCATGGGAAAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: GGIFNILNAIWNIDAAWEKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...TTCCCATGCTGCATCGATGTTCCAGATAGCATTTAGAATGTTAAAAATCCCTCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGGATCTTGCTCTTTGTaGGTTTTGATACATCGGGAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGGSCSL*VLIHRE
Trigger: TTCCCGATGTATCAAAACGCACAAAGAGCAAGATCC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTTTCTCTCTGGATCTTaGTCTTTGTGCGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYFLSGS*SLCVLI
Trigger: TATCAAAACGCACAAAGAGCAAGATCCAGAGAGAAA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGGATTAGGACAAATATaGTTCAAAACCTTGCTATCT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSGLGQI*FKTLLS
Trigger: AGATAGCAAGGTTTTGAAGCATATTTGTCCTAATCC...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTATTCCCTTGAGATCTaGAAAGCAGTCAACATTGAT +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDYSLEI*KAVNID
Trigger: ATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCTTGAACTCTGATTaGATCATTAACACGATCAAG +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTVLNSD*IINTIK
Trigger: CTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGTCTTGAACTCTGATTaGATCATTAACACGATCAAG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCVLNSD*IINTIK
Trigger: CTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTCTTCACAGGTCCACTaGCACACCCATCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFSSQVH*HTHQFP
Trigger: GGGAAATTGATGGGTGTGGCAGTGGACCTGTGAAGA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCTACTTCAGTTAAGCTaGTCATACATTTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCLLQLS*SYIFTL
Trigger: GAGGGTAAAAATGTATGAGCAGCTTAACTGAAGTAG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATAGAAGTCACACAGCCATaGATGAACAGCATTTGGAAG +
Preference number: 4 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFIEVTQP*MNSIWK
Trigger: CTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTC...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGGVRYF*IGSVPL
Trigger: TAATGGAACAGACCCAATCCAGAAATACCTGACTCC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTCACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTCACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTATGGCAGAGACTTTaGTGTGTTGATCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLWQRL*CVDHFG
Trigger: GCCAAAGTGATCAACACACCAAAGTCTCTGCCATAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATATTCTGGTGGCTGGATTaGAGAAAGCATCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFIFWWLD*RKHLYQ
Trigger: TTGATAGAGATGCTTTCTTCAATCCAGCCACCAGAA...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTGAATGGACAATTCGGTaGGTCCTTGACGCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFEWTIR*VLDASY
Trigger: GTAAGAAGCGTCAAGGACTCACCGAATTGTCCATTC...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR GCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGRGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTAAAAGCCTACAATACTaGTTTGATGGATCCTACATA +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCKSLQY*FDGSYI
Trigger: TATGTAGGATCCATCAAAGCAGTATTGTAGGCTTTT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTAGATATTACATTTGGTaGCTTTCAATATGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCRYYIW*LSICRG
Trigger: CCCTCTACATATTGAAAGGCACCAAATGTAATATCT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTAATCCCCTGAGTATTTaGTCTAATGTTTCAATATGC +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTNPLSI*SNVSIC
Trigger: GCATATTGAAACATTAGAGCAAATACTCAGGGGATT...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp TACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTGACTGAATCTGGCCAAAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: YYLYQMFAQAVEVTESGQRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...TTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATAATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFIISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTTTCTGGTGGCTGGATTaGAGAAAGCATCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSFWWLD*RKHLYQ
Trigger: TTGATAGAGATGCTTTCTTCAATCCAGCCACCAGAA...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTTCTGGTGGCTGGATTaGAGAAAGCATCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWFWWLD*RKHLYQ
Trigger: TTGATAGAGATGCTTTCTTCAATCCAGCCACCAGAA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATGCTATGTAGAAGCATaGAGAGTAGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGCYVEA*RVVVDK
Trigger: TTTGTCAACTACTACTCTTCATGCTTCTACATAGCA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTGACTGAATCTGGCCAATTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: YYLYQMFAQAVEVTESGQLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...TTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWDPETL*NRPIRF
Trigger: GAATCTAATTGGGCGATTTCACAGAGTTTCTGGATC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTC +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLDPETL*NRPIRF
Trigger: GAATCTAATTGGGCGATTTCACAGAGTTTCTGGATC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTGCTCTTTGTGCGTTTTaGTACATCGGGAATTGCATA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSALCAF*YIGNCI
Trigger: TATGCAATTCCCGATGTATCAAAACGCACAAAGAGC...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTCATGGGGCCTGTCTTaGACTCTGATTGCATCATTA +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFSWGLS*TLIASL
Trigger: TAATGATGCAATCAGAGTTCAAGACAGGCCCCATGA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTCTATCTTGAGCACATaGAACAATGCTGGCCACATA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWSILST*NNAGHI
Trigger: TATGTGGCCAGCATTGTTTCATGTGCTCAAGATAGA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp GGAGGGATTTTTAACATTCTAAATGCTATCTGGAACATCGATGCAGCATGGGAAAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: GGIFNILNAIWNIDAAWERGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...TTCCCATGCTGCATCGATGTTCCAGATAGCATTTAGAATGTTAAAAATCCCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGRGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTTGTTTTTGAAGTCTaGGACTTTGAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGFVFEV*DFEDGE
Trigger: CTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTTCTCTCTGGATCTTaGTCTTTGTGCGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGFLSGS*SLCVLI
Trigger: TATCAAAACGCACAAAGAGCAAGATCCAGAGAGAAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATATTCCCTTGAGATCTaGAAAGCAGTCAACATTGAT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGYSLEI*KAVNID
Trigger: ATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLADTAP*FSLSLQ
Trigger: TTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWGVRYF*IGSVPL
Trigger: TAATGGAACAGACCCAATCCAGAAATACCTGACTCC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSGVRYF*IGSVPL
Trigger: TAATGGAACAGACCCAATCCAGAAATACCTGACTCC...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTTTATGGCAGAGACTTTaGTGTGTTGATCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSLWQRL*CVDHFG
Trigger: GCCAAAGTGATCAACACACCAAAGTCTCTGCCATAA...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTTCTGGTGGCTGGATTaGAGAAAGCATCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFFWWLD*RKHLYQ
Trigger: TTGATAGAGATGCTTTCTTCAATCCAGCCACCAGAA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGAAGTCACACAGCCATGCATGAACAGCATTTGGAAGAAAGTTTTGAAGACATAGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: RSHTAMHEQHLEESFEDIDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...TATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGTCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWLQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTTTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSLQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTC +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFDPETL*NRPIRF
Trigger: GAATCTAATTGGGCGATTTCACAGAGTTTCTGGATC...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTC +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFDPETL*NRPIRF
Trigger: GAATCTAATTGGGCGATTTCACAGAGTTTCTGGATC...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTGCTCTTTGTGCGTTTTaGTACATCGGGAATTGCATA +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFALCAF*YIGNCI
Trigger: TATGCAATTCCCGATGTATCAAAACGCACAAAGAGC...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTAAGGGAAGACTTTGGTaGCAGTTTATAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFKGRLW*QFIRWP
Trigger: AGGCCATCTTATAAACTGTCACCAAAGTCTTCCCTT...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp AGAAGTCACACAGCCATGCATGAACAGCATTTGGAAGAAAGTTTTGAAGACATATTTGTTTTTGAAGTCTaGGACTTTGAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: RSHTAMHEQHLEESFEDIFVFEV*DFEDGE
Trigger: CTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAA...TATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTTATGGCAGAGACTTTaGTGTGTTGATCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFLWQRL*CVDHFG
Trigger: GCCAAAGTGATCAACACACCAAAGTCTCTGCCATAA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCACATGAAACAATGCTaGCCACATAATAGACACACA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWHMKQC*PHNRHT
Trigger: TGTGTGTCTATTATGTGGCCAGCATTGTTTCATGTG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFLQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFLQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTGCTATGTAGAAGCATaGAGAGTAGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWCYVEA*RVVVDK
Trigger: TTTGTCAACTACTACTCTTCATGCTTCTACATAGCA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp TACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTGACTGAATCTGGCCAATGCTATGTAGAAGCATaGAGAGTAGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: YYLYQMFAQAVEVTESGQCYVEA*RVVVDK
Trigger: TTTGTCAACTACTACTCTTCATGCTTCTACATAGCA...TTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGTGCTATGTAGAAGCATaGAGAGTAGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLCYVEA*RVVVDK
Trigger: TTTGTCAACTACTACTCTTCATGCTTCTACATAGCA...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGCCTACAATACTGCTTTaGTGGATCCTACATAATTAC +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLPTILL*WILHNY
Trigger: GTAATTATGTAGGATCCATCAAAGCAGTATTGTAGG...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSRGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTGACTGAATCTGGCCAAATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: YYLYQMFAQAVEVTESGQIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...TTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTTTGTTTTTGAAGTCTaGGACTTTGAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWFVFEV*DFEDGE
Trigger: CTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGTTTCTCTCTGGATCTTaGTCTTTGTGCGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLFLSGS*SLCVLI
Trigger: TATCAAAACGCACAAAGAGCAAGATCCAGAGAGAAA...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGTTTATTACTCTTAACTaGCTGATTGGCTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLFITLN*LIGSRG
Trigger: TCCTCTAGAGCCAATCAGGCAGTTAAGAGTAATAAA...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGACATATAAAAGCTTGTaGGTTGCAGCTCAAATACGA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWTYKSL*VAAQIR
Trigger: TCGTATTTGAGCTGCAACCCACAAGCTTTTATATGT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATAGCAATATGGTTTCTATaGACTGTGTATTCAATGCAT +
Preference number: 4 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFIAIWFL*TVYSMH
Trigger: ATGCATTGAATACACAGTCCATAGAAACCATATTGC...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFRGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTTTATTACTCTTAACTaGCTGATTGGCTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFFITLN*LIGSRG
Trigger: TCCTCTAGAGCCAATCAGGCAGTTAAGAGTAATAAA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGAAAAGCCTACAATACTaGTTTGATGGATCCTACATA +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLKSLQY*FDGSYI
Trigger: TATGTAGGATCCATCAAAGCAGTATTGTAGGCTTTT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGAGATATTACATTTGGTaGCTTTCAATATGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLRYYIW*LSICRG
Trigger: CCCTCTACATATTGAAAGGCACCAAATGTAATATCT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGAATCCCCTGAGTATTTaGTCTAATGTTTCAATATGC +
Preference number: 4 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLNPLSI*SNVSIC
Trigger: GCATATTGAAACATTAGAGCAAATACTCAGGGGATT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTCTACTTCAGTTAAGCTaGTCATACATTTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFLLQLS*SYIFTL
Trigger: GAGGGTAAAAATGTATGAGCAGCTTAACTGAAGTAG...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR CAA 72 bp ACACAGCCATGCATGAACAGCATTTGGAAGAAAGTTTaGAAGACATATGTGAACACATTCAAAATGTTAACA +
Preference number: 4 (lower is better)
Translates to: TQPCMNSIWKKV*KTYVNTFKMLT
Trigger: TGTTAACATTTTGAATGTGTTCACATATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTAGATATTACATTTGGTaGCTTTCAATATGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFRYYIW*LSICRG
Trigger: CCCTCTACATATTGAAAGGCACCAAATGTAATATCT...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CCA 90 bp CCTGCTCATCTTTTTCATGTCTCCCTCAGAAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCCCGGGTTCCAGAACGGCGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: PAHLFHVSLRRRLRT*REVGGSRVPERRGS
Trigger: AGAGCCGCGCCGTTCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTTCTGAGGGAGACATGAAAAAGATGAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000550630.5
ENST00000680201.1
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CAA 90 bp AAAAGGCCTCCTGGAGGCAGGAACATCACCTGTGGTCCCAGATACGCAGGAGGTAAGGCGGCTCCGAACTaGGCGCGAAGTTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: KRPPGGRNITCGPRYAGGKAAPN*ARSWGL
Trigger: GAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTT...ACCTCCTGCGTATCTGGGACCACAGGTGATGTTCCTGCCTCCAGGAGGCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CAA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGAGTGGCACTCCCGTCTaGGCTGCGAATGAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLSGTPV*AANEKE
Trigger: CTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACT...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS CCA 90 bp CCAGGCTGGATGGGAGGTGAGTATGAGGAGTCAGAAAAGGCCTCCTaGAGGCAGGAACATCACCGATATCCCCATCGTCGTCGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PGWMGGEYEESEKAS*RQEHHRYPHRRRPP
Trigger: AGGAGGACGACGACGATGGGGATATCGGTGATGTTCCTGCCTCCAGGAGGCCTTTTCTGACTCCTCATACTCACCTCCCATCCAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423947.7
CDS-3UTR CAA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCAC +
Preference number: 5 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLIPADS*TKGTPH
Trigger: GTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAAT...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAACTTGGCGCGAAGTaGGGGGCTCCCGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGELGAK*GAPGFQ
Trigger: CTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTTC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CAA 90 bp GAGGTTCTAAAAGGAAAAGCGACTTGTCCACAGAGGTCTGAGAGCAGGGTTGCAGAACTTGGCGCGAAGTaGGGGGCTCCCGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: EVLKGKATCPQRSESRVAELGAK*GAPGFQ
Trigger: CTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTTC...TGCAACCCTGCTCTCAGACCTCTGTGGACAAGTCGCTTTTCCTTTTAGAACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CAA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAGGCGGCTCCGAACTaGGCGCGAAGTTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVKAAPN*ARSWGL
Trigger: GAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS GCA 90 bp CGACAAACCTATAACACATACAGCAGTCAACTGGGAGGCGGAGGTTaGAGTGAGCCAAGATCATGCCACTGTGTCCCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: RQTYNTYSSQLGGGG*SEPRSCHCVPAWAT
Trigger: TGTTGCCCAGGCTGGGACACAGTGGCATGATCTTGGCTCACTGCAACCTCCGCCTCCCAGTTGACTGCTGTATGTGTTATAGGTTTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS GCA 90 bp CTGCATGTTTCCAATGTCACCCAAGTATTCCAAGTGGCACGAAGCTaGCCGAGAACAGTGGTCAGCCGAGGGCTGAAAAGGGACCAGTAC +
Preference number: 5 (lower is better)
Translates to: LHVSNVTQVFQVARS*PRTVVSRGLKRDQY
Trigger: GTACTGGTCCCTTTTCAGCCCTCGGCTGACCACTGTTCTCGGGCAGCTTCGTGCCACTTGGAATACTTGGGTGACATTGGAAACATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551667.1
CDS-3UTR CAA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAAGGCGGCTCCGAACTaGGCGCGAAGTTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSKAAPN*ARSWGL
Trigger: GAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTT...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CAA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGAAGATGGAGAGAGTGTaGTTGATGTACCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLKMERV*LMYPSM
Trigger: CATGGAAGGGTACATCAACAACACTCTCTCCATCTT...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGATGATAAAAGCCAGCTaGGCTGCAATCACATGCCAA +
Preference number: 5 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLMIKAS*AAITCQ
Trigger: TTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCAT...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTTATTGTCAGCTGAGTaGTCAGTTCAAGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLLLSAE*SVQEDS
Trigger: GCTGTCTTCTTGAACTGACAACTCAGCTGACAATAA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATACCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIPCSNV*GFLWYQ
Trigger: CTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGG...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCAGAATTGCTATTCCTaGCATGATGGGCTGCCATGC +
Preference number: 5 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSQNCYS*HDGLPC
Trigger: GCATGGCAGCCCATCATGCAAGGAATAGCAATTCTG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGA +
Preference number: 5 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLRDFGV*ITLAYR
Trigger: TCTGTATGCCAAAGTGATCAACACACCAAAGTCTCT...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAAGTGGCACTCCCGTCTaGGCTGCGAATGAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRSGTPV*AANEKE
Trigger: CTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGAGTGGCACTCCCGTCTaGGCTGCGAATGAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMSGTPV*AANEKE
Trigger: CTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGAAGGCGGCTCCGAACTaGGCGCGAAGTTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGKAAPN*ARSWGL
Trigger: GAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320560.13
ENST00000423947.7
CDS-3UTR CAA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGAAGGCGGCTCCGAACTaGGCGCGAAGTTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWKAAPN*ARSWGL
Trigger: GAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320560.13
ENST00000423947.7
CDS-3UTR CAA 90 bp CAACACCAGGCTGGATGGGAGGTGAGTATGAGGAGTCAGAAAAGGCCTCCTGGACCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: QHQAGWEVSMRSQKRPPGPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...TCCAGGAGGCCTTTTCTGACTCCTCATACTCACCTCCCATCCAGCCTGGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CAA 90 bp GGCTTTCTCTGGTACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: GFLWYQASKLGGQFPCVHPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...GTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CAA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGAGTTTACAAGTCTGTaGATCCCAAACTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLEFTSL*IPNLLT
Trigger: TGTTAGCAAGTTTGGGATCAACAGACTTGTAAACTC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMPCSNV*GFLWYQ
Trigger: CTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRPCSNV*GFLWYQ
Trigger: CTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAACCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKPCSNV*GFLWYQ
Trigger: CTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGG...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTTTTCTCTCTGGATCTaGCTCTTTGTGCGTTTTGAT +
Preference number: 5 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLFSLWI*LFVRFD
Trigger: ATCAAAACGCACAAAGAGCAAGATCCAGAGAGAAAA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTACAACTTTGCTCTTTaGGGCATCTTAACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLYNFAL*GILTVS
Trigger: TGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS TCA 90 bp TTCTCTGTACAGAAGGTACCGTTCATTAGGGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCAATCATGGAGTGGGAAAGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: FSVQKVPFIRAAGIL*LTAEFAIMEWESCL
Trigger: AAGGCAGCTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGCCCTAATGAACGGTACCTTCTGTACAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGAACTTGGCGCGAAGTaGGGGGCTCCCGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGELGAK*GAPGFQ
Trigger: CTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTTC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680201.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAAGGCGGCTCCGAACTaGGCGCGAAGTTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGKAAPN*ARSWGL
Trigger: GAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680201.1
CDS-3UTR CAA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCTTCTGGTGGCTGGATaGAAGAAAGCATCTCTATCA +
Preference number: 5 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSLLVAG*KKASLS
Trigger: TGATAGAGATGCTTTCTTCAATCCAGCCACCAGAAG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACCCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: CRHSSMLFFITASQPWTHPCSNV*GFLWYQ
Trigger: CTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGG...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAACAGAATTGCTATTCCTaGCATGATGGGCTGCCATGC +
Preference number: 5 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKQNCYS*HDGLPC
Trigger: GCATGGCAGCCCATCATGCAAGGAATAGCAATTCTG...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTATGGAGAGAGTGTTGTaGATGTACCCTTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: LGVSRWVSEITIPACGMVMERVL*MYPSMV
Trigger: CACCATGGAAGGGTACATCAACAACACTCTCTCCAT...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCAC +
Preference number: 5 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYIPADS*TKGTPH
Trigger: GTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCAATTCGGTGAGTCCTaGACGCTTCTTACCCTCCTA +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMQFGES*TLLTLL
Trigger: TAGGAGGGTAAGAAGCGTCAAGGACTCACCGAATTG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR CAA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCAATTCGGTGAGTCCTaGACGCTTCTTACCCTCCTA +
Preference number: 5 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHQFGES*TLLTLL
Trigger: TAGGAGGGTAAGAAGCGTCAAGGACTCACCGAATTG...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR CAA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
CDS-3UTR CAA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATACATCCAATACTGATCTaGTTGCTTCTAACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIHPILI*LLLTAG
Trigger: GCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATG...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCGGTTTTTCAGATCATaGGGTTTCAGAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSRFFRS*GFRGNL
Trigger: CAAATTGCCTCTGAAACCCAATGATCTGAAAAACCG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTCTACACTGAGGACTTaGGTAAACCAGTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSSTLRT*VNQLSV
Trigger: TACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTGGCAGTGAAAAACTCTaGCTCTGGCTTGATGATGCT +
Preference number: 5 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFGSEKL*LWLDDA
Trigger: AGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCC...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGGCAGTGAAAAACTCTaGCTCTGGCTTGATGATGCT +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMGSEKL*LWLDDA
Trigger: AGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGGCAGTGAAAAACTCTaGCTCTGGCTTGATGATGCT +
Preference number: 5 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKGSEKL*LWLDDA
Trigger: AGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATACTTCTGGTGGCTGGATaGAAGAAAGCATCTCTATCA +
Preference number: 5 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILLVAG*KKASLS
Trigger: TGATAGAGATGCTTTCTTCAATCCAGCCACCAGAAG...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACCAGAATTGCTATTCCTaGCATGATGGGCTGCCATGC +
Preference number: 5 (lower is better)
Translates to: CRHSSMLFFITASQPWTHQNCYS*HDGLPC
Trigger: GCATGGCAGCCCATCATGCAAGGAATAGCAATTCTG...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCAGAATTGCTATTCCTaGCATGATGGGCTGCCATGC +
Preference number: 5 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYQNCYS*HDGLPC
Trigger: GCATGGCAGCCCATCATGCAAGGAATAGCAATTCTG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGCTATGATCATGGCATaGGTCACCACAGCCAGAATT +
Preference number: 5 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKAMIMA*VTTARI
Trigger: AATTCTGGCTGTGGTGACCAATGCCATGATCATAGC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATATGGAGAGAGTGTTGTaGATGTACCCTTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHMERVL*MYPSMV
Trigger: CACCATGGAAGGGTACATCAACAACACTCTCTCCAT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCCCTTGCTTTTGTTTTaGAAGTCTGCGACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSPLLLF*KSATLK
Trigger: CTTCAAAGTCGCAGACTTCAAAAACAAAAGCAAGGG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGAGTACGGGTTTCCCTaGCTTTTGTTTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSEYGFP*LLFLKS
Trigger: AGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGCAAAGCAGTCAACATaGATTAGGCACGGAACCTCC +
Preference number: 5 (lower is better)
Translates to: CRHSSMLFFITASQPWTHAKQST*IRHGTS
Trigger: GGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTGC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCAC +
Preference number: 5 (lower is better)
Translates to: AATIVCRHSSMLFFITASIPADS*TKGTPH
Trigger: GTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAAT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATGGGATTCTGATAGGTaGGCTCCTCTGGTGTTTAAC +
Preference number: 5 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRWDSDR*APLVFN
Trigger: GTTAAACACCAGAGGAGCCAACCTATCAGAATCCCA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGTGGGATTCTGATAGGTaGGCTCCTCTGGTGTTTAAC +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMWDSDR*APLVFN
Trigger: GTTAAACACCAGAGGAGCCAACCTATCAGAATCCCA...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGAACTTGGCGCGAAGTaGGGGGCTCCCGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWELGAK*GAPGFQ
Trigger: CTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTTC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAAGGCGGCTCCGAACTaGGCGCGAAGTTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWKAAPN*ARSWGL
Trigger: GAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACCAATACTGATCTTGTaGCTTCTAACTGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRPILIL*LLTAGH
Trigger: ATGGCCTGCAGTTAGAAGCAACAAGATCAGTATTGG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCCAATACTGATCTTGTaGCTTCTAACTGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHPILIL*LLTAGH
Trigger: ATGGCCTGCAGTTAGAAGCAACAAGATCAGTATTGG...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTCCAATACTGATCTTGTaGCTTCTAACTGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGPILIL*LLTAGH
Trigger: ATGGCCTGCAGTTAGAAGCAACAAGATCAGTATTGG...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCCAATACTGATCTTGTaGCTTCTAACTGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMPILIL*LLTAGH
Trigger: ATGGCCTGCAGTTAGAAGCAACAAGATCAGTATTGG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAACATCCAATACTGATCTaGTTGCTTCTAACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKHPILI*LLLTAG
Trigger: GCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATG...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAACTTTGGTAAACCAGTaGAGTGTACCAAAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRTLVNQ*SVPKAE
Trigger: CTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTACTTTGGTAAACCAGTaGAGTGTACCAAAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFTLVNQ*SVPKAE
Trigger: CTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGT...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACTTTGGTAAACCAGTaGAGTGTACCAAAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMTLVNQ*SVPKAE
Trigger: CTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMNSCSG*MMLSST
Trigger: TGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTTCTGGTGGCTGGATaGAAGAAAGCATCTCTATCA +
Preference number: 5 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLLVAG*KKASLS
Trigger: TGATAGAGATGCTTTCTTCAATCCAGCCACCAGAAG...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACATGGAGAGAGTGTTGTaGATGTACCCTTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: CRHSSMLFFITASQPWTHMERVL*MYPSMV
Trigger: CACCATGGAAGGGTACATCAACAACACTCTCTCCAT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAAAGATGGAGAGAGTGTaGTTGATGTACCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKKMERV*LMYPSM
Trigger: CATGGAAGGGTACATCAACAACACTCTCTCCATCTT...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGAAGATGGAGAGAGTGTaGTTGATGTACCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMKMERV*LMYPSM
Trigger: CATGGAAGGGTACATCAACAACACTCTCTCCATCTT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATACCCTTGCTTTTGTTTTaGAAGTCTGCGACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIPLLLF*KSATLK
Trigger: CTTCAAAGTCGCAGACTTCAAAAACAAAAGCAAGGG...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGATGATAAAAGCCAGCTaGGCTGCAATCACATGCCAA +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMMIKAS*AAITCQ
Trigger: TTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCAT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGTCTGGATCTTGCTCTTaGTGCGTTTTGATACATCGG +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMSGSCS*CVLIHR
Trigger: CCGATGTATCAAAACGCACAAAGAGCAAGATCCAGA...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTTTCTCTCTGGATCTaGCTCTTTGTGCGTTTTGAT +
Preference number: 5 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSFSLWI*LFVRFD
Trigger: ATCAAAACGCACAAAGAGCAAGATCCAGAGAGAAAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGCAAAGCAGTCAACATaGATTAGGCACGGAACCTCC +
Preference number: 5 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIAKQST*IRHGTS
Trigger: GGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTGC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTTCATGGGGCCTGTCTaGAACTCTGATTGCATCATT +
Preference number: 5 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSFMGPV*NSDCII
Trigger: AATGATGCAATCAGAGTTCAAGACAGGCCCCATGAA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TTTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGTGAGGATATCTACTGCGGTCTGAGAGCAGGGTaGCATGGAAAAACAGGGTTT +
Preference number: 5 (lower is better)
Translates to: FLSHRAVTEQHSSEDIYCGLRAG*HGKTGF
Trigger: AAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACC...GCAGTAGATATCCTCACTGGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS GCA 90 bp GGCTTTCTCTGGTACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATaGGTCCACTCTTATTTCCAATATATTGTTCACGAGAGCCAACAG +
Preference number: 5 (lower is better)
Translates to: GFLWYQASKLGGQFP*VHSYFQYIVHESQQ
Trigger: CTGTTGGCTCTCGTGAACAATATATTGGAAATAAGAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CCA 90 bp ATGGAGGCCGTGATGGACGTGGCTGTCTGTGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTAATGTTCTTGGGAAGTTTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: MEAVMDVAVCGVRYF*IGSVPLMFLGSFAE
Trigger: TTCTGCAAAACTTCCCAAGAACATTAATGGAACAGACCCAATCCAGAAATACCTGACTCCACAGACAGCCACGTCCATCACGGCCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTGAACTTGGCGCGAAGTaGGGGGCTCCCGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFELGAK*GAPGFQ
Trigger: CTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTTC...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CAA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTCTACACTGAGGACTTaGGTAAACCAGTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHSTLRT*VNQLSV
Trigger: TACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: CRHSSMLFFITASQPWTHNSCSG*MMLSST
Trigger: TGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACCTTCTGGTGGCTGGATaGAAGAAAGCATCTCTATCA +
Preference number: 5 (lower is better)
Translates to: CRHSSMLFFITASQPWTHLLVAG*KKASLS
Trigger: TGATAGAGATGCTTTCTTCAATCCAGCCACCAGAAG...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCTTCTGGTGGCTGGATaGAAGAAAGCATCTCTATCA +
Preference number: 5 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLLVAG*KKASLS
Trigger: TGATAGAGATGCTTTCTTCAATCCAGCCACCAGAAG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGCTTCTGGTGGCTGGATaGAAGAAAGCATCTCTATCA +
Preference number: 5 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGLLVAG*KKASLS
Trigger: TGATAGAGATGCTTTCTTCAATCCAGCCACCAGAAG...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTATTGTCAGCTGAGTaGTCAGTTCAAGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLLSAE*SVQEDS
Trigger: GCTGTCTTCTTGAACTGACAACTCAGCTGACAATAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATTATTGTCAGCTGAGTaGTCAGTTCAAGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKLLSAE*SVQEDS
Trigger: GCTGTCTTCTTGAACTGACAACTCAGCTGACAATAA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACAGAATTGCTATTCCTaGCATGATGGGCTGCCATGC +
Preference number: 5 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSQNCYS*HDGLPC
Trigger: GCATGGCAGCCCATCATGCAAGGAATAGCAATTCTG...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGCTATGATCATGGCATaGGTCACCACAGCCAGAATT +
Preference number: 5 (lower is better)
Translates to: AATIVCRHSSMLFFITASAMIMA*VTTARI
Trigger: AATTCTGGCTGTGGTGACCAATGCCATGATCATAGC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTACCCAGCCCTTGCTTTTGTTTTaGAAGTCTGCGACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: VSRWVSEITIPACGMVTQPLLLF*KSATLK
Trigger: CTTCAAAGTCGCAGACTTCAAAAACAAAAGCAAGGG...CTGGGTAACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CAA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCGAGTACGGGTTTCCCTaGCTTTTGTTTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSEYGFP*LLFLKS
Trigger: AGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTC...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGAGTACGGGTTTCCCTaGCTTTTGTTTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMEYGFP*LLFLKS
Trigger: AGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATGATAAAAGCCAGCTaGGCTGCAATCACATGCCAA +
Preference number: 5 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYMIKAS*AAITCQ
Trigger: TTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTCTGGATCTTGCTCTTaGTGCGTTTTGATACATCGG +
Preference number: 5 (lower is better)
Translates to: CRHSSMLFFITASQPWTHSGSCS*CVLIHR
Trigger: CCGATGTATCAAAACGCACAAAGAGCAAGATCCAGA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGA +
Preference number: 5 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGRDFGV*ITLAYR
Trigger: TCTGTATGCCAAAGTGATCAACACACCAAAGTCTCT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGA +
Preference number: 5 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRRDFGV*ITLAYR
Trigger: TCTGTATGCCAAAGTGATCAACACACCAAAGTCTCT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTCATGGGGCCTGTCTaGAACTCTGATTGCATCATT +
Preference number: 5 (lower is better)
Translates to: CRHSSMLFFITASQPWTHFMGPV*NSDCII
Trigger: AATGATGCAATCAGAGTTCAAGACAGGCCCCATGAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTTCATGGGGCCTGTCTaGAACTCTGATTGCATCATT +
Preference number: 5 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYFMGPV*NSDCII
Trigger: AATGATGCAATCAGAGTTCAAGACAGGCCCCATGAA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGAGTGGCACTCCCGTCTaGGCTGCGAATGAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGSGTPV*AANEKE
Trigger: CTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTTACAACTTTGCTCTTTaGGGCATCTTAACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LGVSRWVSEITIPACGMVYNFAL*GILTVS
Trigger: TGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTA...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS TCA 90 bp TTCCTGATAAGATCCAAGGGCTGCTTTTTGTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGAAGGTACCGTTCATTAGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: FLIRSKGCFLYMLRG*AHSLYRRYRSLGQL
Trigger: CAGCTGCCCTAATGAACGGTACCTTCTGTACAGAGAATGGGCTCATCCTCGAAGCATATACAAAAAGCAGCCCTTGGATCTTATCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS TCA 90 bp ACATCCTACACAATGCAGATTTTGATTGACTCCTCTCCCAGTCTATaGCTAAGATGTGGCCAGGGCTGCATGTTTCCAATGTCACCCAAG +
Preference number: 5 (lower is better)
Translates to: TSYTMQILIDSSPSL*LRCGQGCMFPMSPK
Trigger: CTTGGGTGACATTGGAAACATGCAGCCCTGGCCACATCTTAGTCATAGACTGGGAGAGGAGTCAATCAAAATCTGCATTGTGTAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551667.1
CDS CCA 90 bp CATGCTCCAATGTCTTGGGCTTTCTCTGGTACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCGTCCACTCTTATTTCCAATATATTG +
Preference number: 5 (lower is better)
Translates to: HAPMSWAFSGTRRLN*VVSFHASTLISNIL
Trigger: CAATATATTGGAAATAAGAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGACATTGGAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGCCAATACTGATCTTGTaGCTTCTAACTGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVPILIL*LLTAGH
Trigger: ATGGCCTGCAGTTAGAAGCAACAAGATCAGTATTGG...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GATCATGTCCGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATCATCCAATACTGATCTaGTTGCTTCTAACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: DHVRRESYDHGIGHHSQNHPILI*LLLTAG
Trigger: GCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATG...ATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCGGACATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGCGGTTTTTCAGATCATaGGGTTTCAGAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGRFFRS*GFRGNL
Trigger: CAAATTGCCTCTGAAACCCAATGATCTGAAAAACCG...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCGGTTTTTCAGATCATaGGGTTTCAGAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYRFFRS*GFRGNL
Trigger: CAAATTGCCTCTGAAACCCAATGATCTGAAAAACCG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCACTTTGGTAAACCAGTaGAGTGTACCAAAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LIASLTRSRETVKWGPGSTLVNQ*SVPKAE
Trigger: CTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACTTTGGTAAACCAGTaGAGTGTACCAAAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVTLVNQ*SVPKAE
Trigger: CTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTCTACACTGAGGACTTaGGTAAACCAGTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGSTLRT*VNQLSV
Trigger: TACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVNSCSG*MMLSST
Trigger: TGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVNSCSG*MMLSST
Trigger: TGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGGCAGTGAAAAACTCTaGCTCTGGCTTGATGATGCT +
Preference number: 5 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSGSEKL*LWLDDA
Trigger: AGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCC...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGAGTTTACAAGTCTGTaGATCCCAAACTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKEFTSL*IPNLLT
Trigger: TGTTAGCAAGTTTGGGATCAACAGACTTGTAAACTC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCTATGATCATGGCATaGGTCACCACAGCCAGAATT +
Preference number: 5 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSAMIMA*VTTARI
Trigger: AATTCTGGCTGTGGTGACCAATGCCATGATCATAGC...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAAGATGGAGAGAGTGTaGTTGATGTACCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: AATIVCRHSSMLFFITASKMERV*LMYPSM
Trigger: CATGGAAGGGTACATCAACAACACTCTCTCCATCTT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATTGCTATTCCAAGATGGAGAGAGTGTaGTTGATGTACCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: RRESYDHGIGHHSQNCYSKMERV*LMYPSM
Trigger: CATGGAAGGGTACATCAACAACACTCTCTCCATCTT...GGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CAA 90 bp ACAGCCAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCTTGGCCCTTGCTTTTGTTTTaGAAGTCTGCGACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: TARIAIPCMMGCHAPMSWPLLLF*KSATLK
Trigger: CTTCAAAGTCGCAGACTTCAAAAACAAAAGCAAGGG...CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAGTACGGGTTTCCCTaGCTTTTGTTTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGEYGFP*LLFLKS
Trigger: AGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTATGATAAAAGCCAGCTaGGCTGCAATCACATGCCAA +
Preference number: 5 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIMIKAS*AAITCQ
Trigger: TTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCAT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTGCTCTTTGTGCGTTTaGATACATCGGGAATTGCAT +
Preference number: 5 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGCSLCV*IHRELH
Trigger: ATGCAATTCCCGATGTATCAAAACGCACAAAGAGCA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTCTGGATCTTGCTCTTaGTGCGTTTTGATACATCGG +
Preference number: 5 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVSGSCS*CVLIHR
Trigger: CCGATGTATCAAAACGCACAAAGAGCAAGATCCAGA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTCTGGATCTTGCTCTTaGTGCGTTTTGATACATCGG +
Preference number: 5 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVSGSCS*CVLIHR
Trigger: CCGATGTATCAAAACGCACAAAGAGCAAGATCCAGA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAATATGCTTCAAAACCTaGCTATCTTCACTCCAACCT +
Preference number: 5 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRICFKT*LSSLQP
Trigger: AGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATAT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGCAAAGCAGTCAACATaGATTAGGCACGGAACCTCC +
Preference number: 5 (lower is better)
Translates to: TLHLHYNFALLGILTVSDAKQST*IRHGTS
Trigger: GGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTGC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGA +
Preference number: 5 (lower is better)
Translates to: CRHSSMLFFITASQPWTHRDFGV*ITLAYR
Trigger: TCTGTATGCCAAAGTGATCAACACACCAAAGTCTCT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCTTCATGGGGCCTGTCTaGAACTCTGATTGCATCATT +
Preference number: 5 (lower is better)
Translates to: LIASLTRSRETVKWGPGSFMGPV*NSDCII
Trigger: AATGATGCAATCAGAGTTCAAGACAGGCCCCATGAA...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGTACAACTTTGCTCTTTaGGGCATCTTAACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMYNFAL*GILTVS
Trigger: TGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTA...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATACAACTTTGCTCTTTaGGGCATCTTAACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRYNFAL*GILTVS
Trigger: TGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGTAACATTTCCATGTTaGGTGTTGTTTCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGVTFPC*VLFQLC
Trigger: GCAGAGCTGAAACAACACCAAACATGGAAATGTTAC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS TCA 90 bp AGGCTGAGGACCGGTTTTTCAGATCATTGGGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCATACGTACATAACACCTCCCATGGTG +
Preference number: 5 (lower is better)
Translates to: RLRTGFSDHWVSEAI*CALSQHTYITPPMV
Trigger: CACCATGGGAGGTGTTATGTACGTATGCTGAGATAATGCACATCAAATTGCCTCTGAAACCCAATGATCTGAAAAACCGGTCCTCAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS GCA 90 bp GAGGACCGGTTTTTCAGATCATTGGGTTTCAGAGGCAATTTGATGTaGATTATCTCAGCATACGTACATAACACCTCCCATGGTGCGTGT +
Preference number: 5 (lower is better)
Translates to: EDRFFRSLGFRGNLM*IISAYVHNTSHGAC
Trigger: ACACGCACCATGGGAGGTGTTATGTACGTATGCTGAGATAATGCACATCAAATTGCCTCTGAAACCCAATGATCTGAAAAACCGGTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SQLGCNHMPIVDVVFILLPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...CAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CAA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000681156.1
CDS-3UTR CAA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCGGTTTTTCAGATCATaGGGTTTCAGAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIRFFRS*GFRGNL
Trigger: CAAATTGCCTCTGAAACCCAATGATCTGAAAAACCG...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGGTTTTTCAGATCATaGGGTTTCAGAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: AATIVCRHSSMLFFITASRFFRS*GFRGNL
Trigger: CAAATTGCCTCTGAAACCCAATGATCTGAAAAACCG...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCTCTACACTGAGGACTTaGGTAAACCAGTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: LIASLTRSRETVKWGPGSSTLRT*VNQLSV
Trigger: TACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGA...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTCTACACTGAGGACTTaGGTAAACCAGTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVSTLRT*VNQLSV
Trigger: TACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATAAGCTTGTTGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACTCTACACTGAGGACTTaGGTAAACCAGTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: HKLVGIEAEELSNEKLHDSTLRT*VNQLSV
Trigger: TACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGA...GTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CAA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGGCAGTGAAAAACTCTaGCTCTGGCTTGATGATGCT +
Preference number: 5 (lower is better)
Translates to: TLHLHYNFALLGILTVSDGSEKL*LWLDDA
Trigger: AGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGGCAGTGAAAAACTCTaGCTCTGGCTTGATGATGCT +
Preference number: 5 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYGSEKL*LWLDDA
Trigger: AGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGCAGTGAAAAACTCTaGCTCTGGCTTGATGATGCT +
Preference number: 5 (lower is better)
Translates to: SQLGCNHMPIVDVVFILLGSEKL*LWLDDA
Trigger: AGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCC...CAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACTGTTGATCCCAAACTaGCTAACATTGTTTATCACT +
Preference number: 5 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRLLIPN*LTLFIT
Trigger: AGTGATAAACAATGTTAGCAAGTTTGGGATCAACAG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCTGTTGATCCCAAACTaGCTAACATTGTTTATCACT +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMLLIPN*LTLFIT
Trigger: AGTGATAAACAATGTTAGCAAGTTTGGGATCAACAG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTGTTGATCCCAAACTaGCTAACATTGTTTATCACT +
Preference number: 5 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLLIPN*LTLFIT
Trigger: AGTGATAAACAATGTTAGCAAGTTTGGGATCAACAG...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTTATTGTCAGCTGAGTaGTCAGTTCAAGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVLLSAE*SVQEDS
Trigger: GCTGTCTTCTTGAACTGACAACTCAGCTGACAATAA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTCTTATTTCCAATATATaGTTCACGAGAGCCAACAGA +
Preference number: 5 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGLISNI*FTRANR
Trigger: TCTGTTGGCTCTCGTGAACAATATATTGGAAATAAG...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTTATTTCCAATATATaGTTCACGAGAGCCAACAGA +
Preference number: 5 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLISNI*FTRANR
Trigger: TCTGTTGGCTCTCGTGAACAATATATTGGAAATAAG...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGPCSNV*GFLWYQ
Trigger: CTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGCTATGATCATGGCATaGGTCACCACAGCCAGAATT +
Preference number: 5 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTAMIMA*VTTARI
Trigger: AATTCTGGCTGTGGTGACCAATGCCATGATCATAGC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTATGGAGAGAGTGTTGTaGATGTACCCTTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTMERVL*MYPSMV
Trigger: CACCATGGAAGGGTACATCAACAACACTCTCTCCAT...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAAGATGGAGAGAGTGTaGTTGATGTACCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSKMERV*LMYPSM
Trigger: CATGGAAGGGTACATCAACAACACTCTCTCCATCTT...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACATGCAAGATGGAGAGAGTGTaGTTGATGTACCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: PMRSSMTMIKASLAAITCKMERV*LMYPSM
Trigger: CATGGAAGGGTACATCAACAACACTCTCTCCATCTT...GCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CAA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCCCTTGCTTTTGTTTTaGAAGTCTGCGACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: AATIVCRHSSMLFFITASPLLLF*KSATLK
Trigger: CTTCAAAGTCGCAGACTTCAAAAACAAAAGCAAGGG...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTGCTCTTTGTGCGTTTaGATACATCGGGAATTGCAT +
Preference number: 5 (lower is better)
Translates to: AATIVCRHSSMLFFITASCSLCV*IHRELH
Trigger: ATGCAATTCCCGATGTATCAAAACGCACAAAGAGCA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTTTTCTCTCTGGATCTaGCTCTTTGTGCGTTTTGAT +
Preference number: 5 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYFSLWI*LFVRFD
Trigger: ATCAAAACGCACAAAGAGCAAGATCCAGAGAGAAAA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGATTTTGGCCGTAAATaGTTATCTACTGCTTCTATC +
Preference number: 5 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRDFGRK*LSTASI
Trigger: GATAGAAGCAGTAGATAACAATTTACGGCCAAAATC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGATTTTGGCCGTAAATaGTTATCTACTGCTTCTATC +
Preference number: 5 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKDFGRK*LSTASI
Trigger: GATAGAAGCAGTAGATAACAATTTACGGCCAAAATC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGATATGCTTCAAAACCTaGCTATCTTCACTCCAACCT +
Preference number: 5 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGICFKT*LSSLQP
Trigger: AGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATAT...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTCTGAGTCTCTTTACTaGATTATGAATAAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGSESLY*IMNKLG
Trigger: ACCCAGCTTATTCATAATCAAGTAAAGAGACTCAGA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGTCTGAGTCTCTTTACTaGATTATGAATAAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMSESLY*IMNKLG
Trigger: ACCCAGCTTATTCATAATCAAGTAAAGAGACTCAGA...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTCTGAGTCTCTTTACTaGATTATGAATAAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSSESLY*IMNKLG
Trigger: ACCCAGCTTATTCATAATCAAGTAAAGAGACTCAGA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCCACTAGTTGCCCTTTaGGAAAGCTCATCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTPLVAL*ESSSCK
Trigger: TTTGCAGGATGAGCTTTCCAAAAGGGCAACTAGTGG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS TCA 90 bp GTCTACACTGAGGACTTTGGTAAACCAGTTGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATCATTGGGTTTCAGAGGCAATTTGAT +
Preference number: 5 (lower is better)
Translates to: VYTEDFGKPVECTKG*GPVFQIIGFQRQFD
Trigger: ATCAAATTGCCTCTGAAACCCAATGATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS GCA 90 bp AGAGTAGATGACGTGCTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: RVDDVLHDNDKSQLG*NHMPIVDVVFILLG
Trigger: CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCACGTCATCTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS CCA 90 bp AATTATAAAGCTGATGATGGAGGCCGTGATGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGATTGGGTCTGTTCCATTAATGTTCTT +
Preference number: 5 (lower is better)
Translates to: NYKADDGGRDGRGCL*SQVFLDWVCSINVL
Trigger: AAGAACATTAATGGAACAGACCCAATCCAGAAATACCTGACTCCACAGACAGCCACGTCCATCACGGCCTCCATCATCAGCTTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
CDS-3UTR CAA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATCCAATACTGATCTTGTaGCTTCTAACTGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYPILIL*LLTAGH
Trigger: ATGGCCTGCAGTTAGAAGCAACAAGATCAGTATTGG...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCATCCAATACTGATCTaGTTGCTTCTAACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCHPILI*LLLTAG
Trigger: GCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCATCCAATACTGATCTaGTTGCTTCTAACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: TLHLHYNFALLGILTVSDHPILI*LLLTAG
Trigger: GCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCATCCAATACTGATCTaGTTGCTTCTAACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTHPILI*LLLTAG
Trigger: GCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTACTTTGGTAAACCAGTaGAGTGTACCAAAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTTLVNQ*SVPKAE
Trigger: CTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGT...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: TLHLHYNFALLGILTVSDNSCSG*MMLSST
Trigger: TGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCGCAAGTAATATaGAGTTTCCAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVDSQVI*SFQNGQ
Trigger: TTGTCCATTCTGGAAACTCAATATTACTTGCGAGTC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCTTATTTCCAATATATaGTTCACGAGAGCCAACAGA +
Preference number: 5 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLISNI*FTRANR
Trigger: TCTGTTGGCTCTCGTGAACAATATATTGGAAATAAG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACAGAATTGCTATTCCTaGCATGATGGGCTGCCATGC +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGQNCYS*HDGLPC
Trigger: GCATGGCAGCCCATCATGCAAGGAATAGCAATTCTG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGCTATGATCATGGCATaGGTCACCACAGCCAGAATT +
Preference number: 5 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGAMIMA*VTTARI
Trigger: AATTCTGGCTGTGGTGACCAATGCCATGATCATAGC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATAAGATGGAGAGAGTGTaGTTGATGTACCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: TLHLHYNFALLGILTVSDKMERV*LMYPSM
Trigger: CATGGAAGGGTACATCAACAACACTCTCTCCATCTT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTTCCATGGTGTAGAGTACGGGTTTCCCTaGCTTTTGTTTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: VCDFEDGESVVDVPFHGVEYGFP*LLFLKS
Trigger: AGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTC...TACACCATGGAAGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CAA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTTTTCTCTCTGGATCTaGCTCTTTGTGCGTTTTGAT +
Preference number: 5 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVFSLWI*LFVRFD
Trigger: ATCAAAACGCACAAAGAGCAAGATCCAGAGAGAAAA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGATTTTGGCCGTAAATaGTTATCTACTGCTTCTATC +
Preference number: 5 (lower is better)
Translates to: CRHSSMLFFITASQPWTHDFGRK*LSTASI
Trigger: GATAGAAGCAGTAGATAACAATTTACGGCCAAAATC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGCAAAGCAGTCAACATaGATTAGGCACGGAACCTCC +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGAKQST*IRHGTS
Trigger: GGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTGC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTCTGAGTCTCTTTACTaGATTATGAATAAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGSESLY*IMNKLG
Trigger: ACCCAGCTTATTCATAATCAAGTAAAGAGACTCAGA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTAGTGGCACTCCCGTCTaGGCTGCGAATGAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSSGTPV*AANEKE
Trigger: CTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTACAACTTTGCTCTTTaGGGCATCTTAACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVYNFAL*GILTVS
Trigger: TGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS TCA 90 bp TGTATGTTATTCCAGATTGCTTTTCCTCCCATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGACAGCCACCTGGGTCACACTCTTCA +
Preference number: 5 (lower is better)
Translates to: CMLFQIAFPPMIIVS*VVSSRRQPPGSHSS
Trigger: TGAAGAGTGTGACCCAGGTGGCTGTCTTCTTGAACTGACAACTCAGCTGACAATAATCATGGGAGGAAAAGCAATCTGGAATAACATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS GCA 90 bp CAACAAAGCGAGATACTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: QQSEILHDNDKSQLG*NHMPIVDVVFILLG
Trigger: CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGTATCTCGCTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
CDS-3UTR CAA 90 bp AGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGCGGTTTTTCAGATCATaGGGTTTCAGAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: SQLGCNHMPIVDVVFILLRFFRS*GFRGNL
Trigger: CAAATTGCCTCTGAAACCCAATGATCTGAAAAACCG...CAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGGCAGTGAAAAACTCTaGCTCTGGCTTGATGATGCT +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGGSEKL*LWLDDA
Trigger: AGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGCTGTTGATCCCAAACTaGCTAACATTGTTTATCACT +
Preference number: 5 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQLLIPN*LTLFIT
Trigger: AGTGATAAACAATGTTAGCAAGTTTGGGATCAACAG...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CAA 90 bp GTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTTCCATGGTGTAGACTCGCAAGTAATATaGAGTTTCCAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: VCDFEDGESVVDVPFHGVDSQVI*SFQNGQ
Trigger: TTGTCCATTCTGGAAACTCAATATTACTTGCGAGTC...TACACCATGGAAGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CAA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGACTCGCAAGTAATATaGAGTTTCCAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSDSQVI*SFQNGQ
Trigger: TTGTCCATTCTGGAAACTCAATATTACTTGCGAGTC...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTTATTGTCAGCTGAGTaGTCAGTTCAAGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCLLSAE*SVQEDS
Trigger: GCTGTCTTCTTGAACTGACAACTCAGCTGACAATAA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGTTATTGTCAGCTGAGTaGTCAGTTCAAGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: SQLGCNHMPIVDVVFILLLLSAE*SVQEDS
Trigger: GCTGTCTTCTTGAACTGACAACTCAGCTGACAATAA...CAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWPCSNV*GFLWYQ
Trigger: CTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGCTATGATCATGGCATaGGTCACCACAGCCAGAATT +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGAMIMA*VTTARI
Trigger: AATTCTGGCTGTGGTGACCAATGCCATGATCATAGC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAATGGAGAGAGTGTTGTaGATGTACCCTTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGMERVL*MYPSMV
Trigger: CACCATGGAAGGGTACATCAACAACACTCTCTCCAT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGGAGTACGGGTTTCCCTaGCTTTTGTTTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: IEAEELSNEKLHDNDKSQEYGFP*LLFLKS
Trigger: AGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTC...CTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CAA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGATTTTGGCCGTAAATaGTTATCTACTGCTTCTATC +
Preference number: 5 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVDFGRK*LSTASI
Trigger: GATAGAAGCAGTAGATAACAATTTACGGCCAAAATC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCAC +
Preference number: 5 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLIPADS*TKGTPH
Trigger: GTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAAT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGA +
Preference number: 5 (lower is better)
Translates to: TLHLHYNFALLGILTVSDRDFGV*ITLAYR
Trigger: TCTGTATGCCAAAGTGATCAACACACCAAAGTCTCT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GGAGGGATTTTTAACATTCTAAATGCTATCTGGAACATCGATGCAGCATGGGAAGTATTCATAAGCTTGTaGGCATCGAGGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GGIFNILNAIWNIDAAWEVFISL*ASRLKS
Trigger: GCTCTTCAGCCTCGATGCCAACAAGCTTATGAATAC...TTCCCATGCTGCATCGATGTTCCAGATAGCATTTAGAATGTTAAAAATCCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS TCA 90 bp TCCTGTTCCCATCGTGGGGTTATCTTTTCTGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTCATGATCCAGGGCAATAATACTTCT +
Preference number: 5 (lower is better)
Translates to: SCSHRGVIFSDPETL*NRPIRFMIQGNNTS
Trigger: AGAAGTATTATTGCCCTGGATCATGAATCTAATTGGGCGATTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCACGATGGGAACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACCAATACTGATCTTGTaGCTTCTAACTGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGPILIL*LLTAGH
Trigger: ATGGCCTGCAGTTAGAAGCAACAAGATCAGTATTGG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACATCCAATACTGATCTaGTTGCTTCTAACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGHPILI*LLLTAG
Trigger: GCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGCGGTTTTTCAGATCATaGGGTTTCAGAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGRFFRS*GFRGNL
Trigger: CAAATTGCCTCTGAAACCCAATGATCTGAAAAACCG...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGCGGTTTTTCAGATCATaGGGTTTCAGAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWRFFRS*GFRGNL
Trigger: CAAATTGCCTCTGAAACCCAATGATCTGAAAAACCG...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAACTTTGGTAAACCAGTaGAGTGTACCAAAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGTLVNQ*SVPKAE
Trigger: CTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGTCTACACTGAGGACTTaGGTAAACCAGTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWSTLRT*VNQLSV
Trigger: TACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGA...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGNSCSG*MMLSST
Trigger: TGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACTTCTGGTGGCTGGATaGAAGAAAGCATCTCTATCA +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLLVAG*KKASLS
Trigger: TGATAGAGATGCTTTCTTCAATCCAGCCACCAGAAG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACTGTTGATCCCAAACTaGCTAACATTGTTTATCACT +
Preference number: 5 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSLLIPN*LTLFIT
Trigger: AGTGATAAACAATGTTAGCAAGTTTGGGATCAACAG...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGAGTTTACAAGTCTGTaGATCCCAAACTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCEFTSL*IPNLLT
Trigger: TGTTAGCAAGTTTGGGATCAACAGACTTGTAAACTC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGAGTTTACAAGTCTGTaGATCCCAAACTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: TLHLHYNFALLGILTVSDEFTSL*IPNLLT
Trigger: TGTTAGCAAGTTTGGGATCAACAGACTTGTAAACTC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACGAGTTTACAAGTCTGTaGATCCCAAACTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: LSNEKLHDNDKSQLGCNHEFTSL*IPNLLT
Trigger: TGTTAGCAAGTTTGGGATCAACAGACTTGTAAACTC...GTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CAA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGAGTTTACAAGTCTGTaGATCCCAAACTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTEFTSL*IPNLLT
Trigger: TGTTAGCAAGTTTGGGATCAACAGACTTGTAAACTC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGACTCGCAAGTAATATaGAGTTTCCAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYDSQVI*SFQNGQ
Trigger: TTGTCCATTCTGGAAACTCAATATTACTTGCGAGTC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGGACTCGCAAGTAATATaGAGTTTCCAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: IEAEELSNEKLHDNDKSQDSQVI*SFQNGQ
Trigger: TTGTCCATTCTGGAAACTCAATATTACTTGCGAGTC...CTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CAA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTCCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFPCSNV*GFLWYQ
Trigger: CTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGG...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCAGAATTGCTATTCCTaGCATGATGGGCTGCCATGC +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWQNCYS*HDGLPC
Trigger: GCATGGCAGCCCATCATGCAAGGAATAGCAATTCTG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAAGATGGAGAGAGTGTaGTTGATGTACCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGKMERV*LMYPSM
Trigger: CATGGAAGGGTACATCAACAACACTCTCTCCATCTT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGGAGTACGGGTTTCCCTaGCTTTTGTTTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWEYGFP*LLFLKS
Trigger: AGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTC...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GGAGGGATTTTTAACATTCTAAATGCTATCTGGAACATCGATGCAGCATGGGAAATGATAAAAGCCAGCTaGGCTGCAATCACATGCCAA +
Preference number: 5 (lower is better)
Translates to: GGIFNILNAIWNIDAAWEMIKAS*AAITCQ
Trigger: TTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCAT...TTCCCATGCTGCATCGATGTTCCAGATAGCATTTAGAATGTTAAAAATCCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAATGATAAAAGCCAGCTaGGCTGCAATCACATGCCAA +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGMIKAS*AAITCQ
Trigger: TTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCAT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGTGCTCTTTGTGCGTTTaGATACATCGGGAATTGCAT +
Preference number: 5 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWCSLCV*IHRELH
Trigger: ATGCAATTCCCGATGTATCAAAACGCACAAAGAGCA...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATCTGGATCTTGCTCTTaGTGCGTTTTGATACATCGG +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGSGSCS*CVLIHR
Trigger: CCGATGTATCAAAACGCACAAAGAGCAAGATCCAGA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATATATGCTTCAAAACCTaGCTATCTTCACTCCAACCT +
Preference number: 5 (lower is better)
Translates to: TLHLHYNFALLGILTVSDICFKT*LSSLQP
Trigger: AGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATAT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTACAACTTTGCTCTTTaGGGCATCTTAACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCYNFAL*GILTVS
Trigger: TGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS TCA 90 bp AGCTTGTCATCCAATACTGATCTTGTTGCTTCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCGTATGCTTGTCTTTTCCTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SLSSNTDLVASNCRP*QIRLDSYACLFLLC
Trigger: ACAAAGGAGGAAAAGACAAGCATACGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATGACAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS GCA 90 bp GGAATGAGAAGTTGCTTTCTATGGATCCCATACTCCCATAAATACTaGAAAGACCAGGGTTCCAAAACTGTCGAAGATGCACAATTTCTT +
Preference number: 5 (lower is better)
Translates to: GMRSCFLWIPYSHKY*KDQGSKTVEDAQFL
Trigger: AAGAAATTGTGCATCTTCGACAGTTTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTATGGGATCCATAGAAAGCAACTTCTCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426898.2
CDS GCA 90 bp CTGAACTGCTGTAGTCTCATGATCAAACTTGAAGGAATGAGAAGTTaGTTTCTATGGATCCCATACTCCCATAAATACTGCAAAGACCAG +
Preference number: 5 (lower is better)
Translates to: LNCCSLMIKLEGMRS*FLWIPYSHKYCKDQ
Trigger: CTGGTCTTTGCAGTATTTATGGGAGTATGGGATCCATAGAAAGCAACTTCTCATTCCTTCAAGTTTGATCATGAGACTACAGCAGTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426898.2
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
CDS-3UTR CAA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACATCCAATACTGATCTaGTTGCTTCTAACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFIHPILI*LLLTAG
Trigger: GCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATG...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACGGTTTTTCAGATCATaGGGTTTCAGAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGRFFRS*GFRGNL
Trigger: CAAATTGCCTCTGAAACCCAATGATCTGAAAAACCG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp AGAAGTCACACAGCCATGCATGAACAGCATTTGGAAGAAAGTTTTGAAGACATAACTTTGGTAAACCAGTaGAGTGTACCAAAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: RSHTAMHEQHLEESFEDITLVNQ*SVPKAE
Trigger: CTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGT...TATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATCTACACTGAGGACTTaGGTAAACCAGTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGSTLRT*VNQLSV
Trigger: TACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATAAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFINSCSG*MMLSST
Trigger: TGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTT...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CAA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTGGCAGTGAAAAACTCTaGCTCTGGCTTGATGATGCT +
Preference number: 5 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSGSEKL*LWLDDA
Trigger: AGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCC...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGGCAGTGAAAAACTCTaGCTCTGGCTTGATGATGCT +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWGSEKL*LWLDDA
Trigger: AGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGGCAGTGAAAAACTCTaGCTCTGGCTTGATGATGCT +
Preference number: 5 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLGSEKL*LWLDDA
Trigger: AGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCTGTTGATCCCAAACTaGCTAACATTGTTTATCACT +
Preference number: 5 (lower is better)
Translates to: TLHLHYNFALLGILTVSDLLIPN*LTLFIT
Trigger: AGTGATAAACAATGTTAGCAAGTTTGGGATCAACAG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGGAGTTTACAAGTCTGTaGATCCCAAACTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWEFTSL*IPNLLT
Trigger: TGTTAGCAAGTTTGGGATCAACAGACTTGTAAACTC...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGGACTCGCAAGTAATATaGAGTTTCCAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWDSQVI*SFQNGQ
Trigger: TTGTCCATTCTGGAAACTCAATATTACTTGCGAGTC...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTATTGTCAGCTGAGTaGTCAGTTCAAGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLLSAE*SVQEDS
Trigger: GCTGTCTTCTTGAACTGACAACTCAGCTGACAATAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCTTATTTCCAATATATaGTTCACGAGAGCCAACAGA +
Preference number: 5 (lower is better)
Translates to: TLHLHYNFALLGILTVSDLISNI*FTRANR
Trigger: TCTGTTGGCTCTCGTGAACAATATATTGGAAATAAG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCTTATTTCCAATATATaGTTCACGAGAGCCAACAGA +
Preference number: 5 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCLISNI*FTRANR
Trigger: TCTGTTGGCTCTCGTGAACAATATATTGGAAATAAG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTGCTATGATCATGGCATaGGTCACCACAGCCAGAATT +
Preference number: 5 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSAMIMA*VTTARI
Trigger: AATTCTGGCTGTGGTGACCAATGCCATGATCATAGC...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGCTATGATCATGGCATaGGTCACCACAGCCAGAATT +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWAMIMA*VTTARI
Trigger: AATTCTGGCTGTGGTGACCAATGCCATGATCATAGC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGATGGAGAGAGTGTTGTaGATGTACCCTTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWMERVL*MYPSMV
Trigger: CACCATGGAAGGGTACATCAACAACACTCTCTCCAT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGATGGAGAGAGTGTTGTaGATGTACCCTTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLMERVL*MYPSMV
Trigger: CACCATGGAAGGGTACATCAACAACACTCTCTCCAT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACCCTTGCTTTTGTTTTaGAAGTCTGCGACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGPLLLF*KSATLK
Trigger: CTTCAAAGTCGCAGACTTCAAAAACAAAAGCAAGGG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGAGTACGGGTTTCCCTaGCTTTTGTTTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGEYGFP*LLFLKS
Trigger: AGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATGCTCTTTGTGCGTTTaGATACATCGGGAATTGCAT +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGCSLCV*IHRELH
Trigger: ATGCAATTCCCGATGTATCAAAACGCACAAAGAGCA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTTTTCTCTCTGGATCTaGCTCTTTGTGCGTTTTGAT +
Preference number: 5 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGFSLWI*LFVRFD
Trigger: ATCAAAACGCACAAAGAGCAAGATCCAGAGAGAAAA...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTCTGAGTCTCTTTACTaGATTATGAATAAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: TLHLHYNFALLGILTVSDSESLY*IMNKLG
Trigger: ACCCAGCTTATTCATAATCAAGTAAAGAGACTCAGA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS GCA 90 bp GTATTTCTGGATTGGGTCTGTTCCATTAATGTTCTTGGGAAGTTTTaGAGAAAATACAATGAACACCGAGAGCCTATAGACAATGATCCC +
Preference number: 5 (lower is better)
Translates to: VFLDWVCSINVLGKF*RKYNEHREPIDNDP
Trigger: GGGATCATTGTCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAAAACTTCCCAAGAACATTAATGGAACAGACCCAATCCAGAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CCA 90 bp TGTAGTCTCATGATCAAACTTGAAGGAATGAGAAGTTGCTTTCTATaGATCCCATACTCCCATAAATACTGCAAAGACCAGGGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: CSLMIKLEGMRSCFL*IPYSHKYCKDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTATGGGATCCATAGAAAGCAACTTCTCATTCCTTCAAGTTTGATCATGAGACTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426898.2
CDS-3UTR CAA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000681156.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCCAATACTGATCTTGTaGCTTCTAACTGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWPILIL*LLTAGH
Trigger: ATGGCCTGCAGTTAGAAGCAACAAGATCAGTATTGG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp TACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTGACTGAATCTGGCCAACCAATACTGATCTTGTaGCTTCTAACTGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: YYLYQMFAQAVEVTESGQPILIL*LLTAGH
Trigger: ATGGCCTGCAGTTAGAAGCAACAAGATCAGTATTGG...TTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CAA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTCATCCAATACTGATCTaGTTGCTTCTAACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSHPILI*LLLTAG
Trigger: GCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATG...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCATCCAATACTGATCTaGTTGCTTCTAACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWHPILI*LLLTAG
Trigger: GCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGACTTTGGTAAACCAGTaGAGTGTACCAAAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWTLVNQ*SVPKAE
Trigger: CTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATATCTACACTGAGGACTTaGGTAAACCAGTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFISTLRT*VNQLSV
Trigger: TACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGA...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWNSCSG*MMLSST
Trigger: TGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp TACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTGACTGAATCTGGCCAAAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: YYLYQMFAQAVEVTESGQNSCSG*MMLSST
Trigger: TGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTT...TTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCTTCTGGTGGCTGGATaGAAGAAAGCATCTCTATCA +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWLLVAG*KKASLS
Trigger: TGATAGAGATGCTTTCTTCAATCCAGCCACCAGAAG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp TACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTGACTGAATCTGGCCAACTTCTGGTGGCTGGATaGAAGAAAGCATCTCTATCA +
Preference number: 5 (lower is better)
Translates to: YYLYQMFAQAVEVTESGQLLVAG*KKASLS
Trigger: TGATAGAGATGCTTTCTTCAATCCAGCCACCAGAAG...TTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGAGTTTACAAGTCTGTaGATCCCAAACTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGEFTSL*IPNLLT
Trigger: TGTTAGCAAGTTTGGGATCAACAGACTTGTAAACTC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGACTCGCAAGTAATATaGAGTTTCCAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGDSQVI*SFQNGQ
Trigger: TTGTCCATTCTGGAAACTCAATATTACTTGCGAGTC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGCTTATTTCCAATATATaGTTCACGAGAGCCAACAGA +
Preference number: 5 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWLISNI*FTRANR
Trigger: TCTGTTGGCTCTCGTGAACAATATATTGGAAATAAG...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTGCTATGATCATGGCATaGGTCACCACAGCCAGAATT +
Preference number: 5 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFAMIMA*VTTARI
Trigger: AATTCTGGCTGTGGTGACCAATGCCATGATCATAGC...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAAGATGGAGAGAGTGTaGTTGATGTACCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWKMERV*LMYPSM
Trigger: CATGGAAGGGTACATCAACAACACTCTCTCCATCTT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGAAGATGGAGAGAGTGTaGTTGATGTACCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLKMERV*LMYPSM
Trigger: CATGGAAGGGTACATCAACAACACTCTCTCCATCTT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGATGATAAAAGCCAGCTaGGCTGCAATCACATGCCAA +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWMIKAS*AAITCQ
Trigger: TTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCAT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGATGATAAAAGCCAGCTaGGCTGCAATCACATGCCAA +
Preference number: 5 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLMIKAS*AAITCQ
Trigger: TTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCAT...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGATTTTCTCTCTGGATCTaGCTCTTTGTGCGTTTTGAT +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGFSLWI*LFVRFD
Trigger: ATCAAAACGCACAAAGAGCAAGATCCAGAGAGAAAA...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGGATTTTGGCCGTAAATaGTTATCTACTGCTTCTATC +
Preference number: 5 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWDFGRK*LSTASI
Trigger: GATAGAAGCAGTAGATAACAATTTACGGCCAAAATC...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTGGGATTCTGATAGGTaGGCTCCTCTGGTGTTTAAC +
Preference number: 5 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFWDSDR*APLVFN
Trigger: GTTAAACACCAGAGGAGCCAACCTATCAGAATCCCA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTGGGATTCTGATAGGTaGGCTCCTCTGGTGTTTAAC +
Preference number: 5 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFWDSDR*APLVFN
Trigger: GTTAAACACCAGAGGAGCCAACCTATCAGAATCCCA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTCCAATACTGATCTTGTaGCTTCTAACTGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFPILIL*LLTAGH
Trigger: ATGGCCTGCAGTTAGAAGCAACAAGATCAGTATTGG...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTCATCCAATACTGATCTaGTTGCTTCTAACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFHPILI*LLLTAG
Trigger: GCCTGCAGTTAGAAGCAACAAGATCAGTATTGGATG...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCGGTTTTTCAGATCATaGGGTTTCAGAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRFFRS*GFRGNL
Trigger: CAAATTGCCTCTGAAACCCAATGATCTGAAAAACCG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTCTACACTGAGGACTTaGGTAAACCAGTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWSTLRT*VNQLSV
Trigger: TACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACA +
Preference number: 5 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFNSCSG*MMLSST
Trigger: TGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTT...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTCTTCTGGTGGCTGGATaGAAGAAAGCATCTCTATCA +
Preference number: 5 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFLLVAG*KKASLS
Trigger: TGATAGAGATGCTTTCTTCAATCCAGCCACCAGAAG...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACTGTTGATCCCAAACTaGCTAACATTGTTTATCACT +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLLIPN*LTLFIT
Trigger: AGTGATAAACAATGTTAGCAAGTTTGGGATCAACAG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGTTATTGTCAGCTGAGTaGTCAGTTCAAGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWLLSAE*SVQEDS
Trigger: GCTGTCTTCTTGAACTGACAACTCAGCTGACAATAA...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACTTATTTCCAATATATaGTTCACGAGAGCCAACAGA +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLISNI*FTRANR
Trigger: TCTGTTGGCTCTCGTGAACAATATATTGGAAATAAG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCCCTTGCTTTTGTTTTaGAAGTCTGCGACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWPLLLF*KSATLK
Trigger: CTTCAAAGTCGCAGACTTCAAAAACAAAAGCAAGGG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGCCCTTGCTTTTGTTTTaGAAGTCTGCGACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLPLLLF*KSATLK
Trigger: CTTCAAAGTCGCAGACTTCAAAAACAAAAGCAAGGG...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGAGTACGGGTTTCCCTaGCTTTTGTTTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWEYGFP*LLFLKS
Trigger: AGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGAGTACGGGTTTCCCTaGCTTTTGTTTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLEYGFP*LLFLKS
Trigger: AGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGTGCTCTTTGTGCGTTTaGATACATCGGGAATTGCAT +
Preference number: 5 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLCSLCV*IHRELH
Trigger: ATGCAATTCCCGATGTATCAAAACGCACAAAGAGCA...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGATTTTGGCCGTAAATaGTTATCTACTGCTTCTATC +
Preference number: 5 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGDFGRK*LSTASI
Trigger: GATAGAAGCAGTAGATAACAATTTACGGCCAAAATC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGAGTTTACAAGTCTGTaGATCCCAAACTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWEFTSL*IPNLLT
Trigger: TGTTAGCAAGTTTGGGATCAACAGACTTGTAAACTC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGACTCGCAAGTAATATaGAGTTTCCAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWDSQVI*SFQNGQ
Trigger: TTGTCCATTCTGGAAACTCAATATTACTTGCGAGTC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGACTCGCAAGTAATATaGAGTTTCCAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLDSQVI*SFQNGQ
Trigger: TTGTCCATTCTGGAAACTCAATATTACTTGCGAGTC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTTATTGTCAGCTGAGTaGTCAGTTCAAGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFLLSAE*SVQEDS
Trigger: GCTGTCTTCTTGAACTGACAACTCAGCTGACAATAA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTGCTCTTTGTGCGTTTaGATACATCGGGAATTGCAT +
Preference number: 5 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFCSLCV*IHRELH
Trigger: ATGCAATTCCCGATGTATCAAAACGCACAAAGAGCA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTGTAACATTTCCATGTTaGGTGTTGTTTCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFVTFPC*VLFQLC
Trigger: GCAGAGCTGAAACAACACCAAACATGGAAATGTTAC...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCTGTTGATCCCAAACTaGCTAACATTGTTTATCACT +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWLLIPN*LTLFIT
Trigger: AGTGATAAACAATGTTAGCAAGTTTGGGATCAACAG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTCTGTTGATCCCAAACTaGCTAACATTGTTTATCACT +
Preference number: 5 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSLLIPN*LTLFIT
Trigger: AGTGATAAACAATGTTAGCAAGTTTGGGATCAACAG...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CAA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTGAGTTTACAAGTCTGTaGATCCCAAACTTGCTAACA +
Preference number: 5 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFEFTSL*IPNLLT
Trigger: TGTTAGCAAGTTTGGGATCAACAGACTTGTAAACTC...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTGACTCGCAAGTAATATaGAGTTTCCAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFDSQVI*SFQNGQ
Trigger: TTGTCCATTCTGGAAACTCAATATTACTTGCGAGTC...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGCTTATTTCCAATATATaGTTCACGAGAGCCAACAGA +
Preference number: 5 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWLISNI*FTRANR
Trigger: TCTGTTGGCTCTCGTGAACAATATATTGGAAATAAG...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CAA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTTACAACTTTGCTCTTTaGGGCATCTTAACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFYNFAL*GILTVS
Trigger: TGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTA...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTTACAACTTTGCTCTTTaGGGCATCTTAACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFYNFAL*GILTVS
Trigger: TGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTA...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTCTGTTGATCCCAAACTaGCTAACATTGTTTATCACT +
Preference number: 5 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFLLIPN*LTLFIT
Trigger: AGTGATAAACAATGTTAGCAAGTTTGGGATCAACAG...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CAA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTCTTATTTCCAATATATaGTTCACGAGAGCCAACAGA +
Preference number: 5 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFLISNI*FTRANR
Trigger: TCTGTTGGCTCTCGTGAACAATATATTGGAAATAAG...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CCA 72 bp CTCCCTCAGAAGGCGGCTCCGAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGAACGGCGCGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LPQKAAPNLARS*GLPGSRTARLS
Trigger: GGAGAGCCGCGCCGTTCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTTCTGAGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000550630.5
ENST00000680201.1
ENST00000680498.1
ENST00000681156.1
CDS CAA 72 bp TCTCCCTCAGAAGGCGGCTCCGAACTTGGCGCGAAGTaGGGGGCTCCCGGGTTCCAGAACGGCGCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: SPSEGGSELGAK*GAPGFQNGAAL
Trigger: GAGAGCCGCGCCGTTCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTTCTGAGGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000550630.5
ENST00000680201.1
ENST00000680498.1
ENST00000681156.1
CDS CAA 90 bp TCCTGCTCATCTTTTTCATGTCTCCCTCAGAAGGCGGCTCCGAACTaGGCGCGAAGTTGGGGGCTCCCGGGTTCCAGAACGGCGCGGCTC +
Preference number: 6 (lower is better)
Translates to: SCSSFSCLPQKAAPN*ARSWGLPGSRTARL
Trigger: GAGCCGCGCCGTTCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTTCTGAGGGAGACATGAAAAAGATGAGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000550630.5
ENST00000680201.1
ENST00000680498.1
ENST00000681156.1
CDS CCA 72 bp CTTTTTCATGTCTCCCTCAGAAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCCCGGGTTCCAGAACGG +
Preference number: 6 (lower is better)
Translates to: LFHVSLRRRLRT*REVGGSRVPER
Trigger: CCGTTCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTTCTGAGGGAGACATGAAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000550630.5
ENST00000680201.1
ENST00000680498.1
ENST00000681156.1
CDS CAA 72 bp TCTTTTTCATGTCTCCCTCAGAAGGCGGCTCCGAACTaGGCGCGAAGTTGGGGGCTCCCGGGTTCCAGAACG +
Preference number: 6 (lower is better)
Translates to: SFSCLPQKAAPN*ARSWGLPGSRT
Trigger: CGTTCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCTTCTGAGGGAGACATGAAAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000550630.5
ENST00000680201.1
ENST00000680498.1
ENST00000681156.1
CDS GCA 72 bp TCCAATGTCACCCAAGTATTCCAAGTGGCACGAAGCTaGCCGAGAACAGTGGTCAGCCGAGGGCTGAAAAGG +
Preference number: 6 (lower is better)
Translates to: SNVTQVFQVARS*PRTVVSRGLKR
Trigger: CCTTTTCAGCCCTCGGCTGACCACTGTTCTCGGGCAGCTTCGTGCCACTTGGAATACTTGGGTGACATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551667.1
CDS CCA 72 bp GGCTGCATGTTTCCAATGTCACCCAAGTATTCCAAGTaGCACGAAGCTGCCCGAGAACAGTGGTCAGCCGAG +
Preference number: 6 (lower is better)
Translates to: GCMFPMSPKYSK*HEAAREQWSAE
Trigger: CTCGGCTGACCACTGTTCTCGGGCAGCTTCGTGCCACTTGGAATACTTGGGTGACATTGGAAACATGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551667.1
CDS GCA 72 bp TATAACACATACAGCAGTCAACTGGGAGGCGGAGGTTaGAGTGAGCCAAGATCATGCCACTGTGTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: YNTYSSQLGGGG*SEPRSCHCVPA
Trigger: GGCTGGGACACAGTGGCATGATCTTGGCTCACTGCAACCTCCGCCTCCCAGTTGACTGCTGTATGTGTTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS CCA 72 bp ATGGGAGGTGAGTATGAGGAGTCAGAAAAGGCCTCCTaGAGGCAGGAACATCACCGATATCCCCATCGTCGT +
Preference number: 6 (lower is better)
Translates to: MGGEYEESEKAS*RQEHHRYPHRR
Trigger: ACGACGATGGGGATATCGGTGATGTTCCTGCCTCCAGGAGGCCTTTTCTGACTCCTCATACTCACCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423947.7
CDS TCA 72 bp AGGTACCGTTCATTAGGGCAGCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCATGGAGTGGGAAAGCT +
Preference number: 6 (lower is better)
Translates to: RYRSLGQLGSSD*RRNLQSWSGKA
Trigger: AGCTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGCCCTAATGAACGGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS TCA 72 bp CAGAAGGTACCGTTCATTAGGGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCAATCATGGAGTGGGAA +
Preference number: 6 (lower is better)
Translates to: QKVPFIRAAGIL*LTAEFAIMEWE
Trigger: TTCCCACTCCATGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGCCCTAATGAACGGTACCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CCA 72 bp GCTGATGATGGAGGCCGTGATGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGATTGGGTCTGTTCCATT +
Preference number: 6 (lower is better)
Translates to: ADDGGRDGRGCL*SQVFLDWVCSI
Trigger: AATGGAACAGACCCAATCCAGAAATACCTGACTCCACAGACAGCCACGTCCATCACGGCCTCCATCATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS TCA 72 bp TCCACAGCAGAACAAAAGGGGGAATGGACAATTCGGTaGGTCCTTGACGCTTCTTACCCTCCTACCTCTACC +
Preference number: 6 (lower is better)
Translates to: STAEQKGEWTIR*VLDASYPPTST
Trigger: GGTAGAGGTAGGAGGGTAAGAAGCGTCAAGGACTCACCGAATTGTCCATTCCCCCTTTTGTTCTGCTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS CCA 72 bp ATGTCTTGGGCTTTCTCTGGTACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCGTCCACTCTTATTTCC +
Preference number: 6 (lower is better)
Translates to: MSWAFSGTRRLN*VVSFHASTLIS
Trigger: GGAAATAAGAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CAA 90 bp GGCTTGATGATGCTTTCGTCTACACTGAGGACTTTGGTAAACCAGTaGAGTGTACCAAAGGCTGAGGACCGGTTTTTCAGATCATTGGGT +
Preference number: 6 (lower is better)
Translates to: GLMMLSSTLRTLVNQ*SVPKAEDRFFRSLG
Trigger: ACCCAATGATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGACGAAAGCATCATCAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CAA 90 bp AACTCTTGCTCTGGCTTGATGATGCTTTCGTCTACACTGAGGACTTaGGTAAACCAGTTGAGTGTACCAAAGGCTGAGGACCGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: NSCSGLMMLSSTLRT*VNQLSVPKAEDRFF
Trigger: GAAAAACCGGTCCTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS TCA 72 bp GAGGACTTTGGTAAACCAGTTGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATCATTGGGTTTCAGAGG +
Preference number: 6 (lower is better)
Translates to: EDFGKPVECTKG*GPVFQIIGFQR
Trigger: CCTCTGAAACCCAATGATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS GCA 72 bp CTGACGGCGGAATTTGCAATCATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTTTACAAGTCTGTTGAT +
Preference number: 6 (lower is better)
Translates to: LTAEFAIMEWES*LVDPRVYKSVD
Trigger: ATCAACAGACTTGTAAACTCTGGGATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCGCCGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CCA 72 bp GTGATGGACGTGGCTGTCTGTGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTAATGTTCTTGGGAAGT +
Preference number: 6 (lower is better)
Translates to: VMDVAVCGVRYF*IGSVPLMFLGS
Trigger: ACTTCCCAAGAACATTAATGGAACAGACCCAATCCAGAAATACCTGACTCCACAGACAGCCACGTCCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CAA 72 bp CATGCTGACTTTCCAGTGATCCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCAACACAGCAGCACAAA +
Preference number: 6 (lower is better)
Translates to: HADFPVIPNRGQ*SVQGFPTQQHK
Trigger: TTTGTGCTGCTGTGTTGGAAAACCTTGGACAGACAATTGTCCCCGATTTGGGATCACTGGAAAGTCAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441606.2
CDS CAA 90 bp ATCCGGTTCTTCTCAAATGGGGCAGTGAAAAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACACTGAGGACTTTGGTAAACCAGTTG +
Preference number: 6 (lower is better)
Translates to: IRFFSNGAVKNSCSG*MMLSSTLRTLVNQL
Trigger: CAACTGGTTTACCAAAGTCCTCAGTGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGAAGAACCGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS TCA 72 bp ACAATGCAGATTTTGATTGACTCCTCTCCCAGTCTATaGCTAAGATGTGGCCAGGGCTGCATGTTTCCAATG +
Preference number: 6 (lower is better)
Translates to: TMQILIDSSPSL*LRCGQGCMFPM
Trigger: CATTGGAAACATGCAGCCCTGGCCACATCTTAGTCATAGACTGGGAGAGGAGTCAATCAAAATCTGCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551667.1
CDS GCA 72 bp CTGAGTAATCTCATTTATCACTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGCTTGTTCTTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: LSNLIYHYVSTS*FVFWSGLFFLL
Trigger: CAGCAGGAAGAACAAGCCCGACCAGAATACGAAGCACGATGTACTCACGTAGTGATAAATGAGATTACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CAA 72 bp ATGCTTTCGTCTACACTGAGGACTTTGGTAAACCAGTaGAGTGTACCAAAGGCTGAGGACCGGTTTTTCAGA +
Preference number: 6 (lower is better)
Translates to: MLSSTLRTLVNQ*SVPKAEDRFFR
Trigger: TCTGAAAAACCGGTCCTCAGCCTTTGGTACACTCAACTGGTTTACCAAAGTCCTCAGTGTAGACGAAAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CAA 72 bp GTCAGTTTCCATGCGTCCACTCTTATTTCCAATATATaGTTCACGAGAGCCAACAGAGGGGCCAGTGGAAAA +
Preference number: 6 (lower is better)
Translates to: VSFHASTLISNI*FTRANRGASGK
Trigger: TTTTCCACTGGCCCCTCTGTTGGCTCTCGTGAACAATATATTGGAAATAAGAGTGGACGCATGGAAACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CAA 90 bp AAGGCTGAGGACCGGTTTTTCAGATCATTGGGTTTCAGAGGCAATTaGATGTGCATTATCTCAGCATACGTACATAACACCTCCCATGGT +
Preference number: 6 (lower is better)
Translates to: KAEDRFFRSLGFRGN*MCIISAYVHNTSHG
Trigger: ACCATGGGAGGTGTTATGTACGTATGCTGAGATAATGCACATCAAATTGCCTCTGAAACCCAATGATCTGAAAAACCGGTCCTCAGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS TCA 72 bp AGATCCAAGGGCTGCTTTTTGTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGAAGGTACCGTTCATTA +
Preference number: 6 (lower is better)
Translates to: RSKGCFLYMLRG*AHSLYRRYRSL
Trigger: TAATGAACGGTACCTTCTGTACAGAGAATGGGCTCATCCTCGAAGCATATACAAAAAGCAGCCCTTGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CAA 72 bp TTCTCAAATGGGGCAGTGAAAAACTCTTGCTCTGGCTaGATGATGCTTTCGTCTACACTGAGGACTTTGGTA +
Preference number: 6 (lower is better)
Translates to: FSNGAVKNSCSG*MMLSSTLRTLV
Trigger: TACCAAAGTCCTCAGTGTAGACGAAAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CAA 72 bp CATGCTGACTTTCCAGTGATCCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCAACACAAATAGGAACA +
Preference number: 6 (lower is better)
Translates to: HADFPVIPNRGQ*SVQGFPTQIGT
Trigger: TGTTCCTATTTGTGTTGGAAAACCTTGGACAGACAATTGTCCCCGATTTGGGATCACTGGAAAGTCAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679426.1
CDS TCA 72 bp CATCGTGGGGTTATCTTTTCTGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTCATGATCCAGGGCAAT +
Preference number: 6 (lower is better)
Translates to: HRGVIFSDPETL*NRPIRFMIQGN
Trigger: ATTGCCCTGGATCATGAATCTAATTGGGCGATTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCACGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS GCA 72 bp CTCCAAAAACAAGGTAACCCATACTCCCATAAATACTaGAAAGACCAGGGTTCCAAAACTGTCGAAGATGCA +
Preference number: 6 (lower is better)
Translates to: LQKQGNPYSHKY*KDQGSKTVEDA
Trigger: TGCATCTTCGACAGTTTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTATGGGTTACCTTGTTTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS GCA 72 bp AGTTGCTTTCTATGGATCCCATACTCCCATAAATACTaGAAAGACCAGGGTTCCAAAACTGTCGAAGATGCA +
Preference number: 6 (lower is better)
Translates to: SCFLWIPYSHKY*KDQGSKTVEDA
Trigger: TGCATCTTCGACAGTTTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTATGGGATCCATAGAAAGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426898.2
CDS GCA 72 bp GACGTGCTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATA +
Preference number: 6 (lower is better)
Translates to: DVLHDNDKSQLG*NHMPIVDVVFI
Trigger: TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCACGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS CAA 90 bp GTTTACAAGTCTGTTGATCCCAAACTTGCTAACATTGTTTATCACTaGATACTTGACCCGAGAGAGGATGAAGTAAACAATGCGGCTTCT +
Preference number: 6 (lower is better)
Translates to: VYKSVDPKLANIVYH*ILDPREDEVNNAAS
Trigger: AGAAGCCGCATTGTTTACTTCATCCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGTTAGCAAGTTTGGGATCAACAGACTTGTAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS TCA 72 bp ACCGGTTTTTCAGATCATTGGGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCATACGTACATAACACCT +
Preference number: 6 (lower is better)
Translates to: TGFSDHWVSEAI*CALSQHTYITP
Trigger: AGGTGTTATGTACGTATGCTGAGATAATGCACATCAAATTGCCTCTGAAACCCAATGATCTGAAAAACCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS TCA 72 bp AGAATGGACAAAGCCTATCACACTGAGGACACATTATaGTCTTGCCACCAATATCAGGATGACAAACTTCTT +
Preference number: 6 (lower is better)
Translates to: RMDKAYHTEDTL*SCHQYQDDKLL
Trigger: AAGAAGTTTGTCATCCTGATATTGGTGGCAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTGTCCATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS TCA 72 bp GTACTTACTGATCTTGTTGCTTCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCGTATGCTTGTCTTTTC +
Preference number: 6 (lower is better)
Translates to: VLTDLVASNCRP*QIRLDSYACLF
Trigger: GAAAAGACAAGCATACGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGAAGCAACAAGATCAGTAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551667.1
CDS CCA 72 bp AGAGAGGATGAAGTAAACAATGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCTATCAACTATGTAAAA +
Preference number: 6 (lower is better)
Translates to: REDEVNNAASGG*IEESISINYVK
Trigger: TTTTACATAGTTGATAGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGCATTGTTTACTTCATCCTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS GCA 72 bp TTTTTCAGATCATTGGGTTTCAGAGGCAATTTGATGTaGATTATCTCAGCATACGTACATAACACCTCCCAT +
Preference number: 6 (lower is better)
Translates to: FFRSLGFRGNLM*IISAYVHNTSH
Trigger: ATGGGAGGTGTTATGTACGTATGCTGAGATAATGCACATCAAATTGCCTCTGAAACCCAATGATCTGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS GCA 72 bp GAGATACTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATA +
Preference number: 6 (lower is better)
Translates to: EILHDNDKSQLG*NHMPIVDVVFI
Trigger: TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGTATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS GCA 72 bp TGTAGTCTCATGATCAAACTTGAAGGAATGAGAAGTTaGTTTCTATGGATCCCATACTCCCATAAATACTGC +
Preference number: 6 (lower is better)
Translates to: CSLMIKLEGMRS*FLWIPYSHKYC
Trigger: GCAGTATTTATGGGAGTATGGGATCCATAGAAAGCAACTTCTCATTCCTTCAAGTTTGATCATGAGACTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426898.2
CDS CCA 72 bp ATGATCAAACTTGAAGGAATGAGAAGTTGCTTTCTATaGATCCCATACTCCCATAAATACTGCAAAGACCAG +
Preference number: 6 (lower is better)
Translates to: MIKLEGMRSCFL*IPYSHKYCKDQ
Trigger: CTGGTCTTTGCAGTATTTATGGGAGTATGGGATCCATAGAAAGCAACTTCTCATTCCTTCAAGTTTGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426898.2
CDS CAA 72 bp AGGATGACAAACTTCTTTGCTCCATGTACAGTTATCTaGATTAAGATATCCATAGAGAAAGCAAGCCACTCC +
Preference number: 6 (lower is better)
Translates to: RMTNFFAPCTVI*IKISIEKASHS
Trigger: GGAGTGGCTTGCTTTCTCTATGGATATCTTAATCAAGATAACTGTACATGGAGCAAAGAAGTTTGTCATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS CAA 72 bp TCTGTTGATCCCAAACTTGCTAACATTGTTTATCACTaGATACTTGACCCGAGAGAGGATGAAGTAAACAAT +
Preference number: 6 (lower is better)
Translates to: SVDPKLANIVYH*ILDPREDEVNN
Trigger: ATTGTTTACTTCATCCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGTTAGCAAGTTTGGGATCAACAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000425752.6
ENST00000426898.2
ENST00000441606.2
ENST00000679426.1
ENST00000679761.1
ENST00000680201.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1