RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANO6 (Homo sapiens)

Ensembl gene IDs: ENSG00000177119

Ensembl transcript IDs: ENST00000320560.13, ENST00000423947.7, ENST00000425752.6, ENST00000426898.2, ENST00000441606.2, ENST00000550630.5, ENST00000551667.1, ENST00000679426.1, ENST00000679761.1, ENST00000680201.1, ENST00000680371.1, ENST00000680498.1, ENST00000681156.1, ENST00000681817.1

Found 1469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGCTGGATGGGAGGTGAGTATGAGGAGTCAGAAAAGGCCTCCTaGAGGCAGGAACATCACCTGTGGTCCCAGATACGCAGGAGGTTG +
Preference number: 1 (lower is better)
Translates to: PGWMGGEYEESEKAS*RQEHHLWSQIRRRL
Trigger: CAACCTCCTGCGTATCTGGGACCACAGGTGATGTTCCTGCCTCCAGGAGGCCTTTTCTGACTCCTCATACTCACCTCCCATCCAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR TCA 90 bp CAGGTCCACTGCCACACCCATCAATTTCCCCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCT +
Preference number: 1 (lower is better)
Translates to: QVHCHTHQFPQGCCL*SHLQMQPPLSADTA
Trigger: AGCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTGGGGAAATTGATGGGTGTGGCAGTGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR TCA 90 bp AGCATGACCATGATGCAAATCACCTCCCTCTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTCTTT +
Preference number: 1 (lower is better)
Translates to: SMTMMQITSLLCTQQ*PVTSRGERAWLPVF
Trigger: AAAGACAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTTGCATCATGGTCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 90 bp AGGCACTCCCCACCCAATGACCACAATGAGGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCAT +
Preference number: 1 (lower is better)
Translates to: RHSPPNDHNEGTCCF*PCTQLYPNGCVVSH
Trigger: ATGGCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTGGTCATTGGGTGGGGAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 90 bp TCCTTGCATGATGGGCTGCCATGCTCCAATGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCAC +
Preference number: 1 (lower is better)
Translates to: SLHDGLPCSNVLGFL*YQASKLGGQFPCVH
Trigger: GTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 90 bp GGGCTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCG +
Preference number: 1 (lower is better)
Translates to: GLLPLKPLTDAATIV*RHSSMLFFITASQP
Trigger: CGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR GCA 90 bp GCATTGGTCACCACAGCCAGAATTGCTATTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGGGCTTTCTCTGGTACCAGGCGTCTA +
Preference number: 1 (lower is better)
Translates to: ALVTTARIAIPCMMG*HAPMSWAFSGTRRL
Trigger: TAGACGCCTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR TCA 90 bp GGGATTCTGATAGGTTGGCTCCTCTGGTGTTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACCATGATGCAAATCACCTCCCTCTTG +
Preference number: 1 (lower is better)
Translates to: GILIGWLLWCLTASQ*SPCSMTMMQITSLL
Trigger: CAAGAGGGAGGTGATTTGCATCATGGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAAACACCAGAGGAGCCAACCTATCAGAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 90 bp CGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATTaGTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCTTGGGC +
Preference number: 1 (lower is better)
Translates to: RRESYDHGIGHHSQN*YSLHDGLPCSNVLG
Trigger: GCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CCA 90 bp CATGCTCCAATGTCTTGGGCTTTCTCTGGTACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTGGAAAG +
Preference number: 1 (lower is better)
Translates to: HAPMSWAFSGTRRLN*VVSFHASTSCPFGK
Trigger: CTTTCCAAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGACATTGGAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 90 bp ATCCCAGTGCAGTCAGACTTCATGGGGCCTGTCTTGAACTCTGATTaGATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGG +
Preference number: 1 (lower is better)
Translates to: IPVQSDFMGPVLNSD*IINTIKRDSEMGSR
Trigger: CCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGACAGGCCCCATGAAGTCTGACTGCACTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 90 bp GCTATGATCATGGCATTGGTCACCACAGCCAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCTCCAATGTCTTGGGCTTTCTCTGGT +
Preference number: 1 (lower is better)
Translates to: AMIMALVTTARIAIP*MMGCHAPMSWAFSG
Trigger: ACCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATG +
Preference number: 1 (lower is better)
Translates to: SHHCLQTQLHAFLYH*KSAVDSLTNTVDGM
Trigger: CATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR GCA 90 bp AGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAA +
Preference number: 1 (lower is better)
Translates to: SHLQMQPPLSADTAP*FSLSLQVSRGLTNK
Trigger: TTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR GCA 90 bp GCACTCCCGTCTTGGCTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: ALPSWLHDNDKSQLG*NHMPIVDVVFILLG
Trigger: CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CCA 90 bp AGCAGTATCTCAGGAGTGAAGAGAGGAACAGTGGCACTCCCGTCTTaGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCAT +
Preference number: 1 (lower is better)
Translates to: SSISGVKRGTVALPS*LRMRKSFLQWEEIH
Trigger: ATGAATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATaGCATGGGGAAATGACCCTGCATCTCCACTACAACTTTGCTCTT +
Preference number: 1 (lower is better)
Translates to: LSLQVSRGLTNKHCG*HGEMTLHLHYNFAL
Trigger: AAGAGCAAAGTTGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR GCA 90 bp CTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACAACTTTaGTCTTTTGGGCATCTTAACAGTGTCAGATATTACATTTGGTGC +
Preference number: 1 (lower is better)
Translates to: LWMAWGNDPASPLQL*SFGHLNSVRYYIWC
Trigger: GCACCAAATGTAATATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR CCA 90 bp GGTCTGAGAGCAGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCTaGAGTCCATCTTATGTTCAACTTCCTAGGGCAACCTTCAGAATA +
Preference number: 1 (lower is better)
Translates to: GLRAGLHGKTGFLIP*SPSYVQLPRATFRI
Trigger: TATTCTGAAGGTTGCCCTAGGAAGTTGAACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR CCA 90 bp AAAGGAAAAGCGACTTGTCCACAGAGGTCTGAGAGCAGGGTTGCATaGAAAAACAGGGTTTCTAATTCCCTGGAGTCCATCTTATGTTCA +
Preference number: 1 (lower is better)
Translates to: KGKATCPQRSESRVA*KNRVSNSLESILCS
Trigger: TGAACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACCTCTGTGGACAAGTCGCTTTTCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR TCA 90 bp TTCATTTCTCCATCCCAGTGCAGTCAGACTTCATGGGGCCTGTCTTaGACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAA +
Preference number: 1 (lower is better)
Translates to: FISPSQCSQTSWGLS*TLIASLTRSRETVK
Trigger: TTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGACAGGCCCCATGAAGTCTGACTGCACTGGGATGGAGAAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 90 bp ACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATaGAGGATGCAAGGAAGCCACATTCTTTATGGCAGAGACTTTGGT +
Preference number: 1 (lower is better)
Translates to: TIRQLHQITGPRVTG*RMQGSHILYGRDFG
Trigger: ACCAAAGTCTCTGCCATAAAGAATGTGGCTTCCTTGCATCCTCCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 90 bp ATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTACAATACTGCTTTGATGGATCCTACA +
Preference number: 1 (lower is better)
Translates to: INTIKRDSEMGSRIH*DNSKAYNTALMDPT
Trigger: TGTAGGATCCATCAAAGCAGTATTGTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 90 bp CTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: LSNEKLHDNDKSQLG*NHMPIVDVVFILLG
Trigger: CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR GCA 90 bp AATGGGGTCCCGGATCCACTGGGACAATTCAAAAGCCTACAATACTaGTTTGATGGATCCTACATAATTACTTACAAATCATTCATGGCA +
Preference number: 1 (lower is better)
Translates to: NGVPDPLGQFKSLQY*FDGSYIITYKSFMA
Trigger: TGCCATGAATGATTTGTAAGTAATTATGTAGGATCCATCAAAGCAGTATTGTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 90 bp GTGCTCCTGGAAGATAAAAAGTGTCACTGTGGATTAGGACAAATATaGTTCAAAACCTTGCTATCTTCACTCCAACCTACTAAGAGTATT +
Preference number: 1 (lower is better)
Translates to: VLLEDKKCHCGLGQI*FKTLLSSLQPTKSI
Trigger: AATACTCTTAGTAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATATTTGTCCTAATCCACAGTGACACTTTTTATCTTCCAGGAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 90 bp GATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGCATTTaGAAGAAAGTTTTGAAGACATATGTGAACACATTCAAAATGTTA +
Preference number: 1 (lower is better)
Translates to: DAAWEEVTQPCMNSI*KKVLKTYVNTFKML
Trigger: TAACATTTTGAATGTGTTCACATATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTAC +
Preference number: 2 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLGTCCF*PCTQLY
Trigger: GTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIGARRA*QDRSAA
Trigger: TGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 2 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATACAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 2 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGLTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTATTCCCTTGAGATCTaGAAAGCAGTCAACATTGAT +
Preference number: 2 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLYSLEI*KAVNID
Trigger: ATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTTTATTACTCTTAACTaGCTGATTGGCTCTAGAGGA +
Preference number: 2 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLFITLN*LIGSRG
Trigger: TCCTCTAGAGCCAATCAGGCAGTTAAGAGTAATAAA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp TGTCCACAGAGGTCTGAGAGCAGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCAGGAACATCACCTGTaGTCCCAGATACGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: CPQRSESRVAWKNRVSNSQEHHL*SQIRRR
Trigger: CCTCCTGCGTATCTGGGACCACAGGTGATGTTCCTG...GGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACCTCTGTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR CAA 90 bp CAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAGGCGTCTAAACTGGGTGGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: QNCYSLHDGLPCSNV*GFLWYQASKLGGQF
Trigger: AAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CAA 90 bp AGCTATGATCATGGCATTGGTCACCACAGCCAGAATTGCTATTCCTaGCATGATGGGCTGCCATGCTCCAATGTCTTGGGCTTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: SYDHGIGHHSQNCYS*HDGLPCSNVLGFLW
Trigger: CCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 2 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGAGACTTTGGTGTGTTaGTCACTTTGGCATACAGAA +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSETLVC*SLWHTE
Trigger: TTCTGTATGCCAAAGTGATCAACACACCAAAGTCTC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATTACTCTTAACTGCCTaGTTGGCTCTAGAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRLLLTA*LALEEA
Trigger: AGCCTCCTCTAGAGCCAATCAGGCAGTTAAGAGTAA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 2 (lower is better)
Translates to: LIASLTRSRETVKWGPGSSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 2 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCGARRA*QDRSAA
Trigger: TGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 2 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCACTGTAAGGAAAAGATaGCCCTGGAACAGATCTAGC +
Preference number: 2 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSTVRKR*PWNRSS
Trigger: GCTAGATCTGTTCCAGGGTCATCTTTTCCTTACAGT...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTTACTCTTAACTGCCTaGTTGGCTCTAGAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLLLTA*LALEEA
Trigger: AGCCTCCTCTAGAGCCAATCAGGCAGTTAAGAGTAA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 2 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGG +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDRETVK*GPGSTG
Trigger: CCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp ATGTTTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGTGAGGATATCTACTCAGAAAAGGCCTCCTaGAGGCAGGAACATCACCTG +
Preference number: 2 (lower is better)
Translates to: MFLSHRAVTEQHSSEDIYSEKAS*RQEHHL
Trigger: CAGGTGATGTTCCTGCCTCCAGGAGGCCTTTTCTGA...GTAGATATCCTCACTGGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR-3UTR CCA 90 bp TTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGTGAGGATATCTACTGCTTTTCCAACACCAGGCTaGATGGGAGGTGAGTATGAG +
Preference number: 2 (lower is better)
Translates to: FSVTVQSLNNTPVRISTAFPTPG*MGGEYE
Trigger: CTCATACTCACCTCCCATCCAGCCTGGTGTTGGAAA...AGCAGTAGATATCCTCACTGGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 2 (lower is better)
Translates to: AATIVCRHSSMLFFITASVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CAA 90 bp AAGCAGTATCTCAGGAGTGAAGAGAGGAACAGTGGCACTCCCGTCTaGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCA +
Preference number: 2 (lower is better)
Translates to: KQYLRSEERNSGTPV*AANEKEFPSVGRNS
Trigger: TGAATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: LIASLTRSRETVKWGPGSQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCCACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 2 (lower is better)
Translates to: LIASLTRSRETVKWGPGSHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDLTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTCATGGGGCCTGTCTTaGACTCTGATTGCATCATTA +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYSWGLS*TLIASL
Trigger: TAATGATGCAATCAGAGTTCAAGACAGGCCCCATGA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 2 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 2 (lower is better)
Translates to: LIASLTRSRETVKWGPGSTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CAA 90 bp TTGATCACTTTGGCATACAGAAATAAGCCAATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCACCCAATGACCACAATGAGGGCACTT +
Preference number: 2 (lower is better)
Translates to: LITLAYRNKPIPADS*TKGTPHPMTTMRAL
Trigger: AAGTGCCCTCATTGTGGTCATTGGGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAATTGGCTTATTTCTGTATGCCAAAGTGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 2 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACA +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCHNEGT*CFCPCT
Trigger: TGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 2 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 2 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCGTCTTGGCTGCGAATaGGAAAGAGTTTCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: TLHLHYNFALLGILTVSDRLGCE*ERVSFS
Trigger: ACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTTTCCTTTTCTATGCTaGCATACATGGCGAGTAACT +
Preference number: 2 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGFPFLC*HTWRVT
Trigger: AGTTACTCGCCATGTATGTCAGCATAGAAAAGGAAA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATATTCCCTTGAGATCTaGAAAGCAGTCAACATTGAT +
Preference number: 2 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRYSLEI*KAVNID
Trigger: ATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTAC +
Preference number: 2 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGGTCCF*PCTQLY
Trigger: GTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATTTATTACTCTTAACTaGCTGATTGGCTCTAGAGGA +
Preference number: 2 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRFITLN*LIGSRG
Trigger: TCCTCTAGAGCCAATCAGGCAGTTAAGAGTAATAAA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCTTATGGCAGAGACTTTaGTGTGTTGATCACTTTGGC +
Preference number: 2 (lower is better)
Translates to: LIASLTRSRETVKWGPGSLWQRL*CVDHFG
Trigger: GCCAAAGTGATCAACACACCAAAGTCTCTGCCATAA...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 90 bp AGGATGCAAGGAAGCCACATTCTTTATGGCAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGAAATAAGCCAATTCCTGCAGACTCC +
Preference number: 2 (lower is better)
Translates to: RMQGSHILYGRDFGV*ITLAYRNKPIPADS
Trigger: GGAGTCTGCAGGAATTGGCTTATTTCTGTATGCCAAAGTGATCAACACACCAAAGTCTCTGCCATAAAGAATGTGGCTTCCTTGCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 90 bp ATTCATTTCTCCATCCCAGTGCAGTCAGACTTCATGGGGCCTGTCTaGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAA +
Preference number: 2 (lower is better)
Translates to: IHFSIPVQSDFMGPV*NSDCIINTIKRDSE
Trigger: TTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGACAGGCCCCATGAAGTCTGACTGCACTGGGATGGAGAAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 90 bp GTATGGTTACCCAGGTCAGAGTACGGGTTTCCCTTGCTTTTGTTTTaGAAGTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTAC +
Preference number: 2 (lower is better)
Translates to: VWLPRSEYGFPLLLF*KSATLKMERVLLMY
Trigger: GTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAAAGCAAGGGAAACCCGTACTCTGACCTGGGTAACCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 2 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGATAGGTTGGCTCCTCTaGTGTTTAACAGCATCCCAG +
Preference number: 2 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGIGWLL*CLTASQ
Trigger: CTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 90 bp TGGCATGGGGAAATGACCCTGCATCTCCACTACAACTTTGCTCTTTaGGGCATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAA +
Preference number: 2 (lower is better)
Translates to: WHGEMTLHLHYNFAL*GILTVSDITFGAFQ
Trigger: TTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGTCATTTCCCCATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR TCA 90 bp AGCAGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCTGGAGTCCATCTTATGTGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 2 (lower is better)
Translates to: SRVAWKNRVSNSLESILCVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...ACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTTTGTTTTTGAAGTCTaGGACTTTGAAGATGGAGAG +
Preference number: 2 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVFVFEV*DFEDGE
Trigger: CTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAAA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CAA 90 bp CACATTCAAAATGTTAACAGAGATTCTGCCGTATTCATAAGCTTGTaGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACA +
Preference number: 2 (lower is better)
Translates to: HIQNVNRDSAVFISL*ASRLKSFPMRSSMT
Trigger: TGTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATGAATACGGCAGAATCTCTGTTAACATTTTGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR CAA 90 bp GAACACATTCAAAATGTTAACAGAGATTCTGCCGTATTCATAAGCTaGTTGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATG +
Preference number: 2 (lower is better)
Translates to: EHIQNVNRDSAVFIS*LASRLKSFPMRSSM
Trigger: CATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATGAATACGGCAGAATCTCTGTTAACATTTTGAATGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR TCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGAAAGCCTCTAAAATCTaGGTTTTCCTTTGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGKASKI*VFLCCW
Trigger: CCAGCAGCAAAGGAAAACTCAGATTTTAGAGGCTTT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGGATTAGGACAAATATaGTTCAAAACCTTGCTATCT +
Preference number: 2 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIGLGQI*FKTLLS
Trigger: AGATAGCAAGGTTTTGAAGCATATTTGTCCTAATCC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAAAGCCTACAATACTaGTTTGATGGATCCTACATA +
Preference number: 2 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVKSLQY*FDGSYI
Trigger: TATGTAGGATCCATCAAAGCAGTATTGTAGGCTTTT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGATATTACATTTGGTaGCTTTCAATATGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVRYYIW*LSICRG
Trigger: CCCTCTACATATTGAAAGGCACCAAATGTAATATCT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACATGCGTCCACTAGTTaGCCTTTTGGAAAGCTCATC +
Preference number: 2 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFIHASTS*PFGKLI
Trigger: GATGAGCTTTCCAAAAGGGCAACTAGTGGACGCATG...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR GCA 90 bp TTGTTTTTGAAGTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 2 (lower is better)
Translates to: LFLKSATLKMERVLLMYPRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...AGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CAA 90 bp CGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGCATTaGGAAGAAAGTTTTGAAGACATATGTGAACACATTCAAAATGTT +
Preference number: 2 (lower is better)
Translates to: RCSMGRSHTAMHEQH*EESFEDICEHIQNV
Trigger: AACATTTTGAATGTGTTCACATATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR GCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGTATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTATTCCCTTGAGATCTaGAAAGCAGTCAACATTGAT +
Preference number: 2 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGYSLEI*KAVNID
Trigger: ATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATA...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR GCA 90 bp CTTATGCCACAATGTGTGAAAAGCATCATGAATAGTTCTACTTCAGTTAAGCTGGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 2 (lower is better)
Translates to: LMPQCVKSIMNSSTSVKLGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...CAGCTTAACTGAAGTAGAACTATTCATGATGCTTTTCACACATTGTGGCATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR TCA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 2 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 90 bp GAAGAAGTCACACAGCCATGCATGAACAGCATTTGGAAGAAAGTTTaGAAGACATATGTGAACACATTCAAAATGTTAACAGAGATTCTG +
Preference number: 2 (lower is better)
Translates to: EEVTQPCMNSIWKKV*KTYVNTFKMLTEIL
Trigger: CAGAATCTCTGTTAACATTTTGAATGTGTTCACATATGTCTTCAAAACTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGACTTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR GCA 72 bp TTCCCCAGGGCTGCTGCCTCTGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAGACACAGCTCCATGCT +
Preference number: 3 (lower is better)
Translates to: FPRAAASEATYR*SHHCLQTQLHA
Trigger: AGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR TCA 72 bp ATGATGCAAATCACCTCCCTCTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTC +
Preference number: 3 (lower is better)
Translates to: MMQITSLLCTQQ*PVTSRGERAWL
Trigger: GAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTTGCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 72 bp GCTAGGCTGAGCAAAAGTGAGGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAG +
Preference number: 3 (lower is better)
Translates to: ARLSKSEGARRA*QDRSAAGSNLQ
Trigger: CTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCCCTCACTTTTGCTCAGCCTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCAC +
Preference number: 3 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSIPADS*TKGTPH
Trigger: GTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAAT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 72 bp AGGCACTCCCCACCCAATGACCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACACAGTTGTACCCCAAT +
Preference number: 3 (lower is better)
Translates to: RHSPPNDHNEGT*CFCPCTQLYPN
Trigger: ATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTGGTCATTGGGTGGGGAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 72 bp CCACCCAATGACCACAATGAGGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTACCCCAATGGCTGTGTA +
Preference number: 3 (lower is better)
Translates to: PPNDHNEGTCCF*PCTQLYPNGCV
Trigger: TACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTGGTCATTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 72 bp ATGTCTTGGGCTTTCTCTGGTACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCT +
Preference number: 3 (lower is better)
Translates to: MSWAFSGTRRLN*VVSFHASTSCP
Trigger: AGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CAA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGTGGCACTCCCGTCTaGGCTGCGAATGAGAAAGAG +
Preference number: 3 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVSGTPV*AANEKE
Trigger: CTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 72 bp ACCACAGCCAGAATTGCTATTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGGGCTTTCTCTGGTACC +
Preference number: 3 (lower is better)
Translates to: TTARIAIPCMMG*HAPMSWAFSGT
Trigger: GGTACCAGAGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 72 bp ATGGCATTGGTCACCACAGCCAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCTCCAATGTCTTGGGCT +
Preference number: 3 (lower is better)
Translates to: MALVTTARIAIP*MMGCHAPMSWA
Trigger: AGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CCA 72 bp TTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGT +
Preference number: 3 (lower is better)
Translates to: LLFLPMHTVVPQ*LCSEPFTKAAG
Trigger: ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 72 bp CAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATaGCATGGGGAAATGACCCTGCATCTCCACTACAAC +
Preference number: 3 (lower is better)
Translates to: QVSRGLTNKHCG*HGEMTLHLHYN
Trigger: GTTGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR CCA 72 bp GCGACTTGTCCACAGAGGTCTGAGAGCAGGGTTGCATaGAAAAACAGGGTTTCTAATTCCCTGGAGTCCATC +
Preference number: 3 (lower is better)
Translates to: ATCPQRSESRVA*KNRVSNSLESI
Trigger: GATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACCTCTGTGGACAAGTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGCAAAGCAGTCAACATaGATTAGGCACGGAACCTCC +
Preference number: 3 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGAKQST*IRHGTS
Trigger: GGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTGC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCAC +
Preference number: 3 (lower is better)
Translates to: LIASLTRSRETVKWGPGSIPADS*TKGTPH
Trigger: GTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAAT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGA +
Preference number: 3 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSRDFGV*ITLAYR
Trigger: TCTGTATGCCAAAGTGATCAACACACCAAAGTCTCT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR TCA 72 bp ATAGGTTGGCTCCTCTGGTGTTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACCATGATGCAAATCACC +
Preference number: 3 (lower is better)
Translates to: IGWLLWCLTASQ*SPCSMTMMQIT
Trigger: GGTGATTTGCATCATGGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR TCA 72 bp CATTGGTCACCACAGCCAGAATTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAATGTCTTGGGCTTTCT +
Preference number: 3 (lower is better)
Translates to: HWSPQPELLFLA*WAAMLQCLGLS
Trigger: AGAAAGCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CAA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGCAAAGCAGTCAACATaGATTAGGCACGGAACCTCC +
Preference number: 3 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVAKQST*IRHGTS
Trigger: GGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTGC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTGGGATTCTGATAGGTaGGCTCCTCTGGTGTTTAAC +
Preference number: 3 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYWDSDR*APLVFN
Trigger: GTTAAACACCAGAGGAGCCAACCTATCAGAATCCCA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTAGTGGCACTCCCGTCTaGGCTGCGAATGAGAAAGAG +
Preference number: 3 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCSGTPV*AANEKE
Trigger: CTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCACT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGCCACTAGTTGCCCTTTaGGAAAGCTCATCCTGCAAA +
Preference number: 3 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGPLVAL*ESSSCK
Trigger: TTTGCAGGATGAGCTTTCCAAAAGGGCAACTAGTGG...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CAA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATGGAGAGAGTGTTGTaGATGTACCCTTCCATGGTG +
Preference number: 3 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYMERVL*MYPSMV
Trigger: CACCATGGAAGGGTACATCAACAACACTCTCTCCAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 72 bp CCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTTTTCTTTATCACTGCA +
Preference number: 3 (lower is better)
Translates to: PLKPLTDAATIV*RHSSMLFFITA
Trigger: TGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR GCA 72 bp AGCTATGATCATGGCATTGGTCACCACAGCCAGAATTaGTATTCCTTGCATGATGGGCTGCCATGCTCCAAT +
Preference number: 3 (lower is better)
Translates to: SYDHGIGHHSQN*YSLHDGLPCSN
Trigger: ATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CAA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTGGGATTCTGATAGGTaGGCTCCTCTGGTGTTTAAC +
Preference number: 3 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIWDSDR*APLVFN
Trigger: GTTAAACACCAGAGGAGCCAACCTATCAGAATCCCA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCCATGCTCCAATGTCTaGGGCTTTCTCTGGTACCAG +
Preference number: 3 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCPCSNV*GFLWYQ
Trigger: CTGGTACCAGAGAAAGCCCAAGACATTGGAGCATGG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR-3UTR CAA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCAGAATTGCTATTCCTaGCATGATGGGCTGCCATGC +
Preference number: 3 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTQNCYS*HDGLPC
Trigger: GCATGGCAGCCCATCATGCAAGGAATAGCAATTCTG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 72 bp TGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCACTAACAAACACTGTG +
Preference number: 3 (lower is better)
Translates to: CLQTQLHAFLYH*KSAVDSLTNTV
Trigger: CACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
3UTR CCA 72 bp GCAGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCTaGAGTCCATCTTATGTTCAACTTCCTAGGGCAACC +
Preference number: 3 (lower is better)
Translates to: AGLHGKTGFLIP*SPSYVQLPRAT
Trigger: GGTTGCCCTAGGAAGTTGAACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR-3UTR CAA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATCTGAGTCTCTTTACTaGATTATGAATAAGCTGGGT +
Preference number: 3 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRSESLY*IMNKLG
Trigger: ACCCAGCTTATTCATAATCAAGTAAAGAGACTCAGA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp AGCAGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCTGGAGTCCATCTTATGTCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCA +
Preference number: 3 (lower is better)
Translates to: SRVAWKNRVSNSLESILCPNRGQ*SVQGFP
Trigger: TGGAAAACCTTGGACAGACAATTGTCCCCGATTTGG...ACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR CCA 72 bp ATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTACAATACTGCTTTGATG +
Preference number: 3 (lower is better)
Translates to: IKRDSEMGSRIH*DNSKAYNTALM
Trigger: CATCAAAGCAGTATTGTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CCA 72 bp ATTGCATCATTAACACGATCAAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGGACAATTCAAAAGCCT +
Preference number: 3 (lower is better)
Translates to: IASLTRSRETVK*GPGSTGTIQKP
Trigger: AGGCTTTTGAATTGTCCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCATATGCTTCAAAACCTaGCTATCTTCACTCCAACCT +
Preference number: 3 (lower is better)
Translates to: LIASLTRSRETVKWGPGSICFKT*LSSLQP
Trigger: AGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATAT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTTCATGGGGCCTGTCTaGAACTCTGATTGCATCATT +
Preference number: 3 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCFMGPV*NSDCII
Trigger: AATGATGCAATCAGAGTTCAAGACAGGCCCCATGAA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCAC +
Preference number: 3 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSIPADS*TKGTPH
Trigger: GTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAAT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTCTGAGTCTCTTTACTaGATTATGAATAAGCTGGGT +
Preference number: 3 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVSESLY*IMNKLG
Trigger: ACCCAGCTTATTCATAATCAAGTAAAGAGACTCAGA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp TTGTTTTTGAAGTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTGCTATGATCATGGCATaGGTCACCACAGCCAGAATT +
Preference number: 3 (lower is better)
Translates to: LFLKSATLKMERVLLMYPAMIMA*VTTARI
Trigger: AATTCTGGCTGTGGTGACCAATGCCATGATCATAGC...AGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR CCA 72 bp AACATTCTAAATGCTATCTGGAACATCGATGCAGCATaGGAAGAAGTCACACAGCCATGCATGAACAGCATT +
Preference number: 3 (lower is better)
Translates to: NILNAIWNIDAA*EEVTQPCMNSI
Trigger: AATGCTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATAGCATTTAGAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR CAA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGA +
Preference number: 3 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGRDFGV*ITLAYR
Trigger: TCTGTATGCCAAAGTGATCAACACACCAAAGTCTCT...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGATATGCTTCAAAACCTaGCTATCTTCACTCCAACCT +
Preference number: 3 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWICFKT*LSSLQP
Trigger: AGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATAT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp TACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTGACTGAATCTGGCCAAGTATTCATAAGCTTGTaGGCATCGAGGCTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: YYLYQMFAQAVEVTESGQVFISL*ASRLKS
Trigger: GCTCTTCAGCCTCGATGCCAACAAGCTTATGAATAC...TTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR CAA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCTGAGTCTCTTTACTaGATTATGAATAAGCTGGGT +
Preference number: 3 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGSESLY*IMNKLG
Trigger: ACCCAGCTTATTCATAATCAAGTAAAGAGACTCAGA...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 72 bp TCTTGGCTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATA +
Preference number: 3 (lower is better)
Translates to: SWLHDNDKSQLG*NHMPIVDVVFI
Trigger: TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
3UTR GCA 72 bp GAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTAGATGTTGTGTTTATA +
Preference number: 3 (lower is better)
Translates to: EKLHDNDKSQLG*NHMPIVDVVFI
Trigger: TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR-3UTR CAA 90 bp TACTTGATTATGAATAAGCTGGGTATACTCCTGTCTCTAGTACAATCAGACAGTAGAGACTTTGGTGTGTaGATCACTTTGGCATACAGA +
Preference number: 3 (lower is better)
Translates to: YLIMNKLGILLSLVQSDSRDFGV*ITLAYR
Trigger: TCTGTATGCCAAAGTGATCAACACACCAAAGTCTCT...ACTGTCTGATTGTACTAGAGACAGGAGTATACCCAGCTTATTCATAATCAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR TCA 72 bp ACTATTTATATCAAATGTTTGCACAGGCTGTTGAAGTaGCTGAATCTGGCCAAATATTCTGAGCGTTTCGGA +
Preference number: 3 (lower is better)
Translates to: TIYIKCLHRLLK*LNLAKYSERFG
Trigger: TCCGAAACGCTCAGAATATTTGGCCAGATTCAGTCACTTCAACAGCCTGTGCAAACATTTGATATAAATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
3UTR GCA 72 bp CCGGATCCACTGGGACAATTCAAAAGCCTACAATACTaGTTTGATGGATCCTACATAATTACTTACAAATCA +
Preference number: 3 (lower is better)
Translates to: PDPLGQFKSLQY*FDGSYIITYKS
Trigger: TGATTTGTAAGTAATTATGTAGGATCCATCAAAGCAGTATTGTAGGCTTTTGAATTGTCCCAGTGGATCCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR GCA 72 bp GAAGATAAAAAGTGTCACTGTGGATTAGGACAAATATaGTTCAAAACCTTGCTATCTTCACTCCAACCTACT +
Preference number: 3 (lower is better)
Translates to: EDKKCHCGLGQI*FKTLLSSLQPT
Trigger: AGTAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATATTTGTCCTAATCCACAGTGACACTTTTTATCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR-3UTR CAA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTATATGCTTCAAAACCTaGCTATCTTCACTCCAACCT +
Preference number: 3 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFICFKT*LSSLQP
Trigger: AGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATAT...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAAGGACGCCTCTCGCCTaGCGAGCGGAGCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRRTPLA*RAEPGD
Trigger: GTCTCCGGGCTCCGCTCGGCAGGCGAGAGGCGTCCT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320560.13
ENST00000423947.7
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGAGGACGCCTCTCGCCTaGCGAGCGGAGCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGRTPLA*RAEPGD
Trigger: GTCTCCGGGCTCCGCTCGGCAGGCGAGAGGCGTCCT...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLLTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGGGGCGTGTGTCGCTTaGGCTCAGGGGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASGACVA*AQGPLS
Trigger: GCTCAGCGGCCCCTGAGCCCAAGCGACACACGCCCC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLEATYR*SHHCLQ
Trigger: CTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCAACACCAGGCTGGATGGGAGGTGAGTATGAGGAGTCAGAAAAGGCCTCCTGGGCGCTACTCCACTACTaGACTTCAGCCCGATATCCC +
Preference number: 4 (lower is better)
Translates to: PTPGWMGGEYEESEKASWALLHY*TSARYP
Trigger: GGGATATCGGGCTGAAGTGCAGTAGTGGAGTAGCGC...CCAGGAGGCCTTTTCTGACTCCTCATACTCACCTCCCATCCAGCCTGGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGGGGCGTGTGTCGCTTaGGCTCAGGGGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYGACVA*AQGPLS
Trigger: GCTCAGCGGCCCCTGAGCCCAAGCGACACACGCCCC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACCAGGCTGGATGGGAGGTGAGTATGAGGAGTCAGAAAAGGCCTCCTGGAGGCTTTCCAACACCAGGCTaGATGGGAGGTGAGTATGAG +
Preference number: 4 (lower is better)
Translates to: HQAGWEVSMRSQKRPPGGFPTPG*MGGEYE
Trigger: CTCATACTCACCTCCCATCCAGCCTGGTGTTGGAAA...GCCTCCAGGAGGCCTTTTCTGACTCCTCATACTCACCTCCCATCCAGCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSLCTQQ*PVTSRG
Trigger: ACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGGGTTGCATGGAAAAACAGGGTTTCTAATTCCCTGGAGTCCATCTTATGTTCAGGGGCGTGTGTCGCTTaGGCTCAGGGGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RVAWKNRVSNSLESILCSGACVA*AQGPLS
Trigger: GCTCAGCGGCCCCTGAGCCCAAGCGACACACGCCCC...TGAACATAAGATGGACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKGARRA*QDRSAA
Trigger: TGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSGSRIH*DNSKAY
Trigger: GTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGATTCCTGCAGACTCCTTaGCAAAAGGCACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRFLQTP*QKALPT
Trigger: GGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAA...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTCCTGCAGACTCCTTaGCAAAAGGCACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHFLQTP*QKALPT
Trigger: GGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQISAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILCTQQ*PVTSRG
Trigger: ACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGGACGCCTCTCGCCTaGCGAGCGGAGCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGRTPLA*RAEPGD
Trigger: GTCTCCGGGCTCCGCTCGGCAGGCGAGAGGCGTCCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320560.13
ENST00000423947.7
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACCACAGCCAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: HHSQNCYSLHDGLPCSNVSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...GACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GTACCCTTCCATGGTGTAGGAAGTGTGGTCCCCGTAGGGAGGGACGGAGAAGGAGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: VPFHGVGSVVPVGRDGEGAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...TCCTTCTCCGTCCCTCCCTACGGGGACCACACTTCCTACACCATGGAAGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSEATYR*SHHCLQ
Trigger: CTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGGGGCGTGTGTCGCTTaGGCTCAGGGGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGGACVA*AQGPLS
Trigger: GCTCAGCGGCCCCTGAGCCCAAGCGACACACGCCCC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680201.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp TTTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGTGAGGATATCTACTGCAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLSHRAVTEQHSSEDIYCNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...GCAGTAGATATCCTCACTGGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQITRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATACTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGG +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSRETVK*GPGSTG
Trigger: CCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCT...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHRETVK*GPGSTG
Trigger: CCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCGACTTGTCCACAGAGGTCTGAGAGCAGGGTTGCATGGAAAAACAGGGTTTCTCAGGAACATCACCTGTaGTCCCAGATACGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ATCPQRSESRVAWKNRVSQEHHL*SQIRRR
Trigger: CCTCCTGCGTATCTGGGACCACAGGTGATGTTCCTG...AGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACCTCTGTGGACAAGTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR CAA 72 bp CATGGCATTGGTCACCACAGCCAGAATTGCTATTCCTaGCATGATGGGCTGCCATGCTCCAATGTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: HGIGHHSQNCYS*HDGLPCSNVLG
Trigger: GCCCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSLCTQQ*PVTSRG
Trigger: ACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLCTQQ*PVTSRG
Trigger: ACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIGTCCF*PCTQLY
Trigger: GTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCATGCGTCCACTAGTTaGCCTTTTGGAAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSHASTS*PFGKLI
Trigger: GATGAGCTTTCCAAAAGGGCAACTAGTGGACGCATG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACCACAGCCAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: HHSQNCYSLHDGLPCSNVLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...GACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASGARRA*QDRSAA
Trigger: TGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGG +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHRETVK*GPGSTG
Trigger: CCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGTGGCACTCCCGTCTTaGCTGCGAATGAGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKVALPS*LRMRKS
Trigger: ACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCAC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGTGGCACTCCCGTCTTaGCTGCGAATGAGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMVALPS*LRMRKS
Trigger: ACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCAC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTCAACACCAGGCTGGATaGGAGGTGAGTATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGQHQAG*EVSMRS
Trigger: ACTCCTCATACTCACCTCCCATCCAGCCTGGTGTTG...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423947.7
CDS-3UTR CCA 90 bp TCCCAAATCGGGGACAATTGTCTGTCCAAGGTTTTCCAACACCAGGCTGGATGGCAACACCAGGCTGGATaGGAGGTGAGTATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SQIGDNCLSKVFQHQAGWQHQAG*EVSMRS
Trigger: ACTCCTCATACTCACCTCCCATCCAGCCTGGTGTTG...CCATCCAGCCTGGTGTTGGAAAACCTTGGACAGACAATTGTCCCCGATTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCACTGTAAGGAAAAGATaGCCCTGGAACAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSTVRKR*PWNRSS
Trigger: GCTAGATCTGTTCCAGGGTCATCTTTTCCTTACAGT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATACACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACAGTAGACTGCTAGGCTaGGCAAAAGTGAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHSRLLG*AKVRGQ
Trigger: TTGCCCCCTCACTTTTGCTCAGCCTAGCAGTCTACT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATAATTCGGTGAGTCCTTaGCGCTTCTTACCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHNSVSP*RFLPSY
Trigger: GTAGGAGGGTAAGAAGCGTCAAGGACTCACCGAATT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGGACGCCTCTCGCCTaGCGAGCGGAGCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRTPLA*RAEPGD
Trigger: GTCTCCGGGCTCCGCTCGGCAGGCGAGAGGCGTCCT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGCACTTGCTGTTTCTaGCCATGCACACAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRGTCCF*PCTQLY
Trigger: GTACAACTGTGTGCATGGGCAGAAACAGCAAGTGCC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMHNEGT*CFCPCT
Trigger: TGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTATTTCTCCATCCCAGTaGAGTCAGACTTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGISPSQ*SQTSWG
Trigger: GCCCCATGAAGTCTGACTGCACTGGGATGGAGAAAT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAATTTCTCCATCCCAGTaGAGTCAGACTTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRISPSQ*SQTSWG
Trigger: GCCCCATGAAGTCTGACTGCACTGGGATGGAGAAAT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATCTTCACAGGTCCACTaGCACACCCATCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKSSQVH*HTHQFP
Trigger: GGGAAATTGATGGGTGTGGCAGTGGACCTGTGAAGA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGGGGCGTGTGTCGCTTaGGCTCAGGGGCCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWGACVA*AQGPLS
Trigger: GCTCAGCGGCCCCTGAGCCCAAGCGACACACGCCCC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp TTTAAGATAGCTAAAATGTTTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FKIAKMFLSHRAVTEQHSRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...GGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAAACATTTTAGCTATCTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680201.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQISQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAACACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQITVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAATAGGTTGGCTCCTCTaGTGTTTAACAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIIGWLL*CLTASQ
Trigger: CTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGGGATTCTGATAGGTTaGCTCCTCTGGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSGILIG*LLWCLT
Trigger: TGTTAAACACCAGAGGAGCCAACCTATCAGAATCCC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHGSRIH*DNSKAY
Trigger: GTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGTCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGAGTAGACTGCTAGGCTaGGCAAAAGTGAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVSRLLG*AKVRGQ
Trigger: TTGCCCCCTCACTTTTGCTCAGCCTAGCAGTCTACT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCTTGTGCACCCAGCAATaGCCTGTTACCAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSLCTQQ*PVTSRG
Trigger: ACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAA...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTTAACAGCATCCCAGTaGAGCCCATGCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVLTASQ*SPCSMT
Trigger: GGTCATGCTGCATGGGCTTCACTGGGATGCTGTTAA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAACGTCTTGGCTGCGAATaGGAAAGAGTTTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKRLGCE*ERVSFS
Trigger: ACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACG...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACGTCTTGGCTGCGAATaGGAAAGAGTTTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRRLGCE*ERVSFS
Trigger: ACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAAGGGAAGACTTTGGTaGCAGTTTATAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSKGRLW*QFIRWP
Trigger: AGGCCATCTTATAAACTGTCACCAAAGTCTTCCCTT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACATGCAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PMRSSMTMIKASLAAITCSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...GCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp TGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGGCCTGGCTCCCTGGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: CAPSNDLLPVGVRGPGSLDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...CAGGGAGCCAGGCCCTCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAACGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYHNEGT*CFCPCT
Trigger: TGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATTTCTCCATCCCAGTaGAGTCAGACTTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYISPSQ*SQTSWG
Trigger: GCCCCATGAAGTCTGACTGCACTGGGATGGAGAAAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGCAGCCACCATTGTCTaGAGACACAGCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASAATIV*RHSSML
Trigger: AAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGEATYR*SHHCLQ
Trigger: CTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEILGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGGGGCAAGACGTGCATaGCAAGACAGGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDGARRA*QDRSAA
Trigger: TGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTATAGGTTGGCTCCTCTaGTGTTTAACAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGIGWLL*CLTASQ
Trigger: CTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAATAGGTTGGCTCCTCTaGTGTTTAACAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRIGWLL*CLTASQ
Trigger: CTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGTGGCACTCCCGTCTTaGCTGCGAATGAGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVVALPS*LRMRKS
Trigger: ACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCAC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCGTGGCACTCCCGTCTTaGCTGCGAATGAGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSVALPS*LRMRKS
Trigger: ACTCTTTCTCATTCGCAGCCAAGACGGGAGTGCCAC...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CCA 90 bp TTTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGTGAGGATATCTACTGCTCAGAAAAGGCCTCCTaGAGGCAGGAACATCACCTG +
Preference number: 4 (lower is better)
Translates to: FLSHRAVTEQHSSEDIYCSEKAS*RQEHHL
Trigger: CAGGTGATGTTCCTGCCTCCAGGAGGCCTTTTCTGA...GCAGTAGATATCCTCACTGGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
3UTR CAA 72 bp CATGCTGACTTTCCAGTGATCCCAAATCGGGGACAATaGTCTGTCCAAGGTTTTCCAACACCAGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: HADFPVIPNRGQ*SVQGFPTPGWM
Trigger: CATCCAGCCTGGTGTTGGAAAACCTTGGACAGACAATTGTCCCCGATTTGGGATCACTGGAAAGTCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQITLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp GTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTACCCAGTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: VSRWVSEITIPACGMVTQYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...CTGGGTAACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSLQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATACTGTAAGGAAAAGATaGCCCTGGAACAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHTVRKR*PWNRSS
Trigger: GCTAGATCTGTTCCAGGGTCATCTTTTCCTTACAGT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACTGTAAGGAAAAGATaGCCCTGGAACAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMTVRKR*PWNRSS
Trigger: GCTAGATCTGTTCCAGGGTCATCTTTTCCTTACAGT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTACTGTAAGGAAAAGATaGCCCTGGAACAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGTVRKR*PWNRSS
Trigger: GCTAGATCTGTTCCAGGGTCATCTTTTCCTTACAGT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACCACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTTCCTGCAGACTCCTTaGCAAAAGGCACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYFLQTP*QKALPT
Trigger: GGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTTCCTGCAGACTCCTTaGCAAAAGGCACTCCCCACC +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDFLQTP*QKALPT
Trigger: GGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTCATGGGGCCTGTCTTaGACTCTGATTGCATCATTA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGSWGLS*TLIASL
Trigger: TAATGATGCAATCAGAGTTCAAGACAGGCCCCATGA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACCGTCTTGGCTGCGAATaGGAAAGAGTTTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHRLGCE*ERVSFS
Trigger: ACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACG...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCAGTATCTCAGGAGTaGAGAGAGGAACAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSAVSQE*REEQWH
Trigger: GTGCCACTGTTCCTCTCTTCACTCCTGAGATACTGC...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTTCCATGGTGTAGTACTAGAGAGGAAGTaGCACCCGCTTCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VCDFEDGESVVDVPFHGVVLERK*HPLPEA
Trigger: TGCTTCTGGAAGCGGGTGTCACTTCCTCTCTAGTAC...TACACCATGGAAGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAAAGGGAAGACTTTGGTaGCAGTTTATAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIKGRLW*QFIRWP
Trigger: AGGCCATCTTATAAACTGTCACCAAAGTCTTCCCTT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTAGACTTCATGGCAGGTaGTGGGCTCGAACCAAGCAG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCRLHGR*WARTKQ
Trigger: CTGCTTGGTTCGAGCCCATCACCTGCCATGAAGTCT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACAGCCAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCTTGGACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: TARIAIPCMMGCHAPMSWTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTACGTGAGTACATCGTaGTTCGTATTCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASYVSTS*FVFWSG
Trigger: GCCCGACCAGAATACGAAGCACGATGTACTCACGTA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGGATCTTGCTCTTTGTaGGTTTTGATACATCGGGAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIGSCSL*VLIHRE
Trigger: TTCCCGATGTATCAAAACGCACAAAGAGCAAGATCC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIHNEGT*CFCPCT
Trigger: TGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTG...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTATTTCTCCATCCCAGTaGAGTCAGACTTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIISPSQ*SQTSWG
Trigger: GCCCCATGAAGTCTGACTGCACTGGGATGGAGAAAT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGAAGCCACTTACAGATaGAGCCACCATTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASEATYR*SHHCLQ
Trigger: CTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTCTTCACAGGTCCACTaGCACACCCATCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASSSQVH*HTHQFP
Trigger: GGGAAATTGATGGGTGTGGCAGTGGACCTGTGAAGA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTCTTCACAGGTCCACTaGCACACCCATCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVSSQVH*HTHQFP
Trigger: GGGAAATTGATGGGTGTGGCAGTGGACCTGTGAAGA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680201.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIGVRYF*IGSVPL
Trigger: TAATGGAACAGACCCAATCCAGAAATACCTGACTCC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGCACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATTATGGCAGAGACTTTaGTGTGTTGATCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILWQRL*CVDHFG
Trigger: GCCAAAGTGATCAACACACCAAAGTCTCTGCCATAA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTAGAGAGACAGTGAAATaGGGTCCCGGATCCACTGGG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCRETVK*GPGSTG
Trigger: CCCAGTGGATCCGGGACCCCATTTCACTGTCTCTCT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGACACTGTGGATGGCATaGGGAAATGACCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVTLWMA*GNDPAS
Trigger: AGATGCAGGGTCATTTCCCCATGCCATCCACAGTGT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCCAAATCGGGGACAATTGTCTGTCCAAGGTTTTCCAACACCAGGCTGGATGGGGAGAGCAGGGTTGCATaGAAAAACAGGGTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: PKSGTIVCPRFSNTRLDGESRVA*KNRVSN
Trigger: ATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTC...CCCATCCAGCCTGGTGTTGGAAAACCTTGGACAGACAATTGTCCCCGATTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR CCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGTGGCACTCCCGTCTTaGCTCCATGACAATGATAAA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGVALPS*LHDNDK
Trigger: TTTATCATTGTCATGGAGCCAAGACGGGAGTGCCAC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGTGGCACTCCCGTCTTaGCTCCATGACAATGATAAA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYVALPS*LHDNDK
Trigger: TTTATCATTGTCATGGAGCCAAGACGGGAGTGCCAC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
3UTR CAA 72 bp GAAAAGCGACTTGTCCACAGAGGTCTGAGAGCAGGGTaGCATGGAAAAACAGGGTTTCTAATTCCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EKRLVHRGLRAG*HGKTGFLIPWS
Trigger: ACTCCAGGGAATTAGAAACCCTGTTTTTCCATGCAACCCTGCTCTCAGACCTCTGTGGACAAGTCGCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTATGCTGACTTTCCAGTaGTCCCAAATCGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIMLTFQ*SQIGDN
Trigger: ATTGTCCCCGATTTGGGATCACTGGAAAGTCAGCAT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
CDS-3UTR TCA 90 bp CACCACAGCCAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: HHSQNCYSLHDGLPCSNVVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...GACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATTCTGGTGGCTGGATTaGAGAAAGCATCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKFWWLD*RKHLYQ
Trigger: TTGATAGAGATGCTTTCTTCAATCCAGCCACCAGAA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: IEAEELSNEKLHDNDKSQLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...CTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQISFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQILQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATTGCTATTCCTTGCATaGTGGGCTGCCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSLLFLA*WAAMLQ
Trigger: TTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAA...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAAGCAGTCAACATTaGTTAGGCACGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASQSSQH*LGTEPP
Trigger: AGGAGGTTCCGTGCCTAATCAATGTTGACTGCTTTG...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGTCATTTTATTCCCTTaGGATCTGCAAAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIVILFP*DLQSSQ
Trigger: TTGACTGCTTTGCAGATCTCAAGGGAATAAAATGAC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAAAAGCCTCTAAAATCTaGGTTTTCCTTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRKASKI*VFLCCW
Trigger: CCAGCAGCAAAGGAAAACTCAGATTTTAGAGGCTTT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACAGGGCTGCTGCCTCTaGAGCCACTTACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGQGCCL*SHLQMQ
Trigger: CTGCATCTGTAAGTGGCTTCAGAGGCAGCAGCCCTG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATTTCAGCTCTGCTTATaGACTCTTCCCCTATTCCTA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKFQLCL*TLPLFL
Trigger: TAGGAATAGGGGAAGAGTTCATAAGCAGAGCTGAAA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATAAGCTTGTTGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HKLVGIEAEELSNEKLHDMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...GTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGCACCACAGCCAGAATTaGTATTCCTTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVHHSQN*YSLHDG
Trigger: CCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTG...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGGATCTTGCTCTTTGTaGGTTTTGATACATCGGGAA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKGSCSL*VLIHRE
Trigger: TTCCCGATGTATCAAAACGCACAAAGAGCAAGATCC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTTCTCTCTGGATCTTaGTCTTTGTGCGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSFLSGS*SLCVLI
Trigger: TATCAAAACGCACAAAGAGCAAGATCCAGAGAGAAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCTTTATTACTCTTAACTaGCTGATTGGCTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSFITLN*LIGSRG
Trigger: TCCTCTAGAGCCAATCAGGCAGTTAAGAGTAATAAA...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHADTAP*FSLSLQ
Trigger: TTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGC...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCCTACTTCAGTTAAGCTaGTCATACATTTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSLLQLS*SYIFTL
Trigger: GAGGGTAAAAATGTATGAGCAGCTTAACTGAAGTAG...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGCCGCCGCGGCTCGCTaGGGAATGATTGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWAAAAR*GMIELP
Trigger: GGGAAGTTCAATCATTCCGCAGCGAGCCGCGGCGGC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CATCTTAACAGTGTCAGATATTACATTTGGTGCCTTTCAATATGTAGAGGGTTTAGGCGGCTCCGAACTTaGCGCGAAGTTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HLNSVRYYIWCLSICRGFRRLRT*REVGGS
Trigger: GGAGCCCCCAACTTCGCGCCAAGTTCGGAGCCGCCT...AAACCCTCTACATATTGAAAGGCACCAAATGTAATATCTGACACTGTTAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTACCTGCATGTGGTATaGTTACCCAGGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVYLHVV*LPRSEY
Trigger: GTACTCTGACCTGGGTAACCATACCACATGCAGGTA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTATAGGTTGGCTCCTCTaGTGTTTAACAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIIGWLL*CLTASQ
Trigger: CTGGGATGCTGTTAAACACCAGAGGAGCCAACCTAT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTGSRIH*DNSKAY
Trigger: GTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGAACAAACACTGTGGATaGCATGGGGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVNKHCG*HGEMTL
Trigger: CAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATTTCCAACACCAGGCTaGATGGGAGGTGAGTATGAG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSFPTPG*MGGEYE
Trigger: CTCATACTCACCTCCCATCCAGCCTGGTGTTGGAAA...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423947.7
CDS-3UTR CCA 90 bp CGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATTGCTATTCCGTGGCACTCCCGTCTTaGCTCCATGACAATGATAAA +
Preference number: 4 (lower is better)
Translates to: RRESYDHGIGHHSQNCYSVALPS*LHDNDK
Trigger: TTTATCATTGTCATGGAGCCAAGACGGGAGTGCCAC...GGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAATGCTGACTTTCCAGTaGTCCCAAATCGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSMLTFQ*SQIGDN
Trigger: ATTGTCCCCGATTTGGGATCACTGGAAAGTCAGCAT...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000681156.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAAGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGAGTGTACCAAAGGCTaGGGACCGGTTTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYECTKG*GPVFQI
Trigger: GATCTGAAAAACCGGTCCTCAGCCTTTGGTACACTC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTATATGCTTCGAGGATaGGCCCATTCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIYMLRG*AHSLYR
Trigger: TCTGTACAGAGAATGGGCTCATCCTCGAAGCATATA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACCAAAGCCTATCACACTaGGGACACATTATGATCTTG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYQSLSH*GHIMIL
Trigger: CAAGATCATAATGTGTCCTCAGTGTGATAGGCTTTG...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTTCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTCATTTATCACTACGTaGGTACATCGTGCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHSFITT*VHRASY
Trigger: ATACGAAGCACGATGTACTCACGTAGTGATAAATGA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACTTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTACCCAGGCCCAATTAGATTCATaGTCCAGGGCAATAATACTT +
Preference number: 4 (lower is better)
Translates to: VSRWVSEITIPACGMVTQAQLDS*SRAIIL
Trigger: AAGTATTATTGCCCTGGATCATGAATCTAATTGGGC...CTGGGTAACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGCTCTTTGTGCGTTTTaGTACATCGGGAATTGCATA +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGALCAF*YIGNCI
Trigger: TATGCAATTCCCGATGTATCAAAACGCACAAAGAGC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGCTCTTTGTGCGTTTTaGTACATCGGGAATTGCATA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYALCAF*YIGNCI
Trigger: TATGCAATTCCCGATGTATCAAAACGCACAAAGAGC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGAACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATTACTCTTAACTGCCTaGTTGGCTCTAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSLLLTA*LALEEA
Trigger: AGCCTCCTCTAGAGCCAATCAGGCAGTTAAGAGTAA...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTCATGGGGCCTGTCTTaGACTCTGATTGCATCATTA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEISWGLS*TLIASL
Trigger: TAATGATGCAATCAGAGTTCAAGACAGGCCCCATGA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTTCCTTTTCTATGCTaGCATACATGGCGAGTAACT +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHFPFLC*HTWRVT
Trigger: AGTTACTCGCCATGTATGTCAGCATAGAAAAGGAAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCTTTCCTTTTCTATGCTaGCATACATGGCGAGTAACT +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSFPFLC*HTWRVT
Trigger: AGTTACTCGCCATGTATGTCAGCATAGAAAAGGAAA...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATAATTCGGTGAGTCCTTaGCGCTTCTTACCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDNSVSP*RFLPSY
Trigger: GTAGGAGGGTAAGAAGCGTCAAGGACTCACCGAATT...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR TCA 90 bp GATAAAAGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATATGCCTAGGCTGGTCTTaGACTCCTGGGCTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: DKSQLGCNHMPIVDVVFICLGWS*TPGLKG
Trigger: TCCCTTGAGCCCAGGAGTTCAAGACCAGCCTAGGCA...TATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGAAGGGAAGAAGGCCTaGGTCTCATTTCAAGATATT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHEGKKA*VSFQDI
Trigger: AATATCTTGAAATGAGACTCAGGCCTTCTTCCCTTC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp TTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: LSLQVSRGLTNKHCGWHGAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...CCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGATGGAGTGGGAAAGCTaGCTTGTAGATCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGMEWES*LVDPRV
Trigger: AACTCTGGGATCTACAAGGCAGCTTTCCCACTCCAT...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGCCACTCCTACAACTaGGGCCAGGAGAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGSHSYN*GQEKHL
Trigger: CAGATGCTTCTCCTGGCCGCAGTTGTAGGAGTGGCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTACTCCCATAAATACTaGAAAGACCAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGYSHKY*KDQGSK
Trigger: TTTGGAACCCTGGTCTTTGCAGTATTTATGGGAGTA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGTTCATACTCAAGTTCTaGCTGGCGTCGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQFILKF*LASLPK
Trigger: TTTTGGAAGCGACGCCAGGCAGAACTTGAGTATGAA...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGGAAATCACGATACCTaGATGTGGTATGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIGNHDT*MWYGYP
Trigger: TGGGTAACCATACCACATGCAGGTATCGTGATTTCC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATATATGCTTCAAAACCTTaGTATCTTCACTCCAACCTA +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIYASKP*YLHSNL
Trigger: TAGGTTGGAGTGAAGATAGCAAGGTTTTGAAGCATA...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCGGATTAGGACAAATATaGTTCAAAACCTTGCTATCT +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSGLGQI*FKTLLS
Trigger: AGATAGCAAGGTTTTGAAGCATATTTGTCCTAATCC...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCACAATGAGGGCACTTaGTGTTTCTGCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDHNEGT*CFCPCT
Trigger: TGTGCATGGGCAGAAACAGCAAGTGCCCTCATTGTG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GGGGCAAGACGTGCATGGCAAGACAGGAGTGCAGCAGGAAGTAATCTCCAGATAGTCTTGAACTCTGATTaGATCATTAACACGATCAAG +
Preference number: 4 (lower is better)
Translates to: GARRAWQDRSAAGSNLQIVLNSD*IINTIK
Trigger: CTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC...TATCTGGAGATTACTTCCTGCTGCACTCCTGTCTTGCCATGCACGTCTTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCTGCCTCTGAAGCCACTTACAGATGCAGCCACCATTGTCTGCAGACACAGCAGATATTACATTTGGTaGCTTTCAATATGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLPLKPLTDAATIVCRHSRYYIW*LSICRG
Trigger: CCCTCTACATATTGAAAGGCACCAAATGTAATATCT...GCTGTGTCTGCAGACAATGGTGGCTGCATCTGTAAGTGGCTTCAGAGGCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGCTTTTCTTTATCACTaGAAGTCAGCCGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVAFLYH*KSAVDS
Trigger: TGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYADTAP*FSLSLQ
Trigger: TTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGTATCTGGAACATCGATaGAGCATGGGAAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQYLEHR*SMGRSH
Trigger: GTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACTACTCAAGTTCTGCCTaGCGTCGCTTCCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LSNEKLHDNDKSQLGCNHYSSSA*RRFQNS
Trigger: GGAGTTTTGGAAGCGACGCCAGGCAGAACTTGAGTA...GTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTCGTGCTTCGTATTCTaGTCGGGCTTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCSCFVF*SGLFFL
Trigger: CAGGAAGAACAAGCCCGACCAGAATACGAAGCACGA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACGGAGTCAGGTATTTCTaGATTGGGTCTGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYGVRYF*IGSVPL
Trigger: TAATGGAACAGACCCAATCCAGAAATACCTGACTCC...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGGACGTGGCTGTCTGTaGAGTCAGGTATTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTGRGCL*SQVFLD
Trigger: ATCCAGAAATACCTGACTCCACAGACAGCCACGTCC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACATGCTCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: PMRSSMTMIKASLAAITCSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...GCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR CCA 90 bp GTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTTCCATGGTGTATCCCAACCAATAAACTaGGTCTCCTGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: VCDFEDGESVVDVPFHGVSQPIN*VSWIAY
Trigger: GTAGGCTATCCAGGAGACCCAGTTTATTGGTTGGGA...TACACCATGGAAGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATGTCTTGGGCTTTCTCTaGTACCAGGCGTCTAAACTG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYVLGFL*YQASKL
Trigger: CAGTTTAGACGCCTGGTACCAGAGAAAGCCCAAGAC...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATCACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGGGATTCTGATAGGTTaGCTCCTCTGGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIGILIG*LLWCLT
Trigger: TGTTAAACACCAGAGGAGCCAACCTATCAGAATCCC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GTCTTGAACTCTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGGGGTCCCGGATCCACTaGGACAATTCAAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: VLNSDCIINTIKRDSEMGGSRIH*DNSKAY
Trigger: GTAGGCTTTTGAATTGTCCCAGTGGATCCGGGACCC...CCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGAC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 72 bp TTGGCATACAGAAATAAGCCAATTCCTGCAGACTCCTaGACAAAAGGCACTCCCCACCCAATGACCACAATG +
Preference number: 4 (lower is better)
Translates to: LAYRNKPIPADS*TKGTPHPMTTM
Trigger: CATTGTGGTCATTGGGTGGGGAGTGCCTTTTGTCAAGGAGTCTGCAGGAATTGGCTTATTTCTGTATGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
3UTR CAA 72 bp TCCATCCCAGTGCAGTCAGACTTCATGGGGCCTGTCTaGAACTCTGATTGCATCATTAACACGATCAAGAGA +
Preference number: 4 (lower is better)
Translates to: SIPVQSDFMGPV*NSDCIINTIKR
Trigger: TCTCTTGATCGTGTTAATGATGCAATCAGAGTTCAAGACAGGCCCCATGAAGTCTGACTGCACTGGGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000681156.1
CDS-3UTR TCA 90 bp TTCTCAGTCACCGTGCAGTCACTGAACAACACTCCAGTGAGGATATCTACTGCTGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: FSVTVQSLNNTPVRISTAVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...AGCAGTAGATATCCTCACTGGAGTGTTGTTCAGTGACTGCACGGTGACTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550630.5
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGTTCGAAAATCATGCTaGCTTTCCAGTGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVVRKSC*LSSDPK
Trigger: TTTGGGATCACTGGAAAGTCAGCATGATTTTCGAAC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000681156.1
CDS-3UTR TCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATCTAACTGCAGGCCATaGCAGATAAGGTTAGATTCG +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSSNCRP*QIRLDS
Trigger: CGAATCTAACCTTATCTGTCATGGCCTGCAGTTAGA...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACGTTTCAGAGGCAATTTaGTGTGCATTATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHVSEAI*CALSQH
Trigger: ATGCTGAGATAATGCACATCAAATTGCCTCTGAAAC...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGTCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SQLGCNHMPIVDVVFILLSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...CAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTCTCAAATGGGGCAGTaGAAAACTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYSQMGQ*KTLALA
Trigger: AGCCAGAGCAAGAGTTTTTCACTGCCCCATTTGAGA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCTTCTGGTGGCTGGATTaGAGAAAGCATCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVFWWLD*RKHLYQ
Trigger: TTGATAGAGATGCTTTCTTCAATCCAGCCACCAGAA...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATTGCTATTCCACATTGTTTATCACTTaGTACTTGACCCGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RRESYDHGIGHHSQNCYSTLFIT*YLTRER
Trigger: CCTCTCTCGGGTCAAGTATCAAGTGATAAACAATGT...GGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACTGGGATCCTCTGACTaGCGGCGGAATTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLGSSD*RRNLQS
Trigger: TGATTGCAAATTCCGCCGTCAGTCAGAGGATCCCAG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGGCAGCTGGGATCCTCTaGCTGACGGCGGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWAAGIL*LTAEFA
Trigger: TGCAAATTCCGCCGTCAGTCAGAGGATCCCAGCTGC...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp CATAAGCTTGTTGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HKLVGIEAEELSNEKLHDPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...GTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp GATCATGTCCGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: DHVRRESYDHGIGHHSQNPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...ATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCGGACATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCCCACCAATATCAGGATaGCAAACTTCTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVPPISG*QTSLLH
Trigger: ATGGAGCAAAGAAGTTTGTCATCCTGATATTGGTGG...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEITEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATAAGCTTGTTGGCATCGAGGCTGAAGAGCTTTCCAATGAGAAGCTCCATGACACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: HKLVGIEAEELSNEKLHDTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...GTCATGGAGCTTCTCATTGGAAAGCTCTTCAGCCTCGATGCCAACAAGCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCACTGAGGACACATTATaGTCTTGCCACCAATATCAG +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSTEDTL*SCHQYQ
Trigger: CTGATATTGGTGGCAAGATCATAATGTGTCCTCAGT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACTTGCTGTTTCTGCCCATGCACACAGTTGTACCCCAATGGCTGTGTAGTGAGCGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: TCCFCPCTQLYPNGCVVSDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...GCTCACTACACAGCCATTGGGGTACAACTGTGTGCATGGGCAGAAACAGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGGATGCACAATTTCTTTaGGGACTCGCAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMDAQFL*GLASNI
Trigger: AATATTACTTGCGAGTCCTCAAAGAAATTGTGCATC...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTGCAGAAAATACAATaGACACCGAGAGCCTATAGA +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHLQKIQ*TPRAYR
Trigger: TCTATAGGCTCTCGGTGTTCATTGTATTTTCTGCAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GATCATGTCCGACGTGAAAGCTATGATCATGGCATTGGTCACCACAGCCAGAATAGAACATCTTCATGGTaGGGCTGTTCTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: DHVRRESYDHGIGHHSQNRTSSW*GCSHNQ
Trigger: CTGATTATGAGAACAGCCTCACCATGAAGATGTTCT...ATTCTGGCTGTGGTGACCAATGCCATGATCATAGCTTTCACGTCGGACATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTGCTATGTAGAAGCATaGAGAGTAGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGCYVEA*RVVVDK
Trigger: TTTGTCAACTACTACTCTTCATGCTTCTACATAGCA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCTATGTAGAAGCATaGAGAGTAGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: HCKSAVDSLTNTVDGMGKCYVEA*RVVVDK
Trigger: TTTGTCAACTACTACTCTTCATGCTTCTACATAGCA...TTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATATGATTATTGTCAGCTaGGTTGTCAGTTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHMIIVS*VVSSRR
Trigger: TCTTCTTGAACTGACAACTCAGCTGACAATAATCAT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTTGCTTTTCCTCCCATaGTTATTGTCAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASLLFLP*LLSAEL
Trigger: CAACTCAGCTGACAATAATCATGGGAGGAAAAGCAA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGATCCAGAAACTCTGTaGAATCGCCCAATTAGATTC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVDPETL*NRPIRF
Trigger: GAATCTAATTGGGCGATTTCACAGAGTTTCTGGATC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACAGCCAGAATTGCTATTCCTTGCATGATGGGCTGCCATGCTCCAATGTCTTGGTGGGGTTATCTTTTCTaGTCCAGAAACTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: TARIAIPCMMGCHAPMSWWGYLF*SRNSVK
Trigger: TTTCACAGAGTTTCTGGATCAGAAAAGATAACCCCA...CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTGGAGAGAGTGTTGTTaGTGTACCCTTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYWRECC*CTLPWC
Trigger: ACACCATGGAAGGGTACATCAACAACACTCTCTCCA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACACAGATCTAGCCAAGTaGAGAAATGAAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYTDLAK*RNETWL
Trigger: AAGCCATGTTTCATTTCTTCACTTGGCTAGATCTGT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCACAAAGGCAGCTGGTaGTGTGTAATACTGCACCTT +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDHKGSW*CVILHL
Trigger: AAGGTGCAGTATTACACATCACCAGCTGCCTTTGTG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGAGACTTTGGTGTGTTaGTCACTTTGGCATACAGAA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVETLVC*SLWHTE
Trigger: TTCTGTATGCCAAAGTGATCAACACACCAAAGTCTC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGAGACTTTGGTGTGTTaGTCACTTTGGCATACAGAA +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIETLVC*SLWHTE
Trigger: TTCTGTATGCCAAAGTGATCAACACACCAAAGTCTC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTTTACTCTTAACTGCCTaGTTGGCTCTAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTLLLTA*LALEEA
Trigger: AGCCTCCTCTAGAGCCAATCAGGCAGTTAAGAGTAA...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAAGCGCCCAGGAGGCCTaGCACTTACAAGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGSAQEA*HLQGNK
Trigger: TTTATTGCCTTGTAAGTGTCAGGCCTCCTGGGCGCT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAAAGCCTCTAAAATCTaGGTTTTCCTTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASKASKI*VFLCCW
Trigger: CCAGCAGCAAAGGAAAACTCAGATTTTAGAGGCTTT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCAAAGCCTCTAAAATCTaGGTTTTCCTTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSKASKI*VFLCCW
Trigger: CCAGCAGCAAAGGAAAACTCAGATTTTAGAGGCTTT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTCCTACAATACTGCTTTaGTGGATCCTACATAATTAC +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGPTILL*WILHNY
Trigger: GTAATTATGTAGGATCCATCAAAGCAGTATTGTAGG...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp AAATCACCTCCCTCTTGTGCACCCAGCAATGACCTGTTACCAGTAGGGGTGAGACCTACAATACTGCTTTaGTGGATCCTACATAATTAC +
Preference number: 4 (lower is better)
Translates to: KSPPSCAPSNDLLPVGVRPTILL*WILHNY
Trigger: GTAATTATGTAGGATCCATCAAAGCAGTATTGTAGG...TCTCACCCCTACTGGTAACAGGTCATTGCTGGGTGCACAAGAGGGAGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAGATCAAGAGAGACAGTaGAATGGGGTCCCGGATCCA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGDQERQ*NGVPDP
Trigger: TGGATCCGGGACCCCATTTCACTGTCTCTCTTGATC...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCGTCTTGGCTGCGAATaGGAAAGAGTTTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTRLGCE*ERVSFS
Trigger: ACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTTTCCTTTTCTATGCTaGCATACATGGCGAGTAACT +
Preference number: 4 (lower is better)
Translates to: CRHSSMLFFITASQPWTHFPFLC*HTWRVT
Trigger: AGTTACTCGCCATGTATGTCAGCATAGAAAAGGAAA...GTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp TTGTTTTTGAAGTCTGCGACTTTGAAGATGGAGAGAGTGTTGTTGATGTACCCTGATGGCATGGGGAAATaGCCCTGCATCTCCACTACA +
Preference number: 4 (lower is better)
Translates to: LFLKSATLKMERVLLMYPDGMGK*PCISTT
Trigger: TGTAGTGGAGATGCAGGGTCATTTCCCCATGCCATC...AGGGTACATCAACAACACTCTCTCCATCTTCAAAGTCGCAGACTTCAAAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR TCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAGGGAAGACTTTGGTaGCAGTTTATAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVKGRLW*QFIRWP
Trigger: AGGCCATCTTATAAACTGTCACCAAAGTCTTCCCTT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTAAGGGAAGACTTTGGTaGCAGTTTATAAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASKGRLW*QFIRWP
Trigger: AGGCCATCTTATAAACTGTCACCAAAGTCTTCCCTT...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR TCA 90 bp ATATTAATGAGCCAAACAATGCTACTCTATCTTGAGCACATGAAACAATGCTGGAGGCGGAGGTTGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: ILMSQTMLLYLEHMKQCWRRRLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCAACCTCCGCCT...CCAGCATTGTTTCATGTGCTCAAGATAGAGTAGCATTGTTTGGCTCATTAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425752.6
CDS-3UTR TCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGAATGGACAATTCGGTaGGTCCTTGACGCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTEWTIR*VLDASY
Trigger: GTAAGAAGCGTCAAGGACTCACCGAATTGTCCATTC...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441606.2
ENST00000679426.1
CDS-3UTR TCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGTCACACAGCCATGCATaGACAGCATTTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGSHSHA*TAFGRK
Trigger: CTTTCTTCCAAATGCTGTTCATGCATGGCTGTGTGA...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp ACCAGGCGTCTAAACTGGGTGGTCAGTTTCCATGCGTCCACTAGTTGCCCTTTTAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: TRRLNWVVSFHASTSCPFRGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...AAAAGGGCAACTAGTGGACGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680371.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATAGAGGCAATTTGATGTaGATTATCTCAGCATACGTA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHRGNLM*IISAYV
Trigger: TACGTATGCTGAGATAATGCACATCAAATTGCCTCT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEIAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TATCTGGAACATCGATGCAGCATGGGAAGAAGTCACACAGCCATGCATGAACAGGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: YLEHRCSMGRSHTAMHEQAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...CTGTTCATGCATGGCTGTGTGACTTCTTCCCATGCTGCATCGATGTTCCAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGCAGTGAAAAACTCTTaGTCTGGCTTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVAVKNS*SGLMML
Trigger: AAGCATCATCAAGCCAGAGCAAGAGTTTTTCACTGC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATACTGACGGCGGAATTTaGAATCATGGAGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYTDGGI*NHGVGK
Trigger: CTTTCCCACTCCATGATTGCAAATTCCGCCGTCAGT...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGCTGCTTTTTGTATATaGTTCGAGGATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVAAFCI*FEDEPI
Trigger: AATGGGCTCATCCTCGAAGCATATACAAAAAGCAGC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTACCCAGATAAGATCCAAGGGCTaGTTTTTGTATATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: VSRWVSEITIPACGMVTQIRSKG*FLYMLR
Trigger: TCGAAGCATATACAAAAAGCAGCCCTTGGATCTTAT...CTGGGTAACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR GCA 90 bp CTGGGGGTGTCCAGGTGGGTATCGGAAATCACGATACCTGCATGTGGTATGGTTGATGACAAACTTCTTTaGTCCATGTACAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: LGVSRWVSEITIPACGMVDDKLL*SMYSYL
Trigger: AAGATAACTGTACATGGAGCAAAGAAGTTTGTCATC...AACCATACCACATGCAGGTATCGTGATTTCCGATACCCACCTGGACACCCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR GCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTTTCCAATGAGAAGCTCCATGACAATGATAAAAGCCAGCTTGGCTGCAATCACCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: LSNEKLHDNDKSQLGCNHRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...GTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCTTCTCATTGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679761.1
CDS-3UTR GCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTCGGGCTTGTTCTTCCTaGTGTAACTCAACAGTATCC +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTRACSS*CNSTVS
Trigger: GGATACTGTTGAGTTACAGCAGGAAGAACAAGCCCG...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACCTTGCATGATGGGCTaGCATGCTCCAATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGPCMMG*HAPMSW
Trigger: CCAAGACATTGGAGCATGGCAGCCCATCATGCAAGG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAGAATTGCTATTCCTTaGATGATGGGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSRIAIP*MMGCHA
Trigger: AGCATGGCAGCCCATCATGCAAGGAATAGCAATTCT...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCAAAAGCCAGCTTGGCTaGAATCACATGCCAATAGTA +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSKSQLG*NHMPIV
Trigger: TACTATTGGCATGTGATTGCAGCCAAGCTGGCTTTT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTGGATCTTGCTCTTTGTaGGTTTTGATACATCGGGAA +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASGSCSL*VLIHRE
Trigger: TTCCCGATGTATCAAAACGCACAAAGAGCAAGATCC...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CACACAGTTGTACCCCAATGGCTGTGTAGTGAGCCATTCACAAAGGCAGCTGGTTATTCCCTTGAGATCTaGAAAGCAGTCAACATTGAT +
Preference number: 4 (lower is better)
Translates to: HTVVPQWLCSEPFTKAAGYSLEI*KAVNID
Trigger: ATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATA...ACCAGCTGCCTTTGTGAATGGCTCACTACACAGCCATTGGGGTACAACTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATTTTATTACTCTTAACTaGCTGATTGGCTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHFITLN*LIGSRG
Trigger: TCCTCTAGAGCCAATCAGGCAGTTAAGAGTAATAAA...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGATTTCTCCATCCCAGTaGAGTCAGACTTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWISPSQ*SQTSWG
Trigger: GCCCCATGAAGTCTGACTGCACTGGGATGGAGAAAT...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVADTAP*FSLSLQ
Trigger: TTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGC...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCGCAGACACAGCTCCATaGTTTTCTTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVADTAP*FSLSLQ
Trigger: TTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGC...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp AGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTACTTCAGTTAAGCTaGTCATACATTTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: SRGLTNKHCGWHGEMTLHLLQLS*SYIFTL
Trigger: GAGGGTAAAAATGTATGAGCAGCTTAACTGAAGTAG...ATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR GCA 90 bp CTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTGGATGGCATGGGGAAATGCTACTTCAGTTAAGCTaGTCATACATTTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: LQVSRGLTNKHCGWHGEMLLQLS*SYIFTL
Trigger: GAGGGTAAAAATGTATGAGCAGCTTAACTGAAGTAG...CATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000320560.13
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACAAGAAGTGTTTCAACAAGAGTACATTCTGACCCCCATTGTGAATTAATGTTTAACTTGGCGCGAAGTTaGGGGCTCCCGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TRSVSTRVHSDPHCELMFNLARS*GLPGSR
Trigger: TCTGGAACCCGGGAGCCCCCAACTTCGCGCCAAGTT...AAACATTAATTCACAATGGGGGTCAGAATGTACTCTTGTTGAAACACTTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320560.13
ENST00000680498.1
ENST00000681156.1
CDS-3UTR CCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGGCGGCTTCTGGTGGCTaGATTGAAGAAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWAASGG*IEESIS
Trigger: AGAGATGCTTTCTTCAATCCAGCCACCAGAAGCCGC...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: AATIVCRHSSMLFFITASFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...ACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGTTTGCAATCATGGAGTaGGAAAGCTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVFAIME*ESCLVD
Trigger: ATCTACAAGGCAGCTTTCCCACTCCATGATTGCAAA...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGCGGAATTTGCAATCATaGAGTGGGAAAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SQLGCNHMPIVDVVFILLRNLQS*SGKAAL
Trigger: CAAGGCAGCTTTCCCACTCCATGATTGCAAATTCCG...CAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp CTCACTAACAAACACTGTGGATGGCATGGGGAAATGACCCTGCATCTCCACTACATTGAGTTTCCAGAATaGACAAAGCCTATCACACTG +
Preference number: 4 (lower is better)
Translates to: LTNKHCGWHGEMTLHLHYIEFPE*TKPITL
Trigger: CAGTGTGATAGGCTTTGTCCATTCTGGAAACTCAAT...GTAGTGGAGATGCAGGGTCATTTCCCCATGCCATCCACAGTGTTTGTTAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp AGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAAGAAAAAGACAGCACTaGCACAGAGGGTTATCCGTA +
Preference number: 4 (lower is better)
Translates to: SHHCLQTQLHAFLYHCKSRKRQH*HRGLSV
Trigger: TACGGATAACCCTCTGTGCCAGTGCTGTCTTTTTCT...TGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGATTGCATCATTAACACGATCAAGAGAGACAGTGAAATGGGGTCCCGGATCCATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: LIASLTRSRETVKWGPGSISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...GGATCCGGGACCCCATTTCACTGTCTCTCTTGATCGTGTTAATGATGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCCACCATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCATCAGTCTGGGTCCTTaGGAGTTCGAAGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: QPPLSADTAPCFSLSLQVISLGP*EFEVSN
Trigger: ATTACTAACTTCGAACTCCCAAGGACCCAGACTGAT...GACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CATTGTCTGCAGACACAGCTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGATAAACTGGGTCTCCTaGATAGCCTACAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: HCLQTQLHAFLYHCKSAVINWVS*IAYKFA
Trigger: GGCAAATTTGTAGGCTATCCAGGAGACCCAGTTTAT...CACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAGCTGTGTCTGCAGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CAGCTTGGCTGCAATCACATGCCAATAGTAGATGTTGTGTTTATACTCCTGGGGAAGAAGACAGCCACCTaGGTCACACTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: QLGCNHMPIVDVVFILLGKKTAT*VTLFIS
Trigger: AGAAATGAAGAGTGTGACCCAGGTGGCTGTCTTCTT...CCCCAGGAGTATAAACACAACATCTACTATTGGCATGTGATTGCAGCCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679761.1
ENST00000680371.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGAACCAGGCGTCTAAACTaGGTGGTCAGTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGTRRLN*VVSFHA
Trigger: CGCATGGAAACTGACCACCCAGTTTAGACGCCTGGT...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TCTAGTACAATCAGACAGTTACATCAAATTACTGGGCCCAGAGTAACAGGATGGCACGATACCTGCATGTaGTATGGTTACCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSTIRQLHQITGPRVTGWHDTCM*YGYPGQ
Trigger: CTGACCTGGGTAACCATACCACATGCAGGTATCGTG...CCATCCTGTTACTCTGGGCCCAGTAATTTGATGTAACTGTCTGATTGTACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp TGTCATTTTATTCCCTTGAGATCTGCAAAGCAGTCAACATTGATTAGGCACGGACTGGGGGTGTCCAGGTaGGTATCGGAAATCACGATA +
Preference number: 4 (lower is better)
Translates to: CHFIPLRSAKQSTLIRHGLGVSR*VSEITI
Trigger: TATCGTGATTTCCGATACCCACCTGGACACCCCCAG...TCCGTGCCTAATCAATGTTGACTGCTTTGCAGATCTCAAGGGAATAAAATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680201.1
ENST00000681817.1
CDS-3UTR CCA 90 bp ACCCTGCATCTCCACTACAACTTTGCTCTTTTGGGCATCTTAACAGTGTCAGATTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: TLHLHYNFALLGILTVSDLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...ATCTGACACTGTTAAGATGCCCAAAAGAGCAAAGTTGTAGTGGAGATGCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTGTCCACAGCAGCACATTTAATCTATGAAGAGGATTTTCTCTGCTGGGGCTATTTGTGTTTATACTCCTaGGGGTGTCCAGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSTAAHLIYEEDFLCWGYLCLYS*GCPGGY
Trigger: ATACCCACCTGGACACCCCCAGGAGTATAAACACAA...ATAGCCCCAGCAGAGAAAATCCTCTTCATAGATTAAATGTGCTGCTGTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000680371.1
ENST00000680498.1
ENST00000681156.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CTCCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: LHAFLYHCKSAVDSLTNTTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...AGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp CCATGCTTTTCTTTATCACTGCAAGTCAGCCGTGGACTCACTAACAAACACTGTACAGTTGTACCCCAATaGCTGTGTAGTGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: PCFSLSLQVSRGLTNKHCTVVPQ*LCSEPF
Trigger: GAATGGCTCACTACACAGCCATTGGGGTACAACTGT...ACAGTGTTTGTTAGTGAGTCCACGGCTGACTTGCAGTGATAAAGAAAAGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320560.13
ENST00000423947.7
ENST00000441606.2
ENST00000679426.1
ENST00000681817.1
CDS-3UTR CCA 90 bp GCACTCCCGTCTTGGCTGCGAATGAGAAAGAGTTTCCTTCAGTGGGAAGAAATTTTATGGCAGAGACTTTaGTGTGTTGATCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: ALPSWLRMRKSFLQWEEILWQRL*CVDHFG
Trigger: GCCAAAGTGATCAACACACCAAAGTCTCTGCCATAA...AATTTCTTCCCACTGAAGGAAACTCTTTCTCATTCGCAGCCAAGACGGGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts: