RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANO3 (Homo sapiens)

Ensembl gene IDs: ENSG00000134343

Ensembl transcript IDs: ENST00000256737.8, ENST00000525139.5, ENST00000529242.1, ENST00000531568.1, ENST00000531646.1, ENST00000531798.1, ENST00000672621.1

Found 533 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTTCCTTTCCAACCTCCATAGCTTATGCCTCCTCTGAACTTTCTTaGGTGCCCCATCACTCCTGCCTCATCTGTCTGTGGAACAGACAT +
Preference number: 1 (lower is better)
Translates to: SSFPTSIAYASSELS*VPHHSCLICLWNRH
Trigger: ATGTCTGTTCCACAGACAGATGAGGCAGGAGTGATGGGGCACTCAAGAAAGTTCAGAGGAGGCATAAGCTATGGAGGTTGGAAAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR GCA 90 bp ATATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTaGAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTT +
Preference number: 1 (lower is better)
Translates to: IYLPETGSENYILAS*NVNLTLFKVVKSLF
Trigger: AAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR GCA 90 bp TGTCAGAGCTGCATAAACCACAATGTATACTACGTACTGTCAAGGTaGAAAGGGACAAGGAAAACCAACGTATTTACAGCATTTCAAGTT +
Preference number: 1 (lower is better)
Translates to: CQSCINHNVYYVLSR*KGTRKTNVFTAFQV
Trigger: AACTTGAAATGCTGTAAATACGTTGGTTTTCCTTGTCCCTTTGCACCTTGACAGTACGTAGTATACATTGTGGTTTATGCAGCTCTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR GCA 90 bp TTCCATCATACAATAGATTGTGCTAAGGATCATTTTGGAAGAATGTaGAGCATTCAGAAGTTGTATCTCATCATGCAGTCACTCAGCAGC +
Preference number: 1 (lower is better)
Translates to: FHHTIDCAKDHFGRM*SIQKLYLIMQSLSS
Trigger: GCTGCTGAGTGACTGCATGATGAGATACAACTTCTGAATGCTGCACATTCTTCCAAAATGATCCTTAGCACAATCTATTGTATGATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR CCA 90 bp ACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTaGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTA +
Preference number: 1 (lower is better)
Translates to: TLFKVVKSLFSSLQV*IFQIPEMAVIHFQV
Trigger: TACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR GCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATGTGGTTTGCCAAGTATaGCTTCCTCCTAGATTTCAC +
Preference number: 2 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYVVCQV*LPPRFH
Trigger: GTGAAATCTAGGAGGAAGGCATACTTGGCAAACCAC...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR TCA 90 bp GACAAATGTTGCTGTTCTGTGGCCCTAATTTGGAAAAGATGTTGGTTGATGTTATCCTCTGAACTTTCTTaGGTGCCCCATCACTCCTGC +
Preference number: 2 (lower is better)
Translates to: DKCCCSVALIWKRCWLMLSSELS*VPHHSC
Trigger: GCAGGAGTGATGGGGCACTCAAGAAAGTTCAGAGGA...TAACATCAACCAACATCTTTTCCAAATTAGGGCCACAGAACAGCAACATTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR-3UTR GCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTATTATACATGTGGTTTaGCAAGTATGCCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSIIHVV*QVCLPP
Trigger: AGGAGGAAGGCATACTTGGCAAACCACATGTATAAT...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR TCA 90 bp CATGATATTTTAAGCCATGCCTGGCTTGTGCACATTTACATGGAAATCTGTCTTCCATTACACTGCAGTTaGTGGAAGGCAGAGTTCTCC +
Preference number: 2 (lower is better)
Translates to: HDILSHAWLVHIYMEICLPLHCS*WKAEFS
Trigger: GGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGG...AAGACAGATTTCCATGTAAATGTGCACAAGCCAGGCATGGCTTAAAATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR-3UTR GCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATTATACATGTGGTTTaGCAAGTATGCCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYIIHVV*QVCLPP
Trigger: AGGAGGAAGGCATACTTGGCAAACCACATGTATAAT...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR GCA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGATACATCCTGGCTTCCTaGAATGTCAATCTAACCCTT +
Preference number: 2 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRYILAS*NVNLTL
Trigger: AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTA...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR CCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTAGCATATTATACATGTaGTTTGCCAAGTATGCCTTC +
Preference number: 2 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSSILYM*FAKYAF
Trigger: GAAGGCATACTTGGCAAACCACATGTATAATATGCT...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR GCA 90 bp CTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTACCTAGCATTCAAAGTTaGCATCATTTCTTCCCATTA +
Preference number: 2 (lower is better)
Translates to: LPETGSENYILASCNVNLPSIQS*HHFFPL
Trigger: TAATGGGAAGAAATGATGGCAACTTTGAATGCTAGG...TAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR GCA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGCCTAGCATTCAAAGTTaGCATCATTTCTTCCCATTA +
Preference number: 2 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPEPSIQS*HHFFPL
Trigger: TAATGGGAAGAAATGATGGCAACTTTGAATGCTAGG...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR CCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATAGCATATTATACATGTaGTTTGCCAAGTATGCCTTC +
Preference number: 2 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYSILYM*FAKYAF
Trigger: GAAGGCATACTTGGCAAACCACATGTATAATATGCT...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR CCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCCTGAGAATTACATCCTaGCTTCCTGCAATGTCAATC +
Preference number: 2 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCLRITS*LPAMSI
Trigger: GATTGACATTGCAGGAAGCCAGGATGTAATTCTCAG...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR TCA 90 bp GAAAGCTCTTCAGCTTGGAACAACTTGTCAAGGCAGACTGCATGCACATATATAAACCTCTCTGGAATCTaGATGGAAGAGTTTCACATA +
Preference number: 2 (lower is better)
Translates to: ESSSAWNNLSRQTACTYINLSGI*MEEFHI
Trigger: TATGTGAAACTCTTCCATTCAGATTCCAGAGAGGTT...TATATATGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR-3UTR CCA 90 bp AGCATATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATAGCATATTATACATGTaGTTTGCCAAGTATGCCTTC +
Preference number: 2 (lower is better)
Translates to: SIYLPETGSENYILASCNSILYM*FAKYAF
Trigger: GAAGGCATACTTGGCAAACCACATGTATAATATGCT...ATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR CAA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATaGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATG +
Preference number: 2 (lower is better)
Translates to: ASCNVNLTLFKVVKS*FSSLQVWIFQIPEM
Trigger: CATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR GCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCCCTAGCATTCAAAGTTaGCATCATTTCTTCCCATTA +
Preference number: 2 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCPSIQS*HHFFPL
Trigger: TAATGGGAAGAAATGATGGCAACTTTGAATGCTAGG...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR GCA 90 bp CTGTGGAACAGACATACTCATAGATACAGAGTTGACGTTGAAATAGAAATTCCATACATCCTGGCTTCCTaGAATGTCAATCTAACCCTT +
Preference number: 2 (lower is better)
Translates to: LWNRHTHRYRVDVEIEIPYILAS*NVNLTL
Trigger: AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTA...TGGAATTTCTATTTCAACGTCAACTCTGTATCTATGAGTATGTCTGTTCCACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR-3UTR GCA 90 bp GACAAATGTTGCTGTTCTGTGGCCCTAATTTGGAAAAGATGTTGGTTGATGTTAGTGCAACTCTTCAACTaGATAGTCAATGTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: DKCCCSVALIWKRCWLMLVQLFN*IVNVKQ
Trigger: CTGCTTTACATTGACTATGCAGTTGAAGAGTTGCAC...TAACATCAACCAACATCTTTTCCAAATTAGGGCCACAGAACAGCAACATTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR CAA 90 bp GACAAATGTTGCTGTTCTGTGGCCCTAATTTGGAAAAGATGTTGGTaGATGTTATTATTAGGTAGAGAGAGTATTTATACTCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: DKCCCSVALIWKRCW*MLLLGRESIYTQAG
Trigger: ACCTGCCTGAGTATAAATACTCTCTCTACCTAATAATAACATCAACCAACATCTTTTCCAAATTAGGGCCACAGAACAGCAACATTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR-3UTR GCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTCCTAGCATTCAAAGTTaGCATCATTTCTTCCCATTA +
Preference number: 2 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGPSIQS*HHFFPL
Trigger: TAATGGGAAGAAATGATGGCAACTTTGAATGCTAGG...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR GCA 90 bp CTGTGGAACAGACATACTCATAGATACAGAGTTGACGTTGAAATAGAAATTCCAGTGCAACTCTTCAACTaGATAGTCAATGTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: LWNRHTHRYRVDVEIEIPVQLFN*IVNVKQ
Trigger: CTGCTTTACATTGACTATGCAGTTGAAGAGTTGCAC...TGGAATTTCTATTTCAACGTCAACTCTGTATCTATGAGTATGTCTGTTCCACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR-3UTR CCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCAGCATATTATACATGTaGTTTGCCAAGTATGCCTTC +
Preference number: 2 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSSILYM*FAKYAF
Trigger: GAAGGCATACTTGGCAAACCACATGTATAATATGCT...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR CCA 90 bp GACAAATGTTGCTGTTCTGTGGCCCTAATTTGGAAAAGATGTTGGTTGATGTTATACAATAGCAAAAACTaGTGTCAGAGCTGCATAAAC +
Preference number: 2 (lower is better)
Translates to: DKCCCSVALIWKRCWLMLYNSKN*CQSCIN
Trigger: GTTTATGCAGCTCTGACACCAGTTTTTGCTATTGTA...TAACATCAACCAACATCTTTTCCAAATTAGGGCCACAGAACAGCAACATTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR TCA 72 bp GCAAGAGACATGGGCAATTCCTACCAACCTGTAAACTaGAGGGATGTAGAGTTCTGGCAGCCAAGGCAAGGA +
Preference number: 3 (lower is better)
Translates to: ARDMGNSYQPVN*RDVEFWQPRQG
Trigger: TCCTTGCCTTGGCTGCCAGAACTCTACATCCCTTCAGTTTACAGGTTGGTAGGAATTGCCCATGTCTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR-3UTR CAA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGATATTATACATGTGGTTaGCCAAGTATGCCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRYYTCG*PSMPSS
Trigger: GGAGGAAGGCATACTTGGCAAACCACATGTATAATA...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR CAA 90 bp ATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGAGAATTAAGGTCGTCAAGTCATaGTTTTCTTCCCTACAAGTC +
Preference number: 3 (lower is better)
Translates to: MEGRVLQAYISLRLVLRIKVVKS*FSSLQV
Trigger: GACTTGTAGGGAAGAAAACAATGACTTGACGACCTT...AATTCTCAGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR CAA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCTATTATACATGTGGTTaGCCAAGTATGCCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCYYTCG*PSMPSS
Trigger: GGAGGAAGGCATACTTGGCAAACCACATGTATAATA...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR CAA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCATATTATACATGTGGTTaGCCAAGTATGCCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPYYTCG*PSMPSS
Trigger: GGAGGAAGGCATACTTGGCAAACCACATGTATAATA...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
3UTR-3UTR CAA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTATTATACATGTGGTTaGCCAAGTATGCCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSYYTCG*PSMPSS
Trigger: GGAGGAAGGCATACTTGGCAAACCACATGTATAATA...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
3UTR GCA 72 bp TGCATAAACCACAATGTATACTACGTACTGTCAAGGTaGAAAGGGACAAGGAAAACCAACGTATTTACAGCA +
Preference number: 3 (lower is better)
Translates to: CINHNVYYVLSR*KGTRKTNVFTA
Trigger: TGCTGTAAATACGTTGGTTTTCCTTGTCCCTTTGCACCTTGACAGTACGTAGTATACATTGTGGTTTATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR TCA 72 bp GAATGCTGTTCTTTTTGGAATCTTAGATTTTTGGTTTaGCTACTAAAGGTGATGTGCAACTCTTCAACTGCA +
Preference number: 3 (lower is better)
Translates to: ECCSFWNLRFLV*LLKVMCNSSTA
Trigger: TGCAGTTGAAGAGTTGCACATCACCTTTAGTAGTCAAACCAAAAATCTAAGATTCCAAAAAGAACAGCATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
3UTR GCA 72 bp TCTTCAGCTTGGAACAACTTGTCAAGGCAGACTGCATaGACATATATATTAGTTATTTGCTTGAAAAGACAA +
Preference number: 3 (lower is better)
Translates to: SSAWNNLSRQTA*TYILVICLKRQ
Trigger: TTGTCTTTTCAAGCAAATAACTAATATATATGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATGCCGGCTTAGGGAGCTaGCCGAGAGGGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYAGLGS*PRGRRR
Trigger: CCTCCGCCTCCCTCTCGGGCAGCTCCCTAAGCCGGC...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256737.8
CDS-3UTR GCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCACCTCAGCGAGCGCACTaGAATCCGACACCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPPQRAH*NPTPAV
Trigger: TACAGCAGGTGTCGGATTGCAGTGCGCTCGCTGAGG...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256737.8
CDS-3UTR CCA 90 bp CTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGTCAGTTGCTCGGGCTaGCAAAGGCCTCCGCCATTG +
Preference number: 4 (lower is better)
Translates to: LTTLFPITLQLMEGRVLQVSCSG*QRPPPL
Trigger: CAATGGCGGAGGCCTTTGCCAGCCCGAGCAACTGAC...TTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATAGTCAGTTGCTCGGGCTaGCAAAGGCCTCCGCCATTG +
Preference number: 4 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSIVSCSG*QRPPPL
Trigger: CAATGGCGGAGGCCTTTGCCAGCCCGAGCAACTGAC...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCATCATCCATCAGTCCATaGAGGTTCATGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPSSISP*RFMGCR
Trigger: TCTGCAGCCCATGAACCTTCATGGACTGATGGATGA...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATCTGCAATCCGACACCTaGTGTAGCCGGCACTTCGCT +
Preference number: 4 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYLQSDT*CSRHFA
Trigger: AGCGAAGTGCCGGCTACAGCAGGTGTCGGATTGCAG...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256737.8
CDS-3UTR GCA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGGAAGTGGTGAATCCGTaGACGGCTGAAGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPEEVVNP*TAEGAS
Trigger: ACTGGCCCCTTCAGCCGTGCACGGATTCACCACTTC...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAATGGAGCCTGAATGGTaGACCATTTTCACTCTGCGC +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPMEPEW*TIFTLR
Trigger: GCGCAGAGTGAAAATGGTCCACCATTCAGGCTCCAT...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256737.8
CDS-3UTR TCA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGAGAATCCGTGCACGGCTaGAGGGGCCAGTATAGCAGT +
Preference number: 4 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRESVHG*RGQYSS
Trigger: ACTGCTATACTGGCCCCTTCAGCCGTGCACGGATTC...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTAGATACAGCTGTCGTTaGGTCTCTGCAGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSRYSCR*VSAGSS
Trigger: ACTGCTCCCTGCAGAGACTCAACGACAGCTGTATCT...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATCCTCTGAACTTTCTTaGGTGCCCCATCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSISSELS*VPHHSC
Trigger: GCAGGAGTGATGGGGCACTCAAGAAAGTTCAGAGGA...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp CTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAACTGTCGTTGAGTCTCTaGAGGGAGCAGTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LTTLFPITLQLMEGRVLQLSLSL*REQFLS
Trigger: TGACAAGAACTGCTCCCTGCAGAGACTCAACGACAG...TTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGATACCTATGTCAGTTaGTCGGGCTGGCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSDTYVS*SGWQRP
Trigger: AGGCCTTTGCCAGCCCGAGCAACTGACATAGGTATC...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAACTGAACTTTCTTGAGTaGCCCATCACTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LTTLFPITLQLMEGRVLQLNFLE*PITPAS
Trigger: TGAGGCAGGAGTGATGGGGCACTCAAGAAAGTTCAG...TTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp CTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGGGGCTTGCAATAGCTaGCTCCTTCTCCAACATCAA +
Preference number: 4 (lower is better)
Translates to: LTTLFPITLQLMEGRVLQGACNS*LLLQHQ
Trigger: TTGATGTTGGAGAAGGAGCCAGCTATTGCAAGCCCC...TTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCGTCAGTTGCTCGGGCTaGCAAAGGCCTCCGCCATTG +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCVSCSG*QRPPPL
Trigger: CAATGGCGGAGGCCTTTGCCAGCCCGAGCAACTGAC...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCATCTCAGCAAGAGACATaGGCAATTCCTACCAACCTG +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPSQQET*AIPTNL
Trigger: CAGGTTGGTAGGAATTGCCCATGTCTCTTGCTGAGA...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGCTCAAGCTCTTTaGGTAAGCGTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRLAQAL*VSVALG
Trigger: GCCCAGAGCTACGCTTACTCAAAGAGCTTGAGCCAG...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGGCTCAAGCTCTTTaGGTAAGCGTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPITLQLMEGRVLQAYISLAQAL*VSVALG
Trigger: GCCCAGAGCTACGCTTACTCAAAGAGCTTGAGCCAG...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTACGAGTGACTTTGTCTaGGGAAGGCTGATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSTSDFV*GRLMWF
Trigger: GAACCACATCAGCCTTCCTCAGACAAAGTCACTCGT...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCATACCAACCTGTAAACTaGAGGGATGTAGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPYQPVN*RDVEFW
Trigger: CCAGAACTCTACATCCCTTCAGTTTACAGGTTGGTA...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp CTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAGGGAAGTTCAGAGTCTaGGGCCCTTTGCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: LPETGSENYILASCNVNLGKFRV*GPLLRI
Trigger: GATTCTGAGCAAAGGGCCTCAGACTCTGAACTTCCC...TAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp ATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGAGAATTGTGCCCCATCACTCCTaGCTCATCTGTCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: MEGRVLQAYISLRLVLRIVPHHS*LICLWN
Trigger: GTTCCACAGACAGATGAGGCAGGAGTGATGGGGCAC...AATTCTCAGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTTCACTCTCGGTTGACTaGAAGAGGGAAGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSSLSVD*KREVDW
Trigger: CCAGTCTACTTCCCTCTTCCAGTCAACCGAGAGTGA...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp CTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAGGACTGAATGGAGCCTaGATGGTGGACCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: LPETGSENYILASCNVNLGLNGA*MVDHFH
Trigger: GTGAAAATGGTCCACCATTCAGGCTCCATTCAGTCC...TAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256737.8
CDS-3UTR TCA 90 bp AGCATATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATAGATACAGCTGTCGTTaGGTCTCTGCAGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SIYLPETGSENYILASCNRYSCR*VSAGSS
Trigger: ACTGCTCCCTGCAGAGACTCAACGACAGCTGTATCT...ATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp AGCATATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATTCCTCTGAACTTTCTTaGGTGCCCCATCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: SIYLPETGSENYILASCNSSELS*VPHHSC
Trigger: GCAGGAGTGATGGGGCACTCAAGAAAGTTCAGAGGA...ATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp ATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGAGAATTGGGAAGTTCAGAGTCTaGGGCCCTTTGCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: MEGRVLQAYISLRLVLRIGKFRV*GPLLRI
Trigger: GATTCTGAGCAAAGGGCCTCAGACTCTGAACTTCCC...AATTCTCAGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTGAAGTGGTGAATCCGTaGACGGCTGAAGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCEVVNP*TAEGAS
Trigger: ACTGGCCCCTTCAGCCGTGCACGGATTCACCACTTC...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGAGATACCTATGTCAGTTaGTCGGGCTGGCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRDTYVS*SGWQRP
Trigger: AGGCCTTTGCCAGCCCGAGCAACTGACATAGGTATC...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCATTTCTCCGTTGTTGTTaGAAATGTTCCAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPFLRCC*KCSSSA
Trigger: GGCTGAACTGGAACATTTGCAACAACAACGGAGAAA...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCACTGTCAGACAAATGTTaGTGTTCTGTGGCCCTAATT +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPLSDKC*CSVALI
Trigger: AATTAGGGCCACAGAACAGCAACATTTGTCTGACAG...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATTCACTCTCGGTTGACTaGAAGAGGGAAGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYSLSVD*KREVDW
Trigger: CCAGTCTACTTCCCTCTTCCAGTCAACCGAGAGTGA...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGGTCAGTTGCTCGGGCTaGCAAAGGCCTCCGCCATTG +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKVSCSG*QRPPPL
Trigger: CAATGGCGGAGGCCTTTGCCAGCCCGAGCAACTGAC...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCACTGGCTCAAGCTCTTTaGGTAAGCGTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPLAQAL*VSVALG
Trigger: GCCCAGAGCTACGCTTACTCAAAGAGCTTGAGCCAG...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR TCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCTTGCATCCTGCCCATTaGTTTGCTCCTCCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCLHPAH*FAPPVS
Trigger: ACTGACGGGAGGAGCAAATCAATGGGCAGGATGCAA...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCTTGCATCCTGCCCATTaGTTTGCTCCTCCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: ENYILASCNVNLTLFKVVLHPAH*FAPPVS
Trigger: ACTGACGGGAGGAGCAAATCAATGGGCAGGATGCAA...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTGAATCCGTGCACGGCTaGAGGGGCCAGTATAGCAGT +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGESVHG*RGQYSS
Trigger: ACTGCTATACTGGCCCCTTCAGCCGTGCACGGATTC...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGATGTCTGTTATTCTaGGGTCCATGGGTTTTAATG +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPRCLLF*GPWVLM
Trigger: CATTAAAACCCATGGACCTCAGAATAACAGACATCT...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTGTCTGAGGAAGGCTaGTGTGGTTCAGGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: ETGSENYILASCNVNLTLLSEEG*CGSGFP
Trigger: GGGAAAACCTGAACCACATCAGCCTTCCTCAGACAA...AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCACATGAAGAATATTCCTaGGACAGAAACAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPHEEYS*DRNKKT
Trigger: CGTCTTCTTGTTTCTGTCTCAGGAATATTCTTCATG...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTATGCAAACTGTTCCATaGCAACCAGGCGGTACACCA +
Preference number: 4 (lower is better)
Translates to: ETGSENYILASCNVNLTLMQTVP*QPGGTP
Trigger: TGGTGTACCGCCTGGTTGTCATGGAACAGTTTGCAT...AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTCCATTACACTGCAGTTaGTGGAAGGCAGAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ETGSENYILASCNVNLTLPLHCS*WKAEFS
Trigger: GGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGG...AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGAAGCTTATGCCTCCTCTaGACTTTCTTGAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRSLCLL*TFLSAP
Trigger: TGGGGCACTCAAGAAAGTTCAGAGGAGGCATAAGCT...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATACCACACATTGTACAGTaGAAGCTCTTCAGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSIPHIVQ*KLFSLE
Trigger: TTCCAAGCTGAAGAGCTTTCACTGTACAATGTGTGG...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACATGATATCGGGGCTTaGAATAGCTGGCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRHDIGA*NSWLLL
Trigger: GAGAAGGAGCCAGCTATTGCAAGCCCCGATATCATG...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGGAAGTGGTGAATCCGTaGACGGCTGAAGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKEVVNP*TAEGAS
Trigger: ACTGGCCCCTTCAGCCGTGCACGGATTCACCACTTC...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCGAAGTGGTGAATCCGTaGACGGCTGAAGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSEVVNP*TAEGAS
Trigger: ACTGGCCCCTTCAGCCGTGCACGGATTCACCACTTC...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAATTATACATGTGGTTTaGCAAGTATGCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPIIHVV*QVCLPP
Trigger: AGGAGGAAGGCATACTTGGCAAACCACATGTATAAT...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGCCATGCCTGGCTTGTaGACATTTACATGGAAATCT +
Preference number: 4 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSAMPGL*TFTWKS
Trigger: AGATTTCCATGTAAATGTGCACAAGCCAGGCATGGC...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTCTGAACTTTCTTGAGTaGCCCATCACTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ETGSENYILASCNVNLTLLNFLE*PITPAS
Trigger: TGAGGCAGGAGTGATGGGGCACTCAAGAAAGTTCAG...AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp GAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTGAGTCTGAGGCCCTTTaGTCAGAATCAGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: ETGSENYILASCNVNLTLESEAL*SESEDK
Trigger: CTTGTCCTCTGATTCTGAGCAAAGGGCCTCAGACTC...AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCGTAGGCTCCCTCATGTaGTGGAAACGCTGCTATGTA +
Preference number: 4 (lower is better)
Translates to: FPITLQLMEGRVLQAYISVGSLM*WKRCYV
Trigger: TACATAGCAGCGTTTCCACCACATGAGGGAGCCTAC...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAACAAATATGTCACCTTaGCATAGATACAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPTNMSP*HRYSCR
Trigger: ACGACAGCTGTATCTATGCCAAGGTGACATATTTGT...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCATAGATGTGGGAGCCTaGGATTCACTCTCGGTTGAC +
Preference number: 4 (lower is better)
Translates to: ENYILASCNVNLTLFKVVIDVGA*DSLSVD
Trigger: GTCAACCGAGAGTGAATCTCAGGCTCCCACATCTAT...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTCCAAACAAAAATCGCTaGGGTCAGCAAATGAACATC +
Preference number: 4 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSPNKNR*GQQMNI
Trigger: GATGTTCATTTGCTGACCTCAGCGATTTTTGTTTGG...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp CTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAACATGAAGAATATTCCTaGGACAGAAACAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: LTTLFPITLQLMEGRVLQHEEYS*DRNKKT
Trigger: CGTCTTCTTGTTTCTGTCTCAGGAATATTCTTCATG...TTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCATGCAAACTGTTCCATaGCAACCAGGCGGTACACCA +
Preference number: 4 (lower is better)
Translates to: ENYILASCNVNLTLFKVVMQTVP*QPGGTP
Trigger: TGGTGTACCGCCTGGTTGTCATGGAACAGTTTGCAT...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACATGTATTCCCCGCTTaGTTTTATGTCGTGACCACC +
Preference number: 4 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRHVFPA*FYVVTT
Trigger: GGTGGTCACGACATAAAATCAAGCGGGGAATACATG...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAAACCTCTCTGGAATCTaGATGGAAGAGTTTCACATA +
Preference number: 4 (lower is better)
Translates to: LTTLFPITLQLMEGRVLQNLSGI*MEEFHI
Trigger: TATGTGAAACTCTTCCATTCAGATTCCAGAGAGGTT...TTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAGCCTCTCTGCATACTTaGACAGCGTGTCCCATGGAA +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPASLHT*TACPME
Trigger: TTCCATGGGACACGCTGTGCAAGTATGCAGAGAGGC...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCGATATTCAGCCTCTCTaGATACTTGCACAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: FPITLQLMEGRVLQAYISDIQPL*ILAQRV
Trigger: GACACGCTGTGCAAGTATGCAGAGAGGCTGAATATC...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAACAAACCAACAATTGCTaGAGGAATCAACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: LTTLFPITLQLMEGRVLQQTNNC*RNQHSS
Trigger: ACTGGAATGTTGATTCCTGCAGCAATTGTTGGTTTG...TTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATAAGCAGCAGCAGATGTTaGAAACTGCCAGTATTGTTT +
Preference number: 4 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSISSSRC*KLPVLF
Trigger: AAACAATACTGGCAGTTTGCAACATCTGCTGCTGCT...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATTTCTCCGTTGTTGTTaGAAATGTTCCAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSIFLRCC*KCSSSA
Trigger: GGCTGAACTGGAACATTTGCAACAACAACGGAGAAA...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGGTGGTTTGCCAAGTATaGCTTCCTCCTAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPEVVCQV*LPPRFH
Trigger: GTGAAATCTAGGAGGAAGGCATACTTGGCAAACCAC...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCGTGCCCCATCACTCCTaGCTCATCTGTCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSVPHHS*LICLWN
Trigger: GTTCCACAGACAGATGAGGCAGGAGTGATGGGGCAC...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATGAAAAGCACAACTTTTaGAGACCAGTCGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYEKHNF*RPVGTE
Trigger: TTCTGTCCCGACTGGTCTGCAAAAGTTGTGCTTTTC...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672621.1
CDS-3UTR CCA 90 bp CTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAAGAACCATTGGGTTTTaGGCCATCCAGTTTTTGATT +
Preference number: 4 (lower is better)
Translates to: LTTLFPITLQLMEGRVLQRTIGF*AIQFLI
Trigger: AATCAAAAACTGGATGGCCCAAAACCCAATGGTTCT...TTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCATTCCATTTTCATATTTaGTGCGTTCCAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPFHFHI*CVPACD
Trigger: ATCACATGCTGGAACGCACCAAATATGAAAATGGAA...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACCCTTTGGTACGTCTaGAATCAGGTATGCGATGAA +
Preference number: 4 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPETLWYV*NQVCDE
Trigger: TTCATCGCATACCTGATTCCAGACGTACCAAAGGGT...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp GAAAGCTCTTCAGCTTGGAACAACTTGTCAAGGCAGACTGCATGCACATATATACAGTCGGGACAGAACTaGAGTGCTGAAGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ESSSAWNNLSRQTACTYIQSGQN*SAEVPV
Trigger: AACTGGAACTTCAGCACTCCAGTTCTGTCCCGACTG...TATATATGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672621.1
CDS-3UTR TCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAGCTGAGGTCAGCAAATaGACATCTCAGCACAGAGTC +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPAEVSK*TSQHRV
Trigger: GACTCTGTGCTGAGATGTTCATTTGCTGACCTCAGC...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR TCA 90 bp CTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTACCAAACAAAAATCGCTaGGGTCAGCAAATGAACATC +
Preference number: 4 (lower is better)
Translates to: LPETGSENYILASCNVNLPNKNR*GQQMNI
Trigger: GATGTTCATTTGCTGACCTCAGCGATTTTTGTTTGG...TAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGTTGCATCCTGCCCATTaGTTTGCTCCTCCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKLHPAH*FAPPVS
Trigger: ACTGACGGGAGGAGCAAATCAATGGGCAGGATGCAA...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACGAATCCGTGCACGGCTaGAGGGGCCAGTATAGCAGT +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYESVHG*RGQYSS
Trigger: ACTGCTATACTGGCCCCTTCAGCCGTGCACGGATTC...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGAATCCGTGCACGGCTaGAGGGGCCAGTATAGCAGT +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCESVHG*RGQYSS
Trigger: ACTGCTATACTGGCCCCTTCAGCCGTGCACGGATTC...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTATTATGAAGTGGTaGATCCGTGCACGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ETGSENYILASCNVNLTLFIMKW*IRARLK
Trigger: CTTCAGCCGTGCACGGATTCACCACTTCATAATAAA...AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCAGATACAGCTGTCGTTaGGTCTCTGCAGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSRYSCR*VSAGSS
Trigger: ACTGCTCCCTGCAGAGACTCAACGACAGCTGTATCT...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCGTTCAGGTTTTCCCGTaGTGGGATTTACAATCTCCA +
Preference number: 4 (lower is better)
Translates to: FPITLQLMEGRVLQAYISVQVFP*WDLQSP
Trigger: TGGAGATTGTAAATCCCATCACGGGAAAACCTGAAC...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTTCATCCATCAGTCCATaGAGGTTCATGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCSSISP*RFMGCR
Trigger: TCTGCAGCCCATGAACCTTCATGGACTGATGGATGA...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTTTACAAATGCATTGGTaGTCACAGCCAATATACCGA +
Preference number: 4 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSLQMHW*SQPIYR
Trigger: TCGGTATATTGGCTGTGATCACCAATGCATTTGTAA...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCATCACTTGGTTCTACATaGTTTGCACAGGGGCCATAT +
Preference number: 4 (lower is better)
Translates to: YISLRLVLRITSWLPAMSSLGST*FAQGPY
Trigger: ATATGGCCCCTGTGCAAATCATGTAGAACCAAGTGA...TGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGTCACAGTCAGAATTCTaGGTTCAGCTGCATTTGGAA +
Preference number: 4 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPESQSEF*VQLHLE
Trigger: TTCCAAATGCAGCTGAACTCAGAATTCTGACTGTGA...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR GCA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATACAGAGGTCCACTGGATaGTATGTAATTCATGTCATT +
Preference number: 4 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSIQRSTG*YVIHVI
Trigger: AATGACATGAATTACATAGCATCCAGTGGACCTCTG...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCGCCTCTCTGCATACTTaGACAGCGTGTCCCATGGAA +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSASLHT*TACPME
Trigger: TTCCATGGGACACGCTGTGCAAGTATGCAGAGAGGC...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATAATAAGTTTGCATCCTaGCCATTGATTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYNKFAS*PLICSS
Trigger: GGAGGAGCAAATCAATGGGCAGGATGCAAACTTATT...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATAGCAGCAGCAGATGTTaGAAACTGCCAGTATTGTTT +
Preference number: 4 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYSSSRC*KLPVLF
Trigger: AAACAATACTGGCAGTTTGCAACATCTGCTGCTGCT...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAGATACCTATGTCAGTTaGTCGGGCTGGCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIDTYVS*SGWQRP
Trigger: AGGCCTTTGCCAGCCCGAGCAACTGACATAGGTATC...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTGATACCTATGTCAGTTaGTCGGGCTGGCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSDTYVS*SGWQRP
Trigger: AGGCCTTTGCCAGCCCGAGCAACTGACATAGGTATC...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATGTAGTCTCTGTACCTaGAATAACCAGATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSICSLCT*NNQIFP
Trigger: TGGGAAAATCTGGTTATTGCAGGTACAGAGACTACA...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAATCCCAAAAACAAGGTaGTCAAACACAATAATGAAG +
Preference number: 4 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPIPKTR*SNTIMK
Trigger: CTTCATTATTGTGTTTGAGCACCTTGTTTTTGGGAT...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGTGCAACTCTTCAACTaGATAGTCAATGTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSVQLFN*IVNVKQ
Trigger: CTGCTTTACATTGACTATGCAGTTGAAGAGTTGCAC...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGATACGTACTGTCAAGGTaGAAAGGGACAAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRYVLSR*KGTRKT
Trigger: GGTTTTCCTTGTCCCTTTGCACCTTGACAGTACGTA...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTGAGTCTGAGGCCCTTTaGTCAGAATCAGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCESEAL*SESEDK
Trigger: CTTGTCCTCTGATTCTGAGCAAAGGGCCTCAGACTC...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp CTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTATACCTTCATTATATTTaGCTTTGGCAGCCCACACAC +
Preference number: 4 (lower is better)
Translates to: LPETGSENYILASCNVNLYLHYI*LWQPTH
Trigger: GTGTGTGGGCTGCCAAAGGCAAATATAATGAAGGTA...TAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672621.1
CDS-3UTR GCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCCATGAGTTGGAAGCGTaGTCATGTCTGAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCHELEA*SCLKPS
Trigger: TGAAGGCTTCAGACATGAGCACGCTTCCAACTCATG...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672621.1
CDS-3UTR CCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCAGGGATGTAGAGTTCTaGCAGCCAAGGCAAGGATTT +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCRDVEF*QPRQGF
Trigger: AAATCCTTGCCTTGGCTGCCAGAACTCTACATCCCT...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATTGCCTCATCTGTCTGTaGAACAGACATACTCATAGA +
Preference number: 4 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYCLICL*NRHTHR
Trigger: TCTATGAGTATGTCTGTTCCACAGACAGATGAGGCA...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTAGATTCACTCTCGGTTaGCTGGAAGAGGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCRFTLG*LEEGSR
Trigger: TCTACTTCCCTCTTCCAGTCAACCGAGAGTGAATCT...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR TCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATAATAGATGTGGGAGCCTaGGATTCACTCTCGGTTGAC +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWIIDVGA*DSLSVD
Trigger: GTCAACCGAGAGTGAATCTCAGGCTCCCACATCTAT...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR TCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAATAGATGTGGGAGCCTaGGATTCACTCTCGGTTGAC +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIIDVGA*DSLSVD
Trigger: GTCAACCGAGAGTGAATCTCAGGCTCCCACATCTAT...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR TCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGGCTGAGGTCAGCAAATaGACATCTCAGCACAGAGTC +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKAEVSK*TSQHRV
Trigger: GACTCTGTGCTGAGATGTTCATTTGCTGACCTCAGC...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR TCA 90 bp ATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGAGAATTTCAAGCCTTCTGCTCTaGGGTTCTTTTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: MEGRVLQAYISLRLVLRISSLLL*GSFQMC
Trigger: ACACATTTGAAAAGAACCTCAGAGCAGAAGGCTTGA...AATTCTCAGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CTGTGGAACAGACATACTCATAGATACAGAGTTGACGTTGAAATAGAAATTCCATTGCATCCTGCCCATTaGTTTGCTCCTCCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: LWNRHTHRYRVDVEIEIPLHPAH*FAPPVS
Trigger: ACTGACGGGAGGAGCAAATCAATGGGCAGGATGCAA...TGGAATTTCTATTTCAACGTCAACTCTGTATCTATGAGTATGTCTGTTCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCTTTATTATGAAGTGGTaGATCCGTGCACGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCFIMKW*IRARLK
Trigger: CTTCAGCCGTGCACGGATTCACCACTTCATAATAAA...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATTAAATCCAGAGGCTaGTGCTTATACCACATTCCC +
Preference number: 4 (lower is better)
Translates to: YISLRLVLRITSWLPAMSIKSRG*CLYHIP
Trigger: GGGAATGTGGTATAAGCATCAGCCTCTGGATTTAAT...TGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCATTAAATCCAGAGGCTaGTGCTTATACCACATTCCC +
Preference number: 4 (lower is better)
Translates to: FPITLQLMEGRVLQAYISIKSRG*CLYHIP
Trigger: GGGAATGTGGTATAAGCATCAGCCTCTGGATTTAAT...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTATTAAATCCAGAGGCTaGTGCTTATACCACATTCCC +
Preference number: 4 (lower is better)
Translates to: ETGSENYILASCNVNLTLIKSRG*CLYHIP
Trigger: GGGAATGTGGTATAAGCATCAGCCTCTGGATTTAAT...AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCACCAAAGTATAGCCTaGTTAAATCCAGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: FPITLQLMEGRVLQAYISHQSIA*LNPEAD
Trigger: ATCAGCCTCTGGATTTAATCAGGCTATACTTTGGTG...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCGTTCAGGTTTTCCCGTaGTGGGATTTACAATCTCCA +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCVQVFP*WDLQSP
Trigger: TGGAGATTGTAAATCCCATCACGGGAAAACCTGAAC...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTTGTCTGAGGAAGGCTaGTGTGGTTCAGGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSLSEEG*CGSGFP
Trigger: GGGAAAACCTGAACCACATCAGCCTTCCTCAGACAA...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATTTGTCTGAGGAAGGCTaGTGTGGTTCAGGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDLSEEG*CGSGFP
Trigger: GGGAAAACCTGAACCACATCAGCCTTCCTCAGACAA...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACGAGTGACTTTGTCTaGGGAAGGCTGATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDTSDFV*GRLMWF
Trigger: GAACCACATCAGCCTTCCTCAGACAAAGTCACTCGT...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGATGCAAACTGTTCCATaGCAACCAGGCGGTACACCA +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKMQTVP*QPGGTP
Trigger: TGGTGTACCGCCTGGTTGTCATGGAACAGTTTGCAT...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTATGCAAACTGTTCCATaGCAACCAGGCGGTACACCA +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGMQTVP*QPGGTP
Trigger: TGGTGTACCGCCTGGTTGTCATGGAACAGTTTGCAT...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCACTTGATTTTATGTCGTaGCCACCAGTTCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: YISLRLVLRITSWLPAMSLDFMS*PPVLDQ
Trigger: TTGATCCAGAACTGGTGGTCACGACATAAAATCAAG...TGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGAGAATTCTTGATTTTATGTCGTaGCCACCAGTTCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: MEGRVLQAYISLRLVLRILDFMS*PPVLDQ
Trigger: TTGATCCAGAACTGGTGGTCACGACATAAAATCAAG...AATTCTCAGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTCATGTATTCCCCGCTTaGTTTTATGTCGTGACCACC +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCHVFPA*FYVVTT
Trigger: GGTGGTCACGACATAAAATCAAGCGGGGAATACATG...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCAATCATTTTCCCACTaGGGTATGGAAGCATCATGT +
Preference number: 4 (lower is better)
Translates to: FPITLQLMEGRVLQAYISQSFSH*GMEASC
Trigger: ACATGATGCTTCCATACCTCAGTGGGAAAATGATTG...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGAGAATTCAATCATTTTCCCACTaGGGTATGGAAGCATCATGT +
Preference number: 4 (lower is better)
Translates to: MEGRVLQAYISLRLVLRIQSFSH*GMEASC
Trigger: ACATGATGCTTCCATACCTCAGTGGGAAAATGATTG...AATTCTCAGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATATCATCCATCAGTCCATaGAGGTTCATGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVISSISP*RFMGCR
Trigger: TCTGCAGCCCATGAACCTTCATGGACTGATGGATGA...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCTCACTTGGTTCTACATaGTTTGCACAGGGGCCATAT +
Preference number: 4 (lower is better)
Translates to: ENYILASCNVNLTLFKVVSLGST*FAQGPY
Trigger: ATATGGCCCCTGTGCAAATCATGTAGAACCAAGTGA...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCTCACTTGGTTCTACATaGTTTGCACAGGGGCCATAT +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCSLGST*FAQGPY
Trigger: ATATGGCCCCTGTGCAAATCATGTAGAACCAAGTGA...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGAGGATAGGCTATTGTTaGCATATCCCTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPERIGYC*HIPSSN
Trigger: ATTGCTTGAAGGGATATGTCAACAATAGCCTATCCT...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACCATTACACTGCAGTTaGTGGAAGGCAGAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIPLHCS*WKAEFS
Trigger: GGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGG...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTCTTAGATTTTTGGTTTaGCTACTAAAGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSLRFLV*LLKVMC
Trigger: GCACATCACCTTTAGTAGTCAAACCAAAAATCTAAG...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp TATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCATTCTCAAGCTCACGATaGGAAAAGCACAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: YISLRLVLRITSWLPAMSFSSSR*EKHNFC
Trigger: GCAAAAGTTGTGCTTTTCTCATCGTGAGCTTGAGAA...TGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672621.1
CDS-3UTR GCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTCATGATATCGGGGCTTaGAATAGCTGGCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGHDIGA*NSWLLL
Trigger: GAGAAGGAGCCAGCTATTGCAAGCCCCGATATCATG...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTCATGATATCGGGGCTTaGAATAGCTGGCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSHDIGA*NSWLLL
Trigger: GAGAAGGAGCCAGCTATTGCAAGCCCCGATATCATG...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTGATATTCAGCCTCTCTaGATACTTGCACAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCDIQPL*ILAQRV
Trigger: GACACGCTGTGCAAGTATGCAGAGAGGCTGAATATC...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTTCCTGCCCATTGATTTaGTCCTCCCGTCAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCSCPLI*SSRQCN
Trigger: ATTACACTGACGGGAGGAGCAAATCAATGGGCAGGA...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATCAAACCAACAATTGCTaGAGGAATCAACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYQTNNC*RNQHSS
Trigger: ACTGGAATGTTGATTCCTGCAGCAATTGTTGGTTTG...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GACAAATGTTGCTGTTCTGTGGCCCTAATTTGGAAAAGATGTTGGTTGATGTTACTGTCGTTGAGTCTCTaGAGGGAGCAGTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: DKCCCSVALIWKRCWLMLLSLSL*REQFLS
Trigger: TGACAAGAACTGCTCCCTGCAGAGACTCAACGACAG...TAACATCAACCAACATCTTTTCCAAATTAGGGCCACAGAACAGCAACATTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATACTGTCGTTGAGTCTCTaGAGGGAGCAGTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWILSLSL*REQFLS
Trigger: TGACAAGAACTGCTCCCTGCAGAGACTCAACGACAG...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATCTGTCGTTGAGTCTCTaGAGGGAGCAGTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDLSLSL*REQFLS
Trigger: TGACAAGAACTGCTCCCTGCAGAGACTCAACGACAG...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTCACAACTCCAAACACTaGAGTGATCACCAAGGATAT +
Preference number: 4 (lower is better)
Translates to: ETGSENYILASCNVNLTLHNSKH*SDHQGY
Trigger: ATATCCTTGGTGATCACTGCAGTGTTTGGAGTTGTG...AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATAGCAGATGTTGCAAACTaGCAGTATTGTTTGATGAAA +
Preference number: 4 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSIADVAN*QYCLMK
Trigger: TTTCATCAAACAATACTGGCAGTTTGCAACATCTGC...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTCTCCGTTGTTGTTaGAAATGTTCCAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ETGSENYILASCNVNLTLFLRCC*KCSSSA
Trigger: GGCTGAACTGGAACATTTGCAACAACAACGGAGAAA...AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAAACTGGTGTCAGAGCTaGATAAACCACAATGTATAC +
Preference number: 4 (lower is better)
Translates to: LPETGSENYILASCNVNLNWCQS*INHNVY
Trigger: GTATACATTGTGGTTTATGCAGCTCTGACACCAGTT...TAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp GAAAGCTCTTCAGCTTGGAACAACTTGTCAAGGCAGACTGCATGCACATATATAAAAAAGCGTAAGTGTTaGAGAGCATCTGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ESSSAWNNLSRQTACTYIKKRKC*RASGLS
Trigger: ACTGAGGCCAGATGCTCTGCAACACTTACGCTTTTT...TATATATGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp CTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAAGTTGTATCTCATCATaGAGTCACTCAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: LPETGSENYILASCNVNLSCISS*SHSAAF
Trigger: AAATGCTGCTGAGTGACTGCATGATGAGATACAACT...TAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCACTCTCGGTTGACTaGAAGAGGGAAGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSSLSVD*KREVDW
Trigger: CCAGTCTACTTCCCTCTTCCAGTCAACCGAGAGTGA...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR CCA 90 bp CTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAAGAACCATTGGGTTTTaGGCCATCCAGTTTTTGATT +
Preference number: 4 (lower is better)
Translates to: LPETGSENYILASCNVNLRTIGF*AIQFLI
Trigger: AATCAAAAACTGGATGGCCCAAAACCCAATGGTTCT...TAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCGTAGGCTCCCTCATGTaGTGGAAACGCTGCTATGTA +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSVGSLM*WKRCYV
Trigger: TACATAGCAGCGTTTCCACCACATGAGGGAGCCTAC...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTGTAGGCTCCCTCATGTaGTGGAAACGCTGCTATGTA +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSVGSLM*WKRCYV
Trigger: TACATAGCAGCGTTTCCACCACATGAGGGAGCCTAC...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACGTGACCACCAGTTCTaGATCAACGGGTATCCTAGT +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIRDHQF*INGYPS
Trigger: ACTAGGATACCCGTTGATCCAGAACTGGTGGTCACG...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCACCCTTTGGTACGTCTaGAATCAGGTATGCGATGAA +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCTLWYV*NQVCDE
Trigger: TTCATCGCATACCTGATTCCAGACGTACCAAAGGGT...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATATGCTGTTTAAAGGACTaGATGGAGCCTGAATGGTGG +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWICCLKD*MEPEWW
Trigger: CCACCATTCAGGCTCCATTCAGTCCTTTAAACAGCA...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256737.8
CDS-3UTR TCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTAGATACAGCTGTCGTTaGGTCTCTGCAGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCRYSCR*VSAGSS
Trigger: ACTGCTCCCTGCAGAGACTCAACGACAGCTGTATCT...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CTGTGGAACAGACATACTCATAGATACAGAGTTGACGTTGAAATAGAAATTCCATTGTCTGAGGAAGGCTaGTGTGGTTCAGGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LWNRHTHRYRVDVEIEIPLSEEG*CGSGFP
Trigger: GGGAAAACCTGAACCACATCAGCCTTCCTCAGACAA...TGGAATTTCTATTTCAACGTCAACTCTGTATCTATGAGTATGTCTGTTCCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGATCACCAAGGATATCATaGAGAATATTCCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRSPRIS*RIFLRQ
Trigger: CTGTCTCAGGAATATTCTTCATGATATCCTTGGTGA...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTCATGTATTCCCCGCTTaGTTTTATGTCGTGACCACC +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGHVFPA*FYVVTT
Trigger: GGTGGTCACGACATAAAATCAAGCGGGGAATACATG...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCATGTATTCCCCGCTTaGTTTTATGTCGTGACCACC +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSHVFPA*FYVVTT
Trigger: GGTGGTCACGACATAAAATCAAGCGGGGAATACATG...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCGCCTCCGCCATTGAGTaGCAAATTTGTATGCATCCA +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSASAIE*QICMHP
Trigger: TGGATGCATACAAATTTGTCACTCAATGGCGGAGGC...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp AGCATATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATAGGATAGGCTATTGTTaGCATATCCCTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SIYLPETGSENYILASCNRIGYC*HIPSSN
Trigger: ATTGCTTGAAGGGATATGTCAACAATAGCCTATCCT...ATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCACCACACATTGTACAGTaGAAGCTCTTCAGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPPHIVQ*KLFSLE
Trigger: TTCCAAGCTGAAGAGCTTTCACTGTACAATGTGTGG...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp AGCATATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATAGCCATGATCTATGGTaGTTTTCCACACATTGTACA +
Preference number: 4 (lower is better)
Translates to: SIYLPETGSENYILASCNSHDLW*FSTHCT
Trigger: TGTACAATGTGTGGAAAATCACCATAGATCATGGCT...ATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACAACATCAAGCCTTCTaGTCTGAGGTTCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRQHQAF*SEVLFK
Trigger: TTTGAAAAGAACCTCAGAGCAGAAGGCTTGATGTTG...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGAGAATTCAACATCAAGCCTTCTaGTCTGAGGTTCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: MEGRVLQAYISLRLVLRIQHQAF*SEVLFK
Trigger: TTTGAAAAGAACCTCAGAGCAGAAGGCTTGATGTTG...AATTCTCAGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCGATATTCAGCCTCTCTaGATACTTGCACAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSDIQPL*ILAQRV
Trigger: GACACGCTGTGCAAGTATGCAGAGAGGCTGAATATC...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTGATATTCAGCCTCTCTaGATACTTGCACAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSDIQPL*ILAQRV
Trigger: GACACGCTGTGCAAGTATGCAGAGAGGCTGAATATC...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATATCCTGCCCATTGATTTaGTCCTCCCGTCAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVISCPLI*SSRQCN
Trigger: ATTACACTGACGGGAGGAGCAAATCAATGGGCAGGA...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCTCCTGCCCATTGATTTaGTCCTCCCGTCAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSSCPLI*SSRQCN
Trigger: ATTACACTGACGGGAGGAGCAAATCAATGGGCAGGA...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAATAAGTTTGCATCCTaGCCATTGATTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ENYILASCNVNLTLFKVVNKFAS*PLICSS
Trigger: GGAGGAGCAAATCAATGGGCAGGATGCAAACTTATT...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGGACTGTGGCCCATATTaGCATAAAAATAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPEDCGPY*HKNSKE
Trigger: TTCTTTGCTATTTTTATGGCAATATGGGCCACAGTC...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTAATAGCAATTACAAATaGATTGGTGATCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSNSNYK*IGDHSQ
Trigger: TTGGCTGTGATCACCAATGCATTTGTAATTGCTATT...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCTGGTTCTACATGATTTaGACAGGGGCCATATTTGTA +
Preference number: 4 (lower is better)
Translates to: FPITLQLMEGRVLQAYISWFYMI*TGAIFV
Trigger: TACAAATATGGCCCCTGTGCAAATCATGTAGAACCA...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGATGGTTCTACATGATTTaGACAGGGGCCATATTTGTA +
Preference number: 4 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRWFYMI*TGAIFV
Trigger: TACAAATATGGCCCCTGTGCAAATCATGTAGAACCA...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGCTAGCAGCAAGGATATaGCAGTATTGTAAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPELAARI*QYCKVN
Trigger: GTTTACTTTACAATACTGGCATATCCTTGCTGCTAG...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAGCCATGCCTGGCTTGTaGACATTTACATGGAAATCT +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPAMPGL*TFTWKS
Trigger: AGATTTCCATGTAAATGTGCACAAGCCAGGCATGGC...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTTACGTACTGTCAAGGTaGAAAGGGACAAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCYVLSR*KGTRKT
Trigger: GGTTTTCCTTGTCCCTTTGCACCTTGACAGTACGTA...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp AGCATATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATAACTGGTGTCAGAGCTaGATAAACCACAATGTATAC +
Preference number: 4 (lower is better)
Translates to: SIYLPETGSENYILASCNNWCQS*INHNVY
Trigger: GTATACATTGTGGTTTATGCAGCTCTGACACCAGTT...ATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTTTATCTAAAAGTACGTaGACAGACTCAGACAATTAC +
Preference number: 4 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSLSKST*TDSDNY
Trigger: GTAATTGTCTGAGTCTGTGCACGTACTTTTAGATAA...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp CTGTGGAACAGACATACTCATAGATACAGAGTTGACGTTGAAATAGAAATTCCACGTGACCACCAGTTCTaGATCAACGGGTATCCTAGT +
Preference number: 4 (lower is better)
Translates to: LWNRHTHRYRVDVEIEIPRDHQF*INGYPS
Trigger: ACTAGGATACCCGTTGATCCAGAACTGGTGGTCACG...TGGAATTTCTATTTCAACGTCAACTCTGTATCTATGAGTATGTCTGTTCCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTACCCTTTGGTACGTCTaGAATCAGGTATGCGATGAA +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCTLWYV*NQVCDE
Trigger: TTCATCGCATACCTGATTCCAGACGTACCAAAGGGT...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCCTGAGAATTACATCCTaGCTTCCTGCAATGTCAATC +
Preference number: 4 (lower is better)
Translates to: ENYILASCNVNLTLFKVVLRITS*LPAMSI
Trigger: GATTGACATTGCAGGAAGCCAGGATGTAATTCTCAG...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp CATGATATTTTAAGCCATGCCTGGCTTGTGCACATTTACATGGAAATCTGTCTTAGGGATGTAGAGTTCTaGCAGCCAAGGCAAGGATTT +
Preference number: 4 (lower is better)
Translates to: HDILSHAWLVHIYMEICLRDVEF*QPRQGF
Trigger: AAATCCTTGCCTTGGCTGCCAGAACTCTACATCCCT...AAGACAGATTTCCATGTAAATGTGCACAAGCCAGGCATGGCTTAAAATATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTCTCAGCAAGAGACATaGGCAATTCCTACCAACCTG +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGSQQET*AIPTNL
Trigger: CAGGTTGGTAGGAATTGCCCATGTCTCTTGCTGAGA...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp GAAAGCTCTTCAGCTTGGAACAACTTGTCAAGGCAGACTGCATGCACATATATAAGCATAAATCCCCTGTaGCACAGATCCATAATCTCA +
Preference number: 4 (lower is better)
Translates to: ESSSAWNNLSRQTACTYISINPL*HRSIIS
Trigger: TGAGATTATGGATCTGTGCCACAGGGGATTTATGCT...TATATATGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp GAAAGCTCTTCAGCTTGGAACAACTTGTCAAGGCAGACTGCATGCACATATATATGCCTCATCTGTCTGTaGAACAGACATACTCATAGA +
Preference number: 4 (lower is better)
Translates to: ESSSAWNNLSRQTACTYICLICL*NRHTHR
Trigger: TCTATGAGTATGTCTGTTCCACAGACAGATGAGGCA...TATATATGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCGAGTTCAGCTGCATTTaGAATCCTTCATTGCTGACA +
Preference number: 4 (lower is better)
Translates to: ENYILASCNVNLTLFKVVEFSCI*NPSLLT
Trigger: TGTCAGCAATGAAGGATTCCAAATGCAGCTGAACTC...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR TCA 90 bp ACTAAAGGTGATGTGCAACTCTTCAACTGCATAGTCAATGTAAAGCAGCATAAAAGATTCACTCTCGGTTaGCTGGAAGAGGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: TKGDVQLFNCIVNVKQHKRFTLG*LEEGSR
Trigger: TCTACTTCCCTCTTCCAGTCAACCGAGAGTGAATCT...TTTATGCTGCTTTACATTGACTATGCAGTTGAAGAGTTGCACATCACCTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGGCTGAGGTCAGCAAATaGACATCTCAGCACAGAGTC +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMAEVSK*TSQHRV
Trigger: GACTCTGTGCTGAGATGTTCATTTGCTGACCTCAGC...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR TCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCATAAGTAGCGTGTTCTaGTTCATCCGTGTAATCCTT +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCISSVF*FIRVIL
Trigger: AAGGATTACACGGATGAATCAGAACACGCTACTTAT...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTTATTATGAAGTGGTaGATCCGTGCACGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGFIMKW*IRARLK
Trigger: CTTCAGCCGTGCACGGATTCACCACTTCATAATAAA...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGTTTATTATGAAGTGGTaGATCCGTGCACGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKFIMKW*IRARLK
Trigger: CTTCAGCCGTGCACGGATTCACCACTTCATAATAAA...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTGTTCAGGTTTTCCCGTaGTGGGATTTACAATCTCCA +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGVQVFP*WDLQSP
Trigger: TGGAGATTGTAAATCCCATCACGGGAAAACCTGAAC...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAGTTCAGGTTTTCCCGTaGTGGGATTTACAATCTCCA +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIVQVFP*WDLQSP
Trigger: TGGAGATTGTAAATCCCATCACGGGAAAACCTGAAC...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTACGAGTGACTTTGTCTaGGGAAGGCTGATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCTSDFV*GRLMWF
Trigger: GAACCACATCAGCCTTCCTCAGACAAAGTCACTCGT...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTGCTGTTTTCCCACTCTaGTTCTGTTCGAGGATATTC +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGAVFPL*FCSRIF
Trigger: GAATATCCTCGAACAGAATCAGAGTGGGAAAACAGC...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACTCATCCATCAGTCCATaGAGGTTCATGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYSSISP*RFMGCR
Trigger: TCTGCAGCCCATGAACCTTCATGGACTGATGGATGA...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATATCACTTGGTTCTACATaGTTTGCACAGGGGCCATAT +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVISLGST*FAQGPY
Trigger: ATATGGCCCCTGTGCAAATCATGTAGAACCAAGTGA...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCCAGGTATGCGATGAATaGCTTAATCCCAAAAACAAG +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCQVCDE*LNPKNK
Trigger: CTTGTTTTTGGGATTAAGTCATTCATCGCATACCTG...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACCCATTACACTGCAGTTaGTGGAAGGCAGAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYPLHCS*WKAEFS
Trigger: GGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGG...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAGGGGTAAAAGAGACTTaGAGTAGCCAATGCAATGGA +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIGVKET*SSQCNG
Trigger: TCCATTGCATTGGCTACTTCAAGTCTCTTTTACCCC...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTGGGGTAAAAGAGACTTaGAGTAGCCAATGCAATGGA +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSGVKET*SSQCNG
Trigger: TCCATTGCATTGGCTACTTCAAGTCTCTTTTACCCC...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGAGCTTATGCCTCCTCTaGACTTTCTTGAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMSLCLL*TFLSAP
Trigger: TGGGGCACTCAAGAAAGTTCAGAGGAGGCATAAGCT...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGAAGCACTCTTCAGTGTaGCAACTGAAAGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKKHSSV*QLKVLP
Trigger: AGGGAGAACTTTCAGTTGTCACACTGAAGAGTGCTT...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR TCA 90 bp ATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGAGAATTGACAACAGTCTCAAATaGCAATCTTCTTTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: MEGRVLQAYISLRLVLRIDNSLK*QSSLKH
Trigger: GTGCTTTAAAGAAGATTGTCATTTGAGACTGTTGTC...AATTCTCAGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR GCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCCAGAGGTCCACTGGATaGTATGTAATTCATGTCATT +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCQRSTG*YVIHVI
Trigger: AATGACATGAATTACATAGCATCCAGTGGACCTCTG...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGCATGATATCGGGGCTTaGAATAGCTGGCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMHDIGA*NSWLLL
Trigger: GAGAAGGAGCCAGCTATTGCAAGCCCCGATATCATG...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ACTAAAGGTGATGTGCAACTCTTCAACTGCATAGTCAATGTAAAGCAGCATAAATCCTGCCCATTGATTTaGTCCTCCCGTCAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: TKGDVQLFNCIVNVKQHKSCPLI*SSRQCN
Trigger: ATTACACTGACGGGAGGAGCAAATCAATGGGCAGGA...TTTATGCTGCTTTACATTGACTATGCAGTTGAAGAGTTGCACATCACCTTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCACACAACTCCAAACACTaGAGTGATCACCAAGGATAT +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPHNSKH*SDHQGY
Trigger: ATATCCTTGGTGATCACTGCAGTGTTTGGAGTTGTG...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTAGCAGCAGCAGATGTTaGAAACTGCCAGTATTGTTT +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCSSSRC*KLPVLF
Trigger: AAACAATACTGGCAGTTTGCAACATCTGCTGCTGCT...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGAGTGACAAATTTGTATaGATCCAGCCTGATTTCAAT +
Preference number: 4 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPESDKFV*IQPDFN
Trigger: ATTGAAATCAGGCTGGATGCATACAAATTTGTCACT...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAAATAGCAATTACAAATaGATTGGTGATCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: LPETGSENYILASCNVNLNSNYK*IGDHSQ
Trigger: TTGGCTGTGATCACCAATGCATTTGTAATTGCTATT...TAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATAATAGCAATTACAAATaGATTGGTGATCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYNSNYK*IGDHSQ
Trigger: TTGGCTGTGATCACCAATGCATTTGTAATTGCTATT...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGATCCCAAAAACAAGGTaGTCAAACACAATAATGAAG +
Preference number: 4 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPEIPKTR*SNTIMK
Trigger: CTTCATTATTGTGTTTGAGCACCTTGTTTTTGGGAT...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCACCTAGCATTCAAAGTTaGCATCATTTCTTCCCATTA +
Preference number: 4 (lower is better)
Translates to: YISLRLVLRITSWLPAMSPSIQS*HHFFPL
Trigger: TAATGGGAAGAAATGATGGCAACTTTGAATGCTAGG...TGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCGTGGTTTGCCAAGTATaGCTTCCTCCTAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSVVCQV*LPPRFH
Trigger: GTGAAATCTAGGAGGAAGGCATACTTGGCAAACCAC...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATAGTGGTTTGCCAAGTATaGCTTCCTCCTAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWIVVCQV*LPPRFH
Trigger: GTGAAATCTAGGAGGAAGGCATACTTGGCAAACCAC...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAGTGGTTTGCCAAGTATaGCTTCCTCCTAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIVVCQV*LPPRFH
Trigger: GTGAAATCTAGGAGGAAGGCATACTTGGCAAACCAC...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCATTATACATGTGGTTTaGCAAGTATGCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ENYILASCNVNLTLFKVVIIHVV*QVCLPP
Trigger: AGGAGGAAGGCATACTTGGCAAACCACATGTATAAT...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAAAAAAGCGTAAGTGTTaGAGAGCATCTGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIKKRKC*RASGLS
Trigger: ACTGAGGCCAGATGCTCTGCAACACTTACGCTTTTT...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTCTGTCAGACAAATGTTaGTGTTCTGTGGCCCTAATT +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCLSDKC*CSVALI
Trigger: AATTAGGGCCACAGAACAGCAACATTTGTCTGACAG...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp GAAAGCTCTTCAGCTTGGAACAACTTGTCAAGGCAGACTGCATGCACATATATACTAAAACTAACACACTaGAAGGGGCTGTCAGTATTT +
Preference number: 4 (lower is better)
Translates to: ESSSAWNNLSRQTACTYILKLTH*KGLSVF
Trigger: AAATACTGACAGCCCCTTGCAGTGTGTTAGTTTTAG...TATATATGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGATGTTACATACTGAGTaGTACACAAAGCATTTGACT +
Preference number: 4 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPEMLHTE*YTKHLT
Trigger: AGTCAAATGCTTTGTGTAGCACTCAGTATGTAACAT...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR CCA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCGCACAGCGTGTCCCATaGAATGTGAATTTTAATAAA +
Preference number: 4 (lower is better)
Translates to: FPITLQLMEGRVLQAYISAQRVP*NVNFNK
Trigger: TTTATTAAAATTCACATTCCATGGGACACGCTGTGC...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCACAAATATGTCACCTTaGCATAGATACAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCTNMSP*HRYSCR
Trigger: ACGACAGCTGTATCTATGCCAAGGTGACATATTTGT...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTCGTGACCACCAGTTCTaGATCAACGGGTATCCTAGT +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCRDHQF*INGYPS
Trigger: ACTAGGATACCCGTTGATCCAGAACTGGTGGTCACG...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTACCCTTTGGTACGTCTaGAATCAGGTATGCGATGAA +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSTLWYV*NQVCDE
Trigger: TTCATCGCATACCTGATTCCAGACGTACCAAAGGGT...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAAGCATATTATACATGTaGTTTGCCAAGTATGCCTTC +
Preference number: 4 (lower is better)
Translates to: YISLRLVLRITSWLPAMSSILYM*FAKYAF
Trigger: GAAGGCATACTTGGCAAACCACATGTATAATATGCT...TGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp ACTAAAGGTGATGTGCAACTCTTCAACTGCATAGTCAATGTAAAGCAGCATAAAGTGTTGCAGAGCATCTaGCCTCAGTTTTCCCGAATA +
Preference number: 4 (lower is better)
Translates to: TKGDVQLFNCIVNVKQHKVLQSI*PQFSRI
Trigger: TATTCGGGAAAACTGAGGCCAGATGCTCTGCAACAC...TTTATGCTGCTTTACATTGACTATGCAGTTGAAGAGTTGCACATCACCTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp GAAAGCTCTTCAGCTTGGAACAACTTGTCAAGGCAGACTGCATGCACATATATATCTGTGGCCCTAATTTaGAAAAGATGTTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: ESSSAWNNLSRQTACTYISVALI*KRCWLM
Trigger: CATCAACCAACATCTTTTCCAAATTAGGGCCACAGA...TATATATGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp CATGATATTTTAAGCCATGCCTGGCTTGTGCACATTTACATGGAAATCTGTCTTGAAAGCTCTTCAGCTTaGAACAACTTGTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HDILSHAWLVHIYMEICLESSSA*NNLSRQ
Trigger: CTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC...AAGACAGATTTCCATGTAAATGTGCACAAGCCAGGCATGGCTTAAAATATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAGAAAGCTCTTCAGCTTaGAACAACTTGTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIESSSA*NNLSRQ
Trigger: CTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGAGATTCACTCTCGGTTaGCTGGAAGAGGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMRFTLG*LEEGSR
Trigger: TCTACTTCCCTCTTCCAGTCAACCGAGAGTGAATCT...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR TCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATATCAAGCCTTCTGCTCTaGGGTTCTTTTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWISSLLL*GSFQMC
Trigger: ACACATTTGAAAAGAACCTCAGAGCAGAAGGCTTGA...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCATTAAATCCAGAGGCTaGTGCTTATACCACATTCCC +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSIKSRG*CLYHIP
Trigger: GGGAATGTGGTATAAGCATCAGCCTCTGGATTTAAT...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ACTAAAGGTGATGTGCAACTCTTCAACTGCATAGTCAATGTAAAGCAGCATAAAGCTGTTTTCCCACTCTaGTTCTGTTCGAGGATATTC +
Preference number: 4 (lower is better)
Translates to: TKGDVQLFNCIVNVKQHKAVFPL*FCSRIF
Trigger: GAATATCCTCGAACAGAATCAGAGTGGGAAAACAGC...TTTATGCTGCTTTACATTGACTATGCAGTTGAAGAGTTGCACATCACCTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTCTTGATTTTATGTCGTaGCCACCAGTTCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSLDFMS*PPVLDQ
Trigger: TTGATCCAGAACTGGTGGTCACGACATAAAATCAAG...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCAATCATTTTCCCACTaGGGTATGGAAGCATCATGT +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSQSFSH*GMEASC
Trigger: ACATGATGCTTCCATACCTCAGTGGGAAAATGATTG...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGGCCTCCGCCATTGAGTaGCAAATTTGTATGCATCCA +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMASAIE*QICMHP
Trigger: TGGATGCATACAAATTTGTCACTCAATGGCGGAGGC...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGCCTCCGCCATTGAGTaGCAAATTTGTATGCATCCA +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCASAIE*QICMHP
Trigger: TGGATGCATACAAATTTGTCACTCAATGGCGGAGGC...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCATTACAAATGCATTGGTaGTCACAGCCAATATACCGA +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPLQMHW*SQPIYR
Trigger: TCGGTATATTGGCTGTGATCACCAATGCATTTGTAA...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTAGGATAGGCTATTGTTaGCATATCCCTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCRIGYC*HIPSSN
Trigger: ATTGCTTGAAGGGATATGTCAACAATAGCCTATCCT...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTAGCCATGATCTATGGTaGTTTTCCACACATTGTACA +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCSHDLW*FSTHCT
Trigger: TGTACAATGTGTGGAAAATCACCATAGATCATGGCT...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTACTTTTGCAGACCTGTaGGAGAGAACAAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCTFADL*ERTKEK
Trigger: TTTCTCTTTTGTTCTCTCTCACAGGTCTGCAAAAGT...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525139.5
CDS-3UTR TCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTTCTCAAGCTCACGATaGGAAAAGCACAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSFSSSR*EKHNFC
Trigger: GCAAAAGTTGTGCTTTTCTCATCGTGAGCTTGAGAA...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000525139.5
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTCTTCAGTGTGACAACTaGAAGTTCTCCCTTTCACCG +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCLQCDN*KFSLSP
Trigger: CGGTGAAAGGGAGAACTTTCAGTTGTCACACTGAAG...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR TCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGGGAATCCTTCATTGCTaGCAACAGTCTCAAATGACA +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKGILHC*QQSQMT
Trigger: TGTCATTTGAGACTGTTGTCAGCAATGAAGGATTCC...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR GCA 90 bp GACAAATGTTGCTGTTCTGTGGCCCTAATTTGGAAAAGATGTTGGTTGATGTTATCCTCAGTATTAACTTaGTCTGCTTTGTCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: DKCCCSVALIWKRCWLMLSSVLT*SALSVE
Trigger: CTCCACTGACAAAGCAGAGCAAGTTAATACTGAGGA...TAACATCAACCAACATCTTTTCCAAATTAGGGCCACAGAACAGCAACATTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAATAAGTTTGCATCCTaGCCATTGATTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDNKFAS*PLICSS
Trigger: GGAGGAGCAAATCAATGGGCAGGATGCAAACTTATT...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCGACTGTGGCCCATATTaGCATAAAAATAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCDCGPY*HKNSKE
Trigger: TTCTTTGCTATTTTTATGGCAATATGGGCCACAGTC...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTCACAACTCCAAACACTaGAGTGATCACCAAGGATAT +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSHNSKH*SDHQGY
Trigger: ATATCCTTGGTGATCACTGCAGTGTTTGGAGTTGTG...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATACACAACTCCAAACACTaGAGTGATCACCAAGGATAT +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWIHNSKH*SDHQGY
Trigger: ATATCCTTGGTGATCACTGCAGTGTTTGGAGTTGTG...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTAGTGACAAATTTGTATaGATCCAGCCTGATTTCAAT +
Preference number: 4 (lower is better)
Translates to: ETGSENYILASCNVNLTLSDKFV*IQPDFN
Trigger: ATTGAAATCAGGCTGGATGCATACAAATTTGTCACT...AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTTGGTTCTACATGATTTaGACAGGGGCCATATTTGTA +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCWFYMI*TGAIFV
Trigger: TACAAATATGGCCCCTGTGCAAATCATGTAGAACCA...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTTGTAGTCTCTGTACCTaGAATAACCAGATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCCSLCT*NNQIFP
Trigger: TGGGAAAATCTGGTTATTGCAGGTACAGAGACTACA...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCTTTCTCCGTTGTTGTTaGAAATGTTCCAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSFLRCC*KCSSSA
Trigger: GGCTGAACTGGAACATTTGCAACAACAACGGAGAAA...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATATACATCCTGGCTTCCTaGAATGTCAATCTAACCCTT +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIYILAS*NVNLTL
Trigger: AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTA...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATATACCTTCATTATATTTaGCTTTGGCAGCCCACACAC +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIYLHYI*LWQPTH
Trigger: GTGTGTGGGCTGCCAAAGGCAAATATAATGAAGGTA...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525139.5
ENST00000672621.1
CDS-3UTR CCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGAACCATTGGGTTTTaGGCCATCCAGTTTTTGATT +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPRTIGF*AIQFLI
Trigger: AATCAAAAACTGGATGGCCCAAAACCCAATGGTTCT...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAACAAATATGTCACCTTaGCATAGATACAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPTNMSP*HRYSCR
Trigger: ACGACAGCTGTATCTATGCCAAGGTGACATATTTGT...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTTTTATTGTATTTTCCTaGGTGGCCTACGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCFIVFS*VAYESS
Trigger: GGAAGATTCGTAGGCCACCCAGGAAAATACAATAAA...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCAGCATATTATACATGTaGTTTGCCAAGTATGCCTTC +
Preference number: 4 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCSILYM*FAKYAF
Trigger: GAAGGCATACTTGGCAAACCACATGTATAATATGCT...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAAGCATAAATCCCCTGTaGCACAGATCCATAATCTCA +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVISINPL*HRSIIS
Trigger: TGAGATTATGGATCTGTGCCACAGGGGATTTATGCT...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGGTGTTGCAGAGCATCTaGCCTCAGTTTTCCCGAATA +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMVLQSI*PQFSRI
Trigger: TATTCGGGAAAACTGAGGCCAGATGCTCTGCAACAC...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATCATTATATTTGCCTTTaGCAGCCCACACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDHYICL*QPTHSS
Trigger: AGAAGAGTGTGTGGGCTGCCAAAGGCAAATATAATG...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525139.5
ENST00000672621.1
CDS-3UTR CCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTCATTATATTTGCCTTTaGCAGCCCACACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSHYICL*QPTHSS
Trigger: AGAAGAGTGTGTGGGCTGCCAAAGGCAAATATAATG...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525139.5
ENST00000672621.1
CDS-3UTR CCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATACACAAAGCATTTGACTaGAGGGTTTTTAGCCTACTC +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWIHKAFD*RVFSLL
Trigger: GAGTAGGCTAAAAACCCTCCAGTCAAATGCTTTGTG...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR TCA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATATAAGTAGCGTGTTCTaGTTCATCCGTGTAATCCTT +
Preference number: 4 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDISSVF*FIRVIL
Trigger: AAGGATTACACGGATGAATCAGAACACGCTACTTAT...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR TCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTAGATGTCTGTTATTCTaGGGTCCATGGGTTTTAATG +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSRCLLF*GPWVLM
Trigger: CATTAAAACCCATGGACCTCAGAATAACAGACATCT...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCAGATGTCTGTTATTCTaGGGTCCATGGGTTTTAATG +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSRCLLF*GPWVLM
Trigger: CATTAAAACCCATGGACCTCAGAATAACAGACATCT...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATACATGAAGAATATTCCTaGGACAGAAACAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWIHEEYS*DRNKKT
Trigger: CGTCTTCTTGTTTCTGTCTCAGGAATATTCTTCATG...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATGAAGAATATTCCTaGGACAGAAACAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIHEEYS*DRNKKT
Trigger: CGTCTTCTTGTTTCTGTCTCAGGAATATTCTTCATG...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATATCACCAAGGATATCATaGAGAATATTCCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVISPRIS*RIFLRQ
Trigger: CTGTCTCAGGAATATTCTTCATGATATCCTTGGTGA...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACGCTGTTTTCCCACTCTaGTTCTGTTCGAGGATATTC +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYAVFPL*FCSRIF
Trigger: GAATATCCTCGAACAGAATCAGAGTGGGAAAACAGC...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTTACAAATGCATTGGTaGTCACAGCCAATATACCGA +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSLQMHW*SQPIYR
Trigger: TCGGTATATTGGCTGTGATCACCAATGCATTTGTAA...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGAGGATAGGCTATTGTTaGCATATCCCTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKRIGYC*HIPSSN
Trigger: ATTGCTTGAAGGGATATGTCAACAATAGCCTATCCT...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTCAGGTATGCGATGAATaGCTTAATCCCAAAAACAAG +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGQVCDE*LNPKNK
Trigger: CTTGTTTTTGGGATTAAGTCATTCATCGCATACCTG...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTTACCAACCTGTAAACTaGAGGGATGTAGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCYQPVN*RDVEFW
Trigger: CCAGAACTCTACATCCCTTCAGTTTACAGGTTGGTA...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATCAAACCAACAATTGCTaGAGGAATCAACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDQTNNC*RNQHSS
Trigger: ACTGGAATGTTGATTCCTGCAGCAATTGTTGGTTTG...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATATGGTTCTACATGATTTaGACAGGGGCCATATTTGTA +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWIWFYMI*TGAIFV
Trigger: TACAAATATGGCCCCTGTGCAAATCATGTAGAACCA...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCTGTAGTCTCTGTACCTaGAATAACCAGATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSCSLCT*NNQIFP
Trigger: TGGGAAAATCTGGTTATTGCAGGTACAGAGACTACA...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGTGTAGTCTCTGTACCTaGAATAACCAGATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKCSLCT*NNQIFP
Trigger: TGGGAAAATCTGGTTATTGCAGGTACAGAGACTACA...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTCTAGCAGCAAGGATATaGCAGTATTGTAAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCLAARI*QYCKVN
Trigger: GTTTACTTTACAATACTGGCATATCCTTGCTGCTAG...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTCCTAGCATTCAAAGTTaGCATCATTTCTTCCCATTA +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCPSIQS*HHFFPL
Trigger: TAATGGGAAGAAATGATGGCAACTTTGAATGCTAGG...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGATTATACATGTGGTTTaGCAAGTATGCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKIIHVV*QVCLPP
Trigger: AGGAGGAAGGCATACTTGGCAAACCACATGTATAAT...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGCCATGCCTGGCTTGTaGACATTTACATGGAAATCT +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCAMPGL*TFTWKS
Trigger: AGATTTCCATGTAAATGTGCACAAGCCAGGCATGGC...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATCTAAAACTAACACACTaGAAGGGGCTGTCAGTATTT +
Preference number: 4 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDLKLTH*KGLSVF
Trigger: AAATACTGACAGCCCCTTGCAGTGTGTTAGTTTTAG...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAGTTGTATCTCATCATaGAGTCACTCAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDSCISS*SHSAAF
Trigger: AAATGCTGCTGAGTGACTGCATGATGAGATACAACT...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAGCACAGCGTGTCCCATaGAATGTGAATTTTAATAAA +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPAQRVP*NVNFNK
Trigger: TTTATTAAAATTCACATTCCATGGGACACGCTGTGC...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTAGAACCATTGGGTTTTaGGCCATCCAGTTTTTGATT +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSRTIGF*AIQFLI
Trigger: AATCAAAAACTGGATGGCCCAAAACCCAATGGTTCT...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTTTCCATTTTCATATTTaGTGCGTTCCAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCFHFHI*CVPACD
Trigger: ATCACATGCTGGAACGCACCAAATATGAAAATGGAA...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTACAAATATGTCACCTTaGCATAGATACAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGTNMSP*HRYSCR
Trigger: ACGACAGCTGTATCTATGCCAAGGTGACATATTTGT...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATATTTATTGTATTTTCCTaGGTGGCCTACGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWIFIVFS*VAYESS
Trigger: GGAAGATTCGTAGGCCACCCAGGAAAATACAATAAA...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCTTTATTGTATTTTCCTaGGTGGCCTACGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSFIVFS*VAYESS
Trigger: GGAAGATTCGTAGGCCACCCAGGAAAATACAATAAA...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGATTTTAAGCCATGCCTaGCTTGTGCACATTTACATG +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKILSHA*LVHIYM
Trigger: CATGTAAATGTGCACAAGCCAGGCATGGCTTAAAAT...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACCCAAACAAAAATCGCTaGGGTCAGCAAATGAACATC +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYPNKNR*GQQMNI
Trigger: GATGTTCATTTGCTGACCTCAGCGATTTTTGTTTGG...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTCAAGCCTTCTGCTCTaGGGTTCTTTTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMSSLLL*GSFQMC
Trigger: ACACATTTGAAAAGAACCTCAGAGCAGAAGGCTTGA...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTCACCAAAGTATAGCCTaGTTAAATCCAGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCHQSIA*LNPEAD
Trigger: ATCAGCCTCTGGATTTAATCAGGCTATACTTTGGTG...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACCACCAAAGTATAGCCTaGTTAAATCCAGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYHQSIA*LNPEAD
Trigger: ATCAGCCTCTGGATTTAATCAGGCTATACTTTGGTG...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGCACCAAAGTATAGCCTaGTTAAATCCAGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMHQSIA*LNPEAD
Trigger: ATCAGCCTCTGGATTTAATCAGGCTATACTTTGGTG...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTCTTGATTTTATGTCGTaGCCACCAGTTCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCLDFMS*PPVLDQ
Trigger: TTGATCCAGAACTGGTGGTCACGACATAAAATCAAG...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACCAATCATTTTCCCACTaGGGTATGGAAGCATCATGT +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYQSFSH*GMEASC
Trigger: ACATGATGCTTCCATACCTCAGTGGGAAAATGATTG...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ACTAAAGGTGATGTGCAACTCTTCAACTGCATAGTCAATGTAAAGCAGCATAAACAGGTATGCGATGAATaGCTTAATCCCAAAAACAAG +
Preference number: 4 (lower is better)
Translates to: TKGDVQLFNCIVNVKQHKQVCDE*LNPKNK
Trigger: CTTGTTTTTGGGATTAAGTCATTCATCGCATACCTG...TTTATGCTGCTTTACATTGACTATGCAGTTGAAGAGTTGCACATCACCTTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp CTGTGGAACAGACATACTCATAGATACAGAGTTGACGTTGAAATAGAAATTCCAAACCTCTCTGGAATCTaGATGGAAGAGTTTCACATA +
Preference number: 4 (lower is better)
Translates to: LWNRHTHRYRVDVEIEIPNLSGI*MEEFHI
Trigger: TATGTGAAACTCTTCCATTCAGATTCCAGAGAGGTT...TGGAATTTCTATTTCAACGTCAACTCTGTATCTATGAGTATGTCTGTTCCACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTCCTCAGTATTAACTTaGTCTGCTTTGTCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMSSVLT*SALSVE
Trigger: CTCCACTGACAAAGCAGAGCAAGTTAATACTGAGGA...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR GCA 90 bp CTGTGGAACAGACATACTCATAGATACAGAGTTGACGTTGAAATAGAAATTCCACAGAGGTCCACTGGATaGTATGTAATTCATGTCATT +
Preference number: 4 (lower is better)
Translates to: LWNRHTHRYRVDVEIEIPQRSTG*YVIHVI
Trigger: AATGACATGAATTACATAGCATCCAGTGGACCTCTG...TGGAATTTCTATTTCAACGTCAACTCTGTATCTATGAGTATGTCTGTTCCACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTAATAAGTTTGCATCCTaGCCATTGATTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCNKFAS*PLICSS
Trigger: GGAGGAGCAAATCAATGGGCAGGATGCAAACTTATT...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ACTAAAGGTGATGTGCAACTCTTCAACTGCATAGTCAATGTAAAGCAGCATAAACAAACCAACAATTGCTaGAGGAATCAACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: TKGDVQLFNCIVNVKQHKQTNNC*RNQHSS
Trigger: ACTGGAATGTTGATTCCTGCAGCAATTGTTGGTTTG...TTTATGCTGCTTTACATTGACTATGCAGTTGAAGAGTTGCACATCACCTTTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATAGCAGATGTTGCAAACTaGCAGTATTGTTTGATGAAA +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWIADVAN*QYCLMK
Trigger: TTTCATCAAACAATACTGGCAGTTTGCAACATCTGC...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTGCAGATGTTGCAAACTaGCAGTATTGTTTGATGAAA +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGADVAN*QYCLMK
Trigger: TTTCATCAAACAATACTGGCAGTTTGCAACATCTGC...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CATGATATTTTAAGCCATGCCTGGCTTGTGCACATTTACATGGAAATCTGTCTTGCAGATGTTGCAAACTaGCAGTATTGTTTGATGAAA +
Preference number: 4 (lower is better)
Translates to: HDILSHAWLVHIYMEICLADVAN*QYCLMK
Trigger: TTTCATCAAACAATACTGGCAGTTTGCAACATCTGC...AAGACAGATTTCCATGTAAATGTGCACAAGCCAGGCATGGCTTAAAATATCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACAGCAGCAGCAGATGTTaGAAACTGCCAGTATTGTTT +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYSSSRC*KLPVLF
Trigger: AAACAATACTGGCAGTTTGCAACATCTGCTGCTGCT...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTGACAAATTTGTATaGATCCAGCCTGATTTCAAT +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPSDKFV*IQPDFN
Trigger: ATTGAAATCAGGCTGGATGCATACAAATTTGTCACT...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTAATAGCAATTACAAATaGATTGGTGATCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCNSNYK*IGDHSQ
Trigger: TTGGCTGTGATCACCAATGCATTTGTAATTGCTATT...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGCTAGCAGCAAGGATATaGCAGTATTGTAAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKLAARI*QYCKVN
Trigger: GTTTACTTTACAATACTGGCATATCCTTGCTGCTAG...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGCCTAGCATTCAAAGTTaGCATCATTTCTTCCCATTA +
Preference number: 4 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKPSIQS*HHFFPL
Trigger: TAATGGGAAGAAATGATGGCAACTTTGAATGCTAGG...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTTACATCCTGGCTTCCTaGAATGTCAATCTAACCCTT +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCYILAS*NVNLTL
Trigger: AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTA...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGCCTACTCTCTAAATaGCAGAGTTTGAATAATCAT +
Preference number: 4 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPSLLSK*QSLNNH
Trigger: ATGATTATTCAAACTCTGGCATTTAGAGAGTAGGCT...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR CCA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCGCACAGCGTGTCCCATaGAATGTGAATTTTAATAAA +
Preference number: 4 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSAQRVP*NVNFNK
Trigger: TTTATTAAAATTCACATTCCATGGGACACGCTGTGC...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTGCACAGCGTGTCCCATaGAATGTGAATTTTAATAAA +
Preference number: 4 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSAQRVP*NVNFNK
Trigger: TTTATTAAAATTCACATTCCATGGGACACGCTGTGC...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp ACTAAAGGTGATGTGCAACTCTTCAACTGCATAGTCAATGTAAAGCAGCATAAATTTATTGTATTTTCCTaGGTGGCCTACGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: TKGDVQLFNCIVNVKQHKFIVFS*VAYESS
Trigger: GGAAGATTCGTAGGCCACCCAGGAAAATACAATAAA...TTTATGCTGCTTTACATTGACTATGCAGTTGAAGAGTTGCACATCACCTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTCTGAGAATTACATCCTaGCTTCCTGCAATGTCAATC +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCLRITS*LPAMSI
Trigger: GATTGACATTGCAGGAAGCCAGGATGTAATTCTCAG...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp CTGTGGAACAGACATACTCATAGATACAGAGTTGACGTTGAAATAGAAATTCCAATTTTAAGCCATGCCTaGCTTGTGCACATTTACATG +
Preference number: 4 (lower is better)
Translates to: LWNRHTHRYRVDVEIEIPILSHA*LVHIYM
Trigger: CATGTAAATGTGCACAAGCCAGGCATGGCTTAAAAT...TGGAATTTCTATTTCAACGTCAACTCTGTATCTATGAGTATGTCTGTTCCACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTACAATAGCAAAAACTaGTGTCAGAGCTGCATAAAC +
Preference number: 4 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGYNSKN*CQSCIN
Trigger: GTTTATGCAGCTCTGACACCAGTTTTTGCTATTGTA...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGAGATGTCTGTTATTCTaGGGTCCATGGGTTTTAATG +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMRCLLF*GPWVLM
Trigger: CATTAAAACCCATGGACCTCAGAATAACAGACATCT...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTCACCAAGGATATCATaGAGAATATTCCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMSPRIS*RIFLRQ
Trigger: CTGTCTCAGGAATATTCTTCATGATATCCTTGGTGA...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTTACAAATGCATTGGTaGTCACAGCCAATATACCGA +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMLQMHW*SQPIYR
Trigger: TCGGTATATTGGCTGTGATCACCAATGCATTTGTAA...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGCAGGTATGCGATGAATaGCTTAATCCCAAAAACAAG +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMQVCDE*LNPKNK
Trigger: CTTGTTTTTGGGATTAAGTCATTCATCGCATACCTG...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR TCA 90 bp ACTAAAGGTGATGTGCAACTCTTCAACTGCATAGTCAATGTAAAGCAGCATAAACTTAGATTTTTGGTTTaGCTACTAAAGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: TKGDVQLFNCIVNVKQHKLRFLV*LLKVMC
Trigger: GCACATCACCTTTAGTAGTCAAACCAAAAATCTAAG...TTTATGCTGCTTTACATTGACTATGCAGTTGAAGAGTTGCACATCACCTTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGCAGAGGTCCACTGGATaGTATGTAATTCATGTCATT +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMQRSTG*YVIHVI
Trigger: AATGACATGAATTACATAGCATCCAGTGGACCTCTG...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACCAACATCAAGCCTTCTaGTCTGAGGTTCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYQHQAF*SEVLFK
Trigger: TTTGAAAAGAACCTCAGAGCAGAAGGCTTGATGTTG...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGCAACATCAAGCCTTCTaGTCTGAGGTTCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMQHQAF*SEVLFK
Trigger: TTTGAAAAGAACCTCAGAGCAGAAGGCTTGATGTTG...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp CATGATATTTTAAGCCATGCCTGGCTTGTGCACATTTACATGGAAATCTGTCTTAGTGACAAATTTGTATaGATCCAGCCTGATTTCAAT +
Preference number: 4 (lower is better)
Translates to: HDILSHAWLVHIYMEICLSDKFV*IQPDFN
Trigger: ATTGAAATCAGGCTGGATGCATACAAATTTGTCACT...AAGACAGATTTCCATGTAAATGTGCACAAGCCAGGCATGGCTTAAAATATCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATAATCCCAAAAACAAGGTaGTCAAACACAATAATGAAG +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWIIPKTR*SNTIMK
Trigger: CTTCATTATTGTGTTTGAGCACCTTGTTTTTGGGAT...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATTATACATGTGGTTTaGCAAGTATGCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYIIHVV*QVCLPP
Trigger: AGGAGGAAGGCATACTTGGCAAACCACATGTATAAT...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACGTGCAACTCTTCAACTaGATAGTCAATGTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYVQLFN*IVNVKQ
Trigger: CTGCTTTACATTGACTATGCAGTTGAAGAGTTGCAC...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATATTATCTAAAAGTACGTaGACAGACTCAGACAATTAC +
Preference number: 4 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWILSKST*TDSDNY
Trigger: GTAATTGTCTGAGTCTGTGCACGTACTTTTAGATAA...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp CTGTGGAACAGACATACTCATAGATACAGAGTTGACGTTGAAATAGAAATTCCATACAATAGCAAAAACTaGTGTCAGAGCTGCATAAAC +
Preference number: 4 (lower is better)
Translates to: LWNRHTHRYRVDVEIEIPYNSKN*CQSCIN
Trigger: GTTTATGCAGCTCTGACACCAGTTTTTGCTATTGTA...TGGAATTTCTATTTCAACGTCAACTCTGTATCTATGAGTATGTCTGTTCCACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTCTGTGGCCCTAATTTaGAAAAGATGTTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMSVALI*KRCWLM
Trigger: CATCAACCAACATCTTTTCCAAATTAGGGCCACAGA...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR GCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACGACTGTGGCCCATATTaGCATAAAAATAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYDCGPY*HKNSKE
Trigger: TTCTTTGCTATTTTTATGGCAATATGGGCCACAGTC...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGCTAGCAGCAAGGATATaGCAGTATTGTAAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMLAARI*QYCKVN
Trigger: GTTTACTTTACAATACTGGCATATCCTTGCTGCTAG...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTCCTAGCATTCAAAGTTaGCATCATTTCTTCCCATTA +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCPSIQS*HHFFPL
Trigger: TAATGGGAAGAAATGATGGCAACTTTGAATGCTAGG...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTTCCATTTTCATATTTaGTGCGTTCCAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMFHFHI*CVPACD
Trigger: ATCACATGCTGGAACGCACCAAATATGAAAATGGAA...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACTTCCATTTTCATATTTaGTGCGTTCCAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYFHFHI*CVPACD
Trigger: ATCACATGCTGGAACGCACCAAATATGAAAATGGAA...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CCA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTAGCATATTATACATGTaGTTTGCCAAGTATGCCTTC +
Preference number: 4 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCSILYM*FAKYAF
Trigger: GAAGGCATACTTGGCAAACCACATGTATAATATGCT...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
3UTR CAA 72 bp AATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATaGTTTTCTTCCCTACAAGTCTGGATATTTCAAATC +
Preference number: 4 (lower is better)
Translates to: NVNLTLFKVVKS*FSSLQVWIFQI
Trigger: GATTTGAAATATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR GCA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATCCCAAAAACAAGGTaGTCAAACACAATAATGAAG +
Preference number: 4 (lower is better)
Translates to: DISNPRDGCDTFPSSILYIPKTR*SNTIMK
Trigger: CTTCATTATTGTGTTTGAGCACCTTGTTTTTGGGAT...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS GCA 90 bp TGGTGGACCATTTTCACTCTGCGCGTCCCAGCCGGCTTAGGGAGCTaGCCGAGAGGGAGGCGGAGGAACAGTAGCCAGACTCTAGACGCT +
Preference number: 5 (lower is better)
Translates to: WWTIFTLRVPAGLGS*PRGRRRNSSQTLDA
Trigger: AGCGTCTAGAGTCTGGCTACTGTTCCTCCGCCTCCCTCTCGGGCAGCTCCCTAAGCCGGCTGGGACGCGCAGAGTGAAAATGGTCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000531646.1
CDS-3UTR CAA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTAGATACCTATGTCAGTaGCTCGGGCTGGCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSRYLCQ*LGLAKA
Trigger: GGCCTTTGCCAGCCCGAGCAACTGACATAGGTATCT...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CCTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCATCAGCTTGGAACAACTaGTCAAGGCAGACTGCATGC +
Preference number: 5 (lower is better)
Translates to: PHHPLSHYTAVDGRQSSPSAWNN*SRQTAC
Trigger: GCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGA...TGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp CTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAACCCATTACACTGCAGTaGATGGAAGGCAGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: LTTLFPITLQLMEGRVLQPITLQ*MEGRVL
Trigger: GAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGG...TTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS TCA 90 bp TGCTCTGCTTTGTCAGTGGAGATTAAGGTTATAGATGTGGGAGCCTaGGATTCACTCTCGGTTGACTGGAAGAGGGAAGTAGACTGGCTC +
Preference number: 5 (lower is better)
Translates to: CSALSVEIKVIDVGA*DSLSVDWKREVDWL
Trigger: GAGCCAGTCTACTTCCCTCTTCCAGTCAACCGAGAGTGAATCTCAGGCTCCCACATCTATAACCTTAATCTCCACTGACAAAGCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531646.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATTGCAGGGAGCAGTTCTaGTCACAGAGAGGGCACATA +
Preference number: 5 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYCREQF*SQRGHI
Trigger: TATGTGCCCTCTCTGTGACAAGAACTGCTCCCTGCA...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGGTCATGTAGACCCTTaGGTACGTCTGGAATCAGGT +
Preference number: 5 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSGHVDP*VRLESG
Trigger: ACCTGATTCCAGACGTACCAAAGGGTCTACATGACC...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTCCCATTACACTGCAGTaGATGGAAGGCAGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSPITLQ*MEGRVL
Trigger: GAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGG...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS TCA 90 bp TTATATTTGCCTTTGGCAGCCCACACACTCTTCTCAAGCTCACGATaGGAAAAGCACAACTTTTGCAGACCAGTCGGGACAGAACTGGAG +
Preference number: 5 (lower is better)
Translates to: LYLPLAAHTLFSSSR*EKHNFCRPVGTELE
Trigger: CTCCAGTTCTGTCCCGACTGGTCTGCAAAAGTTGTGCTTTTCTCATCGTGAGCTTGAGAAGAGTGTGTGGGCTGCCAAAGGCAAATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672621.1
CDS-3UTR CAA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAGATACCTATGTCAGTaGCTCGGGCTGGCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: ENYILASCNVNLTLFKVVRYLCQ*LGLAKA
Trigger: GGCCTTTGCCAGCCCGAGCAACTGACATAGGTATCT...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS TCA 90 bp CCTGAGACAGAAACAAGAAGACGAGTGACTTTGTCTGAGGAAGGCTaGTGTGGTTCAGGTTTTCCCGTGATGGGATTTACAATCTCCATC +
Preference number: 5 (lower is better)
Translates to: PETETRRRVTLSEEG*CGSGFPVMGFTISI
Trigger: GATGGAGATTGTAAATCCCATCACGGGAAAACCTGAACCACATCAGCCTTCCTCAGACAAAGTCACTCGTCTTCTTGTTTCTGTCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATACTGCTTCGAGTAGCATaGCTGAAGAAGGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSILLRVA*LKKVSL
Trigger: TAAAGACACCTTCTTCAGCAATGCTACTCGAAGCAG...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCGGTCATGTAGACCCTTaGGTACGTCTGGAATCAGGT +
Preference number: 5 (lower is better)
Translates to: FPITLQLMEGRVLQAYISGHVDP*VRLESG
Trigger: ACCTGATTCCAGACGTACCAAAGGGTCTACATGACC...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAATGCAGCATTCAGAAGTaGTATCTCATCATGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LTTLFPITLQLMEGRVLQCSIQK*YLIMQS
Trigger: TGACTGCATGATGAGATACAACTTCTGAATGCTGCA...TTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp CTCACCACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGTGCTAAGGATCATTTaGGAAGAATGTGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: LTTLFPITLQLMEGRVLQVLRII*EECAAF
Trigger: GAATGCTGCACATTCTTCCAAAATGATCCTTAGCAC...TTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTGGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTAAGAACCATTGGGTTTaGGGCCATCCAGTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSKNHWV*GHPVFD
Trigger: ATCAAAAACTGGATGGCCCAAAACCCAATGGTTCTT...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGAACTTGTCAAGAACCATaGGGTTTTGGGCCATCCAGT +
Preference number: 5 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRTCQEP*GFGPSS
Trigger: ACTGGATGGCCCAAAACCCAATGGTTCTTGACAAGT...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTACTGCTTCGAGTAGCATaGCTGAAGAAGGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: LPETGSENYILASCNVNLLLRVA*LKKVSL
Trigger: TAAAGACACCTTCTTCAGCAATGCTACTCGAAGCAG...TAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGCGCACAAACCAACAATaGCTGCAGGAATCAACATTC +
Preference number: 5 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPERTNQQ*LQESTF
Trigger: GAATGTTGATTCCTGCAGCAATTGTTGGTTTGTGCG...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTTGCAGGGAGCAGTTCTaGTCACAGAGAGGGCACATA +
Preference number: 5 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCCREQF*SQRGHI
Trigger: TATGTGCCCTCTCTGTGACAAGAACTGCTCCCTGCA...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATAAGATACCTATGTCAGTaGCTCGGGCTGGCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWIRYLCQ*LGLAKA
Trigger: GGCCTTTGCCAGCCCGAGCAACTGACATAGGTATCT...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATACTGTCAGACAAATGTaGCTGTTCTGTGGCCCTAAT +
Preference number: 5 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYTVRQM*LFCGPN
Trigger: ATTAGGGCCACAGAACAGCAACATTTGTCTGACAGT...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATAACTGGCTCAAGCTCTTaGAGTAAGCGTAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWITGSSS*SKRSSG
Trigger: CCCAGAGCTACGCTTACTCAAAGAGCTTGAGCCAGT...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR CAA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTTTAACTTGCTCTGCTTaGTCAGTGGAGATTAAGGTT +
Preference number: 5 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSLTCSA*SVEIKV
Trigger: AACCTTAATCTCCACTGACAAAGCAGAGCAAGTTAA...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp ATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTCTTTTTGCCATCTTaGAACAGAGGTCCACTGGAT +
Preference number: 5 (lower is better)
Translates to: ITLQLMEGRVLQAYISLRLFLPS*NRGPLD
Trigger: ATCCAGTGGACCTCTGTTCAAAGATGGCAAAAAGAG...TCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGAGAATTCTCTTTTTGCCATCTTaGAACAGAGGTCCACTGGAT +
Preference number: 5 (lower is better)
Translates to: MEGRVLQAYISLRLVLRILFLPS*NRGPLD
Trigger: ATCCAGTGGACCTCTGTTCAAAGATGGCAAAAAGAG...AATTCTCAGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGAGAATTCTGCTTCGAGTAGCATaGCTGAAGAAGGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: MEGRVLQAYISLRLVLRILLRVA*LKKVSL
Trigger: TAAAGACACCTTCTTCAGCAATGCTACTCGAAGCAG...AATTCTCAGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCCAGCAGCAGCAGATGTaGCAAACTGCCAGTATTGTT +
Preference number: 5 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCQQQQM*QTASIV
Trigger: AACAATACTGGCAGTTTGCAACATCTGCTGCTGCTG...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCATCATGTATTCCCCGCTaGATTTTATGTCGTGACCAC +
Preference number: 5 (lower is better)
Translates to: YISLRLVLRITSWLPAMSSCIPR*ILCRDH
Trigger: GTGGTCACGACATAAAATCAAGCGGGGAATACATGA...TGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAGGTCATGTAGACCCTTaGGTACGTCTGGAATCAGGT +
Preference number: 5 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPGHVDP*VRLESG
Trigger: ACCTGATTCCAGACGTACCAAAGGGTCTACATGACC...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGTTTTCTCCGTTGTTGTaGCAAATGTTCCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPEFSPLL*QMFQFS
Trigger: GCTGAACTGGAACATTTGCAACAACAACGGAGAAAA...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATAACTTTTTCTCCGTTGTaGTTGCAAATGTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSITFSPL*LQMFQF
Trigger: GAACTGGAACATTTGCAACAACAACGGAGAAAAAGT...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACCACTTTTTCTCCGTaGTTGTTGCAAATGTTCCAG +
Preference number: 5 (lower is better)
Translates to: HYTAVDGRQSSPSIYLPETTFSP*LLQMFQ
Trigger: CTGGAACATTTGCAACAACAACGGAGAAAAAGTGGT...CTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATTCTGTGGCCCTAATTaGGAAAAGATGTTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSIFCGPN*EKMLVD
Trigger: ATCAACCAACATCTTTTCCAAATTAGGGCCACAGAA...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp CTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAGTGCTAAGGATCATTTaGGAAGAATGTGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: LPETGSENYILASCNVNLVLRII*EECAAF
Trigger: GAATGCTGCACATTCTTCCAAAATGATCCTTAGCAC...TAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAGAAAAGCACAACTTTaGCAGACCAGTCGGGACAGA +
Preference number: 5 (lower is better)
Translates to: ENYILASCNVNLTLFKVVRKAQL*QTSRDR
Trigger: TCTGTCCCGACTGGTCTGCAAAAGTTGTGCTTTTCT...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672621.1
CDS TCA 90 bp TTTATAGATGAGATTCAAGAAAGACTTCTCACTTCTTCCATCATGTaGGGACACAGCAAGAAGGGTCATCAGTCGGGACAGAACTGGAGT +
Preference number: 5 (lower is better)
Translates to: FIDEIQERLLTSSIM*GHSKKGHQSGQNWS
Trigger: ACTCCAGTTCTGTCCCGACTGATGACCCTTCTTGCTGTGTCCTCACATGATGGAAGAAGTGAGAAGTCTTTCTTGAATCTCATCTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531798.1
CDS-3UTR CAA 90 bp ACTAAAGGTGATGTGCAACTCTTCAACTGCATAGTCAATGTAAAGCAGCATAAAACTGGCTCAAGCTCTTaGAGTAAGCGTAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: TKGDVQLFNCIVNVKQHKTGSSS*SKRSSG
Trigger: CCCAGAGCTACGCTTACTCAAAGAGCTTGAGCCAGT...TTTATGCTGCTTTACATTGACTATGCAGTTGAAGAGTTGCACATCACCTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp CTGTGGAACAGACATACTCATAGATACAGAGTTGACGTTGAAATAGAAATTCCAACTGGCTCAAGCTCTTaGAGTAAGCGTAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LWNRHTHRYRVDVEIEIPTGSSS*SKRSSG
Trigger: CCCAGAGCTACGCTTACTCAAAGAGCTTGAGCCAGT...TGGAATTTCTATTTCAACGTCAACTCTGTATCTATGAGTATGTCTGTTCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp GAAAGCTCTTCAGCTTGGAACAACTTGTCAAGGCAGACTGCATGCACATATATACTCTTTTTGCCATCTTaGAACAGAGGTCCACTGGAT +
Preference number: 5 (lower is better)
Translates to: ESSSAWNNLSRQTACTYILFLPS*NRGPLD
Trigger: ATCCAGTGGACCTCTGTTCAAAGATGGCAAAAAGAG...TATATATGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAACTTGTCAAGAACCATaGGGTTTTGGGCCATCCAGT +
Preference number: 5 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPTCQEP*GFGPSS
Trigger: ACTGGATGGCCCAAAACCCAATGGTTCTTGACAAGT...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTGAGAATTTCTGGAAAAGCTGACTaGTCAAGAACCATTGGGTTT +
Preference number: 5 (lower is better)
Translates to: MEGRVLQAYISLRLVLRISGKAD*SRTIGF
Trigger: AAACCCAATGGTTCTTGACAAGTCAGCTTTTCCAGA...AATTCTCAGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATTGATGAAATTCCACTaGAATGATGCAAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: HPLSHYTAVDGRQSSPSILMKFH*NDANCS
Trigger: GGAACAGTTTGCATCATTCAAGTGGAATTTCATCAA...TATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCTGAGACTGGTTCTTTGATGAAATTCCACTaGAATGATGCAAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: AVDGRQSSPSIYLPETGSLMKFH*NDANCS
Trigger: GGAACAGTTTGCATCATTCAAGTGGAATTTCATCAA...AGAACCAGTCTCAGGGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCACAGCAGCAGCAGATGTaGCAAACTGCCAGTATTGTT +
Preference number: 5 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPQQQQM*QTASIV
Trigger: AACAATACTGGCAGTTTGCAACATCTGCTGCTGCTG...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGAGATACCTATGTCAGTaGCTCGGGCTGGCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMRYLCQ*LGLAKA
Trigger: GGCCTTTGCCAGCCCGAGCAACTGACATAGGTATCT...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATGGTCATGTAGACCCTTaGGTACGTCTGGAATCAGGT +
Preference number: 5 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDGHVDP*VRLESG
Trigger: ACCTGATTCCAGACGTACCAAAGGGTCTACATGACC...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAACCACTTTTTCTCCGTaGTTGTTGCAAATGTTCCAG +
Preference number: 5 (lower is better)
Translates to: YISLRLVLRITSWLPAMSTTFSP*LLQMFQ
Trigger: CTGGAACATTTGCAACAACAACGGAGAAAAAGTGGT...TGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGCCCATTACACTGCAGTaGATGGAAGGCAGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKPITLQ*MEGRVL
Trigger: GAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGG...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATATCAGCTTGGAACAACTaGTCAAGGCAGACTGCATGC +
Preference number: 5 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVISAWNN*SRQTAC
Trigger: GCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGA...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCTCATTATATTTGCCTTaGGCAGCCCACACACTCTTC +
Preference number: 5 (lower is better)
Translates to: ENYILASCNVNLTLFKVVSLYLP*AAHTLF
Trigger: GAAGAGTGTGTGGGCTGCCAAAGGCAAATATAATGA...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672621.1
CDS-3UTR CAA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAAGCAAAACATGAGTaGGAAGCGTGCTCATGTCTG +
Preference number: 5 (lower is better)
Translates to: ENYILASCNVNLTLFKVVKAKHE*EACSCL
Trigger: CAGACATGAGCACGCTTCCAACTCATGTTTTGCTTT...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672621.1
CDS-3UTR CAA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCTGCTACACAAAGCATTaGACTGGAGGGTTTTTAGCC +
Preference number: 5 (lower is better)
Translates to: ENYILASCNVNLTLFKVVCYTKH*TGGFLA
Trigger: GGCTAAAAACCCTCCAGTCAAATGCTTTGTGTAGCA...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR CAA 90 bp GAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGAACCATTGGGTTTaGGGCCATCCAGTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: ENYILASCNVNLTLFKVVKNHWV*GHPVFD
Trigger: ATCAAAAACTGGATGGCCCAAAACCCAATGGTTCTT...GACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GAAAGCTCTTCAGCTTGGAACAACTTGTCAAGGCAGACTGCATGCACATATATATCTGGAAAAGCTGACTaGTCAAGAACCATTGGGTTT +
Preference number: 5 (lower is better)
Translates to: ESSSAWNNLSRQTACTYISGKAD*SRTIGF
Trigger: AAACCCAATGGTTCTTGACAAGTCAGCTTTTCCAGA...TATATATGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCACTGCTTCGAGTAGCATaGCTGAAGAAGGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPLLRVA*LKKVSL
Trigger: TAAAGACACCTTCTTCAGCAATGCTACTCGAAGCAG...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp AGTTGCCATCATTTCTTCCCATTAATGTTATCACCCCTAATGGGTAACAGGTGTCGCACAAACCAACAATaGCTGCAGGAATCAACATTC +
Preference number: 5 (lower is better)
Translates to: SCHHFFPLMLSPLMGNRCRTNQQ*LQESTF
Trigger: GAATGTTGATTCCTGCAGCAATTGTTGGTTTGTGCG...ACACCTGTTACCCATTAGGGGTGATAACATTAATGGGAAGAAATGATGGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACTGCAGGGAGCAGTTCTaGTCACAGAGAGGGCACATA +
Preference number: 5 (lower is better)
Translates to: DISNPRDGCDTFPSSILYCREQF*SQRGHI
Trigger: TATGTGCCCTCTCTGTGACAAGAACTGCTCCCTGCA...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTTGCAGGGAGCAGTTCTaGTCACAGAGAGGGCACATA +
Preference number: 5 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCCREQF*SQRGHI
Trigger: TATGTGCCCTCTCTGTGACAAGAACTGCTCCCTGCA...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTCAGCAGCAGCAGATGTaGCAAACTGCCAGTATTGTT +
Preference number: 5 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSQQQQM*QTASIV
Trigger: AACAATACTGGCAGTTTGCAACATCTGCTGCTGCTG...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCATCATGTATTCCCCGCTaGATTTTATGTCGTGACCAC +
Preference number: 5 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPSCIPR*ILCRDH
Trigger: GTGGTCACGACATAAAATCAAGCGGGGAATACATGA...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GAAAGCTCTTCAGCTTGGAACAACTTGTCAAGGCAGACTGCATGCACATATATATTGGTTCTACATGATTaGCACAGGGGCCATATTTGT +
Preference number: 5 (lower is better)
Translates to: ESSSAWNNLSRQTACTYILVLHD*HRGHIC
Trigger: ACAAATATGGCCCCTGTGCAAATCATGTAGAACCAA...TATATATGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp ACCCTCTTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATTCAAGCAATTTTCACTaGGTTCTACATGATTTGCAC +
Preference number: 5 (lower is better)
Translates to: TLFPITLQLMEGRVLQAYSSNFH*VLHDLH
Trigger: GTGCAAATCATGTAGAACCAAGTGAAAATTGCTTGA...ATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAAGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp AGCATATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATAAGGATAGGCTATTGTaGACATATCCCTTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: SIYLPETGSENYILASCNKDRLL*TYPFKQ
Trigger: TTGCTTGAAGGGATATGTCAACAATAGCCTATCCTT...ATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCAAGGATAGGCTATTGTaGACATATCCCTTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: FPITLQLMEGRVLQAYISKDRLL*TYPFKQ
Trigger: TTGCTTGAAGGGATATGTCAACAATAGCCTATCCTT...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GACAAATGTTGCTGTTCTGTGGCCCTAATTTGGAAAAGATGTTGGTTGATGTTACTCCTCAGTATTAACTaGCTCTGCTTTGTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: DKCCCSVALIWKRCWLMLLLSIN*LCFVSG
Trigger: TCCACTGACAAAGCAGAGCAAGTTAATACTGAGGAG...TAACATCAACCAACATCTTTTCCAAATTAGGGCCACAGAACAGCAACATTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGCTCCTCAGTATTAACTaGCTCTGCTTTGTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKLLSIN*LCFVSG
Trigger: TCCACTGACAAAGCAGAGCAAGTTAATACTGAGGAG...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR CAA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATCTCCTCAGTATTAACTaGCTCTGCTTTGTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDLLSIN*LCFVSG
Trigger: TCCACTGACAAAGCAGAGCAAGTTAATACTGAGGAG...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR CAA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTCTTTTTGCCATCTTaGAACAGAGGTCCACTGGAT +
Preference number: 5 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSLFLPS*NRGPLD
Trigger: ATCCAGTGGACCTCTGTTCAAAGATGGCAAAAAGAG...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCATCTGGAAAAGCTGACTaGTCAAGAACCATTGGGTTT +
Preference number: 5 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPSGKAD*SRTIGF
Trigger: AAACCCAATGGTTCTTGACAAGTCAGCTTTTCCAGA...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCGCACAAACCAACAATaGCTGCAGGAATCAACATTC +
Preference number: 5 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSRTNQQ*LQESTF
Trigger: GAATGTTGATTCCTGCAGCAATTGTTGGTTTGTGCG...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp AGCATATATCTCCCTGAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATCCTAGTTCCATGAAGTaGTTCCATATTTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SIYLPETGSENYILASCNPSSMK*FHICFK
Trigger: TTTGAAGCAAATATGGAACAACTTCATGGAACTAGG...ATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTCAGGGAGATATATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTTCCCATTACACTGCAGTTGATGGAAGGCAGAGTTCTCCAAGCATATATCTCCCCTAGTTCCATGAAGTaGTTCCATATTTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: FPITLQLMEGRVLQAYISPSSMK*FHICFK
Trigger: TTTGAAGCAAATATGGAACAACTTCATGGAACTAGG...GGAGATATATGCTTGGAGAACTCTGCCTTCCATCAACTGCAGTGTAATGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATTCATGTATTCCCCGCTaGATTTTATGTCGTGACCAC +
Preference number: 5 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDSCIPR*ILCRDH
Trigger: GTGGTCACGACATAAAATCAAGCGGGGAATACATGA...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCTCATGTATTCCCCGCTaGATTTTATGTCGTGACCAC +
Preference number: 5 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSSCIPR*ILCRDH
Trigger: GTGGTCACGACATAAAATCAAGCGGGGAATACATGA...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAAGGTCGTCAAGTCATaGTTTTCTTCCCTACAAGTC +
Preference number: 5 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPKVVKS*FSSLQV
Trigger: GACTTGTAGGGAAGAAAACAATGACTTGACGACCTT...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACTGTCAGACAAATGTaGCTGTTCTGTGGCCCTAAT +
Preference number: 5 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDTVRQM*LFCGPN
Trigger: ATTAGGGCCACAGAACAGCAACATTTGTCTGACAGT...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATATCATTATATTTGCCTTaGGCAGCCCACACACTCTTC +
Preference number: 5 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWISLYLP*AAHTLF
Trigger: GAAGAGTGTGTGGGCTGCCAAAGGCAAATATAATGA...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525139.5
ENST00000672621.1
CDS-3UTR CAA 90 bp GAGACTGGTTCTGAGAATTACATCCTGGCTTCCTGCAATGTCAATCTAACCCTTATTTGGAATCCTTCATaGCTGACAACAGTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: ETGSENYILASCNVNLTLIWNPS*LTTVSN
Trigger: ATTTGAGACTGTTGTCAGCAATGAAGGATTCCAAAT...AAGGGTTAGATTGACATTGCAGGAAGCCAGGATGTAATTCTCAGAACCAGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS GCA 90 bp TTTCACCGCCTGCTTTTTCCATTAACTAGAATGTTACATACTGAGTaGTACACAAAGCATTTGACTGGAGGGTTTTTAGCCTACTCTCTA +
Preference number: 5 (lower is better)
Translates to: FHRLLFPLTRMLHTE*YTKHLTGGFLAYSL
Trigger: TAGAGAGTAGGCTAAAAACCCTCCAGTCAAATGCTTTGTGTAGCACTCAGTATGTAACATTCTAGTTAATGGAAAAAGCAGGCGGTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR CAA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCAAGAACCATTGGGTTTaGGGCCATCCAGTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSKNHWV*GHPVFD
Trigger: ATCAAAAACTGGATGGCCCAAAACCCAATGGTTCTT...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTACTTGTCAAGAACCATaGGGTTTTGGGCCATCCAGT +
Preference number: 5 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCTCQEP*GFGPSS
Trigger: ACTGGATGGCCCAAAACCCAATGGTTCTTGACAAGT...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACACTTGTCAAGAACCATaGGGTTTTGGGCCATCCAGT +
Preference number: 5 (lower is better)
Translates to: DISNPRDGCDTFPSSILYTCQEP*GFGPSS
Trigger: ACTGGATGGCCCAAAACCCAATGGTTCTTGACAAGT...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATATCTGGAAAAGCTGACTaGTCAAGAACCATTGGGTTT +
Preference number: 5 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVISGKAD*SRTIGF
Trigger: AAACCCAATGGTTCTTGACAAGTCAGCTTTTCCAGA...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACCAGCAGCAGCAGATGTaGCAAACTGCCAGTATTGTT +
Preference number: 5 (lower is better)
Translates to: DISNPRDGCDTFPSSILYQQQQM*QTASIV
Trigger: AACAATACTGGCAGTTTGCAACATCTGCTGCTGCTG...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCTTGGTTCTACATGATTaGCACAGGGGCCATATTTGT +
Preference number: 5 (lower is better)
Translates to: SCNVNLTLFKVVKSLFSSLVLHD*HRGHIC
Trigger: ACAAATATGGCCCCTGTGCAAATCATGTAGAACCAA...GGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGGTTCTACATGATTaGCACAGGGGCCATATTTGT +
Preference number: 5 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGLVLHD*HRGHIC
Trigger: ACAAATATGGCCCCTGTGCAAATCATGTAGAACCAA...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTACATGGAAATCTGTCTTTCAAAACCTCACCACCCTCTTTCCCATTACACTGCTCAAGCAATTTTCACTaGGTTCTACATGATTTGCAC +
Preference number: 5 (lower is better)
Translates to: LHGNLSFKTSPPSFPLHCSSNFH*VLHDLH
Trigger: GTGCAAATCATGTAGAACCAAGTGAAAATTGCTTGA...GCAGTGTAATGGGAAAGAGGGTGGTGAGGTTTTGAAAGACAGATTTCCATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATTTTTCTCCGTTGTTGTaGCAAATGTTCCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDFSPLL*QMFQFS
Trigger: GCTGAACTGGAACATTTGCAACAACAACGGAGAAAA...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GACAAATGTTGCTGTTCTGTGGCCCTAATTTGGAAAAGATGTTGGTTGATGTTATTTTCTCCGTTGTTGTaGCAAATGTTCCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: DKCCCSVALIWKRCWLMLFSPLL*QMFQFS
Trigger: GCTGAACTGGAACATTTGCAACAACAACGGAGAAAA...TAACATCAACCAACATCTTTTCCAAATTAGGGCCACAGAACAGCAACATTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGTATTATACATGTGGTTaGCCAAGTATGCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKYYTCG*PSMPSS
Trigger: GGAGGAAGGCATACTTGGCAAACCACATGTATAATA...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CATGATATTTTAAGCCATGCCTGGCTTGTGCACATTTACATGGAAATCTGTCTTTATTATACATGTGGTTaGCCAAGTATGCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: HDILSHAWLVHIYMEICLYYTCG*PSMPSS
Trigger: GGAGGAAGGCATACTTGGCAAACCACATGTATAATA...AAGACAGATTTCCATGTAAATGTGCACAAGCCAGGCATGGCTTAAAATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAAGGTCGTCAAGTCATaGTTTTCTTCCCTACAAGTC +
Preference number: 5 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDKVVKS*FSSLQV
Trigger: GACTTGTAGGGAAGAAAACAATGACTTGACGACCTT...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GCTTCCTGCAATGTCAATCTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTAAGGTCGTCAAGTCATaGTTTTCTTCCCTACAAGTC +
Preference number: 5 (lower is better)
Translates to: ASCNVNLTLFKVVKSLFSKVVKS*FSSLQV
Trigger: GACTTGTAGGGAAGAAAACAATGACTTGACGACCTT...AGAAAACAATGACTTGACGACCTTAAAAAGGGTTAGATTGACATTGCAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATAAGAAAAGCACAACTTTaGCAGACCTGTGAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: LFSSLQVWIFQIPEMAVIRKAQL*QTCERE
Trigger: TTCTCTCTCACAGGTCTGCAAAAGTTGTGCTTTTCT...TATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525139.5
CDS-3UTR CAA 90 bp ATTGTTTTCTTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATATACCTTCATTATATTaGCCTTTGGCAGCCCACACA +
Preference number: 5 (lower is better)
Translates to: IVFFPTSLDISNPRDGCDIPSLY*PLAAHT
Trigger: TGTGTGGGCTGCCAAAGGCAAATATAATGAAGGTAT...ATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAAGAAAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525139.5
ENST00000672621.1
CDS TCA 90 bp ACAGTCAGAATTCTGAGTTCAGCTGCATTTGGAATCCTTCATTGCTaGCAACAGTCTCAAATGACAATCTTCTTTAAAGCACTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: TVRILSSAAFGILHC*QQSQMTIFFKALFS
Trigger: ACTGAAGAGTGCTTTAAAGAAGATTGTCATTTGAGACTGTTGTCAGCAATGAAGGATTCCAAATGCAGCTGAACTCAGAATTCTGACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS GCA 90 bp GTAATCAATTCTCTTTTTGCCATCTTTGAACAGAGGTCCACTGGATaGTATGTAATTCATGTCATTCACAGTCAGAATTCTGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: VINSLFAIFEQRSTG*YVIHVIHSQNSEFS
Trigger: GCTGAACTCAGAATTCTGACTGTGAATGACATGAATTACATAGCATCCAGTGGACCTCTGTTCAAAGATGGCAAAAAGAGAATTGATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS-3UTR CAA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGCGCACAAACCAACAATaGCTGCAGGAATCAACATTC +
Preference number: 5 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMRTNQQ*LQESTF
Trigger: GAATGTTGATTCCTGCAGCAATTGTTGGTTTGTGCG...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTCCCTACAAGTCTGGATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCATCAAGCAATTTTCACTaGGTTCTACATGATTTGCAC +
Preference number: 5 (lower is better)
Translates to: FPTSLDISNPRDGCDTFPSSNFH*VLHDLH
Trigger: GTGCAAATCATGTAGAACCAAGTGAAAATTGCTTGA...TGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATCCAGACTTGTAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTAAGGATAGGCTATTGTaGACATATCCCTTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: QIPEMAVIHFQVAYYTCGKDRLL*TYPFKQ
Trigger: TTGCTTGAAGGGATATGTCAACAATAGCCTATCCTT...ACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp AGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTGGTTTGCCAAGACTTTTTCTCCGTTGTaGTTGCAAATGTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: RDGCDTFPSSILYMWFAKTFSPL*LQMFQF
Trigger: GAACTGGAACATTTGCAACAACAACGGAGAAAAAGT...CTTGGCAAACCACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CTGTGGAACAGACATACTCATAGATACAGAGTTGACGTTGAAATAGAAATTCCATATTATACATGTGGTTaGCCAAGTATGCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LWNRHTHRYRVDVEIEIPYYTCG*PSMPSS
Trigger: GGAGGAAGGCATACTTGGCAAACCACATGTATAATA...TGGAATTTCTATTTCAACGTCAACTCTGTATCTATGAGTATGTCTGTTCCACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp ACTAAAGGTGATGTGCAACTCTTCAACTGCATAGTCAATGTAAAGCAGCATAAAAAGGTCGTCAAGTCATaGTTTTCTTCCCTACAAGTC +
Preference number: 5 (lower is better)
Translates to: TKGDVQLFNCIVNVKQHKKVVKS*FSSLQV
Trigger: GACTTGTAGGGAAGAAAACAATGACTTGACGACCTT...TTTATGCTGCTTTACATTGACTATGCAGTTGAAGAGTTGCACATCACCTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp CATGATATTTTAAGCCATGCCTGGCTTGTGCACATTTACATGGAAATCTGTCTTTTCTGTGGCCCTAATTaGGAAAAGATGTTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: HDILSHAWLVHIYMEICLFCGPN*EKMLVD
Trigger: ATCAACCAACATCTTTTCCAAATTAGGGCCACAGAA...AAGACAGATTTCCATGTAAATGTGCACAAGCCAGGCATGGCTTAAAATATCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp ACTAAAGGTGATGTGCAACTCTTCAACTGCATAGTCAATGTAAAGCAGCATAAATGCAGCATTCAGAAGTaGTATCTCATCATGCAGTCA +
Preference number: 5 (lower is better)
Translates to: TKGDVQLFNCIVNVKQHKCSIQK*YLIMQS
Trigger: TGACTGCATGATGAGATACAACTTCTGAATGCTGCA...TTTATGCTGCTTTACATTGACTATGCAGTTGAAGAGTTGCACATCACCTTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTAAGAACCATTGGGTTTaGGGCCATCCAGTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCKNHWV*GHPVFD
Trigger: ATCAAAAACTGGATGGCCCAAAACCCAATGGTTCTT...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CTAACCCTTTTTAAGGTCGTCAAGTCATTGTTTTCTTCCCTACAAGTCTGGATATTGATGAAATTCCACTaGAATGATGCAAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: LTLFKVVKSLFSSLQVWILMKFH*NDANCS
Trigger: GGAACAGTTTGCATCATTCAAGTGGAATTTCATCAA...TATCCAGACTTGTAGGGAAGAAAACAATGACTTGACGACCTTAAAAAGGGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp CATGATATTTTAAGCCATGCCTGGCTTGTGCACATTTACATGGAAATCTGTCTTCCTAGTTCCATGAAGTaGTTCCATATTTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: HDILSHAWLVHIYMEICLPSSMK*FHICFK
Trigger: TTTGAAGCAAATATGGAACAACTTCATGGAACTAGG...AAGACAGATTTCCATGTAAATGTGCACAAGCCAGGCATGGCTTAAAATATCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACTTGGTTCTACATGATTaGCACAGGGGCCATATTTGT +
Preference number: 5 (lower is better)
Translates to: DISNPRDGCDTFPSSILYLVLHD*HRGHIC
Trigger: ACAAATATGGCCCCTGTGCAAATCATGTAGAACCAA...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GACAAATGTTGCTGTTCTGTGGCCCTAATTTGGAAAAGATGTTGGTTGATGTTATCAAGCAATTTTCACTaGGTTCTACATGATTTGCAC +
Preference number: 5 (lower is better)
Translates to: DKCCCSVALIWKRCWLMLSSNFH*VLHDLH
Trigger: GTGCAAATCATGTAGAACCAAGTGAAAATTGCTTGA...TAACATCAACCAACATCTTTTCCAAATTAGGGCCACAGAACAGCAACATTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000672621.1
CDS-3UTR CAA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGACCACTTTTTCTCCGTaGTTGTTGCAAATGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMTTFSP*LLQMFQ
Trigger: CTGGAACATTTGCAACAACAACGGAGAAAAAGTGGT...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACACCACTTTTTCTCCGTaGTTGTTGCAAATGTTCCAG +
Preference number: 5 (lower is better)
Translates to: DISNPRDGCDTFPSSILYTTFSP*LLQMFQ
Trigger: CTGGAACATTTGCAACAACAACGGAGAAAAAGTGGT...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACTATTATACATGTGGTTaGCCAAGTATGCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: DISNPRDGCDTFPSSILYYYTCG*PSMPSS
Trigger: GGAGGAAGGCATACTTGGCAAACCACATGTATAATA...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTATACCTTCATTATATTaGCCTTTGGCAGCCCACACA +
Preference number: 5 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCIPSLY*PLAAHT
Trigger: TGTGTGGGCTGCCAAAGGCAAATATAATGAAGGTAT...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525139.5
ENST00000672621.1
CDS GCA 90 bp ATAAACAAAACGTGGGATGTAATCAGAAGTAATAGCAATTACAAATaGATTGGTGATCACAGCCAATATACCGATTCCTTCGAGAATTCC +
Preference number: 5 (lower is better)
Translates to: INKTWDVIRSNSNYK*IGDHSQYTDSFENS
Trigger: GGAATTCTCGAAGGAATCGGTATATTGGCTGTGATCACCAATGCATTTGTAATTGCTATTACTTCTGATTACATCCCACGTTTTGTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTTTAACTTGCTCTGCTTaGTCAGTGGAGATTAAGGTT +
Preference number: 5 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCLTCSA*SVEIKV
Trigger: AACCTTAATCTCCACTGACAAAGCAGAGCAAGTTAA...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000672621.1
CDS-3UTR CAA 90 bp GATATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACAAGGATAGGCTATTGTaGACATATCCCTTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: DISNPRDGCDTFPSSILYKDRLL*TYPFKQ
Trigger: TTGCTTGAAGGGATATGTCAACAATAGCCTATCCTT...GTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAATATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp ATTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGACTTTTTCTCCGTTGTaGTTGCAAATGTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: ISNPRDGCDTFPSSILYMTFSPL*LQMFQF
Trigger: GAACTGGAACATTTGCAACAACAACGGAGAAAAAGT...CATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTACTTTTTCTCCGTTGTaGTTGCAAATGTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCTFSPL*LQMFQF
Trigger: GAACTGGAACATTTGCAACAACAACGGAGAAAAAGT...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS-3UTR CAA 90 bp TTTCAAATCCCAGAGATGGCTGTGATACATTTCCAAGTAGCATATTATACATGTCCTAGTTCCATGAAGTaGTTCCATATTTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: FQIPEMAVIHFQVAYYTCPSSMK*FHICFK
Trigger: TTTGAAGCAAATATGGAACAACTTCATGGAACTAGG...ACATGTATAATATGCTACTTGGAAATGTATCACAGCCATCTCTGGGATTTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS GCA 72 bp ATTTTCACTCTGCGCGTCCCAGCCGGCTTAGGGAGCTaGCCGAGAGGGAGGCGGAGGAACAGTAGCCAGACT +
Preference number: 6 (lower is better)
Translates to: IFTLRVPAGLGS*PRGRRRNSSQT
Trigger: AGTCTGGCTACTGTTCCTCCGCCTCCCTCTCGGGCAGCTCCCTAAGCCGGCTGGGACGCGCAGAGTGAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000531646.1
CDS TCA 72 bp GAGGTGATAGTGTCTGGAGGTGGGGGCTTTGGCATGTaGTTAGGTCATGGGGGCAGAGATCTCACGAATAGA +
Preference number: 6 (lower is better)
Translates to: EVIVSGGGGFGM*LGHGGRDLTNR
Trigger: TCTATTCGTGAGATCTCTGCCCCCATGACCTAATCACATGCCAAAGCCCCCACCTCCAGACACTATCACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531798.1
CDS TCA 72 bp CCTTTGGCAGCCCACACACTCTTCTCAAGCTCACGATaGGAAAAGCACAACTTTTGCAGACCAGTCGGGACA +
Preference number: 6 (lower is better)
Translates to: PLAAHTLFSSSR*EKHNFCRPVGT
Trigger: TGTCCCGACTGGTCTGCAAAAGTTGTGCTTTTCTCATCGTGAGCTTGAGAAGAGTGTGTGGGCTGCCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672621.1
CDS TCA 72 bp GGTTATAGATGTGGGAGCCTGAGATTCACTCTCGGTTaGCTGGAAGAGGGAAGTAGACTGGCTCAAGCTCTT +
Preference number: 6 (lower is better)
Translates to: GYRCGSLRFTLG*LEEGSRLAQAL
Trigger: AAGAGCTTGAGCCAGTCTACTTCCCTCTTCCAGTCAACCGAGAGTGAATCTCAGGCTCCCACATCTATAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531646.1
ENST00000672621.1
CDS TCA 72 bp TTCTCACCAAAGTATAGCCTGATTAAATCCAGAGGCTaGTGCTTATACCACATTCCCCAGCGTGCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: FSPKYSLIKSRG*CLYHIPQRAQR
Trigger: GCGCTGGGCACGCTGGGGAATGTGGTATAAGCATCAGCCTCTGGATTTAATCAGGCTATACTTTGGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000529242.1
ENST00000531568.1
ENST00000672621.1
CDS TCA 72 bp CCTTTGGCAGCCCACACACTCTTCTCAAGCTCACGATaGGAAAAGCACAACTTTTGCAGACCTGTGAGAGAG +
Preference number: 6 (lower is better)
Translates to: PLAAHTLFSSSR*EKHNFCRPVRE
Trigger: CTCTCTCACAGGTCTGCAAAAGTTGTGCTTTTCTCATCGTGAGCTTGAGAAGAGTGTGTGGGCTGCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525139.5
CDS CAA 72 bp ATACAGCTGTCGTTGAGTCTCTGCAGGGAGCAGTTCTaGTCACAGAGAGGGCACATAAAGACTTCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: IQLSLSLCREQF*SQRGHIKTSVA
Trigger: AGCCACTGAAGTCTTTATGTGCCCTCTCTGTGACAAGAACTGCTCCCTGCAGAGACTCAACGACAGCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000529242.1
ENST00000531568.1
ENST00000672621.1
CDS TCA 72 bp CATACCTTTTTGCTGTTTAAAGGACTGAATGGAGCCTaGATGGTGGACCATTTTCACTCTGCGCGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: HTFLLFKGLNGA*MVDHFHSARPS
Trigger: GCTGGGACGCGCAGAGTGAAAATGGTCCACCATTCAGGCTCCATTCAGTCCTTTAAACAGCAAAAAGGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000531646.1
CDS TCA 72 bp CCCACTGAGGTATGGAAGCATCATGTATTCCCCGCTTaGTTTTATGTCGTGACCACCAGTTCTGGATCAACG +
Preference number: 6 (lower is better)
Translates to: PTEVWKHHVFPA*FYVVTTSSGST
Trigger: CGTTGATCCAGAACTGGTGGTCACGACATAAAATCAAGCGGGGAATACATGATGCTTCCATACCTCAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS TCA 72 bp GAGATTCAAGAAAGACTTCTCACTTCTTCCATCATGTaGGGACACAGCAAGAAGGGTCATCAGTCGGGACAG +
Preference number: 6 (lower is better)
Translates to: EIQERLLTSSIM*GHSKKGHQSGQ
Trigger: CTGTCCCGACTGATGACCCTTCTTGCTGTGTCCTCACATGATGGAAGAAGTGAGAAGTCTTTCTTGAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531798.1
CDS TCA 72 bp TTGTCAGTGGAGATTAAGGTTATAGATGTGGGAGCCTaGGATTCACTCTCGGTTGACTGGAAGAGGGAAGTA +
Preference number: 6 (lower is better)
Translates to: LSVEIKVIDVGA*DSLSVDWKREV
Trigger: TACTTCCCTCTTCCAGTCAACCGAGAGTGAATCTCAGGCTCCCACATCTATAACCTTAATCTCCACTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531646.1
ENST00000672621.1
CDS TCA 72 bp CGTGCCCAGCGCTCATATAATAGATGTCTGTTATTCTaGGGTCCATGGGTTTTAATGGGCTGGCTACTTTTG +
Preference number: 6 (lower is better)
Translates to: RAQRSYNRCLLF*GPWVLMGWLLL
Trigger: CAAAAGTAGCCAGCCCATTAAAACCCATGGACCTCAGAATAACAGACATCTATTATATGAGCGCTGGGCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000529242.1
ENST00000531568.1
ENST00000672621.1
CDS TCA 72 bp GAAACAAGAAGACGAGTGACTTTGTCTGAGGAAGGCTaGTGTGGTTCAGGTTTTCCCGTGATGGGATTTACA +
Preference number: 6 (lower is better)
Translates to: ETRRRVTLSEEG*CGSGFPVMGFT
Trigger: TGTAAATCCCATCACGGGAAAACCTGAACCACATCAGCCTTCCTCAGACAAAGTCACTCGTCTTCTTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS TCA 72 bp AGGTTCATGGGCTGCAGATTCCAATCATTTTCCCACTaGGGTATGGAAGCATCATGTATTCCCCGCTTGATT +
Preference number: 6 (lower is better)
Translates to: RFMGCRFQSFSH*GMEASCIPRLI
Trigger: AATCAAGCGGGGAATACATGATGCTTCCATACCTCAGTGGGAAAATGATTGGAATCTGCAGCCCATGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS GCA 72 bp CATGACAACCAGGCGGTACACCACAACTCCAAACACTaGAGTGATCACCAAGGATATCATGAAGAATATTCC +
Preference number: 6 (lower is better)
Translates to: HDNQAVHHNSKH*SDHQGYHEEYS
Trigger: GGAATATTCTTCATGATATCCTTGGTGATCACTGCAGTGTTTGGAGTTGTGGTGTACCGCCTGGTTGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS CAA 72 bp GAGAGTTCAGTCAAACAGGGTAAAGCAAAACATGAGTaGGAAGCGTGCTCATGTCTGAAGCCTTCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: ESSVKQGKAKHE*EACSCLKPSGE
Trigger: TTCTCCTGAAGGCTTCAGACATGAGCACGCTTCCAACTCATGTTTTGCTTTACCCTGTTTGACTGAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531798.1
ENST00000672621.1
CDS CAA 90 bp GCAGCAGATGTTGCAAACTGCCAGTATTGTTTGATGAAATTCCACTaGAATGATGCAAACTGTTCCATGACAACCAGGCGGTACACCACA +
Preference number: 6 (lower is better)
Translates to: AADVANCQYCLMKFH*NDANCSMTTRRYTT
Trigger: TGTGGTGTACCGCCTGGTTGTCATGGAACAGTTTGCATCATTCAAGTGGAATTTCATCAAACAATACTGGCAGTTTGCAACATCTGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS TCA 72 bp TGTCTGAGGAAGGCTGATGTGGTTCAGGTTTTCCCGTaGTGGGATTTACAATCTCCATCTTGTAATACTTGG +
Preference number: 6 (lower is better)
Translates to: CLRKADVVQVFP*WDLQSPSCNTW
Trigger: CCAAGTATTACAAGATGGAGATTGTAAATCCCATCACGGGAAAACCTGAACCACATCAGCCTTCCTCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS CAA 90 bp GAATCACCAGAGAGTTCAGTCAAACAGGGTAAAGCAAAACATGAGTaGGAAGCGTGCTCATGTCTGAAGCCTTCAGGAGAAAAATTATCC +
Preference number: 6 (lower is better)
Translates to: ESPESSVKQGKAKHE*EACSCLKPSGEKLS
Trigger: GGATAATTTTTCTCCTGAAGGCTTCAGACATGAGCACGCTTCCAACTCATGTTTTGCTTTACCCTGTTTGACTGAACTCTCTGGTGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531798.1
ENST00000672621.1
CDS TCA 72 bp AATCCTTATCTTTTCCTAGGGCCAAACAAAAATCGCTaGGGTCAGCAAATGAACATCTCAGCACAGAGTCGT +
Preference number: 6 (lower is better)
Translates to: NPYLFLGPNKNR*GQQMNISAQSR
Trigger: ACGACTCTGTGCTGAGATGTTCATTTGCTGACCTCAGCGATTTTTGTTTGGCCCTAGGAAAAGATAAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531646.1
ENST00000672621.1
CDS CAA 72 bp GTTGCAAACTGCCAGTATTGTTTGATGAAATTCCACTaGAATGATGCAAACTGTTCCATGACAACCAGGCGG +
Preference number: 6 (lower is better)
Translates to: VANCQYCLMKFH*NDANCSMTTRR
Trigger: CCGCCTGGTTGTCATGGAACAGTTTGCATCATTCAAGTGGAATTTCATCAAACAATACTGGCAGTTTGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS TCA 72 bp ACCCTTTGGTACGTCTGGAATCAGGTATGCGATGAATaGCTTAATCCCAAAAACAAGGTGCTCAAACACAAT +
Preference number: 6 (lower is better)
Translates to: TLWYVWNQVCDE*LNPKNKVLKHN
Trigger: ATTGTGTTTGAGCACCTTGTTTTTGGGATTAAGTCATTCATCGCATACCTGATTCCAGACGTACCAAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS GCA 72 bp TGGAATGTGAATTTTAATAAACATGATATCGGGGCTTaGAATAGCTGGCTCCTTCTCCAACATCAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: WNVNFNKHDIGA*NSWLLLQHQAF
Trigger: GAAGGCTTGATGTTGGAGAAGGAGCCAGCTATTGCAAGCCCCGATATCATGTTTATTAAAATTCACATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS CAA 90 bp TTGATACAGACAGCAGCAGCAGATGTTGCAAACTGCCAGTATTGTTaGATGAAATTCCACTTGAATGATGCAAACTGTTCCATGACAACC +
Preference number: 6 (lower is better)
Translates to: LIQTAAADVANCQYC*MKFHLNDANCSMTT
Trigger: GGTTGTCATGGAACAGTTTGCATCATTCAAGTGGAATTTCATCAAACAATACTGGCAGTTTGCAACATCTGCTGCTGCTGTCTGTATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS CAA 90 bp CGAGGCAAGGCAGGGATCTCCGAGACGGTTTTAACGAAGTTTCTTTaGTTATCTCACTCTTGCTTATATTCATACCTTCATTATATTTGC +
Preference number: 6 (lower is better)
Translates to: RGKAGISETVLTKFL*LSHSCLYSYLHYIC
Trigger: GCAAATATAATGAAGGTATGAATATAAGCAAGAGTGAGATAACAAAAGAAACTTCGTTAAAACCGTCTCGGAGATCCCTGCCTTGCCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525139.5
ENST00000672621.1
CDS TCA 72 bp CAAGCTCACTCAGGTCAAAGAAGGATAGGCTATTGTTaGCATATCCCTTCAAGCAATTTTCACTTGGTTCTA +
Preference number: 6 (lower is better)
Translates to: QAHSGQRRIGYC*HIPSSNFHLVL
Trigger: TAGAACCAAGTGAAAATTGCTTGAAGGGATATGTCAACAATAGCCTATCCTTCTTTGACCTGAGTGAGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS CAA 72 bp ACTAGAATGTTACATACTGAGTGCTACACAAAGCATTaGACTGGAGGGTTTTTAGCCTACTCTCTAAATGCC +
Preference number: 6 (lower is better)
Translates to: TRMLHTECYTKH*TGGFLAYSLNA
Trigger: GGCATTTAGAGAGTAGGCTAAAAACCCTCCAGTCAAATGCTTTGTGTAGCACTCAGTATGTAACATTCTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS GCA 72 bp TCTCTTTTTGCCATCTTTGAACAGAGGTCCACTGGATaGTATGTAATTCATGTCATTCACAGTCAGAATTCT +
Preference number: 6 (lower is better)
Translates to: SLFAIFEQRSTG*YVIHVIHSQNS
Trigger: AGAATTCTGACTGTGAATGACATGAATTACATAGCATCCAGTGGACCTCTGTTCAAAGATGGCAAAAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531568.1
CDS CCA 72 bp TACGGATACCCACTTTTGATATTCCATTTTCATATTTaGTGCGTTCCAGCATGTGATAGACTATTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: YGYPLLIFHFHI*CVPACDRLFCF
Trigger: GAAGCAGAATAGTCTATCACATGCTGGAACGCACCAAATATGAAAATGGAATATCAAAAGTGGGTATCCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS CAA 72 bp GCAGGGATCTCCGAGACGGTTTTAACGAAGTTTCTTTaGTTATCTCACTCTTGCTTATATTCATACCTTCAT +
Preference number: 6 (lower is better)
Translates to: AGISETVLTKFL*LSHSCLYSYLH
Trigger: ATGAAGGTATGAATATAAGCAAGAGTGAGATAACAAAAGAAACTTCGTTAAAACCGTCTCGGAGATCCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525139.5
ENST00000672621.1
CDS GCA 72 bp AAATTGATACAGACAGCAGCAGCAGATGTTGCAAACTaGCAGTATTGTTTGATGAAATTCCACTTGAATGAT +
Preference number: 6 (lower is better)
Translates to: KLIQTAAADVAN*QYCLMKFHLND
Trigger: ATCATTCAAGTGGAATTTCATCAAACAATACTGGCAGTTTGCAACATCTGCTGCTGCTGTCTGTATCAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS GCA 72 bp GATTATGAAATTGATACAGACAGCAGCAGCAGATGTTaGAAACTGCCAGTATTGTTTGATGAAATTCCACTT +
Preference number: 6 (lower is better)
Translates to: DYEIDTDSSSRC*KLPVLFDEIPL
Trigger: AAGTGGAATTTCATCAAACAATACTGGCAGTTTGCAACATCTGCTGCTGCTGTCTGTATCAATTTCATAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000672621.1
CDS CAA 72 bp GCAGGGATCTCCGAGACGGTTTTAACGAAGTTTCTTTaGTTATCTCACTCTTGCTTATATTCATACCTTTTT +
Preference number: 6 (lower is better)
Translates to: AGISETVLTKFL*LSHSCLYSYLF
Trigger: AAAAAGGTATGAATATAAGCAAGAGTGAGATAACAAAAGAAACTTCGTTAAAACCGTCTCGGAGATCCCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256737.8
ENST00000531646.1
CDS TCA 72 bp AAACCAAGATGTAATCAATTCTCTTTTTGCCATCTTTaGACAGAGGTCCACTGGATGCTATGTAATTCATGT +
Preference number: 6 (lower is better)
Translates to: KPRCNQFSFCHL*TEVHWMLCNSC
Trigger: ACATGAATTACATAGCATCCAGTGGACCTCTGTTCAAAGATGGCAAAAAGAGAATTGATTACATCTTGGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256737.8
ENST00000525139.5
ENST00000531568.1
ENST00000531646.1
ENST00000672621.1