RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000047617

Ensembl transcript IDs: ENST00000327087.12, ENST00000356134.9, ENST00000536751.1, ENST00000538154.5, ENST00000540543.1, ENST00000541487.1, ENST00000541874.1, ENST00000542326.5, ENST00000544988.1, ENST00000545860.1, ENST00000546188.5, ENST00000612575.1, ENST00000650848.1, ENST00000682330.1

Found 710 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTaGATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGCAGGCT +
Preference number: 1 (lower is better)
Translates to: LQTDSTPCGCRNMLT*MCVSLLPCPPLLQA
Trigger: AGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR GCA 90 bp ACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTaGGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGCAGGCTGAACTG +
Preference number: 1 (lower is better)
Translates to: TDSTPCGCRNMLTCM*VSLLPCPPLLQAEL
Trigger: CAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR CCA 90 bp AGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTaGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCA +
Preference number: 1 (lower is better)
Translates to: SSKRFCDVKWRQAQV*TFAPYYQVQRLHHS
Trigger: TGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCTGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: PQGTWECSRCLRLWGGETCACLC*RALLCC
Trigger: GCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACA...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCGCATGTGCGTGTCTCTaGTGCCGTGCCCTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: PQGTWECSRCLRLWGGETACACL*CRALLC
Trigger: GCAGAGGAGGGCACGGCAGCAGAGACACGCACATGC...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCATGCTTACGTGCATGTaGGTGTCTCTGCTGCCGTGC +
Preference number: 2 (lower is better)
Translates to: PQGTWECSRCLRLWGGETMLTCM*VSLLPC
Trigger: GCACGGCAGCAGAGACACGCACATGCACGTAAGCAT...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCTGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCCACLC*RALLCC
Trigger: GCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACA...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGGAACATGCTTACGTaGATGTGCGTGTCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWRNMLT*MCVSLL
Trigger: CAGCAGAGACACGCACATGCACGTAAGCATGTTCCT...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGATCAAGCCAGGCCCCTaGAGACAGACAGCACGCCAT +
Preference number: 2 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPEIKPGP*RQTARH
Trigger: ATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGAT...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR TCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCAATGCTCGCGGTGCCTaGGACTCTGGGGTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCNARGA*DSGVER
Trigger: TCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATT...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATGCATGTGCGTGTCTCTaGTGCCGTGCCCTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHACACL*CRALLC
Trigger: GCAGAGGAGGGCACGGCAGCAGAGACACGCACATGC...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGATGCTTACGTGCATGTaGGTGTCTCTGCTGCCGTGC +
Preference number: 2 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPEMLTCM*VSLLPC
Trigger: GCACGGCAGCAGAGACACGCACATGCACGTAAGCAT...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTCGGTGCCTGAGACTCTaGGGTGGAGAGACCCCAGTG +
Preference number: 2 (lower is better)
Translates to: VETSPGLDLCTLLSGPAARCLRL*GGETPV
Trigger: CACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCG...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR CCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATCGGTGCCTGAGACTCTaGGGTGGAGAGACCCCAGTG +
Preference number: 2 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHRCLRL*GGETPV
Trigger: CACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCG...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR TCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCAATGCTCGCGGTGCCTaGGACTCTGGGGTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGNARGA*DSGVER
Trigger: TCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATT...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALCACLC*RALLCC
Trigger: GCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACA...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGGCATGTGCGTGTCTCTaGTGCCGTGCCCTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALACACL*CRALLC
Trigger: GCAGAGGAGGGCACGGCAGCAGAGACACGCACATGC...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTGGGAATGCTCGCGGTaGCTGAGACTCTGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHWECSR*LRLWGG
Trigger: TCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCA...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCCAGGGTACATGGGAATaGTCGCGGTGCCTGAGACTC +
Preference number: 2 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCQGTWE*SRCLRL
Trigger: GAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTG...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR CCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGCGGTGCCTGAGACTCTaGGGTGGAGAGACCCCAGTG +
Preference number: 2 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALRCLRL*GGETPV
Trigger: CACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCG...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTTGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCCACLC*RALLCC
Trigger: GCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACA...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTGGGAATGCTCGCGGTaGCTGAGACTCTGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNWECSR*LRLWGG
Trigger: TCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCA...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCCAGGGTACATGGGAATaGTCGCGGTGCCTGAGACTC +
Preference number: 2 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGQGTWE*SRCLRL
Trigger: GAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTG...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGTGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWCACLC*RALLCC
Trigger: GCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACA...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCATGCTTACGTGCATGTaGGTGTCTCTGCTGCCGTGC +
Preference number: 2 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGMLTCM*VSLLPC
Trigger: GCACGGCAGCAGAGACACGCACATGCACGTAAGCAT...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR TCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGAATGCTCGCGGTGCCTaGGACTCTGGGGTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGNARGA*DSGVER
Trigger: TCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATT...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTATGCTTACGTGCATGTaGGTGTCTCTGCTGCCGTGC +
Preference number: 2 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLMLTCM*VSLLPC
Trigger: GCACGGCAGCAGAGACACGCACATGCACGTAAGCAT...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTATCAAGCCAGGCCCCTaGAGACAGACAGCACGCCAT +
Preference number: 2 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCIKPGP*RQTARH
Trigger: ATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGAT...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR CCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGCGGTGCCTGAGACTCTaGGGTGGAGAGACCCCAGTG +
Preference number: 2 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKRCLRL*GGETPV
Trigger: CACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCG...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR TCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCAATGCTCGCGGTGCCTaGGACTCTGGGGTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTNARGA*DSGVER
Trigger: TCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATT...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR TCA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACGGGATGCTGTGCTCCTaGCTGCATTTCTCTTACAGC +
Preference number: 2 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNGMLCS*LHFSYS
Trigger: GCTGTAAGAGAAATGCAGTCAGGAGCACAGCATCCC...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR TCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATCAGCCCCACTGCAAGTaGCTCAGTTTTCTTGTAGTG +
Preference number: 2 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHQPHCK*LSFLVV
Trigger: CACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTG...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR TCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTTTAATTTGCATCTGCTaGGACTGTGGCAGCCCCACT +
Preference number: 2 (lower is better)
Translates to: VETSPGLDLCTLLSGPAALICIC*DCGSPT
Trigger: AGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAA...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTAGGAACATGCTTACGTaGATGTGCGTGTCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: VETSPGLDLCTLLSGPAARNMLT*MCVSLL
Trigger: CAGCAGAGACACGCACATGCACGTAAGCATGTTCCT...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTATCAAGCCAGGCCCCTaGAGACAGACAGCACGCCAT +
Preference number: 2 (lower is better)
Translates to: FASAETVAAPLQVTQFSCIKPGP*RQTARH
Trigger: ATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGAT...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACATCAAGCCAGGCCCCTaGAGACAGACAGCACGCCAT +
Preference number: 2 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYIKPGP*RQTARH
Trigger: ATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGAT...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR CCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCGTGCCCCAGGGTACATaGGAATGCTCGCGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIVPQGT*ECSRCL
Trigger: CAGGCACCGCGAGCATTCCCATGTACCCTGGGGCAC...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR TCA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACCAGCCCCACTGCAAGTaGCTCAGTTTTCTTGTAGTG +
Preference number: 2 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNQPHCK*LSFLVV
Trigger: CACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTG...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACATGCTTACGTGCATGTaGGTGTCTCTGCTGCCGTGC +
Preference number: 2 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYMLTCM*VSLLPC
Trigger: GCACGGCAGCAGAGACACGCACATGCACGTAAGCAT...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTAGGAACATGCTTACGTaGATGTGCGTGTCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLRNMLT*MCVSLL
Trigger: CAGCAGAGACACGCACATGCACGTAAGCATGTTCCT...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCTGGGAATGCTCGCGGTaGCTGAGACTCTGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIWECSR*LRLWGG
Trigger: TCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCA...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATATAGTAAGTAGGGGATaGTGTGCTCCTGACTGCATT +
Preference number: 2 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHIVSRG*CAPDCI
Trigger: AATGCAGTCAGGAGCACAGCATCCCCTACTTACTAT...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGCATGTGCGTGTCTCTaGTGCCGTGCCCTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQACACL*CRALLC
Trigger: GCAGAGGAGGGCACGGCAGCAGAGACACGCACATGC...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGAGGAACATGCTTACGTaGATGTGCGTGTCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWRNMLT*MCVSLL
Trigger: CAGCAGAGACACGCACATGCACGTAAGCATGTTCCT...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTATAGTAAGTAGGGGATaGTGTGCTCCTGACTGCATT +
Preference number: 2 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCIVSRG*CAPDCI
Trigger: AATGCAGTCAGGAGCACAGCATCCCCTACTTACTAT...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCAGGAACATGCTTACGTaGATGTGCGTGTCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIRNMLT*MCVSLL
Trigger: CAGCAGAGACACGCACATGCACGTAAGCATGTTCCT...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAACAGGGTACATGGGAATaGTCGCGGTGCCTGAGACTC +
Preference number: 2 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQQGTWE*SRCLRL
Trigger: GAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTG...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR-3UTR GCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTATAGTAAGTAGGGGATaGTGTGCTCCTGACTGCATT +
Preference number: 2 (lower is better)
Translates to: FASAETVAAPLQVTQFSCIVSRG*CAPDCI
Trigger: AATGCAGTCAGGAGCACAGCATCCCCTACTTACTAT...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR CCA 72 bp CAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTaGGGTGGAGAGACCCCAGTGGGGTTCCAATCCCTC +
Preference number: 3 (lower is better)
Translates to: QGTWECSRCLRL*GGETPVGFQSL
Trigger: GAGGGATTGGAACCCCACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR GCA 72 bp GGTGTAGGAACATGCTTACGTGCATGTGCGTGTCTCTaGTGCCGTGCCCTCCTCTGCTGCAGGCTGAACTGC +
Preference number: 3 (lower is better)
Translates to: GVGTCLRACACL*CRALLCCRLNC
Trigger: GCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR GCA 72 bp GACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTaGATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: DSTPCGCRNMLT*MCVSLLPCPPL
Trigger: CAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR CCA 72 bp ATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATaGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGA +
Preference number: 3 (lower is better)
Translates to: MMVKYKRVPQGT*ECSRCLRLWGG
Trigger: TCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR TCA 72 bp TGCACCATTCAGCCTTGTAACTTAATTTGCATCTGCTaGGACTGTGGCAGCCCCACTGCAAGTGACTCAGTT +
Preference number: 3 (lower is better)
Translates to: CTIQPCNLICIC*DCGSPTASDSV
Trigger: AACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAAGTTACAAGGCTGAATGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR TCA 72 bp GGTTATCTGCATTTAGCTCCAAACGTTTTTGTGACGTaGAGTGGAGACAAGCCCAGGTTTGGACCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: GYLHLAPNVFVT*SGDKPRFGPLH
Trigger: GTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAATGCAGATAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
3UTR GCA 72 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTaGACCATTCAGCCTTGTAACTTAATTTGCATCTGC +
Preference number: 3 (lower is better)
Translates to: FGPLHLTIRSSG*TIQPCNLICIC
Trigger: GCAGATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGTCTCTGGCCAGCACCTaGCACGGGGCGTGTATCCGG +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWSLAST*HGACIR
Trigger: CCGGATACACGCCCCGTGGCAGGTGCTGGCCAGAGA...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGTGGCTGCCCGGCTCCTaGTTCGATCCCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWWLPGS*FDPHLL
Trigger: CAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCA...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCCCATGTTTGGGGCCCTaGCCCCCTCTGGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: PQGTWECSRCLRLWGGETPCLGP*PPLDPA
Trigger: GGCAGGGTCCAGAGGGGGCCAGGGCCCCAAACATGG...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACAACAGGTGGCTGGCCTaGGCGGTCCCACAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: APGYMGMLAVPETLGWRDNRWLA*AVPQAE
Trigger: CTCAGCCTGTGGGACCGCGCAGGCCAGCCACCTGTT...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGTGGCCAGGGAAGCCTTaGGCCAGGTGCACCCCGCGT +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRWPGKP*ARCTPR
Trigger: ACGCGGGGTGCACCTGGCCCAAGGCTTCCCTGGCCA...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGATCGATCCCCACCTCCTaGGCTCCTCAGAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRSIPTS*APQSRL
Trigger: GAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGA...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCTCGATCCCCACCTCCTaGGCTCCTCAGAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PQGTWECSRCLRLWGGETSIPTS*APQSRL
Trigger: GAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGA...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCCCTCTGGACCCTGCCTaGGGGCTCAGCCGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCPLDPA*GLSRRG
Trigger: CCCACGCCGGCTGAGCCCTCAGGCAGGGTCCAGAGG...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCGCCCCCTCTGGACCCTaGCTGAGGGCTCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCAPSGP*LRAQPA
Trigger: CGCCGGCTGAGCCCTCAGGCAGGGTCCAGAGGGGGC...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGTCTCTGGCCAGCACCTaGCACGGGGCGTGTATCCGG +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRSLAST*HGACIR
Trigger: CCGGATACACGCCCCGTGGCAGGTGCTGGCCAGAGA...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGACTCGGGGCTGCAGGTaGGAGCTCAGCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWTRGCR*ELSFCR
Trigger: TCTGCAGAAGCTGAGCTCGCACCTGCAGCCCCGAGT...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGTCTGGAACTCGGGGCTaGAGGTGCGAGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWSGTRG*RCELSF
Trigger: GAAGCTGAGCTCGCACCTGCAGCCCCGAGTTCCAGA...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCGCGGTCCCACAGGCTaGGCTGAGGTTCCAGTAATC +
Preference number: 4 (lower is better)
Translates to: APGYMGMLAVPETLGWRDRGPTG*AEVPVI
Trigger: GATTACTGGAACCTCAGCTCAGCCTGTGGGACCGCG...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCCGCGGTCCCACAGGCTaGGCTGAGGTTCCAGTAATC +
Preference number: 4 (lower is better)
Translates to: PQGTWECSRCLRLWGGETRGPTG*AEVPVI
Trigger: GATTACTGGAACCTCAGCTCAGCCTGTGGGACCGCG...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGGCCCCCTCTGGACCCTaGCTGAGGGCTCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: QTDSTPCGCRNMLTCMCVAPSGP*LRAQPA
Trigger: CGCCGGCTGAGCCCTCAGGCAGGGTCCAGAGGGGGC...CACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGCTGTTGGAACCGCCCTaGAGACCTGGGGCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLLLEPP*RPGARG
Trigger: TCCCCGGGCCCCAGGTCTGCAGGGCGGTTCCAACAG...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCCTCGGGAGCAGGCTGTaGGCTTCAGGATCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: PQGTWECSRCLRLWGGETLGSRL*ASGSRA
Trigger: TGCACGAGATCCTGAAGCGCACAGCCTGCTCCCGAG...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACGAGGGCAAACACAGGTaGCAGGGGAAAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: APGYMGMLAVPETLGWRDEGKHR*QGKGGH
Trigger: GTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCCCTC...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGTGGCTGCCCGGCTCCTaGTTCGATCCCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWWLPGS*FDPHLL
Trigger: CAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCA...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGTGTCAAACAGGTGGCTaGCCTGCGCGGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRCQTGG*PARSHR
Trigger: CCTGTGGGACCGCGCAGGCCAGCCACCTGTTTGACA...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGTCGATCCCCACCTCCTaGGCTCCTCAGAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPESIPTS*APQSRL
Trigger: GAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGA...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGACTGCCCAGCTGGCTTTaGCCTGAAGGTGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRLPSWL*PEGAEL
Trigger: CAGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAG...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGGTGCCCCAGGGTACATaGGAATGCTCGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRVPQGT*ECSRCL
Trigger: CAGGCACCGCGAGCATTCCCATGTACCCTGGGGCAC...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGCCTCTGGACCCTGCCTaGGGGCTCAGCCGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALPLDPA*GLSRRG
Trigger: CCCACGCCGGCTGAGCCCTCAGGCAGGGTCCAGAGG...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGGCCCCCTCTGGACCCTaGCTGAGGGCTCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALAPSGP*LRAQPA
Trigger: CGCCGGCTGAGCCCTCAGGCAGGGTCCAGAGGGGGC...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGTCTGGAACTCGGGGCTaGAGGTGCGAGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRSGTRG*RCELSF
Trigger: GAAGCTGAGCTCGCACCTGCAGCCCCGAGTTCCAGA...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGAACAGGTGGCTGGCCTaGGCGGTCCCACAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMNRWLA*AVPQAE
Trigger: CTCAGCCTGTGGGACCGCGCAGGCCAGCCACCTGTT...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGTGTGAGTTTTCTGGCTaGGTCCCCTCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWCEFSG*VPSFSW
Trigger: CCAGCTGAAGGAGGGGACGCAGCCAGAAAACTCACA...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGCGTGCCCTCCTCTGCTaGAGGCTGAACTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRRALLC*RLNCSH
Trigger: GTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACG...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGACTGCTGTCCATGTTTaGGGCCCTGGCCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWTAVHV*GPGPLW
Trigger: CCAGAGGGGGCCAGGGCCCCAAACATGGACAGCAGT...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGTGTCAAACAGGTGGCTaGCCTGCGCGGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPECQTGG*PARSHR
Trigger: CCTGTGGGACCGCGCAGGCCAGCCACCTGTTTGACA...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGGGGTTGTCAAACAGGTaGCTGGCCTGCGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPEGLSNR*LACAVP
Trigger: TGGGACCGCGCAGGCCAGCCACCTGTTTGACAACCC...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGACATGAGACAGCCCCCTaGAGCACACTCTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRHETAP*STLFHA
Trigger: CGCATGGAAGAGTGTGCTCCAGGGGGCTGTCTCATG...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCGGAGTCGCCATGATGTaGACGCAGACCCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCGVAMM*TQTPPA
Trigger: GGCCGGCGGGGTCTGCGTCCACATCATGGCGACTCC...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546188.5
CDS-3UTR TCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTCCTCTGGACCCTGCCTaGGGGCTCAGCCGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCPLDPA*GLSRRG
Trigger: CCCACGCCGGCTGAGCCCTCAGGCAGGGTCCAGAGG...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCTCTGCAGAGCCGCGCTaGACTTCTTTGCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: PQGTWECSRCLRLWGGETSAEPR*TSLQCC
Trigger: GCAGCATTGCAAAGAAGTTCAGCGCGGCTCTGCAGA...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGATCCTCTGCTGCAGGCTaGACTGCTCACACATTGGTG +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRSSAAG*TAHTLV
Trigger: CACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGA...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCCAGAGCTGCTGCGGGTaGTCTCTCCACCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCQSCCG*SLHRRA
Trigger: AGCCCTGCGGTGGAGAGAGCACCCGCAGCAGCTCTG...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCCAGCATGAGGCTCCTTaGCTGTCTCCCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: PQGTWECSRCLRLWGGETQHEAP*LSPHWR
Trigger: TCTCCAATGGGGAGACAGGCAAGGAGCCTCATGCTG...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGACTCGGGGCTGCAGGTaGGAGCTCAGCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWTRGCR*ELSFCR
Trigger: TCTGCAGAAGCTGAGCTCGCACCTGCAGCCCCGAGT...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGCTCGGGAGCAGGCTGTaGGCTTCAGGATCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWLGSRL*ASGSRA
Trigger: TGCACGAGATCCTGAAGCGCACAGCCTGCTCCCGAG...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGCGTGCCCTCCTCTGCTaGAGGCTGAACTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTRALLC*RLNCSH
Trigger: GTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACG...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGTGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLCACLC*RALLCC
Trigger: GCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACA...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGTGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMCACLC*RALLCC
Trigger: GCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACA...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGATCAAGCCAGGCCCCTaGAGACAGACAGCACGCCAT +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRIKPGP*RQTARH
Trigger: ATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGAT...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGATCAGGTCCAGCGGCTaGACCATTCAGCCTTGTAAC +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWIRSSG*TIQPCN
Trigger: GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGAT...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACTCACGAGGTTCTGGCTaGCAGTTGCACGCTCACATG +
Preference number: 4 (lower is better)
Translates to: APGYMGMLAVPETLGWRDSRGSG*QLHAHM
Trigger: CATGTGAGCGTGCAACTGGCAGCCAGAACCTCGTGA...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR CCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGGGCCAGGATCTCTGTTaGAACCGCCCTGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTGQDLC*NRPADL
Trigger: CAGGTCTGCAGGGCGGTTCCAACAGAGATCCTGGCC...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGTGTCAAACAGGTGGCTaGCCTGCGCGGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMCQTGG*PARSHR
Trigger: CCTGTGGGACCGCGCAGGCCAGCCACCTGTTTGACA...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGGGGTTGTCAAACAGGTaGCTGGCCTGCGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLGLSNR*LACAVP
Trigger: TGGGACCGCGCAGGCCAGCCACCTGTTTGACAACCC...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGAGGGTTCGGGGCCCATaGCGGCTCTCGGTAATCCTT +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPERVRGP*RLSVIL
Trigger: AAGGATTACCGAGAGCCGCCATGGGCCCCGAACCCT...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGCTGCCCAGCTGGCTTTaGCCTGAAGGTGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTLPSWL*PEGAEL
Trigger: CAGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAG...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGCGGTGCCTGAGACTCTaGGGTGGAGAGACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLRCLRL*GGETPV
Trigger: CACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCG...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGGTGCCCCAGGGTACATaGGAATGCTCGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLVPQGT*ECSRCL
Trigger: CAGGCACCGCGAGCATTCCCATGTACCCTGGGGCAC...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGCCTCTGGACCCTGCCTaGGGGCTCAGCCGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWPLDPA*GLSRRG
Trigger: CCCACGCCGGCTGAGCCCTCAGGCAGGGTCCAGAGG...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCGCGGTCCCACAGGCTaGGCTGAGGTTCCAGTAATC +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMRGPTG*AEVPVI
Trigger: GATTACTGGAACCTCAGCTCAGCCTGTGGGACCGCG...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGACACACATTGGTGTGCTaGGAGCCTGACGACATCATG +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRHTLVC*EPDDIM
Trigger: CATGATGTCGTCAGGCTCTCAGCACACCAATGTGTG...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGCAGCCCCACTGCAAGTaGCTCAGTTTTCTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWQPHCK*LSFLVV
Trigger: CACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTG...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGCTGTTGGAACCGCCCTaGAGACCTGGGGCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALLLEPP*RPGARG
Trigger: TCCCCGGGCCCCAGGTCTGCAGGGCGGTTCCAACAG...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATCAGAGCTGCTGCGGGTaGTCTCTCCACCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHQSCCG*SLHRRA
Trigger: AGCCCTGCGGTGGAGAGAGCACCCGCAGCAGCTCTG...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTCAGAGCTGCTGCGGGTaGTCTCTCCACCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAQSCCG*SLHRRA
Trigger: AGCCCTGCGGTGGAGAGAGCACCCGCAGCAGCTCTG...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGCCTCCATCAGATTGTaGTCAAATTCCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRASIRL*SNSSRC
Trigger: GCAGCGGGAGGAATTTGAGCACAATCTGATGGAGGC...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCTCTGGCCAGCACCTaGCACGGGGCGTGTATCCGG +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHSLAST*HGACIR
Trigger: CCGGATACACGCCCCGTGGCAGGTGCTGGCCAGAGA...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCGTGCACAATGCGGCTaGGGGTGGCATTATCAAAGA +
Preference number: 4 (lower is better)
Translates to: APGYMGMLAVPETLGWRDRAQCG*GWHYQR
Trigger: TCTTTGATAATGCCACCCGCAGCCGCATTGTGCACG...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGCTGACGACATCATGCTaGCCAGCTGGCTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWLTTSC*PAGFGL
Trigger: CAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAG...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGAGCCTGACGACATCATaGTGCCCAGCTGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTSLTTS*CPAGFG
Trigger: GCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCT...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGTGCCGTGCCCTCCTCTaGTGCAGGCTGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMCRALL*CRLNCS
Trigger: TGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCA...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCGCATGTGCGTGTCTCTaGTGCCGTGCCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCACACL*CRALLC
Trigger: GCAGAGGAGGGCACGGCAGCAGAGACACGCACATGC...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGATGCTTACGTGCATGTaGGTGTCTCTGCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRMLTCM*VSLLPC
Trigger: GCACGGCAGCAGAGACACGCACATGCACGTAAGCAT...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGATCAAGCCAGGCCCCTaGAGACAGACAGCACGCCAT +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWIKPGP*RQTARH
Trigger: ATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGAT...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGTGGGAATGCTCGCGGTaGCTGAGACTCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMWECSR*LRLWGG
Trigger: TCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCA...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGCAGGGTACATGGGAATaGTCGCGGTGCCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTQGTWE*SRCLRL
Trigger: GAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTG...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGCAGGGTACATGGGAATaGTCGCGGTGCCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPEQGTWE*SRCLRL
Trigger: GAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTG...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTCTCCACCGCAGGGCTaGCCAGGATCTCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTSPPQG*PGSLLE
Trigger: TTCCAACAGAGATCCTGGCCAGCCCTGCGGTGGAGA...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTTGGCCAGGGAAGCCTTaGGCCAGGTGCACCCCGCGT +
Preference number: 4 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLWPGKP*ARCTPR
Trigger: ACGCGGGGTGCACCTGGCCCAAGGCTTCCCTGGCCA...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGCAGCTCAATGTCACCTaGGCCCCCAGCATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLQLNVT*APSMRL
Trigger: GAGCCTCATGCTGGGGGCCCAGGTGACATTGAGCTG...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGAGAATTCTGCCTCTCTaGCCAGCACCTGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMRILPL*PAPATG
Trigger: CCCCGTGGCAGGTGCTGGCCAGAGAGGCAGAATTCT...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGTCCCCTCCTTCAGCTaGCTGACGTTGAAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRVPSFS*LTLKKE
Trigger: CTCCTTTTTCAACGTCAGCCAGCTGAAGGAGGGGAC...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCGATCCCCACCTCCTaGGCTCCTCAGAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHSIPTS*APQSRL
Trigger: GAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGA...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGACAGGGGACACATGGTaGAGGCATTCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWTGDTW*RHSAGH
Trigger: GTGACCAGCAGAATGCCTTCACCATGTGTCCCCTGT...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGGAACCTCAATTTTGGTaGGCCACTTGGCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPEEPQFW*ATWPQR
Trigger: GCGCTGTGGCCAAGTGGCTCACCAAAATTGAGGTTC...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGTCCTCTGCTGCAGGCTaGACTGCTCACACATTGGTG +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPESSAAG*TAHTLV
Trigger: CACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGA...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGTCCTCTGCTGCAGGCTaGACTGCTCACACATTGGTG +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWSSAAG*TAHTLV
Trigger: CACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGA...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCCAGCCCCACTGCAAGTaGCTCAGTTTTCTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: PQGTWECSRCLRLWGGETQPHCK*LSFLVV
Trigger: CACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTG...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGATTAATTTGCATCTGCTaGGACTGTGGCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRLICIC*DCGSPT
Trigger: AGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAA...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACAACGTTTTTGTGACGTaGAGTGGAGACAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: APGYMGMLAVPETLGWRDNVFVT*SGDKPR
Trigger: CCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTT...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGCTGGGACTGAGCCCTTaGACCCTACATGTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPELGLSP*TLHVPR
Trigger: CCTAGGAACATGTAGGGTTCAAGGGCTCAGTCCCAG...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR GCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGGCCCCCTCTGGACCCTaGCTGAGGGCTCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKAPSGP*LRAQPA
Trigger: CGCCGGCTGAGCCCTCAGGCAGGGTCCAGAGGGGGC...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTCAGAGCTGCTGCGGGTaGTCTCTCCACCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLQSCCG*SLHRRA
Trigger: AGCCCTGCGGTGGAGAGAGCACCCGCAGCAGCTCTG...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGGGATCTCGTGCACAATaGGGCTGCGGGTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPEGSRAQ*GCGWHY
Trigger: ATAATGCCACCCGCAGCCGCATTGTGCACGAGATCC...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGGAGAGACAGAGCGGCTaGAGTTGTTATTCGATACAC +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWERQSG*SCYSIH
Trigger: GTGTATCGAATAACAACTGCAGCCGCTCTGTCTCTC...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTTGGCTGCCCGGCTCCTaGTTCGATCCCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLWLPGS*FDPHLL
Trigger: CAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCA...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGCTGACGACATCATGCTaGCCAGCTGGCTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLLTTSC*PAGFGL
Trigger: CAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAG...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGAGCCTGACGACATCATaGTGCCCAGCTGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLSLTTS*CPAGFG
Trigger: GCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCT...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGTGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QTDSTPCGCRNMLTCMCVCACLC*RALLCC
Trigger: GCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACA...CACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGCACLC*RALLCC
Trigger: GCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACA...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACAGGAACATGCTTACGTaGATGTGCGTGTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: APGYMGMLAVPETLGWRDRNMLT*MCVSLL
Trigger: CAGCAGAGACACGCACATGCACGTAAGCATGTTCCT...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGATCAAGCCAGGCCCCTaGAGACAGACAGCACGCCAT +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLIKPGP*RQTARH
Trigger: ATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGAT...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTCCATGTTTGGGGCCCTaGCCCCCTCTGGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCPCLGP*PPLDPA
Trigger: GGCAGGGTCCAGAGGGGGCCAGGGCCCCAAACATGG...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGTCTCCACCGCAGGGCTaGCCAGGATCTCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLSPPQG*PGSLLE
Trigger: TTCCAACAGAGATCCTGGCCAGCCCTGCGGTGGAGA...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTACGATAGCCAGCGAGTaGCCAGGGAAGCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAATIASE*PGKPWA
Trigger: GGCCCAAGGCTTCCCTGGCCACTCGCTGGCTATCGT...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATACGATAGCCAGCGAGTaGCCAGGGAAGCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHTIASE*PGKPWA
Trigger: GGCCCAAGGCTTCCCTGGCCACTCGCTGGCTATCGT...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGACAATGCGGCTGCGGGTaGCATTATCAAAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRQCGCG*HYQRRC
Trigger: ACACCTTCTTTGATAATGCCACCCGCAGCCGCATTG...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACGTGAAGGCATTCTGCTaGTCACACATCTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: APGYMGMLAVPETLGWRDVKAFC*SHISLL
Trigger: CAGCAGAGAGATGTGTGACCAGCAGAATGCCTTCAC...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATGGGTTGTCAAACAGGTaGCTGGCCTGCGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHGLSNR*LACAVP
Trigger: TGGGACCGCGCAGGCCAGCCACCTGTTTGACAACCC...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGGTCCCCTCCTTCAGCTaGCTGACGTTGAAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRVPSFS*LTLKKE
Trigger: CTCCTTTTTCAACGTCAGCCAGCTGAAGGAGGGGAC...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCAGGGTTCGGGGCCCATaGCGGCTCTCGGTAATCCTT +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCRVRGP*RLSVIL
Trigger: AAGGATTACCGAGAGCCGCCATGGGCCCCGAACCCT...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTCCGTGGGGATGTCTaGAATCATCCAGTCCACGAG +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWVRGDV*NHPVHE
Trigger: CTCGTGGACTGGATGATTCCAGACATCCCCACGGAC...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGATTCTCTTTCTTGATCTaGTCGCTGATGTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRFSFLI*SLMSVG
Trigger: CCCCACGGACATCAGCGACCAGATCAAGAAAGAGAA...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCCGGTGCCTGAGACTCTaGGGTGGAGAGACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGRCLRL*GGETPV
Trigger: CACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCG...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATGTGCCCCAGGGTACATaGGAATGCTCGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHVPQGT*ECSRCL
Trigger: CAGGCACCGCGAGCATTCCCATGTACCCTGGGGCAC...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCGTGCCCCAGGGTACATaGGAATGCTCGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGVPQGT*ECSRCL
Trigger: CAGGCACCGCGAGCATTCCCATGTACCCTGGGGCAC...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGTTCAGGGGAAGACACTaGGGACCAACTGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWFRGRH*GPTAAS
Trigger: GGAAGCAGCAGTTGGTCCCCAGTGTCTTCCCCTGAA...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR TCA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCACCCCAAAGACGATTaGGAATGTCAGGGCAATCAT +
Preference number: 4 (lower is better)
Translates to: APGYMGMLAVPETLGWRDHPKDD*ECQGNH
Trigger: ATGATTGCCCTGACATTCTCAATCGTCTTTGGGGTG...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGCACACATTGGTGTGCTaGGAGCCTGACGACATCATG +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTHTLVC*EPDDIM
Trigger: CATGATGTCGTCAGGCTCTCAGCACACCAATGTGTG...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGATGCTGCCTCCTGCTTTaGTCTCGTACATCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRCCLLL*SRTSLS
Trigger: AGAAAGAGATGTACGAGATCAAAGCAGGAGGCAGCA...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCGCCCGGGAGTCGCCATaGTGTGGACGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTARESP*CGRRPR
Trigger: GCGGGGTCTGCGTCCACATCATGGCGACTCCCGGGC...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546188.5
CDS-3UTR GCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACCTGTTGGAACCGCCCTaGAGACCTGGGGCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYLLEPP*RPGARG
Trigger: TCCCCGGGCCCCAGGTCTGCAGGGCGGTTCCAACAG...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCAGCATGAGGCTCCTTaGCTGTCTCCCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMQHEAP*LSPHWR
Trigger: TCTCCAATGGGGAGACAGGCAAGGAGCCTCATGCTG...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATACTCGGGGCTGCAGGTaGGAGCTCAGCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHTRGCR*ELSFCR
Trigger: TCTGCAGAAGCTGAGCTCGCACCTGCAGCCCCGAGT...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGCGTGCACAATGCGGCTaGGGGTGGCATTATCAAAGA +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTRAQCG*GWHYQR
Trigger: TCTTTGATAATGCCACCCGCAGCCGCATTGTGCACG...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATGAGGGCAAACACAGGTaGCAGGGGAAAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHEGKHR*QGKGGH
Trigger: GTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCCCTC...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCCTGACGACATCATGCTaGCCAGCTGGCTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCLTTSC*PAGFGL
Trigger: CAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAG...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGGGAATGCTCGCGGTaGCTGAGACTCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGWECSR*LRLWGG
Trigger: TCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCA...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGATCAGGTCCAGCGGCTaGACCATTCAGCCTTGTAAC +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWIRSSG*TIQPCN
Trigger: GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGAT...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTGGGGCCCGGGGACCTaGCATCTTGAGACACTGCTG +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALWGPGT*HLETLL
Trigger: CAGCAGTGTCTCAAGATGCCAGGTCCCCGGGCCCCA...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTGGCCAGGGAAGCCTTaGGCCAGGTGCACCCCGCGT +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYWPGKP*ARCTPR
Trigger: ACGCGGGGTGCACCTGGCCCAAGGCTTCCCTGGCCA...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGCAGCTCAATGTCACCTaGGCCCCCAGCATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QTDSTPCGCRNMLTCMCVQLNVT*APSMRL
Trigger: GAGCCTCATGCTGGGGGCCCAGGTGACATTGAGCTG...CACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGGTTGTTGCTGTGTTCTaGAACTCGGGGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLVVAVF*NSGLQV
Trigger: CACCTGCAGCCCCGAGTTCCAGAACACAGCAACAAC...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGCAATGCGGCTGCGGGTaGCATTATCAAAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRQCGCG*HYQRRC
Trigger: ACACCTTCTTTGATAATGCCACCCGCAGCCGCATTG...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCTTTCATACTCAGGCCTaGAATGTTCCTGGGCACGTT +
Preference number: 4 (lower is better)
Translates to: PQGTWECSRCLRLWGGETFHTQA*NVPGHV
Trigger: AACGTGCCCAGGAACATTCCAGGCCTGAGTATGAAA...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000650848.1
CDS-3UTR CCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGTCTGGATGTTTCGAATaGGCAGAGTCAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWSGCFE*AESVSP
Trigger: TGGAGAAACTGACTCTGCCCATTCGAAACATCCAGA...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGGTCCCCTCCTTCAGCTaGCTGACGTTGAAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTVPSFS*LTLKKE
Trigger: CTCCTTTTTCAACGTCAGCCAGCTGAAGGAGGGGAC...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATAGGGTTCGGGGCCCATaGCGGCTCTCGGTAATCCTT +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHRVRGP*RLSVIL
Trigger: AAGGATTACCGAGAGCCGCCATGGGCCCCGAACCCT...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGTTCTCTTTCTTGATCTaGTCGCTGATGTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRFSFLI*SLMSVG
Trigger: CCCCACGGACATCAGCGACCAGATCAAGAAAGAGAA...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGGTGCCCCAGGGTACATaGGAATGCTCGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALVPQGT*ECSRCL
Trigger: CAGGCACCGCGAGCATTCCCATGTACCCTGGGGCAC...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCTCTGCAGAGCCGCGCTaGACTTCTTTGCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCSAEPR*TSLQCC
Trigger: GCAGCATTGCAAAGAAGTTCAGCGCGGCTCTGCAGA...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGATGTCAGGGCAATCATaGATAAGATGGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWMSGQS*IRWRQS
Trigger: ACTTTGCCTCCATCTTATTCATGATTGCCCTGACAT...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCCCACAAACCTCCCTTTaGAAAAGGCCACATAGAAGA +
Preference number: 4 (lower is better)
Translates to: PQGTWECSRCLRLWGGETPQTSL*KRPHRR
Trigger: TCTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTGG...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTAATGCTCGCGGTGCCTaGGACTCTGGGGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLNARGA*DSGVER
Trigger: TCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATT...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGTTAATTTGCATCTGCTaGGACTGTGGCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWLICIC*DCGSPT
Trigger: AGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAA...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGTTAATTTGCATCTGCTaGGACTGTGGCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPELICIC*DCGSPT
Trigger: AGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAA...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCCTGTTGGAACCGCCCTaGAGACCTGGGGCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTLLEPP*RPGARG
Trigger: TCCCCGGGCCCCAGGTCTGCAGGGCGGTTCCAACAG...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGGCCTCCATCAGATTGTaGTCAAATTCCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLASIRL*SNSSRC
Trigger: GCAGCGGGAGGAATTTGAGCACAATCTGATGGAGGC...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGACTCGGGGCTGCAGGTaGGAGCTCAGCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALTRGCR*ELSFCR
Trigger: TCTGCAGAAGCTGAGCTCGCACCTGCAGCCCCGAGT...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGGGTCACACATCTCTCTaGTGGGAATATCTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWGHTSL*WEYLLQ
Trigger: TTGAAGAAGATATTCCCAGCAGAGAGATGTGTGACC...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAACAGGTGGCTGGCCTaGGCGGTCCCACAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCNRWLA*AVPQAE
Trigger: CTCAGCCTGTGGGACCGCGCAGGCCAGCCACCTGTT...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCGGACAGCAGACTGGTTaGTCTCCTTTAGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: PQGTWECSRCLRLWGGETGQQTG*SPLAFS
Trigger: AGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCC...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGAGGGCAAACACAGGTaGCAGGGGAAAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLEGKHR*QGKGGH
Trigger: GTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCCCTC...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATCTGACGACATCATGCTaGCCAGCTGGCTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHLTTSC*PAGFGL
Trigger: CAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAG...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCAGCCTGACGACATCATaGTGCCCAGCTGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGSLTTS*CPAGFG
Trigger: GCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCT...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGTGCTGCAGGCTGAACTaGTCACACATTGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLCCRLN*SHIGVL
Trigger: CAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCA...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTGCCGTGCCCTCCTCTaGTGCAGGCTGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALCRALL*CRLNCS
Trigger: TGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCA...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGAGGAACATGCTTACGTaGATGTGCGTGTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPERNMLT*MCVSLL
Trigger: CAGCAGAGACACGCACATGCACGTAAGCATGTTCCT...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCATCAAGCCAGGCCCCTaGAGACAGACAGCACGCCAT +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGIKPGP*RQTARH
Trigger: ATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGAT...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTGGGAATGCTCGCGGTaGCTGAGACTCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALWECSR*LRLWGG
Trigger: TCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCA...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAATAGTAAGTAGGGGATaGTGTGCTCCTGACTGCATT +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRIVSRG*CAPDCI
Trigger: AATGCAGTCAGGAGCACAGCATCCCCTACTTACTAT...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCCCATGTTTGGGGCCCTaGCCCCCTCTGGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTPCLGP*PPLDPA
Trigger: GGCAGGGTCCAGAGGGGGCCAGGGCCCCAAACATGG...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGCAATGCGGCTGCGGGTaGCATTATCAAAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWQCGCG*HYQRRC
Trigger: ACACCTTCTTTGATAATGCCACCCGCAGCCGCATTG...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTACCCATCGTGTTGTTaGCTCGGGAGCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGYPSCC*LGSRLC
Trigger: GCACAGCCTGCTCCCGAGCCAACAACACGATGGGTA...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGATTCATATCGTCCTCTaGACTATCGTATTCACCGTC +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWIHIVL*TIVFTV
Trigger: GACGGTGAATACGATAGTCCAGAGGACGATATGAAT...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTGGGTTGTCAAACAGGTaGCTGGCCTGCGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCGLSNR*LACAVP
Trigger: TGGGACCGCGCAGGCCAGCCACCTGTTTGACAACCC...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGATTCTGGACAGCAGACTaGTTGCTCTCCTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRFWTAD*LLSFSI
Trigger: AATGCTAAAGGAGAGCAACCAGTCTGCTGTCCAGAA...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTCATGAGACAGCCCCCTaGAGCACACTCTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAHETAP*STLFHA
Trigger: CGCATGGAAGAGTGTGCTCCAGGGGGCTGTCTCATG...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCTGCAGAGCCGCGCTaGACTTCTTTGCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHSAEPR*TSLQCC
Trigger: GCAGCATTGCAAAGAAGTTCAGCGCGGCTCTGCAGA...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAATGTCAGGGCAATCATaGATAAGATGGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRMSGQS*IRWRQS
Trigger: ACTTTGCCTCCATCTTATTCATGATTGCCCTGACAT...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGGAACCTCAATTTTGGTaGGCCACTTGGCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: QTDSTPCGCRNMLTCMCVEPQFW*ATWPQR
Trigger: GCGCTGTGGCCAAGTGGCTCACCAAAATTGAGGTTC...CACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATGAACCTCAATTTTGGTaGGCCACTTGGCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHEPQFW*ATWPQR
Trigger: GCGCTGTGGCCAAGTGGCTCACCAAAATTGAGGTTC...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCCACACATTGGTGTGCTaGGAGCCTGACGACATCATG +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCHTLVC*EPDDIM
Trigger: CATGATGTCGTCAGGCTCTCAGCACACCAATGTGTG...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCGGGATGCTGTGCTCCTaGCTGCATTTCTCTTACAGC +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCGMLCS*LHFSYS
Trigger: GCTGTAAGAGAAATGCAGTCAGGAGCACAGCATCCC...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGAACGTTTTTGTGACGTaGAGTGGAGACAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMNVFVT*SGDKPR
Trigger: CCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTT...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGCTCCAAACGTTTTTGTaGCGTGAAGTGGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTLQTFL*REVETS
Trigger: GCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAG...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCTGCCTCCTGCTTTaGTCTCGTACATCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTCCLLL*SRTSLS
Trigger: AGAAAGAGATGTACGAGATCAAAGCAGGAGGCAGCA...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGTGCTGCCTCCTGCTTTaGTCTCGTACATCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWCCLLL*SRTSLS
Trigger: AGAAAGAGATGTACGAGATCAAAGCAGGAGGCAGCA...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGTCTCTGGCCAGCACCTaGCACGGGGCGTGTATCCGG +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKSLAST*HGACIR
Trigger: CCGGATACACGCCCCGTGGCAGGTGCTGGCCAGAGA...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTGCGAGCTCAGCTTCTaGAGAGCCGCGCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNCELSF*RAALNF
Trigger: GAAGTTCAGCGCGGCTCTGCAGAAGCTGAGCTCGCA...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCCGTGCACAATGCGGCTaGGGGTGGCATTATCAAAGA +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCRAQCG*GWHYQR
Trigger: TCTTTGATAATGCCACCCGCAGCCGCATTGTGCACG...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCGGATCTCGTGCACAATaGGGCTGCGGGTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGGSRAQ*GCGWHY
Trigger: ATAATGCCACCCGCAGCCGCATTGTGCACGAGATCC...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGGATCTCGTGCACAATaGGGCTGCGGGTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAGSRAQ*GCGWHY
Trigger: ATAATGCCACCCGCAGCCGCATTGTGCACGAGATCC...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGTGAGTTTTCTGGCTaGGTCCCCTCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGCEFSG*VPSFSW
Trigger: CCAGCTGAAGGAGGGGACGCAGCCAGAAAACTCACA...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGTGGCTGCCCGGCTCCTaGTTCGATCCCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKWLPGS*FDPHLL
Trigger: CAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCA...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGCATGTGCGTGTCTCTaGTGCCGTGCCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWACACL*CRALLC
Trigger: GCAGAGGAGGGCACGGCAGCAGAGACACGCACATGC...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACCAGGGTACATGGGAATaGTCGCGGTGCCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNQGTWE*SRCLRL
Trigger: GAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTG...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGCCAGGTTTGGACCTTTaGACCTTACTATCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWPGLDL*TLLSGP
Trigger: TGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGG...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCAATGCTGCCTCCTaGTTTGATCTCGTACATCTC +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTCNAAS*FDLVHL
Trigger: GAGATGTACGAGATCAAAGCAGGAGGCAGCATTGCA...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGACTGCTGTCCATGTTTaGGGCCCTGGCCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGTAVHV*GPGPLW
Trigger: CCAGAGGGGGCCAGGGCCCCAAACATGGACAGCAGT...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTTGGGGCCCGGGGACCTaGCATCTTGAGACACTGCTG +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCWGPGT*HLETLL
Trigger: CAGCAGTGTCTCAAGATGCCAGGTCCCCGGGCCCCA...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGTGGGGCCCGGGGACCTaGCATCTTGAGACACTGCTG +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWWGPGT*HLETLL
Trigger: CAGCAGTGTCTCAAGATGCCAGGTCCCCGGGCCCCA...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTGGCCAGGATCTCTGTTaGAACCGCCCTGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCGQDLC*NRPADL
Trigger: CAGGTCTGCAGGGCGGTTCCAACAGAGATCCTGGCC...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCTGGCCAGGGAAGCCTTaGGCCAGGTGCACCCCGCGT +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIWPGKP*ARCTPR
Trigger: ACGCGGGGTGCACCTGGCCCAAGGCTTCCCTGGCCA...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACACGATAGCCAGCGAGTaGCCAGGGAAGCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYTIASE*PGKPWA
Trigger: GGCCCAAGGCTTCCCTGGCCACTCGCTGGCTATCGT...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAACAAAGATGGATCCCTaGCTTTTATTCTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRTKMDP*LLFSKS
Trigger: GGACTTGGAGAATAAAAGCCAGGGATCCATCTTTGT...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAGAATTCTGCCTCTCTaGCCAGCACCTGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCRILPL*PAPATG
Trigger: CCCCGTGGCAGGTGCTGGCCAGAGAGGCAGAATTCT...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGTTGTTGCTGTGTTCTaGAACTCGGGGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAVVAVF*NSGLQV
Trigger: CACCTGCAGCCCCGAGTTCCAGAACACAGCAACAAC...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGGGTACATCTTCTCCCTaGAGAATGGGTAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMGTSSP*RMGRRG
Trigger: ACCTCTCCTACCCATTCTCCAGGGAGAAGATGTACC...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGGTGAAGGCATTCTGCTaGTCACACATCTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLVKAFC*SHISLL
Trigger: CAGCAGAGAGATGTGTGACCAGCAGAATGCCTTCAC...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTTGTCAAACAGGTGGCTaGCCTGCGCGGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCCQTGG*PARSHR
Trigger: CCTGTGGGACCGCGCAGGCCAGCCACCTGTTTGACA...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTTTCATACTCAGGCCTaGAATGTTCCTGGGCACGTT +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTFHTQA*NVPGHV
Trigger: AACGTGCCCAGGAACATTCCAGGCCTGAGTATGAAA...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000650848.1
CDS-3UTR CCA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACTTTTCTCTCGAACTTTaGTTTCATACTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: APGYMGMLAVPETLGWRDFSLEL*FHTQAW
Trigger: CCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAA...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACTTTGTTTCCAATTTCTaGACAGCAGACTGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: APGYMGMLAVPETLGWRDFVSNF*TADWLL
Trigger: GAGCAACCAGTCTGCTGTCCAGAAATTGGAAACAAA...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCTTTGTTTCCAATTTCTaGACAGCAGACTGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PQGTWECSRCLRLWGGETFVSNF*TADWLL
Trigger: GAGCAACCAGTCTGCTGTCCAGAAATTGGAAACAAA...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGTCCGTGGGGATGTCTaGAATCATCCAGTCCACGAG +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAVRGDV*NHPVHE
Trigger: CTCGTGGACTGGATGATTCCAGACATCCCCACGGAC...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGTCGATCCCCACCTCCTaGGCTCCTCAGAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKSIPTS*APQSRL
Trigger: GAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGA...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCATCATGCTGCCCAGCTaGCTTTGGCCTGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGIMLPS*LWPEGA
Trigger: AGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGAT...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGCACCCCAAAGACGATTaGGAATGTCAGGGCAATCAT +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLHPKDD*ECQGNH
Trigger: ATGATTGCCCTGACATTCTCAATCGTCTTTGGGGTG...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTTAAACCTGCAGAACTaGACCTCCTGGTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTLNLQN*TSWSNC
Trigger: ACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAA...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCTTAATTTGCATCTGCTaGGACTGTGGCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCLICIC*DCGSPT
Trigger: AGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAA...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTCAGCATGAGGCTCCTTaGCTGTCTCCCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLQHEAP*LSPHWR
Trigger: TCTCCAATGGGGAGACAGGCAAGGAGCCTCATGCTG...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTCTGGAACTCGGGGCTaGAGGTGCGAGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYSGTRG*RCELSF
Trigger: GAAGCTGAGCTCGCACCTGCAGCCCCGAGTTCCAGA...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGCTCGGGAGCAGGCTGTaGGCTTCAGGATCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGLGSRL*ASGSRA
Trigger: TGCACGAGATCCTGAAGCGCACAGCCTGCTCCCGAG...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGGGTCACACATCTCTCTaGTGGGAATATCTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRGHTSL*WEYLLQ
Trigger: TTGAAGAAGATATTCCCAGCAGAGAGATGTGTGACC...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCAACAGGTGGCTGGCCTaGGCGGTCCCACAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICINRWLA*AVPQAE
Trigger: CTCAGCCTGTGGGACCGCGCAGGCCAGCCACCTGTT...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGGAGAGACAGAGCGGCTaGAGTTGTTATTCGATACAC +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMERQSG*SCYSIH
Trigger: GTGTATCGAATAACAACTGCAGCCGCTCTGTCTCTC...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGGAGCACACTCTTCCATaGGGTAACCATCGAATACAT +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPEEHTLP*GNHRIH
Trigger: ATGTATTCGATGGTTACCGCATGGAAGAGTGTGCTC...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGAGCACACTCTTCCATaGGGTAACCATCGAATACAT +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWEHTLP*GNHRIH
Trigger: ATGTATTCGATGGTTACCGCATGGAAGAGTGTGCTC...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTGTGAGTTTTCTGGCTaGGTCCCCTCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNCEFSG*VPSFSW
Trigger: CCAGCTGAAGGAGGGGACGCAGCCAGAAAACTCACA...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTCTGACGACATCATGCTaGCCAGCTGGCTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCLTTSC*PAGFGL
Trigger: CAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAG...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAGCCTGACGACATCATaGTGCCCAGCTGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCSLTTS*CPAGFG
Trigger: GCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCT...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGTGCCGTGCCCTCCTCTaGTGCAGGCTGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWCRALL*CRLNCS
Trigger: TGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCA...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTTGCCGTGCCCTCCTCTaGTGCAGGCTGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCCRALL*CRLNCS
Trigger: TGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCA...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCGCATGTGCGTGTCTCTaGTGCCGTGCCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTACACL*CRALLC
Trigger: GCAGAGGAGGGCACGGCAGCAGAGACACGCACATGC...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGATGCTTACGTGCATGTaGGTGTCTCTGCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALMLTCM*VSLLPC
Trigger: GCACGGCAGCAGAGACACGCACATGCACGTAAGCAT...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGTGCAATGCTGCCTCCTaGTTTGATCTCGTACATCTC +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLCNAAS*FDLVHL
Trigger: GAGATGTACGAGATCAAAGCAGGAGGCAGCATTGCA...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCCTGGGGACCAACTGCTaGTTCCAGAGGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTLGTNC*FQRLLG
Trigger: GCCCAGGAGCCTCTGGAAGCAGCAGTTGGTCCCCAG...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR CCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGGGCCAGGATCTCTGTTaGAACCGCCCTGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGGQDLC*NRPADL
Trigger: CAGGTCTGCAGGGCGGTTCCAACAGAGATCCTGGCC...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGCAGCTCAATGTCACCTaGGCCCCCAGCATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWQLNVT*APSMRL
Trigger: GAGCCTCATGCTGGGGGCCCAGGTGACATTGAGCTG...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGGTATCCGGACAAAGATaGATCCCTGGCTTTTATTCT +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRVSGQR*IPGFYS
Trigger: AGAATAAAAGCCAGGGATCCATCTTTGTCCGGATAC...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGAGAATTCTGCCTCTCTaGCCAGCACCTGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWRILPL*PAPATG
Trigger: CCCCGTGGCAGGTGCTGGCCAGAGAGGCAGAATTCT...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGAGAATTCTGCCTCTCTaGCCAGCACCTGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGRILPL*PAPATG
Trigger: CCCCGTGGCAGGTGCTGGCCAGAGAGGCAGAATTCT...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGCTTCTCCCTGGAGAATaGGTAGGAGAGGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWLLPGE*VGEVFH
Trigger: ATGAAAAACCTCTCCTACCCATTCTCCAGGGAGAAG...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTTACCCATCGTGTTGTTaGCTCGGGAGCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCYPSCC*LGSRLC
Trigger: GCACAGCCTGCTCCCGAGCCAACAACACGATGGGTA...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGATTCATATCGTCCTCTaGACTATCGTATTCACCGTC +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRIHIVL*TIVFTV
Trigger: GACGGTGAATACGATAGTCCAGAGGACGATATGAAT...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCGTGAAGGCATTCTGCTaGTCACACATCTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCVKAFC*SHISLL
Trigger: CAGCAGAGAGATGTGTGACCAGCAGAATGCCTTCAC...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGAGGGTTCGGGGCCCATaGCGGCTCTCGGTAATCCTT +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWRVRGP*RLSVIL
Trigger: AAGGATTACCGAGAGCCGCCATGGGCCCCGAACCCT...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGGTCCGTGGGGATGTCTaGAATCATCCAGTCCACGAG +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALVRGDV*NHPVHE
Trigger: CTCGTGGACTGGATGATTCCAGACATCCCCACGGAC...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGCTGCCCAGCTGGCTTTaGCCTGAAGGTGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWLPSWL*PEGAEL
Trigger: CAGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAG...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCCGGTGCCTGAGACTCTaGGGTGGAGAGACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTRCLRL*GGETPV
Trigger: CACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCG...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCCACAAACCTCCCTTTaGAAAAGGCCACATAGAAGA +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMPQTSL*KRPHRR
Trigger: TCTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTGG...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGCAAAACCAAACTGGATaGTCATTTCCATGTACTCCG +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPEQNQTG*SFPCTP
Trigger: CGGAGTACATGGAAATGATCATCCAGTTTGGTTTTG...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGTTAAACCTGCAGAACTaGACCTCCTGGTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMLNLQN*TSWSNC
Trigger: ACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAA...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGAATGCTCGCGGTGCCTaGGACTCTGGGGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKNARGA*DSGVER
Trigger: TCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATT...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGGGGATGCTGTGCTCCTaGCTGCATTTCTCTTACAGC +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALGMLCS*LHFSYS
Trigger: GCTGTAAGAGAAATGCAGTCAGGAGCACAGCATCCC...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTCAGCCCCACTGCAAGTaGCTCAGTTTTCTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAQPHCK*LSFLVV
Trigger: CACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTG...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCCTCCAAACGTTTTTGTaGCGTGAAGTGGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCLQTFL*REVETS
Trigger: GCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAG...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCGGCCTGGAATGTTCCTaGGAACTCACTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGGLECS*ELTSSS
Trigger: AGAGGAAGAAGTGAGTTCTCAGGAACATTCCAGGCC...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546188.5
CDS-3UTR GCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTGCGAGCTCAGCTTCTaGAGAGCCGCGCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYCELSF*RAALNF
Trigger: GAAGTTCAGCGCGGCTCTGCAGAAGCTGAGCTCGCA...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTTGCGAGCTCAGCTTCTaGAGAGCCGCGCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCCELSF*RAALNF
Trigger: GAAGTTCAGCGCGGCTCTGCAGAAGCTGAGCTCGCA...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTTTTCATCTTGTTGTTaGTGTGTTCTGGAACTCGGG +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTFSSCC*CVLELG
Trigger: CCCGAGTTCCAGAACACAGCAACAACAAGATGAAAA...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGTTTTCATCTTGTTGTTaGTGTGTTCTGGAACTCGGG +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWFSSCC*CVLELG
Trigger: CCCGAGTTCCAGAACACAGCAACAACAAGATGAAAA...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGCTCGGGAGCAGGCTGTaGGCTTCAGGATCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKLGSRL*ASGSRA
Trigger: TGCACGAGATCCTGAAGCGCACAGCCTGCTCCCGAG...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGCTCATAGATATTGTTTaGGATCAGAGAGTTAATACC +
Preference number: 4 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWLIDIV*DQRVNT
Trigger: GGTATTAACTCTCTGATCGCAAACAATATCTATGAG...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCGAGGGCAAACACAGGTaGCAGGGGAAAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTEGKHR*QGKGGH
Trigger: GTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCCCTC...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACAGCCTGACGACATCATaGTGCCCAGCTGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYSLTTS*CPAGFG
Trigger: GCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCT...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTGCTGCAGGCTGAACTaGTCACACATTGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNCCRLN*SHIGVL
Trigger: CAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCA...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGTGCCGTGCCCTCCTCTaGTGCAGGCTGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKCRALL*CRLNCS
Trigger: TGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCA...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCAGGAACATGCTTACGTaGATGTGCGTGTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGRNMLT*MCVSLL
Trigger: CAGCAGAGACACGCACATGCACGTAAGCATGTTCCT...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACCAGGGTACATGGGAATaGTCGCGGTGCCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYQGTWE*SRCLRL
Trigger: GAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTG...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGATAGTAAGTAGGGGATaGTGTGCTCCTGACTGCATT +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMIVSRG*CAPDCI
Trigger: AATGCAGTCAGGAGCACAGCATCCCCTACTTACTAT...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTATCAGGTCCAGCGGCTaGACCATTCAGCCTTGTAAC +
Preference number: 4 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLIRSSG*TIQPCN
Trigger: GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGAT...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACCCTGGGCATCTTGGGTaGTTGGGAGCTGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYPGHLG*LGAASP
Trigger: TGGTGAAGCAGCTCCCAAGCACCCAAGATGCCCAGG...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR CCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTTCTCCACCGCAGGGCTaGCCAGGATCTCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCSPPQG*PGSLLE
Trigger: TTCCAACAGAGATCCTGGCCAGCCCTGCGGTGGAGA...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCACGATAGCCAGCGAGTaGCCAGGGAAGCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICITIASE*PGKPWA
Trigger: GGCCCAAGGCTTCCCTGGCCACTCGCTGGCTATCGT...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGACAAAGATGGATCCCTaGCTTTTATTCTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTTKMDP*LLFSKS
Trigger: GGACTTGGAGAATAAAAGCCAGGGATCCATCTTTGT...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGGTATCCGGACAAAGATaGATCCCTGGCTTTTATTCT +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTVSGQR*IPGFYS
Trigger: AGAATAAAAGCCAGGGATCCATCTTTGTCCGGATAC...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTCAATGCGGCTGCGGGTaGCATTATCAAAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAQCGCG*HYQRRC
Trigger: ACACCTTCTTTGATAATGCCACCCGCAGCCGCATTG...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTACCCATCGTGTTGTTaGCTCGGGAGCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYYPSCC*LGSRLC
Trigger: GCACAGCCTGCTCCCGAGCCAACAACACGATGGGTA...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGTGAAGGCATTCTGCTaGTCACACATCTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAVKAFC*SHISLL
Trigger: CAGCAGAGAGATGTGTGACCAGCAGAATGCCTTCAC...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGTTTTCTCTCGAACTTTaGTTTCATACTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPEFSLEL*FHTQAW
Trigger: CCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAA...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTTTGTTTCCAATTTCTaGACAGCAGACTGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTFVSNF*TADWLL
Trigger: GAGCAACCAGTCTGCTGTCCAGAAATTGGAAACAAA...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTCAAAGATGTTGTTCTaGATCAACTGCTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTSKMLF*INCFPN
Trigger: GTTGGGGAAGCAGTTGATCCAGAACAACATCTTTGA...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGTCAAAGATGTTGTTCTaGATCAACTGCTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWSKMLF*INCFPN
Trigger: GTTGGGGAAGCAGTTGATCCAGAACAACATCTTTGA...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTGTCCGTGGGGATGTCTaGAATCATCCAGTCCACGAG +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCVRGDV*NHPVHE
Trigger: CTCGTGGACTGGATGATTCCAGACATCCCCACGGAC...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTTCTCTTTCTTGATCTaGTCGCTGATGTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHFSFLI*SLMSVG
Trigger: CCCCACGGACATCAGCGACCAGATCAAGAAAGAGAA...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCCTGCCCAGCTGGCTTTaGCCTGAAGGTGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTLPSWL*PEGAEL
Trigger: CAGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAG...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCGCTTCCAGAGGCTCCTaGGCATCTTGGGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTASRGS*ASWVLG
Trigger: CCCAAGCACCCAAGATGCCCAGGAGCCTCTGGAAGC...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR TCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTGGGGACCTGGCATCTTaGGACACTGCTGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCGDLAS*DTAVHV
Trigger: AACATGGACAGCAGTGTCTCAAGATGCCAGGTCCCC...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTCTGCAGAGCCGCGCTaGACTTCTTTGCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYSAEPR*TSLQCC
Trigger: GCAGCATTGCAAAGAAGTTCAGCGCGGCTCTGCAGA...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGATGTCAGGGCAATCATaGATAAGATGGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMMSGQS*IRWRQS
Trigger: ACTTTGCCTCCATCTTATTCATGATTGCCCTGACAT...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTCCTCTGCTGCAGGCTaGACTGCTCACACATTGGTG +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYSSAAG*TAHTLV
Trigger: CACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGA...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCAATGCTCGCGGTGCCTaGGACTCTGGGGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICINARGA*DSGVER
Trigger: TCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATT...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTGGCATCTTGAGACACTaGTGTCCATGTTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCGILRH*CPCLGP
Trigger: GGGCCCCAAACATGGACAGCAGTGTCTCAAGATGCC...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTGCGAGCTCAGCTTCTaGAGAGCCGCGCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTCELSF*RAALNF
Trigger: GAAGTTCAGCGCGGCTCTGCAGAAGCTGAGCTCGCA...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCTCTGGAACTCGGGGCTaGAGGTGCGAGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICISGTRG*RCELSF
Trigger: GAAGCTGAGCTCGCACCTGCAGCCCCGAGTTCCAGA...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGTTTTCATCTTGTTGTTaGTGTGTTCTGGAACTCGGG +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMFSSCC*CVLELG
Trigger: CCCGAGTTCCAGAACACAGCAACAACAAGATGAAAA...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGGGATCTCGTGCACAATaGGGCTGCGGGTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGGSRAQ*GCGWHY
Trigger: ATAATGCCACCCGCAGCCGCATTGTGCACGAGATCC...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGGAGAGACAGAGCGGCTaGAGTTGTTATTCGATACAC +
Preference number: 4 (lower is better)
Translates to: QTDSTPCGCRNMLTCMCVERQSG*SCYSIH
Trigger: GTGTATCGAATAACAACTGCAGCCGCTCTGTCTCTC...CACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGTGTAACAAACTTCTTTaGATCGAGCCGCACTTCAAT +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWCNKLL*IEPHFN
Trigger: ATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACA...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTTGTGAGTTTTCTGGCTaGGTCCCCTCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCCEFSG*VPSFSW
Trigger: CCAGCTGAAGGAGGGGACGCAGCCAGAAAACTCACA...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCCGTGCCCTCCTCTGCTaGAGGCTGAACTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIRALLC*RLNCSH
Trigger: GTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACG...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGATGCTTACGTGCATGTaGGTGTCTCTGCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGMLTCM*VSLLPC
Trigger: GCACGGCAGCAGAGACACGCACATGCACGTAAGCAT...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCACACTGGGGACCAACTaGTGCTTCCAGAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTTLGTN*CFQRLL
Trigger: CAGGAGCCTCTGGAAGCAGCAGTTGGTCCCCAGTGT...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR CCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCGGCCAGGATCTCTGTTaGAACCGCCCTGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIGQDLC*NRPADL
Trigger: CAGGTCTGCAGGGCGGTTCCAACAGAGATCCTGGCC...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTGTTGTTGCTGTGTTCTaGAACTCGGGGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCVVAVF*NSGLQV
Trigger: CACCTGCAGCCCCGAGTTCCAGAACACAGCAACAAC...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCCTTCTCCCTGGAGAATaGGTAGGAGAGGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCLLPGE*VGEVFH
Trigger: ATGAAAAACCTCTCCTACCCATTCTCCAGGGAGAAG...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGATTCATATCGTCCTCTaGACTATCGTATTCACCGTC +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLIHIVL*TIVFTV
Trigger: GACGGTGAATACGATAGTCCAGAGGACGATATGAAT...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCTTCTGGACAGCAGACTaGTTGCTCTCCTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCFWTAD*LLSFSI
Trigger: AATGCTAAAGGAGAGCAACCAGTCTGCTGTCCAGAA...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGTTCATCAGGTAACCTaGGAAACGATCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAVHQVT*ETILPG
Trigger: ACCTGGAAGGATCGTTTCCCAGGTTACCTGATGAAC...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGCATGAGACAGCCCCCTaGAGCACACTCTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKHETAP*STLFHA
Trigger: CGCATGGAAGAGTGTGCTCCAGGGGGCTGTCTCATG...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGTCAAAGATGTTGTTCTaGATCAACTGCTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLSKMLF*INCFPN
Trigger: GTTGGGGAAGCAGTTGATCCAGAACAACATCTTTGA...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGGTGACAAAACCAAACTaGATGATCATTTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRVTKPN*MIISMY
Trigger: GTACATGGAAATGATCATCCAGTTTGGTTTTGTCAC...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGAACATCACGAGGTTCTaGAAGATTATGACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWNITRF*KIMTKA
Trigger: GGCTTTTGTCATAATCTTCCAGAACCTCGTGATGTT...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGTCCGTGGGGATGTCTaGAATCATCCAGTCCACGAG +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWVRGDV*NHPVHE
Trigger: CTCGTGGACTGGATGATTCCAGACATCCCCACGGAC...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTTCTCTTTCTTGATCTaGTCGCTGATGTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALFSFLI*SLMSVG
Trigger: CCCCACGGACATCAGCGACCAGATCAAGAAAGAGAA...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTTTCTCTTTCTTGATCTaGTCGCTGATGTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLFSFLI*SLMSVG
Trigger: CCCCACGGACATCAGCGACCAGATCAAGAAAGAGAA...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGATCATGCTGCCCAGCTaGCTTTGGCCTGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWIMLPS*LWPEGA
Trigger: AGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGAT...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCGGCTCCTGGGCATCTTaGGTGCTTGGGAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIGSWAS*VLGSCF
Trigger: GAAGCAGCTCCCAAGCACCCAAGATGCCCAGGAGCC...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR TCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCACAGGGGACACATGGTaGAGGCATTCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTTGDTW*RHSAGH
Trigger: GTGACCAGCAGAATGCCTTCACCATGTGTCCCCTGT...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGACAGGGGACACATGGTaGAGGCATTCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKTGDTW*RHSAGH
Trigger: GTGACCAGCAGAATGCCTTCACCATGTGTCCCCTGT...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCCAAAACCAAACTGGATaGTCATTTCCATGTACTCCG +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCQNQTG*SFPCTP
Trigger: CGGAGTACATGGAAATGATCATCCAGTTTGGTTTTG...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGTTAAACCTGCAGAACTaGACCTCCTGGTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: QTDSTPCGCRNMLTCMCVLNLQN*TSWSNC
Trigger: ACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAA...CACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGCACACATTGGTGTGCTaGGAGCCTGACGACATCATG +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGHTLVC*EPDDIM
Trigger: CATGATGTCGTCAGGCTCTCAGCACACCAATGTGTG...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGTCCTCTGCTGCAGGCTaGACTGCTCACACATTGGTG +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKSSAAG*TAHTLV
Trigger: CACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGA...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGGGGATGCTGTGCTCCTaGCTGCATTTCTCTTACAGC +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGGMLCS*LHFSYS
Trigger: GCTGTAAGAGAAATGCAGTCAGGAGCACAGCATCCC...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTGGGATGCTGTGCTCCTaGCTGCATTTCTCTTACAGC +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCGMLCS*LHFSYS
Trigger: GCTGTAAGAGAAATGCAGTCAGGAGCACAGCATCCC...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACGGGATGCTGTGCTCCTaGCTGCATTTCTCTTACAGC +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYGMLCS*LHFSYS
Trigger: GCTGTAAGAGAAATGCAGTCAGGAGCACAGCATCCC...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACGTTTTTGTGACGTaGAGTGGAGACAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCNVFVT*SGDKPR
Trigger: CCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTT...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGCTCCAAACGTTTTTGTaGCGTGAAGTGGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALLQTFL*REVETS
Trigger: GCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAG...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGGCCTCCATCAGATTGTaGTCAAATTCCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGASIRL*SNSSRC
Trigger: GCAGCGGGAGGAATTTGAGCACAATCTGATGGAGGC...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCTTTTCATCTTGTTGTTaGTGTGTTCTGGAACTCGGG +
Preference number: 4 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCFSSCC*CVLELG
Trigger: CCCGAGTTCCAGAACACAGCAACAACAAGATGAAAA...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGCGTGCACAATGCGGCTaGGGGTGGCATTATCAAAGA +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWRAQCG*GWHYQR
Trigger: TCTTTGATAATGCCACCCGCAGCCGCATTGTGCACG...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGCTCATAGATATTGTTTaGGATCAGAGAGTTAATACC +
Preference number: 4 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRLIDIV*DQRVNT
Trigger: GGTATTAACTCTCTGATCGCAAACAATATCTATGAG...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGGACAGCAGACTGGTTaGTCTCCTTTAGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAGQQTG*SPLAFS
Trigger: AGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCC...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGGGACAGCAGACTGGTTaGTCTCCTTTAGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: QTDSTPCGCRNMLTCMCVGQQTG*SPLAFS
Trigger: AGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCC...CACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGGAGCACACTCTTCCATaGGGTAACCATCGAATACAT +
Preference number: 4 (lower is better)
Translates to: QTDSTPCGCRNMLTCMCVEHTLP*GNHRIH
Trigger: ATGTATTCGATGGTTACCGCATGGAAGAGTGTGCTC...CACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGTGTAACAAACTTCTTTaGATCGAGCCGCACTTCAAT +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMCNKLL*IEPHFN
Trigger: ATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACA...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGTGCTGCAGGCTGAACTaGTCACACATTGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWCCRLN*SHIGVL
Trigger: CAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCA...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGATCAGGTCCAGCGGCTaGACCATTCAGCCTTGTAAC +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGIRSSG*TIQPCN
Trigger: GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGAT...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGCCAGGTTTGGACCTTTaGACCTTACTATCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALPGLDL*TLLSGP
Trigger: TGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGG...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGTGGGTGCTTGGGAGCTaGTTCACCAAGTCACACACT +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWWVLGS*FTKSHT
Trigger: AGTGTGTGACTTGGTGAAGCAGCTCCCAAGCACCCA...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR CCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCTCTCCACCGCAGGGCTaGCCAGGATCTCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICISPPQG*PGSLLE
Trigger: TTCCAACAGAGATCCTGGCCAGCCCTGCGGTGGAGA...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCTACCCATCGTGTTGTTaGCTCGGGAGCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIYPSCC*LGSRLC
Trigger: GCACAGCCTGCTCCCGAGCCAACAACACGATGGGTA...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCACACATCTCTCTGCTaGGAATATCTTCTTCAATTG +
Preference number: 4 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMHTSLC*EYLLQL
Trigger: CAATTGAAGAAGATATTCCCAGCAGAGAGATGTGTG...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTTCTGGACAGCAGACTaGTTGCTCTCCTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGFWTAD*LLSFSI
Trigger: AATGCTAAAGGAGAGCAACCAGTCTGCTGTCCAGAA...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTTCATCAGGTAACCTaGGAAACGATCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLVHQVT*ETILPG
Trigger: ACCTGGAAGGATCGTTTCCCAGGTTACCTGATGAAC...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACGTTCATCAGGTAACCTaGGAAACGATCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNVHQVT*ETILPG
Trigger: ACCTGGAAGGATCGTTTCCCAGGTTACCTGATGAAC...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTCTGGATGTTTCGAATaGGCAGAGTCAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGSGCFE*AESVSP
Trigger: TGGAGAAACTGACTCTGCCCATTCGAAACATCCAGA...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTAGATTCCGATATCTTTaGTTCTTACAGCATCCGGCC +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAARFRYL*FLQHPA
Trigger: GGCCGGATGCTGTAAGAACCAAAGATATCGGAATCT...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGATCATGCTGCCCAGCTaGCTTTGGCCTGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKIMLPS*LWPEGA
Trigger: AGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGAT...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCATCATGCTGCCCAGCTaGCTTTGGCCTGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTIMLPS*LWPEGA
Trigger: AGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGAT...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACAACATCACGAGGTTCTaGCTGCCAGTTGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYNITRF*LPVARS
Trigger: TGAGCGTGCAACTGGCAGCCAGAACCTCGTGATGTT...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR TCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCACAGGGGACACATGGTaGAGGCATTCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICITGDTW*RHSAGH
Trigger: GTGACCAGCAGAATGCCTTCACCATGTGTCCCCTGT...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGCACACATTGGTGTGCTaGGAGCCTGACGACATCATG +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKHTLVC*EPDDIM
Trigger: CATGATGTCGTCAGGCTCTCAGCACACCAATGTGTG...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTCAGCCCCACTGCAAGTaGCTCAGTTTTCTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCQPHCK*LSFLVV
Trigger: CACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTG...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCCAGCATGAGGCTCCTTaGCTGTCTCCCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIQHEAP*LSPHWR
Trigger: TCTCCAATGGGGAGACAGGCAAGGAGCCTCATGCTG...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGGCCTCCATCAGATTGTaGTCAAATTCCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKASIRL*SNSSRC
Trigger: GCAGCGGGAGGAATTTGAGCACAATCTGATGGAGGC...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGGTCACACATCTCTCTaGTGGGAATATCTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAGHTSL*WEYLLQ
Trigger: TTGAAGAAGATATTCCCAGCAGAGAGATGTGTGACC...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGGACAGCAGACTGGTTaGTCTCCTTTAGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLGQQTG*SPLAFS
Trigger: AGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCC...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGTGCTGCAGGCTGAACTaGTCACACATTGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKCCRLN*SHIGVL
Trigger: CAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCA...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAATGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQCACLC*RALLCC
Trigger: GCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACA...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCATGCTTACGTGCATGTaGGTGTCTCTGCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIMLTCM*VSLLPC
Trigger: GCACGGCAGCAGAGACACGCACATGCACGTAAGCAT...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACAGTTGCACGCTCACATaGCTTTTCCCCTCTGAGACT +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYSCTLT*LFPSET
Trigger: AGTCTCAGAGGGGAAAAGGCATGTGAGCGTGCAACT...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR GCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGGTTCTGGCTGCCAGTTaGACGCTCACATGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKVLAAS*TLTCLF
Trigger: GAAAAGGCATGTGAGCGTGCAACTGGCAGCCAGAAC...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR CCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGGTACATCTTCTCCCTaGAGAATGGGTAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWGTSSP*RMGRRG
Trigger: ACCTCTCCTACCCATTCTCCAGGGAGAAGATGTACC...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACGGTACATCTTCTCCCTaGAGAATGGGTAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYGTSSP*RMGRRG
Trigger: ACCTCTCCTACCCATTCTCCAGGGAGAAGATGTACC...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGGGTACATCTTCTCCCTaGAGAATGGGTAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGGTSSP*RMGRRG
Trigger: ACCTCTCCTACCCATTCTCCAGGGAGAAGATGTACC...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATATTCATATCGTCCTCTaGACTATCGTATTCACCGTC +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHIHIVL*TIVFTV
Trigger: GACGGTGAATACGATAGTCCAGAGGACGATATGAAT...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTTTTTCTCTCGAACTTTaGTTTCATACTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAFSLEL*FHTQAW
Trigger: CCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAA...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTTCAAAGATGTTGTTCTaGATCAACTGCTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAASKMLF*INCFPN
Trigger: GTTGGGGAAGCAGTTGATCCAGAACAACATCTTTGA...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGGTGACAAAACCAAACTaGATGATCATTTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLVTKPN*MIISMY
Trigger: GTACATGGAAATGATCATCCAGTTTGGTTTTGTCAC...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGCACCCCAAAGACGATTaGGAATGTCAGGGCAATCAT +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWHPKDD*ECQGNH
Trigger: ATGATTGCCCTGACATTCTCAATCGTCTTTGGGGTG...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACCAAAACCAAACTGGATaGTCATTTCCATGTACTCCG +
Preference number: 4 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNQNQTG*SFPCTP
Trigger: CGGAGTACATGGAAATGATCATCCAGTTTGGTTTTG...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGCAGCCCCACTGCAAGTaGCTCAGTTTTCTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKQPHCK*LSFLVV
Trigger: CACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTG...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACCTCCAAACGTTTTTGTaGCGTGAAGTGGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYLQTFL*REVETS
Trigger: GCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAG...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACGAGAGACAGAGCGGCTaGAGTTGTTATTCGATACAC +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYERQSG*SCYSIH
Trigger: GTGTATCGAATAACAACTGCAGCCGCTCTGTCTCTC...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCTGCTGCAGGCTGAACTaGTCACACATTGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICICCRLN*SHIGVL
Trigger: CAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCA...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAACGTGCCCTCCTCTGCTaGAGGCTGAACTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQRALLC*RLNCSH
Trigger: GTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACG...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGAGGAACATGCTTACGTaGATGTGCGTGTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKRNMLT*MCVSLL
Trigger: CAGCAGAGACACGCACATGCACGTAAGCATGTTCCT...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAATGGGAATGCTCGCGGTaGCTGAGACTCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQWECSR*LRLWGG
Trigger: TCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCA...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGCCAGGTTTGGACCTTTaGACCTTACTATCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWPGLDL*TLLSGP
Trigger: TGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGG...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTTGCAATGCTGCCTCCTaGTTTGATCTCGTACATCTC +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCCNAAS*FDLVHL
Trigger: GAGATGTACGAGATCAAAGCAGGAGGCAGCATTGCA...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTCTTCTCCCTGGAGAATaGGTAGGAGAGGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCLLPGE*VGEVFH
Trigger: ATGAAAAACCTCTCCTACCCATTCTCCAGGGAGAAG...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTCACACATCTCTCTGCTaGGAATATCTTCTTCAATTG +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAHTSLC*EYLLQL
Trigger: CAATTGAAGAAGATATTCCCAGCAGAGAGATGTGTG...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTTTTGTTTCCAATTTCTaGACAGCAGACTGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GLDLCTLLSGPAAAPFSLFVSNF*TADWLL
Trigger: GAGCAACCAGTCTGCTGTCCAGAAATTGGAAACAAA...AAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACGTTCATCAGGTAACCTaGGAAACGATCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYVHQVT*ETILPG
Trigger: ACCTGGAAGGATCGTTTCCCAGGTTACCTGATGAAC...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTAACATCACGAGGTTCTaGAAGATTATGACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: VETSPGLDLCTLLSGPAANITRF*KIMTKA
Trigger: GGCTTTTGTCATAATCTTCCAGAACCTCGTGATGTT...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACCCACAAACCTCCCTTTaGAAAAGGCCACATAGAAGA +
Preference number: 4 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYPQTSL*KRPHRR
Trigger: TCTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTGG...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGTTAAACCTGCAGAACTaGACCTCCTGGTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWLNLQN*TSWSNC
Trigger: ACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAA...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCTTAATTTGCATCTGCTaGGACTGTGGCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICILICIC*DCGSPT
Trigger: AGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAA...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCAACGTTTTTGTGACGTaGAGTGGAGACAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICINVFVT*SGDKPR
Trigger: CCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTT...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR TCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCCTCCAAACGTTTTTGTaGCGTGAAGTGGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTLQTFL*REVETS
Trigger: GCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAG...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTGCAATGCTGCCTCCTaGTTTGATCTCGTACATTTC +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGCNAAS*FDLVHF
Trigger: GAAATGTACGAGATCAAAGCAGGAGGCAGCATTGCA...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327087.12
CDS-3UTR GCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGGAGCACACTCTTCCATaGGGTAACCATCGAATACAT +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGEHTLP*GNHRIH
Trigger: ATGTATTCGATGGTTACCGCATGGAAGAGTGTGCTC...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGATAGTAAGTAGGGGATaGTGTGCTCCTGACTGCATT +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWIVSRG*CAPDCI
Trigger: AATGCAGTCAGGAGCACAGCATCCCCTACTTACTAT...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGCCAGGTTTGGACCTTTaGACCTTACTATCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKPGLDL*TLLSGP
Trigger: TGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGG...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCCCAGGTTTGGACCTTTaGACCTTACTATCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTPGLDL*TLLSGP
Trigger: TGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGG...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTACAAAGATGGATCCCTaGCTTTTATTCTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCTKMDP*LLFSKS
Trigger: GGACTTGGAGAATAAAAGCCAGGGATCCATCTTTGT...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTGTATCCGGACAAAGATaGATCCCTGGCTTTTATTCT +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCVSGQR*IPGFYS
Trigger: AGAATAAAAGCCAGGGATCCATCTTTGTCCGGATAC...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGTTTCATACTCAGGCCTaGAATGTTCCTGGGCACGTT +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKFHTQA*NVPGHV
Trigger: AACGTGCCCAGGAACATTCCAGGCCTGAGTATGAAA...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000650848.1
CDS-3UTR CCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGTTCTGGACAGCAGACTaGTTGCTCTCCTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWFWTAD*LLSFSI
Trigger: AATGCTAAAGGAGAGCAACCAGTCTGCTGTCCAGAA...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTCTGGATGTTTCGAATaGGCAGAGTCAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGSGCFE*AESVSP
Trigger: TGGAGAAACTGACTCTGCCCATTCGAAACATCCAGA...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGAGATTCCGATATCTTTaGTTCTTACAGCATCCGGCC +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGRFRYL*FLQHPA
Trigger: GGCCGGATGCTGTAAGAACCAAAGATATCGGAATCT...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAACCTCAATTTTGGTaGGCCACTTGGCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQEPQFW*ATWPQR
Trigger: GCGCTGTGGCCAAGTGGCTCACCAAAATTGAGGTTC...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATCTCATAGATATTGTTTaGGATCAGAGAGTTAATACC +
Preference number: 4 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHLIDIV*DQRVNT
Trigger: GGTATTAACTCTCTGATCGCAAACAATATCTATGAG...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTTGTAACAAACTTCTTTaGATCGAGCCGCACTTCAAT +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCCNKLL*IEPHFN
Trigger: ATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACA...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGATAGTAAGTAGGGGATaGTGTGCTCCTGACTGCATT +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKIVSRG*CAPDCI
Trigger: AATGCAGTCAGGAGCACAGCATCCCCTACTTACTAT...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGGTATCCGGACAAAGATaGATCCCTGGCTTTTATTCT +
Preference number: 4 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGVSGQR*IPGFYS
Trigger: AGAATAAAAGCCAGGGATCCATCTTTGTCCGGATAC...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGTCTGGATGTTTCGAATaGGCAGAGTCAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKSGCFE*AESVSP
Trigger: TGGAGAAACTGACTCTGCCCATTCGAAACATCCAGA...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGAGATTCCGATATCTTTaGTTCTTACAGCATCCGGCC +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKRFRYL*FLQHPA
Trigger: GGCCGGATGCTGTAAGAACCAAAGATATCGGAATCT...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACATCACGAGGTTCTaGAAGATTATGACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCNITRF*KIMTKA
Trigger: GGCTTTTGTCATAATCTTCCAGAACCTCGTGATGTT...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCCCACAAACCTCCCTTTaGAAAAGGCCACATAGAAGA +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIPQTSL*KRPHRR
Trigger: TCTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTGG...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCGGTCACACATCTCTCTaGTGGGAATATCTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTGHTSL*WEYLLQ
Trigger: TTGAAGAAGATATTCCCAGCAGAGAGATGTGTGACC...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGTGTAACAAACTTCTTTaGATCGAGCCGCACTTCAAT +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWCNKLL*IEPHFN
Trigger: ATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACA...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAATCAGGTCCAGCGGCTaGACCATTCAGCCTTGTAAC +
Preference number: 4 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQIRSSG*TIQPCN
Trigger: GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGAT...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGCACACATCTCTCTGCTaGGAATATCTTCTTCAATTG +
Preference number: 4 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWHTSLC*EYLLQL
Trigger: CAATTGAAGAAGATATTCCCAGCAGAGAGATGTGTG...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGTCCCCTCCTTCAGCTaGCTGACGTTGAAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQVPSFS*LTLKKE
Trigger: CTCCTTTTTCAACGTCAGCCAGCTGAAGGAGGGGAC...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCCAAAACCAAACTGGATaGTCATTTCCATGTACTCCG +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIQNQTG*SFPCTP
Trigger: CGGAGTACATGGAAATGATCATCCAGTTTGGTTTTG...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAAACGTTTTTGTGACGTaGAGTGGAGACAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQNVFVT*SGDKPR
Trigger: CCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTT...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CCA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCTTTTCTCTCGAACTTTaGTTTCATACTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIFSLEL*FHTQAW
Trigger: CCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAA...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR GCA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTCTCATAGATATTGTTTaGGATCAGAGAGTTAATACC +
Preference number: 4 (lower is better)
Translates to: FASAETVAAPLQVTQFSCLIDIV*DQRVNT
Trigger: GGTATTAACTCTCTGATCGCAAACAATATCTATGAG...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGGTGACAAAACCAAACTaGATGATCATTTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKVTKPN*MIISMY
Trigger: GTACATGGAAATGATCATCCAGTTTGGTTTTGTCAC...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAAGATTCCGATATCTTTaGTTCTTACAGCATCCGGCC +
Preference number: 4 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQRFRYL*FLQHPA
Trigger: GGCCGGATGCTGTAAGAACCAAAGATATCGGAATCT...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR TCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAATGTCAGGGCAATCATaGATAAGATGGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQMSGQS*IRWRQS
Trigger: ACTTTGCCTCCATCTTATTCATGATTGCCCTGACAT...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAACAAAGATGGATCCCTaGCTTTTATTCTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQTKMDP*LLFSKS
Trigger: GGACTTGGAGAATAAAAGCCAGGGATCCATCTTTGT...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CCA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAAACATCACGAGGTTCTaGAAGATTATGACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQNITRF*KIMTKA
Trigger: GGCTTTTGTCATAATCTTCCAGAACCTCGTGATGTT...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCGTGGCCAGGGAAGCCTaGGGCCAGGTGCACCCCGCG +
Preference number: 5 (lower is better)
Translates to: PQGTWECSRCLRLWGGETVAREA*GQVHPA
Trigger: CGCGGGGTGCACCTGGCCCAAGGCTTCCCTGGCCAC...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS GCA 90 bp CCAGCTGGCTTTGGCCTGAAGGTGCTGAGCTGGCTGCCCGGCTCCTaGTTCGATCCCCACCTCCTGGGCTCCTCAGAGCCGGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: PAGFGLKVLSWLPGS*FDPHLLGSSEPAHP
Trigger: TGGATGAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCAGCTCAGCACCTTCAGGCCAAAGCCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS-3UTR CAA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGGTGGCCAGGGAAGCCTaGGGCCAGGTGCACCCCGCG +
Preference number: 5 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPEVAREA*GQVHPA
Trigger: CGCGGGGTGCACCTGGCCCAAGGCTTCCCTGGCCAC...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS GCA 90 bp CTCTCTCCACCGCAGGGCTGGCCAGGATCTCTGTTGGAACCGCCCTaGAGACCTGGGGCCCGGGGACCTGGCATCTTGAGACACTGCTGT +
Preference number: 5 (lower is better)
Translates to: LSPPQGWPGSLLEPP*RPGARGPGILRHCC
Trigger: ACAGCAGTGTCTCAAGATGCCAGGTCCCCGGGCCCCAGGTCTGCAGGGCGGTTCCAACAGAGATCCTGGCCAGCCCTGCGGTGGAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS-3UTR CAA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGCACTGCTGTCCATGTTaGGGGCCCTGGCCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRHCCPC*GPWPPL
Trigger: CAGAGGGGGCCAGGGCCCCAAACATGGACAGCAGTG...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGGCTCCTGGGCATCTaGGGTGCTTGGGAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWRLLGI*GAWELL
Trigger: AAGCAGCTCCCAAGCACCCAAGATGCCCAGGAGCCT...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR CAA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGGGGCATCTTGGGTGCTaGGGAGCTGCTTCACCAAGT +
Preference number: 5 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWGHLGC*GAASPS
Trigger: ACTTGGTGAAGCAGCTCCCAAGCACCCAAGATGCCC...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR CAA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCGGGGACCTGGCATCTaGAGACACTGCTGTCCATGT +
Preference number: 5 (lower is better)
Translates to: APGYMGMLAVPETLGWRDRGPGI*RHCCPC
Trigger: ACATGGACAGCAGTGTCTCAAGATGCCAGGTCCCCG...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACGTGGCCAGGGAAGCCTaGGGCCAGGTGCACCCCGCG +
Preference number: 5 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNVAREA*GQVHPA
Trigger: CGCGGGGTGCACCTGGCCCAAGGCTTCCCTGGCCAC...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS GCA 90 bp GAACTGCTCACACATTGGTGTGCTGAGAGCCTGACGACATCATGCTaGCCAGCTGGCTTTGGCCTGAAGGTGCTGAGCTGGCTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: ELLTHWCAESLTTSC*PAGFGLKVLSWLPG
Trigger: GCCGGGCAGCCAGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCAGCACACCAATGTGTGAGCAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS CCA 90 bp ACACGGAGACCAGGTCCTGGTGCCAGCTCTGCCACTTCTCATCTTTaGCACCTTGGCAACGTCACACCTGAGTCACCCCAGGGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: TRRPGPGASSATSHL*HLGNVTPESPQGSA
Trigger: GGCAGAGCCCTGGGGTGACTCAGGTGTGACGTTGCCAAGGTGCCAAAGATGAGAAGTGGCAGAGCTGGCACCAGGACCTGGTCTCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544988.1
CDS CCA 90 bp TTTCCCCCAGCCCAGGGCAGTGGGGGAAACACGGAGACCAGGTCCTaGTGCCAGCTCTGCCACTTCTCATCTTTGGCACCTTGGCAACGT +
Preference number: 5 (lower is better)
Translates to: FPPAQGSGGNTETRS*CQLCHFSSLAPWQR
Trigger: ACGTTGCCAAGGTGCCAAAGATGAGAAGTGGCAGAGCTGGCACCAGGACCTGGTCTCCGTGTTTCCCCCACTGCCCTGGGCTGGGGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544988.1
CDS-3UTR CAA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGTTGCCTGTCTCCCCATaGGAGACGATAGCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRLPVSP*ETIASE
Trigger: CTCGCTGGCTATCGTCTCCAATGGGGAGACAGGCAA...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGTTAATACCCATCGTGTaGTTGGCTCGGGAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWLIPIV*LAREQA
Trigger: AGCCTGCTCCCGAGCCAACAACACGATGGGTATTAA...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGTTCAGCTGGCTGACGTaGAAAAAGGAGAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWFSWLT*KKERVW
Trigger: CCACACCCTCTCCTTTTTCAACGTCAGCCAGCTGAA...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS GCA 90 bp GCTGAACTGCTCACACATTGGTGTGCTGAGAGCCTGACGACATCATaGTGCCCAGCTGGCTTTGGCCTGAAGGTGCTGAGCTGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AELLTHWCAESLTTS*CPAGFGLKVLSWLP
Trigger: GGGCAGCCAGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCAGCACACCAATGTGTGAGCAGTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS-3UTR CAA 90 bp CTCTTCAAGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGATACCCATCGTGTTGTaGGCTCGGGAGCAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LFKTPSSQAPADRQHAMWIPIVL*AREQAV
Trigger: CACAGCCTGCTCCCGAGCCAACAACACGATGGGTAT...CCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGATTCAGCTGGCTGACGTaGAAAAAGGAGAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRFSWLT*KKERVW
Trigger: CCACACCCTCTCCTTTTTCAACGTCAGCCAGCTGAA...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGGCTCATCCATCAGCTaGAGCTTCTCATGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRGSSIS*SFSCSS
Trigger: AGAGGAGCATGAGAAGCTCAAGCTGATGGATGAGCC...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CAA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGGAGACAAGCCCAGGTTaGGACCTTTGCACCTTACTA +
Preference number: 5 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWETSPG*DLCTLL
Trigger: TAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTC...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CAA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACCACTGCTGTCCATGTTaGGGGCCCTGGCCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNHCCPC*GPWPPL
Trigger: CAGAGGGGGCCAGGGCCCCAAACATGGACAGCAGTG...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGTTAATACCCATCGTGTaGTTGGCTCGGGAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRLIPIV*LAREQA
Trigger: AGCCTGCTCCCGAGCCAACAACACGATGGGTATTAA...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGGAGCGTGTAGCCTTATaGAGAGACAGAGCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTERVAL*RDRAAA
Trigger: TGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTC...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCCGCACTTCAATGACGTaGTTGAGGAGGGCAAACACA +
Preference number: 5 (lower is better)
Translates to: PQGTWECSRCLRLWGGETRTSMT*LRRANT
Trigger: TGTGTTTGCCCTCCTCAACAACGTCATTGAAGTGCG...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGCAGATTCCGATATCTTaGGTTCTTACAGCATCCGGC +
Preference number: 5 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWQIPIS*VLTASG
Trigger: GCCGGATGCTGTAAGAACCAAAGATATCGGAATCTG...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAAGCTCTTCTCTTTCTaGATCTGGTCGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWKLFSF*IWSLMS
Trigger: GGACATCAGCGACCAGATCAAGAAAGAGAAGAGCTT...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CAA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCGAGACAAGCCCAGGTTaGGACCTTTGCACCTTACTA +
Preference number: 5 (lower is better)
Translates to: PQGTWECSRCLRLWGGETETSPG*DLCTLL
Trigger: TAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTC...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS GCA 90 bp CGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGTCTCTaGTGCCGTGCCCTCCTCTGCTGCAGGCTGAACTGCTCACACATT +
Preference number: 5 (lower is better)
Translates to: RHVGVGTCLRACACL*CRALLCCRLNCSHI
Trigger: AATGTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS GCA 90 bp TCTAGAGAAAGGAAGTCCACAGTGTTTCCTGCTCATCTGGATCCCTaGCCTTCCAGAGGTGCTTTCCCCCAGCCCAGGGCAGTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: SRERKSTVFPAHLDP*PSRGAFPQPRAVGE
Trigger: TTCCCCCACTGCCCTGGGCTGGGGGAAAGCACCTCTGGAAGGGCAGGGATCCAGATGAGCAGGAAACACTGTGGACTTCCTTTCTCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544988.1
CDS CCA 90 bp TTCAGGGGAAGACACTGGGGACCAACTGCTGCTTCCAGAGGCTCCTaGGCATCTTGGGTGCTTGGGAGCTGCTTCACCAAGTCACACACT +
Preference number: 5 (lower is better)
Translates to: FRGRHWGPTAASRGS*ASWVLGSCFTKSHT
Trigger: AGTGTGTGACTTGGTGAAGCAGCTCCCAAGCACCCAAGATGCCCAGGAGCCTCTGGAAGCAGCAGTTGGTCCCCAGTGTCTTCCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS-3UTR CAA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCCACACTCCGTCGTGTTaGTTTCCAATTTCTGGACAG +
Preference number: 5 (lower is better)
Translates to: PQGTWECSRCLRLWGGETHTPSC*FPISGQ
Trigger: CTGTCCAGAAATTGGAAACAAACACGACGGAGTGTG...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGACACACTCCGTCGTGTTaGTTTCCAATTTCTGGACAG +
Preference number: 5 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRHTPSC*FPISGQ
Trigger: CTGTCCAGAAATTGGAAACAAACACGACGGAGTGTG...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGATCACCCCAAAGACGATaGAGAATGTCAGGGCAATCA +
Preference number: 5 (lower is better)
Translates to: GAPGYMGMLAVPETLGWRSPQRR*RMSGQS
Trigger: TGATTGCCCTGACATTCTCAATCGTCTTTGGGGTGA...TCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGGAGCGTGTAGCCTTATaGAGAGACAGAGCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMERVAL*RDRAAA
Trigger: TGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTC...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACACTTCAATGACGTTGTaGAGGAGGGCAAACACAGGT +
Preference number: 5 (lower is better)
Translates to: APGYMGMLAVPETLGWRDTSMTL*RRANTG
Trigger: ACCTGTGTTTGCCCTCCTCAACAACGTCATTGAAGT...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGGAGACAAGCCCAGGTTaGGACCTTTGCACCTTACTA +
Preference number: 5 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRETSPG*DLCTLL
Trigger: TAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTC...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS TCA 90 bp ACTCCTACTGCCCTATGTTCATGGCACCCTGGAAAGGGAGGGACATaGCATTCCCTGAGGCCATCCCTACAGATCCACCCCACCTCTAGC +
Preference number: 5 (lower is better)
Translates to: TPTALCSWHPGKGGT*HSLRPSLQIHPTSS
Trigger: GCTAGAGGTGGGGTGGATCTGTAGGGATGGCCTCAGGGAATGTCATGTCCCTCCCTTTCCAGGGTGCCATGAACATAGGGCAGTAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538154.5
CDS GCA 90 bp CATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGCAGGCTGAACTGCTCACACATTGGT +
Preference number: 5 (lower is better)
Translates to: HVGVGTCLRACACLC*RALLCCRLNCSHIG
Trigger: ACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS CCA 90 bp GCACCCTGTCCTCCTCACTCCTACTGCCCTATGTTCATGGCACCCTaGAAAGGGAGGGACATGACATTCCCTGAGGCCATCCCTACAGAT +
Preference number: 5 (lower is better)
Translates to: APCPPHSYCPMFMAP*KGRDMTFPEAIPTD
Trigger: ATCTGTAGGGATGGCCTCAGGGAATGTCATGTCCCTCCCTTTCCAGGGTGCCATGAACATAGGGCAGTAGGAGTGAGGAGGACAGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538154.5
ENST00000540543.1
CDS-3UTR CAA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACCACTGCTGTCCATGTTaGGGGCCCTGGCCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYHCCPC*GPWPPL
Trigger: CAGAGGGGGCCAGGGCCCCAAACATGGACAGCAGTG...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTCGGGGACCTGGCATCTaGAGACACTGCTGTCCATGT +
Preference number: 5 (lower is better)
Translates to: VETSPGLDLCTLLSGPAARGPGI*RHCCPC
Trigger: ACATGGACAGCAGTGTCTCAAGATGCCAGGTCCCCG...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCATACCCATCGTGTTGTaGGCTCGGGAGCAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGIPIVL*AREQAV
Trigger: CACAGCCTGCTCCCGAGCCAACAACACGATGGGTAT...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGATTTTCTCTCGAACTTaGGTTTCATACTCAGGCCTG +
Preference number: 5 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWIFSRT*VSYSGL
Trigger: CAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAAT...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGCACACTCCGTCGTGTTaGTTTCCAATTTCTGGACAG +
Preference number: 5 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRHTPSC*FPISGQ
Trigger: CTGTCCAGAAATTGGAAACAAACACGACGGAGTGTG...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGACTGTCACCCGGACATaGGAGCGTGTAGCCTTATTG +
Preference number: 5 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLTVTRT*ERVALL
Trigger: CAATAAGGCTACACGCTCCAATGTCCGGGTGACAGT...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGACTGTCACCCGGACATaGGAGCGTGTAGCCTTATTG +
Preference number: 5 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMTVTRT*ERVALL
Trigger: CAATAAGGCTACACGCTCCAATGTCCGGGTGACAGT...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTTCGGAACCTCAATTTaGGTGAGCCACTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTFGTSI*VSHLAT
Trigger: TGTGGCCAAGTGGCTCACCAAAATTGAGGTTCCGAA...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGGGCTCATCCATCAGCTaGAGCTTCTCATGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMGSSIS*SFSCSS
Trigger: AGAGGAGCATGAGAAGCTCAAGCTGATGGATGAGCC...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS CCA 90 bp GGAGAATGGGTAGGAGAGGTTTTTCATCTTGTTGTTGCTGTGTTCTaGAACTCGGGGCTGCAGGTGCGAGCTCAGCTTCTGCAGAGCCGC +
Preference number: 5 (lower is better)
Translates to: GEWVGEVFHLVVAVF*NSGLQVRAQLLQSR
Trigger: GCGGCTCTGCAGAAGCTGAGCTCGCACCTGCAGCCCCGAGTTCCAGAACACAGCAACAACAAGATGAAAAACCTCTCCTACCCATTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000544988.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS-3UTR CAA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTTGGCCAGGATCTCTGTaGGAACCGCCCTGCAGACCT +
Preference number: 5 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCWPGSL*EPPCRP
Trigger: AGGTCTGCAGGGCGGTTCCAACAGAGATCCTGGCCA...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGTTCTTGGTAGGAACTTaGATCTTCAAGAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: EGAPGYMGMLAVPETLGWFLVGT*IFKNSA
Trigger: GGCAGAATTCTTGAAGATCAAAGTTCCTACCAAGAA...CCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACCTTTTTCATCTTGTTGTaGCTGTGTTCTGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: PQGTWECSRCLRLWGGETFFILL*LCSGTR
Trigger: CCGAGTTCCAGAACACAGCAACAACAAGATGAAAAA...GGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGTCCTTTTCCTGGATGTaGTACAGGTACATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRSFSWM*YRYIFS
Trigger: GGAGAAGATGTACCTGTACAACATCCAGGAAAAGGA...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGCGCACTTCAATGACGTaGTTGAGGAGGGCAAACACA +
Preference number: 5 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLRTSMT*LRRANT
Trigger: TGTGTTTGCCCTCCTCAACAACGTCATTGAAGTGCG...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS GCA 90 bp GTGGAATATATTCACACACACAGGAGTGCATGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGCAGGCTGAACTGCTCACACATTGGT +
Preference number: 5 (lower is better)
Translates to: VEYIHTHRSACACLC*RALLCCRLNCSHIG
Trigger: ACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACTCCTGTGTGTGTGAATATATTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS-3UTR CAA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTGGCCAGGATCTCTGTaGGAACCGCCCTGCAGACCT +
Preference number: 5 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYWPGSL*EPPCRP
Trigger: AGGTCTGCAGGGCGGTTCCAACAGAGATCCTGGCCA...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACCCAGCCTCCATCAGATaGTGCTCAAATTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNPASIR*CSNSSR
Trigger: GCGGGAGGAATTTGAGCACAATCTGATGGAGGCTGG...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGTCCTTTTCCTGGATGTaGTACAGGTACATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPESFSWM*YRYIFS
Trigger: GGAGAAGATGTACCTGTACAACATCCAGGAAAAGGA...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTTAATACCCATCGTGTaGTTGGCTCGGGAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHLIPIV*LAREQA
Trigger: AGCCTGCTCCCGAGCCAACAACACGATGGGTATTAA...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCACACTCCGTCGTGTTaGTTTCCAATTTCTGGACAG +
Preference number: 5 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMHTPSC*FPISGQ
Trigger: CTGTCCAGAAATTGGAAACAAACACGACGGAGTGTG...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGTCACCCCAAAGACGATaGAGAATGTCAGGGCAATCA +
Preference number: 5 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMSPQRR*RMSGQS
Trigger: TGATTGCCCTGACATTCTCAATCGTCTTTGGGGTGA...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGCTGATAACAGAGAACTaGCCAATTCCAGAGAGAATG +
Preference number: 5 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRLITEN*PIPERM
Trigger: CATTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAG...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGAAGCTCTTCTCTTTCTaGATCTGGTCGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMKLFSF*IWSLMS
Trigger: GGACATCAGCGACCAGATCAAGAAAGAGAAGAGCTT...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CAA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCCCCAGGTTTGGACCTTaGCACCTTACTATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGPRFGP*HLTIRS
Trigger: GGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGG...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CAA 90 bp GCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGACTCTGGGGTGGAGAGACTCGTACATCTCTTTCTaGGTAGGAACTTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: APGYMGMLAVPETLGWRDSYISF*VGTLIF
Trigger: GAAGATCAAAGTTCCTACCAAGAAAGAGATGTACGA...GTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS GCA 90 bp GAGAGGTTTTTCATCTTGTTGTTGCTGTGTTCTGGAACTCGGGGCTaGAGGTGCGAGCTCAGCTTCTGCAGAGCCGCGCTGAACTTCTTT +
Preference number: 5 (lower is better)
Translates to: ERFFILLLLCSGTRG*RCELSFCRAALNFF
Trigger: AAAGAAGTTCAGCGCGGCTCTGCAGAAGCTGAGCTCGCACCTGCAGCCCCGAGTTCCAGAACACAGCAACAACAAGATGAAAAACCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000544988.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 90 bp GGAAATGTTAACTGGATGGCTGATACGAAGAGGGGCCCAGTGCTTTaGAGAGCAGTTTCACCAGAGGCAGAGGGATATCCCTGGTCATCC +
Preference number: 5 (lower is better)
Translates to: GNVNWMADTKRGPVL*RAVSPEAEGYPWSS
Trigger: GGATGACCAGGGATATCCCTCTGCCTCTGGTGAAACTGCTCTGCAAAGCACTGGGCCCCTCTTCGTATCAGCCATCCAGTTAACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS CCA 90 bp GCTCTTCTCTTTCTTGATCTGGTCGCTGATGTCCGTGGGGATGTCTaGAATCATCCAGTCCACGAGGACGCTCAGGAACATCACGAGGTT +
Preference number: 5 (lower is better)
Translates to: ALLFLDLVADVRGDV*NHPVHEDAQEHHEV
Trigger: AACCTCGTGATGTTCCTGAGCGTCCTCGTGGACTGGATGATTCCAGACATCCCCACGGACATCAGCGACCAGATCAAGAAAGAGAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS-3UTR CAA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGTGGCCAGGATCTCTGTaGGAACCGCCCTGCAGACCT +
Preference number: 5 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKWPGSL*EPPCRP
Trigger: AGGTCTGCAGGGCGGTTCCAACAGAGATCCTGGCCA...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTTTGCCTGTCTCCCCATaGGAGACGATAGCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: FASAETVAAPLQVTQFSCLPVSP*ETIASE
Trigger: CTCGCTGGCTATCGTCTCCAATGGGGAGACAGGCAA...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTTTTTCATCTTGTTGTaGCTGTGTTCTGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: ARPLQTDSTPCGCRNMLTFFILL*LCSGTR
Trigger: CCGAGTTCCAGAACACAGCAACAACAAGATGAAAAA...CGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGATACCCATCGTGTTGTaGGCTCGGGAGCAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGIPIVL*AREQAV
Trigger: CACAGCCTGCTCCCGAGCCAACAACACGATGGGTAT...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCTCACCCCAAAGACGATaGAGAATGTCAGGGCAATCA +
Preference number: 5 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCSPQRR*RMSGQS
Trigger: TGATTGCCCTGACATTCTCAATCGTCTTTGGGGTGA...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGAACATGACAGAGCGGCTGCAGTaGTTATTCGATACACTATCA +
Preference number: 5 (lower is better)
Translates to: HQARPLQTDSTPCGCRNMTERLQ*LFDTLS
Trigger: TGATAGTGTATCGAATAACAACTGCAGCCGCTCTGT...CATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGTTCGGAACCTCAATTTaGGTGAGCCACTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: QTDSTPCGCRNMLTCMCVFGTSI*VSHLAT
Trigger: TGTGGCCAAGTGGCTCACCAAAATTGAGGTTCCGAA...CACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTTCGGAACCTCAATTTaGGTGAGCCACTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHFGTSI*VSHLAT
Trigger: TGTGGCCAAGTGGCTCACCAAAATTGAGGTTCCGAA...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCCAGATTCCGATATCTTaGGTTCTTACAGCATCCGGC +
Preference number: 5 (lower is better)
Translates to: GDKPRFGPLHLTIRSSGCQIPIS*VLTASG
Trigger: GCCGGATGCTGTAAGAACCAAAGATATCGGAATCTG...GCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTCAGCTGGCTGACGTaGAAAAAGGAGAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNFSWLT*KKERVW
Trigger: CCACACCCTCTCCTTTTTCAACGTCAGCCAGCTGAA...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGCCCAGGTTTGGACCTTaGCACCTTACTATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALPRFGP*HLTIRS
Trigger: GGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGG...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CAA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATGAGACAAGCCCAGGTTaGGACCTTTGCACCTTACTA +
Preference number: 5 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHETSPG*DLCTLL
Trigger: TAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTC...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CAA 90 bp AGACCCCATCAAGCCAGGCCCCTGCAGACAGACAGCACGCCATGTGGGTGTAGGTCGTACATCTCTTTCTaGGTAGGAACTTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: RPHQARPLQTDSTPCGCRSYISF*VGTLIF
Trigger: GAAGATCAAAGTTCCTACCAAGAAAGAGATGTACGA...CCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTGGTTCTGGCTGCCAGTaGCACGCTCACATGCCTTTT +
Preference number: 5 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCGSGCQ*HAHMPF
Trigger: AAAAGGCATGTGAGCGTGCAACTGGCAGCCAGAACC...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS GCA 90 bp GTAGGAACTTTGATCTTCAAGAATTCTGCCTCTCTGGCCAGCACCTaGCACGGGGCGTGTATCCGGACAAAGATGGATCCCTGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: VGTLIFKNSASLAST*HGACIRTKMDPWLL
Trigger: TAAAAGCCAGGGATCCATCTTTGTCCGGATACACGCCCCGTGGCAGGTGCTGGCCAGAGAGGCAGAATTCTTGAAGATCAAAGTTCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000541487.1
ENST00000544988.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 90 bp TCTTCTCCCTGGAGAATGGGTAGGAGAGGTTTTTCATCTTGTTGTTaGTGTGTTCTGGAACTCGGGGCTGCAGGTGCGAGCTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SSPWRMGRRGFSSCC*CVLELGAAGASSAS
Trigger: AGAAGCTGAGCTCGCACCTGCAGCCCCGAGTTCCAGAACACAGCAACAACAAGATGAAAAACCTCTCCTACCCATTCTCCAGGGAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000544988.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 90 bp TATGTGGAATATATTCACACACACAGGAGTGCATGTGCGTGTCTCTaGTGCCGTGCCCTCCTCTGCTGCAGGCTGAACTGCTCACACATT +
Preference number: 5 (lower is better)
Translates to: YVEYIHTHRSACACL*CRALLCCRLNCSHI
Trigger: AATGTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACTCCTGTGTGTGTGAATATATTCCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS-3UTR CAA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGTTGCCTGTCTCCCCATaGGAGACGATAGCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKLPVSP*ETIASE
Trigger: CTCGCTGGCTATCGTCTCCAATGGGGAGACAGGCAA...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTCCAGCCTCCATCAGATaGTGCTCAAATTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: FASAETVAAPLQVTQFSCPASIR*CSNSSR
Trigger: GCGGGAGGAATTTGAGCACAATCTGATGGAGGCTGG...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGCCAGCCTCCATCAGATaGTGCTCAAATTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWPASIR*CSNSSR
Trigger: GCGGGAGGAATTTGAGCACAATCTGATGGAGGCTGG...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGTTCTTGGTAGGAACTTaGATCTTCAAGAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPEFLVGT*IFKNSA
Trigger: GGCAGAATTCTTGAAGATCAAAGTTCCTACCAAGAA...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGTTTTTCATCTTGTTGTaGCTGTGTTCTGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLFFILL*LCSGTR
Trigger: CCGAGTTCCAGAACACAGCAACAACAAGATGAAAAA...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTGATTTTCTCTCGAACTTaGGTTTCATACTCAGGCCTG +
Preference number: 5 (lower is better)
Translates to: RNMLTCMCVSLLPCPPLLIFSRT*VSYSGL
Trigger: CAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAAT...CAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAGCGTGTAGCCTTATaGAGAGACAGAGCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWERVAL*RDRAAA
Trigger: TGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTC...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGTTGAGCAAGAAAGCTTaGAGGATCAGGCGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: QTDSTPCGCRNMLTCMCVLSKKA*RIRRSS
Trigger: TGAAGAGCGCCTGATCCTCAAAGCTTTCTTGCTCAA...CACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTCAGATTCCGATATCTTaGGTTCTTACAGCATCCGGC +
Preference number: 5 (lower is better)
Translates to: VETSPGLDLCTLLSGPAAQIPIS*VLTASG
Trigger: GCCGGATGCTGTAAGAACCAAAGATATCGGAATCTG...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCCAGATTCCGATATCTTaGGTTCTTACAGCATCCGGC +
Preference number: 5 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGQIPIS*VLTASG
Trigger: GCCGGATGCTGTAAGAACCAAAGATATCGGAATCTG...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCAAGCTCTTCTCTTTCTaGATCTGGTCGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGKLFSF*IWSLMS
Trigger: GGACATCAGCGACCAGATCAAGAAAGAGAAGAGCTT...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS TCA 90 bp TCGGTAATCCTTAAACCTGCAGAACTGAACCTCCTGGTCAAACTGTaGGTTTTCTGGCTGCGTCCCCTCCTTCAGCTGGCTGACGTTGAA +
Preference number: 5 (lower is better)
Translates to: SVILKPAELNLLVKL*VFWLRPLLQLADVE
Trigger: TTCAACGTCAGCCAGCTGAAGGAGGGGACGCAGCCAGAAAACTCACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAAGGATTACCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 90 bp GGTTCTTACAGCATCCGGCCGTCTCAGCTCTGTAACAAACTTCTTTaGATCGAGCCGCACTTCAATGACGTTGTTGAGGAGGGCAAACAC +
Preference number: 5 (lower is better)
Translates to: GSYSIRPSQLCNKLL*IEPHFNDVVEEGKH
Trigger: GTGTTTGCCCTCCTCAACAACGTCATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACAGAGCTGAGACGGCCGGATGCTGTAAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 90 bp CTCGTACATCTCTTTCTTGGTAGGAACTTTGATCTTCAAGAATTCTaGCTCTCTGGCCAGCACCTGCCACGGGGCGTGTATCCGGACAAA +
Preference number: 5 (lower is better)
Translates to: LVHLFLGRNFDLQEF*LSGQHLPRGVYPDK
Trigger: TTTGTCCGGATACACGCCCCGTGGCAGGTGCTGGCCAGAGAGGCAGAATTCTTGAAGATCAAAGTTCCTACCAAGAAAGAGATGTACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS CCA 90 bp GGGATAGCGCCGGTGTTGAGAAAAAGAGAGGAAATGTTAACTGGATaGCTGATACGAAGAGGGGCCCAGTGCTTTGCAGAGCAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: GIAPVLRKREEMLTG*LIRRGAQCFAEQFH
Trigger: GTGAAACTGCTCTGCAAAGCACTGGGCCCCTCTTCGTATCAGCCATCCAGTTAACATTTCCTCTCTTTTTCTCAACACCGGCGCTATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS CCA 90 bp GGACAGCAGACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTTaGTTTCATACTCAGGCCTGGAATGTTCCTGGGCACGTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GQQTGCSPLAFSLEL*FHTQAWNVPGHVPG
Trigger: CCCAGGAACGTGCCCAGGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS-3UTR CAA 90 bp GGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGGAATGCTCGCGGTGCCTGAGTCGTACATTTCTTTCTaGGTAGGAACTTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: GEVQEGAPGYMGMLAVPESYISF*VGTLIF
Trigger: GAAGATCAAAGTTCCTACCAAGAAAGAAATGTACGA...CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327087.12
CDS-3UTR CAA 90 bp GTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTTCCTTTTCCTGGATGTaGTACAGGTACATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VETSPGLDLCTLLSGPAASFSWM*YRYIFS
Trigger: GGAGAAGATGTACCTGTACAACATCCAGGAAAAGGA...AGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCATACCCATCGTGTTGTaGGCTCGGGAGCAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIIPIVL*AREQAV
Trigger: CACAGCCTGCTCCCGAGCCAACAACACGATGGGTAT...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCACAGAGCGGCTGCAGTaGTTATTCGATACACTATCA +
Preference number: 5 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGTERLQ*LFDTLS
Trigger: TGATAGTGTATCGAATAACAACTGCAGCCGCTCTGT...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCGAGCGTGTAGCCTTATaGAGAGACAGAGCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTERVAL*RDRAAA
Trigger: TGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTC...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGACTGTCACCCGGACATaGGAGCGTGTAGCCTTATTG +
Preference number: 5 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWTVTRT*ERVALL
Trigger: CAATAAGGCTACACGCTCCAATGTCCGGGTGACAGT...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACACTTCAATGACGTTGTaGAGGAGGGCAAACACAGGT +
Preference number: 5 (lower is better)
Translates to: GPLHLTIRSSGCTIQPCNTSMTL*RRANTG
Trigger: ACCTGTGTTTGCCCTCCTCAACAACGTCATTGAAGT...GTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGACTTCAATGACGTTGTaGAGGAGGGCAAACACAGGT +
Preference number: 5 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALTSMTL*RRANTG
Trigger: ACCTGTGTTTGCCCTCCTCAACAACGTCATTGAAGT...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTCGCACTTCAATGACGTaGTTGAGGAGGGCAAACACA +
Preference number: 5 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCRTSMT*LRRANT
Trigger: TGTGTTTGCCCTCCTCAACAACGTCATTGAAGTGCG...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGTTCAGCTGGCTGACGTaGAAAAAGGAGAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWFSWLT*KKERVW
Trigger: CCACACCCTCTCCTTTTTCAACGTCAGCCAGCTGAA...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGAAGCTCTTCTCTTTCTaGATCTGGTCGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: VWTFAPYYQVQRLHHSALKLFSF*IWSLMS
Trigger: GGACATCAGCGACCAGATCAAGAAAGAGAAGAGCTT...CAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CAA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGGGCTCATCCATCAGCTaGAGCTTCTCATGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGGSSIS*SFSCSS
Trigger: AGAGGAGCATGAGAAGCTCAAGCTGATGGATGAGCC...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CAA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACCCCAGGTTTGGACCTTaGCACCTTACTATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYPRFGP*HLTIRS
Trigger: GGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGG...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS GCA 90 bp CTCGTACATTTCTTTCTTGGTAGGAACTTTGATCTTCAAGAATTCTaGCTCTCTGGCCAGCACCTGCCACGGGGCGTGTATCCGGACAAA +
Preference number: 5 (lower is better)
Translates to: LVHFFLGRNFDLQEF*LSGQHLPRGVYPDK
Trigger: TTTGTCCGGATACACGCCCCGTGGCAGGTGCTGGCCAGAGAGGCAGAATTCTTGAAGATCAAAGTTCCTACCAAGAAAGAAATGTACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327087.12
CDS GCA 90 bp GATCTCGTACATTTTCTTGGTAGGAACTTTGATCTTCAAGAATTCTaGCTCTCTGGCCAGCACCTGCCACGGGGCGTGTATCCGGACAAA +
Preference number: 5 (lower is better)
Translates to: DLVHFLGRNFDLQEF*LSGQHLPRGVYPDK
Trigger: TTTGTCCGGATACACGCCCCGTGGCAGGTGCTGGCCAGAGAGGCAGAATTCTTGAAGATCAAAGTTCCTACCAAGAAAATGTACGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544988.1
ENST00000682330.1
CDS GCA 90 bp ATGGAGTTGAGGGGTGGAGACATGCCAACGTGTTGTCCAAACACATaGCCGAGTTCTTGCCTCTCTTGTATTCTACAAAAGCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: MELRGGDMPTCCPNT*PSSCLSCILQKPSG
Trigger: CCCAGAAGGCTTTTGTAGAATACAAGAGAGGCAAGAACTCGGGCATGTGTTTGGACAACACGTTGGCATGTCTCCACCCCTCAACTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541874.1
CDS GCA 90 bp AACTTTAACTTTCAACAAGCCAACTCCCAGCTGGAGAAACAGATGTaGCCCACAGCTGGGAGTGAGGGCAACAACAAAACTCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: NFNFQQANSQLEKQM*PTAGSEGNNKTPSL
Trigger: CAGGGAAGGAGTTTTGTTGTTGCCCTCACTCCCAGCTGTGGGGCACATCTGTTTCTCCAGCTGGGAGTTGGCTTGTTGAAAGTTAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS-3UTR CAA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCCCAGCCTCCATCAGATaGTGCTCAAATTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: LTIRSSGCTIQPCNLICIPASIR*CSNSSR
Trigger: GCGGGAGGAATTTGAGCACAATCTGATGGAGGCTGG...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATATTTTCTCTCGAACTTaGGTTTCATACTCAGGCCTG +
Preference number: 5 (lower is better)
Translates to: QAQVWTFAPYYQVQRLHHIFSRT*VSYSGL
Trigger: CAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAAT...ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp AGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCCCAATCTCAAAGATGTaGTTCTGGATCAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: SGDKPRFGPLHLTIRSSGPISKM*FWINCF
Trigger: GAAGCAGTTGATCCAGAACAACATCTTTGAGATTGG...GCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGGGCTCATCCATCAGCTaGAGCTTCTCATGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKGSSIS*SFSCSS
Trigger: AGAGGAGCATGAGAAGCTCAAGCTGATGGATGAGCC...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CAA 90 bp TTTAGCTCCAAACGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCGGCTCATCCATCAGCTaGAGCTTCTCATGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: FSSKRFCDVKWRQAQVWTGSSIS*SFSCSS
Trigger: AGAGGAGCATGAGAAGCTCAAGCTGATGGATGAGCC...GGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS-3UTR CAA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACGAGACAAGCCCAGGTTaGGACCTTTGCACCTTACTA +
Preference number: 5 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYETSPG*DLCTLL
Trigger: TAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTC...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS GCA 90 bp CTTCCTTTGGACATTGTCATTTCTGGATGGGATGCCTGGAAAGACTaGAGCCAACTTCTGACCACAAGAGGAATCAGCCTGTCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: LPLDIVISGWDAWKD*SQLLTTRGISLSSL
Trigger: CAGAGAAGACAGGCTGATTCCTCTTGTGGTCAGAAGTTGGCTGCAGTCTTTCCAGGCATCCCATCCAGAAATGACAATGTCCAAAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS GCA 90 bp GGTGGAGACATGCCAACGTGTTGTCCAAACACATGCCCGAGTTCTTaGCTCTCTTGTATTCTACAAAAGCCTTCTGGGTCCAGAGAGAAT +
Preference number: 5 (lower is better)
Translates to: GGDMPTCCPNTCPSS*LSCILQKPSGSREN
Trigger: ATTCTCTCTGGACCCAGAAGGCTTTTGTAGAATACAAGAGAGGCAAGAACTCGGGCATGTGTTTGGACAACACGTTGGCATGTCTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541874.1
CDS GCA 90 bp TTAGGGTCGTTGGCTCAAGTGTGTAACAGATGTCCATTAAGTGGGTaGAGATGTTCTAAGTTTGAGGTAGGGTTGGGAGGGCAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: LGSLAQVCNRCPLSG*RCSKFEVGLGGQGS
Trigger: TGACCCTTGCCCTCCCAACCCTACCTCAAACTTAGAACATCTGCACCCACTTAATGGACATCTGTTACACACTTGAGCCAACGACCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541487.1
CDS CCA 90 bp GCCTTCGTTTCCCACAGCATCTCTAGCTCCAGTTCCCAAGAGGCCTaGTTATATTTCATTTCCTACACCCAGGAGCTTGTCTCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: AFVSHSISSSSSQEA*LYFISYTQELVSCF
Trigger: AAAGCAAGAGACAAGCTCCTGGGTGTAGGAAATGAAATATAACCAGGCCTCTTGGGAACTGGAGCTAGAGATGCTGTGGGAAACGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538154.5
CDS-3UTR CAA 90 bp CAGACAGACAGCACGCCATGTGGGTGTAGGAACATGCTTACGTGCATGTGCGTGTTCTTGGTAGGAACTTaGATCTTCAAGAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: QTDSTPCGCRNMLTCMCVFLVGT*IFKNSA
Trigger: GGCAGAATTCTTGAAGATCAAAGTTCCTACCAAGAA...CACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCACTGTCACCCGGACATaGGAGCGTGTAGCCTTATTG +
Preference number: 5 (lower is better)
Translates to: LTIRSSGCTIQPCNLICITVTRT*ERVALL
Trigger: CAATAAGGCTACACGCTCCAATGTCCGGGTGACAGT...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTTGAGCAAGAAAGCTTaGAGGATCAGGCGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGLSKKA*RIRRSS
Trigger: TGAAGAGCGCCTGATCCTCAAAGCTTTCTTGCTCAA...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGTTGAGCAAGAAAGCTTaGAGGATCAGGCGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWLSKKA*RIRRSS
Trigger: TGAAGAGCGCCTGATCCTCAAAGCTTTCTTGCTCAA...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS CCA 90 bp GGACAGCAGACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTTaGTTTCATACTCAGGCCTGGAATGTTCCTGGGCACGTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GQQTGCSPLAFSLEL*FHTQAWNVPGHVLL
Trigger: AAGAAGAACGTGCCCAGGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000650848.1
CDS-3UTR CAA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGTCCTTTTCCTGGATGTaGTACAGGTACATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWSFSWM*YRYIFS
Trigger: GGAGAAGATGTACCTGTACAACATCCAGGAAAAGGA...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp GAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTAGTGATAGTAAGTCACCCCAAAGACGATaGAGAATGTCAGGGCAATCA +
Preference number: 5 (lower is better)
Translates to: ETVAAPLQVTQFSCSDSKSPQRR*RMSGQS
Trigger: TGATTGCCCTGACATTCTCAATCGTCTTTGGGGTGA...CTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGACAGAGCGGCTGCAGTaGTTATTCGATACACTATCA +
Preference number: 5 (lower is better)
Translates to: LQLVKVRNDGEVQEGAPGTERLQ*LFDTLS
Trigger: TGATAGTGTATCGAATAACAACTGCAGCCGCTCTGT...CCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACACAGAGCGGCTGCAGTaGTTATTCGATACACTATCA +
Preference number: 5 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYTERLQ*LFDTLS
Trigger: TGATAGTGTATCGAATAACAACTGCAGCCGCTCTGT...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TTTGGACCTTTGCACCTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTCCAATCTCAAAGATGTaGTTCTGGATCAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: FGPLHLTIRSSGCTIQPCPISKM*FWINCF
Trigger: GAAGCAGTTGATCCAGAACAACATCTTTGAGATTGG...ACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS TCA 90 bp GGAGTGAGGGCAACAACAAAACTCCTTCCCTGCTCCATTATTCTCTaGGCTAAAATGGCGACCAATAAACATCAAAGTCAAGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GVRATTKLLPCSIIL*AKMATNKHQSQGWP
Trigger: TGGCCACCCTTGACTTTGATGTTTATTGGTCGCCATTTTAGCTCAGAGAATAATGGAGCAGGGAAGGAGTTTTGTTGTTGCCCTCACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS GCA 90 bp GAGATGCAAGATTCTTCCTTTGGACATTGTCATTTCTGGATGGGATaGCTGGAAAGACTGCAGCCAACTTCTGACCACAAGAGGAATCAG +
Preference number: 5 (lower is better)
Translates to: EMQDSSFGHCHFWMG*LERLQPTSDHKRNQ
Trigger: CTGATTCCTCTTGTGGTCAGAAGTTGGCTGCAGTCTTTCCAGGCATCCCATCCAGAAATGACAATGTCCAAAGGAAGAATCTTGCATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS CCA 90 bp TCATCATCCTCATCGCCACACTCCGTCGTGTTTGTTTCCAATTTCTaGACAGCAGACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACT +
Preference number: 5 (lower is better)
Translates to: SSSSSPHSVVFVSNF*TADWLLSFSIFSRT
Trigger: AGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCCAGAAATTGGAAACAAACACGACGGAGTGTGGCGATGAGGATGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000538154.5
ENST00000542326.5
ENST00000545860.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CCA 90 bp TCTTTCAGGAAGAAATCCACTAATAAGCTCTTCTCTTTCTTGATCTaGTCGCTGATGTCCGTGGGGATGTCTGGAATCATCCAGTCCACG +
Preference number: 5 (lower is better)
Translates to: SFRKKSTNKLFSFLI*SLMSVGMSGIIQST
Trigger: CGTGGACTGGATGATTCCAGACATCCCCACGGACATCAGCGACCAGATCAAGAAAGAGAAGAGCTTATTAGTGGATTTCTTCCTGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS CCA 90 bp GACAAGAGATGCAAGATTCTTCCTTTGGACATTGTCATTTCTGGATaGGATGCCTGGAAAGACTGCAGCCAACTTCTGACCACAAGAGGA +
Preference number: 5 (lower is better)
Translates to: DKRCKILPLDIVISG*DAWKDCSQLLTTRG
Trigger: TCCTCTTGTGGTCAGAAGTTGGCTGCAGTCTTTCCAGGCATCCCATCCAGAAATGACAATGTCCAAAGGAAGAATCTTGCATCTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS-3UTR CAA 90 bp TGGTCAAAGTCAGAAATGATGGTGAAGTACAAGAGGGTGCCCCAGGGTACATGGATTTTCTCTCGAACTTaGGTTTCATACTCAGGCCTG +
Preference number: 5 (lower is better)
Translates to: WSKSEMMVKYKRVPQGTWIFSRT*VSYSGL
Trigger: CAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAAT...CCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CGTTTTTGTGACGTGAAGTGGAGACAAGCCCAGGTTTGGACCTTTGCACCTTACCCAATCTCAAAGATGTaGTTCTGGATCAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: RFCDVKWRQAQVWTFAPYPISKM*FWINCF
Trigger: GAAGCAGTTGATCCAGAACAACATCTTTGAGATTGG...GTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp TTTGCATCTGCTGAGACTGTGGCAGCCCCACTGCAAGTGACTCAGTTTTCTTGTCCAATCTCAAAGATGTaGTTCTGGATCAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: FASAETVAAPLQVTQFSCPISKM*FWINCF
Trigger: GAAGCAGTTGATCCAGAACAACATCTTTGAGATTGG...ACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCACTTCAATGACGTTGTaGAGGAGGGCAAACACAGGT +
Preference number: 5 (lower is better)
Translates to: LTIRSSGCTIQPCNLICITSMTL*RRANTG
Trigger: ACCTGTGTTTGCCCTCCTCAACAACGTCATTGAAGT...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS TCA 90 bp TGCATATCCAACAGCCATTTCTCCTTTGACCCTCCTAAAAGAACCTaGCATTGTTCAGCTATCCACTTTCAGAGGGCTTACTCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: CISNSHFSFDPPKRT*HCSAIHFQRAYSSG
Trigger: CCCTGAAGAGTAAGCCCTCTGAAAGTGGATAGCTGAACAATGTCAGGTTCTTTTAGGAGGGTCAAAGGAGAAATGGCTGTTGGATATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS CCA 90 bp GTCCTTTTCCTGGATGTTGTACAGGTACATCTTCTCCCTGGAGAATaGGTAGGAGAGGTTTTTCATCTTGTTGTTGCTGTGTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VLFLDVVQVHLLPGE*VGEVFHLVVAVFWN
Trigger: GTTCCAGAACACAGCAACAACAAGATGAAAAACCTCTCCTACCCATTCTCCAGGGAGAAGATGTACCTGTACAACATCCAGGAAAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000544988.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CCA 90 bp TCTCCTTTAGCATTTTCTCTCGAACTTTGGTTTCATACTCAGGCCTaGAATGTTCCTGGGCACGTTCTTCTTCCTCTTCTATGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: SPLAFSLELWFHTQA*NVPGHVLLPLLCQS
Trigger: TGACTGGCATAGAAGAGGAAGAAGAACGTGCCCAGGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000650848.1
CDS CCA 90 bp TCGCCACACTCCGTCGTGTTTGTTTCCAATTTCTGGACAGCAGACTaGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTTGGTTTCATAC +
Preference number: 5 (lower is better)
Translates to: SPHSVVFVSNFWTAD*LLSFSIFSRTLVSY
Trigger: GTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCCAGAAATTGGAAACAAACACGACGGAGTGTGGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000538154.5
ENST00000540543.1
ENST00000542326.5
ENST00000545860.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CCA 90 bp GGACAGCAGACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTTaGTTTCATACTCAGGCCTGGAATGTTCTTCTTCCTCTTCTATGC +
Preference number: 5 (lower is better)
Translates to: GQQTGCSPLAFSLEL*FHTQAWNVLLPLLC
Trigger: GCATAGAAGAGGAAGAAGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538154.5
ENST00000540543.1
ENST00000545860.1
ENST00000682330.1
CDS CCA 90 bp GGACAGCAGACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTTaGTTTCATACTCAGGCCTGGAATGTTCCTGAGAACTCACTTCTT +
Preference number: 5 (lower is better)
Translates to: GQQTGCSPLAFSLEL*FHTQAWNVPENSLL
Trigger: AAGAAGTGAGTTCTCAGGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546188.5
CDS-3UTR CAA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAACCCAGGTTTGGACCTTaGCACCTTACTATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQPRFGP*HLTIRS
Trigger: GGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGG...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
CDS GCA 90 bp CTCTTCAGGGGAGACCATGGTTGTTTCTTCATTCTTGACAAGAGATaGAAGATTCTTCCTTTGGACATTGTCATTTCTGGATGGGATGCC +
Preference number: 5 (lower is better)
Translates to: LFRGDHGCFFILDKR*KILPLDIVISGWDA
Trigger: GGCATCCCATCCAGAAATGACAATGTCCAAAGGAAGAATCTTGCATCTCTTGTCAAGAATGAAGAAACAACCATGGTCTCCCCTGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS GCA 90 bp TGGCCTCATGGTTTCAAAGGGGCCAGATGCGGCTTTGGTACCATCTaGATATTCTCTGGTTGTTTTTCCATAACAAATGATGTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: WPHGFKGARCGFGTI*IFSGCFSITNDVSL
Trigger: TAGAGAGACATCATTTGTTATGGAAAAACAACCAGAGAATATGCAGATGGTACCAAAGCCGCATCTGGCCCCTTTGAAACCATGAGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541874.1
CDS GCA 90 bp TTAACCCGCTGCCTTCTTTATCTGAATAAGGAGGATGAGAAATGTTaGATGGCTGTTGTGAGAACTGCAGATGAAGTAGGTGAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: LTRCLLYLNKEDEKC*MAVVRTADEVGEVP
Trigger: AGGGACTTCACCTACTTCATCTGCAGTTCTCACAACAGCCATGCAACATTTCTCATCCTCCTTATTCAGATAAAGAAGGCAGCGGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541487.1
CDS-3UTR CAA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCCTGATAACAGAGAACTaGCCAATTCCAGAGAGAATG +
Preference number: 5 (lower is better)
Translates to: LTIRSSGCTIQPCNLICILITEN*PIPERM
Trigger: CATTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAG...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS CCA 90 bp CAACAACAAAACTCCTTCCCTGCTCCATTATTCTCTGAGCTAAAATaGCGACCAATAAACATCAAAGTCAAGGGTGGCCATAGGGAATCT +
Preference number: 5 (lower is better)
Translates to: QQQNSFPAPLFSELK*RPINIKVKGGHRES
Trigger: AGATTCCCTATGGCCACCCTTGACTTTGATGTTTATTGGTCGCCATTTTAGCTCAGAGAATAATGGAGCAGGGAAGGAGTTTTGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS-3UTR CAA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAATTGAGCAAGAAAGCTTaGAGGATCAGGCGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQLSKKA*RIRRSS
Trigger: TGAAGAGCGCCTGATCCTCAAAGCTTTCTTGCTCAA...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CTTACTATCAGGTCCAGCGGCTGCACCATTCAGCCTTGTAACTTAATTTGCATCTCGTACATCTCTTTCTaGGTAGGAACTTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: LTIRSSGCTIQPCNLICISYISF*VGTLIF
Trigger: GAAGATCAAAGTTCCTACCAAGAAAGAGATGTACGA...GATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAACTGATAACAGAGAACTaGCCAATTCCAGAGAGAATG +
Preference number: 5 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQLITEN*PIPERM
Trigger: CATTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAG...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS-3UTR CAA 90 bp CTGACTGCATTTCTCTTACAGCTGGTCAAAGTCAGAAATGATGGTGAAGTACAATTCTTGGTAGGAACTTaGATCTTCAAGAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: LTAFLLQLVKVRNDGEVQFLVGT*IFKNSA
Trigger: GGCAGAATTCTTGAAGATCAAAGTTCCTACCAAGAA...TTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS TCA 72 bp GGAGCAGGGGTATATCGCGCGGCCCGGGAGTCGCCATaGTGTGGACGCAGACCCCGCCGGCCCGCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: GAGVYRAARESP*CGRRPRRPAAA
Trigger: CGCGGCCGCGGGCCGGCGGGGTCTGCGTCCACATCATGGCGACTCCCGGGCCGCGCGATATACCCCTGCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546188.5
ENST00000682330.1
CDS CCA 72 bp AGGGGTATATCGCGCGGCCCGGGAGTCGCCATGATGTaGACGCAGACCCCGCCGGCCCGCGGCCGCGCGCTT +
Preference number: 6 (lower is better)
Translates to: RGISRGPGVAMM*TQTPPARGRAL
Trigger: AAGCGCGCGGCCGCGGGCCGGCGGGGTCTGCGTCCACATCATGGCGACTCCCGGGCCGCGCGATATACCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546188.5
ENST00000682330.1
CDS CAA 90 bp CTGCTGCGGGTGCTCTCTCCACCGCAGGGCTGGCCAGGATCTCTGTaGGAACCGCCCTGCAGACCTGGGGCCCGGGGACCTGGCATCTTG +
Preference number: 6 (lower is better)
Translates to: LLRVLSPPQGWPGSL*EPPCRPGARGPGIL
Trigger: CAAGATGCCAGGTCCCCGGGCCCCAGGTCTGCAGGGCGGTTCCAACAGAGATCCTGGCCAGCCCTGCGGTGGAGAGAGCACCCGCAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CCA 72 bp TGCTCTCTCCACCGCAGGGCTGGCCAGGATCTCTGTTaGAACCGCCCTGCAGACCTGGGGCCCGGGGACCTG +
Preference number: 6 (lower is better)
Translates to: CSLHRRAGQDLC*NRPADLGPGDL
Trigger: CAGGTCCCCGGGCCCCAGGTCTGCAGGGCGGTTCCAACAGAGATCCTGGCCAGCCCTGCGGTGGAGAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp TTTGGCCTGAAGGTGCTGAGCTGGCTGCCCGGCTCCTaGTTCGATCCCCACCTCCTGGGCTCCTCAGAGCCG +
Preference number: 6 (lower is better)
Translates to: FGLKVLSWLPGS*FDPHLLGSSEP
Trigger: CGGCTCTGAGGAGCCCAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCAGCTCAGCACCTTCAGGCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS CCA 72 bp TTGCCTGTCTCCCCATTGGAGACGATAGCCAGCGAGTaGCCAGGGAAGCCTTGGGCCAGGTGCACCCCGCGT +
Preference number: 6 (lower is better)
Translates to: LPVSPLETIASE*PGKPWARCTPR
Trigger: ACGCGGGGTGCACCTGGCCCAAGGCTTCCCTGGCCACTCGCTGGCTATCGTCTCCAATGGGGAGACAGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp CAGGGCAGTGGGGGAAACACGGAGACCAGGTCCTGGTaGCAGCTCTGCCACTTCTCATCTTTGGCACCTTGG +
Preference number: 6 (lower is better)
Translates to: QGSGGNTETRSW*QLCHFSSLAPW
Trigger: CCAAGGTGCCAAAGATGAGAAGTGGCAGAGCTGGCACCAGGACCTGGTCTCCGTGTTTCCCCCACTGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544988.1
CDS CAA 90 bp GACCAGGTCCTGGTGCCAGCTCTGCCACTTCTCATCTTTGGCACCTaGGCAACGTCACACCTGAGTCACCCCAGGGCTCTGCCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: DQVLVPALPLLIFGT*ATSHLSHPRALPSA
Trigger: AGCAGAAGGCAGAGCCCTGGGGTGACTCAGGTGTGACGTTGCCAAGGTGCCAAAGATGAGAAGTGGCAGAGCTGGCACCAGGACCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544988.1
CDS GCA 72 bp TCTGGAACTCGGGGCTGCAGGTGCGAGCTCAGCTTCTaGAGAGCCGCGCTGAACTTCTTTGCAATGCTGCCT +
Preference number: 6 (lower is better)
Translates to: SGTRGCRCELSF*RAALNFFAMLP
Trigger: AGGCAGCATTGCAAAGAAGTTCAGCGCGGCTCTGCAGAAGCTGAGCTCGCACCTGCAGCCCCGAGTTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000544988.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp GCATGTGCGTGTCTCTGCTGCCGTGCCCTCCTCTGCTaGAGGCTGAACTGCTCACACATTGGTGTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: ACACLCCRALLC*RLNCSHIGVLR
Trigger: TCTCAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000536751.1
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp GGGGGAAACACGGAGACCAGGTCCTGGTGCCAGCTCTaGCACTTCTCATCTTTGGCACCTTGGCAACGTCAC +
Preference number: 6 (lower is better)
Translates to: GGNTETRSWCQL*HFSSLAPWQRH
Trigger: GTGACGTTGCCAAGGTGCCAAAGATGAGAAGTGGCAGAGCTGGCACCAGGACCTGGTCTCCGTGTTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544988.1
CDS GCA 72 bp AGGAAGTCCACAGTGTTTCCTGCTCATCTGGATCCCTaGCCTTCCAGAGGTGCTTTCCCCCAGCCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: RKSTVFPAHLDP*PSRGAFPQPRA
Trigger: TGCCCTGGGCTGGGGGAAAGCACCTCTGGAAGGGCAGGGATCCAGATGAGCAGGAAACACTGTGGACTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544988.1
CDS CCA 72 bp CCAGGTCCTGGTGCCAGCTCTGCCACTTCTCATCTTTaGCACCTTGGCAACGTCACACCTGAGTCACCCCAG +
Preference number: 6 (lower is better)
Translates to: PGPGASSATSHL*HLGNVTPESPQ
Trigger: CTGGGGTGACTCAGGTGTGACGTTGCCAAGGTGCCAAAGATGAGAAGTGGCAGAGCTGGCACCAGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544988.1
CDS CAA 72 bp CTGGTGCCAGCTCTGCCACTTCTCATCTTTGGCACCTaGGCAACGTCACACCTGAGTCACCCCAGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LVPALPLLIFGT*ATSHLSHPRAL
Trigger: CAGAGCCCTGGGGTGACTCAGGTGTGACGTTGCCAAGGTGCCAAAGATGAGAAGTGGCAGAGCTGGCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544988.1
CDS TCA 72 bp CATGGCACCCTGGAAAGGGAGGGACATGACATTCCCTaGGGCCATCCCTACAGATCCACCCCACCTCTAGCA +
Preference number: 6 (lower is better)
Translates to: HGTLEREGHDIP*GHPYRSTPPLA
Trigger: TGCTAGAGGTGGGGTGGATCTGTAGGGATGGCCTCAGGGAATGTCATGTCCCTCCCTTTCCAGGGTGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538154.5
CDS GCA 72 bp TTCATCTTGTTGTTGCTGTGTTCTGGAACTCGGGGCTaGAGGTGCGAGCTCAGCTTCTGCAGAGCCGCGCTG +
Preference number: 6 (lower is better)
Translates to: FILLLLCSGTRG*RCELSFCRAAL
Trigger: CAGCGCGGCTCTGCAGAAGCTGAGCTCGCACCTGCAGCCCCGAGTTCCAGAACACAGCAACAACAAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000544988.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp CTCACACATTGGTGTGCTGAGAGCCTGACGACATCATaGTGCCCAGCTGGCTTTGGCCTGAAGGTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: LTHWCAESLTTS*CPAGFGLKVLS
Trigger: GCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCAGCACACCAATGTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp GTAGGAACATGCTTACGTGCATGTGCGTGTCTCTGCTaGCGTGCCCTCCTCTGCTGCAGGCTGAACTGCTCA +
Preference number: 6 (lower is better)
Translates to: VGTCLRACACLC*RALLCCRLNCS
Trigger: TGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp CAACTGCTGCTTCCAGAGGCTCCTGGGCATCTTGGGTaGTTGGGAGCTGCTTCACCAAGTCACACACTCTTC +
Preference number: 6 (lower is better)
Translates to: QLLLPEAPGHLG*LGAASPSHTLF
Trigger: GAAGAGTGTGTGACTTGGTGAAGCAGCTCCCAAGCACCCAAGATGCCCAGGAGCCTCTGGAAGCAGCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612575.1
CDS CCA 72 bp CCTCCTCACTCCTACTGCCCTATGTTCATGGCACCCTaGAAAGGGAGGGACATGACATTCCCTGAGGCCATC +
Preference number: 6 (lower is better)
Translates to: PPHSYCPMFMAP*KGRDMTFPEAI
Trigger: GATGGCCTCAGGGAATGTCATGTCCCTCCCTTTCCAGGGTGCCATGAACATAGGGCAGTAGGAGTGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538154.5
ENST00000540543.1
CDS GCA 72 bp TTGATCTTCAAGAATTCTGCCTCTCTGGCCAGCACCTaGCACGGGGCGTGTATCCGGACAAAGATGGATCCC +
Preference number: 6 (lower is better)
Translates to: LIFKNSASLAST*HGACIRTKMDP
Trigger: GGGATCCATCTTTGTCCGGATACACGCCCCGTGGCAGGTGCTGGCCAGAGAGGCAGAATTCTTGAAGATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000541487.1
ENST00000544988.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp AACTGGATGGCTGATACGAAGAGGGGCCCAGTGCTTTaGAGAGCAGTTTCACCAGAGGCAGAGGGATATCCC +
Preference number: 6 (lower is better)
Translates to: NWMADTKRGPVL*RAVSPEAEGYP
Trigger: GGGATATCCCTCTGCCTCTGGTGAAACTGCTCTGCAAAGCACTGGGCCCCTCTTCGTATCAGCCATCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS GCA 72 bp TCCAGGAACATGGTAGCGTCATCTCCATACTCGACTTaGGCACGTTGTCCCTCTCTCCTGTGCTATCCTCCA +
Preference number: 6 (lower is better)
Translates to: SRNMVASSPYST*ARCPSLLCYPP
Trigger: TGGAGGATAGCACAGGAGAGAGGGACAACGTGCGCAAGTCGAGTATGGAGATGACGCTACCATGTTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540543.1
CDS CCA 72 bp GGTTGGGAGGGCAAGGGTCAAATTCCAAGATCTTGGTaGCAGACTGCTAGCTGTCCCGACAGCTGTTCTCAT +
Preference number: 6 (lower is better)
Translates to: GWEGKGQIPRSW*QTASCPDSCSH
Trigger: ATGAGAACAGCTGTCGGGACAGCTAGCAGTCTGCCACCAAGATCTTGGAATTTGACCCTTGCCCTCCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541487.1
CDS CAA 72 bp TTCCAGGAACATGGTAGCGTCATCTCCATACTCGACTaGCGCACGTTGTCCCTCTCTCCTGTGCTATCCTCC +
Preference number: 6 (lower is better)
Translates to: FQEHGSVISILD*RTLSLSPVLSS
Trigger: GGAGGATAGCACAGGAGAGAGGGACAACGTGCGCAAGTCGAGTATGGAGATGACGCTACCATGTTCCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540543.1
CDS CAA 72 bp GTGGATGGAGTTGAGGGGTGGAGACATGCCAACGTGTaGTCCAAACACATGCCCGAGTTCTTGCCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: VDGVEGWRHANV*SKHMPEFLPLL
Trigger: CAAGAGAGGCAAGAACTCGGGCATGTGTTTGGACAACACGTTGGCATGTCTCCACCCCTCAACTCCATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541874.1
CDS TCA 72 bp CTTAAACCTGCAGAACTGAACCTCCTGGTCAAACTGTaGGTTTTCTGGCTGCGTCCCCTCCTTCAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: LKPAELNLLVKL*VFWLRPLLQLA
Trigger: AGCCAGCTGAAGGAGGGGACGCAGCCAGAAAACTCACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp GTCCCAACTAAGGTATCGTCATCTCCATACTCGACTTaGGCACGTTGTCCCTCTCTCCTGTGCTATCCTCCA +
Preference number: 6 (lower is better)
Translates to: VPTKVSSSPYST*ARCPSLLCYPP
Trigger: TGGAGGATAGCACAGGAGAGAGGGACAACGTGCGCAAGTCGAGTATGGAGATGACGATACCTTAGTTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538154.5
CDS CCA 72 bp TGCGCTTCAGGATCTCGTGCACAATGCGGCTGCGGGTaGCATTATCAAAGAAGGTGTCCTTTTCCTGGATGT +
Preference number: 6 (lower is better)
Translates to: CASGSRAQCGCG*HYQRRCPFPGC
Trigger: ACATCCAGGAAAAGGACACCTTCTTTGATAATGCCACCCGCAGCCGCATTGTGCACGAGATCCTGAAGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CCA 72 bp TTTCTTGATCTGGTCGCTGATGTCCGTGGGGATGTCTaGAATCATCCAGTCCACGAGGACGCTCAGGAACAT +
Preference number: 6 (lower is better)
Translates to: FLDLVADVRGDV*NHPVHEDAQEH
Trigger: ATGTTCCTGAGCGTCCTCGTGGACTGGATGATTCCAGACATCCCCACGGACATCAGCGACCAGATCAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000612575.1
ENST00000650848.1
ENST00000682330.1
CDS CAA 72 bp AACTTCTTTGCATCGAGCCGCACTTCAATGACGTTGTaGAGGAGGGCAAACACAGGTGCCAGGGGAAAGGAG +
Preference number: 6 (lower is better)
Translates to: NFFASSRTSMTL*RRANTGARGKE
Trigger: CTCCTTTCCCCTGGCACCTGTGTTTGCCCTCCTCAACAACGTCATTGAAGTGCGGCTCGATGCAAAGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CAA 90 bp GCTGTTGCTGTCACTGTCACCCGGACATTGGAGCGTGTAGCCTTATaGAGAGACAGAGCGGCTGCAGTTGTTATTCGATACACTATCACC +
Preference number: 6 (lower is better)
Translates to: AVAVTVTRTLERVAL*RDRAAAVVIRYTIT
Trigger: GGTGATAGTGTATCGAATAACAACTGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTCCAATGTCCGGGTGACAGTGACAGCAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000545860.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp AGCATCCGGCCGTCTCAGCTCTGTAACAAACTTCTTTaGATCGAGCCGCACTTCAATGACGTTGTTGAGGAG +
Preference number: 6 (lower is better)
Translates to: SIRPSQLCNKLL*IEPHFNDVVEE
Trigger: CTCCTCAACAACGTCATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACAGAGCTGAGACGGCCGGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CCA 72 bp TGCAGAGCAGTTTCACCAGAGGCAGAGGGATATCCCTaGTCATCCCACCAACTATCGTCAGACCTCAAACTT +
Preference number: 6 (lower is better)
Translates to: CRAVSPEAEGYP*SSHQLSSDLKL
Trigger: AAGTTTGAGGTCTGACGATAGTTGGTGGGATGACCAGGGATATCCCTCTGCCTCTGGTGAAACTGCTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS CAA 72 bp GTCACTGTCACCCGGACATTGGAGCGTGTAGCCTTATaGAGAGACAGAGCGGCTGCAGTTGTTATTCGATAC +
Preference number: 6 (lower is better)
Translates to: VTVTRTLERVAL*RDRAAAVVIRY
Trigger: GTATCGAATAACAACTGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTCCAATGTCCGGGTGACAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000545860.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CAA 72 bp ACAAACTTCTTTGCATCGAGCCGCACTTCAATGACGTaGTTGAGGAGGGCAAACACAGGTGCCAGGGGAAAG +
Preference number: 6 (lower is better)
Translates to: TNFFASSRTSMT*LRRANTGARGK
Trigger: CTTTCCCCTGGCACCTGTGTTTGCCCTCCTCAACAACGTCATTGAAGTGCGGCTCGATGCAAAGAAGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CAA 90 bp GGGTGGAGACATGCCAACGTGTTGTCCAAACACATGCCCGAGTTCTaGCCTCTCTTGTATTCTACAAAAGCCTTCTGGGTCCAGAGAGAA +
Preference number: 6 (lower is better)
Translates to: GWRHANVLSKHMPEF*PLLYSTKAFWVQRE
Trigger: TTCTCTCTGGACCCAGAAGGCTTTTGTAGAATACAAGAGAGGCAAGAACTCGGGCATGTGTTTGGACAACACGTTGGCATGTCTCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541874.1
CDS CAA 90 bp TGTTATGGGGTGGATGGAGTTGAGGGGTGGAGACATGCCAACGTGTaGTCCAAACACATGCCCGAGTTCTTGCCTCTCTTGTATTCTACA +
Preference number: 6 (lower is better)
Translates to: CYGVDGVEGWRHANV*SKHMPEFLPLLYST
Trigger: TGTAGAATACAAGAGAGGCAAGAACTCGGGCATGTGTTTGGACAACACGTTGGCATGTCTCCACCCCTCAACTCCATCCACCCCATAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541874.1
CDS CAA 90 bp TGGACAGCAGACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTaGGTTTCATACTCAGGCCTGGAATGTTCCTGGGCACGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: WTADWLLSFSIFSRT*VSYSGLECSWARSW
Trigger: CCAGGAACGTGCCCAGGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS CCA 72 bp TCCCACAGCATCTCTAGCTCCAGTTCCCAAGAGGCCTaGTTATATTTCATTTCCTACACCCAGGAGCTTGTC +
Preference number: 6 (lower is better)
Translates to: SHSISSSSSQEA*LYFISYTQELV
Trigger: GACAAGCTCCTGGGTGTAGGAAATGAAATATAACCAGGCCTCTTGGGAACTGGAGCTAGAGATGCTGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538154.5
CDS CCA 72 bp CCGGTGTTGAGAAAAAGAGAGGAAATGTTAACTGGATaGCTGATACGAAGAGGGGCCCAGTGCTTTGCAGAG +
Preference number: 6 (lower is better)
Translates to: PVLRKREEMLTG*LIRRGAQCFAE
Trigger: CTCTGCAAAGCACTGGGCCCCTCTTCGTATCAGCCATCCAGTTAACATTTCCTCTCTTTTTCTCAACACCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS CAA 72 bp GCTGGCCTCATGGTTTCAAAGGGGCCAGATGCGGCTTaGGTACCATCTGCATATTCTCTGGTTGTTTTTCCA +
Preference number: 6 (lower is better)
Translates to: AGLMVSKGPDAA*VPSAYSLVVFP
Trigger: TGGAAAAACAACCAGAGAATATGCAGATGGTACCAAAGCCGCATCTGGCCCCTTTGAAACCATGAGGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541874.1
CDS CAA 90 bp CATGCCAACGTGTTGTCCAAACACATGCCCGAGTTCTTGCCTCTCTaGTATTCTACAAAAGCCTTCTGGGTCCAGAGAGAATGGGCTAAG +
Preference number: 6 (lower is better)
Translates to: HANVLSKHMPEFLPL*YSTKAFWVQREWAK
Trigger: CTTAGCCCATTCTCTCTGGACCCAGAAGGCTTTTGTAGAATACAAGAGAGGCAAGAACTCGGGCATGTGTTTGGACAACACGTTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541874.1
CDS CAA 90 bp AGATGTCCATTAAGTGGGTGCAGATGTTCTAAGTTTGAGGTAGGGTaGGGAGGGCAAGGGTCAAATTCCAAGATCTTGGTGGCAGACTGC +
Preference number: 6 (lower is better)
Translates to: RCPLSGCRCSKFEVG*GGQGSNSKILVADC
Trigger: GCAGTCTGCCACCAAGATCTTGGAATTTGACCCTTGCCCTCCCAACCCTACCTCAAACTTAGAACATCTGCACCCACTTAATGGACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541487.1
CDS GCA 72 bp ATGCCAACGTGTTGTCCAAACACATGCCCGAGTTCTTaGCTCTCTTGTATTCTACAAAAGCCTTCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: MPTCCPNTCPSS*LSCILQKPSGS
Trigger: GGACCCAGAAGGCTTTTGTAGAATACAAGAGAGGCAAGAACTCGGGCATGTGTTTGGACAACACGTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541874.1
CDS CAA 72 bp CATGCCAACGTGTTGTCCAAACACATGCCCGAGTTCTaGCCTCTCTTGTATTCTACAAAAGCCTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: HANVLSKHMPEF*PLLYSTKAFWV
Trigger: GACCCAGAAGGCTTTTGTAGAATACAAGAGAGGCAAGAACTCGGGCATGTGTTTGGACAACACGTTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541874.1
CDS CAA 90 bp TGGACAGCAGACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTaGGTTTCATACTCAGGCCTGGAATGTTCCTGGGCACGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: WTADWLLSFSIFSRT*VSYSGLECSWARSS
Trigger: AGAAGAACGTGCCCAGGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000650848.1
CDS CAA 90 bp AGGTCAGTTTATCTTCATCATCCTCATCGCCACACTCCGTCGTGTTaGTTTCCAATTTCTGGACAGCAGACTGGTTGCTCTCCTTTAGCA +
Preference number: 6 (lower is better)
Translates to: RSVYLHHPHRHTPSC*FPISGQQTGCSPLA
Trigger: TGCTAAAGGAGAGCAACCAGTCTGCTGTCCAGAAATTGGAAACAAACACGACGGAGTGTGGCGATGAGGATGATGAAGATAAACTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000538154.5
ENST00000542326.5
ENST00000545860.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp ATTGGAGCGTGTAGCCTTATTGAGAGACAGAGCGGCTaGAGTTGTTATTCGATACACTATCACCCCAAAGAC +
Preference number: 6 (lower is better)
Translates to: IGACSLIERQSG*SCYSIHYHPKD
Trigger: GTCTTTGGGGTGATAGTGTATCGAATAACAACTGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000545860.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS GCA 72 bp GATTCTTCCTTTGGACATTGTCATTTCTGGATGGGATaGCTGGAAAGACTGCAGCCAACTTCTGACCACAAG +
Preference number: 6 (lower is better)
Translates to: DSSFGHCHFWMG*LERLQPTSDHK
Trigger: CTTGTGGTCAGAAGTTGGCTGCAGTCTTTCCAGGCATCCCATCCAGAAATGACAATGTCCAAAGGAAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS CCA 72 bp ACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTTaGTTTCATACTCAGGCCTGGAATGTTCCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: TGCSPLAFSLEL*FHTQAWNVPGH
Trigger: GTGCCCAGGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000542326.5
ENST00000650848.1
CDS CCA 72 bp TCATCGCCACACTCCGTCGTGTTTGTTTCCAATTTCTaGACAGCAGACTGGTTGCTCTCCTTTAGCATTTTC +
Preference number: 6 (lower is better)
Translates to: SSPHSVVFVSNF*TADWLLSFSIF
Trigger: GAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCCAGAAATTGGAAACAAACACGACGGAGTGTGGCGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000538154.5
ENST00000540543.1
ENST00000542326.5
ENST00000545860.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CAA 72 bp GACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTaGGTTTCATACTCAGGCCTGGAATGTTCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: DWLLSFSIFSRT*VSYSGLECSWA
Trigger: TGCCCAGGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000542326.5
ENST00000650848.1
CDS CAA 72 bp TATCTTCATCATCCTCATCGCCACACTCCGTCGTGTTaGTTTCCAATTTCTGGACAGCAGACTGGTTGCTCT +
Preference number: 6 (lower is better)
Translates to: YLHHPHRHTPSC*FPISGQQTGCS
Trigger: AGAGCAACCAGTCTGCTGTCCAGAAATTGGAAACAAACACGACGGAGTGTGGCGATGAGGATGATGAAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000538154.5
ENST00000542326.5
ENST00000545860.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CAA 72 bp GTGTTGTCCAAACACATGCCCGAGTTCTTGCCTCTCTaGTATTCTACAAAAGCCTTCTGGGTCCAGAGAGAA +
Preference number: 6 (lower is better)
Translates to: VLSKHMPEFLPL*YSTKAFWVQRE
Trigger: TTCTCTCTGGACCCAGAAGGCTTTTGTAGAATACAAGAGAGGCAAGAACTCGGGCATGTGTTTGGACAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541874.1
CDS CAA 72 bp TTAAGTGGGTGCAGATGTTCTAAGTTTGAGGTAGGGTaGGGAGGGCAAGGGTCAAATTCCAAGATCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LSGCRCSKFEVG*GGQGSNSKILV
Trigger: CACCAAGATCTTGGAATTTGACCCTTGCCCTCCCAACCCTACCTCAAACTTAGAACATCTGCACCCACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541487.1
CDS CCA 72 bp CTGGATGTTGTACAGGTACATCTTCTCCCTGGAGAATaGGTAGGAGAGGTTTTTCATCTTGTTGTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: LDVVQVHLLPGE*VGEVFHLVVAV
Trigger: CACAGCAACAACAAGATGAAAAACCTCTCCTACCCATTCTCCAGGGAGAAGATGTACCTGTACAACATCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000544988.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CCA 72 bp GCATTTTCTCTCGAACTTTGGTTTCATACTCAGGCCTaGAATGTTCCTGGGCACGTTCTTCTTCCTCTTCTA +
Preference number: 6 (lower is better)
Translates to: AFSLELWFHTQA*NVPGHVLLPLL
Trigger: TAGAAGAGGAAGAAGAACGTGCCCAGGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000650848.1
CDS CCA 72 bp GAGATGCAAGATTCTTCCTTTGGACATTGTCATTTCTaGATGGGATGCCTGGAAAGACTGCAGCCAACTTCT +
Preference number: 6 (lower is better)
Translates to: EMQDSSFGHCHF*MGCLERLQPTS
Trigger: AGAAGTTGGCTGCAGTCTTTCCAGGCATCCCATCCAGAAATGACAATGTCCAAAGGAAGAATCTTGCATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS CAA 72 bp GCTTTGATCTCGTACATCTCTTTCTTGGTAGGAACTTaGATCTTCAAGAATTCTGCCTCTCTGGCCAGCACC +
Preference number: 6 (lower is better)
Translates to: ALISYISFLVGT*IFKNSASLAST
Trigger: GGTGCTGGCCAGAGAGGCAGAATTCTTGAAGATCAAAGTTCCTACCAAGAAAGAGATGTACGAGATCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
CDS CAA 90 bp TGGACAGCAGACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTaGGTTTCATACTCAGGCCTGGAATGTTCTTCTTCCTCTTCTATG +
Preference number: 6 (lower is better)
Translates to: WTADWLLSFSIFSRT*VSYSGLECSSSSSM
Trigger: CATAGAAGAGGAAGAAGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538154.5
ENST00000540543.1
ENST00000545860.1
ENST00000682330.1
CDS TCA 72 bp AACAGCCATTTCTCCTTTGACCCTCCTAAAAGAACCTaGCATTGTTCAGCTATCCACTTTCAGAGGGCTTAC +
Preference number: 6 (lower is better)
Translates to: NSHFSFDPPKRT*HCSAIHFQRAY
Trigger: GTAAGCCCTCTGAAAGTGGATAGCTGAACAATGTCAGGTTCTTTTAGGAGGGTCAAAGGAGAAATGGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS TCA 72 bp TGGCCATCCAGCATTAAGACCACATCTCCCTTGCAATaGGGTGTTTCCATAAACAGTATTTCTGGCCAATGT +
Preference number: 6 (lower is better)
Translates to: WPSSIKTTSPLQ*GVSINSISGQC
Trigger: ACATTGGCCAGAAATACTGTTTATGGAAACACCTCATTGCAAGGGAGATGTGGTCTTAATGCTGGATGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541487.1
CDS CCA 72 bp CCTTTTCCTGGATGTTGTACAGGTACATCTTCTCCCTaGAGAATGGGTAGGAGAGGTTTTTCATCTTGTTGT +
Preference number: 6 (lower is better)
Translates to: PFPGCCTGTSSP*RMGRRGFSSCC
Trigger: ACAACAAGATGAAAAACCTCTCCTACCCATTCTCCAGGGAGAAGATGTACCTGTACAACATCCAGGAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000544988.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CCA 72 bp TCCGTCGTGTTTGTTTCCAATTTCTGGACAGCAGACTaGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTTG +
Preference number: 6 (lower is better)
Translates to: SVVFVSNFWTAD*LLSFSIFSRTL
Trigger: CAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTCTGCTGTCCAGAAATTGGAAACAAACACGACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000538154.5
ENST00000540543.1
ENST00000542326.5
ENST00000545860.1
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CCA 72 bp AACTCCTTCCCTGCTCCATTATTCTCTGAGCTAAAATaGCGACCAATAAACATCAAAGTCAAGGGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: NSFPAPLFSELK*RPINIKVKGGH
Trigger: ATGGCCACCCTTGACTTTGATGTTTATTGGTCGCCATTTTAGCTCAGAGAATAATGGAGCAGGGAAGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS CCA 72 bp ACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTTaGTTTCATACTCAGGCCTGGAATGTTCCTGAGAAC +
Preference number: 6 (lower is better)
Translates to: TGCSPLAFSLEL*FHTQAWNVPEN
Trigger: GTTCTCAGGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546188.5
CDS CAA 72 bp GACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTaGGTTTCATACTCAGGCCTGGAATGTTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: DWLLSFSIFSRT*VSYSGLECSSS
Trigger: GGAAGAAGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538154.5
ENST00000540543.1
ENST00000545860.1
ENST00000682330.1
CDS CAA 90 bp CATGGTTGTTTCTTCATTCTTGACAAGAGATGCAAGATTCTTCCTTaGGACATTGTCATTTCTGGATGGGATGCCTGGAAAGACTGCAGC +
Preference number: 6 (lower is better)
Translates to: HGCFFILDKRCKILP*DIVISGWDAWKDCS
Trigger: GCTGCAGTCTTTCCAGGCATCCCATCCAGAAATGACAATGTCCAAAGGAAGAATCTTGCATCTCTTGTCAAGAATGAAGAAACAACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS CAA 90 bp CAGAGGGCTTACTCTTCAGGGGAGACCATGGTTGTTTCTTCATTCTaGACAAGAGATGCAAGATTCTTCCTTTGGACATTGTCATTTCTG +
Preference number: 6 (lower is better)
Translates to: QRAYSSGETMVVSSF*TRDARFFLWTLSFL
Trigger: CAGAAATGACAATGTCCAAAGGAAGAATCTTGCATCTCTTGTCAAGAATGAAGAAACAACCATGGTCTCCCCTGAAGAGTAAGCCCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS CCA 72 bp ACTGGTTGCTCTCCTTTAGCATTTTCTCTCGAACTTTaGTTTCATACTCAGGCCTGGAATGTTCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: TGCSPLAFSLEL*FHTQAWNVLLP
Trigger: AGGAAGAAGAACATTCCAGGCCTGAGTATGAAACCAAAGTTCGAGAGAAAATGCTAAAGGAGAGCAACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538154.5
ENST00000540543.1
ENST00000545860.1
ENST00000682330.1
CDS GCA 72 bp TGCCTTCTTTATCTGAATAAGGAGGATGAGAAATGTTaGATGGCTGTTGTGAGAACTGCAGATGAAGTAGGT +
Preference number: 6 (lower is better)
Translates to: CLLYLNKEDEKC*MAVVRTADEVG
Trigger: ACCTACTTCATCTGCAGTTCTCACAACAGCCATGCAACATTTCTCATCCTCCTTATTCAGATAAAGAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541487.1
CDS CAA 72 bp TACTCTTCAGGGGAGACCATGGTTGTTTCTTCATTCTaGACAAGAGATGCAAGATTCTTCCTTTGGACATTG +
Preference number: 6 (lower is better)
Translates to: YSSGETMVVSSF*TRDARFFLWTL
Trigger: CAATGTCCAAAGGAAGAATCTTGCATCTCTTGTCAAGAATGAAGAAACAACCATGGTCTCCCCTGAAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS TCA 72 bp GCAACAACAAAACTCCTTCCCTGCTCCATTATTCTCTaGGCTAAAATGGCGACCAATAAACATCAAAGTCAA +
Preference number: 6 (lower is better)
Translates to: ATTKLLPCSIIL*AKMATNKHQSQ
Trigger: TTGACTTTGATGTTTATTGGTCGCCATTTTAGCTCAGAGAATAATGGAGCAGGGAAGGAGTTTTGTTGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542326.5
CDS CAA 72 bp GGTCACACATCTCTCTGCTGGGAATATCTTCTTCAATaGTTGCACATCCATAAAGAAACACAATCACTCCAA +
Preference number: 6 (lower is better)
Translates to: GHTSLCWEYLLQ*LHIHKETQSLQ
Trigger: TTGGAGTGATTGTGTTTCTTTATGGATGTGCAACAATTGAAGAAGATATTCCCAGCAGAGAGATGTGTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CAA 90 bp TGTAAGCAAAGTTTATTTAATGCATATCCAACAGCCATTTCTCCTTaGACCCTCCTAAAAGAACCTGACATTGTTCAGCTATCCACTTTC +
Preference number: 6 (lower is better)
Translates to: CKQSLFNAYPTAISP*TLLKEPDIVQLSTF
Trigger: GAAAGTGGATAGCTGAACAATGTCAGGTTCTTTTAGGAGGGTCAAAGGAGAAATGGCTGTTGGATATGCATTAAATAAACTTTGCTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536751.1
CDS TCA 72 bp AAAGAAACACAATCACTCCAATTACAGAAGATGGGATaGGGAATGATGTATATAATCCCAGCCAGGCAAAAT +
Preference number: 6 (lower is better)
Translates to: KETQSLQLQKMG*GMMYIIPARQN
Trigger: ATTTTGCCTGGCTGGGATTATATACATCATTCCTCATCCCATCTTCTGTAATTGGAGTGATTGTGTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327087.12
ENST00000356134.9
ENST00000546188.5
ENST00000650848.1
ENST00000682330.1
CDS CAA 72 bp AGTTTATTTAATGCATATCCAACAGCCATTTCTCCTTaGACCCTCCTAAAAGAACCTGACATTGTTCAGCTA +
Preference number: 6 (lower is better)
Translates to: SLFNAYPTAISP*TLLKEPDIVQL
Trigger: TAGCTGAACAATGTCAGGTTCTTTTAGGAGGGTCAAAGGAGAAATGGCTGTTGGATATGCATTAAATAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536751.1