RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131620

Ensembl transcript IDs: ENST00000316296.9, ENST00000355303.9, ENST00000525494.1, ENST00000529636.5, ENST00000529913.1, ENST00000530480.5, ENST00000530676.5, ENST00000531300.1, ENST00000531349.5, ENST00000531604.5

Found 543 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTaGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCA +
Preference number: 1 (lower is better)
Translates to: PRTHRALVGAGSRLP*ERVPIGQDARLACP
Trigger: TGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR CCA 90 bp ACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTaGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCA +
Preference number: 1 (lower is better)
Translates to: TVTFRALVGAGSRLP*ERVPIGQDARLACP
Trigger: TGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
3UTR CCA 90 bp TGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCCTGGTaGGAGCGGGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTC +
Preference number: 1 (lower is better)
Translates to: WSSMFAENPGPTGPW*EREAACPGRGCPSV
Trigger: GACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR GCA 90 bp AAAGAAGAAAGGAAAATGTCCTATCAGAAAGTGGTCCTCCATGTTTaGAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGC +
Preference number: 1 (lower is better)
Translates to: KEERKMSYQKVVLHV*RKPRTHRALVGAGS
Trigger: GCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATTTTCCTTTCTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR TCA 90 bp CCTGTGTGGCTCAGGGATGAGGCACTTCTCTCTCAGCCACTCAACTaGTGGAAGGAAAAGGCGATGGAAAGTCTAACTTTTCTGAAACAG +
Preference number: 1 (lower is better)
Translates to: PVWLRDEALLSQPLN*WKEKAMESLTFLKQ
Trigger: CTGTTTCAGAAAAGTTAGACTTTCCATCGCCTTTTCCTTCCATCAGTTGAGTGGCTGAGAGAGAAGTGCCTCATCCCTGAGCCACACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR GCA 90 bp AACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTaGCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAA +
Preference number: 1 (lower is better)
Translates to: NPDTICGNASEVISL*PFSGQPVLSHKEDE
Trigger: TTCATCTTCCTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR GCA 90 bp TCACTTTTCACCTCTAGGGAGACTCAAGTTTCCAAGCATTCTTTCTaGAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCA +
Preference number: 1 (lower is better)
Translates to: SLFTSRETQVSKHSF*KAPAFATLLPYYQP
Trigger: TGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAATGCTTGGAAACTTGAGTCTCCCTAGAGGTGAAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGGCCCATCGGTCAGGATaGCCGGCTGGCCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: PTVTFRALVGAGSRLPWEAHRSG*PAGLPS
Trigger: GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGC...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
3UTR-3UTR GCA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTAGCCCATCGGTCAGGATaGCCGGCTGGCCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLAHRSG*PAGLPS
Trigger: GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGC...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCGCCCATCGGTCAGGATaGCCGGCTGGCCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRAAHRSG*PAGLPS
Trigger: GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGC...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR CCA 90 bp TTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCAGTCAGGATGCCCGGCTaGCCTGCCCAGCCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: FPEASHQLLRDASAYHFAVRMPG*PAQPRW
Trigger: CCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGAC...TGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR TCA 90 bp TCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGGGGCAGGTGTGTGGCTaGCAGTGGGGAGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: SEVISLCPFSGQPVLSHKGQVCG*QWGACW
Trigger: CCAGCAGGCTCCCCACTGTCAGCCACACACCTGCCC...CTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTGCCCTGGGAGAGGGTaGCCATCGGTCAGGATGCCC +
Preference number: 2 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHCPGRG*PSVRMP
Trigger: GGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCA...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR CCA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGAAGCCGCCTGCCCTaGGAGAGGGTGCCCATCGGT +
Preference number: 2 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTGSRLP*ERVPIG
Trigger: ACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR CCA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCCAGTGGGGAGCCTGCTaGGGACGCCAAGGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTQWGAC*GRQGCC
Trigger: ACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTG...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR CCA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCACTTTCCAGGGATAACTaGGATGCTCCCACGCCCCCT +
Preference number: 2 (lower is better)
Translates to: KASRGPLEALRLLETLTPLSRDN*DAPTPP
Trigger: AGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR TCA 90 bp TTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGGTTTTCCATTTTCCCTaGAGCATCGCACCAGCTTTT +
Preference number: 2 (lower is better)
Translates to: FPGITGMLPRPLCGSGMRVFHFP*SIAPAF
Trigger: AAAAGCTGGTGCGATGCTTCAGGGAAAATGGAAAAC...CCTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATCATCGCACCAGCTTTTaGGCGATGCCTCGGCTTACC +
Preference number: 2 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHHRTSF*AMPRLT
Trigger: GGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATG...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR CAA 90 bp GAAAGAAGAAAGGAAAATGTCCTATCAGAAAGTGGTCCTCCATGTTaGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAG +
Preference number: 2 (lower is better)
Translates to: ERRKENVLSESGPPC*QKTQDPPGPGGSGK
Trigger: CTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATTTTCCTTTCTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGAGCGGGAAGCCGCCTaGCCTGGGAGAGGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQREREAA*PGRGCP
Trigger: TGGGCACCCTCTCCCAGGGCAGGCGGCTTCCCGCTC...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
3UTR-3UTR GCA 90 bp CTTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGCCTTTGCTACCTTATTaGCGTATTACCAGCCATCAT +
Preference number: 2 (lower is better)
Translates to: LSRDNWDAPTPPVWLRDEPLLPY*RITSHH
Trigger: ATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGG...CTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCACCAGCTTTTGCGCGATaGCTCGGCTTACCATTTTGC +
Preference number: 2 (lower is better)
Translates to: KASRGPLEALRLLETLTPPAFAR*LGLPFC
Trigger: GCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGG...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR CCA 90 bp TCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGACTCTGAGGTCGGCTTaGTGTGATGGGGGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: SEVISLCPFSGQPVLSHKTLRSA*CDGGRC
Trigger: ACACCTGCCCCCATCACACCAAGCCGACCTCAGAGT...CTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGATGCCCTGGGAGAGGGTaGCCATCGGTCAGGATGCCC +
Preference number: 2 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRCPGRG*PSVRMP
Trigger: GGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCA...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
3UTR-3UTR GCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTGAGCGGGAAGCCGCCTaGCCTGGGAGAGGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVEREAA*PGRGCP
Trigger: TGGGCACCCTCTCCCAGGGCAGGCGGCTTCCCGCTC...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
3UTR-3UTR GCA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCGTTTCTACGGGCCTCTaGTCACTTTTCACCTCTAGG +
Preference number: 2 (lower is better)
Translates to: EASHQLLRDASAYHFASIVSTGL*SLFTSR
Trigger: CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAAC...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCAAAGGGTGCTGTTTCCTaGTTAATCAGGGACACCTCT +
Preference number: 2 (lower is better)
Translates to: KASRGPLEALRLLETLTPKGAVS*LIRDTS
Trigger: AGAGGTGTCCCTGATTAAGCAGGAAACAGCACCCTT...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR TCA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGAAGATGAACAACTCTaGGGTCGGCTTGGTGTGATG +
Preference number: 2 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTEDEQL*GRLGVM
Trigger: CATCACACCAAGCCGACCTCAGAGTTGTTCATCTTC...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp TTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGCTCGGCTTACCATTTTaGATCTATCTTAAGGAATTA +
Preference number: 2 (lower is better)
Translates to: FPGITGMLPRPLCGSGMRLGLPF*IYLKEL
Trigger: TAATTCCTTAAGATAGATGCAAAATGGTAAGCCGAG...CCTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATAAGGGTGCTGTTTCCTaGTTAATCAGGGACACCTCT +
Preference number: 2 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHKGAVS*LIRDTS
Trigger: AGAGGTGTCCCTGATTAAGCAGGAAACAGCACCCTT...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR CCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTGGAAGCCGCCTGCCCTaGGAGAGGGTGCCCATCGGT +
Preference number: 2 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVGSRLP*ERVPIG
Trigger: ACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
3UTR-3UTR GCA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGCAAAGCACCTaGCTTTGCTACCTTATTGCC +
Preference number: 2 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHFLQST*LCYLIA
Trigger: GGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAA...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCTTTCTGCAAAGCACCTaGCTTTGCTACCTTATTGCC +
Preference number: 2 (lower is better)
Translates to: EASHQLLRDASAYHFASIFLQST*LCYLIA
Trigger: GGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAA...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR CCA 90 bp AGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTGCTCACTTTTCACCTCTAGGTGTCCTATCAGAAAGTaGTCCTCCATGTTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: RRIQRRVSTGLCSLFTSRCPIRK*SSMFAE
Trigger: TTCTGCAAACATGGAGGACCACTTTCTGATAGGACA...CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR CCA 90 bp TCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGGTAGGTGACACCTTTTaGAACCGGAATCAATCATTA +
Preference number: 2 (lower is better)
Translates to: SEVISLCPFSGQPVLSHKVGDTF*NRNQSL
Trigger: TAATGATTGATTCCGGTTCCAAAAGGTGTCACCTAC...CTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR TCA 90 bp TACAAAACCCACTTCAAACTACTTACTGTACAAGAGAAAAGAGAAGCATCAGATTGTGTGGCTCAGGGATaGGGCACTTCTCTCTCAGCC +
Preference number: 2 (lower is better)
Translates to: YKTHFKLLTVQEKREASDCVAQG*GTSLSA
Trigger: GGCTGAGAGAGAAGTGCCTCATCCCTGAGCCACACA...ATCTGATGCTTCTCTTTTCTCTTGTACAGTAAGTAGTTTGAAGTGGGTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355303.9
3UTR-3UTR CCA 90 bp TACAAAACCCACTTCAAACTACTTACTGTACAAGAGAAAAGAGAAGCATCAGATACTCTGAGGTCGGCTTaGTGTGATGGGGGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: YKTHFKLLTVQEKREASDTLRSA*CDGGRC
Trigger: ACACCTGCCCCCATCACACCAAGCCGACCTCAGAGT...ATCTGATGCTTCTCTTTTCTCTTGTACAGTAAGTAGTTTGAAGTGGGTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355303.9
3UTR-3UTR TCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTGACTTCTTGAAACCCTaGCACCATCTGTGGAAATGC +
Preference number: 2 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVDFLKP*HHLWKC
Trigger: GCATTTCCACAGATGGTGTCAGGGTTTCAAGAAGTC...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR GCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTCACCATCTGTGGAAATaGTTCCGAGGTCATCTCTCT +
Preference number: 2 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVHHLWK*FRGHLS
Trigger: AGAGAGATGACCTCGGAAGCATTTCCACAGATGGTG...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR CCA 72 bp CACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTaGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTG +
Preference number: 3 (lower is better)
Translates to: HRALVGAGSRLP*ERVPIGQDARL
Trigger: CAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR CCA 72 bp TTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTaGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTG +
Preference number: 3 (lower is better)
Translates to: FRALVGAGSRLP*ERVPIGQDARL
Trigger: CAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
3UTR CCA 72 bp TCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTaGCTCAGGGATGAGGCACTTCTCTCTCAGCCACTC +
Preference number: 3 (lower is better)
Translates to: SRDNWDAPTPPV*LRDEALLSQPL
Trigger: GAGTGGCTGAGAGAGAAGTGCCTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR CAA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTAGCAAAGCACCTGCCTTaGCTACCTTATTGCCGTATT +
Preference number: 3 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLAKHLP*LPYCRI
Trigger: AATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGC...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR TCA 72 bp AGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTaGAACCCTGACACCATCTGTGGAAATGCTTCCGAG +
Preference number: 3 (lower is better)
Translates to: SFQGTPGSPKTS*NPDTICGNASE
Trigger: CTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR GCA 72 bp AGGAAAATGTCCTATCAGAAAGTGGTCCTCCATGTTTaGAGAAAACCCAGGACCCACCGGGCCCTGGTGGGA +
Preference number: 3 (lower is better)
Translates to: RKMSYQKVVLHV*RKPRTHRALVG
Trigger: TCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR-3UTR CAA 90 bp AGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTGCTCACTTTTCACCTCTAGGCCCTGCATAATGGCTTaGTGCAAAAACAAGGGAAAG +
Preference number: 3 (lower is better)
Translates to: RRIQRRVSTGLCSLFTSRPCIMA*CKNKGK
Trigger: CTTTCCCTTGTTTTTGCACAAAGCCATTATGCAGGG...CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR GCA 72 bp ATTAGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTaGTCACTTTTCACCTCTAGGGAGACTCAAGTTTCC +
Preference number: 3 (lower is better)
Translates to: IRRIQRRVSTGL*SLFTSRETQVS
Trigger: GGAAACTTGAGTCTCCCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR GCA 72 bp GCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTaGATCTATCTTAAGGAATTAGGAGGATTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: APAFARCLGLPF*IYLKELGGFRG
Trigger: TCCTCTGAATCCTCCTAATTCCTTAAGATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR TCA 72 bp CTCTACAGCGACTTTATCCTTCTAGGTGATTCTATATaGACACACCAGATAAGATTAAAGCCCACCCCACCA +
Preference number: 3 (lower is better)
Translates to: LYSDFILLGDSI*THQIRLKPTPP
Trigger: TGGTGGGGTGGGCTTTAATCTTATCTGGTGTGTTCATATAGAATCACCTAGAAGGATAAAGTCGCTGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316296.9
3UTR CCA 72 bp AGTCTAACTTTTCTGAAACAGGTAGGTGACACCTTTTaGAACCGGAATCAATCATTATTCTTGCGTGGGTTT +
Preference number: 3 (lower is better)
Translates to: SLTFLKQVGDTF*NRNQSLFLRGF
Trigger: AAACCCACGCAAGAATAATGATTGATTCCGGTTCCAAAAGGTGTCACCTACCTGTTTCAGAAAAGTTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR TCA 72 bp CTTTCATTAACTCTACAGCGACTTTATCCTTCTAGGTaGTTCTATATGAACACACCAGATAAGATTAAAGCC +
Preference number: 3 (lower is better)
Translates to: LSLTLQRLYPSR*FYMNTPDKIKA
Trigger: GGCTTTAATCTTATCTGGTGTGTTCATATAGAATCACCTAGAAGGATAAAGTCGCTGTAGAGTTAATGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316296.9
CDS-3UTR GCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCGGCTGGGGGCTGGGCTaGCGAGGCTGTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRGWGLG*RGCLGR
Trigger: CCTGCCCAGACAGCCTCGGCAGCCCAGCCCCCAGCC...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCGTCAGGATGCCCGGCTaGCCTGCCCAGCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGVRMPG*PAQPRW
Trigger: CCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGAC...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCGGGGGTGGTCCTGCTTaGCGCTGCGAGCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRGGGPA*RCEPQR
Trigger: CCTCTGGGGCTCGCAGCGTCAAGCAGGACCACCCCC...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCGTCAGGATGCCCGGCTaGCCTGCCCAGCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAVRMPG*PAQPRW
Trigger: CCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGAC...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCGGGCTCCCCCGAGCCTaGATCCAGCGACGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSGLPRA*IQRRPL
Trigger: AAGGGGGCGTCGCTGGATGCAGGCTCGGGGGAGCCC...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGGAGCGGGAAGCCGCCTaGCCTGGGAGAGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQEREAA*PGRGCP
Trigger: TGGGCACCCTCTCCCAGGGCAGGCGGCTTCCCGCTC...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCCGTGGTAGGCATGGCTaGGGGCTGGGCTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLARGRHG*GLGCRG
Trigger: GCCTCGGCAGCCCAGCCCCCAGCCATGCCTACCACG...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATAGTCAGGATGCCCGGCTaGCCTGCCCAGCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGIVRMPG*PAQPRW
Trigger: CCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGAC...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCGAGGGGGTGTCGCTGTaGTGCACCCTCCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPREGVSL*CTLLTR
Trigger: CCTGGTCAGGAGGGTGCAGCACAGCGACACCCCCTC...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCAAACGCCAGCCGGGCTaGCAGGACGGCCCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGKRQPG*QDGPEV
Trigger: GACTTCTGGGCCGTCCTGGCAGCCCGGCTGGCGTTT...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCTGCCCTGGGAGAGGGTaGCCATCGGTCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGCPGRG*PSVRMP
Trigger: GGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCA...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTTGCCCGGCAGGGGGTaGTCCTGCTTGACGCTGCGA +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRLPGRG*SCLTLR
Trigger: TCGCAGCGTCAAGCAGGACCACCCCCTGCCGGGCAA...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGGCTGGCGCGGGCCGTaGCGCAGGCTGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPGWRGP*RRLSSS
Trigger: AGATGAGCTCAGCCTGCGCCACGGCCCGCGCCAGCC...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTCGTGGTAGGCATGGCTaGGGGCTGGGCTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPRGRHG*GLGCRG
Trigger: GCCTCGGCAGCCCAGCCCCCAGCCATGCCTACCACG...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCGGAAGCCGCCTGCCCTaGGAGAGGGTGCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAGSRLP*ERVPIG
Trigger: ACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCGGAAGCCGCCTGCCCTaGGAGAGGGTGCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSGSRLP*ERVPIG
Trigger: ACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGGCCCCGCTGTGCTGGTaGCCTTCAGGAGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQAPLCW*PSGGPG
Trigger: TCCAGGTCCTCCTGAAGGTCACCAGCACAGCGGGGC...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCTGCGCCGGCCGTCCCTaGAGTACAGGCCATACTTGC +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGCAGRP*STGHTC
Trigger: GCAAGTATGGCCTGTACTTCAGGGACGGCCGGCGCA...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR TCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCGCTTCCAGTGCTCCATaGAGGTGGCAGCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRASSAP*RWQPRG
Trigger: CCCTCTGGGCTGCCACCTTCATGGAGCACTGGAAGC...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCGGGGTGTCGCTGTGCTaGACCCTCCTGACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAGVSLC*TLLTRV
Trigger: GACCCTGGTCAGGAGGGTGCAGCACAGCGACACCCC...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATAGGCAGGGGGTGGTCCTaGTTGACGCTGCGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGIGRGWS*LTLRAP
Trigger: TGGGGCTCGCAGCGTCAAGCAGGACCACCCCCTGCC...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCAGGGGGAGGAGTTCATaGCCAAGGCGGCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSRGRSS*PRRRPW
Trigger: CCATGGCCGCCGCCTTGGCCATGAACTCCTCCCCCT...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCAGCAGCGCAAACAGTaGGGCCAGGGGGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQQQRKQ*GQGEGG
Trigger: GCCTCCTTCCCCCTGGCCCCACTGTTTGCGCTGCTG...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCCAGTGGGGAGCCTGCTaGGGACGCCAAGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAQWGAC*GRQGCC
Trigger: ACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTG...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCGCTTCCAGTGCTCCATaGAGGTGGCAGCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSASSAP*RWQPRG
Trigger: CCCTCTGGGCTGCCACCTTCATGGAGCACTGGAAGC...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCGGTTCTGGAAGACGATaGCAAACGCCAGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGGSGRR*QTPAGL
Trigger: CAGCCCGGCTGGCGTTTGTCATCGTCTTCCAGAACC...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATGGTCTGGGGCCTGTaGTCAGCCACTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGMVWGL*SATLGW
Trigger: CCAGCCCAAAGTGGCTGAGCACAGGCCCCAGACCAT...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTAAACGCCAGCCGGGCTaGCAGGACGGCCCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPKRQPG*QDGPEV
Trigger: GACTTCTGGGCCGTCCTGGCAGCCCGGCTGGCGTTT...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGGGCGGCTCGTCCTTCTaGCGCTCCTTCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQGGSSF*RSFSIQ
Trigger: CTGGATGGAGAAGGAGCGGCAGAAGGACGAGCCGCC...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTTGCCCTGGGAGAGGGTaGCCATCGGTCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPCPGRG*PSVRMP
Trigger: GGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCA...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATATTGCCCGGCAGGGGGTaGTCCTGCTTGACGCTGCGA +
Preference number: 4 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGILPGRG*SCLTLR
Trigger: TCGCAGCGTCAAGCAGGACCACCCCCTGCCGGGCAA...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCGCTTTGGTGTTGTGGTaGTTGCACGGCGGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRALVLW*LHGGSS
Trigger: GGACGAGCCGCCGTGCAACCACCACAACACCAAAGC...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCACGCCCCCTGTGTaGCTCAGGGATGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSPTPPV*LRDEAL
Trigger: AAGTGCCTCATCCCTGAGCCACACAGGGGGCGTGGG...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCTTGGGGCCATGTCCCTaGCACCTTGGCCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSLGPCP*HLGLSG
Trigger: GCCAGAGAGGCCAAGGTGCCAGGGACATGGCCCCAA...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp AACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGCATTCCGGGCCCTGGTaGGAGCGGGAAGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: NSDIPGPGGSGKPPALGEHSGPW*EREAAC
Trigger: GCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATG...CTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGGCCGTGGCGCAGGCTaGGCTCATCTTCCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPGRGAG*AHLPVA
Trigger: AGCTACTGGAAGATGAGCTCAGCCTGCGCCACGGCC...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGGGACCTCGATCTTGGTaGGCCATCGGGCTATGCAGC +
Preference number: 4 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQGPRSW*AIGLCS
Trigger: GCTGCATAGCCCGATGGCTCACCAAGATCGAGGTCC...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCCGATGTCTTTGGCTCTaGCAGCTACCGGCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGRCLWL*QLPAFG
Trigger: TCCGAAGGCCGGTAGCTGTCAGAGCCAAAGACATCG...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGGGGATGTCCGGGATaGCCCAGTCCACAAAGTCGC +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAWGCPG*PSPQSR
Trigger: GCGACTTTGTGGACTGGGTCATCCCGGACATCCCCA...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGCCCATCGGTCAGGATaGCCGGCTGGCCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALAHRSG*PAGLPS
Trigger: GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGC...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGTGCCCTGGGAGAGGGTaGCCATCGGTCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: PTVTFRALVGAGSRLPWECPGRG*PSVRMP
Trigger: GGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCA...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCGTCTCCATCGTGCAGTaGGTATGCAGCCGCGTACAC +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGVSIVQ*VCSRVH
Trigger: GTGTACGCGGCTGCATACCCACTGCACGATGGAGAC...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCGTCTCCATCGTGCAGTaGGTATGCAGCCGCGTACAC +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRVSIVQ*VCSRVH
Trigger: GTGTACGCGGCTGCATACCCACTGCACGATGGAGAC...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCGCAGGGATGAGCATCTaGGTGTACACGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAAGMSI*VYTPSQ
Trigger: CTGGCTGGGCGTGTACACCCAGATGCTCATCCCTGC...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp TGTTTGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGGCTGGCGCGGGCCGTaGCGCAGGCTGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: CLQKTQDPPGPGGSGKPPGWRGP*RRLSSS
Trigger: AGATGAGCTCAGCCTGCGCCACGGCCCGCGCCAGCC...AGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGTGTCGAAGAGGTGGCTaGCGCGGGCCGTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALCRRGG*RGPWRR
Trigger: CCTGCGCCACGGCCCGCGCCAGCCACCTCTTCGACA...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGGTTGTCGAAGAGGTaGCTGGCGCGGGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALGLSKR*LARAVA
Trigger: CGCCACGGCCCGCGCCAGCCACCTCTTCGACAACCC...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCGGGGCCGTGCCGTTCTaGAAGTCACTGACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRGAVPF*KSLTLK
Trigger: CTTCAACGTCAGTGACTTCCAGAACGGCACGGCCCC...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCGCTTTGGTGTTGTGGTaGTTGCACGGCGGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAALVLW*LHGGSS
Trigger: GGACGAGCCGCCGTGCAACCACCACAACACCAAAGC...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCCTTTCCAGGGATAACTaGGATGCTCCCACGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRLSRDN*DAPTPP
Trigger: AGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCCTTTCCAGGGATAACTaGGATGCTCCCACGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGLSRDN*DAPTPP
Trigger: AGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGGTTAGGGGACAGTTaGGGCCATGTCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAWLGDS*GHVPGT
Trigger: GGTGCCAGGGACATGGCCCCAACTGTCCCCTAACCA...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTCGAGTACTTCTCGTTaGCCCTCATCGTGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLASSTSR*PSSWPP
Trigger: AGGCGGCCACGATGAGGGTCAACGAGAAGTACTCGA...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR TCA 90 bp TGTTTGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGGGCAGGTGTGTGGCTaGCAGTGGGGAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLQKTQDPPGPGGSGKPPGQVCG*QWGACW
Trigger: CCAGCAGGCTCCCCACTGTCAGCCACACACCTGCCC...AGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGAAACTCGGCCTCTCTaGACAGCACGTTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPETRPL*TARSRG
Trigger: CCCCCTGGAACGTGCTGTGCAGAGAGGCCGAGTTTC...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCATCGCACCAGCTTTTaGGCGATGCCTCGGCTTACC +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSHRTSF*AMPRLT
Trigger: GGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATG...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCTCCTGGAAACAGCATTaGTCACCACCTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSSWKQH*SPPGRA
Trigger: GGCCCTCCCAGGTGGTGAGCAATGCTGTTTCCAGGA...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCAGTCTCTTCATGGTCTaGGGCCTGTGCTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRSLFMV*GLCSAT
Trigger: AGTGGCTGAGCACAGGCCCCAGACCATGAAGAGACT...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCGGGGCCGTGCCGTTCTaGAAGTCACTGACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAGAVPF*KSLTLK
Trigger: CTTCAACGTCAGTGACTTCCAGAACGGCACGGCCCC...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATAGCTTTGGTGTTGTGGTaGTTGCACGGCGGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGIALVLW*LHGGSS
Trigger: GGACGAGCCGCCGTGCAACCACCACAACACCAAAGC...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCTGCCGAGGCTGTCTaGGCAGGCTTTGGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPAAEAV*AGFGVV
Trigger: CACAACACCAAAGCCTGCCCAGACAGCCTCGGCAGC...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGCCACCTGGGAGGGCCTaGTCAGCATCTGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALPPGRA*SASGAG
Trigger: GCCGGCACCAGATGCTGACCAGGCCCTCCCAGGTGG...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATAGCATTGCTCACCACCTaGGAGGGCCTGGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGIALLTT*EGLVSI
Trigger: GATGCTGACCAGGCCCTCCCAGGTGGTGAGCAATGC...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCCAAAATACTTCCTaGCCAGGTCGATGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSPQNTS*PGRWAG
Trigger: ACCAGCCCATCGACCTGGTCAGGAAGTATTTTGGGG...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGCCATGTACTCTGGGGTaGGGCCCGCGAAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALPCTLG*GPRRAP
Trigger: TGGAGCCCTTCGCGGGCCTCACCCCAGAGTACATGG...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATACTGGTCAGCATCTGGTaGCGGCAGGAGGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGILVSIW*RQEAET
Trigger: AGTTTCAGCCTCCTGCCGGCACCAGATGCTGACCAG...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGTTGACGAAGCCGTaGATGGTCCCGTTCTTACTG +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRWLTKP*MVPFLL
Trigger: CAGTAAGAACGGGACCATGCACGGCTTCGTCAACCA...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCAGCTGCTGCTTGTCTTaGTCCTCCCGCATGAACAGC +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLASCCLS*SSRMNS
Trigger: GCTGTTCATGCGGGAGGAGCAAGACAAGCAGCAGCT...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCTGGGGACGCCAAGGGTaGTGTTTCCTGCTTAATCAG +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGWGRQG*CFLLNQ
Trigger: CTGATTAAGCAGGAAACAGCACCCTTGGCGTCCCCA...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGCATCAGGCAGCCCCCTaGCGCACACTCTTCCATTCG +
Preference number: 4 (lower is better)
Translates to: PTVTFRALVGAGSRLPWEHQAAP*RTLFHS
Trigger: CGAATGGAAGAGTGTGCGCCAGGGGGCTGCCTGATG...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGCAGGCTTTGGTGTTGTaGTGGTTGCACGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: PTVTFRALVGAGSRLPWEQALVL*WLHGGS
Trigger: CGAGCCGCCGTGCAACCACCACAACACCAAAGCCTG...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCAAAGCGGGCACATGGTaGTATTGTGTCTCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRKAGTW*YCVSGH
Trigger: GTGACCAGAGACACAATATCACCATGTGCCCGCTTT...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGCCGTGGCGCAGGCTaGGCTCATCTTCCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALGRGAG*AHLPVA
Trigger: AGCTACTGGAAGATGAGCTCAGCCTGCGCCACGGCC...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCGCTTCAGGTAGCGGATaGGCTTCTTCATCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAASGSG*ASSSSG
Trigger: TCCCGAAGATGAAGAAGCTCATCCGCTACCTGAAGC...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTCCAGGCGGATCTCGATaGTGTTGTTCAGCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPPGGSR*CCSAAQ
Trigger: TTGCGCTGCTGAACAACATCATCGAGATCCGCCTGG...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGTGGTGTTGTGGTGGTTaGACGGCGGCTCGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PTVTFRALVGAGSRLPWEWCCGG*TAARPS
Trigger: AGAAGGACGAGCCGCCGTGCAACCACCACAACACCA...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp TTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGGCCCATCGGTCAGGATaGCCGGCTGGCCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FPGITGMLPRPLCGSGMRAHRSG*PAGLPS
Trigger: GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGC...CCTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCGAGGTCATCTCTCTCTaGCCATTTTCTGGTCAACCG +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPREVISL*PFSGQP
Trigger: CGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTC...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGCCCATGCTGTACTTaGCCTTTGTACACGTCGTTC +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRCPCCT*PLYTSF
Trigger: GAACGACGTGTACAAAGGCCAAGTACAGCATGGGCA...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCGGATGTTTTCATCCATaGTGGCGCATCCGTACAGGA +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGGCFHP*WRIRTG
Trigger: TCCTGTACGGATGCGCCACCATGGATGAAAACATCC...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp CTTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGGCTGGCGCGGGCCGTaGCGCAGGCTGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: LSRDNWDAPTPPVWLRDEGWRGP*RRLSSS
Trigger: AGATGAGCTCAGCCTGCGCCACGGCCCGCGCCAGCC...CTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGGGTTGTCGAAGAGGTaGCTGGCGCGGGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: LSRDNWDAPTPPVWLRDEGLSKR*LARAVA
Trigger: CGCCACGGCCCGCGCCAGCCACCTCTTCGACAACCC...CTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGGGGTTGTCGAAGAGGTaGCTGGCGCGGGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: FPGITGMLPRPLCGSGMRGLSKR*LARAVA
Trigger: CGCCACGGCCCGCGCCAGCCACCTCTTCGACAACCC...CCTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCCTAGGATGCCTCTCCTaGAAACAGCATTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRLGCLS*KQHCSP
Trigger: TGGTGAGCAATGCTGTTTCCAGGAGAGGCATCCTAG...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCGGAGTTTTCTGTCGTTaGACTCGACGTTTTCACCGT +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRGVFCR*TRRFHR
Trigger: ACGGTGAAAACGTCGAGTTCAACGACAGAAAACTCC...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTCGTACAGGAAGACAATaGTTCCCACGATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPRTGRQ*FPRWRQ
Trigger: CTGCCTCCATCGTGGGAATCATTGTCTTCCTGTACG...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCAAAGCGGGCACATGGTaGTATTGTGTCTCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSKAGTW*YCVSGH
Trigger: GTGACCAGAGACACAATATCACCATGTGCCCGCTTT...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp AACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGGGTCCCAGCGGTAGTTaGGTCGCATCTGTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: NSDIPGPGGSGKPPALGEGPSGS*VASVSA
Trigger: AGCGGAAACAGATGCGACTCAACTACCGCTGGGACC...CTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTATTCAGCTCTAGGATaGTCCTTGACAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRYSALG*SLTASS
Trigger: AGAGGAGGCTGTCAAGGATCATCCTAGAGCTGAATA...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTACCATGTACTCTGGGGTaGGGCCCGCGAAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLPCTLG*GPRRAP
Trigger: TGGAGCCCTTCGCGGGCCTCACCCCAGAGTACATGG...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCTTCGGAGCTCAGTaGCAAACTTTTTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPAFGAQ*QTFWRP
Trigger: TGGACGCCAAAAAGTTTGTCACTGAGCTCCGAAGGC...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATAGCCTTCGGAGCTCAGTaGCAAACTTTTTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGIAFGAQ*QTFWRP
Trigger: TGGACGCCAAAAAGTTTGTCACTGAGCTCCGAAGGC...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp AACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGCGATGTCTTTGGCTCTaGCAGCTACCGGCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: NSDIPGPGGSGKPPALGERCLWL*QLPAFG
Trigger: TCCGAAGGCCGGTAGCTGTCAGAGCCAAAGACATCG...CTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCGAAGATGAACAACTCTaGGGTCGGCTTGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAEDEQL*GRLGVM
Trigger: CATCACACCAAGCCGACCTCAGAGTTGTTCATCTTC...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp TGTTTGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGAAACTCGGCCTCTCTaGACAGCACGTTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: CLQKTQDPPGPGGSGKPPETRPL*TARSRG
Trigger: CCCCCTGGAACGTGCTGTGCAGAGAGGCCGAGTTTC...AGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR GCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCAAGTCAAATAGATGCTaGTTCTCCCGGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRKSNRC*FSREKG
Trigger: TCCCTTCTCCCGGGAGAAGCAGCATCTATTTGACTT...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCGAAAACTCCATAGCGTaGCCACTCTTCGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSENSIA*PLFVQE
Trigger: CTCCTGTACGAAGAGTGGGCACGCTATGGAGTTTTC...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTCATCTTCCAGTAGCTaGAGGTCTTGTCGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLASSSSS*RSCRKA
Trigger: CGCTTTGCGACAAGACCTGCAGCTACTGGAAGATGA...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGTGTTTCCGCTTCCAGTaGTCCATGAAGGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PTVTFRALVGAGSRLPWECFRFQ*SMKVAA
Trigger: GGCTGCCACCTTCATGGAGCACTGGAAGCGGAAACA...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTCCAGCTTTTGCGCGATaGCTCGGCTTACCATTTTGC +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPPAFAR*LGLPFC
Trigger: GCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGG...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCGAGGTCATCTCTCTCTaGCCATTTTCTGGTCAACCG +
Preference number: 4 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSEVISL*PFSGQP
Trigger: CGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTC...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTTCTCTGGCCCTAGGATaGCTCTCCTGGAAACAGCAT +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPSLALG*LSWKQH
Trigger: ATGCTGTTTCCAGGAGAGGCATCCTAGGGCCAGAGA...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCACAAACCCGACTCCGTaGATTTTAGTGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLATNPTP*ILVSSS
Trigger: GGACGAGGACACTAAAATCCACGGAGTCGGGTTTGT...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CCA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGACGTTCCAGGGGGCATaGATTTTCACAAACCCGACT +
Preference number: 4 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQTFQGA*IFTNPT
Trigger: AGTCGGGTTTGTGAAAATCCATGCCCCCTGGAACGT...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTCGAACAGGTTGTTCTaGATCAGCTGTTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLASNRLF*ISCFPS
Trigger: GCTGGGGAAACAGCTGATCCAGAACAACCTGTTCGA...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCCGGCCCAGAAGTCCTTaGAGATGTCGTACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGRPRSP*RCRTCF
Trigger: AAAACAAGTACGACATCTCCAAGGACTTCTGGGCCG...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTAGCACCTTCTCCTTGTaGATCTGCTGGCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPSTFSL*ICWLMS
Trigger: GGACATCAGCCAGCAGATCCACAAGGAGAAGGTGCT...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTATGCGCCGGCCGTCCCTaGAGTACAGGCCATACTTGC +
Preference number: 4 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLCAGRP*STGHTC
Trigger: GCAAGTATGGCCTGTACTTCAGGGACGGCCGGCGCA...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR TCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCCAACAAACCGGCCTTTaGAGAACGCCACGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAQQTGL*RTPRKR
Trigger: TCTTTTACGTGGCGTTCTTCAAAGGCCGGTTTGTTG...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp AACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGCCAGGCGGATCTCGATaGTGTTGTTCAGCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: NSDIPGPGGSGKPPALGEPGGSR*CCSAAQ
Trigger: TTGCGCTGCTGAACAACATCATCGAGATCCGCCTGG...CTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCGCTTCCCAATGCCTCTaGGGATATTGTACCAGATTC +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLAASQCL*GYCTRF
Trigger: GAATCTGGTACAATATCCTCAGAGGCATTGGGAAGC...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp TGTTTGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTTGTGGATCTGCTGGCTaGTGTCCTTGGGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: CLQKTQDPPGPGGSGKPPCGSAG*CPWGCP
Trigger: CGGACATCCCCAAGGACATCAGCCAGCAGATCCACA...AGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATATCTCAGCCACTCAACTaGTGGAAGGAAAAGGCGATG +
Preference number: 4 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGISQPLN*WKEKAM
Trigger: CATCGCCTTTTCCTTCCATCAGTTGAGTGGCTGAGA...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGCCTCGTACTCCTCCCTaGGGAAGCGCTTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALPRTPP*GSACHP
Trigger: AGGATGACAAGCGCTTCCGCAGGGAGGAGTACGAGG...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGAAGTCAAATAGATGCTaGTTCTCCCGGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQKSNRC*FSREKG
Trigger: TCCCTTCTCCCGGGAGAAGCAGCATCTATTTGACTT...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGGACAAGTCAAATAGATaGTGCTTCTCCCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQDKSNR*CFSREK
Trigger: CTTCTCCCGGGAGAAGCAGCATCTATTTGACTTGTC...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGTCGTGCTCCGGGTTTTaGTGTCGAAAAAGGAATCCT +
Preference number: 4 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQSCSGF*CRKRNP
Trigger: AGGATTCCTTTTTCGACAGCAAAACCCGGAGCACGA...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp TGTTTGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTTGGTGTTGTGGTGGTTaGACGGCGGCTCGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CLQKTQDPPGPGGSGKPPWCCGG*TAARPS
Trigger: AGAAGGACGAGCCGCCGTGCAACCACCACAACACCA...AGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGAAGGGTGCTGTTTCCTaGTTAATCAGGGACACCTCT +
Preference number: 4 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQKGAVS*LIRDTS
Trigger: AGAGGTGTCCCTGATTAAGCAGGAAACAGCACCCTT...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCGTGATATTGTGTCTCTaGTCACACATCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRVILCL*SHISML
Trigger: CAGCATGGAGATGTGTGACCAGAGACACAATATCAC...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp TTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGAGGGGGAGGAGTTCATaGCCAAGGCGGCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: FPGITGMLPRPLCGSGMRRGRSS*PRRRPW
Trigger: CCATGGCCGCCGCCTTGGCCATGAACTCCTCCCCCT...CCTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCAACATGACCAGGTTCTaGAAGACGATGACAAACGCC +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLANMTRF*KTMTNA
Trigger: GGCGTTTGTCATCGTCTTCCAGAACCTGGTCATGTT...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp AACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGAGTACAGGCCATACTTaGACTCGGCATCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: NSDIPGPGGSGKPPALGESTGHT*TRHQGP
Trigger: TGGACCCTGATGCCGAGTGCAAGTATGGCCTGTACT...CTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp TGTTTGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTTGTTTCCGCTTCCAGTaGTCCATGAAGGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CLQKTQDPPGPGGSGKPPCFRFQ*SMKVAA
Trigger: GGCTGCCACCTTCATGGAGCACTGGAAGCGGAAACA...AGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp AGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTGCTCACTTTTCACCTCTAGGGGCTGGGGGCTGGGCTaGCGAGGCTGTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRIQRRVSTGLCSLFTSRGWGLG*RGCLGR
Trigger: CCTGCCCAGACAGCCTCGGCAGCCCAGCCCCCAGCC...CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTCACACATCTCCATGCTaGGGATGTTTTCATCCATGG +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPHTSPC*GCFHPW
Trigger: CCATGGATGAAAACATCCCCAGCATGGAGATGTGTG...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGGTGATATTGTGTCTCTaGTCACACATCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQVILCL*SHISML
Trigger: CAGCATGGAGATGTGTGACCAGAGACACAATATCAC...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGGCTTTTCTCCGTCTTTaGGACCTCGATCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PTVTFRALVGAGSRLPWEAFLRL*DLDLGE
Trigger: CTCACCAAGATCGAGGTCCCAAAGACGGAGAAAAGC...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCACGCCACGTAAAAGATaGGGGTGTAGGAATTCACAA +
Preference number: 4 (lower is better)
Translates to: GSRLPWERVPIGQDARLATPRKR*GCRNSQ
Trigger: TTGTGAATTCCTACACCCCCATCTTTTACGTGGCGT...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTACATCAGGCAGCCCCCTaGCGCACACTCTTCCATTCG +
Preference number: 4 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLHQAAP*RTLFHS
Trigger: CGAATGGAAGAGTGTGCGCCAGGGGGCTGCCTGATG...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCGTGACGAAGCCAAACTaGATGATCATTTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGVTKPN*MIISMY
Trigger: GTACATGGAAATGATCATCCAGTTTGGCTTCGTCAC...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATAAACATGACCAGGTTCTaGAAGACGATGACAAACGCC +
Preference number: 4 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGINMTRF*KTMTNA
Trigger: GGCGTTTGTCATCGTCTTCCAGAACCTGGTCATGTT...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp TGTTTGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTTGTCTGGGCAGGCTTTaGTGTTGTGGTGGTTGCACG +
Preference number: 4 (lower is better)
Translates to: CLQKTQDPPGPGGSGKPPCLGRL*CCGGCT
Trigger: CGTGCAACCACCACAACACCAAAGCCTGCCCAGACA...AGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGTGTCTGGGCAGGCTTTaGTGTTGTGGTGGTTGCACG +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALCLGRL*CCGGCT
Trigger: CGTGCAACCACCACAACACCAAAGCCTGCCCAGACA...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCCTGAAACTAAGCAACTaGCTTCTCTCTACAGTAACA +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGLKLSN*LLSTVT
Trigger: TGTTACTGTAGAGAGAAGTCAGTTGCTTAGTTTCAG...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCGGGCAGGTGTGTGGCTaGCAGTGGGGAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRAGQVCG*QWGACW
Trigger: CCAGCAGGCTCCCCACTGTCAGCCACACACCTGCCC...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGGACAAGTCAAATAGATaGTGCTTCTCCCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PTVTFRALVGAGSRLPWEDKSNR*CFSREK
Trigger: CTTCTCCCGGGAGAAGCAGCATCTATTTGACTTGTC...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTTTTCTGCAAAGCACCTaGCTTTGCTACCTTATTGCC +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPFLQST*LCYLIA
Trigger: GGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAA...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGGCAGGGATGAGCATCTaGGTGTACACGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FPGITGMLPRPLCGSGMRAGMSI*VYTPSQ
Trigger: CTGGCTGGGCGTGTACACCCAGATGCTCATCCCTGC...CCTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATGTCGAAGAGGTGGCTaGCGCGGGCCGTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FPEASHQLLRDASAYHFACRRGG*RGPWRR
Trigger: CCTGCGCCACGGCCCGCGCCAGCCACCTCTTCGACA...TGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATAACGCCACGTAAAAGATaGGGGTGTAGGAATTCACAA +
Preference number: 4 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGITPRKR*GCRNSQ
Trigger: TTGTGAATTCCTACACCCCCATCTTTTACGTGGCGT...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGCGGCCCAGAAGTCCTTaGAGATGTCGTACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: PTVTFRALVGAGSRLPWERPRSP*RCRTCF
Trigger: AAAACAAGTACGACATCTCCAAGGACTTCTGGGCCG...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGTCCTTGTGGATCTGCTaGCTGATGTCCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALSLWIC*LMSLGM
Trigger: CATCCCCAAGGACATCAGCCAGCAGATCCACAAGGA...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp TGTTTGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTTCAGCAGGAAAGCCTTaGAGATCAGCCTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: CLQKTQDPPGPGGSGKPPSAGKP*RSASPQ
Trigger: TTGAGGAGAGGCTGATCTTCAAGGCTTTCCTGCTGA...AGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TGTTTGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTTCTCAGCCACTCAACTaGTGGAAGGAAAAGGCGATG +
Preference number: 4 (lower is better)
Translates to: CLQKTQDPPGPGGSGKPPSQPLN*WKEKAM
Trigger: CATCGCCTTTTCCTTCCATCAGTTGAGTGGCTGAGA...AGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTTGGCCTTTGCTAAAATaGTGTTTCTCTTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPWPLLK*CFSWCL
Trigger: CAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCA...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGCTTTCATAGGTGTTaGTGTCAAGGGTCTAGACTC +
Preference number: 4 (lower is better)
Translates to: PTVTFRALVGAGSRLPWESFHRC*CQGSRL
Trigger: GAGTCTAGACCCTTGACATCAACACCTATGAAAGCT...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp CTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAACAACTCTGAGGTCGGCTTGCCAGCGACGCCCCCTTaGCCGGCAGGGGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LVNRFCPIRKMNNSEVGLPATPP*PAGGGP
Trigger: AGGACCACCCCCTGCCGGGCAAGGGGGCGTCGCTGG...CAAGCCGACCTCAGAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR GCA 90 bp AACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGTCTTCATCTTCGGGATaGCGATCTCGAACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NSDIPGPGGSGKPPALGESSSSG*RSRTGC
Trigger: ACAACCTGTTCGAGATCGGCATCCCGAAGATGAAGA...CTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp AACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGGGTAGTCTTTATACCTaGAGATCTGCACCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: NSDIPGPGGSGKPPALGEGSLYT*RSAPRS
Trigger: GCTACGAGGTGCAGATCTGCAGGTATAAAGACTACC...CTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGTCGAACAGGTTGTTCTaGATCAGCTGTTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALSNRLF*ISCFPS
Trigger: GCTGGGGAAACAGCTGATCCAGAACAACCTGTTCGA...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCCAGCAGCGCAAACAGTaGGGCCAGGGGGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRAQQRKQ*GQGEGG
Trigger: GCCTCCTTCCCCCTGGCCCCACTGTTTGCGCTGCTG...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TCCATTTTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATCCTGCCCAGCCCCGCTaGCATAGCTACAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: SIFPEASHQLLRDASAYHPAQPR*HSYRTP
Trigger: GGGCGTCCTGTAGCTATGCCAGCGGGGCTGGGCAGG...ATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAAAATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGACTCTGAGGTCGGCTTaGTGTGATGGGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LSRDNWDAPTPPVWLRDETLRSA*CDGGRC
Trigger: ACACCTGCCCCCATCACACCAAGCCGACCTCAGAGT...CTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGACAGTCTGCTGTGGCTaGAGAGGACCTGGTCACACG +
Preference number: 4 (lower is better)
Translates to: FPGITGMLPRPLCGSGMRTVCCG*RGPGHT
Trigger: CGTGTGACCAGGTCCTCTCCAGCCACAGCAGACTGT...CCTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS-3UTR TCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGCTTCCCAATGCCTCTaGGGATATTGTACCAGATTC +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALASQCL*GYCTRF
Trigger: GAATCTGGTACAATATCCTCAGAGGCATTGGGAAGC...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp TGTTTGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGGTAGTCTTTATACCTaGAGATCTGCACCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: CLQKTQDPPGPGGSGKPPGSLYT*RSAPRS
Trigger: GCTACGAGGTGCAGATCTGCAGGTATAAAGACTACC...AGGCGGCTTCCCGCTCCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGCCCATCGGTCAGGATaGCCGGCTGGCCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTAHRSG*PAGLPS
Trigger: GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGC...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGTGTTTTCATCCATGGTaGCGCATCCGTACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALCFHPW*RIRTGR
Trigger: TCTTCCTGTACGGATGCGCCACCATGGATGAAAACA...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCCCTCTCAACGATATTTaGTTAACTAATAAACTCCCT +
Preference number: 4 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGPLNDI*LTNKLP
Trigger: AGGGAGTTTATTAGTTAACCAAATATCGTTGAGAGG...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCAGCTTCCAGTGCTCCATaGAGGTGGCAGCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: FPEASHQLLRDASAYHFAASSAP*RWQPRG
Trigger: CCCTCTGGGCTGCCACCTTCATGGAGCACTGGAAGC...TGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGGTTTCTCTTGGTGCTTaGGAAATTTCAGAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: PTVTFRALVGAGSRLPWEVSLGA*EISESC
Trigger: ACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAAC...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR TCA 90 bp AACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGTGGCCTTTGCTAAAATaGTGTTTCTCTTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: NSDIPGPGGSGKPPALGEWPLLK*CFSWCL
Trigger: CAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCA...CTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR GCA 90 bp CTTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGATCGTGCAGTGGGTATaGAGCCGCGTACACACCATT +
Preference number: 4 (lower is better)
Translates to: LSRDNWDAPTPPVWLRDEIVQWV*SRVHTI
Trigger: AATGGTGTGTACGCGGCTGCATACCCACTGCACGAT...CTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTAGAAAACTCCATAGCGTaGCCACTCTTCGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLENSIA*PLFVQE
Trigger: CTCCTGTACGAAGAGTGGGCACGCTATGGAGTTTTC...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTAGGATGTTTTCATCCATaGTGGCGCATCCGTACAGGA +
Preference number: 4 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLGCFHP*WRIRTG
Trigger: TCCTGTACGGATGCGCCACCATGGATGAAAACATCC...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGCCTGGTCAGGAACTTaGACGCCAGCCGGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTAWSGT*TPAGPP
Trigger: AGGCGGGCCGGCTGGCGTCCAAGTTCCTGACCAGGC...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CCA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCCATCAGGCAGCCCCCTaGCGCACACTCTTCCATTCG +
Preference number: 4 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRAHQAAP*RTLFHS
Trigger: CGAATGGAAGAGTGTGCGCCAGGGGGCTGCCTGATG...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCCAGCAGCGCAAACAGTaGGGCCAGGGGGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: EASHQLLRDASAYHFASIQQRKQ*GQGEGG
Trigger: GCCTCCTTCCCCCTGGCCCCACTGTTTGCGCTGCTG...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCGGTCCAGGGGGTCATTaGGGGCCGTGCCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: EASHQLLRDASAYHFASIGPGGH*GPCRSG
Trigger: TCCAGAACGGCACGGCCCCCAATGACCCCCTGGACC...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTAACTTTGACCACAGTTaGCAGATTAAAGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPNFDHS*QIKGNV
Trigger: TACATTCCCTTTAATCTGCCAACTGTGGTCAAAGTT...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR TCA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCGGTCCCAGCGGTAGTTaGGTCGCATCTGTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRAGPSGS*VASVSA
Trigger: AGCGGAAACAGATGCGACTCAACTACCGCTGGGACC...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp CTTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGTCAGCAGGAAAGCCTTaGAGATCAGCCTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LSRDNWDAPTPPVWLRDESAGKP*RSASPQ
Trigger: TTGAGGAGAGGCTGATCTTCAAGGCTTTCCTGCTGA...CTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCGAGCGGGAAGCCGCCTaGCCTGGGAGAGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAIEREAA*PGRGCP
Trigger: TGGGCACCCTCTCCCAGGGCAGGCGGCTTCCCGCTC...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTACACCATCTGTGGAAATaGTTCCGAGGTCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLHHLWK*FRGHLS
Trigger: AGAGAGATGACCTCGGAAGCATTTCCACAGATGGTG...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGGATGTTTTCATCCATaGTGGCGCATCCGTACAGGA +
Preference number: 4 (lower is better)
Translates to: LSRDNWDAPTPPVWLRDEGCFHP*WRIRTG
Trigger: TCCTGTACGGATGCGCCACCATGGATGAAAACATCC...CTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAACAACTCTGAGGTCGGCTTGAGGGGGAGGAGTTCATaGCCAAGGCGGCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LVNRFCPIRKMNNSEVGLRGRSS*PRRRPW
Trigger: CCATGGCCGCCGCCTTGGCCATGAACTCCTCCCCCT...CAAGCCGACCTCAGAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAACAACTCTGAGGTCGGCTTGGGTCCAGGGGGTCATTaGGGGCCGTGCCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LVNRFCPIRKMNNSEVGLGPGGH*GPCRSG
Trigger: TCCAGAACGGCACGGCCCCCAATGACCCCCTGGACC...CAAGCCGACCTCAGAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAACAACTCTGAGGTCGGCTTGCAGTGGGGAGCCTGCTaGGGACGCCAAGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LVNRFCPIRKMNNSEVGLQWGAC*GRQGCC
Trigger: ACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTG...CAAGCCGACCTCAGAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGGGAGTTTTCTGTCGTTaGACTCGACGTTTTCACCGT +
Preference number: 4 (lower is better)
Translates to: FPGITGMLPRPLCGSGMRGVFCR*TRRFHR
Trigger: ACGGTGAAAACGTCGAGTTCAACGACAGAAAACTCC...CCTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGGGCCGTGGCGCAGGCTaGGCTCATCTTCCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: SEVISLCPFSGQPVLSHKGRGAG*AHLPVA
Trigger: AGCTACTGGAAGATGAGCTCAGCCTGCGCCACGGCC...CTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGCAACAAACCGGCCTTTaGAGAACGCCACGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: FPGITGMLPRPLCGSGMRQQTGL*RTPRKR
Trigger: TCTTTTACGTGGCGTTCTTCAAAGGCCGGTTTGTTG...CCTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp AACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGGGATCTGTGATTTTCTaGAGCACAGAGTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: NSDIPGPGGSGKPPALGEGSVIF*STELIF
Trigger: AAAAATCAACTCTGTGCTCCAGAAAATCACAGATCC...CTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCAGTCTCCATCGTGCAGTaGGTATGCAGCCGCGTACAC +
Preference number: 4 (lower is better)
Translates to: KASRGPLEALRLLETLTPVSIVQ*VCSRVH
Trigger: GTGTACGCGGCTGCATACCCACTGCACGATGGAGAC...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCGCAGGGATGAGCATCTaGGTGTACACGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: EASHQLLRDASAYHFASIAGMSI*VYTPSQ
Trigger: CTGGCTGGGCGTGTACACCCAGATGCTCATCCCTGC...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGCACACATCTCCATGCTaGGGATGTTTTCATCCATGG +
Preference number: 4 (lower is better)
Translates to: LSRDNWDAPTPPVWLRDEHTSPC*GCFHPW
Trigger: CCATGGATGAAAACATCCCCAGCATGGAGATGTGTG...CTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTAACGCCACGTAAAAGATaGGGGTGTAGGAATTCACAA +
Preference number: 4 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLTPRKR*GCRNSQ
Trigger: TTGTGAATTCCTACACCCCCATCTTTTACGTGGCGT...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCCAGGCTTTGGTGTTGTaGTGGTTGCACGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: EASHQLLRDASAYHFASIQALVL*WLHGGS
Trigger: CGAGCCGCCGTGCAACCACCACAACACCAAAGCCTG...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGACCTCGATCTTGGTaGGCCATCGGGCTATGCAGC +
Preference number: 4 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTGPRSW*AIGLCS
Trigger: GCTGCATAGCCCGATGGCTCACCAAGATCGAGGTCC...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATCGATGTCTTTGGCTCTaGCAGCTACCGGCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHRCLWL*QLPAFG
Trigger: TCCGAAGGCCGGTAGCTGTCAGAGCCAAAGACATCG...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGACCAGCGACGCCCCCTTaGCCGGCAGGGGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRPATPP*PAGGGP
Trigger: AGGACCACCCCCTGCCGGGCAAGGGGGCGTCGCTGG...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp TTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCACGAGCAGAAACAGTCTaGTGTGGCTGGAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: FPEASHQLLRDASAYHFARAETV*CGWRGP
Trigger: AGGTCCTCTCCAGCCACAGCAGACTGTTTCTGCTCG...TGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCCATTTCCATGTACTCTaGGGTGAGGCCCGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: EASHQLLRDASAYHFASIHFHVL*GEAREG
Trigger: CCCTTCGCGGGCCTCACCCCAGAGTACATGGAAATG...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATGGGGCCGTGCCGTTCTaGAAGTCACTGACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHGAVPF*KSLTLK
Trigger: CTTCAACGTCAGTGACTTCCAGAACGGCACGGCCCC...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp AATCAATCATTATTCTTGCGTGGGTTTTCCATTTTCCCTGAAGCATCGCACCAGCGTGGTAGGCATGGCTaGGGGCTGGGCTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: NQSLFLRGFSIFPEASHQRGRHG*GLGCRG
Trigger: GCCTCGGCAGCCCAGCCCCCAGCCATGCCTACCACG...CTGGTGCGATGCTTCAGGGAAAATGGAAAACCCACGCAAGAATAATGATTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTATGTCCTATCAGAAAGTaGTCCTCCATGTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLCPIRK*SSMFAE
Trigger: TTCTGCAAACATGGAGGACCACTTTCTGATAGGACA...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
3UTR CAA 72 bp AAGGAAAATGTCCTATCAGAAAGTGGTCCTCCATGTTaGCAGAAAACCCAGGACCCACCGGGCCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: KENVLSESGPPC*QKTQDPPGPGG
Trigger: CCCACCAGGGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATCCCCAAAATACTTCCTaGCCAGGTCGATGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHPQNTS*PGRWAG
Trigger: ACCAGCCCATCGACCTGGTCAGGAAGTATTTTGGGG...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp AGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTGCTCACTTTTCACCTCTAGGCGTACAGGAAGACAATaGTTCCCACGATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RRIQRRVSTGLCSLFTSRRTGRQ*FPRWRQ
Trigger: CTGCCTCCATCGTGGGAATCATTGTCTTCCTGTACG...CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGGGTCCCAGCGGTAGTTaGGTCGCATCTGTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SEVISLCPFSGQPVLSHKGPSGS*VASVSA
Trigger: AGCGGAAACAGATGCGACTCAACTACCGCTGGGACC...CTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TCCATTTTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATGCTTCAGGTAGCGGATaGGCTTCTTCATCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: SIFPEASHQLLRDASAYHASGSG*ASSSSG
Trigger: TCCCGAAGATGAAGAAGCTCATCCGCTACCTGAAGC...ATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAAAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp TCCATTTTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATAGTACAGGCCATACTTaGACTCGGCATCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SIFPEASHQLLRDASAYHSTGHT*TRHQGP
Trigger: TGGACCCTGATGCCGAGTGCAAGTATGGCCTGTACT...ATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAAAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR GCA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCAGGCAGGGGGTGGTCCTaGTTGACGCTGCGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSGRGWS*LTLRAP
Trigger: TGGGGCTCGCAGCGTCAAGCAGGACCACCCCCTGCC...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR GCA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCATGGTTGACGAAGCCGTaGATGGTCCCGTTCTTACTG +
Preference number: 4 (lower is better)
Translates to: KASRGPLEALRLLETLTPWLTKP*MVPFLL
Trigger: CAGTAAGAACGGGACCATGCACGGCTTCGTCAACCA...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAACAACTCTGAGGTCGGCTTGTGGTGTTGTGGTGGTTaGACGGCGGCTCGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LVNRFCPIRKMNNSEVGLWCCGG*TAARPS
Trigger: AGAAGGACGAGCCGCCGTGCAACCACCACAACACCA...CAAGCCGACCTCAGAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCACAAACCCGACTCCGTaGATTTTAGTGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRATNPTP*ILVSSS
Trigger: GGACGAGGACACTAAAATCCACGGAGTCGGGTTTGT...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CCA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATAGTCTCTTCATGGTCTaGGGCCTGTGCTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHSLFMV*GLCSAT
Trigger: AGTGGCTGAGCACAGGCCCCAGACCATGAAGAGACT...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGATGTCGAAGAGGTGGCTaGCGCGGGCCGTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRCRRGG*RGPWRR
Trigger: CCTGCGCCACGGCCCGCGCCAGCCACCTCTTCGACA...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCGCTTTTCTCCGTCTTTaGGACCTCGATCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRAAFLRL*DLDLGE
Trigger: CTCACCAAGATCGAGGTCCCAAAGACGGAGAAAAGC...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGGGCCGGCCCGCGCCTaGTCAGGAACTTGGACGCCA +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRGPARA*SGTWTP
Trigger: TGGCGTCCAAGTTCCTGACCAGGCGCGGGCCGGCCC...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CCA 90 bp TCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGCATTTCCATGTACTCTaGGGTGAGGCCCGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: SEVISLCPFSGQPVLSHKHFHVL*GEAREG
Trigger: CCCTTCGCGGGCCTCACCCCAGAGTACATGGAAATG...CTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGGTGACGAAGCCAAACTaGATGATCATTTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: LSRDNWDAPTPPVWLRDEVTKPN*MIISMY
Trigger: GTACATGGAAATGATCATCCAGTTTGGCTTCGTCAC...CTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCAAGCACCTTCTCCTTGTaGATCTGCTGGCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: FPEASHQLLRDASAYHFASTFSL*ICWLMS
Trigger: GGACATCAGCCAGCAGATCCACAAGGAGAAGGTGCT...TGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCACTCTGAGGTCGGCTTaGTGTGATGGGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTTLRSA*CDGGRC
Trigger: ACACCTGCCCCCATCACACCAAGCCGACCTCAGAGT...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCATGGCTGGAGAGGACCTaGTCACACGTTACGCATGAA +
Preference number: 4 (lower is better)
Translates to: KASRGPLEALRLLETLTPWLERT*SHVTHE
Trigger: TTCATGCGTAACGTGTGACCAGGTCCTCTCCAGCCA...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS-3UTR TCA 90 bp AATGTCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGCCCCAAAATACTTCCTaGCCAGGTCGATGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NVLSESGPPCLQKTQDPPPQNTS*PGRWAG
Trigger: ACCAGCCCATCGACCTGGTCAGGAAGTATTTTGGGG...CGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCACCATGTACTCTGGGGTaGGGCCCGCGAAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSPCTLG*GPRRAP
Trigger: TGGAGCCCTTCGCGGGCCTCACCCCAGAGTACATGG...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCGGTTCTGGAAGACGATaGCAAACGCCAGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAIGSGRR*QTPAGL
Trigger: CAGCCCGGCTGGCGTTTGTCATCGTCTTCCAGAACC...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCGACTTCTTGAAACCCTaGCACCATCTGTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRADFLKP*HHLWKC
Trigger: GCATTTCCACAGATGGTGTCAGGGTTTCAAGAAGTC...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCAGTCACACGTTACGCATaGAGACCTCCTTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: FPEASHQLLRDASAYHFAVTRYA*RPPWCY
Trigger: ATAGCACCAAGGAGGTCTTCATGCGTAACGTGTGAC...TGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS-3UTR GCA 90 bp TTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCAGAAAACTCCATAGCGTaGCCACTCTTCGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: FPEASHQLLRDASAYHFAENSIA*PLFVQE
Trigger: CTCCTGTACGAAGAGTGGGCACGCTATGGAGTTTTC...TGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp AATGTCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGAGCTGCTGCTTGTCTTaGTCCTCCCGCATGAACAGC +
Preference number: 4 (lower is better)
Translates to: NVLSESGPPCLQKTQDPPSCCLS*SSRMNS
Trigger: GCTGTTCATGCGGGAGGAGCAAGACAAGCAGCAGCT...CGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp TCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGAGCTGCTGCTTGTCTTaGTCCTCCCGCATGAACAGC +
Preference number: 4 (lower is better)
Translates to: SEVISLCPFSGQPVLSHKSCCLS*SSRMNS
Trigger: GCTGTTCATGCGGGAGGAGCAAGACAAGCAGCAGCT...CTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTGGCTGGGGGCTGGGCTaGCGAGGCTGTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVGWGLG*RGCLGR
Trigger: CCTGCCCAGACAGCCTCGGCAGCCCAGCCCCCAGCC...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTCCTTGTGGATCTGCTaGCTGATGTCCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHSLWIC*LMSLGM
Trigger: CATCCCCAAGGACATCAGCCAGCAGATCCACAAGGA...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGTGTCTGGGCAGGCTTTaGTGTTGTGGTGGTTGCACG +
Preference number: 4 (lower is better)
Translates to: SEVISLCPFSGQPVLSHKCLGRL*CCGGCT
Trigger: CGTGCAACCACCACAACACCAAAGCCTGCCCAGACA...CTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGACCTGCCCAGCCCCGCTaGCATAGCTACAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRPAQPR*HSYRTP
Trigger: GGGCGTCCTGTAGCTATGCCAGCGGGGCTGGGCAGG...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCAGACTTCTTGAAACCCTaGCACCATCTGTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: KASRGPLEALRLLETLTPDFLKP*HHLWKC
Trigger: GCATTTCCACAGATGGTGTCAGGGTTTCAAGAAGTC...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTGGGCTCCCCCGAGCCTaGATCCAGCGACGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVGLPRA*IQRRPL
Trigger: AAGGGGGCGTCGCTGGATGCAGGCTCGGGGGAGCCC...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCCCTCGTACTCCTCCCTaGGGAAGCGCTTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAIPRTPP*GSACHP
Trigger: AGGATGACAAGCGCTTCCGCAGGGAGGAGTACGAGG...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR GCA 90 bp CTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAACAACTCTGAGGTCGGCTTGATCGTGCAGTGGGTATaGAGCCGCGTACACACCATT +
Preference number: 4 (lower is better)
Translates to: LVNRFCPIRKMNNSEVGLIVQWV*SRVHTI
Trigger: AATGGTGTGTACGCGGCTGCATACCCACTGCACGAT...CAAGCCGACCTCAGAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTCATCTTCCAGTAGCTaGAGGTCTTGTCGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHSSSSS*RSCRKA
Trigger: CGCTTTGCGACAAGACCTGCAGCTACTGGAAGATGA...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp AGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTGCTCACTTTTCACCTCTAGGGACTCCTCTGGAATATaGCGGCGCTTCTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: RRIQRRVSTGLCSLFTSRDSSGI*RRFSLF
Trigger: AAACAAAGAGAAGCGCCGGCATATTCCAGAGGAGTC...CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR GCA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCAGGCGGCTCGTCCTTCTaGCGCTCCTTCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSGGSSF*RSFSIQ
Trigger: CTGGATGGAGAAGGAGCGGCAGAAGGACGAGCCGCC...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCCCAGCTTTTGCGCGATaGCTCGGCTTACCATTTTGC +
Preference number: 4 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTPAFAR*LGLPFC
Trigger: GCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGG...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCACACCATCTGTGGAAATaGTTCCGAGGTCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: KASRGPLEALRLLETLTPHHLWK*FRGHLS
Trigger: AGAGAGATGACCTCGGAAGCATTTCCACAGATGGTG...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCACGTTCCAGGGGGCATaGATTTTCACAAACCCGACT +
Preference number: 4 (lower is better)
Translates to: EASHQLLRDASAYHFASITFQGA*IFTNPT
Trigger: AGTCGGGTTTGTGAAAATCCATGCCCCCTGGAACGT...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CCA 90 bp AGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTGCTCACTTTTCACCTCTAGGTGTTTTCATCCATGGTaGCGCATCCGTACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RRIQRRVSTGLCSLFTSRCFHPW*RIRTGR
Trigger: TCTTCCTGTACGGATGCGCCACCATGGATGAAAACA...CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCATGTTTTCATCCATGGTaGCGCATCCGTACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KASRGPLEALRLLETLTPCFHPW*RIRTGR
Trigger: TCTTCCTGTACGGATGCGCCACCATGGATGAAAACA...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCCCAGGCGGATCTCGATaGTGTTGTTCAGCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAIPGGSR*CCSAAQ
Trigger: TTGCGCTGCTGAACAACATCATCGAGATCCGCCTGG...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp AGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTGCTCACTTTTCACCTCTAGGGTTTTCCATTTTCCCTaGAGCATCGCACCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RRIQRRVSTGLCSLFTSRVFHFP*SIAPAF
Trigger: AAAAGCTGGTGCGATGCTTCAGGGAAAATGGAAAAC...CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCCCTTTGCTACCTTATTaGCGTATTACCAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRAPLLPY*RITSHH
Trigger: ATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGG...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp AATGTCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGTTTCTACGGGCCTCTaGTCACTTTTCACCTCTAGG +
Preference number: 4 (lower is better)
Translates to: NVLSESGPPCLQKTQDPPVSTGL*SLFTSR
Trigger: CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAAC...CGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGTTTCTACGGGCCTCTaGTCACTTTTCACCTCTAGG +
Preference number: 4 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTVSTGL*SLFTSR
Trigger: CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAAC...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp AATGTCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGTGCCCATGCTGTACTTaGCCTTTGTACACGTCGTTC +
Preference number: 4 (lower is better)
Translates to: NVLSESGPPCLQKTQDPPCPCCT*PLYTSF
Trigger: GAACGACGTGTACAAAGGCCAAGTACAGCATGGGCA...CGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGGTTAGTGAGGTAGGCTaGGAACCGATCTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SEVISLCPFSGQPVLSHKVSEVG*EPISPC
Trigger: ACATGGAGAGATCGGTTCCCAGCCTACCTCACTAAC...CTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAACAACTCTGAGGTCGGCTTGGTTAGTGAGGTAGGCTaGGAACCGATCTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: LVNRFCPIRKMNNSEVGLVSEVG*EPISPC
Trigger: ACATGGAGAGATCGGTTCCCAGCCTACCTCACTAAC...CAAGCCGACCTCAGAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTCCTGCCCAGCCCCGCTaGCATAGCTACAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVPAQPR*HSYRTP
Trigger: GGGCGTCCTGTAGCTATGCCAGCGGGGCTGGGCAGG...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGACCCACGCCCCCTGTGTaGCTCAGGGATGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRPTPPV*LRDEAL
Trigger: AAGTGCCTCATCCCTGAGCCACACAGGGGGCGTGGG...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp AATGTCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGCAACAAACCGGCCTTTaGAGAACGCCACGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: NVLSESGPPCLQKTQDPPQQTGL*RTPRKR
Trigger: TCTTTTACGTGGCGTTCTTCAAAGGCCGGTTTGTTG...CGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCTATTCAGCTCTAGGATaGTCCTTGACAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTYSALG*SLTASS
Trigger: AGAGGAGGCTGTCAAGGATCATCCTAGAGCTGAATA...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp AATCAATCATTATTCTTGCGTGGGTTTTCCATTTTCCCTGAAGCATCGCACCAGTGTGGATCTGCTGGCTaGTGTCCTTGGGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: NQSLFLRGFSIFPEASHQCGSAG*CPWGCP
Trigger: CGGACATCCCCAAGGACATCAGCCAGCAGATCCACA...CTGGTGCGATGCTTCAGGGAAAATGGAAAACCCACGCAAGAATAATGATTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCATGTGTGGCTCAGGGATaGGGCACTTCTCTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSCVAQG*GTSLSA
Trigger: GGCTGAGAGAGAAGTGCCTCATCCCTGAGCCACACA...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAATGGTCTGGGGCCTGTaGTCAGCCACTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRMVWGL*SATLGW
Trigger: CCAGCCCAAAGTGGCTGAGCACAGGCCCCAGACCAT...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR GCA 90 bp TCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGTCGTGCTCCGGGTTTTaGTGTCGAAAAAGGAATCCT +
Preference number: 4 (lower is better)
Translates to: SEVISLCPFSGQPVLSHKSCSGF*CRKRNP
Trigger: AGGATTCCTTTTTCGACAGCAAAACCCGGAGCACGA...CTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR GCA 90 bp AATGTCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGTCTTCATCTTCGGGATaGCGATCTCGAACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NVLSESGPPCLQKTQDPPSSSSG*RSRTGC
Trigger: ACAACCTGTTCGAGATCGGCATCCCGAAGATGAAGA...CGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCTGGGGACGCCAAGGGTaGTGTTTCCTGCTTAATCAG +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAIWGRQG*CFLLNQ
Trigger: CTGATTAAGCAGGAAACAGCACCCTTGGCGTCCCCA...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTGGTCCAGGGGGTCATTaGGGGCCGTGCCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVGPGGH*GPCRSG
Trigger: TCCAGAACGGCACGGCCCCCAATGACCCCCTGGACC...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCAGCACCTTCTCCTTGTaGATCTGCTGGCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAISTFSL*ICWLMS
Trigger: GGACATCAGCCAGCAGATCCACAAGGAGAAGGTGCT...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGCTGCCGAGGCTGTCTaGGCAGGCTTTGGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRAAEAV*AGFGVV
Trigger: CACAACACCAAAGCCTGCCCAGACAGCCTCGGCAGC...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp TCCATTTTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTGTCCTATCAGAAAGTaGTCCTCCATGTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SIFPEASHQLLRDASAYHCPIRK*SSMFAE
Trigger: TTCTGCAAACATGGAGGACCACTTTCTGATAGGACA...ATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCGTAGGTGACACCTTTTaGAACCGGAATCAATCATTA +
Preference number: 4 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRAVGDTF*NRNQSL
Trigger: TAATGATTGATTCCGGTTCCAAAAGGTGTCACCTAC...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCAAAGCGGGCACATGGTaGTATTGTGTCTCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAIKAGTW*YCVSGH
Trigger: GTGACCAGAGACACAATATCACCATGTGCCCGCTTT...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCCGAAGCCAAACTGGATaGTCATTTCCATGTACTCTG +
Preference number: 4 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTRSQTG*SFPCTL
Trigger: CAGAGTACATGGAAATGATCATCCAGTTTGGCTTCG...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGATGTGTGGCTCAGGGATaGGGCACTTCTCTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRCVAQG*GTSLSA
Trigger: GGCTGAGAGAGAAGTGCCTCATCCCTGAGCCACACA...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCTGGCCTTTGCTAAAATaGTGTTTCTCTTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: EASHQLLRDASAYHFASIWPLLK*CFSWCL
Trigger: CAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCA...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp CTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAACAACTCTGAGGTCGGCTTGAATGTACGACACCTATaGACTTTGACCACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LVNRFCPIRKMNNSEVGLNVRHL*TLTTVG
Trigger: GCCAACTGTGGTCAAAGTTCATAGGTGTCGTACATT...CAAGCCGACCTCAGAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR GCA 90 bp TACAAAACCCACTTCAAACTACTTACTGTACAAGAGAAAAGAGAAGCATCAGATAAACGCCAGCCGGGCTaGCAGGACGGCCCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: YKTHFKLLTVQEKREASDKRQPG*QDGPEV
Trigger: GACTTCTGGGCCGTCCTGGCAGCCCGGCTGGCGTTT...ATCTGATGCTTCTCTTTTCTCTTGTACAGTAAGTAGTTTGAAGTGGGTTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTGGCCTGGTCAGCATCTaGTGCCGGCAGGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVGLVSI*CRQEAE
Trigger: TTCAGCCTCCTGCCGGCACCAGATGCTGACCAGGCC...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp CTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAACAACTCTGAGGTCGGCTTGGTGATATTGTGTCTCTaGTCACACATCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LVNRFCPIRKMNNSEVGLVILCL*SHISML
Trigger: CAGCATGGAGATGTGTGACCAGAGACACAATATCAC...CAAGCCGACCTCAGAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCTCGAACAGGTTGTTCTaGATCAGCTGTTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAISNRLF*ISCFPS
Trigger: GCTGGGGAAACAGCTGATCCAGAACAACCTGTTCGA...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGACATTTCCATGTACTCTaGGGTGAGGCCCGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRHFHVL*GEAREG
Trigger: CCCTTCGCGGGCCTCACCCCAGAGTACATGGAAATG...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTTGGGGATGTCCGGGATaGCCCAGTCCACAAAGTCGC +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVWGCPG*PSPQSR
Trigger: GCGACTTTGTGGACTGGGTCATCCCGGACATCCCCA...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATGTTTCTCTTGGTGCTTaGGAAATTTCAGAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHVSLGA*EISESC
Trigger: ACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAAC...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGATGTTTCCGCTTCCAGTaGTCCATGAAGGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRCFRFQ*SMKVAA
Trigger: GGCTGCCACCTTCATGGAGCACTGGAAGCGGAAACA...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCTCTTCATCTTCGGGATaGCGATCTCGAACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAISSSSG*RSRTGC
Trigger: ACAACCTGTTCGAGATCGGCATCCCGAAGATGAAGA...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCGGTAGTCTTTATACCTaGAGATCTGCACCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAIGSLYT*RSAPRS
Trigger: GCTACGAGGTGCAGATCTGCAGGTATAAAGACTACC...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAACAACTCTGAGGTCGGCTTGCCTTTGCTACCTTATTaGCGTATTACCAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LVNRFCPIRKMNNSEVGLPLLPY*RITSHH
Trigger: ATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGG...CAAGCCGACCTCAGAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCCGGGTCTCATTAATGTaGTACATCTTCTTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAIRVSLM*YIFFVG
Trigger: GCCGACGAAGAAGATGTACCACATTAATGAGACCCG...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAAGGAGAGTCTCTTCATaGTCTGGGGCCTGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRRRVSS*SGACAQ
Trigger: CTGAGCACAGGCCCCAGACCATGAAGAGACTCTCCT...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTCAGGCTTTGGTGTTGTaGTGGTTGCACGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVQALVL*WLHGGS
Trigger: CGAGCCGCCGTGCAACCACCACAACACCAAAGCCTG...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGCTTCAGGTAGCGGATaGGCTTCTTCATCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRASGSG*ASSSSG
Trigger: TCCCGAAGATGAAGAAGCTCATCCGCTACCTGAAGC...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGCCTTCGGAGCTCAGTaGCAAACTTTTTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRAFGAQ*QTFWRP
Trigger: TGGACGCCAAAAAGTTTGTCACTGAGCTCCGAAGGC...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTTGTGGATCTGCTGGCTaGTGTCCTTGGGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVCGSAG*CPWGCP
Trigger: CGGACATCCCCAAGGACATCAGCCAGCAGATCCACA...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTCATCGCACCAGCTTTTaGGCGATGCCTCGGCTTACC +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVHRTSF*AMPRLT
Trigger: GGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATG...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCATGCCCATGCTGTACTTaGCCTTTGTACACGTCGTTC +
Preference number: 4 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSCPCCT*PLYTSF
Trigger: GAACGACGTGTACAAAGGCCAAGTACAGCATGGGCA...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCAGCTTTTCTCCGTCTTTaGGACCTCGATCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSAFLRL*DLDLGE
Trigger: CTCACCAAGATCGAGGTCCCAAAGACGGAGAAAAGC...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCAGCTTCCCAATGCCTCTaGGGATATTGTACCAGATTC +
Preference number: 4 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSASQCL*GYCTRF
Trigger: GAATCTGGTACAATATCCTCAGAGGCATTGGGAAGC...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCAAGCCCTAAGACTTCTTaGAACCCTGACACCATCTGT +
Preference number: 4 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSSPKTS*NPDTIC
Trigger: ACAGATGGTGTCAGGGTTTCAAGAAGTCTTAGGGCT...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGATCATCTTCCAGTAGCTaGAGGTCTTGTCGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRSSSSS*RSCRKA
Trigger: CGCTTTGCGACAAGACCTGCAGCTACTGGAAGATGA...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCCTCGGCTTACCATTTTaGATCTATCTTAAGGAATTA +
Preference number: 4 (lower is better)
Translates to: EASHQLLRDASAYHFASILGLPF*IYLKEL
Trigger: TAATTCCTTAAGATAGATGCAAAATGGTAAGCCGAG...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp AATCAATCATTATTCTTGCGTGGGTTTTCCATTTTCCCTGAAGCATCGCACCAGAAGGGTGCTGTTTCCTaGTTAATCAGGGACACCTCT +
Preference number: 4 (lower is better)
Translates to: NQSLFLRGFSIFPEASHQKGAVS*LIRDTS
Trigger: AGAGGTGTCCCTGATTAAGCAGGAAACAGCACCCTT...CTGGTGCGATGCTTCAGGGAAAATGGAAAACCCACGCAAGAATAATGATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp AATCAATCATTATTCTTGCGTGGGTTTTCCATTTTCCCTGAAGCATCGCACCAGTCAGCCACTTTGGGCTaGATGGGATCTGTGATTTTC +
Preference number: 4 (lower is better)
Translates to: NQSLFLRGFSIFPEASHQSATLG*MGSVIF
Trigger: GAAAATCACAGATCCCATCCAGCCCAAAGTGGCTGA...CTGGTGCGATGCTTCAGGGAAAATGGAAAACCCACGCAAGAATAATGATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTAGTGAGGTAGGCTaGGAACCGATCTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRVSEVG*EPISPC
Trigger: ACATGGAGAGATCGGTTCCCAGCCTACCTCACTAAC...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp TACAAAACCCACTTCAAACTACTTACTGTACAAGAGAAAAGAGAAGCATCAGATCAGATGTTGATGATGTaGACGCTGCGGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: YKTHFKLLTVQEKREASDQMLMM*TLRSSA
Trigger: GGCCGAGGACCGCAGCGTCCACATCATCAACATCTG...ATCTGATGCTTCTCTTTTCTCTTGTACAGTAAGTAGTTTGAAGTGGGTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CCA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCACGGCCCAGAAGTCCTTaGAGATGTCGTACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSRPRSP*RCRTCF
Trigger: AAAACAAGTACGACATCTCCAAGGACTTCTGGGCCG...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp AATCAATCATTATTCTTGCGTGGGTTTTCCATTTTCCCTGAAGCATCGCACCAGAACATGACCAGGTTCTaGAAGACGATGACAAACGCC +
Preference number: 4 (lower is better)
Translates to: NQSLFLRGFSIFPEASHQNMTRF*KTMTNA
Trigger: GGCGTTTGTCATCGTCTTCCAGAACCTGGTCATGTT...CTGGTGCGATGCTTCAGGGAAAATGGAAAACCCACGCAAGAATAATGATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTCGTACAGGAAGACAATaGTTCCCACGATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVRTGRQ*FPRWRQ
Trigger: CTGCCTCCATCGTGGGAATCATTGTCTTCCTGTACG...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCAGTTTTCCATTTTCCCTaGAGCATCGCACCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSVFHFP*SIAPAF
Trigger: AAAAGCTGGTGCGATGCTTCAGGGAAAATGGAAAAC...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAAGCCCTAAGACTTCTTaGAACCCTGACACCATCTGT +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRSPKTS*NPDTIC
Trigger: ACAGATGGTGTCAGGGTTTCAAGAAGTCTTAGGGCT...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR GCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTATCGTGCAGTGGGTATaGAGCCGCGTACACACCATT +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVIVQWV*SRVHTI
Trigger: AATGGTGTGTACGCGGCTGCATACCCACTGCACGAT...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGACGGGTCTCATTAATGTaGTACATCTTCTTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRRVSLM*YIFFVG
Trigger: GCCGACGAAGAAGATGTACCACATTAATGAGACCCG...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGATCAGCCACTTTGGGCTaGATGGGATCTGTGATTTTC +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRSATLG*MGSVIF
Trigger: GAAAATCACAGATCCCATCCAGCCCAAAGTGGCTGA...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTTCCTTGTGGATCTGCTaGCTGATGTCCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVSLWIC*LMSLGM
Trigger: CATCCCCAAGGACATCAGCCAGCAGATCCACAAGGA...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCGTAGGTGACACCTTTTaGAACCGGAATCAATCATTA +
Preference number: 4 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAIVGDTF*NRNQSL
Trigger: TAATGATTGATTCCGGTTCCAAAAGGTGTCACCTAC...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTTCAGCAGGAAAGCCTTaGAGATCAGCCTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVSAGKP*RSASPQ
Trigger: TTGAGGAGAGGCTGATCTTCAAGGCTTTCCTGCTGA...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTGAAGATGAACAACTCTaGGGTCGGCTTGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVEDEQL*GRLGVM
Trigger: CATCACACCAAGCCGACCTCAGAGTTGTTCATCTTC...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR TCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTGGAGTTTTCTGTCGTTaGACTCGACGTTTTCACCGT +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVGVFCR*TRRFHR
Trigger: ACGGTGAAAACGTCGAGTTCAACGACAGAAAACTCC...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTCACACATCTCCATGCTaGGGATGTTTTCATCCATGG +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVHTSPC*GCFHPW
Trigger: CCATGGATGAAAACATCCCCAGCATGGAGATGTGTG...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTGACGAAGCCAAACTaGATGATCATTTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRVTKPN*MIISMY
Trigger: GTACATGGAAATGATCATCCAGTTTGGCTTCGTCAC...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR TCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTCGAAGCCAAACTGGATaGTCATTTCCATGTACTCTG +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVRSQTG*SFPCTL
Trigger: CAGAGTACATGGAAATGATCATCCAGTTTGGCTTCG...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR GCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTTTTCTGCAAAGCACCTaGCTTTGCTACCTTATTGCC +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVFLQST*LCYLIA
Trigger: GGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAA...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCAGGATCTGTGATTTTCTaGAGCACAGAGTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSGSVIF*STELIF
Trigger: AAAAATCAACTCTGTGCTCCAGAAAATCACAGATCC...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR TCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTTATTCAGCTCTAGGATaGTCCTCTTCCTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVYSALG*SSSSSK
Trigger: CTTTGAAGAGGAAGAGGATCATCCTAGAGCTGAATA...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CCA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGACCTCTCAACGATATTTaGTTAACTAATAAACTCCCT +
Preference number: 4 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRPLNDI*LTNKLP
Trigger: AGGGAGTTTATTAGTTAACCAAATATCGTTGAGAGG...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CCA 90 bp TACAAAACCCACTTCAAACTACTTACTGTACAAGAGAAAAGAGAAGCATCAGATAGCCACAGTCCTCTGTaGATTTGTGTACATTCACTT +
Preference number: 4 (lower is better)
Translates to: YKTHFKLLTVQEKREASDSHSPL*ICVHSL
Trigger: AAGTGAATGTACACAAATCCACAGAGGACTGTGGCT...ATCTGATGCTTCTCTTTTCTCTTGTACAGTAAGTAGTTTGAAGTGGGTTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR TCA 90 bp TACAAAACCCACTTCAAACTACTTACTGTACAAGAGAAAAGAGAAGCATCAGATGTTTCTCTTGGTGCTTaGGAAATTTCAGAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: YKTHFKLLTVQEKREASDVSLGA*EISESC
Trigger: ACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAAC...ATCTGATGCTTCTCTTTTCTCTTGTACAGTAAGTAGTTTGAAGTGGGTTTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR GCA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTCTCGGCTTACCATTTTaGATCTATCTTAAGGAATTA +
Preference number: 4 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVLGLPF*IYLKEL
Trigger: TAATTCCTTAAGATAGATGCAAAATGGTAAGCCGAG...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCCGCCTGGTCAGGAACTaGGACGCCAGCCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRRLVRN*DASRPA
Trigger: GGCGGGCCGGCTGGCGTCCAAGTTCCTGACCAGGCG...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS GCA 90 bp CGGGAGCGTCGAGTACTTCTCGTTGACCCTCATCGTGGCCGCCTGTaGGCTGGGACCGCCGGGCGGCGCGCCCTCCCCATCCACGGCCCC +
Preference number: 5 (lower is better)
Translates to: RERRVLLVDPHRGRL*AGTAGRRALPIHGP
Trigger: GGGGCCGTGGATGGGGAGGGCGCGCCGCCCGGCGGTCCCAGCGCACAGGCGGCCACGATGAGGGTCAACGAGAAGTACTCGACGCTCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS CCA 90 bp GCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTaGCCTGCCCAGCCCCGCTGGCATAGCTACAGGACGCCCCCGTGG +
Preference number: 5 (lower is better)
Translates to: AACPGRGCPSVRMPG*PAQPRWHSYRTPPW
Trigger: CCACGGGGGCGTCCTGTAGCTATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS TCA 90 bp TGTGGACGCTGCGGTCCTCGGCCGGGAGCGTCGAGTACTTCTCGTTaGCCCTCATCGTGGCCGCCTGTGCGCTGGGACCGCCGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: CGRCGPRPGASSTSR*PSSWPPVRWDRRAA
Trigger: CGCCGCCCGGCGGTCCCAGCGCACAGGCGGCCACGATGAGGGTCAACGAGAAGTACTCGACGCTCCCGGCCGAGGACCGCAGCGTCCACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS GCA 90 bp AGCGGGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATaGCCGGCTGGCCTGCCCAGCCCCGCTGGCATAGCTACAGGACGC +
Preference number: 5 (lower is better)
Translates to: SGKPPALGEGAHRSG*PAGLPSPAGIATGR
Trigger: GCGTCCTGTAGCTATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCCCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCAGGTCCAGGGGGTCATaGGGGGCCGTGCCGTTCTGG +
Preference number: 5 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSRSRGS*GAVPFW
Trigger: CCAGAACGGCACGGCCCCCAATGACCCCCTGGACCT...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTAGGGGGTGGTCCTGCTaGACGCTGCGAGCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPRGWSC*TLRAPE
Trigger: CTCTGGGGCTCGCAGCGTCAAGCAGGACCACCCCCT...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CAA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTCCCGCCTCCAGGAGGTaGCCCTCGTACTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPPASRR*PSYSSL
Trigger: CAGGGAGGAGTACGAGGGCAACCTCCTGGAGGCGGG...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CAA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCACTGTGACCCGGATGTaGGACCGCACGGAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSTVTRM*DRTEGE
Trigger: CTCCCCCTCCGTGCGGTCCAACATCCGGGTCACAGT...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS GCA 90 bp GGGTGGTCCTGCTTGACGCTGCGAGCCCCAGAGGGGGTGTCGCTGTaGTGCACCCTCCTGACCAGGGTCCGGTTGCCCGAGGGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GWSCLTLRAPEGVSL*CTLLTRVRLPEGLL
Trigger: CAAGAGGCCCTCGGGCAACCGGACCCTGGTCAGGAGGGTGCAGCACAGCGACACCCCCTCTGGGGCTCGCAGCGTCAAGCAGGACCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000530676.5
ENST00000531604.5
CDS-3UTR CAA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGGCCGCGTACACACCATaGGCCAGCAGGCTCGTGATG +
Preference number: 5 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQAAYTP*ASRLVM
Trigger: CATCACGAGCCTGCTGGCCAATGGTGTGTACGCGGC...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTACTGTGACCCGGATGTaGGACCGCACGGAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPTVTRM*DRTEGE
Trigger: CTCCCCCTCCGTGCGGTCCAACATCCGGGTCACAGT...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGGGCAGGCTTTGGTGTaGTGGTGGTTGCACGGCGGC +
Preference number: 5 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPGQALV*WWLHGG
Trigger: GCCGCCGTGCAACCACCACAACACCAAAGCCTGCCC...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS CCA 90 bp GCCCCCGTGGTAGGCATGGCTGGGGGCTGGGCTGCCGAGGCTGTCTaGGCAGGCTTTGGTGTTGTGGTGGTTGCACGGCGGCTCGTCCTT +
Preference number: 5 (lower is better)
Translates to: APVVGMAGGWAAEAV*AGFGVVVVARRLVL
Trigger: AAGGACGAGCCGCCGTGCAACCACCACAACACCAAAGCCTGCCCAGACAGCCTCGGCAGCCCAGCCCCCAGCCATGCCTACCACGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp AACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGAGGTCCAGGGGGTCATaGGGGGCCGTGCCGTTCTGG +
Preference number: 5 (lower is better)
Translates to: NSDIPGPGGSGKPPALGERSRGS*GAVPFW
Trigger: CCAGAACGGCACGGCCCCCAATGACCCCCTGGACCT...CTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGTTGGTGTTGTGGTGGTaGCACGGCGGCTCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQLVLWW*HGGSSF
Trigger: GAAGGACGAGCCGCCGTGCAACCACCACAACACCAA...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS CCA 90 bp AGGCATGGCTGGGGGCTGGGCTGCCGAGGCTGTCTGGGCAGGCTTTaGTGTTGTGGTGGTTGCACGGCGGCTCGTCCTTCTGCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: RHGWGLGCRGCLGRL*CCGGCTAARPSAAP
Trigger: AGGAGCGGCAGAAGGACGAGCCGCCGTGCAACCACCACAACACCAAAGCCTGCCCAGACAGCCTCGGCAGCCCAGCCCCCAGCCATGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCAAGTACAGGCCATACTaGCACTCGGCATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRKYRPY*HSASGS
Trigger: GGACCCTGATGCCGAGTGCAAGTATGGCCTGTACTT...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CAA 90 bp CTTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGTCCAGCGACGCCCCCTaGCCCGGCAGGGGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: LSRDNWDAPTPPVWLRDESSDAP*PGRGWS
Trigger: GGACCACCCCCTGCCGGGCAAGGGGGCGTCGCTGGA...CTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CAA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATATGCTGGCTGATGTCCTaGGGGATGTCCGGGATGACC +
Preference number: 5 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGICWLMS*GMSGMT
Trigger: GGTCATCCCGGACATCCCCAAGGACATCAGCCAGCA...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTTGCTGGCTGATGTCCTaGGGGATGTCCGGGATGACC +
Preference number: 5 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPCWLMS*GMSGMT
Trigger: GGTCATCCCGGACATCCCCAAGGACATCAGCCAGCA...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCAGCTGCTGCTTGTCTaGCTCCTCCCGCATGAACAG +
Preference number: 5 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSQLLLV*LLPHEQ
Trigger: CTGTTCATGCGGGAGGAGCAAGACAAGCAGCAGCTG...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTTTGGTGTTGTGGTGGTaGCACGGCGGCTCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPLVLWW*HGGSSF
Trigger: GAAGGACGAGCCGCCGTGCAACCACCACAACACCAA...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATAGCATCGCACCAGCTTTaGCGCGATGCCTCGGCTTAC +
Preference number: 5 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGIASHQL*RDASAY
Trigger: GTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGC...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCATCGCACCAGCTTTaGCGCGATGCCTCGGCTTAC +
Preference number: 5 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPASHQL*RDASAY
Trigger: GTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGC...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS CCA 90 bp CTGGGGGCTGGGCTGCCGAGGCTGTCTGGGCAGGCTTTGGTGTTGTaGTGGTTGCACGGCGGCTCGTCCTTCTGCCGCTCCTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: LGAGLPRLSGQALVL*WLHGGSSFCRSFSI
Trigger: GATGGAGAAGGAGCGGCAGAAGGACGAGCCGCCGTGCAACCACCACAACACCAAAGCCTGCCCAGACAGCCTCGGCAGCCCAGCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATATCGATGGCGCAGATGTaGATGATGTGGACGCTGCGG +
Preference number: 5 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGISMAQM*MMWTLR
Trigger: CCGCAGCGTCCACATCATCAACATCTGCGCCATCGA...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CAA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGGCAGGCTTTGGTGTaGTGGTGGTTGCACGGCGGC +
Preference number: 5 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALGQALV*WWLHGG
Trigger: GCCGCCGTGCAACCACCACAACACCAAAGCCTGCCC...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS GCA 90 bp ATAGCTACAGGACGCCCCCGTGGTAGGCATGGCTGGGGGCTGGGCTaGCGAGGCTGTCTGGGCAGGCTTTGGTGTTGTGGTGGTTGCACG +
Preference number: 5 (lower is better)
Translates to: IATGRPRGRHGWGLG*RGCLGRLWCCGGCT
Trigger: CGTGCAACCACCACAACACCAAAGCCTGCCCAGACAGCCTCGGCAGCCCAGCCCCCAGCCATGCCTACCACGGGGGCGTCCTGTAGCTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCATCGTGCTCCGGGTTTaGCTGTCGAAAAAGGAATCC +
Preference number: 5 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRIVLRV*LSKKES
Trigger: GGATTCCTTTTTCGACAGCAAAACCCGGAGCACGAT...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CAA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATGCCCATGCTGTACTaGGCCTTTGTACACGTCGTT +
Preference number: 5 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGMPMLY*AFVHVV
Trigger: AACGACGTGTACAAAGGCCAAGTACAGCATGGGCAT...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATATTTGGGACCTCGATCTaGGTGAGCCATCGGGCTATG +
Preference number: 5 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGIFGTSI*VSHRAM
Trigger: CATAGCCCGATGGCTCACCAAGATCGAGGTCCCAAA...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTTTTGGGACCTCGATCTaGGTGAGCCATCGGGCTATG +
Preference number: 5 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPFGTSI*VSHRAM
Trigger: CATAGCCCGATGGCTCACCAAGATCGAGGTCCCAAA...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCCCGATCTCGAACAGGTaGTTCTGGATCAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGPISNR*FWISCF
Trigger: GAAACAGCTGATCCAGAACAACCTGTTCGAGATCGG...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCTCAGTGACAAACTTTTaGGCGTCCAGGCGGATCTCG +
Preference number: 5 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSSVTNF*ASRRIS
Trigger: CGAGATCCGCCTGGACGCCAAAAAGTTTGTCACTGA...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTAAGGTCCAGGGGGTCATaGGGGGCCGTGCCGTTCTGG +
Preference number: 5 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLRSRGS*GAVPFW
Trigger: CCAGAACGGCACGGCCCCCAATGACCCCCTGGACCT...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGCAGCTGCTGCTTGTCTaGCTCCTCCCGCATGAACAG +
Preference number: 5 (lower is better)
Translates to: PTVTFRALVGAGSRLPWEQLLLV*LLPHEQ
Trigger: CTGTTCATGCGGGAGGAGCAAGACAAGCAGCAGCTG...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp GGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCCGCATGAAGACCTCCTaGGTGCTATCTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: GEGAHRSGCPAGLPSPAGRMKTS*VLSSKE
Trigger: TTCCTTGGAAGATAGCACCAAGGAGGTCTTCATGCG...GCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS-3UTR CAA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGCTGGTTAGGGGACAGTaGGGGCCATGTCCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALLVRGQ*GPCPWH
Trigger: GTGCCAGGGACATGGCCCCAACTGTCCCCTAACCAG...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCATCGTGCTCCGGGTTTaGCTGTCGAAAAAGGAATCC +
Preference number: 5 (lower is better)
Translates to: GSRLPWERVPIGQDARLAIVLRV*LSKKES
Trigger: GGATTCCTTTTTCGACAGCAAAACCCGGAGCACGAT...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CAA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCAGGAGTTTTCTGTCGTaGAACTCGACGTTTTCACCG +
Preference number: 5 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRRSFLS*NSTFSP
Trigger: CGGTGAAAACGTCGAGTTCAACGACAGAAAACTCCT...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCGGATCTCGATGATGTaGTTCAGCAGCGCAAACAGT +
Preference number: 5 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQRISMM*FSSANS
Trigger: ACTGTTTGCGCTGCTGAACAACATCATCGAGATCCG...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCACGGCCCAGAAGTCCTaGGAGATGTCGTACTTGTTT +
Preference number: 5 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSTAQKS*EMSYLF
Trigger: AAACAAGTACGACATCTCCAAGGACTTCTGGGCCGT...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GGAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCACGGCCCAGAAGTCCTaGGAGATGTCGTACTTGTTT +
Preference number: 5 (lower is better)
Translates to: GSRLPWERVPIGQDARLATAQKS*EMSYLF
Trigger: AAACAAGTACGACATCTCCAAGGACTTCTGGGCCGT...GGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS GCA 90 bp CTGGGCTGCCGAGGCTGTCTGGGCAGGCTTTGGTGTTGTGGTGGTTaGACGGCGGCTCGTCCTTCTGCCGCTCCTTCTCCATCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LGCRGCLGRLWCCGG*TAARPSAAPSPSRF
Trigger: AAACCTGGATGGAGAAGGAGCGGCAGAAGGACGAGCCGCCGTGCAACCACCACAACACCAAAGCCTGCCCAGACAGCCTCGGCAGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS GCA 90 bp AGTTGGGGCCATGTCCCTGGCACCTTGGCCTCTCTGGCCCTAGGATaGCTCTCCTGGAAACAGCATTGCTCACCACCTGGGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SWGHVPGTLASLALG*LSWKQHCSPPGRAW
Trigger: CCAGGCCCTCCCAGGTGGTGAGCAATGCTGTTTCCAGGAGAGGCATCCTAGGGCCAGAGAGGCCAAGGTGCCAGGGACATGGCCCCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp AACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGAGAAGTACAGGCCATACTaGCACTCGGCATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: NSDIPGPGGSGKPPALGEKYRPY*HSASGS
Trigger: GGACCCTGATGCCGAGTGCAAGTATGGCCTGTACTT...CTCTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp CCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCTGCTGTACTTGGCCTTaGTACACGTCGTTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PALGEGAHRSGCPAGLPSCCTWP*YTSFSS
Trigger: TGAAGAGAACGACGTGTACAAAGGCCAAGTACAGCA...GCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCTGGCATAATGCCCATGCTGTACTaGGCCTTTGTACACGTCGTT +
Preference number: 5 (lower is better)
Translates to: EGAHRSGCPAGLPSPAGIMPMLY*AFVHVV
Trigger: AACGACGTGTACAAAGGCCAAGTACAGCATGGGCAT...TATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCATGCCTCTGAGGATATaGTACCAGATTCCGATGTCT +
Preference number: 5 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRMPLRI*YQIPMS
Trigger: AGACATCGGAATCTGGTACAATATCCTCAGAGGCAT...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGGAGATCACGAAGGCATaGATGATGACAGCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: ACPGRGCPSVRMPGWPAQEITKA*MMTASF
Trigger: GAAGCTTGCTGTCATCATCAATGCCTTCGTGATCTC...CTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGCTGTCTGGGCAGGCTTaGGTGTTGTGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALLSGQA*VLWWLH
Trigger: GTGCAACCACCACAACACCAAAGCCTGCCCAGACAG...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTTGCTGTACTTGGCCTTaGTACACGTCGTTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPCCTWP*YTSFSS
Trigger: TGAAGAGAACGACGTGTACAAAGGCCAAGTACAGCA...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTGCCCAGCCCCGCCATGTCAGCTTCACTTaGTCAGTCTCTTTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: PGRGCPSVRMPGWPAQPRHVSFT*SVSLFL
Trigger: CAGAAACAAAGAGACTGACAAAGTGAAGCTGACATG...GCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGTTCAGCAGGAAAGCCTaGAAGATCAGCCTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PTVTFRALVGAGSRLPWEFSRKA*KISLSS
Trigger: TGAGGAGAGGCTGATCTTCAAGGCTTTCCTGCTGAA...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGTTGGAGATGTCGTACTaGTTTTCCGACCACGGCGGC +
Preference number: 5 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALLEMSY*FSDHGG
Trigger: GCCGCCGTGGTCGGAAAACAAGTACGACATCTCCAA...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS GCA 90 bp GGGCAGGCTTTGGTGTTGTGGTGGTTGCACGGCGGCTCGTCCTTCTaGCGCTCCTTCTCCATCCAGGTTTCCAGCAGCTGCTGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: GQALVLWWLHGGSSF*RSFSIQVSSSCCLS
Trigger: AGACAAGCAGCAGCTGCTGGAAACCTGGATGGAGAAGGAGCGGCAGAAGGACGAGCCGCCGTGCAACCACCACAACACCAAAGCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CCA 90 bp TCTGGCCCTAGGATGCCTCTCCTGGAAACAGCATTGCTCACCACCTaGGAGGGCCTGGTCAGCATCTGGTGCCGGCAGGAGGCTGAAACT +
Preference number: 5 (lower is better)
Translates to: SGPRMPLLETALLTT*EGLVSIWCRQEAET
Trigger: AGTTTCAGCCTCCTGCCGGCACCAGATGCTGACCAGGCCCTCCCAGGTGGTGAGCAATGCTGTTTCCAGGAGAGGCATCCTAGGGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp TTGTCCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGTCAGTGACAAACTTTTaGGCGTCCAGGCGGATCTCG +
Preference number: 5 (lower is better)
Translates to: LSNSDIPGPGGSGKPPALSVTNF*ASRRIS
Trigger: CGAGATCCGCCTGGACGCCAAAAAGTTTGTCACTGA...CAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp AGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTGCTCACTTTTCACCTCTAGGCCCGCCTCCAGGAGGTaGCCCTCGTACTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: RRIQRRVSTGLCSLFTSRPASRR*PSYSSL
Trigger: CAGGGAGGAGTACGAGGGCAACCTCCTGGAGGCGGG...CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CAA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGATGCCTCTGAGGATATaGTACCAGATTCCGATGTCT +
Preference number: 5 (lower is better)
Translates to: PTVTFRALVGAGSRLPWEMPLRI*YQIPMS
Trigger: AGACATCGGAATCTGGTACAATATCCTCAGAGGCAT...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCGGGCAGGCTTTGGTGTaGTGGTGGTTGCACGGCGGC +
Preference number: 5 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRAGQALV*WWLHGG
Trigger: GCCGCCGTGCAACCACCACAACACCAAAGCCTGCCC...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS TCA 90 bp GCCTGGTCAGCATCTGGTGCCGGCAGGAGGCTGAAACTAAGCAACTaGCTTCTCTCTACAGTAACACAGGGCCCCGCTGTGCTGGTGACC +
Preference number: 5 (lower is better)
Translates to: AWSASGAGRRLKLSN*LLSTVTQGPAVLVT
Trigger: GGTCACCAGCACAGCGGGGCCCTGTGTTACTGTAGAGAGAAGTCAGTTGCTTAGTTTCAGCCTCCTGCCGGCACCAGATGCTGACCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316296.9
ENST00000530676.5
CDS-3UTR CAA 90 bp AGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTGCTCACTTTTCACCTCTAGGACTGTGACCCGGATGTaGGACCGCACGGAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: RRIQRRVSTGLCSLFTSRTVTRM*DRTEGE
Trigger: CTCCCCCTCCGTGCGGTCCAACATCCGGGTCACAGT...CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAGCCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTGGCCTTGTTTCTCTTGGTGCTaGAGAAATTTCAGAGAGTTG +
Preference number: 5 (lower is better)
Translates to: EAACPGRGCPSVRMPGWPCFSWC*RNFREL
Trigger: CAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACA...AGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp CCAACAGTGACATTCCGGGCCCTGGTGGGAGCGGGAAGCCGCCTGCCCTGGGAGACTTTGTCAGTCTCTTaGTTTCTGGACTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: PTVTFRALVGAGSRLPWETLSVS*FLDSFF
Trigger: GAAGAAAGAGTCCAGAAACAAAGAGACTGACAAAGT...CTCCCAGGGCAGGCGGCTTCCCGCTCCCACCAGGGCCCGGAATGTCACTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTAACGGCCCAGAAGTCCTaGGAGATGTCGTACTTGTTT +
Preference number: 5 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLTAQKS*EMSYLF
Trigger: AAACAAGTACGACATCTCCAAGGACTTCTGGGCCGT...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS TCA 90 bp TGTGATGGTACACCAGGATGTAGTCCACCTTGCGCCGGCCGTCCCTaGAGTACAGGCCATACTTGCACTCGGCATCAGGGTCCACAGATA +
Preference number: 5 (lower is better)
Translates to: CDGTPGCSPPCAGRP*STGHTCTRHQGPQI
Trigger: TATCTGTGGACCCTGATGCCGAGTGCAAGTATGGCCTGTACTTCAGGGACGGCCGGCGCAAGGTGGACTACATCCTGGTGTACCATCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000530676.5
ENST00000531604.5
CDS CCA 90 bp CGCATGAACAGCTCCACCATGAGCACCTTCTCCTTGTGGATCTGCTaGCTGATGTCCTTGGGGATGTCCGGGATGACCCAGTCCACAAAG +
Preference number: 5 (lower is better)
Translates to: RMNSSTMSTFSLWIC*LMSLGMSGMTQSTK
Trigger: CTTTGTGGACTGGGTCATCCCGGACATCCCCAAGGACATCAGCCAGCAGATCCACAAGGAGAAGGTGCTCATGGTGGAGCTGTTCATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATGCCGCGTACACACCATaGGCCAGCAGGCTCGTGATG +
Preference number: 5 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHAAYTP*ASRLVM
Trigger: CATCACGAGCCTGCTGGCCAATGGTGTGTACGCGGC...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp CTTTCCAGGGATAACTGGGATGCTCCCACGCCCCCTGTGTGGCTCAGGGATGAGCCGATCTCGAACAGGTaGTTCTGGATCAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LSRDNWDAPTPPVWLRDEPISNR*FWISCF
Trigger: GAAACAGCTGATCCAGAACAACCTGTTCGAGATCGG...CTCATCCCTGAGCCACACAGGGGGCGTGGGAGCATCCCAGTTATCCCTGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp GTGGCTGACAGTGGGGAGCCTGCTGGGGACGCCAAGGGTGCTGTTTCCTGCTTAGAGATCACGAAGGCATaGATGATGACAGCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: VADSGEPAGDAKGAVSCLEITKA*MMTASF
Trigger: GAAGCTTGCTGTCATCATCAATGCCTTCGTGATCTC...TAAGCAGGAAACAGCACCCTTGGCGTCCCCAGCAGGCTCCCCACTGTCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS GCA 90 bp GATAAGGAGTTCAGCAGCACCTGGGAGGGCCTGGTCAGCATCTGGTaGCGGCAGGAGGCTGAAACTAAGCAACTGACTTCTCTCTACAGT +
Preference number: 5 (lower is better)
Translates to: DKEFSSTWEGLVSIW*RQEAETKQLTSLYS
Trigger: ACTGTAGAGAGAAGTCAGTTGCTTAGTTTCAGCCTCCTGCCGGCACCAGATGCTGACCAGGCCCTCCCAGGTGCTGCTGAACTCCTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316296.9
CDS GCA 90 bp GAACATGACCAGGTTCTGGAAGACGATGACAAACGCCAGCCGGGCTaGCAGGACGGCCCAGAAGTCCTTGGAGATGTCGTACTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: EHDQVLEDDDKRQPG*QDGPEVLGDVVLVF
Trigger: GAAAACAAGTACGACATCTCCAAGGACTTCTGGGCCGTCCTGGCAGCCCGGCTGGCGTTTGTCATCGTCTTCCAGAACCTGGTCATGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS GCA 90 bp GGGGTGAGCAGTTACTTAAGGCACCTTCCACGAGCAGAAACAGTCTaGTGTGGCTGGAGAGGACCTGGTCACACGTTACGCATGAAGACC +
Preference number: 5 (lower is better)
Translates to: GVSSYLRHLPRAETV*CGWRGPGHTLRMKT
Trigger: GGTCTTCATGCGTAACGTGTGACCAGGTCCTCTCCAGCCACAGCAGACTGTTTCTGCTCGTGGAAGGTGCCTTAAGTAACTGCTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS GCA 90 bp GAAACAGCATTGCTCACCACCTGGGAGGGCCTGGTCAGCATCTGGTaGCGGCAGGAGGCTGAAACTAAGCAACTGACTTCTCTCTACAGT +
Preference number: 5 (lower is better)
Translates to: ETALLTTWEGLVSIW*RQEAETKQLTSLYS
Trigger: ACTGTAGAGAGAAGTCAGTTGCTTAGTTTCAGCCTCCTGCCGGCACCAGATGCTGACCAGGCCCTCCCAGGTGGTGAGCAATGCTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp TCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGGTTTTGTCCCATAAGGCCGCGTACACACCATaGGCCAGCAGGCTCGTGATG +
Preference number: 5 (lower is better)
Translates to: SEVISLCPFSGQPVLSHKAAYTP*ASRLVM
Trigger: CATCACGAGCCTGCTGGCCAATGGTGTGTACGCGGC...CTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp TTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCACAGCTGCTGCTTGTCTaGCTCCTCCCGCATGAACAG +
Preference number: 5 (lower is better)
Translates to: FPEASHQLLRDASAYHFAQLLLV*LLPHEQ
Trigger: CTGTTCATGCGGGAGGAGCAAGACAAGCAGCAGCTG...TGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS CCA 90 bp GCACCTTCCACGAGCAGAAACAGTCTGCTGTGGCTGGAGAGGACCTaGTCACACGTTACGCATGAAGACCTCCTTGGTGCTATCTTCCAA +
Preference number: 5 (lower is better)
Translates to: APSTSRNSLLWLERT*SHVTHEDLLGAIFQ
Trigger: TTGGAAGATAGCACCAAGGAGGTCTTCATGCGTAACGTGTGACCAGGTCCTCTCCAGCCACAGCAGACTGTTTCTGCTCGTGGAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS-3UTR CAA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGTCGAGTACTTCTCGTaGACCCTCATCGTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTVEYFS*TLIVAA
Trigger: GGCGGCCACGATGAGGGTCAACGAGAAGTACTCGAC...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CAA 90 bp AGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTGCTCACTTTTCACCTCTAGGTTGGAGATGTCGTACTaGTTTTCCGACCACGGCGGC +
Preference number: 5 (lower is better)
Translates to: RRIQRRVSTGLCSLFTSRLEMSY*FSDHGG
Trigger: GCCGCCGTGGTCGGAAAACAAGTACGACATCTCCAA...CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS CCA 90 bp AGTTACTTAAGGCACCTTCCACGAGCAGAAACAGTCTGCTGTGGCTaGAGAGGACCTGGTCACACGTTACGCATGAAGACCTCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SYLRHLPRAETVCCG*RGPGHTLRMKTSLV
Trigger: CACCAAGGAGGTCTTCATGCGTAACGTGTGACCAGGTCCTCTCCAGCCACAGCAGACTGTTTCTGCTCGTGGAAGGTGCCTTAAGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS CCA 90 bp GAGCAGTTACTTAAGGCACCTTCCACGAGCAGAAACAGTCTGCTGTaGCTGGAGAGGACCTGGTCACACGTTACGCATGAAGACCTCCTT +
Preference number: 5 (lower is better)
Translates to: EQLLKAPSTSRNSLL*LERTWSHVTHEDLL
Trigger: AAGGAGGTCTTCATGCGTAACGTGTGACCAGGTCCTCTCCAGCCACAGCAGACTGTTTCTGCTCGTGGAAGGTGCCTTAAGTAACTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS-3UTR CAA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCTTCAGCAGGAAAGCCTaGAAGATCAGCCTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRAFSRKA*KISLSS
Trigger: TGAGGAGAGGCTGATCTTCAAGGCTTTCCTGCTGAA...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp TCCATTTTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTCAGTGACAAACTTTTaGGCGTCCAGGCGGATCTCG +
Preference number: 5 (lower is better)
Translates to: SIFPEASHQLLRDASAYHSVTNF*ASRRIS
Trigger: CGAGATCCGCCTGGACGCCAAAAAGTTTGTCACTGA...ATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAAAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp CTGGTCAACCGGTTTTGTCCCATAAGGAAGATGAACAACTCTGAGGTCGGCTTGCTGTCTGGGCAGGCTTaGGTGTTGTGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: LVNRFCPIRKMNNSEVGLLSGQA*VLWWLH
Trigger: GTGCAACCACCACAACACCAAAGCCTGCCCAGACAG...CAAGCCGACCTCAGAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS TCA 90 bp CACCCCCGCCATGGCTGTCTTAACCCTCTGCTTCCATTTGTTTGTTaGCTCCTCTGGAATATGCCGGCGCTTCTCTTTGTTTCTGGACTC +
Preference number: 5 (lower is better)
Translates to: HPRHGCLNPLLPFVC*LLWNMPALLFVSGL
Trigger: GAGTCCAGAAACAAAGAGAAGCGCCGGCATATTCCAGAGGAGTCAACAAACAAATGGAAGCAGAGGGTTAAGACAGCCATGGCGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS TCA 90 bp CAGAGCCACCTCCTGCTCCGCTCCATCAACTTACTTTTCTGTCGTTaGACTCGACGTTTTCACCGTTGTAGTCTCCATCGTGCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: QSHLLLRSINLLFCR*TRRFHRCSLHRAVG
Trigger: ACCCACTGCACGATGGAGACTACAACGGTGAAAACGTCGAGTTCAACGACAGAAAAGTAAGTTGATGGAGCGGAGCAGGAGGTGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529913.1
CDS GCA 90 bp ACATCTTCTTCGTCGGCATCTTCAGTTTCAGAAACTCGGCCTCTCTaGACAGCACGTTCCAGGGGGCATGGATTTTCACAAACCCGACTC +
Preference number: 5 (lower is better)
Translates to: TSSSSASSVSETRPL*TARSRGHGFSQTRL
Trigger: GAGTCGGGTTTGTGAAAATCCATGCCCCCTGGAACGTGCTGTGCAGAGAGGCCGAGTTTCTGAAACTGAAGATGCCGACGAAGAAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CAA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCAATGCCCATGCTGTACTaGGCCTTTGTACACGTCGTT +
Preference number: 5 (lower is better)
Translates to: KASRGPLEALRLLETLTPMPMLY*AFVHVV
Trigger: AACGACGTGTACAAAGGCCAAGTACAGCATGGGCAT...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCAGGAGTTTTCTGTCGTaGAACTCGACGTTTTCACCG +
Preference number: 5 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRARSFLS*NSTFSP
Trigger: CGGTGAAAACGTCGAGTTCAACGACAGAAAACTCCT...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp AGGAGGATTCAGAGGAGGGTTTCTACGGGCCTCTGCTCACTTTTCACCTCTAGGGGGCACATGGTGATATaGTGTCTCTGGTCACACATC +
Preference number: 5 (lower is better)
Translates to: RRIQRRVSTGLCSLFTSRGHMVI*CLWSHI
Trigger: GATGTGTGACCAGAGACACAATATCACCATGTGCCC...CCTAGAGGTGAAAAGTGAGCAGAGGCCCGTAGAAACCCTCCTCTGAATCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCTTGGAGATGTCGTACTaGTTTTCCGACCACGGCGGC +
Preference number: 5 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTLEMSY*FSDHGG
Trigger: GCCGCCGTGGTCGGAAAACAAGTACGACATCTCCAA...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCTGCTGGCTGATGTCCTaGGGGATGTCCGGGATGACC +
Preference number: 5 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAICWLMS*GMSGMT
Trigger: GGTCATCCCGGACATCCCCAAGGACATCAGCCAGCA...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCATGCTGTACTTGGCCTTaGTACACGTCGTTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: KASRGPLEALRLLETLTPCCTWP*YTSFSS
Trigger: TGAAGAGAACGACGTGTACAAAGGCCAAGTACAGCA...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCGGGCACATGGTGATATaGTGTCTCTGGTCACACATC +
Preference number: 5 (lower is better)
Translates to: EASHQLLRDASAYHFASIGHMVI*CLWSHI
Trigger: GATGTGTGACCAGAGACACAATATCACCATGTGCCC...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTCAGCAGGAAAGCCTaGAAGATCAGCCTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHFSRKA*KISLSS
Trigger: TGAGGAGAGGCTGATCTTCAAGGCTTTCCTGCTGAA...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATCCGATCTCGAACAGGTaGTTCTGGATCAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHPISNR*FWISCF
Trigger: GAAACAGCTGATCCAGAACAACCTGTTCGAGATCGG...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCATCTATCCGGATCTCGATGATGTaGTTCAGCAGCGCAAACAGT +
Preference number: 5 (lower is better)
Translates to: EASHQLLRDASAYHFASIRISMM*FSSANS
Trigger: ACTGTTTGCGCTGCTGAACAACATCATCGAGATCCG...GATAGATGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp TCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGGGCCATGCCTCTGAGGATATaGTACCAGATTCCGATGTCT +
Preference number: 5 (lower is better)
Translates to: SYQKVVLHVCRKPRTHRAMPLRI*YQIPMS
Trigger: AGACATCGGAATCTGGTACAATATCCTCAGAGGCAT...GGCCCGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp TTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATTTTGCAGCAAAGCACCTGCCTTaGCTACCTTATTGCCGTATT +
Preference number: 5 (lower is better)
Translates to: FPEASHQLLRDASAYHFAAKHLP*LPYCRI
Trigger: AATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGC...TGCAAAATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS TCA 90 bp AAACAGTCTGCTGTGGCTGGAGAGGACCTGGTCACACGTTACGCATaGAGACCTCCTTGGTGCTATCTTCCAAGGAAAGACAATGGCATT +
Preference number: 5 (lower is better)
Translates to: KQSAVAGEDLVTRYA*RPPWCYLPRKDNGI
Trigger: AATGCCATTGTCTTTCCTTGGAAGATAGCACCAAGGAGGTCTTCATGCGTAACGTGTGACCAGGTCCTCTCCAGCCACAGCAGACTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS GCA 90 bp ACTTTGTCAGTCAATTTCACCCCCGCCATGGCTGTCTTAACCCTCTaGTTCCATTTGTTTGTTGACTCCTCTGGAATATGCCGGCGCTTC +
Preference number: 5 (lower is better)
Translates to: TLSVNFTPAMAVLTL*FHLFVDSSGICRRF
Trigger: GAAGCGCCGGCATATTCCAGAGGAGTCAACAAACAAATGGAAGCAGAGGGTTAAGACAGCCATGGCGGGGGTGAAATTGACTGACAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CAA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTAGGGGGTGGTCCTGCTaGACGCTGCGAGCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVRGWSC*TLRAPE
Trigger: CTCTGGGGCTCGCAGCGTCAAGCAGGACCACCCCCT...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000530676.5
CDS-3UTR CAA 90 bp AATGTCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGAGGAGTTTTCTGTCGTaGAACTCGACGTTTTCACCG +
Preference number: 5 (lower is better)
Translates to: NVLSESGPPCLQKTQDPPRSFLS*NSTFSP
Trigger: CGGTGAAAACGTCGAGTTCAACGACAGAAAACTCCT...CGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCGAGATCACGAAGGCATaGATGATGACAGCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTEITKA*MMTASF
Trigger: GAAGCTTGCTGTCATCATCAATGCCTTCGTGATCTC...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp AATCAATCATTATTCTTGCGTGGGTTTTCCATTTTCCCTGAAGCATCGCACCAGCTGTCTGGGCAGGCTTaGGTGTTGTGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: NQSLFLRGFSIFPEASHQLSGQA*VLWWLH
Trigger: GTGCAACCACCACAACACCAAAGCCTGCCCAGACAG...CTGGTGCGATGCTTCAGGGAAAATGGAAAACCCACGCAAGAATAATGATTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp GAAACCCTGACACCATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTCTGGTCAACCGGTTTaGTCCCATAAGGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: ETLTPSVEMLPRSSLSAHSGQPV*SHKEDE
Trigger: TTCATCTTCCTTATGGGACAAAACCGGTTGACCAGA...ATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp TCCATTTTCCCTGAAGCATCGCACCAGCTTTTGCGCGATGCCTCGGCTTACCATACTTTGTCAGTCTCTTaGTTTCTGGACTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SIFPEASHQLLRDASAYHTLSVS*FLDSFF
Trigger: GAAGAAAGAGTCCAGAAACAAAGAGACTGACAAAGT...ATGGTAAGCCGAGGCATCGCGCAAAAGCTGGTGCGATGCTTCAGGGAAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS-3UTR CAA 90 bp AAAGCTTCCAGGGGACCCCTGGAAGCCCTAAGACTTCTTGAAACCCTGACACCATCTGCTTCCATTTGTTaGTTGACTCCTCTGGAATAT +
Preference number: 5 (lower is better)
Translates to: KASRGPLEALRLLETLTPSASIC*LTPLEY
Trigger: ATATTCCAGAGGAGTCAACAAACAAATGGAAGCAGA...TGGTGTCAGGGTTTCAAGAAGTCTTAGGGCTTCCAGGGGTCCCCTGGAAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CAA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCCGGATCTCGATGATGTaGTTCAGCAGCGCAAACAGT +
Preference number: 5 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAIRISMM*FSSANS
Trigger: ACTGTTTGCGCTGCTGAACAACATCATCGAGATCCG...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp CATCTGTGGAAATGCTTCCGAGGTCATCTCTCTCTGCCCATTTTCTGGTCAACCTCTGGTCAACCGGTTTaGTCCCATAAGGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: HLWKCFRGHLSLPIFWSTSGQPV*SHKEDE
Trigger: TTCATCTTCCTTATGGGACAAAACCGGTTGACCAGA...GGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTCTCCTGGAAACAGCATaGCTCACCACCTGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVLLETA*LTTWEG
Trigger: GCCCTCCCAGGTGGTGAGCAATGCTGTTTCCAGGAG...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS-3UTR CAA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCATGCCGGCGCTTCTCTTaGTTTCTGGACTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSCRRFS*FLDSFF
Trigger: GAAGAAAGAGTCCAGAAACAAAGAGAAGCGCCGGCA...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CAA 90 bp TTCTTTCTGCAAAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCGCTTCCATTTGTTTGTaGACTCCTCTGGAATATGCC +
Preference number: 5 (lower is better)
Translates to: FFLQSTCLCYLIAVLPAIASICL*TPLEYA
Trigger: GGCATATTCCAGAGGAGTCAACAAACAAATGGAAGC...GATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGCAGAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CAA 90 bp AATGTCCTATCAGAAAGTGGTCCTCCATGTTTGCAGAAAACCCAGGACCCACCGTGTTTCTCTTGGTGCTaGAGAAATTTCAGAGAGTTG +
Preference number: 5 (lower is better)
Translates to: NVLSESGPPCLQKTQDPPCFSWC*RNFREL
Trigger: CAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACA...CGGTGGGTCCTGGGTTTTCTGCAAACATGGAGGACCACTTTCTGATAGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTTTTGGGACCTCGATCTaGGTGAGCCATCGGGCTATG +
Preference number: 5 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVFGTSI*VSHRAM
Trigger: CATAGCCCGATGGCTCACCAAGATCGAGGTCCCAAA...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp AATCAATCATTATTCTTGCGTGGGTTTTCCATTTTCCCTGAAGCATCGCACCAGACCCTCTGCTTCCATTaGTTTGTTGACTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: NQSLFLRGFSIFPEASHQTLCFH*FVDSSG
Trigger: TCCAGAGGAGTCAACAAACAAATGGAAGCAGAGGGT...CTGGTGCGATGCTTCAGGGAAAATGGAAAACCCACGCAAGAATAATGATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CAA 90 bp AATCAATCATTATTCTTGCGTGGGTTTTCCATTTTCCCTGAAGCATCGCACCAGGCAAAGCACCTGCCTTaGCTACCTTATTGCCGTATT +
Preference number: 5 (lower is better)
Translates to: NQSLFLRGFSIFPEASHQAKHLP*LPYCRI
Trigger: AATACGGCAATAAGGTAGCAAAGGCAGGTGCTTTGC...CTGGTGCGATGCTTCAGGGAAAATGGAAAACCCACGCAAGAATAATGATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp CTCCTGGCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGACATGTCAGCTTCACTTaGTCAGTCAATTTCACCCCC +
Preference number: 5 (lower is better)
Translates to: LLAFAKMMFLLVLEKFQRHVSFT*SVNFTP
Trigger: GGGGGTGAAATTGACTGACAAAGTGAAGCTGACATG...TCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGCCAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS-3UTR CAA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCACCCTGCATAATGGCTTaGTGCAAAAACAAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSPCIMA*CKNKGK
Trigger: CTTTCCCTTGTTTTTGCACAAAGCCATTATGCAGGG...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531349.5
CDS-3UTR CAA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTGGGCACATGGTGATATaGTGTCTCTGGTCACACATC +
Preference number: 5 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVGHMVI*CLWSHI
Trigger: GATGTGTGACCAGAGACACAATATCACCATGTGCCC...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS-3UTR CAA 90 bp AAGCACCTGCCTTTGCTACCTTATTGCCGTATTACCAGCCATCATTTTGATTCACATGTCAGCTTCACTTaGTCAGTCTCTTTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: KHLPLLPYCRITSHHFDSHVSFT*SVSLFL
Trigger: CAGAAACAAAGAGACTGACAAAGTGAAGCTGACATG...TGAATCAAAATGATGGCTGGTAATACGGCAATAAGGTAGCAAAGGCAGGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS-3UTR CAA 90 bp GCCTTTGCTAAAATGATGTTTCTCTTGGTGCTTGAGAAATTTCAGAGAGTTGTTTGTTTCTCTTGGTGCTaGAGAAATTTCAGAGAGTTG +
Preference number: 5 (lower is better)
Translates to: AFAKMMFLLVLEKFQRVVCFSWC*RNFREL
Trigger: CAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACA...AACAACTCTCTGAAATTTCTCAAGCACCAAGAGAAACATCATTTTAGCAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS GCA 72 bp CCGCCTGCCCTGGGAGAGGGTGCCCATCGGTCAGGATaGCCGGCTGGCCTGCCCAGCCCCGCTGGCATAGCT +
Preference number: 6 (lower is better)
Translates to: PPALGEGAHRSG*PAGLPSPAGIA
Trigger: AGCTATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGGGCAGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355303.9
ENST00000530676.5
ENST00000531349.5
CDS GCA 72 bp CGAGTACTTCTCGTTGACCCTCATCGTGGCCGCCTGTaGGCTGGGACCGCCGGGCGGCGCGCCCTCCCCATC +
Preference number: 6 (lower is better)
Translates to: RVLLVDPHRGRL*AGTAGRRALPI
Trigger: GATGGGGAGGGCGCGCCGCCCGGCGGTCCCAGCGCACAGGCGGCCACGATGAGGGTCAACGAGAAGTACTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS CAA 90 bp ATGTGGACGCTGCGGTCCTCGGCCGGGAGCGTCGAGTACTTCTCGTaGACCCTCATCGTGGCCGCCTGTGCGCTGGGACCGCCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: MWTLRSSAGSVEYFS*TLIVAACALGPPGG
Trigger: GCCGCCCGGCGGTCCCAGCGCACAGGCGGCCACGATGAGGGTCAACGAGAAGTACTCGACGCTCCCGGCCGAGGACCGCAGCGTCCACAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531604.5
CDS GCA 72 bp TTGACGCTGCGAGCCCCAGAGGGGGTGTCGCTGTGCTaGACCCTCCTGACCAGGGTCCGGTTGCCCGAGGGC +
Preference number: 6 (lower is better)
Translates to: LTLRAPEGVSLC*TLLTRVRLPEG
Trigger: GCCCTCGGGCAACCGGACCCTGGTCAGGAGGGTGCAGCACAGCGACACCCCCTCTGGGGCTCGCAGCGTCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000530676.5
ENST00000531604.5
CDS CCA 72 bp CCTGGGAGAGGGTGCCCATCGGTCAGGATGCCCGGCTaGCCTGCCCAGCCCCGCTGGCATAGCTACAGGACG +
Preference number: 6 (lower is better)
Translates to: PGRGCPSVRMPG*PAQPRWHSYRT
Trigger: CGTCCTGTAGCTATGCCAGCGGGGCTGGGCAGGCCAGCCGGGCATCCTGACCGATGGGCACCCTCTCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS TCA 72 bp TGCGGTCCTCGGCCGGGAGCGTCGAGTACTTCTCGTTaGCCCTCATCGTGGCCGCCTGTGCGCTGGGACCGC +
Preference number: 6 (lower is better)
Translates to: CGPRPGASSTSR*PSSWPPVRWDR
Trigger: GCGGTCCCAGCGCACAGGCGGCCACGATGAGGGTCAACGAGAAGTACTCGACGCTCCCGGCCGAGGACCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531604.5
CDS GCA 72 bp TGCTTGACGCTGCGAGCCCCAGAGGGGGTGTCGCTGTaGTGCACCCTCCTGACCAGGGTCCGGTTGCCCGAG +
Preference number: 6 (lower is better)
Translates to: CLTLRAPEGVSL*CTLLTRVRLPE
Trigger: CTCGGGCAACCGGACCCTGGTCAGGAGGGTGCAGCACAGCGACACCCCCTCTGGGGCTCGCAGCGTCAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000530676.5
ENST00000531604.5
CDS GCA 72 bp GGACGCCCCCGTGGTAGGCATGGCTGGGGGCTGGGCTaGCGAGGCTGTCTGGGCAGGCTTTGGTGTTGTGGT +
Preference number: 6 (lower is better)
Translates to: GRPRGRHGWGLG*RGCLGRLWCCG
Trigger: ACCACAACACCAAAGCCTGCCCAGACAGCCTCGGCAGCCCAGCCCCCAGCCATGCCTACCACGGGGGCGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CAA 72 bp CTGCGGTCCTCGGCCGGGAGCGTCGAGTACTTCTCGTaGACCCTCATCGTGGCCGCCTGTGCGCTGGGACCG +
Preference number: 6 (lower is better)
Translates to: LRSSAGSVEYFS*TLIVAACALGP
Trigger: CGGTCCCAGCGCACAGGCGGCCACGATGAGGGTCAACGAGAAGTACTCGACGCTCCCGGCCGAGGACCGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355303.9
ENST00000531604.5
CDS CAA 90 bp TGGCTGGGGGCTGGGCTGCCGAGGCTGTCTGGGCAGGCTTTGGTGTaGTGGTGGTTGCACGGCGGCTCGTCCTTCTGCCGCTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: WLGAGLPRLSGQALV*WWLHGGSSFCRSFS
Trigger: GGAGAAGGAGCGGCAGAAGGACGAGCCGCCGTGCAACCACCACAACACCAAAGCCTGCCCAGACAGCCTCGGCAGCCCAGCCCCCAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CCA 72 bp GTAGGCATGGCTGGGGGCTGGGCTGCCGAGGCTGTCTaGGCAGGCTTTGGTGTTGTGGTGGTTGCACGGCGG +
Preference number: 6 (lower is better)
Translates to: VGMAGGWAAEAV*AGFGVVVVARR
Trigger: CCGCCGTGCAACCACCACAACACCAAAGCCTGCCCAGACAGCCTCGGCAGCCCAGCCCCCAGCCATGCCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS GCA 72 bp GGCCCGCCTCCAGGAGGTTGCCCTCGTACTCCTCCCTaGGGAAGCGCTTGTCATCCTCGTGGTAGTCCATCG +
Preference number: 6 (lower is better)
Translates to: GPPPGGCPRTPP*GSACHPRGSPS
Trigger: CGATGGACTACCACGAGGATGACAAGCGCTTCCGCAGGGAGGAGTACGAGGGCAACCTCCTGGAGGCGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000530676.5
ENST00000531604.5
CDS CAA 72 bp CCGAGGCTGTCTGGGCAGGCTTTGGTGTTGTGGTGGTaGCACGGCGGCTCGTCCTTCTGCCGCTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: PRLSGQALVLWW*HGGSSFCRSFS
Trigger: GGAGAAGGAGCGGCAGAAGGACGAGCCGCCGTGCAACCACCACAACACCAAAGCCTGCCCAGACAGCCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CAA 90 bp GCTGGGCTGCCGAGGCTGTCTGGGCAGGCTTTGGTGTTGTGGTGGTaGCACGGCGGCTCGTCCTTCTGCCGCTCCTTCTCCATCCAGGTT +
Preference number: 6 (lower is better)
Translates to: AGLPRLSGQALVLWW*HGGSSFCRSFSIQV
Trigger: AACCTGGATGGAGAAGGAGCGGCAGAAGGACGAGCCGCCGTGCAACCACCACAACACCAAAGCCTGCCCAGACAGCCTCGGCAGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS GCA 72 bp CGAGGCTGTCTGGGCAGGCTTTGGTGTTGTGGTGGTTaGACGGCGGCTCGTCCTTCTGCCGCTCCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: RGCLGRLWCCGG*TAARPSAAPSP
Trigger: TGGAGAAGGAGCGGCAGAAGGACGAGCCGCCGTGCAACCACCACAACACCAAAGCCTGCCCAGACAGCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CCA 72 bp ACGCCAGCCGGGCTGCCAGGACGGCCCAGAAGTCCTTaGAGATGTCGTACTTGTTTTCCGACCACGGCGGCT +
Preference number: 6 (lower is better)
Translates to: TPAGLPGRPRSP*RCRTCFPTTAA
Trigger: AGCCGCCGTGGTCGGAAAACAAGTACGACATCTCCAAGGACTTCTGGGCCGTCCTGGCAGCCCGGCTGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CCA 72 bp CTCCCCCTGGGGATCATCCCACCCGGGAGCTGCCTCTaGGGCTTCTCTGGCTTTGGATGCTGCATCCAGCAT +
Preference number: 6 (lower is better)
Translates to: LPLGIIPPGSCL*GFSGFGCCIQH
Trigger: ATGCTGGATGCAGCATCCAAAGCCAGAGAAGCCCCAGAGGCAGCTCCCGGGTGGGATGATCCCCAGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525494.1
CDS CCA 72 bp GGGTCTAGACTCCTCTACCCCTGGTTAGGGGACAGTTaGGGCCATGTCCCTGGCACCTTGGCCTCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: GSRLLYPWLGDS*GHVPGTLASLA
Trigger: GGCCAGAGAGGCCAAGGTGCCAGGGACATGGCCCCAACTGTCCCCTAACCAGGGGTAGAGGAGTCTAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS CAA 72 bp AACGCCAGCCGGGCTGCCAGGACGGCCCAGAAGTCCTaGGAGATGTCGTACTTGTTTTCCGACCACGGCGGC +
Preference number: 6 (lower is better)
Translates to: NASRAARTAQKS*EMSYLFSDHGG
Trigger: GCCGCCGTGGTCGGAAAACAAGTACGACATCTCCAAGGACTTCTGGGCCGTCCTGGCAGCCCGGCTGGCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CCA 72 bp AGGATGCCTCTCCTGGAAACAGCATTGCTCACCACCTaGGAGGGCCTGGTCAGCATCTGGTGCCGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: RMPLLETALLTT*EGLVSIWCRQE
Trigger: CTCCTGCCGGCACCAGATGCTGACCAGGCCCTCCCAGGTGGTGAGCAATGCTGTTTCCAGGAGAGGCATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS GCA 72 bp CATGTCCCTGGCACCTTGGCCTCTCTGGCCCTAGGATaGCTCTCCTGGAAACAGCATTGCTCACCACCTGGG +
Preference number: 6 (lower is better)
Translates to: HVPGTLASLALG*LSWKQHCSPPG
Trigger: CCCAGGTGGTGAGCAATGCTGTTTCCAGGAGAGGCATCCTAGGGCCAGAGAGGCCAAGGTGCCAGGGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS TCA 72 bp ACACCAGGATGTAGTCCACCTTGCGCCGGCCGTCCCTaGAGTACAGGCCATACTTGCACTCGGCATCAGGGT +
Preference number: 6 (lower is better)
Translates to: TPGCSPPCAGRP*STGHTCTRHQG
Trigger: ACCCTGATGCCGAGTGCAAGTATGGCCTGTACTTCAGGGACGGCCGGCGCAAGGTGGACTACATCCTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000530676.5
ENST00000531604.5
CDS GCA 72 bp CAGGTTCTGGAAGACGATGACAAACGCCAGCCGGGCTaGCAGGACGGCCCAGAAGTCCTTGGAGATGTCGTA +
Preference number: 6 (lower is better)
Translates to: QVLEDDDKRQPG*QDGPEVLGDVV
Trigger: TACGACATCTCCAAGGACTTCTGGGCCGTCCTGGCAGCCCGGCTGGCGTTTGTCATCGTCTTCCAGAACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CCA 72 bp CCACAGATAAGGAGTTCAGCAGCACCTGGGAGGGCCTaGTCAGCATCTGGTGCCGGCAGGAGGCTGAAACTA +
Preference number: 6 (lower is better)
Translates to: PQIRSSAAPGRA*SASGAGRRLKL
Trigger: TAGTTTCAGCCTCCTGCCGGCACCAGATGCTGACCAGGCCCTCCCAGGTGCTGCTGAACTCCTTATCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316296.9
CDS CCA 72 bp TCCTGGAAACAGCATTGCTCACCACCTGGGAGGGCCTaGTCAGCATCTGGTGCCGGCAGGAGGCTGAAACTA +
Preference number: 6 (lower is better)
Translates to: SWKQHCSPPGRA*SASGAGRRLKL
Trigger: TAGTTTCAGCCTCCTGCCGGCACCAGATGCTGACCAGGCCCTCCCAGGTGGTGAGCAATGCTGTTTCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS GCA 72 bp TTGCTCACCACCTGGGAGGGCCTGGTCAGCATCTGGTaGCGGCAGGAGGCTGAAACTAAGCAACTGACTTCT +
Preference number: 6 (lower is better)
Translates to: LLTTWEGLVSIW*RQEAETKQLTS
Trigger: AGAAGTCAGTTGCTTAGTTTCAGCCTCCTGCCGGCACCAGATGCTGACCAGGCCCTCCCAGGTGGTGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530676.5
CDS CCA 72 bp CGCATGAACAGCTCCACCATGAGCACCTTCTCCTTGTaGATCTGCTGGCTGATGTCCTTGGGGATGTCCGGG +
Preference number: 6 (lower is better)
Translates to: RMNSSTMSTFSL*ICWLMSLGMSG
Trigger: CCCGGACATCCCCAAGGACATCAGCCAGCAGATCCACAAGGAGAAGGTGCTCATGGTGGAGCTGTTCATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CAA 72 bp ACCTTGCGCCGGCCGTCCCTGAAGTACAGGCCATACTaGCACTCGGCATCAGGGTCCACAGATAAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: TLRRPSLKYRPY*HSASGSTDKEF
Trigger: GAACTCCTTATCTGTGGACCCTGATGCCGAGTGCAAGTATGGCCTGTACTTCAGGGACGGCCGGCGCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000530676.5
ENST00000531604.5
CDS TCA 72 bp GCATCTGGTGCCGGCAGGAGGCTGAAACTAAGCAACTaGCTTCTCTCTACAGTAACACAGGGCCCCGCTGTG +
Preference number: 6 (lower is better)
Translates to: ASGAGRRLKLSN*LLSTVTQGPAV
Trigger: CACAGCGGGGCCCTGTGTTACTGTAGAGAGAAGTCAGTTGCTTAGTTTCAGCCTCCTGCCGGCACCAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316296.9
ENST00000530676.5
CDS GCA 72 bp GTTTTCACCGTTGTAGTCTCCATCGTGCAGTGGGTATaGAGCCGCGTACACACCATTGGCCAGCAGGCTCGT +
Preference number: 6 (lower is better)
Translates to: VFTVVVSIVQWV*SRVHTIGQQAR
Trigger: ACGAGCCTGCTGGCCAATGGTGTGTACGCGGCTGCATACCCACTGCACGATGGAGACTACAACGGTGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000529913.1
ENST00000530480.5
ENST00000530676.5
ENST00000531349.5
CDS GCA 72 bp TTCTCCATCCAGGTTTCCAGCAGCTGCTGCTTGTCTTaGTCCTCCCGCATGAACAGCTCCACCATGAGCACC +
Preference number: 6 (lower is better)
Translates to: FSIQVSSSCCLS*SSRMNSSTMST
Trigger: GGTGCTCATGGTGGAGCTGTTCATGCGGGAGGAGCAAGACAAGCAGCAGCTGCTGGAAACCTGGATGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CAA 72 bp AGCACCTTCTCCTTGTGGATCTGCTGGCTGATGTCCTaGGGGATGTCCGGGATGACCCAGTCCACAAAGTCG +
Preference number: 6 (lower is better)
Translates to: STFSLWICWLMS*GMSGMTQSTKS
Trigger: CGACTTTGTGGACTGGGTCATCCCGGACATCCCCAAGGACATCAGCCAGCAGATCCACAAGGAGAAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CAA 90 bp TCCACCATGAGCACCTTCTCCTTGTGGATCTGCTGGCTGATGTCCTaGGGGATGTCCGGGATGACCCAGTCCACAAAGTCGCTCATGAAC +
Preference number: 6 (lower is better)
Translates to: STMSTFSLWICWLMS*GMSGMTQSTKSLMN
Trigger: GTTCATGAGCGACTTTGTGGACTGGGTCATCCCGGACATCCCCAAGGACATCAGCCAGCAGATCCACAAGGAGAAGGTGCTCATGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS CCA 72 bp ACGAGCAGAAACAGTCTGCTGTGGCTGGAGAGGACCTaGTCACACGTTACGCATGAAGACCTCCTTGGTGCT +
Preference number: 6 (lower is better)
Translates to: TSRNSLLWLERT*SHVTHEDLLGA
Trigger: AGCACCAAGGAGGTCTTCATGCGTAACGTGTGACCAGGTCCTCTCCAGCCACAGCAGACTGTTTCTGCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS TCA 72 bp GCTGTGGCTGGAGAGGACCTGGTCACACGTTACGCATaGAGACCTCCTTGGTGCTATCTTCCAAGGAAAGAC +
Preference number: 6 (lower is better)
Translates to: AVAGEDLVTRYA*RPPWCYLPRKD
Trigger: GTCTTTCCTTGGAAGATAGCACCAAGGAGGTCTTCATGCGTAACGTGTGACCAGGTCCTCTCCAGCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS CCA 72 bp TTCATGGTCTGGGGCCTGTGCTCAGCCACTTTGGGCTaGATGGGATCTGTGATTTTCTGGAGCACAGAGTTG +
Preference number: 6 (lower is better)
Translates to: FMVWGLCSATLG*MGSVIFWSTEL
Trigger: CAACTCTGTGCTCCAGAAAATCACAGATCCCATCCAGCCCAAAGTGGCTGAGCACAGGCCCCAGACCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000530480.5
ENST00000530676.5
ENST00000531604.5
CDS CCA 72 bp GACGAAGCCAAACTGGATGATCATTTCCATGTACTCTaGGGTGAGGCCCGCGAAGGGCTCCAGGTTGTAATC +
Preference number: 6 (lower is better)
Translates to: DEAKLDDHFHVL*GEAREGLQVVI
Trigger: GATTACAACCTGGAGCCCTTCGCGGGCCTCACCCCAGAGTACATGGAAATGATCATCCAGTTTGGCTTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000529636.5
ENST00000530676.5
ENST00000531349.5
CDS CCA 72 bp CTTAAGGCACCTTCCACGAGCAGAAACAGTCTGCTGTaGCTGGAGAGGACCTGGTCACACGTTACGCATGAA +
Preference number: 6 (lower is better)
Translates to: LKAPSTSRNSLL*LERTWSHVTHE
Trigger: TTCATGCGTAACGTGTGACCAGGTCCTCTCCAGCCACAGCAGACTGTTTCTGCTCGTGGAAGGTGCCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS CAA 72 bp ACCCCCGCCATGGCTGTCTTAACCCTCTGCTTCCATTaGTTTGTTGACTCCTCTGGAATATGCCGGCGCTTC +
Preference number: 6 (lower is better)
Translates to: TPAMAVLTLCFH*FVDSSGICRRF
Trigger: GAAGCGCCGGCATATTCCAGAGGAGTCAACAAACAAATGGAAGCAGAGGGTTAAGACAGCCATGGCGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS GCA 72 bp TCGTCGGCATCTTCAGTTTCAGAAACTCGGCCTCTCTaGACAGCACGTTCCAGGGGGCATGGATTTTCACAA +
Preference number: 6 (lower is better)
Translates to: SSASSVSETRPL*TARSRGHGFSQ
Trigger: TTGTGAAAATCCATGCCCCCTGGAACGTGCTGTGCAGAGAGGCCGAGTTTCTGAAACTGAAGATGCCGACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000530676.5
CDS CAA 90 bp TGTGGCTGGAGAGGACCTGGTCACACGTTACGCATGAAGACCTCCTaGGTGCTATCTTCCAAGGAAAGACAATGGCATTTATTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: CGWRGPGHTLRMKTS*VLSSKERQWHLFRE
Trigger: CTCCCTGAATAAATGCCATTGTCTTTCCTTGGAAGATAGCACCAAGGAGGTCTTCATGCGTAACGTGTGACCAGGTCCTCTCCAGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531349.5
CDS CAA 90 bp GTCAATTTCACCCCCGCCATGGCTGTCTTAACCCTCTGCTTCCATTaGTTTGTTGACTCCTCTGGAATATGCCGGCGCTTCTCTTTGTTT +
Preference number: 6 (lower is better)
Translates to: VNFTPAMAVLTLCFH*FVDSSGICRRFSLF
Trigger: AAACAAAGAGAAGCGCCGGCATATTCCAGAGGAGTCAACAAACAAATGGAAGCAGAGGGTTAAGACAGCCATGGCGGGGGTGAAATTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS TCA 72 bp CTCCTGCTCCGCTCCATCAACTTACTTTTCTGTCGTTaGACTCGACGTTTTCACCGTTGTAGTCTCCATCGT +
Preference number: 6 (lower is better)
Translates to: LLLRSINLLFCR*TRRFHRCSLHR
Trigger: ACGATGGAGACTACAACGGTGAAAACGTCGAGTTCAACGACAGAAAAGTAAGTTGATGGAGCGGAGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529913.1
CDS GCA 72 bp GTCAATTTCACCCCCGCCATGGCTGTCTTAACCCTCTaGTTCCATTTGTTTGTTGACTCCTCTGGAATATGC +
Preference number: 6 (lower is better)
Translates to: VNFTPAMAVLTL*FHLFVDSSGIC
Trigger: GCATATTCCAGAGGAGTCAACAAACAAATGGAAGCAGAGGGTTAAGACAGCCATGGCGGGGGTGAAATTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS CCA 72 bp CATGAAGATGATGGAGACCAAGTTAGTGAGGTAGGCTaGGAACCGATCTCTCCATGTCAGCTTCACTTTGTC +
Preference number: 6 (lower is better)
Translates to: HEDDGDQVSEVG*EPISPCQLHFV
Trigger: GACAAAGTGAAGCTGACATGGAGAGATCGGTTCCCAGCCTACCTCACTAACTTGGTCTCCATCATCTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000530676.5
ENST00000531300.1
ENST00000531349.5
CDS CAA 72 bp TTCTTCCCTCGCCTTGCCCCATGCTGTACTTGGCCTTaGTACACGTCGTTCTCTTCAAGATCTCATAGACAA +
Preference number: 6 (lower is better)
Translates to: FFPRLAPCCTWP*YTSFSSRSHRQ
Trigger: TTGTCTATGAGATCTTGAAGAGAACGACGTGTACAAAGGCCAAGTACAGCATGGGGCAAGGCGAGGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530480.5
CDS TCA 72 bp CATGGCTGTCTTAACCCTCTGCTTCCATTTGTTTGTTaGCTCCTCTGGAATATGCCGGCGCTTCTCTTTGTT +
Preference number: 6 (lower is better)
Translates to: HGCLNPLLPFVC*LLWNMPALLFV
Trigger: AACAAAGAGAAGCGCCGGCATATTCCAGAGGAGTCAACAAACAAATGGAAGCAGAGGGTTAAGACAGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355303.9
CDS CAA 72 bp ATGATGACAGCAAGCTTCCCAATGCCTCTGAGGATATaGTACCAGATTCCGATGTCTTTGGCTCTGACAGCT +
Preference number: 6 (lower is better)
Translates to: MMTASFPMPLRI*YQIPMSLALTA
Trigger: AGCTGTCAGAGCCAAAGACATCGGAATCTGGTACAATATCCTCAGAGGCATTGGGAAGCTTGCTGTCATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355303.9
ENST00000525494.1
ENST00000530676.5
ENST00000531349.5
CDS TCA 72 bp ACAAATCGTAAGCAAGACAGAAGGGGCTGCCAGAGATaGATAAAATTTCGGTTACCTCTTCCATTCGGAAGG +
Preference number: 6 (lower is better)
Translates to: TNRKQDRRGCQR*IKFRLPLPFGR
Trigger: CCTTCCGAATGGAAGAGGTAACCGAAATTTTATTCATCTCTGGCAGCCCCTTCTGTCTTGCTTACGATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316296.9
CDS GCA 72 bp TCTTCAAGATCTCATAGACAATCGTGCTCCGGGTTTTaGTGTCGAAAAAGGAATCCTTATCAGACAAGTCAA +
Preference number: 6 (lower is better)
Translates to: SSRSHRQSCSGF*CRKRNPYQTSQ
Trigger: TTGACTTGTCTGATAAGGATTCCTTTTTCGACAGCAAAACCCGGAGCACGATTGTCTATGAGATCTTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316296.9
ENST00000355303.9
ENST00000529913.1
ENST00000530480.5
ENST00000530676.5
ENST00000531604.5