RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKZF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163516

Ensembl transcript IDs: ENST00000323348.10, ENST00000409849.5, ENST00000410034.7, ENST00000416565.1, ENST00000435521.5, ENST00000436226.1, ENST00000447157.5, ENST00000453432.5, ENST00000460966.1, ENST00000461731.5, ENST00000463792.5, ENST00000464763.5, ENST00000465550.5, ENST00000467884.5, ENST00000468387.1, ENST00000474225.5, ENST00000475202.5, ENST00000477479.5, ENST00000483188.1, ENST00000486203.5, ENST00000490526.1, ENST00000491181.5, ENST00000493563.1, ENST00000494886.1, ENST00000496346.5

Found 355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCAAACCTAGGGCTGCTGTaGATGTGCCCTCTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: PHTSSPVFALVPECPSPPNLGLL*MCPLRS
Trigger: GGACCTGAGAGGGCACATTCACAGCAGCCCTAGGTT...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
3UTR-3UTR TCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCAACCTAGGGCTGCTGTaGATGTGCCCTCTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIINLGLL*MCPLRS
Trigger: GGACCTGAGAGGGCACATTCACAGCAGCCCTAGGTT...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
3UTR-3UTR TCA 90 bp AGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCAAACCTAGGGCTGCTGTaGATGTGCCCTCTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: SPVFALVPECPSPPSSKSNLGLL*MCPLRS
Trigger: GGACCTGAGAGGGCACATTCACAGCAGCCCTAGGTT...TGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
3UTR-3UTR GCA 90 bp CCTGATGAGGGCCTAGGACACAGCGGTAGGCATAAAGAAACTGGCCCTGGGCATCTTCTGATCCCGAGATaGTGGAAAGATCTCCTGTGG +
Preference number: 2 (lower is better)
Translates to: PDEGLGHSGRHKETGPGHLLIPR*WKDLLW
Trigger: CCACAGGAGATCTTTCCAGCATCTCGGGATCAGAAG...ATGCCCAGGGCCAGTTTCTTTATGCCTACCGCTGTGTCCTAGGCCCTCATCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435521.5
3UTR-3UTR GCA 90 bp TGCTGGAAAGATCTCCTGTGGAGCTCTGCTTTTCAAAGTCCAGGGCAGACAGGATTGTCCTTGAGACGTTaGTTTAGGTTAAACCGATGC +
Preference number: 2 (lower is better)
Translates to: CWKDLLWSSAFQSPGQTGLSLRR*FRLNRC
Trigger: GCATCGGTTTAACCTAAAGCAACGTCTCAAGGACAA...TCCTGTCTGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435521.5
3UTR-3UTR CAA 90 bp GAGATGCTGGAAAGATCTCCTGTGGAGCTCTGCTTTTCAAAGTCCAGGGCAGACAGGAGAGGCTTGTCCTaGAGACGTTGCTTTAGGTTA +
Preference number: 3 (lower is better)
Translates to: EMLERSPVELCFSKSRADRRGLS*RRCFRL
Trigger: TAACCTAAAGCAACGTCTCAAGGACAAGCCTCTCCT...GTCTGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCAGCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR CCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTCGCCTTAGCCCAGCTTaGCCCTGCCAGCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRARLSPA*PCQQVT
Trigger: CGTGACCTGCTGGCAGGGCCAAGCTGGGCTAAGGCG...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTGTAGGGGCTCCCAACTaGGCAGCGAGTCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAVGAPN*AASRRS
Trigger: AGAGCGCCGACTCGCTGCCCAGTTGGGAGCCCCTAC...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTCCGGAGCATCCGCGCTaGGGTCAAACAGGGAGATCG +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAPEHPR*GQTGRS
Trigger: CGATCTCCCTGTTTGACCTCAGCGCGGATGCTCCGG...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR GCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCACGCAGGAGCCGGGGCTaGATCTGGAGCCGGCGACAT +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPRRSRG*IWSRRH
Trigger: ATGTCGCCGGCTCCAGATGCAGCCCCGGCTCCTGCG...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR GCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAAGCCCCTGGGCTGTaGCCCGCTTGGCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPEAPGL*PAWPEP
Trigger: CGGTTCGGGCCAAGCGGGGCACAGCCCAGGGGCTTC...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTTCCTGCTGCCTCTGCTaGTGTTCCTCCCGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRASCCLC*CSSRCR
Trigger: GCGGCAACGGGAGGAACAGCAGCAGAGGCAGCAGGA...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCAGCCCAGCTGCAGCCATaGGCACCACGCAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPAQLQP*APRSLW
Trigger: CCAGAGACTGCGTGGTGCTCATGGCTGCAGCTGGGC...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTCAGCAGACGAACCACTaGGCCTCTTCCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAQQTNH*ASSSCS
Trigger: GCTGCAGCTGGAAGAGGCTCAGTGGTTCGTCTGCTG...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTGCGGCAAATCGCCGCTaGTCTTCTCGTTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAAANRR*SSRSRS
Trigger: GGAGCGTGAACGAGAAGAGCAGCGGCGATTTGCCGC...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGCCCAGCTGCAGCCATaGGCACCACGCAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPAQLQP*APRSLW
Trigger: CCAGAGACTGCGTGGTGCTCATGGCTGCAGCTGGGC...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTAACCTAGGGCTGCTGTaGATGTGCCCTCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRANLGLL*MCPLRS
Trigger: GGACCTGAGAGGGCACATTCACAGCAGCCCTAGGTT...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTGCTGCAGCTGCTGCATaGAGGAGAGTAAAGCCACCG +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAAAAAA*RRVKPP
Trigger: CGGTGGCTTTACTCTCCTGCATGCAGCAGCTGCAGC...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCCGGGCCCGAGAGTCCTaGACAGTGGGGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPRARES*TVGSAP
Trigger: AGGTGCTGACCCCACTGTGCAGGACTCTCGGGCCCG...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCGCCGGGCTGCCTTCTaGTCCCTTTTCCGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPRRAAF*SLFRVA
Trigger: GGCTACACGGAAAAGGGAGCAGAAGGCAGCCCGGCG...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCACGCCGGGCTGCCTTCTaGTCCCTTTTCCGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPRRAAF*SLFRVA
Trigger: GGCTACACGGAAAAGGGAGCAGAAGGCAGCCCGGCG...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCACAGGCCTTGGAGGGATaGCCCACAACTCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPQALEG*PTTPAA
Trigger: CGCTGCTGGAGTTGTGGGGCATCCCTCCAAGGCCTG...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTGAGAGTCCTGCACAGTaGGGTCAGCACCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAESPAQ*GQHLLP
Trigger: TGGAAGCAGGTGCTGACCCCACTGTGCAGGACTCTC...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCAAACGTCCCGGGAGCTaGGCGGCTCGCAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPKRPGS*AARKSS
Trigger: TGAGGACTTGCGAGCCGCTCAGCTCCCGGGACGTTT...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR TCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTTTCTCCCTCCGACCCTaGACCCTGTTTGGGAGATTC +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAFSLRP*TLFGRF
Trigger: GAATCTCCCAAACAGGGTTCAGGGTCGGAGGGAGAA...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATTCCAGAGCTCTGGCTaGCCAGGGGCTTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPFQSSG*PGALAS
Trigger: TGAGGCCAAAGCCCCTGGTCAGCCAGAGCTCTGGAA...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCTCTTCTCTCGGTCACTaGGGGCGGCAAATCGCCGCT +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPSSLGH*GRQIAA
Trigger: AGCGGCGATTTGCCGCCCTCAGTGACCGAGAGAAGA...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTATAGCACCAGCAAAGTaGCCAGCTGCAGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAIAPAK*PAAAMS
Trigger: GCTCATGGCTGCAGCTGGGCACTTTGCTGGTGCTAT...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTGCAGGGGTGCTCCCTTaGCTCCAAAGAACAAAGACC +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAAGVLP*LQRTKT
Trigger: GGTCTTTGTTCTTTGGAGGCAAGGGAGCACCCCTGC...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCCGGGCCCGAGAGTCCTaGACAGTGGGGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIRARES*TVGSAP
Trigger: AGGTGCTGACCCCACTGTGCAGGACTCTCGGGCCCG...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATGCTCCTGCTGCCTCTaGTGCTGTTCCTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPCSCCL*CCSSRC
Trigger: GCAACGGGAGGAACAGCAGCAGAGGCAGCAGGAGCA...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCAGCGGCAAATCGCCGCTaGTCTTCTCGTTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPAANRR*SSRSRS
Trigger: GGAGCGTGAACGAGAAGAGCAGCGGCGATTTGCCGC...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAAGGGCTGTGCCCCGCTTaGCCCGAACCGTATAGCGGT +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKGLCPA*PEPYSG
Trigger: ACCGCTATACGGTTCGGGCCAAGCGGGGCACAGCCC...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCAAGGTGGGTCTGCGGGTaGCGAGGGGGATATCCCAAA +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPRWVCG*RGGYPK
Trigger: TTTGGGATATCCCCCTCGCCACCCGCAGACCCACCT...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCGCTGACCAGGGGCTTTaGCCTCATCCAGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPADQGL*PHPAKG
Trigger: GCCCTTTGCTGGATGAGGCCAAAGCCCCTGGTCAGC...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCGCAACAGTATAAGGTaGCCGGGCCCGAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPRNSIR*PGPRVL
Trigger: CAGGACTCTCGGGCCCGGCCACCTTATACTGTTGCG...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp AGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCAGTAGGGGCTCCCAACTaGGCAGCGAGTCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SPVFALVPECPSPPSSKSVGAPN*AASRRS
Trigger: AGAGCGCCGACTCGCTGCCCAGTTGGGAGCCCCTAC...TGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCGTAGGGGCTCCCAACTaGGCAGCGAGTCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIVGAPN*AASRRS
Trigger: AGAGCGCCGACTCGCTGCCCAGTTGGGAGCCCCTAC...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCGCTGCAGCTGCTGCATaGAGGAGAGTAAAGCCACCG +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPAAAAA*RRVKPP
Trigger: CGGTGGCTTTACTCTCCTGCATGCAGCAGCTGCAGC...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTCGGGCCCGAGAGTCCTaGACAGTGGGGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSRARES*TVGSAP
Trigger: AGGTGCTGACCCCACTGTGCAGGACTCTCGGGCCCG...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCTGCTCCTGCTGCCTCTaGTGCTGTTCCTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPCSCCL*CCSSRC
Trigger: GCAACGGGAGGAACAGCAGCAGAGGCAGCAGGAGCA...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCAGCGAGTCGGCGCTCTaGAGCCAGAGCTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPSESAL*SQSSLL
Trigger: GAGAAGAGAGCTCTGGCTGCAGAGCGCCGACTCGCT...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAAGGAAGAGGGCCTCCCTaGCTGACGGCGATGATCCTG +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKGRGPP*LTAMIL
Trigger: CAGGATCATCGCCGTCAGGCAGGGAGGCCCTCTTCC...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCGCCTCCCCAGGCGCGTaGCTCACCAGGCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFAASPGA*LTRLRP
Trigger: GGGCCTGAGCCTGGTGAGCCACGCGCCTGGGGAGGC...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CCA 90 bp GGGGATCCTGATGAGGGCCTAGGACACAGCGGTAGGCATAAAGAAACTGGCCCTCAGTTCTGCCTCTTCTaGGGGATCCTGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GDPDEGLGHSGRHKETGPQFCLF*GILMRA
Trigger: GGCCCTCATCAGGATCCCCCAGAAGAGGCAGAACTG...AGGGCCAGTTTCTTTATGCCTACCGCTGTGTCCTAGGCCCTCATCAGGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR CCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTCGCCTTAGCCCAGCTTaGCCCTGCCAGCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSRLSPA*PCQQVT
Trigger: CGTGACCTGCTGGCAGGGCCAAGCTGGGCTAAGGCG...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCAACACGCTGTAGCTCTTaGAAGGTGGGTCTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPTRCSS*KVGLRV
Trigger: CACCCGCAGACCCACCTTCCAAGAGCTACAGCGTGT...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCACACGCTGTAGCTCTTaGAAGGTGGGTCTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPTRCSS*KVGLRV
Trigger: CACCCGCAGACCCACCTTCCAAGAGCTACAGCGTGT...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCCGCAACAGTATAAGGTaGCCGGGCCCGAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPRNSIR*PGPRVL
Trigger: CAGGACTCTCGGGCCCGGCCACCTTATACTGTTGCG...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCAAAGGGAGTCAGGCCTTaGAGGGATGCCCCACAACTC +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPKGVRP*RDAPQL
Trigger: GAGTTGTGGGGCATCCCTCCAAGGCCTGACTCCCTT...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp GAGATGCTGGAAAGATCTCCTGTGGAGCTCTGCTTTTCAAAGTCCAGGGCAGACAAACGTCCCGGGAGCTaGGCGGCTCGCAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EMLERSPVELCFSKSRADKRPGS*AARKSS
Trigger: TGAGGACTTGCGAGCCGCTCAGCTCCCGGGACGTTT...GTCTGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCAGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR TCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTCTTCTCTCGGTCACTaGGGGCGGCAAATCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIISSLGH*GRQIAA
Trigger: AGCGGCGATTTGCCGCCCTCAGTGACCGAGAGAAGA...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTCGATTGCCGGATTTCTaGAACACAACAATCCCCGTC +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRARLPDF*NTTIPV
Trigger: GACGGGGATTGTTGTGTTGCAGAAATCCGGCAATCG...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTCTTCTGATCCCGAGATaGTGGAAAGATCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRALLIPR*WKDLLW
Trigger: CCACAGGAGATCTTTCCAGCATCTCGGGATCAGAAG...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR GCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCGGGCTGGGAGCTAGCTaGAGCTTTAGCACTCCAACA +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPGLGAS*SFSTPT
Trigger: TGTTGGAGTGCTAAAGCTGCAGCTAGCTCCCAGCCC...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCCAGCTGCAGCTGCTaGATGCAGGAGAGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPSSCSC*MQESKA
Trigger: GGCTTTACTCTCCTGCATGCAGCAGCTGCAGCTGGA...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCGTGTAGCCTGCCGTaGCTCCATTTCTGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPPCSLP*LHFWCQ
Trigger: TTGACACCAGAAATGGAGGCACGGCAGGCTACACGG...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTCGCCGGGCTGCCTTCTaGTCCCTTTTCCGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSRRAAF*SLFRVA
Trigger: GGCTACACGGAAAAGGGAGCAGAAGGCAGCCCGGCG...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp AGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCAAGCGAGTCGGCGCTCTaGAGCCAGAGCTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SPVFALVPECPSPPSSKSSESAL*SQSSLL
Trigger: GAGAAGAGAGCTCTGGCTGCAGAGCGCCGACTCGCT...TGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCTCCCCAGGCGCGTaGCTCACCAGGCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFASPGA*LTRLRP
Trigger: GGGCCTGAGCCTGGTGAGCCACGCGCCTGGGGAGGC...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCGCACCACGCAGTCTCTaGGACCTCTACTTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPAPRSL*DLYFAG
Trigger: ACCTGCAAAGTAGAGGTCCCAGAGACTGCGTGGTGC...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCTGTAGCGCCTCAGGTTaGCTCCAGCAGAGTGTGATG +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPCSASG*LQQSVM
Trigger: CATCACACTCTGCTGGAGCCAACCTGAGGCGCTACA...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAAAGGTGGGTCTGCGGGTaGCGAGGGGGATATCCCAAA +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKRWVCG*RGGYPK
Trigger: TTTGGGATATCCCCCTCGCCACCCGCAGACCCACCT...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp AGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCAGGGGCAGCAACTGCCTaGGATGACTGTGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SPVFALVPECPSPPSSKSGAATA*DDCVEG
Trigger: GCCTTCCACACAGTCATCCCAGGCAGTTGCTGCCCC...TGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCGCTGACCAGGGGCTTTaGCCTCATCCAGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIADQGL*PHPAKG
Trigger: GCCCTTTGCTGGATGAGGCCAAAGCCCCTGGTCAGC...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCCGCAACAGTATAAGGTaGCCGGGCCCGAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIRNSIR*PGPRVL
Trigger: CAGGACTCTCGGGCCCGGCCACCTTATACTGTTGCG...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCACCGTGCCTCCATTTCTaGTGTCAATGGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPPCLHF*CQWSWH
Trigger: GTGCCAGGACCATTGACACCAGAAATGGAGGCACGG...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTCAGCAGACGAACCACTaGGCCTCTTCCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSQQTNH*ASSSCS
Trigger: GCTGCAGCTGGAAGAGGCTCAGTGGTTCGTCTGCTG...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCATAGCACCAGCAAAGTaGCCAGCTGCAGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPIAPAK*PAAAMS
Trigger: GCTCATGGCTGCAGCTGGGCACTTTGCTGGTGCTAT...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCCCCCCTTTGCAGGGGTaGTCCCTTGCCTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIPPLQG*SLASKE
Trigger: TTCTTTGGAGGCAAGGGAGCACCCCTGCAAAGGGGG...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAACCCCCTTTGCAGGGGTaGTCCCTTGCCTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKPPLQG*SLASKE
Trigger: TTCTTTGGAGGCAAGGGAGCACCCCTGCAAAGGGGG...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCTCCAGCTGCAGCTGCTaGATGCAGGAGAGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPSSCSC*MQESKA
Trigger: GGCTTTACTCTCCTGCATGCAGCAGCTGCAGCTGGA...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTGCGGCAAATCGCCGCTaGTCTTCTCGTTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSAANRR*SSRSRS
Trigger: GGAGCGTGAACGAGAAGAGCAGCGGCGATTTGCCGC...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCACTGATCCCGAGATGCTaGAAAGATCTCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPLIPRC*KDLLWS
Trigger: GCTCCACAGGAGATCTTTCCAGCATCTCGGGATCAG...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CCA 90 bp AGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCACAGTTCTGCCTCTTCTaGGGGATCCTGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPVFALVPECPSPPSSKSQFCLF*GILMRA
Trigger: GGCCCTCATCAGGATCCCCCAGAAGAGGCAGAACTG...TGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCGGGCTGTGCCCCGCTTaGCCCGAACCGTATAGCGGT +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPGLCPA*PEPYSG
Trigger: ACCGCTATACGGTTCGGGCCAAGCGGGGCACAGCCC...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCACCTGGGATGACTGTGTaGAAGGCTCCTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPPGMTV*KAPLLE
Trigger: CTCAAGAAGAGGAGCCTTCCACACAGTCATCCCAGG...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTGGGGCAGCAACTGCCTaGGATGACTGTGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSGAATA*DDCVEG
Trigger: GCCTTCCACACAGTCATCCCAGGCAGTTGCTGCCCC...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCAAGGGAGTCAGGCCTTaGAGGGATGCCCCACAACTC +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIKGVRP*RDAPQL
Trigger: GAGTTGTGGGGCATCCCTCCAAGGCCTGACTCCCTT...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCTGGAGGCAACGTGTaGAGCAGAAAGAGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPPGGNV*SRKRSR
Trigger: TCGACTTCTCTTTCTGCTCCACACGTTGCCTCCAGG...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCCCAGTGTGTCTGAGGTaGGTGCAGTCTGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIPVCLR*VQSDCF
Trigger: GAAGCAGTCAGACTGCACTCACCTCAGACACACTGG...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAACCAGTGTGTCTGAGGTaGGTGCAGTCTGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKPVCLR*VQSDCF
Trigger: GAAGCAGTCAGACTGCACTCACCTCAGACACACTGG...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCAGTTTTCCAGTGTGTCTaGGGTGAGTGCAGTCTGACT +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPVFQCV*GECSLT
Trigger: AGTCAGACTGCACTCACCTCAGACACACTGGAAAAC...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp AGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATTCTCCCTCCGACCCTaGACCCTGTTTGGGAGATTC +
Preference number: 4 (lower is better)
Translates to: SPVFALVPECPSPPSSKSFSLRP*TLFGRF
Trigger: GAATCTCCCAAACAGGGTTCAGGGTCGGAGGGAGAA...TGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TGTGGAGCTCTGCTTTTCAAAGTCCAGGGCAGACAGGAGAGGCTTGTCCTTGAGTCCCGATCCAGTGTCTaGAAGTCCTCCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: CGALLFKVQGRQERLVLESRSSV*KSSSLA
Trigger: AGCCAGTGAGGAGGACTTGCAGACACTGGATCGGGA...CTCAAGGACAAGCCTCTCCTGTCTGCCCTGGACTTTGAAAAGCAGAGCTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR GCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCGCAGGGGTGCTCCCTTaGCTCCAAAGAACAAAGACC +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIAGVLP*LQRTKT
Trigger: GGTCTTTGTTCTTTGGAGGCAAGGGAGCACCCCTGC...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCAGGAGATTCCTCATTCTaGCCCAGCGCTTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPGDSSF*PSASFS
Trigger: TGAAAAGGAAGCGCTGGGGCAGAATGAGGAATCTCC...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAAGGGCTGGGAGCTAGCTaGAGCTTTAGCACTCCAACA +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKGLGAS*SFSTPT
Trigger: TGTTGGAGTGCTAAAGCTGCAGCTAGCTCCCAGCCC...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCGGAAGAGGGCCTCCCTaGCTGACGGCGATGATCCTG +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPGRGPP*LTAMIL
Trigger: CAGGATCATCGCCGTCAGGCAGGGAGGCCCTCTTCC...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTGTAGCGCCTCAGGTTaGCTCCAGCAGAGTGTGATG +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIICSASG*LQQSVM
Trigger: CATCACACTCTGCTGGAGCCAACCTGAGGCGCTACA...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCTGGTGTCAATGGTCCTaGCACCTGAGCCTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPWCQWS*HLSLVV
Trigger: TACAACAAGGCTCAGGTGCCAGGACCATTGACACCA...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATGGTGTCAATGGTCCTaGCACCTGAGCCTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPWCQWS*HLSLVV
Trigger: TACAACAAGGCTCAGGTGCCAGGACCATTGACACCA...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCCGGAGCATCCGCGCTaGGGTCAAACAGGGAGATCG +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFAPEHPR*GQTGRS
Trigger: CGATCTCCCTGTTTGACCTCAGCGCGGATGCTCCGG...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR TCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTCCAGTGTGTCTGAGGTaGGTGCAGTCTGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSPVCLR*VQSDCF
Trigger: GAAGCAGTCAGACTGCACTCACCTCAGACACACTGG...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGTTTTCCAGTGTGTCTaGGGTGAGTGCAGTCTGACT +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPVFQCV*GECSLT
Trigger: AGTCAGACTGCACTCACCTCAGACACACTGGAAAAC...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCAGTCCTCAGGTCGATTaGCGGATTTCTGCAACACAA +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPSPQVD*RISATQ
Trigger: TTGTGTTGCAGAAATCCGGCAATCGACCTGAGGACT...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTATAGCACCAGCAAAGTaGCCAGCTGCAGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSIAPAK*PAAAMS
Trigger: GCTCATGGCTGCAGCTGGGCACTTTGCTGGTGCTAT...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTCCGTGTAGCCTGCCGTaGCTCCATTTCTGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSPCSLP*LHFWCQ
Trigger: TTGACACCAGAAATGGAGGCACGGCAGGCTACACGG...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTGCTCCTGCTGCCTCTaGTGCTGTTCCTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPCSCCL*CCSSRC
Trigger: GCAACGGGAGGAACAGCAGCAGAGGCAGCAGGAGCA...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCAGGCCTTGGAGGGATaGCCCACAACTCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFAQALEG*PTTPAA
Trigger: CGCTGCTGGAGTTGTGGGGCATCCCTCCAAGGCCTG...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCGGAAGAGGGCCTCCCTaGCTGACGGCGATGATCCTG +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFAGRGPP*LTAMIL
Trigger: CAGGATCATCGCCGTCAGGCAGGGAGGCCCTCTTCC...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp AGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCACTGATCCCGAGATGCTaGAAAGATCTCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SPVFALVPECPSPPSSKSLIPRC*KDLLWS
Trigger: GCTCCACAGGAGATCTTTCCAGCATCTCGGGATCAG...TGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CCA 90 bp GCTGGAAAGATCTCCTGTGGAGCTCTGCTTTTCAAAGTCCAGGGCAGACAGGAGCTGATCCCGAGATGCTaGAAAGATCTCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: AGKISCGALLFKVQGRQELIPRC*KDLLWS
Trigger: GCTCCACAGGAGATCTTTCCAGCATCTCGGGATCAG...CTCCTGTCTGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR CCA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTCATCCTTATATAGTGTaGCTTCATTGTAGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAHPYIV*LHCSAS
Trigger: TGAGGCGCTACAATGAAGCCACACTATATAAGGATG...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAACCTGGGATGACTGTGTaGAAGGCTCCTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKPGMTV*KAPLLE
Trigger: CTCAAGAAGAGGAGCCTTCCACACAGTCATCCCAGG...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCGGGGCAGCAACTGCCTaGGATGACTGTGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPGAATA*DDCVEG
Trigger: GCCTTCCACACAGTCATCCCAGGCAGTTGCTGCCCC...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAACCTGGAGGCAACGTGTaGAGCAGAAAGAGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKPGGNV*SRKRSR
Trigger: TCGACTTCTCTTTCTGCTCCACACGTTGCCTCCAGG...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCGAAGGCTCCTCTTCTTaGGTTTGCTGGAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIEGSSS*VCWRRV
Trigger: GACTCTTCTCCAGCAAACTCAAGAAGAGGAGCCTTC...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAAGAAGGCTCCTCTTCTTaGGTTTGCTGGAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKEGSSS*VCWRRV
Trigger: GACTCTTCTCCAGCAAACTCAAGAAGAGGAGCCTTC...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCTTCCAGAGCTCTGGCTaGCCAGGGGCTTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFAFQSSG*PGALAS
Trigger: TGAGGCCAAAGCCCCTGGTCAGCCAGAGCTCTGGAA...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCTGGATTCTTCTCCATaGACCTTCGGAACTCATTAC +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPLDSSP*TFGTHY
Trigger: GTAATGAGTTCCGAAGGTTCATGGAGAAGAATCCAG...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTCTCCTGTGGAGCTCTaGTTTTCAAAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIISPVEL*FSKSRA
Trigger: TGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGA...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR GCA 90 bp TCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATGAAGCCCCTGGGCTGTaGCCCGCTTGGCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: SLPNFIVIKIPETVPAPHEAPGL*PAWPEP
Trigger: CGGTTCGGGCCAAGCGGGGCACAGCCCAGGGGCTTC...ATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCCCCCCTTTGCAGGGGTaGTCCCTTGCCTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPPPLQG*SLASKE
Trigger: TTCTTTGGAGGCAAGGGAGCACCCCTGCAAAGGGGG...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
52% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCGGAGATTCCTCATTCTaGCCCAGCGCTTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIGDSSF*PSASFS
Trigger: TGAAAAGGAAGCGCTGGGGCAGAATGAGGAATCTCC...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCTTCCAGCTGCAGCTaGTGCATGCAGGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKSSSCS*CMQESK
Trigger: TTTACTCTCCTGCATGCAGCAGCTGCAGCTGGAAGA...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCAGTGGGGTCAGCACCTaGTTCCAGCAGCAGACGAAC +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPSGVST*FQQQTN
Trigger: GTTCGTCTGCTGCTGGAAGCAGGTGCTGACCCCACT...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTGTTCCCTCTGTTCTTaGTGGTTCTGGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIICSLCS*WFWKVW
Trigger: CCAGACCTTCCAGAACCACCAAGAACAGAGGGAACA...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCCAGTTCTGCCTCTTCTaGGGGATCCTGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPQFCLF*GILMRA
Trigger: GGCCCTCATCAGGATCCCCCAGAAGAGGCAGAACTG...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCATAGACATGCAAAGTaGTCAGCTTATGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: APHTSSPVFALVPECPSPHRHAK*SAYGAH
Trigger: GTGTGCTCCATAAGCTGACCACTTTGCATGTCTATG...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCGCTGACCAGGGGCTTTaGCCTCATCCAGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFAADQGL*PHPAKG
Trigger: GCCCTTTGCTGGATGAGGCCAAAGCCCCTGGTCAGC...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCGAGAGTCCTGCACAGTaGGGTCAGCACCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPESPAQ*GQHLLP
Trigger: TGGAAGCAGGTGCTGACCCCACTGTGCAGGACTCTC...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAACATTTCTGGTGTCAATaGTCCTGGCACCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKHFWCQ*SWHLSL
Trigger: AAGGCTCAGGTGCCAGGACCATTGACACCAGAAATG...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAACTCATTACGTGTTaGTTTGTCAGCCGCAACAGT +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPELITC*FVSRNS
Trigger: ACTGTTGCGGCTGACAAATCAACACGTAATGAGTTC...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAAAGTCCTCAGGTCGATTaGCGGATTTCTGCAACACAA +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKSPQVD*RISATQ
Trigger: TTGTGTTGCAGAAATCCGGCAATCGACCTGAGGACT...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATTGTCCTTGAGACGTTaGTTTAGGTTAAACCGATGC +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPLSLRR*FRLNRC
Trigger: GCATCGGTTTAACCTAAAGCAACGTCTCAAGGACAA...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR GCA 90 bp TGGAAAGATCTCCTGTGGAGCTCTGCTTTTCAAAGTCCAGGGCAGACAGGAGAGTCTCCTGTGGAGCTCTaGTTTTCAAAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WKDLLWSSAFQSPGQTGESPVEL*FSKSRA
Trigger: TGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGA...CTCTCCTGTCTGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR GCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTCCCGATCCAGTGTCTaGAAGTCCTCCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPSRSSV*KSSSLA
Trigger: AGCCAGTGAGGAGGACTTGCAGACACTGGATCGGGA...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTGGAGATTCCTCATTCTaGCCCAGCGCTTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSGDSSF*PSASFS
Trigger: TGAAAAGGAAGCGCTGGGGCAGAATGAGGAATCTCC...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCCTTCTGATCCCGAGATaGTGGAAAGATCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIILLIPR*WKDLQT
Trigger: CGTTTGGAGATCTTTCCAGCATCTCGGGATCAGAAG...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409849.5
CDS-3UTR CCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCCTGGAGCCGGCGACATaGCTGAGCAGAAATTATTTA +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIILEPAT*LSRNYL
Trigger: TAAATAATTTCTGCTCAGCCATGTCGCCGGCTCCAG...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATGGAAAGATCTCCTGTaGAGCTCTGCTTTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPWKDLL*SSAFQS
Trigger: ACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCA...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCGCACCACGCAGTCTCTaGGACCTCTACTTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPAPRSL*DLYFAG
Trigger: ACCTGCAAAGTAGAGGTCCCAGAGACTGCGTGGTGC...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTAGGTGGGTCTGCGGGTaGCGAGGGGGATATCCCAAA +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFRWVCG*RGGYPK
Trigger: TTTGGGATATCCCCCTCGCCACCCGCAGACCCACCT...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAAAAAGTGGTCAGCTTATaGAGCACACGCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKKVVSL*STRCSS
Trigger: AGAGCTACAGCGTGTGCTCCATAAGCTGACCACTTT...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCCATAGACATGCAAAGTaGTCAGCTTATGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPHRHAK*SAYGAH
Trigger: GTGTGCTCCATAAGCTGACCACTTTGCATGTCTATG...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp AGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCAGAACTCATTACGTGTTaGTTTGTCAGCCGCAACAGT +
Preference number: 4 (lower is better)
Translates to: SPVFALVPECPSPPSSKSELITC*FVSRNS
Trigger: ACTGTTGCGGCTGACAAATCAACACGTAATGAGTTC...TGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCGAACTCATTACGTGTTaGTTTGTCAGCCGCAACAGT +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIELITC*FVSRNS
Trigger: ACTGTTGCGGCTGACAAATCAACACGTAATGAGTTC...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCTCCCGATCCAGTGTCTaGAAGTCCTCCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFASRSSV*KSSSLA
Trigger: AGCCAGTGAGGAGGACTTGCAGACACTGGATCGGGA...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp AGTACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGAAGCCCCTGGGCTGTaGCCCGCTTGGCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: STHSLPNFIVIKIPETVPEAPGL*PAWPEP
Trigger: CGGTTCGGGCCAAGCGGGGCACAGCCCAGGGGCTTC...TGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCGAGTATTGACGATTaGAGAGTCAGGGATTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSPVFALVPECPSPPSSKSSIDD*RVRDWR
Trigger: TCTCCAATCCCTGACTCTGCAATCGTCAATACTCGA...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTCAGTTCTGCCTCTTCTaGGGGATCCTGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFQFCLF*GILMRA
Trigger: GGCCCTCATCAGGATCCCCCAGAAGAGGCAGAACTG...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGTAATCGTAGGCATCTaGATTCTTCTCCATGAACCT +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPVIVGI*ILLHEP
Trigger: AGGTTCATGGAGAAGAATCCAGATGCCTACGATTAC...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAAACGTCCCGGGAGCTaGGCGGCTCGCAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSKRPGS*AARKSS
Trigger: TGAGGACTTGCGAGCCGCTCAGCTCCCGGGACGTTT...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR TCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCAGCAGCGTCGAGTATTaGCGATTGCAGAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFASSVEY*RLQSQG
Trigger: TCCCTGACTCTGCAATCGTCAATACTCGACGCTGCT...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTCTTCCAGCTGCAGCTaGTGCATGCAGGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPSSSCS*CMQESK
Trigger: TTTACTCTCCTGCATGCAGCAGCTGCAGCTGGAAGA...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTTCCTGCTGCCTCTGCTaGTGTTCCTCCCGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSSCCLC*CSSRCR
Trigger: GCGGCAACGGGAGGAACAGCAGCAGAGGCAGCAGGA...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTCAGGCCTTGGAGGGATaGCCCACAACTCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSQALEG*PTTPAA
Trigger: CGCTGCTGGAGTTGTGGGGCATCCCTCCAAGGCCTG...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CTGAGTCTTCTGATCCCGAGATGCTGGAAAGATCTCCTGTGGAGCTCTGCTTTTCTGGAGCCGGCGACATaGCTGAGCAGAAATTATTTA +
Preference number: 4 (lower is better)
Translates to: LSLLIPRCWKDLLWSSAFLEPAT*LSRNYL
Trigger: TAAATAATTTCTGCTCAGCCATGTCGCCGGCTCCAG...AAAAGCAGAGCTCCACAGGAGATCTTTCCAGCATCTCGGGATCAGAAGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR CCA 90 bp CCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCCATCCTTATATAGTGTaGCTTCATTGTAGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: PCLCPSSRVSFTPIFQIIHPYIV*LHCSAS
Trigger: TGAGGCGCTACAATGAAGCCACACTATATAAGGATG...GATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp AGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCACATCCTTATATAGTGTaGCTTCATTGTAGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: SPVFALVPECPSPPSSKSHPYIV*LHCSAS
Trigger: TGAGGCGCTACAATGAAGCCACACTATATAAGGATG...TGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTCCGTGCCTCCATTTCTaGTGTCAATGGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFPCLHF*CQWSWH
Trigger: GTGCCAGGACCATTGACACCAGAAATGGAGGCACGG...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
3UTR CAA 72 bp TTTTCAAAGTCCAGGGCAGACAGGAGAGGCTTGTCCTaGAGACGTTGCTTTAGGTTAAACCGATGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: FSKSRADRRGLS*RRCFRLNRCQS
Trigger: TGACTGGCATCGGTTTAACCTAAAGCAACGTCTCAAGGACAAGCCTCTCCTGTCTGCCCTGGACTTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR TCA 90 bp AGTACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCCCAGCTGCAGCCATaGGCACCACGCAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: STHSLPNFIVIKIPETVPAQLQP*APRSLW
Trigger: CCAGAGACTGCGTGGTGCTCATGGCTGCAGCTGGGC...TGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR TCA 90 bp TCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATCAGCAGACGAACCACTaGGCCTCTTCCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPNFIVIKIPETVPAPHQQTNH*ASSSCS
Trigger: GCTGCAGCTGGAAGAGGCTCAGTGGTTCGTCTGCTG...ATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTTTGTCCTTGAGACGTTaGTTTAGGTTAAACCGATGC +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSLSLRR*FRLNRC
Trigger: GCATCGGTTTAACCTAAAGCAACGTCTCAAGGACAA...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR GCA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCACTTCCTTTTCATCCCTaGAGATCTTTCTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: PHTSSPVFALVPECPSPPLPFHP*RSFLFL
Trigger: AAGAAATAAGAAAGATCTGCAGGGATGAAAAGGAAG...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp ACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTTCCTGCTGCCTCTGCTaGTGTTCCTCCCGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: THSLPNFIVIKIPETVPASCCLC*CSSRCR
Trigger: GCGGCAACGGGAGGAACAGCAGCAGAGGCAGCAGGA...AGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCCTGGAGCCGGCGACATaGCTGAGCAGAAATTATTTA +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPLEPAT*LSRNYL
Trigger: TAAATAATTTCTGCTCAGCCATGTCGCCGGCTCCAG...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCTGTTCCCTCTGTTCTTaGTGGTTCTGGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFACSLCS*WFWKVW
Trigger: CCAGACCTTCCAGAACCACCAAGAACAGAGGGAACA...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTCCTGGGATGACTGTGTaGAAGGCTCCTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFPGMTV*KAPLLE
Trigger: CTCAAGAAGAGGAGCCTTCCACACAGTCATCCCAGG...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTGTAATCGTAGGCATCTaGATTCTTCTCCATGAACCT +
Preference number: 4 (lower is better)
Translates to: PVFALVPECPSPPSSKSSVIVGI*ILLHEP
Trigger: AGGTTCATGGAGAAGAATCCAGATGCCTACGATTAC...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCTGGTGTCAATGGTCCTaGCACCTGAGCCTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFAWCQWS*HLSLVV
Trigger: TACAACAAGGCTCAGGTGCCAGGACCATTGACACCA...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCATTTCTGGTGTCAATaGTCCTGGCACCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFAHFWCQ*SWHLSL
Trigger: AAGGCTCAGGTGCCAGGACCATTGACACCAGAAATG...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGTTTTCCAGTGTGTCTaGGGTGAGTGCAGTCTGACT +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFVFQCV*GECSLT
Trigger: AGTCAGACTGCACTCACCTCAGACACACTGGAAAAC...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAACCTAGGGCTGCTGTaGATGTGCCCTCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSNLGLL*MCPLRS
Trigger: GGACCTGAGAGGGCACATTCACAGCAGCCCTAGGTT...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTCGATTGCCGGATTTCTaGAACACAACAATCCCCGTC +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFRLPDF*NTTIPV
Trigger: GACGGGGATTGTTGTGTTGCAGAAATCCGGCAATCG...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp AGATGCTGGAAAGATCTCCTGTGGAGCTCTGCTTTTCAAAGTCCAGGGCAGACATTGTCCTTGAGACGTTaGTTTAGGTTAAACCGATGC +
Preference number: 4 (lower is better)
Translates to: RCWKDLLWSSAFQSPGQTLSLRR*FRLNRC
Trigger: GCATCGGTTTAACCTAAAGCAACGTCTCAAGGACAA...TGTCTGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCAGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR GCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTTCTCCTGTGGAGCTCTaGTTTTCAAAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFSPVEL*FSKSRA
Trigger: TGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGA...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR GCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTCTTCTGATCCCGAGATaGTGGAAAGATCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFLLIPR*WKDLLW
Trigger: CCACAGGAGATCTTTCCAGCATCTCGGGATCAGAAG...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR GCA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCCTTCCTTTTCATCCCTaGAGATCTTTCTTATTTCTT +
Preference number: 4 (lower is better)
Translates to: PETVPAPHTSSPVFALVPLPFHP*RSFLFL
Trigger: AAGAAATAAGAAAGATCTGCAGGGATGAAAAGGAAG...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATAGTGGGGTCAGCACCTaGTTCCAGCAGCAGACGAAC +
Preference number: 4 (lower is better)
Translates to: SLPNFIVIKIPETVPAPHSGVST*FQQQTN
Trigger: GTTCGTCTGCTGCTGGAAGCAGGTGCTGACCCCACT...ATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTCGAGTATTGACGATTaGAGAGTCAGGGATTGGAGA +
Preference number: 4 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPSSIDD*RVRDWR
Trigger: TCTCCAATCCCTGACTCTGCAATCGTCAATACTCGA...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp AGATGCTGGAAAGATCTCCTGTGGAGCTCTGCTTTTCAAAGTCCAGGGCAGACATGGAAAGATCTCCTGTaGAGCTCTGCTTTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RCWKDLLWSSAFQSPGQTWKDLL*SSAFQS
Trigger: ACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCA...TGTCTGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCAGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR CCA 90 bp TCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACACGCTGTAGCTCTTaGAAGGTGGGTCTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: SLPNFIVIKIPETVPAPHTRCSS*KVGLRV
Trigger: CACCCGCAGACCCACCTTCCAAGAGCTACAGCGTGT...ATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCAAAGTGGTCAGCTTATaGAGCACACGCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFAKVVSL*STRCSS
Trigger: AGAGCTACAGCGTGTGCTCCATAAGCTGACCACTTT...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTACCCTGAACCCTGTTTaGGAGATTCCTCATTCTGCC +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFTLNPV*EIPHSA
Trigger: GGCAGAATGAGGAATCTCCCAAACAGGGTTCAGGGT...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTGGGCTGGGAGCTAGCTaGAGCTTTAGCACTCCAACA +
Preference number: 4 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSGLGAS*SFSTPT
Trigger: TGTTGGAGTGCTAAAGCTGCAGCTAGCTCCCAGCCC...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp TCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATTCCAGCTGCAGCTGCTaGATGCAGGAGAGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: SLPNFIVIKIPETVPAPHSSCSC*MQESKA
Trigger: GGCTTTACTCTCCTGCATGCAGCAGCTGCAGCTGGA...ATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp AGTACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAAGCGAGTCGGCGCTCTaGAGCCAGAGCTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: STHSLPNFIVIKIPETVPSESAL*SQSSLL
Trigger: GAGAAGAGAGCTCTGGCTGCAGAGCGCCGACTCGCT...TGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCTCGAGTATTGACGATTaGAGAGTCAGGGATTGGAGA +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFASSIDD*RVRDWR
Trigger: TCTCCAATCCCTGACTCTGCAATCGTCAATACTCGA...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp TCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATGCACCACGCAGTCTCTaGGACCTCTACTTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLPNFIVIKIPETVPAPHAPRSL*DLYFAG
Trigger: ACCTGCAAAGTAGAGGTCCCAGAGACTGCGTGGTGC...ATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CCA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTTGTAGCGCCTCAGGTTaGCTCCAGCAGAGTGTGATG +
Preference number: 4 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSCSASG*LQQSVM
Trigger: CATCACACTCTGCTGGAGCCAACCTGAGGCGCTACA...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp ACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTGAGAGTCCTGCACAGTaGGGTCAGCACCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: THSLPNFIVIKIPETVPAESPAQ*GQHLLP
Trigger: TGGAAGCAGGTGCTGACCCCACTGTGCAGGACTCTC...AGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR TCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTCTGGATTCTTCTCCATaGACCTTCGGAACTCATTAC +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFLDSSP*TFGTHY
Trigger: GTAATGAGTTCCGAAGGTTCATGGAGAAGAATCCAG...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR GCA 90 bp ACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTGCAGGGGTGCTCCCTTaGCTCCAAAGAACAAAGACC +
Preference number: 4 (lower is better)
Translates to: THSLPNFIVIKIPETVPAAGVLP*LQRTKT
Trigger: GGTCTTTGTTCTTTGGAGGCAAGGGAGCACCCCTGC...AGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp AGTACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTGCAGCTGCTGCATaGAGGAGAGTAAAGCCACCG +
Preference number: 4 (lower is better)
Translates to: STHSLPNFIVIKIPETVPAAAAA*RRVKPP
Trigger: CGGTGGCTTTACTCTCCTGCATGCAGCAGCTGCAGC...TGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CCA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTCATAGACATGCAAAGTaGTCAGCTTATGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFHRHAK*SAYGAH
Trigger: GTGTGCTCCATAAGCTGACCACTTTGCATGTCTATG...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCGTAATCGTAGGCATCTaGATTCTTCTCCATGAACCT +
Preference number: 4 (lower is better)
Translates to: IKIPETVPAPHTSSPVFAVIVGI*ILLHEP
Trigger: AGGTTCATGGAGAAGAATCCAGATGCCTACGATTAC...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CCA 90 bp AGTACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAAAGGGAGTCAGGCCTTaGAGGGATGCCCCACAACTC +
Preference number: 4 (lower is better)
Translates to: STHSLPNFIVIKIPETVPKGVRP*RDAPQL
Trigger: GAGTTGTGGGGCATCCCTCCAAGGCCTGACTCCCTT...TGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CCA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTCCTGGAGGCAACGTGTaGAGCAGAAAGAGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSPGGNV*SRKRSR
Trigger: TCGACTTCTCTTTCTGCTCCACACGTTGCCTCCAGG...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp AGTACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCATTCTCCCTCCGACCCTaGACCCTGTTTGGGAGATTC +
Preference number: 4 (lower is better)
Translates to: STHSLPNFIVIKIPETVPFSLRP*TLFGRF
Trigger: GAATCTCCCAAACAGGGTTCAGGGTCGGAGGGAGAA...TGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR TCA 90 bp TCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATGAAGGCTCCTCTTCTTaGGTTTGCTGGAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: SLPNFIVIKIPETVPAPHEGSSS*VCWRRV
Trigger: GACTCTTCTCCAGCAAACTCAAGAAGAGGAGCCTTC...ATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR TCA 90 bp ACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTAGCAGCGTCGAGTATTaGCGATTGCAGAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: THSLPNFIVIKIPETVPASSVEY*RLQSQG
Trigger: TCCCTGACTCTGCAATCGTCAATACTCGACGCTGCT...AGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR GCA 90 bp AGTACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCACCGTGTAGCCTGCCGTaGCTCCATTTCTGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: STHSLPNFIVIKIPETVPPCSLP*LHFWCQ
Trigger: TTGACACCAGAAATGGAGGCACGGCAGGCTACACGG...TGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CCA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTACCCTGAACCCTGTTTaGGAGATTCCTCATTCTGCC +
Preference number: 4 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSTLNPV*EIPHSA
Trigger: GGCAGAATGAGGAATCTCCCAAACAGGGTTCAGGGT...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR TCA 90 bp AGTACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAAGCAGCGTCGAGTATTaGCGATTGCAGAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: STHSLPNFIVIKIPETVPSSVEY*RLQSQG
Trigger: TCCCTGACTCTGCAATCGTCAATACTCGACGCTGCT...TGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CCA 90 bp ACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCATTTCTGGTGTCAATaGTCCTGGCACCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: THSLPNFIVIKIPETVPAHFWCQ*SWHLSL
Trigger: AAGGCTCAGGTGCCAGGACCATTGACACCAGAAATG...AGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CCA 90 bp ACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCTGATCCCGAGATGCTaGAAAGATCTCCAAACGTCC +
Preference number: 4 (lower is better)
Translates to: THSLPNFIVIKIPETVPALIPRC*KDLQTS
Trigger: GGACGTTTGGAGATCTTTCCAGCATCTCGGGATCAG...AGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409849.5
CDS-3UTR CCA 90 bp AGTACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAACCCTGAACCCTGTTTaGGAGATTCCTCATTCTGCC +
Preference number: 4 (lower is better)
Translates to: STHSLPNFIVIKIPETVPTLNPV*EIPHSA
Trigger: GGCAGAATGAGGAATCTCCCAAACAGGGTTCAGGGT...TGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CCA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTTGGAAAGATCTCCTGTaGAGCTCTGCTTTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSWKDLL*SSAFQS
Trigger: ACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCA...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR TCA 90 bp AGTACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCACTGGATTCTTCTCCATaGACCTTCGGAACTCATTAC +
Preference number: 4 (lower is better)
Translates to: STHSLPNFIVIKIPETVPLDSSP*TFGTHY
Trigger: GTAATGAGTTCCGAAGGTTCATGGAGAAGAATCCAG...TGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS TCA 90 bp CGGGCCAGAGCCTCCCCAGGCGCGTGGCTCACCAGGCTCAGGCCCTaGAAGACCGGAGCATCCGCGCTGAGGTCAAACAGGGAGATCGAC +
Preference number: 5 (lower is better)
Translates to: RARASPGAWLTRLRP*KTGASALRSNREID
Trigger: GTCGATCTCCCTGTTTGACCTCAGCGCGGATGCTCCGGTCTTTCAGGGCCTGAGCCTGGTGAGCCACGCGCCTGGGGAGGCTCTGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323348.10
ENST00000410034.7
ENST00000435521.5
ENST00000436226.1
ENST00000447157.5
ENST00000464763.5
ENST00000486203.5
CDS GCA 90 bp CGCCGCTGCTCTTCTCGTTCACGCTCCTCCTGCTCCTGCTGCCTCTaGTGCTGTTCCTCCCGTTGCCGCCGGGCTGCCTTCTGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: RRCSSRSRSSCSCCL*CCSSRCRRAAFCSL
Trigger: AAGGGAGCAGAAGGCAGCCCGGCGGCAACGGGAGGAACAGCAGCAGAGGCAGCAGGAGCAGGAGGAGCGTGAACGAGAAGAGCAGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS TCA 90 bp CGTGGCTCACCAGGCTCAGGCCCTGAAAGACCGGAGCATCCGCGCTaGGGTCAAACAGGGAGATCGACGCAGGAGCCGGGGCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: RGSPGSGPERPEHPR*GQTGRSTQEPGLHL
Trigger: CAGATGCAGCCCCGGCTCCTGCGTCGATCTCCCTGTTTGACCTCAGCGCGGATGCTCCGGTCTTTCAGGGCCTGAGCCTGGTGAGCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323348.10
ENST00000410034.7
ENST00000435521.5
ENST00000436226.1
ENST00000447157.5
ENST00000464763.5
ENST00000486203.5
CDS TCA 90 bp TCCCCTGAGCCAGGCTCAGGCCCTGAAAGACCGGAGCATCCGCGCTaGGGTCAAACAGGGAGATCGACGCAGGAGCCGGGGCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: SPEPGSGPERPEHPR*GQTGRSTQEPGLHL
Trigger: CAGATGCAGCCCCGGCTCCTGCGTCGATCTCCCTGTTTGACCTCAGCGCGGATGCTCCGGTCTTTCAGGGCCTGAGCCTGGCTCAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416565.1
ENST00000463792.5
ENST00000477479.5
ENST00000491181.5
CDS GCA 90 bp CTGCTCCTGCTGCCTCTGCTGCTGTTCCTCCCGTTGCCGCCGGGCTaGCTTCTGCTCCCTTTTCCGTGTAGCCTGCCGTGCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: LLLLPLLLFLPLPPG*LLLPFPCSLPCLHF
Trigger: GAAATGGAGGCACGGCAGGCTACACGGAAAAGGGAGCAGAAGGCAGCCCGGCGGCAACGGGAGGAACAGCAGCAGAGGCAGCAGGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS GCA 90 bp TGCTGCCTCTGCTGCTGTTCCTCCCGTTGCCGCCGGGCTGCCTTCTaGTCCCTTTTCCGTGTAGCCTGCCGTGCCTCCATTTCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: CCLCCCSSRCRRAAF*SLFRVACRASISGV
Trigger: GACACCAGAAATGGAGGCACGGCAGGCTACACGGAAAAGGGAGCAGAAGGCAGCCCGGCGGCAACGGGAGGAACAGCAGCAGAGGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS TCA 90 bp TCTCCAGCTCGGCAAGCAGCAAGCAGTGCATTCCAGAGCTCTGGCTaGCCAGGGGCTTTGGCCTCATCCAGCAAAGGGCCCAAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: SPARQAASSAFQSSG*PGALASSSKGPKGA
Trigger: TGCCCCCTTGGGCCCTTTGCTGGATGAGGCCAAAGCCCCTGGTCAGCCAGAGCTCTGGAATGCACTGCTTGCTGCTTGCCGAGCTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS TCA 90 bp AATGTTCCCTCAGGCTCAGGCCCTGAAAGACCGGAGCATCCGCGCTaGGGTCAAACAGGGAGATCGACGCAGGAGCCGGGGCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: NVPSGSGPERPEHPR*GQTGRSTQEPGLHL
Trigger: CAGATGCAGCCCCGGCTCCTGCGTCGATCTCCCTGTTTGACCTCAGCGCGGATGCTCCGGTCTTTCAGGGCCTGAGCCTGAGGGAACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461731.5
ENST00000474225.5
CDS TCA 90 bp TGTAAGGAGCCCTGTCACGTTTCACACGAAACCTTCCAGGATACCTaGACAGGAAGTACGCGGAGCCCGGGCCAGAGCCTCCCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: CKEPCHVSHETFQDT*TGSTRSPGQSLPRR
Trigger: GCGCCTGGGGAGGCTCTGGCCCGGGCTCCGCGTACTTCCTGTTCAGGTATCCTGGAAGGTTTCGTGTGAAACGTGACAGGGCTCCTTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464763.5
CDS GCA 90 bp AGCAGCAGACGAACCACTGAGCCTCTTCCAGCTGCAGCTGCTGCATaGAGGAGAGTAAAGCCACCGGAGCCCAAGGGGGCACTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SSRRTTEPLPAAAAA*RRVKPPEPKGALSR
Trigger: TCTGCTCAGTGCCCCCTTGGGCTCCGGTGGCTTTACTCTCCTGCATGCAGCAGCTGCAGCTGGAAGAGGCTCAGTGGTTCGTCTGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
ENST00000483188.1
CDS CCA 90 bp GGGAGATCGACGCAGGAGCCGGGGCTGCATCTGGAGCCGGCGACATaGCTGAGCAGAAATTATTTAGCAGCAGCTCCAAACGTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: GRSTQEPGLHLEPAT*LSRNYLAAAPNVPG
Trigger: TCCCGGGACGTTTGGAGCTGCTGCTAAATAATTTCTGCTCAGCCATGTCGCCGGCTCCAGATGCAGCCCCGGCTCCTGCGTCGATCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323348.10
ENST00000435521.5
ENST00000461731.5
ENST00000463792.5
ENST00000464763.5
ENST00000474225.5
ENST00000477479.5
ENST00000486203.5
CDS CCA 90 bp TTGACGATTGCAGAGTCAGGGATTGGAGAGGTAGGGGCTCCCAACTaGGCAGCGAGTCGGCGCTCTGCAGCCAGAGCTCTCTTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: LTIAESGIGEVGAPN*AASRRSAARALFSR
Trigger: CCGAGAGAAGAGAGCTCTGGCTGCAGAGCGCCGACTCGCTGCCCAGTTGGGAGCCCCTACCTCTCCAATCCCTGACTCTGCAATCGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS CCA 90 bp GGGAGATCGACGCAGGAGCCGGGGCTGCATCTGGAGCCGGCGACATaGCTGAGCAGAAATTATTTAGCAGCAGCTCCCATGCGACCAGCA +
Preference number: 5 (lower is better)
Translates to: GRSTQEPGLHLEPAT*LSRNYLAAAPMRPA
Trigger: TGCTGGTCGCATGGGAGCTGCTGCTAAATAATTTCTGCTCAGCCATGTCGCCGGCTCCAGATGCAGCCCCGGCTCCTGCGTCGATCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410034.7
CDS CCA 90 bp ATCCCGCACCCCATACCGAGTATTGACGATTGCAGAGTCAGGGATTaGAGAGGTAGGGGCTCCCAACTGGGCAGCGAGTCGGCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: IPHPIPSIDDCRVRD*RGRGSQLGSESALC
Trigger: GCAGAGCGCCGACTCGCTGCCCAGTTGGGAGCCCCTACCTCTCCAATCCCTGACTCTGCAATCGTCAATACTCGGTATGGGGTGCGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS TCA 90 bp CTGCACAGTGGGGTCAGCACCTGCTTCCAGCAGCAGACGAACCACTaGGCCTCTTCCAGCTGCAGCTGCTGCATGCAGGAGAGTAAAGCC +
Preference number: 5 (lower is better)
Translates to: LHSGVSTCFQQQTNH*ASSSCSCCMQESKA
Trigger: GGCTTTACTCTCCTGCATGCAGCAGCTGCAGCTGGAAGAGGCTCAGTGGTTCGTCTGCTGCTGGAAGCAGGTGCTGACCCCACTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
ENST00000483188.1
CDS GCA 90 bp CCAAACGTCCCGGGAGCTGAGCGGCTCGCAAGTCCTCAGGTCGATTaGCGGATTTCTGCAACACAACAATCCCCGTCACTACGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PNVPGAERLASPQVD*RISATQQSPSLRSS
Trigger: GCTGCTCCGTAGTGACGGGGATTGTTGTGTTGCAGAAATCCGGCAATCGACCTGAGGACTTGCGAGCCGCTCAGCTCCCGGGACGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000453432.5
ENST00000461731.5
ENST00000464763.5
ENST00000467884.5
ENST00000474225.5
ENST00000475202.5
CDS GCA 90 bp TCCACCCACTCCCTCATCCCGCACCCCATACCGAGTATTGACGATTaGAGAGTCAGGGATTGGAGAGGTAGGGGCTCCCAACTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: STHSLIPHPIPSIDD*RVRDWRGRGSQLGS
Trigger: GCTGCCCAGTTGGGAGCCCCTACCTCTCCAATCCCTGACTCTGCAATCGTCAATACTCGGTATGGGGTGCGGGATGAGGGAGTGGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS CCA 90 bp GCAAAGTGGTCAGCTTATGGAGCACACGCTGTAGCTCTTGGAAGGTaGGTCTGCGGGTGGCGAGGGGGATATCCCAAAGTCGGGGATCCC +
Preference number: 5 (lower is better)
Translates to: AKWSAYGAHAVALGR*VCGWRGGYPKVGDP
Trigger: GGGATCCCCGACTTTGGGATATCCCCCTCGCCACCCGCAGACCCACCTTCCAAGAGCTACAGCGTGTGCTCCATAAGCTGACCACTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000467884.5
ENST00000468387.1
ENST00000477479.5
ENST00000496346.5
CDS CCA 90 bp AACATCTCCAGCTCGGCAAGCAGCAAGCAGTGCATTCCAGAGCTCTaGCTGACCAGGGGCTTTGGCCTCATCCAGCAAAGGGCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: NISSSASSKQCIPEL*LTRGFGLIQQRAQG
Trigger: CCCTTGGGCCCTTTGCTGGATGAGGCCAAAGCCCCTGGTCAGCCAGAGCTCTGGAATGCACTGCTTGCTGCTTGCCGAGCTGGAGATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS CCA 90 bp ACAACTCCAGCAGCGTCGAGTATTGACGATTGCAGAGTCAGGGATTaGAGAGGTAGGGGCTCCCAACTGGGCAGCGAGTCGGCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: TTPAASSIDDCRVRD*RGRGSQLGSESALC
Trigger: GCAGAGCGCCGACTCGCTGCCCAGTTGGGAGCCCCTACCTCTCCAATCCCTGACTCTGCAATCGTCAATACTCGACGCTGCTGGAGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS-3UTR CAA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTGAGCACGCAACAGTATaGTACCAGCCTCCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAEHATV*YQPPPA
Trigger: CGCTGGAGGAGGCTGGTACAATACTGTTGCGTGCTC...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS CCA 90 bp GGGAGATCGACGCAGGAGCCGGGGCTGCATCTGGAGCCGGCGACATaGCTGAGCAGAAATTATTTAGCAGCAGCTCCTAGCCGAACTTTC +
Preference number: 5 (lower is better)
Translates to: GRSTQEPGLHLEPAT*LSRNYLAAAPSRTF
Trigger: GAAAGTTCGGCTAGGAGCTGCTGCTAAATAATTTCTGCTCAGCCATGTCGCCGGCTCCAGATGCAGCCCCGGCTCCTGCGTCGATCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447157.5
CDS GCA 90 bp CTGAGCAGAGACAGAACTCTAGGGTCTGCAGGGCTGGGAGCTAGCTaGAGCTTTAGCACTCCAACATCTCCAGCTCGGCAAGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: LSRDRTLGSAGLGAS*SFSTPTSPARQAAS
Trigger: GCTTGCTGCTTGCCGAGCTGGAGATGTTGGAGTGCTAAAGCTGCAGCTAGCTCCCAGCCCTGCAGACCCTAGAGTTCTGTCTCTGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS CCA 90 bp CCAGCAAAGGGCCCAAGGGGGCAGCAACTGCCTGGGATGACTGTGTaGAAGGCTCCTCTTCTTGAGTTTGCTGGAGAAGAGTCCGATGTG +
Preference number: 5 (lower is better)
Translates to: PAKGPRGQQLPGMTV*KAPLLEFAGEESDV
Trigger: CACATCGGACTCTTCTCCAGCAAACTCAAGAAGAGGAGCCTTCCACACAGTCATCCCAGGCAGTTGCTGCCCCCTTGGGCCCTTTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS CCA 90 bp AAGAGGGCCTCCCTGCCTGACGGCGATGATCCTGGAGGCAACGTGTaGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAGTCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: KRASLPDGDDPGGNV*SRKRSRGSERESGL
Trigger: AAGGCCTGACTCCCTTTCACTACCTCGACTTCTCTTTCTGCTCCACACGTTGCCTCCAGGATCATCGCCGTCAGGCAGGGAGGCCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS-3UTR CAA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCGAGCACGCAACAGTATaGTACCAGCCTCCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: APHTSSPVFALVPECPSPEHATV*YQPPPA
Trigger: CGCTGGAGGAGGCTGGTACAATACTGTTGCGTGCTC...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CAA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTGACCCTGAACCCTGTTaGGGAGATTCCTCATTCTGC +
Preference number: 5 (lower is better)
Translates to: RAAVNVPSQVPELAPGRADPEPC*GDSSFC
Trigger: GCAGAATGAGGAATCTCCCAAACAGGGTTCAGGGTC...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS TCA 90 bp AGGGCTCCTGCAAACGAGATCCTACTGCTGCGTCTCCTGCCTGCCTaGCTTGGTTTCTCCTGCACCGCAAGACTTCTCGTCTCTCATCCT +
Preference number: 5 (lower is better)
Translates to: RAPANEILLLRLLPA*LGFSCTARLLVSHP
Trigger: AGGATGAGAGACGAGAAGTCTTGCGGTGCAGGAGAAACCAAGTCAGGCAGGCAGGAGACGCAGCAGTAGGATCTCGTTTGCAGGAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416565.1
ENST00000436226.1
CDS TCA 90 bp CAGGATCCACTCCATCCTTACCCCCATGCAGCACCCTCTCACCCTTaGAATATAGCACCAGCAAAGTGCCCAGCTGCAGCCATGAGCACC +
Preference number: 5 (lower is better)
Translates to: QDPLHPYPHAAPSHP*NIAPAKCPAAAMST
Trigger: GGTGCTCATGGCTGCAGCTGGGCACTTTGCTGGTGCTATATTTCAAGGGTGAGAGGGTGCTGCATGGGGGTAAGGATGGAGTGGATCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467884.5
ENST00000474225.5
ENST00000494886.1
CDS GCA 90 bp GCTGGTGCTCCCTGGCTAACAGGATCCACTCCATCCTTACCCCCATaGAGCACCCTCTCACCCTTGAAATATAGCACCAGCAAAGTGCCC +
Preference number: 5 (lower is better)
Translates to: AGAPWLTGSTPSLPP*STLSPLKYSTSKVP
Trigger: GGGCACTTTGCTGGTGCTATATTTCAAGGGTGAGAGGGTGCTGCATGGGGGTAAGGATGGAGTGGATCCTGTTAGCCAGGGAGCACCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467884.5
ENST00000474225.5
ENST00000494886.1
CDS GCA 90 bp CAGTATTGTACCAGCCTCCTCCAGCGCCTTAGCCCAGCTTGGCCCTaGCAGCAGGTCACGAACATCCTAGAGAAGAGAGTAACTCAGTCC +
Preference number: 5 (lower is better)
Translates to: QYCTSLLQRLSPAWP*QQVTNILEKRVTQS
Trigger: GGACTGAGTTACTCTCTTCTCTAGGATGTTCGTGACCTGCTGGCAGGGCCAAGCTGGGCTAAGGCGCTGGAGGAGGCTGGTACAATACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468387.1
CDS CCA 90 bp CACGAACATCCTTATATAGTGTGGCTTCATTGTAGCGCCTCAGGTTaGCTCCAGCAGAGTGTGATGGCCCACCTCGGGCATCCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: HEHPYIVWLHCSASG*LQQSVMAHLGHPEA
Trigger: GGCTTCGGGATGCCCGAGGTGGGCCATCACACTCTGCTGGAGCCAACCTGAGGCGCTACAATGAAGCCACACTATATAAGGATGTTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000467884.5
ENST00000477479.5
ENST00000494886.1
ENST00000496346.5
CDS-3UTR CAA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCTGCAGGGGTGCTCCCTaGCCTCCAAAGAACAAAGAC +
Preference number: 5 (lower is better)
Translates to: APHTSSPVFALVPECPSPCRGAP*PPKNKD
Trigger: GTCTTTGTTCTTTGGAGGCAAGGGAGCACCCCTGCA...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CAA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCAAAGGGAGTCAGGCCTaGGAGGGATGCCCCACAACT +
Preference number: 5 (lower is better)
Translates to: PETVPAPHTSSPVFALVPKGSQA*EGCPTT
Trigger: AGTTGTGGGGCATCCCTCCAAGGCCTGACTCCCTTT...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS GCA 90 bp AAACAGGGCTCCTGCAAACGAGATCCTACTGCTGCGTCTCCTGCCTaGCTGACTTGGTTTCTCCTGCACCGCAAGACTTCTCGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: KQGSCKRDPTAASPA*LTWFLLHRKTSRLS
Trigger: TGAGAGACGAGAAGTCTTGCGGTGCAGGAGAAACCAAGTCAGGCAGGCAGGAGACGCAGCAGTAGGATCTCGTTTGCAGGAGCCCTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416565.1
ENST00000436226.1
CDS CCA 90 bp ACGCAACAGTATTGTACCAGCCTCCTCCAGCGCCTTAGCCCAGCTTaGCCCTGCCAGCAGGTCACGAACATCCTAGAGAAGAGAGTAACT +
Preference number: 5 (lower is better)
Translates to: TQQYCTSLLQRLSPA*PCQQVTNILEKRVT
Trigger: AGTTACTCTCTTCTCTAGGATGTTCGTGACCTGCTGGCAGGGCCAAGCTGGGCTAAGGCGCTGGAGGAGGCTGGTACAATACTGTTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468387.1
CDS CCA 90 bp CTTAACTCACCTTATATAGTGTGGCTTCATTGTAGCGCCTCAGGTTaGCTCCAGCAGAGTGTGATGGCCCACCTCGGGCATCCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: LNSPYIVWLHCSASG*LQQSVMAHLGHPEA
Trigger: GGCTTCGGGATGCCCGAGGTGGGCCATCACACTCTGCTGGAGCCAACCTGAGGCGCTACAATGAAGCCACACTATATAAGGTGAGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474225.5
ENST00000490526.1
CDS-3UTR CAA 90 bp GCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCGCAGACAGGAGAGGCTaGTCCTTGAGACGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: APHTSSPVFALVPECPSPADRRG*SLRRCF
Trigger: AAAGCAACGTCTCAAGGACAAGCCTCTCCTGTCTGC...GGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CAA 90 bp AGGGCTGCTGTGAATGTGCCCTCTCAGGTCCCTGAGTTGGCCCCAGGTAGAGCTGGAACTCATTACGTGTaGATTTGTCAGCCGCAACAG +
Preference number: 5 (lower is better)
Translates to: RAAVNVPSQVPELAPGRAGTHYV*ICQPQQ
Trigger: CTGTTGCGGCTGACAAATCAACACGTAATGAGTTCC...AGCTCTACCTGGGGCCAACTCAGGGACCTGAGAGGGCACATTCACAGCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CAA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAAAAAGGGAGTCAGGCCTaGGAGGGATGCCCCACAACT +
Preference number: 5 (lower is better)
Translates to: SSPVFALVPECPSPPSSKKGSQA*EGCPTT
Trigger: AGTTGTGGGGCATCCCTCCAAGGCCTGACTCCCTTT...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS TCA 90 bp CTCCTGCACCGCAAGACTTCTCGTCTCTCATCCTGCTACCAACTGTaGGATGAATACCTTGGCCCCCGTCCACTTTCTCAAACCCCCAGT +
Preference number: 5 (lower is better)
Translates to: LLHRKTSRLSSCYQL*DEYLGPRPLSQTPS
Trigger: ACTGGGGGTTTGAGAAAGTGGACGGGGGCCAAGGTATTCATCTCACAGTTGGTAGCAGGATGAGAGACGAGAAGTCTTGCGGTGCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000416565.1
ENST00000436226.1
CDS GCA 90 bp GAAAGAGAAGTCGAGGTAGTGAAAGGGAGTCAGGCCTTGGAGGGATaGCCCACAACTCCAGCAGCGTCGAGTATTGACGATTGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: EREVEVVKGSQALEG*PTTPAASSIDDCRV
Trigger: GACTCTGCAATCGTCAATACTCGACGCTGCTGGAGTTGTGGGGCATCCCTCCAAGGCCTGACTCCCTTTCACTACCTCGACTTCTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS GCA 90 bp GTCAGCCGCAACAGTATAAGGTGGCCGGGCCCGAGAGTCCCTAGGTaGAAAAACTCCAAAAATGGGTTTAACTTGCCTCCTGCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: VSRNSIRWPGPRVPR*KNSKNGFNLPPAFP
Trigger: GGGAAAGGCAGGAGGCAAGTTAAACCCATTTTTGGAGTTTTTGCACCTAGGGACTCTCGGGCCCGGCCACCTTATACTGTTGCGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463792.5
ENST00000483188.1
CDS GCA 90 bp TTCTCTTCTGTAGACAGCACAGACTCAGTACTGGAGACCAGCTGGTaGTCCCTGGCTAACAGGATCCACTCCATCCTTACCCCCATGCAG +
Preference number: 5 (lower is better)
Translates to: FSSVDSTDSVLETSW*SLANRIHSILTPMQ
Trigger: CTGCATGGGGGTAAGGATGGAGTGGATCCTGTTAGCCAGGGAGCACCAGCTGGTCTCCAGTACTGAGTCTGTGCTGTCTACAGAAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467884.5
ENST00000474225.5
ENST00000494886.1
CDS GCA 90 bp CTGAATACTGTGCAGGTACTCATTTCTCTTGCCCCCAATGGTCCCTaGAACATTACAGTCCACCCACTCCCTCATCCCGCACCCCATACC +
Preference number: 5 (lower is better)
Translates to: LNTVQVLISLAPNGP*NITVHPLPHPAPHT
Trigger: GGTATGGGGTGCGGGATGAGGGAGTGGGTGGACTGTAATGTTGCAGGGACCATTGGGGGCAAGAGAAATGAGTACCTGCACAGTATTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS CCA 90 bp TATACCCAAAATGACTCAGGATGGGGACCTTTACTCACTGCACAGTaGGGTCAGCACCTGCTTCCAGCAGCAGACGAACCACTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: YTQNDSGWGPLLTAQ*GQHLLPAADEPLSL
Trigger: GAGGCTCAGTGGTTCGTCTGCTGCTGGAAGCAGGTGCTGACCCCACTGTGCAGTGAGTAAAGGTCCCCATCCTGAGTCATTTTGGGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463792.5
ENST00000483188.1
CDS CCA 90 bp CACTTCTCTTCTGTAGACAGCACAGACTCAGTACTGGAGACCAGCTaGTGCTCCCTGGCTAACAGGATCCACTCCATCCTTACCCCCATG +
Preference number: 5 (lower is better)
Translates to: HFSSVDSTDSVLETS*CSLANRIHSILTPM
Trigger: CATGGGGGTAAGGATGGAGTGGATCCTGTTAGCCAGGGAGCACCAGCTGGTCTCCAGTACTGAGTCTGTGCTGTCTACAGAAGAGAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467884.5
ENST00000474225.5
ENST00000494886.1
CDS-3UTR CAA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCAAAGTCCTCAGGTCGATaGCCGGATTTCTGCAACACA +
Preference number: 5 (lower is better)
Translates to: PHTSSPVFALVPECPSPPKSSGR*PDFCNT
Trigger: TGTGTTGCAGAAATCCGGCAATCGACCTGAGGACTT...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CAA 90 bp CCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCAGGAAGGCTCCTCTTCTaGAGTTTGCTGGAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: PHTSSPVFALVPECPSPPGRLLF*SLLEKS
Trigger: ACTCTTCTCCAGCAAACTCAAGAAGAGGAGCCTTCC...TGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CAA 90 bp AGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCACAGCAGCGTCGAGTATaGACGATTGCAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: SPVFALVPECPSPPSSKSQQRRV*TIAESG
Trigger: CCCTGACTCTGCAATCGTCAATACTCGACGCTGCTG...TGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CAA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAACAGCAGCGTCGAGTATaGACGATTGCAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: SSPVFALVPECPSPPSSKQQRRV*TIAESG
Trigger: CCCTGACTCTGCAATCGTCAATACTCGACGCTGCTG...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS TCA 90 bp AGATCCAGAGTCCCCACAGTCAACTCCACTAGCTCCAACTCTACCTaGAAGCCATCTTCTCCCTCCGACCCTGAACCCTGTTTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: RSRVPTVNSTSSNST*KPSSPSDPEPCLGD
Trigger: ATCTCCCAAACAGGGTTCAGGGTCGGAGGGAGAAGATGGCTTTCAGGTAGAGTTGGAGCTAGTGGAGTTGACTGTGGGGACTCTGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CAA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCAAGTCCTCAGGTCGATaGCCGGATTTCTGCAACACA +
Preference number: 5 (lower is better)
Translates to: PETVPAPHTSSPVFALVPKSSGR*PDFCNT
Trigger: TGTGTTGCAGAAATCCGGCAATCGACCTGAGGACTT...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS TCA 90 bp GGCATCTGGATTCTTCTCCATGAACCTTCGGAACTCATTACGTGTTaGTTTGTCAGCCGCAACAGTATAAGGTGGCCGGGCCCGAGAGTC +
Preference number: 5 (lower is better)
Translates to: GIWILLHEPSELITC*FVSRNSIRWPGPRV
Trigger: GACTCTCGGGCCCGGCCACCTTATACTGTTGCGGCTGACAAATCAACACGTAATGAGTTCCGAAGGTTCATGGAGAAGAATCCAGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
ENST00000483188.1
CDS TCA 90 bp AGATCCAGAGTCCCCACAGTCAACTCCACTAGCTCCAACTCTACCTaGAAGCCATCTTCTCCCTCCGACCCTGAACCTAGGGAAAAACCT +
Preference number: 5 (lower is better)
Translates to: RSRVPTVNSTSSNST*KPSSPSDPEPREKP
Trigger: AGGTTTTTCCCTAGGTTCAGGGTCGGAGGGAGAAGATGGCTTTCAGGTAGAGTTGGAGCTAGTGGAGTTGACTGTGGGGACTCTGGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463792.5
ENST00000477479.5
CDS CCA 90 bp GGAGCCGGCGACATGGCTGAGCAGAAATTATTTAGCAGCAGCTCCTaGAGTAGAAAGCGTGTAAGAAACAGGGCTCCTGCAAACGAGATC +
Preference number: 5 (lower is better)
Translates to: GAGDMAEQKLFSSSS*SRKRVRNRAPANEI
Trigger: GATCTCGTTTGCAGGAGCCCTGTTTCTTACACGCTTTCTACTCCAGGAGCTGCTGCTAAATAATTTCTGCTCAGCCATGTCGCCGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416565.1
ENST00000436226.1
CDS CCA 90 bp TCACATGCAGAAATGAGGCTCTCAGCCCAGACAAGAACAAGTCCCTaGACTCTCCGTATGAGTAGCCTTAGGGTGCCGCACAATAGAGGA +
Preference number: 5 (lower is better)
Translates to: SHAEMRLSAQTRTSP*TLRMSSLRVPHNRG
Trigger: TCCTCTATTGTGCGGCACCCTAAGGCTACTCATACGGAGAGTCCAGGGACTTGTTCTTGTCTGGGCTGAGAGCCTCATTTCTGCATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000477479.5
CDS CCA 90 bp TGCCTTCTGCTCCCTTTTCCGTGTAGCCTGCCGTGCCTCCATTTCTaGTGTCAATGGTCCTGGCACCTGGAGGATTTCAAATATAAGACC +
Preference number: 5 (lower is better)
Translates to: CLLLPFPCSLPCLHF*CQWSWHLEDFKYKT
Trigger: GGTCTTATATTTGAAATCCTCCAGGTGCCAGGACCATTGACACCAGAAATGGAGGCACGGCAGGCTACACGGAAAAGGGAGCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460966.1
ENST00000463792.5
CDS-3UTR CAA 90 bp CCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTAGTTCCCAGGAGAGGCTTGTCCTaGAGACGTTGCTTTAGGTTA +
Preference number: 5 (lower is better)
Translates to: PETVPAPHTSSPVFALVPRRGLS*RRCFRL
Trigger: TAACCTAAAGCAACGTCTCAAGGACAAGCCTCTCCT...GGGAACTAGGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CAA 90 bp TCTAGCCCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAAGGAAGGCTCCTCTTCTaGAGTTTGCTGGAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: SSPVFALVPECPSPPSSKGRLLF*SLLEKS
Trigger: ACTCTTCTCCAGCAAACTCAAGAAGAGGAGCCTTCC...TTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGGGCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS TCA 90 bp CTGCAGCATCTGCCAGAACATCCCAAATTCCCTCAACCACCCTTCTaGATACTGTGCAGGTACTCATTTCTCTTGCCCCCAATGGTCCCT +
Preference number: 5 (lower is better)
Translates to: LQHLPEHPKFPQPPF*ILCRYSFLLPPMVP
Trigger: AGGGACCATTGGGGGCAAGAGAAATGAGTACCTGCACAGTATTCAGAAGGGTGGTTGAGGGAATTTGGGATGTTCTGGCAGATGCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS GCA 90 bp TCTCCCCGTCCCTCCTCCTGCCATTTCTGTTTTCACTGCAGCATCTaGCAGAACATCCCAAATTCCCTCAACCACCCTTCTGAATACTGT +
Preference number: 5 (lower is better)
Translates to: SPRPSSCHFCFHCSI*QNIPNSLNHPSEYC
Trigger: ACAGTATTCAGAAGGGTGGTTGAGGGAATTTGGGATGTTCTGGCAGATGCTGCAGTGAAAACAGAAATGGCAGGAGGAGGGACGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS-3UTR CAA 90 bp AGATGCTGGAAAGATCTCCTGTGGAGCTCTGCTTTTCAAAGTCCAGGGCAGACAGCAGACAGGAGAGGCTaGTCCTTGAGACGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: RCWKDLLWSSAFQSPGQTADRRG*SLRRCF
Trigger: AAAGCAACGTCTCAAGGACAAGCCTCTCCTGTCTGC...TGTCTGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCAGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR CAA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCTGCAGGGGTGCTCCCTaGCCTCCAAAGAACAAAGAC +
Preference number: 5 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPCRGAP*PPKNKD
Trigger: GTCTTTGTTCTTTGGAGGCAAGGGAGCACCCCTGCA...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CAA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCAAAGGGAGTCAGGCCTaGGAGGGATGCCCCACAACT +
Preference number: 5 (lower is better)
Translates to: IKIPETVPAPHTSSPVFAKGSQA*EGCPTT
Trigger: AGTTGTGGGGCATCCCTCCAAGGCCTGACTCCCTTT...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS GCA 90 bp GCCCGAGAGTCCCTAGGTGCAAAAACTCCAAAAATGGGTTTAACTTaGCTCCTGCCTTTCCCAACATCACCCAACCAGACCAAGGGAATA +
Preference number: 5 (lower is better)
Translates to: ARESLGAKTPKMGLT*LLPFPTSPNQTKGI
Trigger: TATTCCCTTGGTCTGGTTGGGTGATGTTGGGAAAGGCAGGAGGCAAGTTAAACCCATTTTTGGAGTTTTTGCACCTAGGGACTCTCGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463792.5
ENST00000483188.1
CDS-3UTR CAA 90 bp CCTGTCTTTGCCCTAGTTCCCGAGTGTCCTTCACCCCCATCTTCCAAATCATCTAGGAGAGGCTTGTCCTaGAGACGTTGCTTTAGGTTA +
Preference number: 5 (lower is better)
Translates to: PVFALVPECPSPPSSKSSRRGLS*RRCFRL
Trigger: TAACCTAAAGCAACGTCTCAAGGACAAGCCTCTCCT...AGATGATTTGGAAGATGGGGGTGAAGGACACTCGGGAACTAGGGCAAAGACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CAA 90 bp TGCTGGAAAGATCTCCTGTGGAGCTCTGCTTTTCAAAGTCCAGGGCAGACAGGAAGGAGAGGCTTGTCCTaGAGACGTTGCTTTAGGTTA +
Preference number: 5 (lower is better)
Translates to: CWKDLLWSSAFQSPGQTGRRGLS*RRCFRL
Trigger: TAACCTAAAGCAACGTCTCAAGGACAAGCCTCTCCT...TCCTGTCTGCCCTGGACTTTGAAAAGCAGAGCTCCACAGGAGATCTTTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435521.5
CDS-3UTR CAA 90 bp ATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCTGCAGGGGTGCTCCCTaGCCTCCAAAGAACAAAGAC +
Preference number: 5 (lower is better)
Translates to: IKIPETVPAPHTSSPVFACRGAP*PPKNKD
Trigger: GTCTTTGTTCTTTGGAGGCAAGGGAGCACCCCTGCA...GGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS TCA 90 bp TCTCCTCTCTTACTGTTTTCCAGTGTGTCTGAGGTGAGTGCAGTCTaGCTGCTTCCCGAGGGTCTTCTTCATAGACATGCAAAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: SPLLLFSSVSEVSAV*LLPEGLLHRHAKWS
Trigger: TGACCACTTTGCATGTCTATGAAGAAGACCCTCGGGAAGCAGTCAGACTGCACTCACCTCAGACACACTGGAAAACAGTAAGAGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000467884.5
ENST00000468387.1
ENST00000477479.5
ENST00000496346.5
CDS TCA 90 bp CCATCTTCTCCCTCCGACCCTGAACCTAGGGAAAAACCTGACATGTaGAATCCATCTAGGGAGTACTCAGAGGGTAGAAGCAGATGCATA +
Preference number: 5 (lower is better)
Translates to: PSSPSDPEPREKPDM*NPSREYSEGRSRCI
Trigger: TATGCATCTGCTTCTACCCTCTGAGTACTCCCTAGATGGATTTCACATGTCAGGTTTTTCCCTAGGTTCAGGGTCGGAGGGAGAAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463792.5
ENST00000477479.5
CDS-3UTR CAA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCCTCCTCTTCTTGAGTTaGCTGGAGAAGAGTCCGATG +
Preference number: 5 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPLLFLS*LEKSPM
Trigger: CATCGGACTCTTCTCCAGCAAACTCAAGAAGAGGAG...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CAA 90 bp TTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTGCCCGGAAGGCTCCTCTTCTaGAGTTTGCTGGAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: LKFQRQYQLHIPLALSLPGRLLF*SLLEKS
Trigger: ACTCTTCTCCAGCAAACTCAAGAAGAGGAGCCTTCC...GGGCAAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CAA 90 bp GTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTAGCCCTGTCTTTCAGCAGCGTCGAGTATaGACGATTGCAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: VIKIPETVPAPHTSSPVFQQRRV*TIAESG
Trigger: CCCTGACTCTGCAATCGTCAATACTCGACGCTGCTG...AAAGACAGGGCTAGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS TCA 90 bp GCACCTGAGCCTTGTTGTAATCGTAGGCATCTGGATTCTTCTCCATaGACCTTCGGAACTCATTACGTGTTGATTTGTCAGCCGCAACAG +
Preference number: 5 (lower is better)
Translates to: APEPCCNRRHLDSSP*TFGTHYVLICQPQQ
Trigger: CTGTTGCGGCTGACAAATCAACACGTAATGAGTTCCGAAGGTTCATGGAGAAGAATCCAGATGCCTACGATTACAACAAGGCTCAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000477479.5
ENST00000483188.1
CDS TCA 90 bp AAAGTAGCACATCAAGAGCTGAGTCCATTATATCACATGCAGAAATaGGGCTCTCAGCCCAGACAAGAACAAGTCCCTGGACTCTCCGTA +
Preference number: 5 (lower is better)
Translates to: KVAHQELSPLYHMQK*GSQPRQEQVPGLSV
Trigger: TACGGAGAGTCCAGGGACTTGTTCTTGTCTGGGCTGAGAGCCTCATTTCTGCATGTGATATAATGGACTCAGCTCTTGATGTGCTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463792.5
ENST00000465550.5
ENST00000477479.5
CDS CCA 90 bp GTAGCCTGCCGTGCCTCCATTTCTGGTGTCAATGGTCCTGGCACCTaGAGGATTTCAAATATAAGACCCTATAAGTTATCTTTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: VACRASISGVNGPGT*RISNIRPYKLSLVK
Trigger: TTTTACCAAAGATAACTTATAGGGTCTTATATTTGAAATCCTCCAGGTGCCAGGACCATTGACACCAGAAATGGAGGCACGGCAGGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460966.1
ENST00000463792.5
CDS-3UTR CAA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTGCAGACAGGAGAGGCTaGTCCTTGAGACGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSADRRG*SLRRCF
Trigger: AAAGCAACGTCTCAAGGACAAGCCTCTCCTGTCTGC...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000410034.7
CDS-3UTR CAA 90 bp TCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATGACCCTGAACCCTGTTaGGGAGATTCCTCATTCTGC +
Preference number: 5 (lower is better)
Translates to: SLPNFIVIKIPETVPAPHDPEPC*GDSSFC
Trigger: GCAGAATGAGGAATCTCCCAAACAGGGTTCAGGGTC...ATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CAA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTCTCCTCTTCTTGAGTTaGCTGGAGAAGAGTCCGATG +
Preference number: 5 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSLLFLS*LEKSPM
Trigger: CATCGGACTCTTCTCCAGCAAACTCAAGAAGAGGAG...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS GCA 90 bp GAATTTGCCAGTGCATTTTTAGGACAGAAACTCAGATCTGACAGTTaGCAGATAGTAATCAAACCCTGTTTGGGAGATTCCTCATTCTGC +
Preference number: 5 (lower is better)
Translates to: EFASAFLGQKLRSDS*QIVIKPCLGDSSFC
Trigger: GCAGAATGAGGAATCTCCCAAACAGGGTTTGATTACTATCTGGCAACTGTCAGATCTGAGTTTCTGTCCTAAAAATGCACTGGCAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000468387.1
ENST00000477479.5
ENST00000496346.5
CDS-3UTR CAA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTGGAACTCATTACGTGTaGATTTGTCAGCCGCAACAG +
Preference number: 5 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSGTHYV*ICQPQQ
Trigger: CTGTTGCGGCTGACAAATCAACACGTAATGAGTTCC...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CAA 90 bp ACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTGGAACTCATTACGTGTaGATTTGTCAGCCGCAACAG +
Preference number: 5 (lower is better)
Translates to: THSLPNFIVIKIPETVPAGTHYV*ICQPQQ
Trigger: CTGTTGCGGCTGACAAATCAACACGTAATGAGTTCC...AGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS TCA 90 bp GAAAGGGAGCCCAAATCCACAGTGACAAGAATTATATTCAGAGTGTaGTATACAAAGCAGAGGAGGATACAAAAGAGATGGCATGATACT +
Preference number: 5 (lower is better)
Translates to: EREPKSTVTRIIFRV*YTKQRRIQKRWHDT
Trigger: AGTATCATGCCATCTCTTTTGTATCCTCCTCTGCTTTGTATATCACACTCTGAATATAATTCTTGTCACTGTGGATTTGGGCTCCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465550.5
CDS-3UTR CAA 90 bp CCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCCACATACCTCTCACCACTTCTCTTCCTaGAAATATAGCACCAGCAAA +
Preference number: 5 (lower is better)
Translates to: PNFIVIKIPETVPAPHTSHHFSS*KYSTSK
Trigger: TTTGCTGGTGCTATATTTCAAGGAAGAGAAGTGGTG...AGAGGTATGTGGAGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
CDS-3UTR CAA 90 bp ACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCAGCTCACCACTTCTCTTCCTaGAAATATAGCACCAGCAAA +
Preference number: 5 (lower is better)
Translates to: THSLPNFIVIKIPETVPAHHFSS*KYSTSK
Trigger: TTTGCTGGTGCTATATTTCAAGGAAGAGAAGTGGTG...AGCTGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS-3UTR CAA 90 bp AGTACACATTCCTTGCCAAACTTTATTGTGATTAAAATTCCAGAGACAGTACCACACCACTTCTCTTCCTaGAAATATAGCACCAGCAAA +
Preference number: 5 (lower is better)
Translates to: STHSLPNFIVIKIPETVPHHFSS*KYSTSK
Trigger: TTTGCTGGTGCTATATTTCAAGGAAGAGAAGTGGTG...TGGTACTGTCTCTGGAATTTTAATCACAATAAAGTTTGGCAAGGAATGTGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323348.10
ENST00000409849.5
CDS TCA 72 bp CCAGGCTCAGGCCCTGAAAGACCGGAGCATCCGCGCTaGGGTCAAACAGGGAGATCGACGCAGGAGCCGGGG +
Preference number: 6 (lower is better)
Translates to: PGSGPERPEHPR*GQTGRSTQEPG
Trigger: CCCCGGCTCCTGCGTCGATCTCCCTGTTTGACCTCAGCGCGGATGCTCCGGTCTTTCAGGGCCTGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000323348.10
ENST00000410034.7
ENST00000416565.1
ENST00000435521.5
ENST00000436226.1
ENST00000447157.5
ENST00000463792.5
ENST00000464763.5
ENST00000477479.5
ENST00000486203.5
ENST00000491181.5
CDS GCA 72 bp CTGCCTCTGCTGCTGTTCCTCCCGTTGCCGCCGGGCTaGCTTCTGCTCCCTTTTCCGTGTAGCCTGCCGTGC +
Preference number: 6 (lower is better)
Translates to: LPLLLFLPLPPG*LLLPFPCSLPC
Trigger: GCACGGCAGGCTACACGGAAAAGGGAGCAGAAGGCAGCCCGGCGGCAACGGGAGGAACAGCAGCAGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS GCA 72 bp GGTAGGGGCTCCCAACTGGGCAGCGAGTCGGCGCTCTaGAGCCAGAGCTCTCTTCTCTCGGTCACTGAGGGC +
Preference number: 6 (lower is better)
Translates to: GRGSQLGSESAL*SQSSLLSVTEG
Trigger: GCCCTCAGTGACCGAGAGAAGAGAGCTCTGGCTGCAGAGCGCCGACTCGCTGCCCAGTTGGGAGCCCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS TCA 72 bp TCAGGCTCAGGCCCTGAAAGACCGGAGCATCCGCGCTaGGGTCAAACAGGGAGATCGACGCAGGAGCCGGGG +
Preference number: 6 (lower is better)
Translates to: SGSGPERPEHPR*GQTGRSTQEPG
Trigger: CCCCGGCTCCTGCGTCGATCTCCCTGTTTGACCTCAGCGCGGATGCTCCGGTCTTTCAGGGCCTGAGCCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461731.5
ENST00000474225.5
CDS CCA 72 bp GCAGAGTCAGGGATTGGAGAGGTAGGGGCTCCCAACTaGGCAGCGAGTCGGCGCTCTGCAGCCAGAGCTCTC +
Preference number: 6 (lower is better)
Translates to: AESGIGEVGAPN*AASRRSAARAL
Trigger: GAGAGCTCTGGCTGCAGAGCGCCGACTCGCTGCCCAGTTGGGAGCCCCTACCTCTCCAATCCCTGACTCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS GCA 72 bp TGCTGCTGTTCCTCCCGTTGCCGCCGGGCTGCCTTCTaGTCCCTTTTCCGTGTAGCCTGCCGTGCCTCCATT +
Preference number: 6 (lower is better)
Translates to: CCCSSRCRRAAF*SLFRVACRASI
Trigger: AATGGAGGCACGGCAGGCTACACGGAAAAGGGAGCAGAAGGCAGCCCGGCGGCAACGGGAGGAACAGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS TCA 72 bp GGCGCTCTGCAGCCAGAGCTCTCTTCTCTCGGTCACTaGGGGCGGCAAATCGCCGCTGCTCTTCTCGTTCAC +
Preference number: 6 (lower is better)
Translates to: GALQPELSSLGH*GRQIAAALLVH
Trigger: GTGAACGAGAAGAGCAGCGGCGATTTGCCGCCCTCAGTGACCGAGAGAAGAGAGCTCTGGCTGCAGAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS GCA 72 bp CTCTTCTCTCGGTCACTGAGGGCGGCAAATCGCCGCTaGTCTTCTCGTTCACGCTCCTCCTGCTCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LFSRSLRAANRR*SSRSRSSCSCC
Trigger: GCAGCAGGAGCAGGAGGAGCGTGAACGAGAAGAGCAGCGGCGATTTGCCGCCCTCAGTGACCGAGAGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS TCA 72 bp CGAGATGCTGGAAAGATCTCCAAACGTCCCGGGAGCTaGGCGGCTCGCAAGTCCTCAGGTCGATTGCCGGAT +
Preference number: 6 (lower is better)
Translates to: RDAGKISKRPGS*AARKSSGRLPD
Trigger: ATCCGGCAATCGACCTGAGGACTTGCGAGCCGCTCAGCTCCCGGGACGTTTGGAGATCTTTCCAGCATCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409849.5
ENST00000467884.5
ENST00000475202.5
ENST00000496346.5
CDS GCA 72 bp GGCTGCCTTCTGCTCCCTTTTCCGTGTAGCCTGCCGTaGCTCCATTTCTGGTGTCAATGGTCCTGGCACCTG +
Preference number: 6 (lower is better)
Translates to: GCLLLPFPCSLP*LHFWCQWSWHL
Trigger: CAGGTGCCAGGACCATTGACACCAGAAATGGAGGCACGGCAGGCTACACGGAAAAGGGAGCAGAAGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
ENST00000483188.1
CDS GCA 72 bp GGGCTCCTGCAAACGAGATCCTACTGCTGCGTCTCCTaGCTGCCTGACTTGGTTTCTCCTGCACCGCAAGAC +
Preference number: 6 (lower is better)
Translates to: GLLQTRSYCCVS*LPDLVSPAPQD
Trigger: GTCTTGCGGTGCAGGAGAAACCAAGTCAGGCAGGCAGGAGACGCAGCAGTAGGATCTCGTTTGCAGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416565.1
ENST00000436226.1
CDS GCA 72 bp ACCAGCCTCCTCCAGCGCCTTAGCCCAGCTTGGCCCTaGCAGCAGGTCACGAACATCCTAGAGAAGAGAGTA +
Preference number: 6 (lower is better)
Translates to: TSLLQRLSPAWP*QQVTNILEKRV
Trigger: TACTCTCTTCTCTAGGATGTTCGTGACCTGCTGGCAGGGCCAAGCTGGGCTAAGGCGCTGGAGGAGGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468387.1
CDS CCA 72 bp GCAGCGTCGAGTATTGACGATTGCAGAGTCAGGGATTaGAGAGGTAGGGGCTCCCAACTGGGCAGCGAGTCG +
Preference number: 6 (lower is better)
Translates to: AASSIDDCRVRD*RGRGSQLGSES
Trigger: CGACTCGCTGCCCAGTTGGGAGCCCCTACCTCTCCAATCCCTGACTCTGCAATCGTCAATACTCGACGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS GCA 72 bp GCGGCTCGCAAGTCCTCAGGTCGATTGCCGGATTTCTaGAACACAACAATCCCCGTCACTACGGAGCAGCGA +
Preference number: 6 (lower is better)
Translates to: AARKSSGRLPDF*NTTIPVTTEQR
Trigger: TCGCTGCTCCGTAGTGACGGGGATTGTTGTGTTGCAGAAATCCGGCAATCGACCTGAGGACTTGCGAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000453432.5
ENST00000461731.5
ENST00000464763.5
ENST00000467884.5
ENST00000474225.5
ENST00000475202.5
CDS CCA 72 bp AAAGTGGTCAGCTTATGGAGCACACGCTGTAGCTCTTaGAAGGTGGGTCTGCGGGTGGCGAGGGGGATATCC +
Preference number: 6 (lower is better)
Translates to: KVVSLWSTRCSS*KVGLRVARGIS
Trigger: GGATATCCCCCTCGCCACCCGCAGACCCACCTTCCAAGAGCTACAGCGTGTGCTCCATAAGCTGACCACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000467884.5
ENST00000468387.1
ENST00000477479.5
ENST00000496346.5
CDS CCA 72 bp GGCCCAAGGGGGCAGCAACTGCCTGGGATGACTGTGTaGAAGGCTCCTCTTCTTGAGTTTGCTGGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: GPRGQQLPGMTV*KAPLLEFAGEE
Trigger: CTCTTCTCCAGCAAACTCAAGAAGAGGAGCCTTCCACACAGTCATCCCAGGCAGTTGCTGCCCCCTTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS CCA 72 bp GCACAGACTCAGTACTGGAGACCAGCTGGTGCTCCCTaGCTAACAGGATCCACTCCATCCTTACCCCCATGC +
Preference number: 6 (lower is better)
Translates to: AQTQYWRPAGAP*LTGSTPSLPPC
Trigger: GCATGGGGGTAAGGATGGAGTGGATCCTGTTAGCCAGGGAGCACCAGCTGGTCTCCAGTACTGAGTCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467884.5
ENST00000474225.5
ENST00000494886.1
CDS CCA 72 bp CCCATACCGAGTATTGACGATTGCAGAGTCAGGGATTaGAGAGGTAGGGGCTCCCAACTGGGCAGCGAGTCG +
Preference number: 6 (lower is better)
Translates to: PIPSIDDCRVRD*RGRGSQLGSES
Trigger: CGACTCGCTGCCCAGTTGGGAGCCCCTACCTCTCCAATCCCTGACTCTGCAATCGTCAATACTCGGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS CCA 72 bp TATTGTACCAGCCTCCTCCAGCGCCTTAGCCCAGCTTaGCCCTGCCAGCAGGTCACGAACATCCTAGAGAAG +
Preference number: 6 (lower is better)
Translates to: YCTSLLQRLSPA*PCQQVTNILEK
Trigger: CTTCTCTAGGATGTTCGTGACCTGCTGGCAGGGCCAAGCTGGGCTAAGGCGCTGGAGGAGGCTGGTACAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468387.1
CDS CAA 72 bp CCACCCACTCCCTCATCCCGCACCCCATACCGAGTATaGACGATTGCAGAGTCAGGGATTGGAGAGGTAGGG +
Preference number: 6 (lower is better)
Translates to: PPTPSSRTPYRV*TIAESGIGEVG
Trigger: CCCTACCTCTCCAATCCCTGACTCTGCAATCGTCAATACTCGGTATGGGGTGCGGGATGAGGGAGTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS CAA 90 bp CATTACAGTCCACCCACTCCCTCATCCCGCACCCCATACCGAGTATaGACGATTGCAGAGTCAGGGATTGGAGAGGTAGGGGCTCCCAAC +
Preference number: 6 (lower is better)
Translates to: HYSPPTPSSRTPYRV*TIAESGIGEVGAPN
Trigger: GTTGGGAGCCCCTACCTCTCCAATCCCTGACTCTGCAATCGTCAATACTCGGTATGGGGTGCGGGATGAGGGAGTGGGTGGACTGTAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS TCA 72 bp ACTGCCTGGGATGACTGTGTGGAAGGCTCCTCTTCTTaGGTTTGCTGGAGAAGAGTCCGATGTGCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: TAWDDCVEGSSS*VCWRRVRCAPA
Trigger: GGCTGGGGCACATCGGACTCTTCTCCAGCAAACTCAAGAAGAGGAGCCTTCCACACAGTCATCCCAGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS TCA 72 bp GGCCTTGGAGGGATGCCCCACAACTCCAGCAGCGTCTaGACAAGAGGAAGAAAAATGGCTGGACAGGTACCC +
Preference number: 6 (lower is better)
Translates to: GLGGMPHNSSSV*TRGRKMAGQVP
Trigger: GGGTACCTGTCCAGCCATTTTTCTTCCTCTTGTTCAGACGCTGCTGGAGTTGTGGGGCATCCCTCCAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS GCA 72 bp GACAGAACTCTAGGGTCTGCAGGGCTGGGAGCTAGCTaGAGCTTTAGCACTCCAACATCTCCAGCTCGGCAA +
Preference number: 6 (lower is better)
Translates to: DRTLGSAGLGAS*SFSTPTSPARQ
Trigger: TTGCCGAGCTGGAGATGTTGGAGTGCTAAAGCTGCAGCTAGCTCCCAGCCCTGCAGACCCTAGAGTTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS GCA 72 bp GTCGAGGTAGTGAAAGGGAGTCAGGCCTTGGAGGGATaGCCCACAACTCCAGCAGCGTCGAGTATTGACGAT +
Preference number: 6 (lower is better)
Translates to: VEVVKGSQALEG*PTTPAASSIDD
Trigger: ATCGTCAATACTCGACGCTGCTGGAGTTGTGGGGCATCCCTCCAAGGCCTGACTCCCTTTCACTACCTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS GCA 72 bp CCTCACTGGCTGAGTCTGAGTCTTCTGATCCCGAGATaGTGGAAAGATCTCCAAACGTCCCGGGAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: PHWLSLSLLIPR*WKDLQTSRELS
Trigger: GCTCAGCTCCCGGGACGTTTGGAGATCTTTCCAGCATCTCGGGATCAGAAGACTCAGACTCAGCCAGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409849.5
ENST00000467884.5
ENST00000475202.5
ENST00000496346.5
CDS CCA 72 bp TCCCTGCCTGACGGCGATGATCCTGGAGGCAACGTGTaGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAG +
Preference number: 6 (lower is better)
Translates to: SLPDGDDPGGNV*SRKRSRGSERE
Trigger: CTCCCTTTCACTACCTCGACTTCTCTTTCTGCTCCACACGTTGCCTCCAGGATCATCGCCGTCAGGCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000460966.1
ENST00000463792.5
ENST00000477479.5
CDS CAA 72 bp ACGAGATCCTACTGCTGCGTCTCCTGCCTGCCTGACTaGGTTTCTCCTGCACCGCAAGACTTCTCGTCTCTC +
Preference number: 6 (lower is better)
Translates to: TRSYCCVSCLPD*VSPAPQDFSSL
Trigger: GAGAGACGAGAAGTCTTGCGGTGCAGGAGAAACCAAGTCAGGCAGGCAGGAGACGCAGCAGTAGGATCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416565.1
ENST00000436226.1
CDS CAA 90 bp CTCCTGCAAACGAGATCCTACTGCTGCGTCTCCTGCCTGCCTGACTaGGTTTCTCCTGCACCGCAAGACTTCTCGTCTCTCATCCTGCTA +
Preference number: 6 (lower is better)
Translates to: LLQTRSYCCVSCLPD*VSPAPQDFSSLILL
Trigger: TAGCAGGATGAGAGACGAGAAGTCTTGCGGTGCAGGAGAAACCAAGTCAGGCAGGCAGGAGACGCAGCAGTAGGATCTCGTTTGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416565.1
ENST00000436226.1
CDS GCA 72 bp CCCTGGCTAACAGGATCCACTCCATCCTTACCCCCATaGAGCACCCTCTCACCCTTGAAATATAGCACCAGC +
Preference number: 6 (lower is better)
Translates to: PWLTGSTPSLPP*STLSPLKYSTS
Trigger: GCTGGTGCTATATTTCAAGGGTGAGAGGGTGCTGCATGGGGGTAAGGATGGAGTGGATCCTGTTAGCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467884.5
ENST00000474225.5
ENST00000494886.1
CDS GCA 72 bp GTAGACAGCACAGACTCAGTACTGGAGACCAGCTGGTaGTCCCTGGCTAACAGGATCCACTCCATCCTTACC +
Preference number: 6 (lower is better)
Translates to: VDSTDSVLETSW*SLANRIHSILT
Trigger: GGTAAGGATGGAGTGGATCCTGTTAGCCAGGGAGCACCAGCTGGTCTCCAGTACTGAGTCTGTGCTGTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467884.5
ENST00000474225.5
ENST00000494886.1
CDS GCA 72 bp GTGCAGGTACTCATTTCTCTTGCCCCCAATGGTCCCTaGAACATTACAGTCCACCCACTCCCTCATCCCGCA +
Preference number: 6 (lower is better)
Translates to: VQVLISLAPNGP*NITVHPLPHPA
Trigger: TGCGGGATGAGGGAGTGGGTGGACTGTAATGTTGCAGGGACCATTGGGGGCAAGAGAAATGAGTACCTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS CCA 72 bp CCTTATATAGTGTGGCTTCATTGTAGCGCCTCAGGTTaGCTCCAGCAGAGTGTGATGGCCCACCTCGGGCAT +
Preference number: 6 (lower is better)
Translates to: PYIVWLHCSASG*LQQSVMAHLGH
Trigger: ATGCCCGAGGTGGGCCATCACACTCTGCTGGAGCCAACCTGAGGCGCTACAATGAAGCCACACTATATAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000467884.5
ENST00000474225.5
ENST00000477479.5
ENST00000490526.1
ENST00000494886.1
ENST00000496346.5
CDS CCA 72 bp GAAATGAGGCTCTCAGCCCAGACAAGAACAAGTCCCTaGACTCTCCGTATGAGTAGCCTTAGGGTGCCGCAC +
Preference number: 6 (lower is better)
Translates to: EMRLSAQTRTSP*TLRMSSLRVPH
Trigger: GTGCGGCACCCTAAGGCTACTCATACGGAGAGTCCAGGGACTTGTTCTTGTCTGGGCTGAGAGCCTCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000477479.5
ENST00000496346.5
CDS CAA 90 bp TGTGGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAGTCAGGCCTaGGAGGGATGCCCCACAACTCCAGCAGCGTCGAGTATTGACGAT +
Preference number: 6 (lower is better)
Translates to: CGAEREVEVVKGSQA*EGCPTTPAASSIDD
Trigger: ATCGTCAATACTCGACGCTGCTGGAGTTGTGGGGCATCCCTCCAAGGCCTGACTCCCTTTCACTACCTCGACTTCTCTTTCTGCTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
CDS TCA 72 bp CAGCCCAGACAAGAACAAGTCCCTGGACTCTCCGTATaGGTAGCCTTAGGGTGCCGCACAATAGAGGAAAGC +
Preference number: 6 (lower is better)
Translates to: QPRQEQVPGLSV*VALGCRTIEES
Trigger: GCTTTCCTCTATTGTGCGGCACCCTAAGGCTACTCATACGGAGAGTCCAGGGACTTGTTCTTGTCTGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000477479.5
ENST00000496346.5
CDS CCA 72 bp CTCCCTTTTCCGTGTAGCCTGCCGTGCCTCCATTTCTaGTGTCAATGGTCCTGGCACCTGGAGGATTTCAAA +
Preference number: 6 (lower is better)
Translates to: LPFPCSLPCLHF*CQWSWHLEDFK
Trigger: TTTGAAATCCTCCAGGTGCCAGGACCATTGACACCAGAAATGGAGGCACGGCAGGCTACACGGAAAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460966.1
ENST00000463792.5
CDS TCA 72 bp GACTTCTCGTCTCTCATCCTGCTACCAACTGTGAGATaGATACCTTGGCCCCCGTCCACTTTCTCAAACCCC +
Preference number: 6 (lower is better)
Translates to: DFSSLILLPTVR*IPWPPSTFSNP
Trigger: GGGGTTTGAGAAAGTGGACGGGGGCCAAGGTATTCATCTCACAGTTGGTAGCAGGATGAGAGACGAGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416565.1
ENST00000436226.1
CDS CCA 72 bp CCGTGTAGCCTGCCGTGCCTCCATTTCTGGTGTCAATaGTCCTGGCACCTGGAGGATTTCAAATATAAGACC +
Preference number: 6 (lower is better)
Translates to: PCSLPCLHFWCQ*SWHLEDFKYKT
Trigger: GGTCTTATATTTGAAATCCTCCAGGTGCCAGGACCATTGACACCAGAAATGGAGGCACGGCAGGCTACACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460966.1
ENST00000463792.5
CDS CAA 90 bp GGCCCGAGAGTCCCTAGGTGCAAAAACTCCAAAAATGGGTTTAACTaGCCTCCTGCCTTTCCCAACATCACCCAACCAGACCAAGGGAAT +
Preference number: 6 (lower is better)
Translates to: GPRVPRCKNSKNGFN*PPAFPNITQPDQGN
Trigger: ATTCCCTTGGTCTGGTTGGGTGATGTTGGGAAAGGCAGGAGGCAAGTTAAACCCATTTTTGGAGTTTTTGCACCTAGGGACTCTCGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463792.5
ENST00000483188.1
CDS TCA 72 bp CGCAAGACTTCTCGTCTCTCATCCTGCTACCAACTGTaGGATGAATACCTTGGCCCCCGTCCACTTTCTCAA +
Preference number: 6 (lower is better)
Translates to: RKTSRLSSCYQL*DEYLGPRPLSQ
Trigger: TTGAGAAAGTGGACGGGGGCCAAGGTATTCATCTCACAGTTGGTAGCAGGATGAGAGACGAGAAGTCTTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416565.1
ENST00000436226.1
CDS TCA 72 bp CCCTCCGACCCTGAACCTAGGGAAAAACCTGACATGTaGAATCCATCTAGGGAGTACTCAGAGGGTAGAAGC +
Preference number: 6 (lower is better)
Translates to: PSDPEPREKPDM*NPSREYSEGRS
Trigger: GCTTCTACCCTCTGAGTACTCCCTAGATGGATTTCACATGTCAGGTTTTTCCCTAGGTTCAGGGTCGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463792.5
ENST00000477479.5
CDS CCA 72 bp CTGCTTCCCGAGGGTCTTCTTCATAGACATGCAAAGTaGTCAGCTTATGGAGCACACGCTGTAGCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: LLPEGLLHRHAK*SAYGAHAVALG
Trigger: TCCAAGAGCTACAGCGTGTGCTCCATAAGCTGACCACTTTGCATGTCTATGAAGAAGACCCTCGGGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000467884.5
ENST00000468387.1
ENST00000477479.5
ENST00000496346.5
CDS CCA 72 bp CTCCAGCAGCGTCTGAACAAGAGGAAGAAAAATGGCTaGACAGGTACCCCAGAAACTTTCCAATCCACGCTC +
Preference number: 6 (lower is better)
Translates to: LQQRLNKRKKNG*TGTPETFQSTL
Trigger: GAGCGTGGATTGGAAAGTTTCTGGGGTACCTGTCCAGCCATTTTTCTTCCTCTTGTTCAGACGCTGCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS TCA 72 bp TTCTTTCTCTCCTCTCTTACTGTTTTCCAGTGTGTCTaGGGTGAGTGCAGTCTGACTGCTTCCCGAGGGTCT +
Preference number: 6 (lower is better)
Translates to: FFLSSLTVFQCV*GECSLTASRGS
Trigger: AGACCCTCGGGAAGCAGTCAGACTGCACTCACCTCAGACACACTGGAAAACAGTAAGAGAGGAGAGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000467884.5
ENST00000468387.1
ENST00000477479.5
ENST00000496346.5
CDS TCA 72 bp CTGCCAGAACATCCCAAATTCCCTCAACCACCCTTCTaGATACTGTGCAGGTACTCATTTCTCTTGCCCCCA +
Preference number: 6 (lower is better)
Translates to: LPEHPKFPQPPF*ILCRYSFLLPP
Trigger: TGGGGGCAAGAGAAATGAGTACCTGCACAGTATTCAGAAGGGTGGTTGAGGGAATTTGGGATGTTCTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460966.1
CDS GCA 72 bp AACAGTATAAGGTGGCCGGGCCCGAGAGTCCCTAGGTaGAAAAACTCCAAAAATGGGTTTAACTTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: NSIRWPGPRVPR*KNSKNGFNLPP
Trigger: AGGAGGCAAGTTAAACCCATTTTTGGAGTTTTTGCACCTAGGGACTCTCGGGCCCGGCCACCTTATACTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463792.5
ENST00000483188.1
CDS TCA 72 bp TTACTGTTTTCCAGTGTGTCTGAGGTGAGTGCAGTCTaGCTGCTTCCCGAGGGTCTTCTTCATAGACATGCA +
Preference number: 6 (lower is better)
Translates to: LLFSSVSEVSAV*LLPEGLLHRHA
Trigger: TGCATGTCTATGAAGAAGACCCTCGGGAAGCAGTCAGACTGCACTCACCTCAGACACACTGGAAAACAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000467884.5
ENST00000468387.1
ENST00000477479.5
ENST00000496346.5
CDS TCA 72 bp ATTCTTCTCCATGAACCTTCGGAACTCATTACGTGTTaGTTTGTCAGCCGCAACAGTATAAGGTGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: ILLHEPSELITC*FVSRNSIRWPG
Trigger: GCCCGGCCACCTTATACTGTTGCGGCTGACAAATCAACACGTAATGAGTTCCGAAGGTTCATGGAGAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
ENST00000483188.1
CDS GCA 72 bp TCCCTAGGTGCAAAAACTCCAAAAATGGGTTTAACTTaGCTCCTGCCTTTCCCAACATCACCCAACCAGACC +
Preference number: 6 (lower is better)
Translates to: SLGAKTPKMGLT*LLPFPTSPNQT
Trigger: GGTCTGGTTGGGTGATGTTGGGAAAGGCAGGAGGCAAGTTAAACCCATTTTTGGAGTTTTTGCACCTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463792.5
ENST00000483188.1
CDS CCA 72 bp TCCTGGCACCTGAGCCTTGTTGTAATCGTAGGCATCTaGATTCTTCTCCATGAACCTTCGGAACTCATTACG +
Preference number: 6 (lower is better)
Translates to: SWHLSLVVIVGI*ILLHEPSELIT
Trigger: CGTAATGAGTTCCGAAGGTTCATGGAGAAGAATCCAGATGCCTACGATTACAACAAGGCTCAGGTGCCAGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000477479.5
ENST00000483188.1
CDS CCA 72 bp GACATGGCTGAGCAGAAATTATTTAGCAGCAGCTCCTaGAGTAGAAAGCGTGTAAGAAACAGGGCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: DMAEQKLFSSSS*SRKRVRNRAPA
Trigger: TGCAGGAGCCCTGTTTCTTACACGCTTTCTACTCCAGGAGCTGCTGCTAAATAATTTCTGCTCAGCCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416565.1
ENST00000436226.1
CDS CCA 72 bp CCAAATTATCCTCTCTATACCCAAAATGACTCAGGATaGGGACCTTTACTCACTGCACAGTGGGGTCAGCAC +
Preference number: 6 (lower is better)
Translates to: PNYPLYTQNDSG*GPLLTAQWGQH
Trigger: GTGCTGACCCCACTGTGCAGTGAGTAAAGGTCCCCATCCTGAGTCATTTTGGGTATAGAGAGGATAATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463792.5
ENST00000483188.1
CDS CAA 90 bp CAGAAACTCAGATCTGACAGTTGCCAGATAGTAATCAAACCCTGTTaGGGAGATTCCTCATTCTGCCCCAGCGCTTCCTTTTCATCCCTG +
Preference number: 6 (lower is better)
Translates to: QKLRSDSCQIVIKPC*GDSSFCPSASFSSL
Trigger: CAGGGATGAAAAGGAAGCGCTGGGGCAGAATGAGGAATCTCCCAAACAGGGTTTGATTACTATCTGGCAACTGTCAGATCTGAGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000467884.5
ENST00000468387.1
ENST00000477479.5
ENST00000496346.5
CDS TCA 72 bp GGCTCCCAAATCGAGTCCAACAGAGTTAAAAATCACTaGGCTTGCCTAGCCGAACTTTCTTCGTTACCCATG +
Preference number: 6 (lower is better)
Translates to: GSQIESNRVKNH*ACLAELSSLPM
Trigger: CATGGGTAACGAAGAAAGTTCGGCTAGGCAAGCTCAGTGATTTTTAACTCTGTTGGACTCGATTTGGGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416565.1
CDS TCA 72 bp CAGGCCAGTTTCAATTCAAGACTATGTTGTCAAGCGTaGTACCCACAACCAACAGGAAGGAAGAGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: QASFNSRLCCQA*YPQPTGRKRSR
Trigger: CCTGCTTCTCTTCCTTCCTGTTGGTTGTGGGTATCACGCTTGACAACATAGTCTTGAATTGAAACTGGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475202.5
ENST00000486203.5
ENST00000493563.1
CDS CCA 72 bp CCAGATGACCTGAGCCTTGTTGTAATCGTAGGCATCTaGATTCTTCTCCATGAACCTTCGGAACTCATTACG +
Preference number: 6 (lower is better)
Translates to: PDDLSLVVIVGI*ILLHEPSELIT
Trigger: CGTAATGAGTTCCGAAGGTTCATGGAGAAGAATCCAGATGCCTACGATTACAACAAGGCTCAGGTCATCTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463792.5
CDS CCA 72 bp ACCAGATCTAAAAGGCTTAACTCACCTTATATAGTGTaGCTTCATTGTAGCGCCTCAGGTTGGCTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: TRSKRLNSPYIV*LHCSASGWLQQ
Trigger: CTGCTGGAGCCAACCTGAGGCGCTACAATGAAGCCACACTATATAAGGTGAGTTAAGCCTTTTAGATCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474225.5
CDS CAA 72 bp AGATCTGACAGTTGCCAGATAGTAATCAAACCCTGTTaGGGAGATTCCTCATTCTGCCCCAGCGCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: RSDSCQIVIKPC*GDSSFCPSASF
Trigger: AAAGGAAGCGCTGGGGCAGAATGAGGAATCTCCCAAACAGGGTTTGATTACTATCTGGCAACTGTCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000467884.5
ENST00000468387.1
ENST00000477479.5
ENST00000496346.5
CDS TCA 72 bp CGTGAGGAGATACATGCAATGGCAAAAAGACTTGTTTaGAAACAAGGGCTGTGCTGGACATTACCCAGAGAT +
Preference number: 6 (lower is better)
Translates to: REEIHAMAKRLV*KQGLCWTLPRD
Trigger: ATCTCTGGGTAATGTCCAGCACAGCCCTTGTTTTCAAACAAGTCTTTTTGCCATTGCATGTATCTCCTCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464763.5
CDS CCA 72 bp CGTGCCTCCATTTCTGGTGTCAATGGTCCTGGCACCTaGAGGATTTCAAATATAAGACCCTATAAGTTATCT +
Preference number: 6 (lower is better)
Translates to: RASISGVNGPGT*RISNIRPYKLS
Trigger: AGATAACTTATAGGGTCTTATATTTGAAATCCTCCAGGTGCCAGGACCATTGACACCAGAAATGGAGGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460966.1
ENST00000463792.5
CDS CAA 90 bp GGGAATGGTGTTAACGTGAGGAGATACATGCAATGGCAAAAAGACTaGTTTGAAAACAAGGGCTGTGCTGGACATTACCCAGAGATTAAG +
Preference number: 6 (lower is better)
Translates to: GNGVNVRRYMQWQKD*FENKGCAGHYPEIK
Trigger: CTTAATCTCTGGGTAATGTCCAGCACAGCCCTTGTTTTCAAACAAGTCTTTTTGCCATTGCATGTATCTCCTCACGTTAACACCATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464763.5
CDS TCA 72 bp CCTTGTTGTAATCGTAGGCATCTGGATTCTTCTCCATaGACCTTCGGAACTCATTACGTGTTGATTTGTCAG +
Preference number: 6 (lower is better)
Translates to: PCCNRRHLDSSP*TFGTHYVLICQ
Trigger: CTGACAAATCAACACGTAATGAGTTCCGAAGGTTCATGGAGAAGAATCCAGATGCCTACGATTACAACAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323348.10
ENST00000409849.5
ENST00000410034.7
ENST00000463792.5
ENST00000477479.5
ENST00000483188.1
CDS TCA 72 bp ACTTTAACCTCCAAATTATCCTCTCTATACCCAAAATaGCTCAGGATGGGGACCTTTACTCACTGCACAGTG +
Preference number: 6 (lower is better)
Translates to: TLTSKLSSLYPK*LRMGTFTHCTV
Trigger: CACTGTGCAGTGAGTAAAGGTCCCCATCCTGAGTCATTTTGGGTATAGAGAGGATAATTTGGAGGTTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463792.5
ENST00000483188.1
CDS TCA 72 bp ATTTGCCAGTGCATTTTTAGGACAGAAACTCAGATCTaGCAGTTGCCAGATAGTAATCAAACCCTGTTTGGG +
Preference number: 6 (lower is better)
Translates to: ICQCIFRTETQI*QLPDSNQTLFG
Trigger: CCCAAACAGGGTTTGATTACTATCTGGCAACTGTCAGATCTGAGTTTCTGTCCTAAAAATGCACTGGCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000461731.5
ENST00000463792.5
ENST00000465550.5
ENST00000468387.1
ENST00000477479.5
ENST00000496346.5
CDS TCA 72 bp ACAGAGAAGCATCAGAAACATATCTGTTGCATTCACTaGGAGCAAGAAACTAAGGGCCAATTTTCACAAACA +
Preference number: 6 (lower is better)
Translates to: TEKHQKHICCIH*EQETKGQFSQT
Trigger: TGTTTGTGAAAATTGGCCCTTAGTTTCTTGCTCTCAGTGAATGCAACAGATATGTTTCTGATGCTTCTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494886.1