RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKS1A (Homo sapiens)

Ensembl gene IDs: ENSG00000064999

Ensembl transcript IDs: ENST00000360359.5, ENST00000470698.1, ENST00000649117.1, ENST00000650178.1

Found 965 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTaGCCAAGAGGAGGTCCTGCAGGCGGAGGTGAGGCCTGGGTCTTC +
Preference number: 1 (lower is better)
Translates to: QGSFCRTWWWQAQAK*PRGGPAGGGEAWVF
Trigger: GAAGACCCAGGCCTCACCTCCGCCTGCAGGACCTCCTCTTGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR CCA 90 bp GCCCAGCCCAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTaGAGACTGCCCTGCCCGTCGGGGTTCACAGTGCCTGCCCGTGGA +
Preference number: 1 (lower is better)
Translates to: AQPNPGELSVPLGSC*RLPCPSGFTVPARG
Trigger: TCCACGGGCAGGCACTGTGAACCCCGACGGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTGGGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 90 bp CCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTaGCCGTCGGGGTTCACAGTGCCTGCCCGTGGAGGCTTCCAGGGT +
Preference number: 1 (lower is better)
Translates to: PGELSVPLGSCWRLP*PSGFTVPARGGFQG
Trigger: ACCCTGGAAGCCTCCACGGGCAGGCACTGTGAACCCCGACGGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 90 bp CCAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTaGCCTGCCCGTCGGGGTTCACAGTGCCTGCCCGTGGAGGCTTCC +
Preference number: 1 (lower is better)
Translates to: PTLGSYQCRWDPAGD*PARRGSQCLPVEAS
Trigger: GGAAGCCTCCACGGGCAGGCACTGTGAACCCCGACGGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 90 bp AGAGCCCAGCCCAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTaGTGGAGACTGCCCTGCCCGTCGGGGTTCACAGTGCCTGCCCGT +
Preference number: 1 (lower is better)
Translates to: RAQPNPGELSVPLGS*WRLPCPSGFTVPAR
Trigger: ACGGGCAGGCACTGTGAACCCCGACGGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTGGGCTGGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 90 bp CAGGCCAAGTGGCCAAGAGGAGGTCCTGCAGGCGGAGGTGAGGCCTaGGTCTTCAGAGCTGCAGGTGAGGCGATGGCGGTGGTGGCAGTG +
Preference number: 1 (lower is better)
Translates to: QAKWPRGGPAGGGEA*VFRAAGEAMAVVAV
Trigger: CACTGCCACCACCGCCATCGCCTCACCTGCAGCTCTGAAGACCCAGGCCTCACCTCCGCCTGCAGGACCTCCTCTTGGCCACTTGGCCTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR GCA 90 bp CTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTaGAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAAGAGGA +
Preference number: 1 (lower is better)
Translates to: LAAWSASPQPRQGSF*RTWWWQAQAKWPRG
Trigger: TCCTCTTGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR TCA 90 bp GCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGCTaGGGGAGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGT +
Preference number: 1 (lower is better)
Translates to: AAAMGRPLLSEESGG*GRWSGACWTALSIC
Trigger: ACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCTCCCTCAGCCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 90 bp TCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCCGACCCACTaGGCTGCACCCAAGTTCCGTCCTGAGGACAGAGGCTATGCAGGC +
Preference number: 1 (lower is better)
Translates to: SVPLTHRPPPSLPTH*AAPKFRPEDRGYAG
Trigger: GCCTGCATAGCCTCTGTCCTCAGGACGGAACTTGGGTGCAGCTCAGTGGGTCGGAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 90 bp CAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATaGCAGCCTGCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTG +
Preference number: 1 (lower is better)
Translates to: QSEQQESLRSRGAPG*QPAPKATRGSIDAL
Trigger: CAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGCAGGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 90 bp CCAGGTCCCTGTCCTCCAGCAGCTCTGTTCTGTGAGGGAAGAAGGTaGGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTTGGTTCTAC +
Preference number: 1 (lower is better)
Translates to: PGPCPPAALFCEGRR*AVCAGHRPPPRWFY
Trigger: GTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAACAGAGCTGCTGGAGGACAGGGACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 90 bp TACAGCAGACAGGAGGAGGGAGCCACACAGAGCCCAGCCCAACCCTaGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTG +
Preference number: 1 (lower is better)
Translates to: YSRQEEGATQSPAQP*GAISAVGILLETAL
Trigger: CAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTGGGCTGGGCTCTGTGTGGCTCCCTCCTCCTGTCTGCTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 90 bp GCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGCCAGCCTaGCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTA +
Preference number: 1 (lower is better)
Translates to: AAGKLKKQRRTGMPA*PKGHAGEHRCTVTL
Trigger: TAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGCAGGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTaGGCCCTCACAGAAAGCAGTCTGTCCCTGGTCCAGCCACATCAC +
Preference number: 1 (lower is better)
Translates to: PSGAVSTDPRAWRIS*ALTESSLSLVQPHH
Trigger: GTGATGTGGCTGGACCAGGGACAGACTGCTTTCTGTGAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 90 bp ATACCCAGAGCCCCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTaGCGCATATCTTGGGCCCTCACAGAAAGCAGTCTGTCCCTGGTC +
Preference number: 1 (lower is better)
Translates to: IPRAPSGAVSTDPRA*RISWALTESSLSLV
Trigger: GACCAGGGACAGACTGCTTTCTGTGAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGGGGCTCTGGGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTaGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGC +
Preference number: 1 (lower is better)
Translates to: LCEPACECSDTQSPK*GSQHGPKGLAHILG
Trigger: GCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 90 bp TCACAGTGCCTGCCCGTGGAGGCTTCCAGGGTGCAACAGAACCCCTaGGCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAG +
Preference number: 1 (lower is better)
Translates to: SQCLPVEASRVQQNP*ALLMPTSKATHPLK
Trigger: CTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGCTCAGGGGTTCTGTTGCACCCTGGAAGCCTCCACGGGCAGGCACTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 90 bp CAAGGGGGAGAATTCACAGTGTTCGGTGGTGGTAGGTGCGAGAGCTaGAAGTGTACAGCGTCTACGCTGCCGCCCGCCCAAGAGGAGCAG +
Preference number: 1 (lower is better)
Translates to: QGGEFTVFGGGRCES*KCTASTLPPAQEEQ
Trigger: CTGCTCCTCTTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTACCACCACCGAACACTGTGAATTCTCCCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 90 bp GGGTGCCTCTTCAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTaGTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGCTG +
Preference number: 1 (lower is better)
Translates to: GCLFKDSAPPSQLLS*CDGTASPFGGVRRL
Trigger: CAGCCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTGAAGAGGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 90 bp CTGCAGGCCGGCTGTGAGCAGAGTGCTGGGGACTCTGGCACTGGGTaGTCACAGTGGTTGGTTGGTTCAGGAGAGGTGAGAACAGTCAGC +
Preference number: 1 (lower is better)
Translates to: LQAGCEQSAGDSGTG*SQWLVGSGEVRTVS
Trigger: GCTGACTGTTCTCACCTCTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCTGCTCACAGCCGGCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 90 bp ACCGCCTTCTCTTCCGACCCACTGAGCTGCACCCAAGTTCCGTCCTaGGGACAGAGGCTATGCAGGCTGGCCTCTGAACCAACCTCAGCT +
Preference number: 1 (lower is better)
Translates to: TAFSSDPLSCTQVPS*GQRLCRLASEPTSA
Trigger: AGCTGAGGTTGGTTCAGAGGCCAGCCTGCATAGCCTCTGTCCTCAGGACGGAACTTGGGTGCAGCTCAGTGGGTCGGAAGAGAAGGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 90 bp CTCAGTGAGCTAGACTCCAGAGCCAGGCCCAAGGCTGCCAGGCCTTaGGACTCCATGGCGAAGATAGAGGGGCTGTCCACACACATGCCA +
Preference number: 1 (lower is better)
Translates to: LSELDSRARPKAARP*DSMAKIEGLSTHMP
Trigger: TGGCATGTGTGTGGACAGCCCCTCTATCTTCGCCATGGAGTCTCAAGGCCTGGCAGCCTTGGGCCTGGCTCTGGAGTCTAGCTCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 90 bp GACGGGCACCAGCATGTGCGCAGTGGCAGCGCAGTCTACTCTGGATaGTTTAGGGTTCCTGGTCAACTCTTGGAAGAAAGCCGGGGCCGA +
Preference number: 1 (lower is better)
Translates to: DGHQHVRSGSAVYSG*FRVPGQLLEESRGR
Trigger: TCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAACCCTAAAGCATCCAGAGTAGACTGCGCTGCCACTGCGCACATGCTGGTGCCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 90 bp TGCCTCTTCAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTaGGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGCTGAGG +
Preference number: 1 (lower is better)
Translates to: CLFKDSAPPSQLLSC*DGTASPFGGVRRLR
Trigger: CCTCAGCCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTGAAGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 90 bp TCACTTCTTGACCCTCTGGAATGCCAGTCCCATCTGCTAGCGGCCTaGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACG +
Preference number: 1 (lower is better)
Translates to: SLLDPLECQSHLLAA*SASPQPRQGSFCRT
Trigger: CGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGGGACTGGCATTCCAGAGGGTCAAGAAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR CCA 90 bp TCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTaGAGAGTGTCAGAAAGCTCCCAGAGGACAATGGAGGCCACTTGG +
Preference number: 1 (lower is better)
Translates to: SGACWTALSICDPPP*RVSESSQRTMEATW
Trigger: CCAAGTGGCCTCCATTGTCCTCTGGGAGCTTTCTGACACTCTCCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 90 bp CTTCAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATaGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGCTGAGGGAGGT +
Preference number: 1 (lower is better)
Translates to: LQRLSSTIPASELLR*DGLSFRRSQEAEGG
Trigger: ACCTCCCTCAGCCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 90 bp ACACACATGCCACCCACCTCCTTGGAGGGGAAGGCCCATCAGGACTaGGACACCTGCTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCC +
Preference number: 1 (lower is better)
Translates to: THMPPTSLEGKAHQD*DTCCVSQPVSVQIP
Trigger: GGGTATCTGAACACTCACAGGCTGGCTCACACAGCAGGTGTCTCAGTCCTGATGGGCCTTCCCCTCCAAGGAGGTGGGTGGCATGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 90 bp GAATGGGGTGCCTCTTCAAAGACTCAGCTCCACCATCCCAGCTTCTaGGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGA +
Preference number: 1 (lower is better)
Translates to: EWGASSKTQLHHPSF*AAAMGRPLLSEESG
Trigger: TCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTGAAGAGGCACCCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 90 bp ACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGAGGTaGGAACAGTCAGCTAGCTCTTGGCAACGGTGCCCAGCTGTGGCT +
Preference number: 1 (lower is better)
Translates to: TLALGGHSGWLVQER*EQSASSWQRCPAVA
Trigger: AGCCACAGCTGGGCACCGTTGCCAAGAGCTAGCTGACTGTTCTCACCTCTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 90 bp GCTGATATGGTTGGGTTTGAAAAGCAGACGCACCGTACTCAATTCTaGCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTC +
Preference number: 1 (lower is better)
Translates to: ADMVGFEKQTHRTQF*LSLLRSPHPQATAF
Trigger: GAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTGCGTCTGCTTTTCAAACCCAACCATATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 90 bp ACCCGAATGGGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTaGCCCTGGTGTGACCTGCACTTGGAGAAGTGCAAAAGTAGGGGC +
Preference number: 1 (lower is better)
Translates to: TRMGSFTVQKRSDRV*PWCDLHLEKCKSRG
Trigger: GCCCCTACTTTTGCACTTCTCCAAGTGCAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCCCATTCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 90 bp CCCACTGCCTCTGGCTCAGTGACTCTGCTCAGGAAGGCACAAGGATaGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTGGGTTTTG +
Preference number: 1 (lower is better)
Translates to: PTASGSVTLLRKAQG*VGTQDPPSLSTWVL
Trigger: CAAAACCCAAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCAGAGTCACTGAGCCAGAGGCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 90 bp GCTGCCTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTaGTTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAAGACTCAG +
Preference number: 1 (lower is better)
Translates to: AAYGRRFLPVSCHPN*FAHTGEWGASSKTQ
Trigger: CTGAGTCTTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 90 bp GATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTGGGTTTTaGCTGCCCTGGCCGACTGGCTTTCCTAGTGGACTCTGCTATGTG +
Preference number: 1 (lower is better)
Translates to: DGWVRRTHPVYRLGF*LPWPTGFPSGLCYV
Trigger: CACATAGCAGAGTCCACTAGGAAAGCCAGTCGGCCAGGGCAGTCAAAACCCAAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 90 bp GGTGGGTACGCAGGACCCACCCAGTTTATCGACTTGGGTTTTGACTaGCCTGGCCGACTGGCTTTCCTAGTGGACTCTGCTATGTGTGCA +
Preference number: 1 (lower is better)
Translates to: GGYAGPTQFIDLGFD*PGRLAFLVDSAMCA
Trigger: TGCACACATAGCAGAGTCCACTAGGAAAGCCAGTCGGCCAGGGCAGTCAAAACCCAAGTCGATAAACTGGGTGGGTCCTGCGTACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 90 bp GCAGCGCAGTCTACTCTGGATGCTTTAGGGTTCCTGGTCAACTCTTaGAAGAAAGCCGGGGCCGAGAACTGTACAGCGGTAGCTCATGGG +
Preference number: 1 (lower is better)
Translates to: AAQSTLDALGFLVNS*KKAGAENCTAVAHG
Trigger: CCCATGAGCTACCGCTGTACAGTTCTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAACCCTAAAGCATCCAGAGTAGACTGCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 90 bp ATATGGTTGGGTTTGAAAAGCAGACGCACCGTACTCAATTCTGCCTaGGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTT +
Preference number: 1 (lower is better)
Translates to: IWLGLKSRRTVLNSA*ACSVPLTHRPPPSL
Trigger: AAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTGCGTCTGCTTTTCAAACCCAACCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 90 bp CTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTTaGCCACACTGGAGAATGGGGTGCCTCTTCAAAGACTCAGCTCCA +
Preference number: 1 (lower is better)
Translates to: LWAPLPSCLLPSKLI*PHWRMGCLFKDSAP
Trigger: TGGAGCTGAGTCTTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 90 bp CCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTTGCCCACACTaGAGAATGGGGTGCCTCTTCAAAGACTCAGCTCCACCATCCCAG +
Preference number: 1 (lower is better)
Translates to: PLPSCLLPSKLICPH*RMGCLFKDSAPPSQ
Trigger: CTGGGATGGTGGAGCTGAGTCTTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 90 bp GGCCTGGCGCTCTGGTGCTGGCTAAGACTTCCCAGCACTAGAAACTaGACACTTATCTTCATTTGGCCACTGAACCTTCCCATCGGGAAC +
Preference number: 1 (lower is better)
Translates to: GLALWCWLRLPSTRN*TLIFIWPLNLPIGN
Trigger: GTTCCCGATGGGAAGGTTCAGTGGCCAAATGAAGATAAGTGTGCAGTTTCTAGTGCTGGGAAGTCTTAGCCAGCACCAGAGCGCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 90 bp ACCTTCCCATCGGGAACCCCAGAAATGGACCGGAAACCTTTGAGTTaGTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTGTC +
Preference number: 1 (lower is better)
Translates to: TFPSGTPEMDRKPLS*SGASKAVFLREACV
Trigger: GACACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTTCCGGTCCATTTCTGGGGTTCCCGATGGGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 90 bp TGCACTGTCACCTTATTTAGCCTTTTCCACACCGGGGGCCAGGGATaGGCCCAGCAGCCAAGTGTAACCGTCAAACCGATAATTCAGAGA +
Preference number: 1 (lower is better)
Translates to: CTVTLFSLFHTGGQG*AQQPSVTVKPIIQR
Trigger: TCTCTGAATTATCGGTTTGACGGTTACACTTGGCTGCTGGGCCCATCCCTGGCCCCCGGTGTGGAAAAGGCTAAATAAGGTGACAGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 90 bp ACTGAACCTTCCCATCGGGAACCCCAGAAATGGACCGGAAACCTTTaGGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCT +
Preference number: 1 (lower is better)
Translates to: TEPSHREPQKWTGNL*VAQVPLRLCSYEKP
Trigger: AGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTTCCGGTCCATTTCTGGGGTTCCCGATGGGAAGGTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 90 bp GGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGGGACCTaGTTGACCTATGCCAGGAAAGCTCGGAGCCTGCTAAAGTGCCCA +
Preference number: 1 (lower is better)
Translates to: GKRSVAEAWIIHPGT*LTYARKARSLLKCP
Trigger: TGGGCACTTTAGCAGGCTCCGAGCTTTCCTGGCATAGGTCAATCAGGTCCCAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 90 bp CTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCAACTTTaGCTCTCAAATCCACAGCAGTTTCCCCTGCATTTCTACTCTAGT +
Preference number: 1 (lower is better)
Translates to: LKCPQEELGTQLSQL*LSNPQQFPLHFYSS
Trigger: ACTAGAGTAGAAATGCAGGGGAAACTGCTGTGGATTTGAGAGGCAAAGTTGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 90 bp AATTCAAATTCACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTaGAGCCTGGATTATTCATCCTGGGACCTGATTGACCTATGCCAG +
Preference number: 1 (lower is better)
Translates to: NSNSQPLLAGKEECC*SLDYSSWDLIDLCQ
Trigger: CTGGCATAGGTCAATCAGGTCCCAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGTGAATTTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 90 bp CTCCCTGCACATACATACCAACAAAGAATTCAAATTCACAGCCTTTaGTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCAT +
Preference number: 1 (lower is better)
Translates to: LPAHTYQQRIQIHSL*WLGKRSVAEAWIIH
Trigger: ATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGTGAATTTGAATTCTTTGTTGGTATGTATGTGCAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 90 bp ACAGCCCCACTTCTGATTTCTGGCCAACCACATGGGTTAAGAATGTaGCTAACAGTACTCCCTGCACATACATACCAACAAAGAATTCAA +
Preference number: 1 (lower is better)
Translates to: TAPLLISGQPHGLRM*LTVLPAHTYQQRIQ
Trigger: TTGAATTCTTTGTTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTGGCCAGAAATCAGAAGTGGGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 90 bp CACATACATACCAACAAAGAATTCAAATTCACAGCCTTTGCTGGCTaGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGGGA +
Preference number: 1 (lower is better)
Translates to: HIHTNKEFKFTAFAG*ERGVLLKPGLFILG
Trigger: TCCCAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGTGAATTTGAATTCTTTGTTGGTATGTATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 90 bp CCTGCACATACATACCAACAAAGAATTCAAATTCACAGCCTTTGCTaGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCT +
Preference number: 1 (lower is better)
Translates to: PAHTYQQRIQIHSLC*LGKRSVAEAWIIHP
Trigger: AGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGTGAATTTGAATTCTTTGTTGGTATGTATGTGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 90 bp AGATTAAATAACATTTTCATTACAGTTCAGTCCATTGCCACACCATaGGCAACAATACTTCTGAGCTGCTTTCTGCTGGCCTGGGCATCT +
Preference number: 1 (lower is better)
Translates to: RLNNIFITVQSIATP*ATILLSCFLLAWAS
Trigger: AGATGCCCAGGCCAGCAGAAAGCAGCTCAGAAGTATTGTTGCTCATGGTGTGGCAATGGACTGAACTGTAATGAAAATGTTATTTAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 90 bp AAACCAAAGCTGGAAGCCCAGAAATATTTACACTCTCTTGGGTACTaGGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACC +
Preference number: 1 (lower is better)
Translates to: KPKLEAQKYLHSLGY*GQSMLLHRLVMFGT
Trigger: GGTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGAGAGTGTAAATATTTCTGGGCTTCCAGCTTTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 90 bp AATAAAGATGATATAGCAGCTTCAAGCAGAAGAAACACCTATGGATaGTCTAAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCT +
Preference number: 1 (lower is better)
Translates to: NKDDIAASSRRNTYG*SKHKRQLEECIVVS
Trigger: AGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTTAGATCATCCATAGGTGTTTCTTCTGCTTGAAGCTGCTATATCATCTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 90 bp AATAACAAAACCAAAGCTGGAAGCCCAGAAATATTTACACTCTCTTaGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTT +
Preference number: 1 (lower is better)
Translates to: NNKTKAGSPEIFTLS*VLRSVYVVAQIGYV
Trigger: AACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGAGAGTGTAAATATTTCTGGGCTTCCAGCTTTGGTTTTGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 90 bp TGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTaGTACCTCAAAGTGTTTATAATTCAGACAAAATCAGACAGATTA +
Preference number: 1 (lower is better)
Translates to: WVLRSVYVVAQIGYV*YLKVFIIQTKSDRL
Trigger: TAATCTGTCTGATTTTGTCTGAATTATAAACACTTTGAGGTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 90 bp AGAAATATTTACACTCTCTTGGGTACTGAGGTCAGTCTATGTTGTTaGACAGATTGGTTATGTTTGGTACCTCAAAGTGTTTATAATTCA +
Preference number: 1 (lower is better)
Translates to: RNIYTLLGTEVSLCC*TDWLCLVPQSVYNS
Trigger: TGAATTATAAACACTTTGAGGTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGAGAGTGTAAATATTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAAGGCGATGGCGGTGGTaGCAGTGGGAGCCTATGCCC +
Preference number: 2 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPRRWRW*QWEPMP
Trigger: GGGCATAGGCTCCCACTGCCACCACCGCCATCGCCT...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR-3UTR TCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCTTCAGAGCTGCAGGTaGGGCGATGGCGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRLQSCR*GDGGGG
Trigger: GCCACCACCGCCATCGCCTCACCTGCAGCTCTGAAG...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGCCCTCCTTCAGAGCTGCAGGTaGGGCGATGGCGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: PSGAVSTDPRAWRISWALLQSCR*GDGGGG
Trigger: GCCACCACCGCCATCGCCTCACCTGCAGCTCTGAAG...GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp AGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTGGAAGGTGCGCCGTGTGTaGAGGGCACAGGCCGCCTCC +
Preference number: 2 (lower is better)
Translates to: RWSGACWTALSICDPPPWKVRRV*RAQAAS
Trigger: GGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTT...CCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp CGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTCCTGTGTCTAGCCCCTaGAAGGGACAGGAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: RRQYGAGQPRAVLRSLTGPVSSP*KGQEVG
Trigger: CCCAACTTCCTGTCCCTTTCAGGGGCTAGACACAGG...ACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTACAGCGTCTACGCTaGCGCCCGCCCAAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDVQRLR*RPPKRS
Trigger: GCTCCTCTTGGGCGGGCGGCAGCGTAGACGCTGTAC...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCGGGGTTCACAGTGCCTaGCCGTGGAGGCTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: QPWGAISAVGILLETALPGVHSA*PWRLPG
Trigger: CCCTGGAAGCCTCCACGGGCAGGCACTGTGAACCCC...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTACAGTGGGGTGGGGCTaGAGGCCGGCTGTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRTVGWG*RPAVSR
Trigger: TCTGCTCACAGCCGGCCTGCAGCCCCACCCCACTGT...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCTGCAGGTGAGGCGATaGCGGTGGTGGCAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRLQVRR*RWWQWE
Trigger: CTCCCACTGCCACCACCGCCATCGCCTCACCTGCAG...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR-3UTR CCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGTTCTGCAGGACGTGGTaGTGGCAGGCCCAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRFCRTW*WQAQAK
Trigger: CTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAA...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCACCATCCCAGCTTCTaGGCTGCTGCGATGGGACGG +
Preference number: 2 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRHHPSF*AAAMGR
Trigger: CCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTG...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAAGGCGATGGCGGTGGTaGCAGTGGGAGCCTATGCCC +
Preference number: 2 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVARRWRW*QWEPMP
Trigger: GGGCATAGGCTCCCACTGCCACCACCGCCATCGCCT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR-3UTR CCA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCAGGCCCAGGCCAAGTaGCCAAGAGGAGGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAQAQAK*PRGGPA
Trigger: TGCAGGACCTCCTCTTGGCCACTTGGCCTGGGCCTG...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp GTGTGCAGGGCACAGGCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCCAGGCCCAGGCCAAGTaGCCAAGAGGAGGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: VCRAQAASSLVLRKAFLLQAQAK*PRGGPA
Trigger: TGCAGGACCTCCTCTTGGCCACTTGGCCTGGGCCTG...GAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTTTCTGCAGGACGTGGTaGTGGCAGGCCCAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRFCRTW*WQAQAK
Trigger: CTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAA...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACTCGTTCTGCAGGACGTaGTGGTGGCAGGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: RASRELPLVSDAGGPRRDSFCRT*WWQAQA
Trigger: GGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGA...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTACGGACCCAAGGGCCTaGCGCATATCTTGGGCCCTC +
Preference number: 2 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRTDPRA*RISWAL
Trigger: GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGT...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACTACCGCAGAGAGAGCTaGGTCCCAGGCCCCAACCTG +
Preference number: 2 (lower is better)
Translates to: RASRELPLVSDAGGPRRDYRRES*VPGPNL
Trigger: CAGGTTGGGGCCTGGGACTCAGCTCTCTCTGCGGTA...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp AGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTGGGGCCTTCCTCCTCAGTaGGCTAGACTCCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: RWSGACWTALSICDPPPWGLPPQ*ARLQSQ
Trigger: CTGGCTCTGGAGTCTAGCTCACTGAGGAGGAAGGCC...CCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp GCTTTCCTAGTGGACTCTGCTATGTGTGCACGGCTGCCTATGGGCGCCGCTTCCGAGGAGTCAGGAGGCTaGGGGAGGTGGTCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: AFLVDSAMCARLPMGAASEESGG*GRWSGA
Trigger: TGCCCCTGACCACCTCCCTCAGCCTCCTGACTCCTC...GGAAGCGGCGCCCATAGGCAGCCGTGCACACATAGCAGAGTCCACTAGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTGCTAGCGGCCTGGAGTaGTTCTCCACAGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAASGLE*FSTAKA
Trigger: TGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGTGCTGGAGACTGCCCTaGCCGTCGGGGTTCACAGTG +
Preference number: 2 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRCWRLP*PSGFTV
Trigger: CACTGTGAACCCCGACGGGCAGGGCAGTCTCCAGCA...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGGATCCTGCTGGAGACTaGCCTGCCCGTCGGGGTTCA +
Preference number: 2 (lower is better)
Translates to: PSASGLECFSTAKAGLVLDPAGD*PARRGS
Trigger: TGAACCCCGACGGGCAGGGCAGTCTCCAGCAGGATC...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGCCCTCCTGGGGAGCTATCAGTaGCGTTGGGATCCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: PSGAVSTDPRAWRISWALLGSYQ*RWDPAG
Trigger: TCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAG...GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp GCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTAGACTCCTGGCGGTGGTGGCAGTaGGAGCCTATGCCCCCACGT +
Preference number: 2 (lower is better)
Translates to: AASSLVLRKAFLLSELDSWRWWQ*EPMPPR
Trigger: ACGTGGGGGCATAGGCTCCCACTGCCACCACCGCCA...GGAGTCTAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp GCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTAGACTCCTGCAGGACGTGGTGGTaGCAGGCCCAGGCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: AASSLVLRKAFLLSELDSCRTWW*QAQAKW
Trigger: CCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCA...GGAGTCTAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCATCTGCTAGCGGCCTaGAGTGCTTCTCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRHLLAA*SASPQP
Trigger: TGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATG...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CAA 90 bp CCCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTaGGGCCCTCACAGAAAGCAGTCTGTCCCTGGTCCAGCCACATCA +
Preference number: 2 (lower is better)
Translates to: PKWGSQHGPKGLAHI*GPHRKQSVPGPATS
Trigger: TGATGTGGCTGGACCAGGGACAGACTGCTTTCTGTGAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CAA 90 bp GGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTaGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTAGACTCCAGA +
Preference number: 2 (lower is better)
Translates to: GKKVRRVCRAQAASS*VLRKAFLLSELDSR
Trigger: TCTGGAGTCTAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACGGTCTGCCCCTGGTGTaGCCTGCACTTGGAGAAGTG +
Preference number: 2 (lower is better)
Translates to: RASRELPLVSDAGGPRRDGLPLV*PALGEV
Trigger: CACTTCTCCAAGTGCAGGTCACACCAGGGGCAGACC...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCGCTGTCTATCTGTaGTCCCCCACCGTGGAGAGT +
Preference number: 2 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAGAVYL*SPTVES
Trigger: ACTCTCCACGGTGGGGGATCACAGATAGACAGCGCC...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGCTAGCGGCCTGGAGTaGTTCTCCACAGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAASGLE*FSTAKA
Trigger: TGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR-3UTR GCA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGTGGAGGCTTCCAGGGTaGAACAGAACCCCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRWRLPG*NRTPEP
Trigger: GGGCTCAGGGGTTCTGTTGCACCCTGGAAGCCTCCA...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTGGGGCAGTGTGCCGTTGGGATCCTaGTGGAGACTGCCCTGCCCG +
Preference number: 2 (lower is better)
Translates to: LCEPACECSDTQSPKWGSVPLGS*WRLPCP
Trigger: CGGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCAC...ACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCAGTGAGGCGATGGCGGTaGTGGCAGTGGGAGCCTATG +
Preference number: 2 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPVRRWR*WQWEPM
Trigger: CATAGGCTCCCACTGCCACCACCGCCATCGCCTCAC...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCTCGTTCTGCAGGACGTaGTGGTGGCAGGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGSFCRT*WWQAQA
Trigger: GGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGA...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp ACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGCCAGCCACCGGGGGCCAGGGATaGGCCCAGCAGCCAAGTGTA +
Preference number: 2 (lower is better)
Translates to: TKRAAGKLKKQRRTGMPATGGQG*AQQPSV
Trigger: TACACTTGGCTGCTGGGCCCATCCCTGGCCCCCGGT...GGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCCACAGTGCCTGCCCGTaGAGGCTTCCAGGGTGCAAC +
Preference number: 2 (lower is better)
Translates to: QRLSSTIPASELLRWDGLHSACP*RLPGCN
Trigger: GTTGCACCCTGGAAGCCTCCACGGGCAGGCACTGTG...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGCCGTTGGGATCCTGCTaGAGACTGCCCTGCCCGTCG +
Preference number: 2 (lower is better)
Translates to: RVLGTLALGGHSGWLVQEPLGSC*RLPCPS
Trigger: CGACGGGCAGGGCAGTCTCCAGCAGGATCCCAACGG...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAAGGCACAAGGATGGGTaGGTACGCAGGACCCACCCA +
Preference number: 2 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVARHKDG*VRRTHP
Trigger: TGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCTGCAGGCGGAGGTaGGGCCTGGGTCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: APKATRGSIDALSPYLAFSCRRR*GLGLQS
Trigger: GCTCTGAAGACCCAGGCCTCACCTCCGCCTGCAGGA...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCTCTCTTCCGACCCACTaGGCTGCACCCAAGTTCCGT +
Preference number: 2 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATSLPTH*AAPKFR
Trigger: ACGGAACTTGGGTGCAGCTCAGTGGGTCGGAAGAGA...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGAAGGCTGCCAGGCCTTaGGACTCCATGGCGAAGATA +
Preference number: 2 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRKAARP*DSMAKI
Trigger: TATCTTCGCCATGGAGTCTCAAGGCCTGGCAGCCTT...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCAGGTGGTCAGGGGCATaGTGGACGGCGCTGTCTATC +
Preference number: 2 (lower is better)
Translates to: QRLSSTIPASELLRWDGLRWSGA*WTALSI
Trigger: GATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp TTGAGACTCCATGGCGAAGATAGAGGGGCTGTCCACACACATGCCACCCACCTCCTGCAGGTGAGGCGATaGCGGTGGTGGCAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: LRLHGEDRGAVHTHATHLLQVRR*RWWQWE
Trigger: CTCCCACTGCCACCACCGCCATCGCCTCACCTGCAG...GAGGTGGGTGGCATGTGTGTGGACAGCCCCTCTATCTTCGCCATGGAGTCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGCATCTGCTAGCGGCCTaGAGTGCTTCTCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRHLLAA*SASPQP
Trigger: TGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATG...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGCCCTCCACTTCTTGACCCTCTaGAATGCCAGTCCCATCTGC +
Preference number: 2 (lower is better)
Translates to: PSGAVSTDPRAWRISWALHFLTL*NASPIC
Trigger: GCAGATGGGACTGGCATTCCAGAGGGTCAAGAAGTG...GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCGAGTGCTGGGGACTCTaGCACTGGGTGGTCACAGTG +
Preference number: 2 (lower is better)
Translates to: QRLSSTIPASELLRWDGLECWGL*HWVVTV
Trigger: CACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTC...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp GGCTGCCTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTTGCTGCCACCCACCTCCTTaGAGGGGAAGGCCCATCAGG +
Preference number: 2 (lower is better)
Translates to: GCLWAPLPSCLLPSKLICCHPPP*RGRPIR
Trigger: CCTGATGGGCCTTCCCCTCCAAGGAGGTGGGTGGCA...GCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGAGGAAGGCACAAGGATaGGTGGGTACGCAGGACCCA +
Preference number: 2 (lower is better)
Translates to: PSASGLECFSTAKAGLVLRKAQG*VGTQDP
Trigger: TGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCT...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTTCTTCATTTGGCCACTaGACCTTCCCATCGGGAACC +
Preference number: 2 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSASSFGH*TFPSGT
Trigger: GGTTCCCGATGGGAAGGTTCAGTGGCCAAATGAAGA...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGGACCTGATTGACCTATaGCAGGAAAGCTCGGAGCCT +
Preference number: 2 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRDLIDL*QESSEP
Trigger: AGGCTCCGAGCTTTCCTGGCATAGGTCAATCAGGTC...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCCTATGTGTGCACGGCTaGCTATGGGCGCCGCTTCCT +
Preference number: 2 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGLCVHG*LWAPLP
Trigger: AGGAAGCGGCGCCCATAGGCAGCCGTGCACACATAG...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp AGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTGGCTTGGCATCAGCAGCTaGAAGGAGAGAGTTGAGGAC +
Preference number: 2 (lower is better)
Translates to: RWSGACWTALSICDPPPWLGISS*KERVED
Trigger: GTCCTCAACTCTCTCCTTCCAGCTGCTGATGCCAAG...CCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCCAGTCAGCTAGCTCTTaGCAACGGTGCCCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: QRLSSTIPASELLRWDGLQSASS*QRCPAV
Trigger: CACAGCTGGGCACCGTTGCCAAGAGCTAGCTGACTG...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp GCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTAGACTCCTGGGGACTCTGGCACTaGGTGGTCACAGTGGTTGGT +
Preference number: 2 (lower is better)
Translates to: AASSLVLRKAFLLSELDSWGLWH*VVTVVG
Trigger: ACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCA...GGAGTCTAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTACCCAGAGCCCCAAGTaGGGCAGTCAGCACGGACCC +
Preference number: 2 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLTQSPK*GSQHGP
Trigger: GGGTCCGTGCTGACTGCCCCACTTGGGGCTCTGGGT...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCATTCCGCAGCACAGTGTaGTTCCTCAGTGGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAFRSTV*FLSGSA
Trigger: AGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAA...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCATGGACCGGAAACCTTTaGGTTGCTCAGGTGCCTCTA +
Preference number: 2 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAWTGNL*VAQVPL
Trigger: TAGAGGCACCTGAGCAACTCAAAGGTTTCCGGTCCA...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCTGGAAGGAGAGAGTTaGGGACAGCAGAAAGATCGG +
Preference number: 2 (lower is better)
Translates to: PSASGLECFSTAKAGLVLLEGES*GQQKDR
Trigger: CCGATCTTTCTGCTGTCCTCAACTCTCTCCTTCCAG...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTGGGGCAGTACCCCTGAGCCCTCTTaGTGCCCACCTCAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: LCEPACECSDTQSPKWGSTPEPS*CPPQRQ
Trigger: TTGCCTTTGAGGTGGGCATCAAGAGGGCTCAGGGGT...ACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGCAGCTCTGTTCTGTaGGGGAAGAAGGTGCGCCGT +
Preference number: 2 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGSSSVL*GKKVRR
Trigger: ACGGCGCACCTTCTTCCCTCACAGAACAGAGCTGCT...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCTATCGACTTGGGTTTTaGCTGCCCTGGCCGACTGGC +
Preference number: 2 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGYRLGF*LPWPTG
Trigger: GCCAGTCGGCCAGGGCAGTCAAAACCCAAGTCGATA...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGAGGACTCTGCTATGTGTaGACGGCTGCCTATGGGCGC +
Preference number: 2 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRGLCYV*TAAYGR
Trigger: GCGCCCATAGGCAGCCGTGCACACATAGCAGAGTCC...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCATTTCCTAGTGGACTCTaGTATGTGTGCACGGCTGCC +
Preference number: 2 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAFPSGL*YVCTAA
Trigger: GGCAGCCGTGCACACATAGCAGAGTCCACTAGGAAA...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp AAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCACTGGCGGTGGTGGCAGTaGGAGCCTATGCCCCCACGT +
Preference number: 2 (lower is better)
Translates to: KGHAGEHRCTVTLFSLFHWRWWQ*EPMPPR
Trigger: ACGTGGGGGCATAGGCTCCCACTGCCACCACCGCCA...GTGGAAAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCACACTTCTTGACCCTCTaGAATGCCAGTCCCATCTGC +
Preference number: 2 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAHFLTL*NASPIC
Trigger: GCAGATGGGACTGGCATTCCAGAGGGTCAAGAAGTG...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR-3UTR CCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCGCCTGGCGCATATCTTaGGCCCTCACAGAAAGCAGT +
Preference number: 2 (lower is better)
Translates to: QRLSSTIPASELLRWDGLAWRIS*ALTESS
Trigger: ACTGCTTTCTGTGAGGGCCCAAGATATGCGCCAGGC...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CAA 90 bp GGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTaGGGTTTTGACTGCCCTGGCCGACTGGCTTTCCTAGTGGACTCT +
Preference number: 2 (lower is better)
Translates to: GTRMGGYAGPTQFID*GFDCPGRLAFLVDS
Trigger: AGAGTCCACTAGGAAAGCCAGTCGGCCAGGGCAGTCAAAACCCAAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATTCCTGCAGGCGGAGGTaGGGCCTGGGTCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNSCRRR*GLGLQS
Trigger: GCTCTGAAGACCCAGGCCTCACCTCCGCCTGCAGGA...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTGGGGCAGTGGTAGGTGCGAGAGCTaGAAGTGTACAGCGTCTACG +
Preference number: 2 (lower is better)
Translates to: LCEPACECSDTQSPKWGSGRCES*KCTAST
Trigger: CGTAGACGCTGTACACTTGCAGCTCTCGCACCTACC...ACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGAAGCTCTTGGCAACGGTaGCCAGCTGTGGCTCAGTAC +
Preference number: 2 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRSSWQR*PAVAQY
Trigger: GTACTGAGCCACAGCTGGGCACCGTTGCCAAGAGCT...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTGGCTGTCCACACACATaGCACCCACCTCCTTGGAGG +
Preference number: 2 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLGCPHT*HPPPWR
Trigger: CCTCCAAGGAGGTGGGTGGCATGTGTGTGGACAGCC...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp ATTTGGCCACTGAACCTTCCCATCGGGAACCCCAGAAATGGACCGGAAACCTTTTGCAGGACGTGGTGGTaGCAGGCCCAGGCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: IWPLNLPIGNPRNGPETFCRTWW*QAQAKW
Trigger: CCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCA...AAAGGTTTCCGGTCCATTTCTGGGGTTCCCGATGGGAAGGTTCAGTGGCCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp GCTTTCCTAGTGGACTCTGCTATGTGTGCACGGCTGCCTATGGGCGCCGCTTCCACTGGGTGGTCACAGTaGTTGGTTGGTTCAGGAGAG +
Preference number: 2 (lower is better)
Translates to: AFLVDSAMCARLPMGAASTGWSQ*LVGSGE
Trigger: CTCTCCTGAACCAACCAACCACTGTGACCACCCAGT...GGAAGCGGCGCCCATAGGCAGCCGTGCACACATAGCAGAGTCCACTAGGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CAA 90 bp GGCAGCGCAGTCTACTCTGGATGCTTTAGGGTTCCTGGTCAACTCTaGGAAGAAAGCCGGGGCCGAGAACTGTACAGCGGTAGCTCATGG +
Preference number: 2 (lower is better)
Translates to: GSAVYSGCFRVPGQL*EESRGRELYSGSSW
Trigger: CCATGAGCTACCGCTGTACAGTTCTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAACCCTAAAGCATCCAGAGTAGACTGCGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CAA 90 bp CCTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTaGCCCACACTGGAGAATGGGGTGCCTCTTCAAAGACTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: PMGAASFLSPAIQTD*PTLENGVPLQRLSS
Trigger: GGAGCTGAGTCTTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGTTCAGAGAATCAAAATaGGCCCCAATCACACAGGCT +
Preference number: 2 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRFRESK*APITQA
Trigger: AGCCTGTGTGATTGGGGCTCATTTTGATTCTCTGAA...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAATTCATCCTGGGACCTaGTTGACCTATGCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAIHPGT*LTYARK
Trigger: TTTCCTGGCATAGGTCAATCAGGTCCCAGGATGAAT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAAAGGCAGGGCTCGTTCTaGAGGACGTGGTGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKRQGSF*RTWWWQ
Trigger: CTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGACACTTATCTTCATTTaGCCACTGAACCTTCCCATC +
Preference number: 2 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRTLIFI*PLNLPI
Trigger: GATGGGAAGGTTCAGTGGCCAAATGAAGATAAGTGT...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp AAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCACAGAGGCCTGGCGCTCTaGTGCTGGCTAAGACTTCCC +
Preference number: 2 (lower is better)
Translates to: KGHAGEHRCTVTLFSLFHRGLAL*CWLRLP
Trigger: GGGAAGTCTTAGCCAGCACCAGAGCGCCAGGCCTCT...GTGGAAAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAAGACAGGGTCTGCCCCTaGTGTGACCTGCACTTGGAG +
Preference number: 2 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSEDRVCP*CDLHLE
Trigger: CTCCAAGTGCAGGTCACACCAGGGGCAGACCCTGTC...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGATGTGATCCCCCACCGTaGAGAGTGTCAGAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRCDPPP*RVSESS
Trigger: GGAGCTTTCTGACACTCTCCACGGTGGGGGATCACA...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATGTGCAACAGAACCCCTaGGCCCTCTTGATGCCCACC +
Preference number: 2 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNVQQNP*ALLMPT
Trigger: GGTGGGCATCAAGAGGGCTCAGGGGTTCTGTTGCAC...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCAGGCAGGGCTCGTTCTaGAGGACGTGGTGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: TAFAGWERGVLLKPGLFIRQGSF*RTWWWQ
Trigger: CTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAATCCCAGCTTCTGAGCTaGTGCGATGGGACGGCCTCT +
Preference number: 2 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKSQLLS*CDGTAS
Trigger: AGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGA...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGTTCTGGCCAACCACATaGGTTAAGAATGTGCCTAAC +
Preference number: 2 (lower is better)
Translates to: PSASGLECFSTAKAGLVLFWPTT*VKNVPN
Trigger: GTTAGGCACATTCTTAACCCATGTGGTTGGCCAGAA...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATGTGCAGGTGGGGCCTTaGCATCAGCAGCTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNVQVGP*HQQLEG
Trigger: TCCTTCCAGCTGCTGATGCCAAGGCCCCACCTGCAC...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGATCCTGCCATCCAAACTaGTTTGCCCACACTGGAGAA +
Preference number: 2 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRSCHPN*FAHTGE
Trigger: TTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGA...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCAAAAGGGACAGGAAGTTaGGCAGTTCATAAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPKGTGS*AVHKEQ
Trigger: CTGCTCTTTATGAACTGCCCAACTTCCTGTCCCTTT...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGAGCAGAAAGATCGGATaGCAAAGGCACAGTGAGACT +
Preference number: 2 (lower is better)
Translates to: RVLGTLALGGHSGWLVQESRKIG*QRHSET
Trigger: AGTCTCACTGTGCCTTTGCCATCCGATCTTTCTGCT...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAAACAATGGAGGCCACTTaGTCCAGGTCCCTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKTMEAT*SRSLSS
Trigger: GGAGGACAGGGACCTGGACCAAGTGGCCTCCATTGT...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR TCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTATGCAGGCTGGCCTCTaGACCAACCTCAGCTCCCCT +
Preference number: 2 (lower is better)
Translates to: KPLSCSGASKAVFLREACMQAGL*TNLSSP
Trigger: AGGGGAGCTGAGGTTGGTTCAGAGGCCAGCCTGCAT...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATGTCCAGCCACATCACTaGGCTCAAGGTCTCACAAGG +
Preference number: 2 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNVQPHH*AQGLTR
Trigger: CCTTGTGAGACCTTGAGCTCAGTGATGTGGCTGGAC...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp ATTTGGCCACTGAACCTTCCCATCGGGAACCCCAGAAATGGACCGGAAACCTTTAGAGGCTATGCAGGCTaGCCTCTGAACCAACCTCAG +
Preference number: 2 (lower is better)
Translates to: IWPLNLPIGNPRNGPETFRGYAG*PLNQPQ
Trigger: CTGAGGTTGGTTCAGAGGCCAGCCTGCATAGCCTCT...AAAGGTTTCCGGTCCATTTCTGGGGTTCCCGATGGGAAGGTTCAGTGGCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAAACAGCCTTTGCTGGCTaGGAAAGAGGAGTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSETAFAG*ERGVLL
Trigger: CAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGACCAGCATGTGCGCAGTaGCAGCGCAGTCTACTCTGG +
Preference number: 2 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGPACAQ*QRSLLW
Trigger: CCAGAGTAGACTGCGCTGCCACTGCGCACATGCTGG...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp AAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCACGAACAAGTCACTTCTTaGCCCTCTGGAATGCCAGTC +
Preference number: 2 (lower is better)
Translates to: KGHAGEHRCTVTLFSLFHEQVTS*PSGMPV
Trigger: GACTGGCATTCCAGAGGGTCAAGAAGTGACTTGTTC...GTGGAAAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp AAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCACGCTTTTCCTATTCTCTaGCACAACGCAGGCAGTACG +
Preference number: 2 (lower is better)
Translates to: KGHAGEHRCTVTLFSLFHAFPIL*HNAGST
Trigger: CGTACTGCCTGCGTTGTGTCAGAGAATAGGAAAAGC...GTGGAAAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTCACCGTACTCAATTCTaGCTGAGCCTGCTCCGTTCC +
Preference number: 2 (lower is better)
Translates to: KPLSCSGASKAVFLREACHRTQF*LSLLRS
Trigger: GGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGCGGAAACCTTTGAGTTaGTCAGGTGCCTCTAAGGCT +
Preference number: 2 (lower is better)
Translates to: AFAGWERGVLLKPGLFILRKPLS*SGASKA
Trigger: AGCCTTAGAGGCACCTGAGCAACTCAAAGGTTTCCG...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACAGGGACGCAGAGAGCTaGACACGCAGAGCCTGTCGG +
Preference number: 2 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYRDAES*TRRACR
Trigger: CCGACAGGCTCTGCGTGTGCAGCTCTCTGCGTCCCT...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATCCATCCAAACTGATTTaGCCACACTGGAGAATGGGG +
Preference number: 2 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNPSKLI*PHWRMG
Trigger: CCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGG...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR GCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACAAGTGGAGGAGGGCCTaGCTCTACCGCAGAGAGAGC +
Preference number: 2 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYKWRRA*LYRRES
Trigger: GCTCTCTCTGCGGTAGAGGCAGGCCCTCCTCCACTT...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACGTACTCAATTCTGCCTaGGCCTGCTCCGTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYVLNSA*ACSVPL
Trigger: GAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTAC...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACCTTGACCCTCTGGAATaGCAGTCCCATCTGCTAGCG +
Preference number: 2 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYLDPLE*QSHLLA
Trigger: CGCTAGCAGATGGGACTGGCATTCCAGAGGGTCAAG...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR GCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACGCGGGGGAGCATCGATaGACTGTCACCTTATTTAGC +
Preference number: 2 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYAGEHR*TVTLFS
Trigger: GCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGC...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGAAAAACAATGTGTTCTaGACAAGTCACTTCTTGACC +
Preference number: 2 (lower is better)
Translates to: AFAGWERGVLLKPGLFILKNNVF*TSHFLT
Trigger: GGTCAAGAAGTGACTTGTTCAGAACACATTGTTTTT...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR TCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAAAAAAACAATGTGTTCTaGACAAGTCACTTCTTGACC +
Preference number: 2 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKKNNVF*TSHFLT
Trigger: GGTCAAGAAGTGACTTGTTCAGAACACATTGTTTTT...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACAGTGTTGCTGAAGCCTaGATTATTCATCCTGGGACC +
Preference number: 2 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYSVAEA*IIHPGT
Trigger: GGTCCCAGGATGAATAATCCAGGCTTCAGCAACACT...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAAAGACAAATCACAAATTaGCAAGTAGCAACCTTAGCT +
Preference number: 2 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQRQITN*QVATLA
Trigger: AGCTAAGGTTGCTACTTGCCAATTTGTGATTTGTCT...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACCATTTGTCTAAAGATTaGCAGTATGACCTAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYHLSKD*QYDLEV
Trigger: AACCTCTAGGTCATACTGCCAATCTTTAGACAAATG...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CAA 90 bp TTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTaGGTACCTCAAAGTGTTTATAATTCAGACAAAATCAGACAGATT +
Preference number: 2 (lower is better)
Translates to: LGTEVSLCCCTDWLC*VPQSVYNSDKIRQI
Trigger: AATCTGTCTGATTTTGTCTGAATTATAAACACTTTGAGGTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 72 bp GAGCCCAGCCCAACCCTGGGGAGCTATCAGTGCCGTTaGGATCCTGCTGGAGACTGCCCTGCCCGTCGGGGT +
Preference number: 3 (lower is better)
Translates to: EPSPTLGSYQCR*DPAGDCPARRG
Trigger: ACCCCGACGGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTGGGCTGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 72 bp CTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTaGCCGTCGGGGTTCACAGTGCCTGCCCGTGGAGGC +
Preference number: 3 (lower is better)
Translates to: LSVPLGSCWRLP*PSGFTVPARGG
Trigger: GCCTCCACGGGCAGGCACTGTGAACCCCGACGGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 72 bp GGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTaGCCTGCCCGTCGGGGTTCACAGTGCCTGCCCGTG +
Preference number: 3 (lower is better)
Translates to: GSYQCRWDPAGD*PARRGSQCLPV
Trigger: CACGGGCAGGCACTGTGAACCCCGACGGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 72 bp TGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTaGAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGG +
Preference number: 3 (lower is better)
Translates to: WSASPQPRQGSF*RTWWWQAQAKW
Trigger: CCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR GCA 72 bp CAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATaGCAGCCTGCCCCAAAGGCCACGCGGGGGAGCATC +
Preference number: 3 (lower is better)
Translates to: QQESLRSRGAPG*QPAPKATRGSI
Trigger: GATGCTCCCCCGCGTGGCCTTTGGGGCAGGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 72 bp GTAGGTGCGAGAGCTGCAAGTGTACAGCGTCTACGCTaGCGCCCGCCCAAGAGGAGCAGGTCCCAGTGCAGG +
Preference number: 3 (lower is better)
Translates to: VGARAASVQRLR*RPPKRSRSQCR
Trigger: CCTGCACTGGGACCTGCTCCTCTTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 72 bp CCCAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTaGTGGAGACTGCCCTGCCCGTCGGGGTTCACAGTG +
Preference number: 3 (lower is better)
Translates to: PNPGELSVPLGS*WRLPCPSGFTV
Trigger: CACTGTGAACCCCGACGGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 72 bp AAGCTTAAGAAGCAGAGGCGCACCGGGATGCCAGCCTaGCCCAAAGGCCACGCGGGGGAGCATCGATGCACT +
Preference number: 3 (lower is better)
Translates to: KLKKQRRTGMPA*PKGHAGEHRCT
Trigger: AGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGCAGGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 72 bp AACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTaGAGACTGCCCTGCCCGTCGGGGTTCACAGTGCCT +
Preference number: 3 (lower is better)
Translates to: NPGELSVPLGSC*RLPCPSGFTVP
Trigger: AGGCACTGTGAACCCCGACGGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 72 bp GCCCCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTaGCGCATATCTTGGGCCCTCACAGAAAGCAGTCTG +
Preference number: 3 (lower is better)
Translates to: APSGAVSTDPRA*RISWALTESSL
Trigger: CAGACTGCTTTCTGTGAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CAA 90 bp AGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGTGCAGGTGGGGCCTaGGCATCAGCAGCTGGAAGG +
Preference number: 3 (lower is better)
Translates to: SSTIPASELLRWDGLSFRSAGGA*ASAAGR
Trigger: CCTTCCAGCTGCTGATGCCAAGGCCCCACCTGCACT...CCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CAA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGATGCCACCCACCTCCTaGGAGGGGAAGGCCCATCAG +
Preference number: 3 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRMPPTS*EGKAHQ
Trigger: CTGATGGGCCTTCCCCTCCAAGGAGGTGGGTGGCAT...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CAA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGGGCCTGGCGCATATCTaGGGCCCTCACAGAAAGCAG +
Preference number: 3 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRGLAHI*GPHRKQ
Trigger: CTGCTTTCTGTGAGGGCCCAAGATATGCGCCAGGCC...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 72 bp GACCCTCTGGAATGCCAGTCCCATCTGCTAGCGGCCTaGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTC +
Preference number: 3 (lower is better)
Translates to: DPLECQSHLLAA*SASPQPRQGSF
Trigger: GAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGGGACTGGCATTCCAGAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR CCA 72 bp GCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTaGGCCCTCACAGAAAGCAGTCTGTCCCTGGTCCAG +
Preference number: 3 (lower is better)
Translates to: AVSTDPRAWRIS*ALTESSLSLVQ
Trigger: CTGGACCAGGGACAGACTGCTTTCTGTGAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 72 bp CTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATaGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: LSSTIPASELLR*DGLSFRRSQEA
Trigger: AGCCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CAA 90 bp CGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTCTGATATGGTTGGGTTaGAAAAGCAGACGCACCGTA +
Preference number: 3 (lower is better)
Translates to: RRQYGAGQPRAVLRSLTGLIWLG*KSRRTV
Trigger: TACGGTGCGTCTGCTTTTCAAACCCAACCATATCAG...ACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CAA 90 bp GGGGAGGAAAGGGTTAACCAATGGGGCCTGCGGACGGTGGAGGAAATGGAAAGGCCCTCCATGCCTGCTTaGAGCACCCACAGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: GEERVNQWGLRTVEEMERPSMPA*STHSLQ
Trigger: CTGCAGGCTGTGGGTGCTCAAAGCAGGCATGGAGGG...CCTTTCCATTTCCTCCACCGTCCGCAGGCCCCATTGGTTAACCCTTTCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 72 bp CTGCCCGTGGAGGCTTCCAGGGTGCAACAGAACCCCTaGGCCCTCTTGATGCCCACCTCAAAGGCAACTCAC +
Preference number: 3 (lower is better)
Translates to: LPVEASRVQQNP*ALLMPTSKATH
Trigger: GTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGCTCAGGGGTTCTGTTGCACCCTGGAAGCCTCCACGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 72 bp GTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTaGTCCCCCACCGTGGAGAGTGTCAGAAAGCTCCCA +
Preference number: 3 (lower is better)
Translates to: VVRGMLDGAVYL*SPTVESVRKLP
Trigger: TGGGAGCTTTCTGACACTCTCCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 72 bp TCTGGAATGCCAGTCCCATCTGCTAGCGGCCTGGAGTaGTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: SGMPVPSASGLE*FSTAKAGLVLQ
Trigger: CTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGGGACTGGCATTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR GCA 72 bp TGGCCGACTGGCTTTCCTAGTGGACTCTGCTATGTGTaGACGGCTGCCTATGGGCGCCGCTTCCTTCCTGTC +
Preference number: 3 (lower is better)
Translates to: WPTGFPSGLCYV*TAAYGRRFLPV
Trigger: GACAGGAAGGAAGCGGCGCCCATAGGCAGCCGTGCACACATAGCAGAGTCCACTAGGAAAGCCAGTCGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 72 bp CCCAAGTTCCGTCCTGAGGACAGAGGCTATGCAGGCTaGCCTCTGAACCAACCTCAGCTCCCCTGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: PKFRPEDRGYAG*PLNQPQLPCPL
Trigger: CAGAGGACAGGGGAGCTGAGGTTGGTTCAGAGGCCAGCCTGCATAGCCTCTGTCCTCAGGACGGAACTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CAA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGCACACTTATCTTCATTaGGCCACTGAACCTTCCCAT +
Preference number: 3 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGHTYLH*ATEPSH
Trigger: ATGGGAAGGTTCAGTGGCCAAATGAAGATAAGTGTG...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 72 bp GGTTTGAAAAGCAGACGCACCGTACTCAATTCTGCCTaGGCCTGCTCCGTTCCCCTCACCCACAGGCCACCG +
Preference number: 3 (lower is better)
Translates to: GLKSRRTVLNSA*ACSVPLTHRPP
Trigger: CGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTGCGTCTGCTTTTCAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 72 bp GAATTCACAGTGTTCGGTGGTGGTAGGTGCGAGAGCTaGAAGTGTACAGCGTCTACGCTGCCGCCCGCCCAA +
Preference number: 3 (lower is better)
Translates to: EFTVFGGGRCES*KCTASTLPPAQ
Trigger: TTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTACCACCACCGAACACTGTGAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 72 bp AAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTaGGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGG +
Preference number: 3 (lower is better)
Translates to: KDSAPPSQLLSC*DGTASPFGGVR
Trigger: CCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 72 bp GGCTGTGAGCAGAGTGCTGGGGACTCTGGCACTGGGTaGTCACAGTGGTTGGTTGGTTCAGGAGAGGTGAGA +
Preference number: 3 (lower is better)
Translates to: GCEQSAGDSGTG*SQWLVGSGEVR
Trigger: TCTCACCTCTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCTGCTCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CAA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACATGGACCGGAAACCTTaGAGTTGCTCAGGTGCCTCT +
Preference number: 3 (lower is better)
Translates to: RASRELPLVSDAGGPRRDMDRKP*SCSGAS
Trigger: AGAGGCACCTGAGCAACTCAAAGGTTTCCGGTCCAT...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CAA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGAGAGCTATCAGTGCCGTaGGGATCCTGCTGGAGACTG +
Preference number: 3 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRELSVP*GSCWRL
Trigger: CAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTC...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 72 bp GGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTaGTTTGCCCACACTGGAGAATGGGGTGCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: GRRFLPVSCHPN*FAHTGEWGASS
Trigger: TGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 72 bp GTTGGGTTTGAAAAGCAGACGCACCGTACTCAATTCTaGCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCC +
Preference number: 3 (lower is better)
Translates to: VGFEKQTHRTQF*LSLLRSPHPQA
Trigger: GGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTGCGTCTGCTTTTCAAACCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 72 bp TTCAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTaGTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTC +
Preference number: 3 (lower is better)
Translates to: FKDSAPPSQLLS*CDGTASPFGGV
Trigger: GACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CCA 72 bp TGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTaGAGAGTGTCAGAAAGCTCCCAGAGGACAATGGAG +
Preference number: 3 (lower is better)
Translates to: CWTALSICDPPP*RVSESSQRTME
Trigger: CTCCATTGTCCTCTGGGAGCTTTCTGACACTCTCCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CAA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGCAGCAGCTGATATGGTaGGGTTTGAAAAGCAGACGC +
Preference number: 3 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLQQLIW*GLKSRR
Trigger: GCGTCTGCTTTTCAAACCCAACCATATCAGCTGCTG...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 72 bp CTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGAGGTaGGAACAGTCAGCTAGCTCTTGGCAACGGTGCCCA +
Preference number: 3 (lower is better)
Translates to: LGGHSGWLVQER*EQSASSWQRCP
Trigger: TGGGCACCGTTGCCAAGAGCTAGCTGACTGTTCTCACCTCTCCTGAACCAACCAACCACTGTGACCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR TCA 72 bp GTACGCAGGACCCACCCAGTTTATCGACTTGGGTTTTaGCTGCCCTGGCCGACTGGCTTTCCTAGTGGACTC +
Preference number: 3 (lower is better)
Translates to: VRRTHPVYRLGF*LPWPTGFPSGL
Trigger: GAGTCCACTAGGAAAGCCAGTCGGCCAGGGCAGTCAAAACCCAAGTCGATAAACTGGGTGGGTCCTGCGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 72 bp TTGACCTATGCCAGGAAAGCTCGGAGCCTGCTAAAGTaGCCACAGGAGGAACTGGGCACACAGCTGAGCCAA +
Preference number: 3 (lower is better)
Translates to: LTYARKARSLLK*PQEELGTQLSQ
Trigger: TTGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCTTTCCTGGCATAGGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 72 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTaGCCCTGGTGTGACCTGCACTTGGAGAAGTGCAAA +
Preference number: 3 (lower is better)
Translates to: GSFTVQKRSDRV*PWCDLHLEKCK
Trigger: TTTGCACTTCTCCAAGTGCAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 72 bp GCAGGACCCACCCAGTTTATCGACTTGGGTTTTGACTaGCCTGGCCGACTGGCTTTCCTAGTGGACTCTGCT +
Preference number: 3 (lower is better)
Translates to: AGPTQFIDLGFD*PGRLAFLVDSA
Trigger: AGCAGAGTCCACTAGGAAAGCCAGTCGGCCAGGGCAGTCAAAACCCAAGTCGATAAACTGGGTGGGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 72 bp GACTGGTTTTCTAATGTCTCTGACTGCAGCTCTGCCTaGTCCCTGCTCAAACCCGAGCATCTCGGGAACTCC +
Preference number: 3 (lower is better)
Translates to: DWFSNVSDCSSA*SLLKPEHLGNS
Trigger: GGAGTTCCCGAGATGCTCGGGTTTGAGCAGGGAGCAGGCAGAGCTGCAGTCAGAGACATTAGAAAACCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 72 bp ACCTTATTTAGCCTTTTCCACACCGGGGGCCAGGGATaGGCCCAGCAGCCAAGTGTAACCGTCAAACCGATA +
Preference number: 3 (lower is better)
Translates to: TLFSLFHTGGQG*AQQPSVTVKPI
Trigger: TATCGGTTTGACGGTTACACTTGGCTGCTGGGCCCATCCCTGGCCCCCGGTGTGGAAAAGGCTAAATAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 72 bp CCTATGCCCCCACGTCTATGTTTCCGCAGCACAGTGTaGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACA +
Preference number: 3 (lower is better)
Translates to: PMPPRLCFRSTV*FLSGSAWQKQT
Trigger: TGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGGGCATAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR GCA 72 bp CAGCATGTGCGCAGTGGCAGCGCAGTCTACTCTGGATaGTTTAGGGTTCCTGGTCAACTCTTGGAAGAAAGC +
Preference number: 3 (lower is better)
Translates to: QHVRSGSAVYSG*FRVPGQLLEES
Trigger: GCTTTCTTCCAAGAGTTGACCAGGAACCCTAAAGCATCCAGAGTAGACTGCGCTGCCACTGCGCACATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 72 bp TGTGTTCTGAACAAGTCACTTCTTGACCCTCTGGAATaGCAGTCCCATCTGCTAGCGGCCTGGAGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: CVLNKSLLDPLE*QSHLLAAWSAS
Trigger: AGAAGCACTCCAGGCCGCTAGCAGATGGGACTGGCATTCCAGAGGGTCAAGAAGTGACTTGTTCAGAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR GCA 72 bp AGCCTGGATTATTCATCCTGGGACCTGATTGACCTATaGCAGGAAAGCTCGGAGCCTGCTAAAGTGCCCACA +
Preference number: 3 (lower is better)
Translates to: SLDYSSWDLIDL*QESSEPAKVPT
Trigger: TGTGGGCACTTTAGCAGGCTCCGAGCTTTCCTGGCATAGGTCAATCAGGTCCCAGGATGAATAATCCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 72 bp TCTACTCTGGATGCTTTAGGGTTCCTGGTCAACTCTTaGAAGAAAGCCGGGGCCGAGAACTGTACAGCGGTA +
Preference number: 3 (lower is better)
Translates to: STLDALGFLVNS*KKAGAENCTAV
Trigger: TACCGCTGTACAGTTCTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAACCCTAAAGCATCCAGAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 72 bp TCCTGTCTCCTGCCATCCAAACTGATTTGCCCACACTaGAGAATGGGGTGCCTCTTCAAAGACTCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: SCLLPSKLICPH*RMGCLFKDSAP
Trigger: TGGAGCTGAGTCTTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAGACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR-3UTR CAA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAATCAAATTCACAGCCTTaGCTGGCTGGGAAAGAGGAG +
Preference number: 3 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSESNSQP*LAGKEE
Trigger: CTCCTCTTTCCCAGCCAGCAAAGGCTGTGAATTTGA...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CAA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGACAGCTGAGCCAACTTaGCCTCTCAAATCCACAGCA +
Preference number: 3 (lower is better)
Translates to: AFAGWERGVLLKPGLFILTAEPT*PLKSTA
Trigger: TGCTGTGGATTTGAGAGGCAAAGTTGGCTCAGCTGT...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 72 bp AGTGTTGCTGAAGCCTGGATTATTCATCCTGGGACCTaGTTGACCTATGCCAGGAAAGCTCGGAGCCTGCTA +
Preference number: 3 (lower is better)
Translates to: SVAEAWIIHPGT*LTYARKARSLL
Trigger: TAGCAGGCTCCGAGCTTTCCTGGCATAGGTCAATCAGGTCCCAGGATGAATAATCCAGGCTTCAGCAACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 72 bp TCACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTaGAGCCTGGATTATTCATCCTGGGACCTGATTGAC +
Preference number: 3 (lower is better)
Translates to: SQPLLAGKEECC*SLDYSSWDLID
Trigger: GTCAATCAGGTCCCAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 72 bp TCGGGAACCCCAGAAATGGACCGGAAACCTTTGAGTTaGTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAA +
Preference number: 3 (lower is better)
Translates to: SGTPEMDRKPLS*SGASKAVFLRE
Trigger: TTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTTCCGGTCCATTTCTGGGGTTCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 72 bp AGACACAGCCCCACTTCTGATTTCTGGCCAACCACATaGGTTAAGAATGTGCCTAACAGTACTCCCTGCACA +
Preference number: 3 (lower is better)
Translates to: RHSPTSDFWPTT*VKNVPNSTPCT
Trigger: TGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTGGCCAGAAATCAGAAGTGGGGCTGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 72 bp CTGTTAAAAACAATGTGTTCTGAACAAGTCACTTCTTaGCCCTCTGGAATGCCAGTCCCATCTGCTAGCGGC +
Preference number: 3 (lower is better)
Translates to: LLKTMCSEQVTS*PSGMPVPSASG
Trigger: GCCGCTAGCAGATGGGACTGGCATTCCAGAGGGTCAAGAAGTGACTTGTTCAGAACACATTGTTTTTAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
3UTR GCA 72 bp CATACATACCAACAAAGAATTCAAATTCACAGCCTTTaGTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: HTYQQRIQIHSL*WLGKRSVAEAW
Trigger: CCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGTGAATTTGAATTCTTTGTTGGTATGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 72 bp AACATTTTCATTACAGTTCAGTCCATTGCCACACCATaGGCAACAATACTTCTGAGCTGCTTTCTGCTGGCC +
Preference number: 3 (lower is better)
Translates to: NIFITVQSIATP*ATILLSCFLLA
Trigger: GGCCAGCAGAAAGCAGCTCAGAAGTATTGTTGCTCATGGTGTGGCAATGGACTGAACTGTAATGAAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 72 bp CTTCTGATTTCTGGCCAACCACATGGGTTAAGAATGTaGCTAACAGTACTCCCTGCACATACATACCAACAA +
Preference number: 3 (lower is better)
Translates to: LLISGQPHGLRM*LTVLPAHTYQQ
Trigger: TTGTTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTGGCCAGAAATCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR-3UTR CAA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACTTACAGTTCAGTCCATaGCCACACCATGAGCAACAA +
Preference number: 3 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYLQFSP*PHHEQQ
Trigger: TTGTTGCTCATGGTGTGGCAATGGACTGAACTGTAA...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR TCA 72 bp GATATAGCAGCTTCAAGCAGAAGAAACACCTATGGATaGTCTAAGCACAAAAGACAGCTTGAGGAGTGCATC +
Preference number: 3 (lower is better)
Translates to: DIAASSRRNTYG*SKHKRQLEECI
Trigger: GATGCACTCCTCAAGCTGTCTTTTGTGCTTAGATCATCCATAGGTGTTTCTTCTGCTTGAAGCTGCTATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CCA 72 bp ACCAAAGCTGGAAGCCCAGAAATATTTACACTCTCTTaGGTACTGAGGTCAGTCTATGTTGTTGCACAGATT +
Preference number: 3 (lower is better)
Translates to: TKAGSPEIFTLS*VLRSVYVVAQI
Trigger: AATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGAGAGTGTAAATATTTCTGGGCTTCCAGCTTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 72 bp TACACTCTCTTGGGTACTGAGGTCAGTCTATGTTGTTaGACAGATTGGTTATGTTTGGTACCTCAAAGTGTT +
Preference number: 3 (lower is better)
Translates to: YTLLGTEVSLCC*TDWLCLVPQSV
Trigger: AACACTTTGAGGTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGAGAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR GCA 72 bp ACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTaGACATACATACCAACAAAGAATTCAAATTCACAG +
Preference number: 3 (lower is better)
Translates to: TTWVKNVPNSTP*TYIPTKNSNSQ
Trigger: CTGTGAATTTGAATTCTTTGTTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGAGAGGCGCACCGGGATaGCAGCCTGCCCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGRGAPG*QPAPKA
Trigger: GGCCTTTGGGGCAGGCTGGCATCCCGGTGCGCCTCT...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTCTCCGCTCGGGAGGGTaGCGCAGGGTCATGGAGACT +
Preference number: 4 (lower is better)
Translates to: RRQYGAGQPRAVLRSLTGLRSGG*RRVMET
Trigger: AGTCTCCATGACCCTGCGGCACCCTCCCGAGCGGAG...ACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGCGCAGCGACAGGGTCTaGCCCTGGTGTGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGRSDRV*PWCDLH
Trigger: GTGCAGGTCACACCAGGGGCAGACCCTGTCGCTGCG...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGACCGGGGGCCAGGGATaGGCCCAGCAGCCAAGTGTA +
Preference number: 4 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGTGGQG*AQQPSV
Trigger: TACACTTGGCTGCTGGGCCCATCCCTGGCCCCCGGT...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GGTAGGTGCGAGAGCTGCAAGTGTACAGCGTCTACGCTGCCGCCCGCCCAAGAGGCCGCCCCCAAAGCCTaGGGAGAGCCGCTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GRCESCKCTASTLPPAQEAAPKA*GEPLPG
Trigger: TCCGGGAAGCGGCTCTCCTCAGGCTTTGGGGGCGGC...CTCTTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GTGTGCAGGGCACAGGCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCGGGACCTGCCCGTCCTaGCCCTCCGCAGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VCRAQAASSLVLRKAFLLGTCPS*PSAESW
Trigger: CCAGGACTCTGCGGAGGGGCAGGACGGGCAGGTCCC...GAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACACCGGGATGCCAGCCTaGCCCAAAGGCCACGCGGGG +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDTGMPA*PKGHAG
Trigger: CCCCGCGTGGCCTTTGGGGCAGGCTGGCATCCCGGT...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACTGGAGAGGGGGTGGCTaGAAGAGCCGAGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDWRGGG*KSRGRR
Trigger: GCGGCGGCCTCGGCTCTTCCAGCCACCCCCTCTCCA...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGCCGTCTGGATGGCTCTaGCCAGCGGTACAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGPSGWL*PAVQSS
Trigger: GCTGCTCTGTACCGCTGGCCAGAGCCATCCAGACGG...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCAGGGAGCGTGCCGCCTaGAGCAGCTTCCGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPRERAA*SSFRRC
Trigger: GCACCGGCGGAAGCTGCTCCAGGCGGCACGCTCCCT...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCAGGCGCCCGTCGCCCTaGACTTCTGGGCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPRRPSP*TSGPAG
Trigger: CCCTGCAGGCCCAGAAGTCCAGGGCGACGGGCGCCT...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGGCTCCTCCTGGATCCTaGAGCGCTCCGCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRAPPGS*SAPLGR
Trigger: CCTCCCGAGCGGAGCGCTTCAGGATCCAGGAGGAGC...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR TCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTGCTCCTCCTGGATCCTaGAGCGCTCCGCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRAPPGS*SAPLGR
Trigger: CCTCCCGAGCGGAGCGCTTCAGGATCCAGGAGGAGC...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAGATCCTGCTGGAGACTaGCCTGCCCGTCGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPDPAGD*PARRGS
Trigger: TGAACCCCGACGGGCAGGGCAGTCTCCAGCAGGATC...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCTCCGCAGAGTCCTaGCTCCGGCTGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRPSAES*LRLLLL
Trigger: GAGCAGCAGCAGCCGGAGCCAGGACTCTGCGGAGGG...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCATGGCAGGCGCCCTGCTaGGGGGACCCGTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAWQAPC*GDPSGW
Trigger: CCATCCAGACGGGTCCCCCCAGCAGGGCGCCTGCCA...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGTGGCAGGCGCCCTGCTaGGGGGACCCGTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLWQAPC*GDPSGW
Trigger: CCATCCAGACGGGTCCCCCCAGCAGGGCGCCTGCCA...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp GTGTGCAGGGCACAGGCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCTGCATGCTGGCCTTGTaGCAGGCGCCCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VCRAQAASSLVLRKAFLLCMLAL*QAPCWG
Trigger: CCCCCAGCAGGGCGCCTGCCACAAGGCCAGCATGCA...GAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCACCCACTCTCTTGCTCTaGTCCAGGGCACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPPTLLL*SRALGW
Trigger: CCAGCCCAGTGCCCTGGACCAGAGCAAGAGAGTGGG...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCAGGGAGCGTGCCGCCTaGAGCAGCTTCCGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATRERAA*SSFRRC
Trigger: GCACCGGCGGAAGCTGCTCCAGGCGGCACGCTCCCT...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGCCCTCTGCAGGACGTGGTGGTaGCAGGCCCAGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: PSGAVSTDPRAWRISWALCRTWW*QAQAKW
Trigger: CCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCA...GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCAGCCGCCCCCAAAGCCTaGGGAGAGCCGCTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPAAPKA*GEPLPG
Trigger: TCCGGGAAGCGGCTCTCCTCAGGCTTTGGGGGCGGC...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGGCCCTCTCCACATGCTaGGCAGACTGGAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRALSTC*ADWRGG
Trigger: ACCCCCTCTCCAGTCTGCTCAGCATGTGGAGAGGGC...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAGGAGTCTTGGTCAGATaGTCGCCCGCTGGCCATGCT +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPGVLVR*SPAGHA
Trigger: AGCATGGCCAGCGGGCGATCATCTGACCAAGACTCC...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR TCA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTGGTGCTGTGGGTCGCTaGTGCCGATGTCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAGAVGR*CRCPAG
Trigger: ACCTGCGGGACATCGGCATCAGCGACCCACAGCACC...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCATCGCCCGTACAGTGCTaGCAGGTCCAAAGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPSPVQC*QVQRGL
Trigger: GAGACCCCTTTGGACCTGGCAGCACTGTACGGGCGA...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAATCGCCCGCTGGCCATaGTGTCCAACGAATGGCAGG +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPIARWP*CPTNGR
Trigger: CCTGCCATTCGTTGGACAGCATGGCCAGCGGGCGAT...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCAGTCCTGGCTCCGGCTaGTGCTGCTCCGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPSPGSG*CCSACG
Trigger: ACCACAGGCGGAGCAGCAGCAGCCGGAGCCAGGACT...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACACAGTGGGGTGGGGCTaGAGGCCGGCTGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDTVGWG*RPAVSR
Trigger: TCTGCTCACAGCCGGCCTGCAGCCCCACCCCACTGT...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAAAGGTGCGCCGTGTGTaGAGGGCACAGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAKVRRV*RAQAAS
Trigger: GGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCATCCCAGCTTCTGAGCTaGTGCGATGGGACGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPSQLLS*CDGTAS
Trigger: AGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGA...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCTGCATGCTGGCCTTGTaGCAGGCGCCCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFCMLAL*QAPCWG
Trigger: CCCCCAGCAGGGCGCCTGCCACAAGGCCAGCATGCA...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCTCTGGTCCAGGGCACTaGGCTGGGAGGCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPSGPGH*AGRLQE
Trigger: CTCCTGGAGCCTCCCAGCCCAGTGCCCTGGACCAGA...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACAGGCGATGGCGGTGGTaGCAGTGGGAGCCTATGCCC +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDRRWRW*QWEPMP
Trigger: GGGCATAGGCTCCCACTGCCACCACCGCCATCGCCT...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAAGGCCCACTTGGATGTaGCCTGGCCCCTTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPRPTWM*PGPLGG
Trigger: TCCTCCTAAGGGGCCAGGCCACATCCAAGTGGGCCT...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GTGTGCAGGGCACAGGCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCACCCAGAGCCCCAAGTaGGGCAGTCAGCACGGACCC +
Preference number: 4 (lower is better)
Translates to: VCRAQAASSLVLRKAFLLTQSPK*GSQHGP
Trigger: GGGTCCGTGCTGACTGCCCCACTTGGGGCTCTGGGT...GAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCGCCGTGGAGGAGGCCTaGGAACTGCTCTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFAVEEA*ELLWDL
Trigger: CAGGTCCCAGAGCAGTTCTCAGGCCTCCTCCACGGC...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGTGCTGTGGGTCGCTaGTGCCGATGTCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAGAVGR*CRCPAG
Trigger: ACCTGCGGGACATCGGCATCAGCGACCCACAGCACC...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR TCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCATCTCTTCCGACCCACTaGGCTGCACCCAAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPSLPTH*AAPKFR
Trigger: ACGGAACTTGGGTGCAGCTCAGTGGGTCGGAAGAGA...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAACCCCTGAGCCCTCTTaGTGCCCACCTCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPTPEPS*CPPQRQ
Trigger: TTGCCTTTGAGGTGGGCATCAAGAGGGCTCAGGGGT...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCCACCATCCCAGCTTCTaGGCTGCTGCGATGGGACGG +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPHHPSF*AAAMGR
Trigger: CCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTG...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAGTGGCCATACTGCGCTaGACAATGCAGGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPVAILR*TMQGCL
Trigger: GAGACAGCCCTGCATTGTGCAGCGCAGTATGGCCAC...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp GGTAGGTGCGAGAGCTGCAAGTGTACAGCGTCTACGCTGCCGCCCGCCCAAGAGGGCTCCGGCTGCTGCTaGTCCGCCTGTGGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: GRCESCKCTASTLPPAQEGSGCC*SACGLL
Trigger: CAAAAGACCACAGGCGGAGCAGCAGCAGCCGGAGCC...CTCTTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCACCTGGCTCCGGCTGCTaGTGCTCCGCCTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAPGSGC*CSACGL
Trigger: AAGACCACAGGCGGAGCAGCAGCAGCCGGAGCCAGG...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGAGGCTCCAGGAGCATaGACACCCGTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDEAPGA*TPVSSS
Trigger: GCTGGAGGAGACGGGTGTGCATGCTCCTGGAGCCTC...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACAGCAGCTTCCGCCGGTaGTGTGGGTCGCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: RASRELPLVSDAGGPRRDSSFRR*CGSLMP
Trigger: CGGCATCAGCGACCCACAGCACCGGCGGAAGCTGCT...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCACTCCGCTCGGGAGGGTaGCGCAGGGTCATGGAGACT +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVALRSGG*RRVMET
Trigger: AGTCTCCATGACCCTGCGGCACCCTCCCGAGCGGAG...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp GTGTGCAGGGCACAGGCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCAGGCAGGGCTCGTTCTaGAGGACGTGGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VCRAQAASSLVLRKAFLLRQGSF*RTWWWQ
Trigger: CTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT...GAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGCACCGTACTCAATTCTaGCTGAGCCTGCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGHRTQF*LSLLRS
Trigger: GGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGGTCGGGAAGGTCTTATaGGCTGAGCAGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRVGKVL*AEQLVG
Trigger: GCCCACCAGCTGCTCAGCGCATAAGACCTTCCCGAC...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGCGGTACAGAGCAGCTaGAAAGGGTCCTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDAVQSS*KGSCPT
Trigger: GGTGGGGCAGGACCCTTTCCAGCTGCTCTGTACCGC...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp AGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTGGCCGTCTGGATGGCTCTaGCCAGCGGTACAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RWSGACWTALSICDPPPWPSGWL*PAVQSS
Trigger: GCTGCTCTGTACCGCTGGCCAGAGCCATCCAGACGG...CCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACCTTCCGCCGGTGCTGTaGGTCGCTGATGCCGATGTC +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDLPPVL*VADADV
Trigger: GACATCGGCATCAGCGACCCACAGCACCGGCGGAAG...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACCCAGAGCCTTCACCTTaGGTAGGGAGCGTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDPEPSP*VGSVPP
Trigger: AGGCGGCACGCTCCCTACCCAAGGTGAAGGCTCTGG...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCGCCGCAGGGTCAGCTTaGCCTCACGGTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFAAGSA*PHGAPP
Trigger: AGGAGGAGCACCGTGAGGCCAAGCTGACCCTGCGGC...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACTTGCCAACTCTGCACTaGGGCGTAGGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDLPTLH*GVGGCQ
Trigger: CTGGCAGCCCCCTACGCCCCAGTGCAGAGTTGGCAA...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp CGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTCACAGGCGTCTTGCGTaGATTCTGTCCCTCGCAGAT +
Preference number: 4 (lower is better)
Translates to: RRQYGAGQPRAVLRSLTGHRRLA*ILSLAD
Trigger: ATCTGCGAGGGACAGAATCCACGCAAGACGCCTGTG...ACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GGTAGGTGCGAGAGCTGCAAGTGTACAGCGTCTACGCTGCCGCCCGCCCAAGAGCAGGCCCAGGCCAAGTaGCCAAGAGGAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRCESCKCTASTLPPAQEQAQAK*PRGGPA
Trigger: TGCAGGACCTCCTCTTGGCCACTTGGCCTGGGCCTG...CTCTTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCATGCAGGACGTGGTGGTaGCAGGCCCAGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVACRTWW*QAQAKW
Trigger: CCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCA...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACCACAGTGCCTGCCCGTaGAGGCTTCCAGGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDHSACP*RLPGCN
Trigger: GTTGCACCCTGGAAGCCTCCACGGGCAGGCACTGTG...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCCGTTGGGATCCTGCTaGAGACTGCCCTGCCCGTCG +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLPLGSC*RLPCPS
Trigger: CGACGGGCAGGGCAGTCTCCAGCAGGATCCCAACGG...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CAA 72 bp GTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTaGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTA +
Preference number: 4 (lower is better)
Translates to: VRRVCRAQAASS*VLRKAFLLSEL
Trigger: TAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGCCCTCTCCACATGCTaGGCAGACTGGAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAALSTC*ADWRGG
Trigger: ACCCCCTCTCCAGTCTGCTCAGCATGTGGAGAGGGC...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR TCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGGGAGTCTTGGTCAGATaGTCGCCCGCTGGCCATGCT +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRGVLVR*SPAGHA
Trigger: AGCATGGCCAGCGGGCGATCATCTGACCAAGACTCC...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR TCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCGCCGTGGAGGAGGCCTaGGAACTGCTCTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: QRLSSTIPASELLRWDGLAVEEA*ELLWDL
Trigger: CAGGTCCCAGAGCAGTTCTCAGGCCTCCTCCACGGC...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCTGGTGGGCAGGCCTGTaGGGTAGCCCACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATWWAGL*GSPLSC
Trigger: GCAAGAGAGTGGGCTACCTCACAGGCCTGCCCACCA...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGTGGTGGGCAGGCCTGTaGGGTAGCCCACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLWWAGL*GSPLSC
Trigger: GCAAGAGAGTGGGCTACCTCACAGGCCTGCCCACCA...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR TCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAGGACCTTCAGGACATTaGCGAGCTCTAGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPGPSGH*RALAPR
Trigger: TCTGGGAGCTAGAGCTCGTCAATGTCCTGAAGGTCC...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR TCA 90 bp GCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTAGACTCCCTGCGAGGGAGGCGATaGTGCGCTTGCGATGGCCGA +
Preference number: 4 (lower is better)
Translates to: AASSLVLRKAFLLSELDSLRGRR*CACDGR
Trigger: TCGGCCATCGCAAGCGCATCATCGCCTCCCTCGCAG...GGAGTCTAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTGCAGGCGGAGGTaGGGCCTGGGTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QRLSSTIPASELLRWDGLSCRRR*GLGLQS
Trigger: GCTCTGAAGACCCAGGCCTCACCTCCGCCTGCAGGA...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCGGCGCTGTCTATCTGTaGTCCCCCACCGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPGAVYL*SPTVES
Trigger: ACTCTCCACGGTGGGGGATCACAGATAGACAGCGCC...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCCCTGGCTCCGGCTGCTaGTGCTCCGCCTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSAPGSGC*CSACGL
Trigger: AAGACCACAGGCGGAGCAGCAGCAGCCGGAGCCAGG...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCTTTCCTAGTGGACTCTGCTATGTGTGCACGGCTGCCTATGGGCGCCGCTTCCAACTGCTCTGGGACCTaGCCGTCCTGCCCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: AFLVDSAMCARLPMGAASNCSGT*PSCPSA
Trigger: TGCGGAGGGGCAGGACGGGCAGGTCCCAGAGCAGTT...GGAAGCGGCGCCCATAGGCAGCCGTGCACACATAGCAGAGTCCACTAGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCACTCCCCGACACTCTaGTCCAGCGTCCGTAAACCT +
Preference number: 4 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRHSPTL*SSVRKP
Trigger: AGGTTTACGGACGCTGGAGCAGAGTGTCGGGGAGTG...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGCCCTCCACTCCCCGACACTCTaGTCCAGCGTCCGTAAACCT +
Preference number: 4 (lower is better)
Translates to: PSGAVSTDPRAWRISWALHSPTL*SSVRKP
Trigger: AGGTTTACGGACGCTGGAGCAGAGTGTCGGGGAGTG...GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCAGCAGCTTCCGCCGGTaGTGTGGGTCGCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSASSFRR*CGSLMP
Trigger: CGGCATCAGCGACCCACAGCACCGGCGGAAGCTGCT...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGTGTCATGGCGCCTCCTaGCTGTGTCCCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SSTIPASELLRWDGLSFRCHGAS*LCPLEA
Trigger: TGCCTCCAGGGGACACAGGCAGGAGGCGCCATGACA...CCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCAGGCAGGGCTCGTTCTaGAGGACGTGGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFRQGSF*RTWWWQ
Trigger: CTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTAGGTGGTCAGGGGCATaGTGGACGGCGCTGTCTATC +
Preference number: 4 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRRWSGA*WTALSI
Trigger: GATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GGTAGGTGCGAGAGCTGCAAGTGTACAGCGTCTACGCTGCCGCCCGCCCAAGAGGGACTCTGCTATGTGTaGACGGCTGCCTATGGGCGC +
Preference number: 4 (lower is better)
Translates to: GRCESCKCTASTLPPAQEGLCYV*TAAYGR
Trigger: GCGCCCATAGGCAGCCGTGCACACATAGCAGAGTCC...CTCTTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGTGGCTTTGCTGGAGGTaGTGGACGTTCCCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRWLCWR*WTFPRP
Trigger: AGGCCTAGGGAACGTCCACCACCTCCAGCAAAGCCA...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGTCTGGTCCAGGGCACTaGGCTGGGAGGCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLSGPGH*AGRLQE
Trigger: CTCCTGGAGCCTCCCAGCCCAGTGCCCTGGACCAGA...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGCCAGAGCCTTCACCTTaGGTAGGGAGCGTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SSTIPASELLRWDGLSFRPEPSP*VGSVPP
Trigger: AGGCGGCACGCTCCCTACCCAAGGTGAAGGCTCTGG...CCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGATGATGCGCTTGCGATaGCCGAGCAGCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRMMRLR*PSSWTF
Trigger: GAAGGTCCAGCTGCTCGGCCATCGCAAGCGCATCAT...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTGGTCACGGTGCTCCTCCTaGATCCTGAAGCGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: RWSGACWTALSICDPPPWSRCSS*ILKRSA
Trigger: AGCGGAGCGCTTCAGGATCCAGGAGGAGCACCGTGA...CCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGGTGAGGCGATGGCGGTaGTGGCAGTGGGAGCCTATG +
Preference number: 4 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRVRRWR*WQWEPM
Trigger: CATAGGCTCCCACTGCCACCACCGCCATCGCCTCAC...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCACTTGGATGTGGCCTaGCCCCTTAGGAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRHLDVA*PLRRKT
Trigger: CGTCTTCCTCCTAAGGGGCCAGGCCACATCCAAGTG...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGTGCTTTCTGCTGGCCTaGGCATCTCAAAGACAGACC +
Preference number: 4 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGCFLLA*ASQRQT
Trigger: GGTCTGTCTTTGAGATGCCCAGGCCAGCAGAAAGCA...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGCCCTCCAGTCAGCTAGCTCTTaGCAACGGTGCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PSGAVSTDPRAWRISWALQSASS*QRCPAV
Trigger: CACAGCTGGGCACCGTTGCCAAGAGCTAGCTGACTG...GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGTGCCACCCACCTCCTTaGAGGGGAAGGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRCHPPP*RGRPIR
Trigger: CCTGATGGGCCTTCCCCTCCAAGGAGGTGGGTGGCA...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTAGGCCGCCTCCTCGTTaGTTCTACGGAAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRRPPPR*FYGRPS
Trigger: GGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCT...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGCCCCAGCGTCAGGATaGTCTCGTAGGTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDAPASG*SRRSGS
Trigger: TGAACCTGACCTACGAGATCATCCTGACGCTGGGGC...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR TCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGGTACTCAATTCTGCCTaGGCCTGCTCCGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRVLNSA*ACSVPL
Trigger: GAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTAC...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACCAGTGCTCCGATCACTaGCAGGTAAGAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDQCSDH*QVRGQG
Trigger: TCCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTG...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GGCTGCCTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTTGCGAGGAGTCAGGAGGCTaGGGGAGGTGGTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GCLWAPLPSCLLPSKLICEESGG*GRWSGA
Trigger: TGCCCCTGACCACCTCCCTCAGCCTCCTGACTCCTC...GCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCGGCTGCAGCCGAGCCTaGTCGGGCTCCCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSAGCSRA*SGSQTF
Trigger: GAAAGTTTGGGAGCCCGAGCAGGCTCGGCTGCAGCC...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGCAGTCGCCCGTACAGTaGTGCCAGGTCCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SSTIPASELLRWDGLSFRQSPVQ*CQVQRG
Trigger: ACCCCTTTGGACCTGGCAGCACTGTACGGGCGACTG...CCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCATCGCCCGCTGGCCATaGTGTCCAACGAATGGCAGG +
Preference number: 4 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATIARWP*CPTNGR
Trigger: CCTGCCATTCGTTGGACAGCATGGCCAGCGGGCGAT...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCATCGGGCGGTGGCTTTaGTGGAGGTGGTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFIGRWL*WRWWTF
Trigger: GAACGTCCACCACCTCCAGCAAAGCCACCGCCCGAT...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCGAGGCTCCAGGAGCATaGACACCCGTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSAEAPGA*TPVSSS
Trigger: GCTGGAGGAGACGGGTGTGCATGCTCCTGGAGCCTC...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGCTCGTACGGTCTGTCTaGGAGGGAGGCGATGATGCG +
Preference number: 4 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRLVRSV*EGGDDA
Trigger: CGCATCATCGCCTCCCTCGCAGACAGACCGTACGAG...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCCGGAGCCTGCTAAAGTaGCCACAGGAGGAACTGGGC +
Preference number: 4 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATRSLLK*PQEELG
Trigger: GCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCG...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGGCTCTGCCTGCTCCCTaGTCAAACCCGAGCATCTCG +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLALPAP*SNPSIS
Trigger: CGAGATGCTCGGGTTTGAGCAGGGAGCAGGCAGAGC...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACGACTGCAGCTCTGCCTaGTCCCTGCTCAAACCCGAG +
Preference number: 4 (lower is better)
Translates to: RASRELPLVSDAGGPRRDDCSSA*SLLKPE
Trigger: CTCGGGTTTGAGCAGGGAGCAGGCAGAGCTGCAGTC...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGGTACAGCGTCTACGCTaGCGCCCGCCCAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQEVQRLR*RPPKRS
Trigger: GCTCCTCTTGGGCGGGCGGCAGCGTAGACGCTGTAC...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTAGACTCCTGCTGGAGACTGCCCTaGCCGTCGGGGTTCACAGTG +
Preference number: 4 (lower is better)
Translates to: AASSLVLRKAFLLSELDSCWRLP*PSGFTV
Trigger: CACTGTGAACCCCGACGGGCAGGGCAGTCTCCAGCA...GGAGTCTAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACCTTTGCTGGAGGTGGTaGACGTTCCCTAGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDLCWRW*TFPRPH
Trigger: GTGAGGCCTAGGGAACGTCCACCACCTCCAGCAAAG...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCGATGGCCGAGCAGCTaGACCTTCAGGACATTGACG +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRRWPSS*TFRTLT
Trigger: CGTCAATGTCCTGAAGGTCCAGCTGCTCGGCCATCG...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTTGCCAACTCTGCACTaGGGCGTAGGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QRLSSTIPASELLRWDGLLPTLH*GVGGCQ
Trigger: CTGGCAGCCCCCTACGCCCCAGTGCAGAGTTGGCAA...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTGGGGCAGTTGGCGGTGGTGGCAGTaGGAGCCTATGCCCCCACGT +
Preference number: 4 (lower is better)
Translates to: LCEPACECSDTQSPKWGSWRWWQ*EPMPPR
Trigger: ACGTGGGGGCATAGGCTCCCACTGCCACCACCGCCA...ACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGTCGTTCTGCAGGACGTaGTGGTGGCAGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQESFCRT*WWQAQA
Trigger: GGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGA...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCTGGCGCTCTGGTGCTaGCTAAGACTTCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRLALWC*LRLPST
Trigger: AGTGCTGGGAAGTCTTAGCCAGCACCAGAGCGCCAG...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCAGAGGCCTGGCGCTCTaGTGCTGGCTAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFRGLAL*CWLRLP
Trigger: GGGAAGTCTTAGCCAGCACCAGAGCGCCAGGCCTCT...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGACAGGGTCTGCCCCTaGTGTGACCTGCACTTGGAG +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVADRVCP*CDLHLE
Trigger: CTCCAAGTGCAGGTCACACCAGGGGCAGACCCTGTC...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGCAGGGGAGAAGAGGTaGACAAGAAGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDAGEKR*TRSLWL
Trigger: CAGCCACAGGCTTCTTGTCCACCTCTTCTCCCCTGC...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCTGGGGACTCTGGCACTaGGTGGTCACAGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPWGLWH*VVTVVG
Trigger: ACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCA...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTGCTCCCAGAGGACAATaGAGGCCACTTGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRAPRGQ*RPLGPG
Trigger: ACCTGGACCAAGTGGCCTCCATTGTCCTCTGGGAGC...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CAA 72 bp GGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTaGGGCCCTCACAGAAAGCAGTCTGTCCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GSQHGPKGLAHI*GPHRKQSVPGP
Trigger: TGGACCAGGGACAGACTGCTTTCTGTGAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp AGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTGGAAGGCCCTTGATGGATaGGCAACCGCACTATCTGGG +
Preference number: 4 (lower is better)
Translates to: RWSGACWTALSICDPPPWKALDG*ATALSG
Trigger: CCCAGATAGTGCGGTTGCTCATCCATCAAGGGCCTT...CCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTGTGTGTGAAGGCCCTTaGTGGATGAGCAACCGCACT +
Preference number: 4 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAVCEGP*WMSNRT
Trigger: AGTGCGGTTGCTCATCCATCAAGGGCCTTCACACAC...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGTACTGAGCCCATCTaGAGTCTCCCACCCGAATGG +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAGTEPI*SLPPEW
Trigger: CCATTCGGGTGGGAGACTTCAGATGGGCTCAGTACC...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCGGCCTTCCTCCTCAGTaGGCTAGACTCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSAGLPPQ*ARLQSQ
Trigger: CTGGCTCTGGAGTCTAGCTCACTGAGGAGGAAGGCC...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCACAGTCGCCCGTACAGTaGTGCCAGGTCCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPQSPVQ*CQVQRG
Trigger: ACCCCTTTGGACCTGGCAGCACTGTACGGGCGACTG...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTCTTCTTCCCGGGCTaGACTCCCATGAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDVFFPG*TPMNPR
Trigger: CCTAGGATTCATGGGAGTGCAGCCCGGGAAGAAGAC...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGGTCTTCTTCCCGGGCTaGACTCCCATGAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRVFFPG*TPMNPR
Trigger: CCTAGGATTCATGGGAGTGCAGCCCGGGAAGAAGAC...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTAACTGCTCTGGGACCTaGCCGTCCTGCCCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: APKATRGSIDALSPYLAFNCSGT*PSCPSA
Trigger: TGCGGAGGGGCAGGACGGGCAGGTCCCAGAGCAGTT...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAAACTTGCTCTCATACTaGTGCAGCCCAATCGACTCC +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPNLLSY*CSPIDS
Trigger: GGAGTCGATTGGGCTGCAGCAGTATGAGAGCAAGTT...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp CGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTATGTTCCGGATCTCGTaGTCTGCAATGACGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RRQYGAGQPRAVLRSLTGMFRIS*SAMTFL
Trigger: CAAGAACGTCATTGCAGAGCACGAGATCCGGAACAT...ACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCGCCACTTCGAAGGCCTaGCCCAGCGTCAGGATGATC +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSAATSKA*PSVRMI
Trigger: GATCATCCTGACGCTGGGGCAGGCCTTCGAAGTGGC...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCGCTAGCGGCCTGGAGTaGTTCTCCACAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: QRLSSTIPASELLRWDGLASGLE*FSTAKA
Trigger: TGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTGGAGGCTTCCAGGGTaGAACAGAACCCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: QRLSSTIPASELLRWDGLWRLPG*NRTPEP
Trigger: GGGCTCAGGGGTTCTGTTGCACCCTGGAAGCCTCCA...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGAGCTCTTGGCAACGGTaGCCAGCTGTGGCTCAGTAC +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLSSWQR*PAVAQY
Trigger: GTACTGAGCCACAGCTGGGCACCGTTGCCAAGAGCT...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGGACTTGGGTTTTGACTaGCCTGGCCGACTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRDLGFD*PGRLAF
Trigger: GAAAGCCAGTCGGCCAGGGCAGTCAAAACCCAAGTC...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGAAGACTGGAGAGGGGGTaGCTGGAAGAGCCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRRLERG*LEEPRP
Trigger: CGGCCTCGGCTCTTCCAGCCACCCCCTCTCCAGTCT...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTTGTTGTTGCGCATGGTaGGGTCCGTCAGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSACCCAW*GPSAPL
Trigger: TAGAGGAGCTGACGGACCCCACCATGCGCAACAACA...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGTTGTTCGTGGAGTCTTaGTCAGATGATCGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRLFVES*SDDRPL
Trigger: CAGCGGGCGATCATCTGACCAAGACTCCACGAACAA...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCGGGCGGTGGCTTTGCTaGAGGTGGTGGACGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGGRWLC*RWWTFP
Trigger: AGGGAACGTCCACCACCTCCAGCAAAGCCACCGCCC...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCCCCACTCTCTTGCTCTaGTCCAGGGCACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGPTLLL*SRALGW
Trigger: CCAGCCCAGTGCCCTGGACCAGAGCAAGAGAGTGGG...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCATCATGGAGACTGTCATaGCGCCTCCTGCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVASWRLS*RLLPVS
Trigger: GGACACAGGCAGGAGGCGCCATGACAGTCTCCATGA...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCAGGAGACACTGGCATaGGATTGGGCATCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRQETLA*DWASWS
Trigger: GGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTG...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTGCTCCGCTTAGAGTCTaGTTTGGGGTCCACAACCCA +
Preference number: 4 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAAPLRV*FGVHNP
Trigger: TGGGTTGTGGACCCCAAACCAGACTCTAAGCGGAGC...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCCATCTGCTAGCGGCCTaGAGTGCTTCTCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFHLLAA*SASPQP
Trigger: TGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATG...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTGACTCTGGCACTGGGTaGTCACAGTGGTTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRDSGTG*SQWLVG
Trigger: ACCAACCAACCACTGTGACCACCCAGTGCCAGAGTC...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGAAAGGGTTAACCAATaGGGCCTGCGGACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAERVNQ*GLRTVE
Trigger: CTCCACCGTCCGCAGGCCCCATTGGTTAACCCTTTC...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTTTCCGCAGCACAGTGTaGTTCCTCAGTGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRFRSTV*FLSGSA
Trigger: AGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAA...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGGTGTGTGAAGGCCCTTaGTGGATGAGCAACCGCACT +
Preference number: 4 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRVCEGP*WMSNRT
Trigger: AGTGCGGTTGCTCATCCATCAAGGGCCTTCACACAC...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGCCCTCATTGACTCTGGTGTGTaGAGGCCCTTGATGGATGAG +
Preference number: 4 (lower is better)
Translates to: PSGAVSTDPRAWRISWALIDSGV*RPLMDE
Trigger: CTCATCCATCAAGGGCCTTCACACACCAGAGTCAAT...GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGTGCGGAGATGCTGTGTaGGTCAAAGTTTCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRCGDAV*VKVSGC
Trigger: GCACCCTGAAACTTTGACTCACACAGCATCTCCGCA...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR TCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGAACTGGGCACACAGCTaGGCCAACTTTGCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRNWAHS*ANFASQ
Trigger: TTGAGAGGCAAAGTTGGCTCAGCTGTGTGCCCAGTT...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGAAAGAGGAGTGTTGCTaGAGCCTGGATTATTCATCC +
Preference number: 4 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGKEECC*SLDYSS
Trigger: GGATGAATAATCCAGGCTTCAGCAACACTCCTCTTT...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp ACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGCCAGCCGGCTGGGACAGGTACTaGGCCCATCTGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TKRAAGKLKKQRRTGMPAGWDRY*AHLKSP
Trigger: GGGAGACTTCAGATGGGCTCAGTACCTGTCCCAGCC...GGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GGGGAGGAAAGGGTTAACCAATGGGGCCTGCGGACGGTGGAGGAAATGGAAAGGGTGCAACAGAACCCCTaGGCCCTCTTGATGCCCACC +
Preference number: 4 (lower is better)
Translates to: GEERVNQWGLRTVEEMERVQQNP*ALLMPT
Trigger: GGTGGGCATCAAGAGGGCTCAGGGGTTCTGTTGCAC...CCTTTCCATTTCCTCCACCGTCCGCAGGCCCCATTGGTTAACCCTTTCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGGTCCAGCCACATCACTaGGCTCAAGGTCTCACAAGG +
Preference number: 4 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRVQPHH*AQGLTR
Trigger: CCTTGTGAGACCTTGAGCTCAGTGATGTGGCTGGAC...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGAAGGCTGCCAGGCCTTaGGACTCCATGGCGAAGATA +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLKAARP*DSMAKI
Trigger: TATCTTCGCCATGGAGTCTCAAGGCCTGGCAGCCTT...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCAGCAGCTCTGTTCTGTaGGGGAAGAAGGTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSASSSVL*GKKVRR
Trigger: ACGGCGCACCTTCTTCCCTCACAGAACAGAGCTGCT...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCCTGCCTCTGGCTCAGTaGCTCTGCTCAGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGLPLAQ*LCSGRH
Trigger: GTGCCTTCCTGAGCAGAGTCACTGAGCCAGAGGCAG...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GTGTGCAGGGCACAGGCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCTACTGCGCTGCACAATaGAGGGCTGTCTCGTTGTCA +
Preference number: 4 (lower is better)
Translates to: VCRAQAASSLVLRKAFLLYCAAQ*RAVSLS
Trigger: TGACAACGAGACAGCCCTGCATTGTGCAGCGCAGTA...GAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCGGTAGTTGCTGTCCATaGCAGCATCGAGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFGSCCP*QHRGGP
Trigger: AGGTCCTCCTCGATGCTGGCATGGACAGCAACTACC...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTTCTCCGTCTGGTAGTTaGTGTCCATGCCAGCATCGA +
Preference number: 4 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRSPSGS*CPCQHR
Trigger: TCGATGCTGGCATGGACAGCAACTACCAGACGGAGA...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GGTAGGTGCGAGAGCTGCAAGTGTACAGCGTCTACGCTGCCGCCCGCCCAAGAGGTTGACGTCAGTTCCTaGAGCCAGCAGGATTTGCAC +
Preference number: 4 (lower is better)
Translates to: GRCESCKCTASTLPPAQEVDVSS*SQQDLH
Trigger: GTGCAAATCCTGCTGGCTGCAGGAACTGACGTCAAC...CTCTTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACAGCAGGTTTCACTCCTaGTGCCTCAGCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDSRFHS*CLSLLV
Trigger: AACAAGGAGGCTGAGGCAGCAGGAGTGAAACCTGCT...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp GGGGAGGAAAGGGTTAACCAATGGGGCCTGCGGACGGTGGAGGAAATGGAAAGGATCGGGCGGTGGCTTTaGTGGAGGTGGTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: GEERVNQWGLRTVEEMERIGRWL*WRWWTF
Trigger: GAACGTCCACCACCTCCAGCAAAGCCACCGCCCGAT...CCTTTCCATTTCCTCCACCGTCCGCAGGCCCCATTGGTTAACCCTTTCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACGTCAAAGTTTCAGGGTaGGAGCGGCTGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RASRELPLVSDAGGPRRDVKVSG*ERLLVV
Trigger: CACCACCAACAGCCGCTCGCACCCTGAAACTTTGAC...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GGTAGGTGCGAGAGCTGCAAGTGTACAGCGTCTACGCTGCCGCCCGCCCAAGAGTTGCTCTCATACTGCTaGAGCCCAATCGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRCESCKCTASTLPPAQELLSYC*SPIDSS
Trigger: GCTGGAGTCGATTGGGCTGCAGCAGTATGAGAGCAA...CTCTTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACCTGCCGACCGCCCAGTaGAGGAATCATTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: RASRELPLVSDAGGPRRDLPTAQ*RNHSDS
Trigger: TGAGTCAGAATGATTCCTGCACTGGGCGGTCGGCAG...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCATTCAATCATCTCAGCTaGAGAGGCGCCCGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPFNHLS*RGARRP
Trigger: AGGGCGACGGGCGCCTCTGCAGCTGAGATGATTGAA...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGATCAGGTGGTTCCAGTaGGGATTTCCTCACGCCGAC +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLIRWFQ*GFPHAD
Trigger: GTCGGCGTGAGGAAATCCGCACTGGAACCACCTGAT...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGGCGGGGGAGCATCGATaGACTGTCACCTTATTTAGC +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRAGEHR*TVTLFS
Trigger: GCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGC...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTGGGGCAGTGGCACCCTCCATGCCTaGTTTGAGCACCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: LCEPACECSDTQSPKWGSGTLHA*FEHPQP
Trigger: AGGCTGTGGGTGCTCAAAGCAGGCATGGAGGGTGCC...ACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp ATTTGGCCACTGAACCTTCCCATCGGGAACCCCAGAAATGGACCGGAAACCTTTTGGAGAGGGGGTGGCTaGAAGAGCCGAGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IWPLNLPIGNPRNGPETFWRGGG*KSRGRR
Trigger: GCGGCGGCCTCGGCTCTTCCAGCCACCCCCTCTCCA...AAAGGTTTCCGGTCCATTTCTGGGGTTCCCGATGGGAAGGTTCAGTGGCCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TTCCTGGTCAACTCTTGGAAGAAAGCCGGGGCCGAGAACTGTACAGCGGTAGCTAGACTGGAGAGGGGGTaGCTGGAAGAGCCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: FLVNSWKKAGAENCTAVARLERG*LEEPRP
Trigger: CGGCCTCGGCTCTTCCAGCCACCCCCTCTCCAGTCT...AGCTACCGCTGTACAGTTCTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTAGCAACCGCACTATCTaGGCATCTCCTTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRSNRTI*ASPFQA
Trigger: AGCCTGGAAAGGAGATGCCCAGATAGTGCGGTTGCT...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTATGCTGTCCAACGAATaGCAGGAGATGGCATTATAC +
Preference number: 4 (lower is better)
Translates to: RRQYGAGQPRAVLRSLTGMLSNE*QEMALY
Trigger: GTATAATGCCATCTCCTGCCATTCGTTGGACAGCAT...ACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTGGTTGTTCGTGGAGTCTTaGTCAGATGATCGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: RWSGACWTALSICDPPPWLFVES*SDDRPL
Trigger: CAGCGGGCGATCATCTGACCAAGACTCCACGAACAA...CCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp AAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCACCCCTCCGCAGAGTCCTaGCTCCGGCTGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KGHAGEHRCTVTLFSLFHPSAES*LRLLLL
Trigger: GAGCAGCAGCAGCCGGAGCCAGGACTCTGCGGAGGG...GTGGAAAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCACGATGGCCGAGCAGCTaGACCTTCAGGACATTGACG +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPRWPSS*TFRTLT
Trigger: CGTCAATGTCCTGAAGGTCCAGCTGCTCGGCCATCG...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCATGATGCGCTTGCGATaGCCGAGCAGCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: QRLSSTIPASELLRWDGLMMRLR*PSSWTF
Trigger: GAAGGTCCAGCTGCTCGGCCATCGCAAGCGCATCAT...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTAGACTCCTCATGGAGACTGTCATaGCGCCTCCTGCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: AASSLVLRKAFLLSELDSSWRLS*RLLPVS
Trigger: GGACACAGGCAGGAGGCGCCATGACAGTCTCCATGA...GGAGTCTAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTGGGGCAGTAGGTCCTCCGGGTCCTaGGCCGCACAGGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: LCEPACECSDTQSPKWGSRSSGS*AAQEMF
Trigger: GAACATTTCCTGTGCGGCCCAGGACCCGGAGGACCT...ACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCCAACCCAGGAGACACTaGCATGGGATTGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPQPRRH*HGIGHL
Trigger: AAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTG...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTGTGAGGCGATGGCGGTaGTGGCAGTGGGAGCCTATG +
Preference number: 4 (lower is better)
Translates to: APKATRGSIDALSPYLAFVRRWR*WQWEPM
Trigger: CATAGGCTCCCACTGCCACCACCGCCATCGCCTCAC...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GCTTTCCTAGTGGACTCTGCTATGTGTGCACGGCTGCCTATGGGCGCCGCTTCCCATCTGCTAGCGGCCTaGAGTGCTTCTCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: AFLVDSAMCARLPMGAASHLLAA*SASPQP
Trigger: TGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATG...GGAAGCGGCGCCCATAGGCAGCCGTGCACACATAGCAGAGTCCACTAGGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACCACTTCTTGACCCTCTaGAATGCCAGTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDHFLTL*NASPIC
Trigger: GCAGATGGGACTGGCATTCCAGAGGGTCAAGAAGTG...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCAGAGGCTATGCAGGCTaGCCTCTGAACCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFRGYAG*PLNQPQ
Trigger: CTGAGGTTGGTTCAGAGGCCAGCCTGCATAGCCTCT...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGTACAGCGGTAGCTCATaGGCATCCTCACAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLYSGSS*ASSQAL
Trigger: CAGGGCCTGTGAGGATGCCCATGAGCTACCGCTGTA...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCATTCCTGGTCAACTCTTaGAAGAAAGCCGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAFLVNS*KKAGAE
Trigger: CTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAA...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp ACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGCCAGCCCCAGCATGTGCGCAGTaGCAGCGCAGTCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: TKRAAGKLKKQRRTGMPAPACAQ*QRSLLW
Trigger: CCAGAGTAGACTGCGCTGCCACTGCGCACATGCTGG...GGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGGTGCAGGTGGGGCCTTaGCATCAGCAGCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQEVQVGP*HQQLEG
Trigger: TCCTTCCAGCTGCTGATGCCAAGGCCCCACCTGCAC...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCACTGGGTGGTCACAGTaGTTGGTTGGTTCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPTGWSQ*LVGSGE
Trigger: CTCTCCTGAACCAACCAACCACTGTGACCACCCAGT...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGAACGGACCCAAGGGCCTaGCGCATATCTTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRTDPRA*RISWAL
Trigger: GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGT...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGAGTGCACGGCTGCCTATaGGCGCCGCTTCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRVHGCL*APLPSC
Trigger: ACAGGAAGGAAGCGGCGCCCATAGGCAGCCGTGCAC...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCAAGGGTAGCAGCCTTTTaGGTCAGCCACGTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPRVAAF*VSHVGQ
Trigger: CTGACCAACGTGGCTGACTCAAAAGGCTGCTACCCT...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGATTGACTCTGGTGTGTaGAGGCCCTTGATGGATGAG +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRIDSGV*RPLMDE
Trigger: CTCATCCATCAAGGGCCTTCACACACCAGAGTCAAT...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR TCA 90 bp GTGTGCAGGGCACAGGCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCTTCTCCACGTCACCCTaGGACTTCTGTGATATGGAG +
Preference number: 4 (lower is better)
Translates to: VCRAQAASSLVLRKAFLLFSTSP*DFCDME
Trigger: CTCCATATCACAGAAGTCTCAGGGTGACGTGGAGAA...GAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGGGAGCTGTAACCACTTaGCAAGAAGGAATGGACGTA +
Preference number: 4 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRGAVTT*QEGMDV
Trigger: TACGTCCATTCCTTCTTGTCAAGTGGTTACAGCTCC...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGCTGACTCAGTGGGGATaGCGTCTGGGAGAGCAAATC +
Preference number: 4 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLLTQWG*RLGEQI
Trigger: GATTTGCTCTCCCAGACGTCATCCCCACTGAGTCAG...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGGTGCAGGAATCATTCTaGCTCAGTGGGGATGACGTC +
Preference number: 4 (lower is better)
Translates to: SSTIPASELLRWDGLSFRVQESF*LSGDDV
Trigger: GACGTCATCCCCACTGAGTCAGAATGATTCCTGCAC...CCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAATCCTGCAGGCGGAGGTaGGGCCTGGGTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSESCRRR*GLGLQS
Trigger: GCTCTGAAGACCCAGGCCTCACCTCCGCCTGCAGGA...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTATGCAGGCTGGCCTCTaGACCAACCTCAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: APKATRGSIDALSPYLAFMQAGL*TNLSSP
Trigger: AGGGGAGCTGAGGTTGGTTCAGAGGCCAGCCTGCAT...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCTGGACCGGAAACCTTTaGGTTGCTCAGGTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATWTGNL*VAQVPL
Trigger: TAGAGGCACCTGAGCAACTCAAAGGTTTCCGGTCCA...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAACACAGCCCCACTTCTaGTTTCTGGCCAACCACATG +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVATQPHF*FLANHM
Trigger: CATGTGGTTGGCCAGAAATCAGAAGTGGGGCTGTGT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGTATCGACTTGGGTTTTaGCTGCCCTGGCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQEYRLGF*LPWPTG
Trigger: GCCAGTCGGCCAGGGCAGTCAAAACCCAAGTCGATA...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTAAGTGCAGAGGGGTGTaGTTCTTAGTGTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAKCRGV*FLVLQL
Trigger: GAGCTGCAACACTAAGAAGCACACCCCTCTGCACTT...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTAGACTCCGGTAGTTGCTGTCCATaGCAGCATCGAGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: AASSLVLRKAFLLSELDSGSCCP*QHRGGP
Trigger: AGGTCCTCCTCGATGCTGGCATGGACAGCAACTACC...GGAGTCTAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGGCACCACATCGGTCTTaGCAAACAAAGCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRAPHRS*QTKQPH
Trigger: ATGAGGCTGCTTTGTTTGGCAAGACCGATGTGGTGC...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTTCTCCTCCAGCTGCATaGTGGCCTTGTGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLSPPAA*WPCGRR
Trigger: GCGCCTGCCACAAGGCCAGCATGCAGCTGGAGGAGA...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAGCCTTTTCTTCCCAATaGTGCAGTTGGATAAGGACT +
Preference number: 4 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPAFSSQ*CSWIRT
Trigger: AGTCCTTATCCAACTGCAGCATTGGGAAGAAAAGGC...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTAACTTGCTCTCATACTaGTGCAGCCCAATCGACTCC +
Preference number: 4 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSANLLSY*CSPIDS
Trigger: GGAGTCGATTGGGCTGCAGCAGTATGAGAGCAAGTT...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GGCTGCCTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTTGCTTCAATCATCTCAGCTaGAGAGGCGCCCGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: GCLWAPLPSCLLPSKLICFNHLS*RGARRP
Trigger: AGGGCGACGGGCGCCTCTGCAGCTGAGATGATTGAA...GCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGCTTGACCCTCTGGAATaGCAGTCCCATCTGCTAGCG +
Preference number: 4 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLLDPLE*QSHLLA
Trigger: CGCTAGCAGATGGGACTGGCATTCCAGAGGGTCAAG...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCCTTGACCCTCTGGAATaGCAGTCCCATCTGCTAGCG +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSALDPLE*QSHLLA
Trigger: CGCTAGCAGATGGGACTGGCATTCCAGAGGGTCAAG...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCCCCAACCTGCTGGGTaGTTAGCAGATAGAAACCCA +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLPQPAG*LADRNP
Trigger: TGGGTTTCTATCTGCTAAGCACCCAGCAGGTTGGGG...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGAAGGACGGTGGGTGGTaGAGGTGTGACAGTAACAAC +
Preference number: 4 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRKDGGW*RCDSNN
Trigger: GTTGTTACTGTCACACCTGCACCACCCACCGTCCTT...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTGGGGCAGTCTGGGGAGCTATCAGTaGCGTTGGGATCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LCEPACECSDTQSPKWGSLGSYQ*RWDPAG
Trigger: TCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAG...ACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCATCCAAACTGATTTaGCCACACTGGAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRPSKLI*PHWRMG
Trigger: CCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGG...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAATTTGTTGTTGCGCATaGTGGGGTCCGTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAICCCA*WGPSAP
Trigger: AGGAGCTGACGGACCCCACCATGCGCAACAACAAAT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTGCATCGAGGAGGACCTaGACCACGGCTTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: APKATRGSIDALSPYLAFASRRT*TTALWP
Trigger: TGGCCACAAAGCCGTGGTCCAGGTCCTCCTCGATGC...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GGTAGGTGCGAGAGCTGCAAGTGTACAGCGTCTACGCTGCCGCCCGCCCAAGAGCAGCCTCCTTGTTCGTaGAGTCTTGGTCAGATGATC +
Preference number: 4 (lower is better)
Translates to: GRCESCKCTASTLPPAQEQPPCS*SLGQMI
Trigger: GATCATCTGACCAAGACTCCACGAACAAGGAGGCTG...CTCTTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GGCTGCCTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTTGCTGGCTTTGCTGGAGGTaGTGGACGTTCCCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: GCLWAPLPSCLLPSKLICWLCWR*WTFPRP
Trigger: AGGCCTAGGGAACGTCCACCACCTCCAGCAAAGCCA...GCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp AAGCTGTCCTCAGCCCAAGGGGGAGAATTCACAGTGTTCGGTGGTGGTAGGTGCCTCTTCATCGGGCGGTaGCTTTGCTGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLSSAQGGEFTVFGGGRCLFIGR*LCWRWW
Trigger: CCACCACCTCCAGCAAAGCCACCGCCCGATGAAGAG...GCACCTACCACCACCGAACACTGTGAATTCTCCCCCTTGGGCTGAGGACAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAAGGGGACCCGTCTGGATaGCTCTGGCCAGCGGTACAG +
Preference number: 4 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSEGDPSG*LWPAVQ
Trigger: CTGTACCGCTGGCCAGAGCCATCCAGACGGGTCCCC...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCTCCCAATGCTGCAGTTaGATAAGGACTCACTCCGAC +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPSQCCS*IRTHSD
Trigger: GTCGGAGTGAGTCCTTATCCAACTGCAGCATTGGGA...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTCTTCCGCCGGTGCTGTaGGTCGCTGATGCCGATGTC +
Preference number: 4 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLLPPVL*VADADV
Trigger: GACATCGGCATCAGCGACCCACAGCACCGGCGGAAG...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GTGTGCAGGGCACAGGCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCTGGGAGAGCAAATCTTaGCACCTCAGCTGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: VCRAQAASSLVLRKAFLLWESKS*HLSWEN
Trigger: ATTCTCCCAGCTGAGGTGCCAAGATTTGCTCTCCCA...GAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAAGTGGGGATGACGTCTaGGAGAGCAAATCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVASGDDV*ESKSWH
Trigger: GTGCCAAGATTTGCTCTCCCAGACGTCATCCCCACT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACTGGGATTGGGCATCTTaGTCCATATCAGGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDWDWAS*SISGGS
Trigger: GGAACCACCTGATATGGACCAAGATGCCCAATCCCA...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACTTCCGCAGCACAGTGTaGTTCCTCAGTGGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: RASRELPLVSDAGGPRRDFRSTV*FLSGSV
Trigger: AACTGAGCCACTGAGGAACCACACTGTGCTGCGGAA...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGCACTTCTTGACCCTCTaGAATGCCAGTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRHFLTL*NASPIC
Trigger: GCAGATGGGACTGGCATTCCAGAGGGTCAAGAAGTG...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCAGAAACCCACAAGGCCTaGCCTCTAGCCAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPETHKA*PLASQR
Trigger: TCTCTGACTGGCTAGAGGCCAGGCCTTGTGGGTTTC...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAAGTCTCCCACCCGAATaGGCTCCTTCACAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVASLPPE*APSQFR
Trigger: TCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGTTGGTCCATATCAGGTaGTTCCAGCTTGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRLVHIR*FQLDSR
Trigger: CCTGGAGTCAAGCTGGAACCACCTGATATGGACCAA...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGAGAGTGCTGGGGACTCTaGCACTGGGTGGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRECWGL*HWVVTV
Trigger: CACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTC...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCTGTGATCCCCCACCGTaGAGAGTGTCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSACDPPP*RVSESS
Trigger: GGAGCTTTCTGACACTCTCCACGGTGGGGGATCACA...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GGCTGCCTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTTGCTGGTCAGGGGCATGCTaGACGGCGCTGTCTATCTGT +
Preference number: 4 (lower is better)
Translates to: GCLWAPLPSCLLPSKLICWSGAC*TALSIC
Trigger: ACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCA...GCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCTGATTTGCCCACACTaGAGAATGGGGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLLICPH*RMGCLF
Trigger: GAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAG...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGAGGAAGGCACAAGGATaGGTGGGTACGCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQERKAQG*VGTQDP
Trigger: TGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCT...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTGGGGCAGTGGGGCCTGCGGACGGTaGAGGAAATGGAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: LCEPACECSDTQSPKWGSGACGR*RKWKGN
Trigger: GTTTCCTTTCCATTTCCTCCACCGTCCGCAGGCCCC...ACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCACTCAGTGGCTCAGCTTaGCAGAAGCAAACAATGGGG +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVALSGSA*QKQTMG
Trigger: CCCCATTGTTTGCTTCTGCCAAGCTGAGCCACTGAG...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp TTGAGACTCCATGGCGAAGATAGAGGGGCTGTCCACACACATGCCACCCACCTCCGGGCTGCACTCCCATaGATCCTAGGTCTCATGGAC +
Preference number: 4 (lower is better)
Translates to: LRLHGEDRGAVHTHATHLRAALP*ILGLMD
Trigger: GTCCATGAGACCTAGGATTCATGGGAGTGCAGCCCG...GAGGTGGGTGGCATGTGTGTGGACAGCCCCTCTATCTTCGCCATGGAGTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GCTTTCCTAGTGGACTCTGCTATGTGTGCACGGCTGCCTATGGGCGCCGCTTCCTGCGGAGATGCTGTGTaGGTCAAAGTTTCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: AFLVDSAMCARLPMGAASCGDAV*VKVSGC
Trigger: GCACCCTGAAACTTTGACTCACACAGCATCTCCGCA...GGAAGCGGCGCCCATAGGCAGCCGTGCACACATAGCAGAGTCCACTAGGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp AAGCTGTCCTCAGCCCAAGGGGGAGAATTCACAGTGTTCGGTGGTGGTAGGTGCAGCGTCCTCTGTGGGTaGGCAGGTCAGGAGATCAGA +
Preference number: 4 (lower is better)
Translates to: KLSSAQGGEFTVFGGGRCSVLCG*AGQEIR
Trigger: TCTGATCTCCTGACCTGCTCACCCACAGAGGACGCT...GCACCTACCACCACCGAACACTGTGAATTCTCCCCCTTGGGCTGAGGACAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTGGGGCAGTCTGACTCAGTGGGGATaGCGTCTGGGAGAGCAAATC +
Preference number: 4 (lower is better)
Translates to: LCEPACECSDTQSPKWGSLTQWG*RLGEQI
Trigger: GATTTGCTCTCCCAGACGTCATCCCCACTGAGTCAG...ACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGTCTCGTGCTCTGCAATaGCGTTCTTGTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLSRALQ*RSCWRH
Trigger: ATGCCTCCAACAAGAACGTCATTGCAGAGCACGAGA...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR TCA 90 bp AAGCTGTCCTCAGCCCAAGGGGGAGAATTCACAGTGTTCGGTGGTGGTAGGTGCGCCCCAGCGTCAGGATaGTCTCGTAGGTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: KLSSAQGGEFTVFGGGRCAPASG*SRRSGS
Trigger: TGAACCTGACCTACGAGATCATCCTGACGCTGGGGC...GCACCTACCACCACCGAACACTGTGAATTCTCCCCCTTGGGCTGAGGACAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATCTTCAGAGCTGCAGGTaGGGCGATGGCGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNLQSCR*GDGGGG
Trigger: GCCACCACCGCCATCGCCTCACCTGCAGCTCTGAAG...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCGAACAAGTCACTTCTTaGCCCTCTGGAATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFEQVTS*PSGMPV
Trigger: GACTGGCATTCCAGAGGGTCAAGAAGTGACTTGTTC...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCATCTTCATTTGGCCACTaGACCTTCCCATCGGGAACC +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPSSFGH*TFPSGT
Trigger: GGTTCCCGATGGGAAGGTTCAGTGGCCAAATGAAGA...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCACTACCGCAGAGAGAGCTaGGTCCCAGGCCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: KGHAGEHRCTVTLFSLFHYRRES*VPGPNL
Trigger: CAGGTTGGGGCCTGGGACTCAGCTCTCTCTGCGGTA...GTGGAAAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCAGGGGCCTTCCCACTTaGAGCCTGTCCTTAAAGTTA +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFRGLPT*SLSLKL
Trigger: TAACTTTAAGGACAGGCTTCAAGTGGGAAGGCCCCT...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCACTCTCTTGGGTACTaGGGTCAGTCTATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAHSLGY*GQSMLL
Trigger: CAACAACATAGACTGACCTCAGTACCCAAGAGAGTG...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGTCCTGCCATCCAAACTaGTTTGCCCACACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSTIPASELLRWDGLSFRSCHPN*FAHTGE
Trigger: TTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGA...CCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCTTCCTTGCTGCCAAGTaGAGAGGGGTGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATFLAAK*RGVCFL
Trigger: TAAGAAGCACACCCCTCTGCACTTGGCAGCAAGGAA...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCAACAAAGCAGCCTCATaGAAAGCACTGCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATNKAAS*KALPIS
Trigger: GGAGATGGGCAGTGCTTTGCATGAGGCTGCTTTGTT...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGGCACCACATCGGTCTTaGCAAACAAAGCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSTIPASELLRWDGLSFRAPHRS*QTKQPH
Trigger: ATGAGGCTGCTTTGTTTGGCAAGACCGATGTGGTGC...CCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GGCTGCCTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTTGCGCAGCCAGCAGGATTTaGACCACATCGGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GCLWAPLPSCLLPSKLICAASRI*TTSVLP
Trigger: TGGCAAGACCGATGTGGTGCAAATCCTGCTGGCTGC...GCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCAGGTTTCACTCCTGCTaGCTCAGCCTCCTTGTTCGT +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSARFHSC*LSLLVR
Trigger: ACGAACAAGGAGGCTGAGGCAGCAGGAGTGAAACCT...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGAGGGACCTGCCCGTCCTaGCCCTCCGCAGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGGTCPS*PSAESW
Trigger: CCAGGACTCTGCGGAGGGGCAGGACGGGCAGGTCCC...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGACCAGGGTGCGGAGATaGTGTGTGAGTCAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLTRVRR*CVSQSF
Trigger: GAAACTTTGACTCACACAGCATCTCCGCACCCTGGT...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTCATTCAGAAGCAACTTaGTCTCATACTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRHSEAT*SHTAAA
Trigger: GGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATG...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAATGTCCCGCAGGTCCTaGTCTTCCATCACATTAGAC +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAMSRRS*SSITLD
Trigger: GTCTAATGTGATGGAAGAGCAGGACCTGCGGGACAT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTAGCTTGGCCTCACGGTaGTCCTCCTGGATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: APKATRGSIDALSPYLAFSLASR*SSWILK
Trigger: CTTCAGGATCCAGGAGGAGCACCGTGAGGCCAAGCT...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCCAGCTGAGCCAACTTTaGCTCTCAAATCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFQLSQL*LSNPQQ
Trigger: CTGCTGTGGATTTGAGAGGCAAAGTTGGCTCAGCTG...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGGGTAGGTGCGAGAGCTaGAAGTGTACAGCGTCTACG +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQEGRCES*KCTAST
Trigger: CGTAGACGCTGTACACTTGCAGCTCTCGCACCTACC...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTCAGCTTCTGAGCTGCTaGGATGGGACGGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLQLLSC*DGTASP
Trigger: AGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTTTCCTAGTGGACTCTaGTATGTGTGCACGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QRLSSTIPASELLRWDGLFPSGL*YVCTAA
Trigger: GGCAGCCGTGCACACATAGCAGAGTCCACTAGGAAA...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGTCGACCACATCCTTATaGCCATTCAAAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRSTTSL*PFKAAW
Trigger: CCATGCTGCTTTGAATGGCCATAAGGATGTGGTCGA...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCTTGAGTCAGCCACGTTaGTCAGCGCATCGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSALSQPR*SAHRSS
Trigger: TGAGGAACGATGCGCTGACCAACGTGGCTGACTCAA...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGCAGATGATCGCCCGCTaGCCATGCTGTCCAACGAAT +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQEQMIAR*PCCPTN
Trigger: ATTCGTTGGACAGCATGGCCAGCGGGCGATCATCTG...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAAGCGGTACAGAGCAGCTaGAAAGGGTCCTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSEAVQSS*KGSCPT
Trigger: GGTGGGGCAGGACCCTTTCCAGCTGCTCTGTACCGC...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATGGGGACCCGTCTGGATaGCTCTGGCCAGCGGTACAG +
Preference number: 4 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNGDPSG*LWPAVQ
Trigger: CTGTACCGCTGGCCAGAGCCATCCAGACGGGTCCCC...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCTTAGACCCCAGGAAGTaGACATCGTCAAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPLDPRK*TSSKPF
Trigger: GAATGGCTTTGACGATGTCCACTTCCTGGGGTCTAA...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAAGCCGCAGGGTCAGCTTaGCCTCACGGTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKAAGSA*PHGAPP
Trigger: AGGAGGAGCACCGTGAGGCCAAGCTGACCCTGCGGC...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGATGAGTTTCTCTGGCTaGTGTTGCCAACTCTGCACT +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRMSFSG*CCQLCT
Trigger: AGTGCAGAGTTGGCAACACCAGCCAGAGAAACTCAT...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCTGGGATTGGGCATCTTaGTCCATATCAGGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATWDWAS*SISGGS
Trigger: GGAACCACCTGATATGGACCAAGATGCCCAATCCCA...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTGGGGCAGTGCTCCGCTTAGAGTCTaGTTTGGGGTCCACAACCCA +
Preference number: 4 (lower is better)
Translates to: LCEPACECSDTQSPKWGSAPLRV*FGVHNP
Trigger: TGGGTTGTGGACCCCAAACCAGACTCTAAGCGGAGC...ACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATAGGCGATGGCGGTGGTaGCAGTGGGAGCCTATGCCC +
Preference number: 4 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNRRWRW*QWEPMP
Trigger: GGGCATAGGCTCCCACTGCCACCACCGCCATCGCCT...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAACTGCAGGTGAGGCGATaGCGGTGGTGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKLQVRR*RWWQWE
Trigger: CTCCCACTGCCACCACCGCCATCGCCTCACCTGCAG...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGTCGTTCTGCAGGACGTaGTGGTGGCAGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AFAGWERGVLLKPGLFILSFCRT*WWQAQA
Trigger: GGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGA...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CTGTGTGAGCCAGCCTGTGAGTGTTCAGATACCCAGAGCCCCAAGTGGGGCAGTAGGAAGGACGGTGGGTaGTGCAGGTGTGACAGTAAC +
Preference number: 4 (lower is better)
Translates to: LCEPACECSDTQSPKWGSRKDGG*CRCDSN
Trigger: GTTACTGTCACACCTGCACCACCCACCGTCCTTCCT...ACTGCCCCACTTGGGGCTCTGGGTATCTGAACACTCACAGGCTGGCTCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCCTTGGCATCAGCAGCTaGAAGGAGAGAGTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QRLSSTIPASELLRWDGLLGISS*KERVED
Trigger: GTCCTCAACTCTCTCCTTCCAGCTGCTGATGCCAAG...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp AAGCTGTCCTCAGCCCAAGGGGGAGAATTCACAGTGTTCGGTGGTGGTAGGTGCAACGGTGCCCAGCTGTaGCTCAGTACAGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: KLSSAQGGEFTVFGGGRCNGAQL*LSTADR
Trigger: CCTGTCTGCTGTACTGAGCCACAGCTGGGCACCGTT...GCACCTACCACCACCGAACACTGTGAATTCTCCCCCTTGGGCTGAGGACAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCGGTTATCTTTTATGTTaGCGTCAGTTCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPGYLLC*RQFLQP
Trigger: TGGCTGCAGGAACTGACGTCAACATAAAAGATAACC...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGTTCTCCACGTCACCCTaGGACTTCTGTGATATGGAG +
Preference number: 4 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLFSTSP*DFCDME
Trigger: CTCCATATCACAGAAGTCTCAGGGTGACGTGGAGAA...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp TTAAAAACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGCTGCGAGGGAGGCGATaGTGCGCTTGCGATGGCCGA +
Preference number: 4 (lower is better)
Translates to: LKTKRAAGKLKKQRRTGMLRGRR*CACDGR
Trigger: TCGGCCATCGCAAGCGCATCATCGCCTCCCTCGCAG...CATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGTTTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GCTTTCCTAGTGGACTCTGCTATGTGTGCACGGCTGCCTATGGGCGCCGCTTCCTCACATCCACGGTGCTaGACACATGGCAATAGTGGT +
Preference number: 4 (lower is better)
Translates to: AFLVDSAMCARLPMGAASSHPRC*THGNSG
Trigger: ACCACTATTGCCATGTGTTCAGCACCGTGGATGTGA...GGAAGCGGCGCCCATAGGCAGCCGTGCACACATAGCAGAGTCCACTAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTCATTGTTCTTGGCATTaGTATAAGGGTCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRHCSWH*YKGQRG
Trigger: GCCCCTTTGACCCTTATATCAATGCCAAGAACAATG...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCAAGTGCAGAGGGGTGTaGTTCTTAGTGTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QRLSSTIPASELLRWDGLKCRGV*FLVLQL
Trigger: GAGCTGCAACACTAAGAAGCACACCCCTCTGCACTT...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTTCCTTGCTGCCAAGTaGAGAGGGGTGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: QRLSSTIPASELLRWDGLFLAAK*RGVCFL
Trigger: TAAGAAGCACACCCCTCTGCACTTGGCAGCAAGGAA...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTGCAGCCAGCAGGATTTaGACCACATCGGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: APKATRGSIDALSPYLAFAASRI*TTSVLP
Trigger: TGGCAAGACCGATGTGGTGCAAATCCTGCTGGCTGC...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGGGCTCCGGCTGCTGCTaGTCCGCCTGTGGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: AFAGWERGVLLKPGLFILGSGCC*SACGLL
Trigger: CAAAAGACCACAGGCGGAGCAGCAGCAGCCGGAGCC...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATAGGAGGCCTGAGAACTaGTCTGGGACCTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNRRPEN*SGTCPS
Trigger: GGACGGGCAGGTCCCAGAGCAGTTCTCAGGCCTCCT...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGTCTCCTCCAGCTGCATaGTGGCCTTGTGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: AFAGWERGVLLKPGLFILSPPAA*WPCGRR
Trigger: GCGCCTGCCACAAGGCCAGCATGCAGCTGGAGGAGA...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AAGCTGTCCTCAGCCCAAGGGGGAGAATTCACAGTGTTCGGTGGTGGTAGGTGCGTCAAAGTTTCAGGGTaGGAGCGGCTGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KLSSAQGGEFTVFGGGRCVKVSG*ERLLVV
Trigger: CACCACCAACAGCCGCTCGCACCCTGAAACTTTGAC...GCACCTACCACCACCGAACACTGTGAATTCTCCCCCTTGGGCTGAGGACAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCTTTCCTAGTGGACTCTGCTATGTGTGCACGGCTGCCTATGGGCGCCGCTTCCACCAGGGTGCGGAGATaGTGTGTGAGTCAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: AFLVDSAMCARLPMGAASTRVRR*CVSQSF
Trigger: GAAACTTTGACTCACACAGCATCTCCGCACCCTGGT...GGAAGCGGCGCCCATAGGCAGCCGTGCACACATAGCAGAGTCCACTAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTAGACTCCATGTCCCGCAGGTCCTaGTCTTCCATCACATTAGAC +
Preference number: 4 (lower is better)
Translates to: AASSLVLRKAFLLSELDSMSRRS*SSITLD
Trigger: GTCTAATGTGATGGAAGAGCAGGACCTGCGGGACAT...GGAGTCTAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp TTGAGACTCCATGGCGAAGATAGAGGGGCTGTCCACACACATGCCACCCACCTCCTGCCGACCGCCCAGTaGAGGAATCATTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: LRLHGEDRGAVHTHATHLLPTAQ*RNHSDS
Trigger: TGAGTCAGAATGATTCCTGCACTGGGCGGTCGGCAG...GAGGTGGGTGGCATGTGTGTGGACAGCCCCTCTATCTTCGCCATGGAGTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAAAGGCAGCAGCAGATCTaGCGACCGCCCAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKRQQQI*RPPSAG
Trigger: TCCTGCACTGGGCGGTCGGCAGATCTGCTGCTGCCT...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp ATTTGGCCACTGAACCTTCCCATCGGGAACCCCAGAAATGGACCGGAAACCTTTTGTCATGGCGCCTCCTaGCTGTGTCCCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: IWPLNLPIGNPRNGPETFCHGAS*LCPLEA
Trigger: TGCCTCCAGGGGACACAGGCAGGAGGCGCCATGACA...AAAGGTTTCCGGTCCATTTCTGGGGTTCCCGATGGGAAGGTTCAGTGGCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCACACAGCAGTTTCCCCTaGATTTCTACTCTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAHSSFP*ISTLVQ
Trigger: CTGGACTAGAGTAGAAATGCAGGGGAAACTGCTGTG...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACCAAATTCACAGCCTTTaGTGGCTGGGAAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RASRELPLVSDAGGPRRDQIHSL*WLGKRS
Trigger: ACTCCTCTTTCCCAGCCAGCAAAGGCTGTGAATTTG...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCAGTGCATCGTAGTGTCTaGGGTTTCTTTCGGACCTAC +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPVHRSV*GFFRTY
Trigger: GTAGGTCCGAAAGAAACCGCAGACACTACGATGCAC...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGACAATACTTCTGAGCTaGTTTCTGCTGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLTILLS*FLLAWA
Trigger: TGCCCAGGCCAGCAGAAAGCAGCTCAGAAGTATTGT...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp ACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGCCAGCCTTGAGTCAGCCACGTTaGTCAGCGCATCGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TKRAAGKLKKQRRTGMPALSQPR*SAHRSS
Trigger: TGAGGAACGATGCGCTGACCAACGTGGCTGACTCAA...GGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TTGAGACTCCATGGCGAAGATAGAGGGGCTGTCCACACACATGCCACCCACCTCTGTTGTTGCGCATGGTaGGGTCCGTCAGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LRLHGEDRGAVHTHATHLCCCAW*GPSAPL
Trigger: TAGAGGAGCTGACGGACCCCACCATGCGCAACAACA...GAGGTGGGTGGCATGTGTGTGGACAGCCCCTCTATCTTCGCCATGGAGTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCACGAATGGCAGGAGATaGCATTATACAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: QPWGAISAVGILLETALPTNGRR*HYTELR
Trigger: ACGAAGCTCTGTATAATGCCATCTCCTGCCATTCGT...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCATTAGACCCCAGGAAGTaGACATCGTCAAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVALDPRK*TSSKPF
Trigger: GAATGGCTTTGACGATGTCCACTTCCTGGGGTCTAA...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp ACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGCCAGCCAGTGGGGATGACGTCTaGGAGAGCAAATCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: TKRAAGKLKKQRRTGMPASGDDV*ESKSWH
Trigger: GTGCCAAGATTTGCTCTCCCAGACGTCATCCCCACT...GGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGGAAGATGAGTTTCTCTaGCTGGTGTTGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: QLLSCCDGTASPFGGVRREDEFL*LVLPTL
Trigger: CAGAGTTGGCAACACCAGCCAGAGAAACTCATCTTC...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAAAGGTCCTCCGGGTCCTaGGCCGCACAGGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSERSSGS*AAQEMF
Trigger: GAACATTTCCTGTGCGGCCCAGGACCCGGAGGACCT...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCTTGGTCCATATCAGGTaGTTCCAGTGCGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATLVHIR*FQCGFP
Trigger: AGGAAATCCGCACTGGAACCACCTGATATGGACCAA...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TTGAGACTCCATGGCGAAGATAGAGGGGCTGTCCACACACATGCCACCCACCTCCAGGAGACACTGGCATaGGATTGGGCATCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LRLHGEDRGAVHTHATHLQETLA*DWASWS
Trigger: GGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTG...GAGGTGGGTGGCATGTGTGTGGACAGCCCCTCTATCTTCGCCATGGAGTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAATTCTGCAGGACGTGGTaGTGGCAGGCCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKFCRTW*WQAQAK
Trigger: CTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAA...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGAAAGGGACAGGAAGTTaGGCAGTTCATAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRKGTGS*AVHKEQ
Trigger: CTGCTCTTTATGAACTGCCCAACTTCCTGTCCCTTT...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGAGACAAATCACAAATTaGCAAGTAGCAACCTTAGCT +
Preference number: 4 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGRQITN*QVATLA
Trigger: AGCTAAGGTTGCTACTTGCCAATTTGTGATTTGTCT...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAATTCACAGCCTTTGCTaGCTGGGAAAGAGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAIHSLC*LGKRSV
Trigger: AACACTCCTCTTTCCCAGCCAGCAAAGGCTGTGAAT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AAGCTGTCCTCAGCCCAAGGGGGAGAATTCACAGTGTTCGGTGGTGGTAGGTGCGCCTGGCGCATATCTTaGGCCCTCACAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: KLSSAQGGEFTVFGGGRCAWRIS*ALTESS
Trigger: ACTGCTTTCTGTGAGGGCCCAAGATATGCGCCAGGC...GCACCTACCACCACCGAACACTGTGAATTCTCCCCCTTGGGCTGAGGACAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CAA 72 bp ATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTaGGGTTTTGACTGCCCTGGCCGACTGGCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: MGGYAGPTQFID*GFDCPGRLAFL
Trigger: TAGGAAAGCCAGTCGGCCAGGGCAGTCAAAACCCAAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTAGACTCCACCCTGAGACTTCTGTaGTATGGAGTCCATACTGGA +
Preference number: 4 (lower is better)
Translates to: AASSLVLRKAFLLSELDSTLRLL*YGVHTG
Trigger: TCCAGTATGGACTCCATATCACAGAAGTCTCAGGGT...GGAGTCTAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp AAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCACCGGGCTGCACTCCCATaGATCCTAGGTCTCATGGAC +
Preference number: 4 (lower is better)
Translates to: KGHAGEHRCTVTLFSLFHRAALP*ILGLMD
Trigger: GTCCATGAGACCTAGGATTCATGGGAGTGCAGCCCG...GTGGAAAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCACAGCGTCCTCTGTGGGTaGGCAGGTCAGGAGATCAGA +
Preference number: 4 (lower is better)
Translates to: KGHAGEHRCTVTLFSLFHSVLCG*AGQEIR
Trigger: TCTGATCTCCTGACCTGCTCACCCACAGAGGACGCT...GTGGAAAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGCACAGGACTCGAAGATaGGTTTCTCTGGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQEHRTRR*VSLAGV
Trigger: AACACCAGCCAGAGAAACTCATCTTCGAGTCCTGTG...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGATCCCTCGCAGATCTTTaGTCAGCATGGAGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRSLADL*SAWSPD
Trigger: ATCTGGGCTCCATGCTGATCAAAGATCTGCGAGGGA...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGTCTCGTGCTCTGCAATaGCGTTCTTGTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQESRALQ*RSCWRH
Trigger: ATGCCTCCAACAAGAACGTCATTGCAGAGCACGAGA...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTCTTCAGAGCTGCAGGTaGGGCGATGGCGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KPLSCSGASKAVFLREACLQSCR*GDGGGG
Trigger: GCCACCACCGCCATCGCCTCACCTGCAGCTCTGAAG...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GGCTGCCTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTTGCGAACAAGTCACTTCTTaGCCCTCTGGAATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GCLWAPLPSCLLPSKLICEQVTS*PSGMPV
Trigger: GACTGGCATTCCAGAGGGTCAAGAAGTGACTTGTTC...GCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCAATTCATCCTGGGACCTaGTTGACCTATGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPIHPGT*LTYARK
Trigger: TTTCCTGGCATAGGTCAATCAGGTCCCAGGATGAAT...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGGGTCTGCCCCTGGTGTaGCCTGCACTTGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: AFAGWERGVLLKPGLFILGLPLV*PALGEV
Trigger: CACTTCTCCAAGTGCAGGTCACACCAGGGGCAGACC...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCGGCTGCAGCCGAGCCTaGTCGGGCTCCCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFIGCSRA*SGSQTF
Trigger: GAAAGTTTGGGAGCCCGAGCAGGCTCGGCTGCAGCC...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACCTCATGCAAAGCACTaGCCATCTCCGTCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRPHAKH*PSPSGS
Trigger: ACTACCAGACGGAGATGGGCAGTGCTTTGCATGAGG...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTAGGTTTCACTCCTGCTaGCTCAGCCTCCTTGTTCGT +
Preference number: 4 (lower is better)
Translates to: APKATRGSIDALSPYLAFRFHSC*LSLLVR
Trigger: ACGAACAAGGAGGCTGAGGCAGCAGGAGTGAAACCT...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGTTTTCTTCCCAATGCTaGAGTTGGATAAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRFSSQC*SWIRTH
Trigger: GTGAGTCCTTATCCAACTGCAGCATTGGGAAGAAAA...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR GCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCACATTCAGAAGCAACTTaGTCTCATACTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPHSEAT*SHTAAA
Trigger: GGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATG...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCAGGCAGCAGCAGATCTaGCGACCGCCCAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFIRQQQI*RPPSAG
Trigger: TCCTGCACTGGGCGGTCGGCAGATCTGCTGCTGCCT...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCAGGGATCTTCTTCATGTaGTCCGTAGATTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPGIFFM*SVDFRI
Trigger: GATGCGGAAATCTACGGAGCACATGAAGAAGATCCC...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp ATTTGGCCACTGAACCTTCCCATCGGGAACCCCAGAAATGGACCGGAAACCTTTGCTAGCGGCCTGGAGTaGTTCTCCACAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: IWPLNLPIGNPRNGPETFASGLE*FSTAKA
Trigger: TGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC...AAAGGTTTCCGGTCCATTTCTGGGGTTCCCGATGGGAAGGTTCAGTGGCCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCAGGGACGCAGAGAGCTaGACACGCAGAGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFIRDAES*TRRACR
Trigger: CCGACAGGCTCTGCGTGTGCAGCTCTCTGCGTCCCT...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCTAATGTCTCTGACTaGAGCTCTGCCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: APKATRGSIDALSPYLAFSNVSD*SSACSL
Trigger: CAGGGAGCAGGCAGAGCTGCAGTCAGAGACATTAGA...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATGGCTGTCCACACACATaGCACCCACCTCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNGCPHT*HPPPWR
Trigger: CCTCCAAGGAGGTGGGTGGCATGTGTGTGGACAGCC...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAACTATGTGTGCACGGCTaGCTATGGGCGCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKLCVHG*LWAPLP
Trigger: AGGAAGCGGCGCCCATAGGCAGCCGTGCACACATAG...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTTTAACCAATGGGGCCTaGGGACGGTGGAGGAAATGG +
Preference number: 4 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLLTNGA*GRWRKW
Trigger: CCATTTCCTCCACCGTCCGCAGGCCCCATTGGTTAA...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTTGGACCACGGCTTTGTaGCCATTCCTTGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLWTTAL*PFLAAK
Trigger: CTTGGCAGCAAGGAATGGCCACAAAGCCGTGGTCCA...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATGCATCGAGGAGGACCTaGACCACGGCTTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNASRRT*TTALWP
Trigger: TGGCCACAAAGCCGTGGTCCAGGTCCTCCTCGATGC...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACAGGGCAGTCAGTCCATaGTTATCTTTTATGTTGACG +
Preference number: 4 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDRAVSP*LSFMLT
Trigger: CGTCAACATAAAAGATAACCATGGACTGACTGCCCT...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCAGAAGATGAGTTTCTCTaGCTGGTGTTGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPEDEFL*LVLPTL
Trigger: CAGAGTTGGCAACACCAGCCAGAGAAACTCATCTTC...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAAAGGCGCCCGTCGCCCTaGACTTCTGGGCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQRRPSP*TSGPAG
Trigger: CCCTGCAGGCCCAGAAGTCCAGGGCGACGGGCGCCT...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCTTCTGCAGGACGTGGTaGTGGCAGGCCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFIFCRTW*WQAQAK
Trigger: CTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAA...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCAGCAGAAAGATCGGATaGCAAAGGCACAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: ALLMPTSKATHPLKLSSASRKIG*QRHSET
Trigger: AGTCTCACTGTGCCTTTGCCATCCGATCTTTCTGCT...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCGTCACAGTGGTTGGTTaGTTCAGGAGAGGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGVTVVG*FRRGEN
Trigger: GTTCTCACCTCTCCTGAACCAACCAACCACTGTGAC...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAATCTGAGCTGCTGCGATaGGACGGCCTCTCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKSELLR*DGLSFR
Trigger: CCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGA...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATAGGCACAAGGATGGGTaGGTACGCAGGACCCACCCA +
Preference number: 4 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNRHKDG*VRRTHP
Trigger: TGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCT...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCATCTTCTGCCGTTCCTaGGAAAAGTCAATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QRLSSTIPASELLRWDGLIFCRS*EKSIPS
Trigger: AGAAGGGATTGACTTTTCTCAGGAACGGCAGAAGAT...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTCTGGAAGGAGAGAGTTaGGGACAGCAGAAAGATCGG +
Preference number: 4 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLLEGES*GQQKDR
Trigger: CCGATCTTTCTGCTGTCCTCAACTCTCTCCTTCCAG...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGATCTCGAATTTGTTGTTaGGCATGGTGGGGTCCGTCA +
Preference number: 4 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRSRICC*AWWGPS
Trigger: TGACGGACCCCACCATGCGCAACAACAAATTCGAGA...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp TTAAAAACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGTCGCCCGTACAGTGCTaGCAGGTCCAAAGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LKTKRAAGKLKKQRRTGMSPVQC*QVQRGL
Trigger: GAGACCCCTTTGGACCTGGCAGCACTGTACGGGCGA...CATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGTTTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCCAGGAGGTTGGGGTGTaGATTAAGGAGCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGQEVGV*IKEHFH
Trigger: GTGAAAATGCTCCTTAATGCACACCCCAACCTCCTG...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAAGTGGCCATTCCTTGCTaGCAAGTGCAGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKVAIPC*QVQRGV
Trigger: CACACCCCTCTGCACTTGGCAGCAAGGAATGGCCAC...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGAAACAAAGCAGCCTCATaGAAAGCACTGCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRNKAAS*KALPIS
Trigger: GGAGATGGGCAGTGCTTTGCATGAGGCTGCTTTGTT...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAATCAGTTCAGTCACTaGTTTCTCCACGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGNQFSH*FLHVTL
Trigger: CAGGGTGACGTGGAGAAAGCAGTGACTGAACTGATT...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGAAGGAGGCCTGAGAACTaGTCTGGGACCTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGRRPEN*SGTCPS
Trigger: GGACGGGCAGGTCCCAGAGCAGTTCTCAGGCCTCCT...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATAGCTTGGCCTCACGGTaGTCCTCCTGGATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNSLASR*SSWILK
Trigger: CTTCAGGATCCAGGAGGAGCACCGTGAGGCCAAGCT...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGATGTTCCGGATCTCGTaGTCTGCAATGACGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQEMFRIS*SAMTFL
Trigger: CAAGAACGTCATTGCAGAGCACGAGATCCGGAACAT...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGAGGCCTGGCGCTCTGGTaGTGGCTAAGACTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGGLALW*WLRLPS
Trigger: GCTGGGAAGTCTTAGCCAGCACCAGAGCGCCAGGCC...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACCCTAACAGTACTCCCTaGACATACATACCAACAAAG +
Preference number: 4 (lower is better)
Translates to: RASRELPLVSDAGGPRRDPNSTP*TYIPTK
Trigger: CTTTGTTGGTATGTATGTGCAGGGAGTACTGTTAGG...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp TTCCTGGTCAACTCTTGGAAGAAAGCCGGGGCCGAGAACTGTACAGCGGTAGCTCTGCACTTGGAGAAGTaGAAAAGTAGGGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: FLVNSWKKAGAENCTAVALHLEK*KSRGLP
Trigger: GGGAAGGCCCCTACTTTTGCACTTCTCCAAGTGCAG...AGCTACCGCTGTACAGTTCTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp ATTTGGCCACTGAACCTTCCCATCGGGAACCCCAGAAATGGACCGGAAACCTTTCTTTGCTGGAGGTGGTaGACGTTCCCTAGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: IWPLNLPIGNPRNGPETFLCWRW*TFPRPH
Trigger: GTGAGGCCTAGGGAACGTCCACCACCTCCAGCAAAG...AAAGGTTTCCGGTCCATTTCTGGGGTTCCCGATGGGAAGGTTCAGTGGCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTCTTCATCGGGCGGTaGCTTTGCTGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFILFIGR*LCWRWW
Trigger: CCACCACCTCCAGCAAAGCCACCGCCCGATGAAGAG...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCATGGAGCCCAGATAATTaGCTTCATAACCACAGGACT +
Preference number: 4 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPWSPDN*LHNHRT
Trigger: AGTCCTGTGGTTATGAAGCCAATTATCTGGGCTCCA...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTCAGGCCCAGGCCAAGTaGCCAAGAGGAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KPLSCSGASKAVFLREACQAQAK*PRGGPA
Trigger: TGCAGGACCTCCTCTTGGCCACTTGGCCTGGGCCTG...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGAGTGGAGACAGGGAGTaGGTTGTTTTAGAAGATAGT +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLSGDRE*VVLEDS
Trigger: ACTATCTTCTAAAACAACCCACTCCCTGTCTCCACT...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATACAATGGAGGCCACTTaGTCCAGGTCCCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNTMEAT*SRSLSS
Trigger: GGAGGACAGGGACCTGGACCAAGTGGCCTCCATTGT...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
3UTR CAA 72 bp CCCACAGGAGGAACTGGGCACACAGCTGAGCCAACTTaGCCTCTCAAATCCACAGCAGTTTCCCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: PTGGTGHTAEPT*PLKSTAVSPAF
Trigger: AAATGCAGGGGAAACTGCTGTGGATTTGAGAGGCAAAGTTGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CAA 72 bp GTCTACTCTGGATGCTTTAGGGTTCCTGGTCAACTCTaGGAAGAAAGCCGGGGCCGAGAACTGTACAGCGGT +
Preference number: 4 (lower is better)
Translates to: VYSGCFRVPGQL*EESRGRELYSG
Trigger: ACCGCTGTACAGTTCTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAACCCTAAAGCATCCAGAGTAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CAA 72 bp GCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTaGCCCACACTGGAGAATGGGGTGCCTCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: AASFLSPAIQTD*PTLENGVPLQR
Trigger: TCTTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTCATTGTTCTGTTCATTaGCTCTGGTGTGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: APKATRGSIDALSPYLAFHCSVH*LWCVKA
Trigger: GGCCTTCACACACCAGAGTCAATGAACAGAACAATG...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp ACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGCCAGCCGGTTATCTTTTATGTTaGCGTCAGTTCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TKRAAGKLKKQRRTGMPAGYLLC*RQFLQP
Trigger: TGGCTGCAGGAACTGACGTCAACATAAAAGATAACC...GGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GTGTGCAGGGCACAGGCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCCTTTTTCCAGTCATGTaGTCTTCAATTAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: VCRAQAASSLVLRKAFLLLFPVM*SSINAA
Trigger: AGCAGCATTAATTGAAGATCACATGACTGGAAAAAG...GAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTGTGCCCTGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAAGGACCTTCAGGACATTaGCGAGCTCTAGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKGPSGH*RALAPR
Trigger: TCTGGGAGCTAGAGCTCGTCAATGTCCTGAAGGTCC...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAATCCCTCGCAGATCTTTaGTCAGCATGGAGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSESLADL*SAWSPD
Trigger: ATCTGGGCTCCATGCTGATCAAAGATCTGCGAGGGA...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp TTCCTGGTCAACTCTTGGAAGAAAGCCGGGGCCGAGAACTGTACAGCGGTAGCTTCACATCCACGGTGCTaGACACATGGCAATAGTGGT +
Preference number: 4 (lower is better)
Translates to: FLVNSWKKAGAENCTAVASHPRC*THGNSG
Trigger: ACCACTATTGCCATGTGTTCAGCACCGTGGATGTGA...AGCTACCGCTGTACAGTTCTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GGTAGGTGCGAGAGCTGCAAGTGTACAGCGTCTACGCTGCCGCCCGCCCAAGAGAAAAACAATGTGTTCTaGACAAGTCACTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: GRCESCKCTASTLPPAQEKNNVF*TSHFLT
Trigger: GGTCAAGAAGTGACTTGTTCAGAACACATTGTTTTT...CTCTTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCCTGTGTCTAGCCCCTaGAAGGGACAGGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFIPVSSP*KGQEVG
Trigger: CCCAACTTCCTGTCCCTTTCAGGGGCTAGACACAGG...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAAAGTCCTGGCTCCGGCTaGTGCTGCTCCGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQSPGSG*CCSACG
Trigger: ACCACAGGCGGAGCAGCAGCAGCCGGAGCCAGGACT...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGACTCGTACGGTCTGTCTaGGAGGGAGGCGATGATGCG +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGLVRSV*EGGDDA
Trigger: CGCATCATCGCCTCCCTCGCAGACAGACCGTACGAG...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AAGCTGTCCTCAGCCCAAGGGGGAGAATTCACAGTGTTCGGTGGTGGTAGGTGCGGGATCTTCTTCATGTaGTCCGTAGATTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: KLSSAQGGEFTVFGGGRCGIFFM*SVDFRI
Trigger: GATGCGGAAATCTACGGAGCACATGAAGAAGATCCC...GCACCTACCACCACCGAACACTGTGAATTCTCCCCCTTGGGCTGAGGACAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTGCCACTTCGAAGGCCTaGCCCAGCGTCAGGATGATC +
Preference number: 4 (lower is better)
Translates to: KPLSCSGASKAVFLREACATSKA*PSVRMI
Trigger: GATCATCCTGACGCTGGGGCAGGCCTTCGAAGTGGC...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTAAGTGGAGGAGGGCCTaGCTCTACCGCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: KPLSCSGASKAVFLREACKWRRA*LYRRES
Trigger: GCTCTCTCTGCGGTAGAGGCAGGCCCTCCTCCACTT...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGGTCAGTCTATGTTGTTaGACAGATTGGTTATGTTTG +
Preference number: 4 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRVSLCC*TDWLCL
Trigger: CAAACATAACCAATCTGTGCAACAACATAGACTGAC...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp ACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGCCAGCCACGAATGGCAGGAGATaGCATTATACAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: TKRAAGKLKKQRRTGMPATNGRR*HYTELR
Trigger: ACGAAGCTCTGTATAATGCCATCTCCTGCCATTCGT...GGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGATGCTGTCCAACGAATaGCAGGAGATGGCATTATAC +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQEMLSNE*QEMALY
Trigger: GTATAATGCCATCTCCTGCCATTCGTTGGACAGCAT...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TTCCTGGTCAACTCTTGGAAGAAAGCCGGGGCCGAGAACTGTACAGCGGTAGCTCAGCCTCCTTGTTCGTaGAGTCTTGGTCAGATGATC +
Preference number: 4 (lower is better)
Translates to: FLVNSWKKAGAENCTAVAQPPCS*SLGQMI
Trigger: GATCATCTGACCAAGACTCCACGAACAAGGAGGCTG...AGCTACCGCTGTACAGTTCTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTCTGCTGCTCCGCCTGTaGTCTTTTGTTTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLLLLRL*SFVFPS
Trigger: GGATGGAAAAACAAAAGACCACAGGCGGAGCAGCAG...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGATCACGGTGCTCCTCCTaGATCCTGAAGCGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGSRCSS*ILKRSA
Trigger: AGCGGAGCGCTTCAGGATCCAGGAGGAGCACCGTGA...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGTGGAGCCCAGATAATTaGCTTCATAACCACAGGACT +
Preference number: 4 (lower is better)
Translates to: RVLGTLALGGHSGWLVQEWSPDN*LHNHRT
Trigger: AGTCCTGTGGTTATGAAGCCAATTATCTGGGCTCCA...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAACACAGGCGTCTTGCGTaGATTCTGTCCCTCGCAGAT +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKHRRLA*ILSLAD
Trigger: ATCTGCGAGGGACAGAATCCACGCAAGACGCCTGTG...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAATGGCGGTGGTGGCAGTaGGAGCCTATGCCCCCACGT +
Preference number: 4 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQWRWWQ*EPMPPR
Trigger: ACGTGGGGGCATAGGCTCCCACTGCCACCACCGCCA...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCATTTGTCTAAAGATTaGCAGTATGACCTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAHLSKD*QYDLEV
Trigger: AACCTCTAGGTCATACTGCCAATCTTTAGACAAATG...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGAGACCCAATTCAGACTaGTTTTCTAATGTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLRPNSD*FSNVSD
Trigger: GTCAGAGACATTAGAAAACCAGTCTGAATTGGGTCT...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAAAGCTATCAGTGCCGTTaGGATCCTGCTGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKSYQCR*DPAGDC
Trigger: GCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCT...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTGGAGCTGTAACCACTTaGCAAGAAGGAATGGACGTA +
Preference number: 4 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLGAVTT*QEGMDV
Trigger: TACGTCCATTCCTTCTTGTCAAGTGGTTACAGCTCC...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR TCA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGGTGCAGGAATCATTCTaGCTCAGTGGGGATGACGTC +
Preference number: 4 (lower is better)
Translates to: AFAGWERGVLLKPGLFILVQESF*LSGDDV
Trigger: GACGTCATCCCCACTGAGTCAGAATGATTCCTGCAC...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGAGTGGCCATTCCTTGCTaGCAAGTGCAGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGVAIPC*QVQRGV
Trigger: CACACCCCTCTGCACTTGGCAGCAAGGAATGGCCAC...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAATTTGTGGCCATTCCTTaGTGCCAAGTGCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKFVAIP*CQVQRG
Trigger: ACCCCTCTGCACTTGGCAGCAAGGAATGGCCACAAA...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATAGCAGGTTTCACTCCTaGTGCCTCAGCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNSRFHS*CLSLLV
Trigger: AACAAGGAGGCTGAGGCAGCAGGAGTGAAACCTGCT...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGTTGCTCTCATACTGCTaGAGCCCAATCGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: AFAGWERGVLLKPGLFILLLSYC*SPIDSS
Trigger: GCTGGAGTCGATTGGGCTGCAGCAGTATGAGAGCAA...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCACCGGAAACCTTTGAGTTaGTCAGGTGCCTCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: KGHAGEHRCTVTLFSLFHRKPLS*SGASKA
Trigger: AGCCTTAGAGGCACCTGAGCAACTCAAAGGTTTCCG...GTGGAAAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTCATGGGTTAAGAATGTaGCTAACAGTACTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: APKATRGSIDALSPYLAFHGLRM*LTVLPA
Trigger: TGCAGGGAGTACTGTTAGGCACATTCTTAACCCATG...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TTAAAAACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGTGGACCACGGCTTTGTaGCCATTCCTTGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LKTKRAAGKLKKQRRTGMWTTAL*PFLAAK
Trigger: CTTGGCAGCAAGGAATGGCCACAAAGCCGTGGTCCA...CATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGTTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TTGAGACTCCATGGCGAAGATAGAGGGGCTGTCCACACACATGCCACCCACCTCTCTTCACGGTGTCAATaGAGCTGTAACCACTTGACA +
Preference number: 4 (lower is better)
Translates to: LRLHGEDRGAVHTHATHLSSRCQ*SCNHLT
Trigger: TGTCAAGTGGTTACAGCTCCATTGACACCGTGAAGA...GAGGTGGGTGGCATGTGTGTGGACAGCCCCTCTATCTTCGCCATGGAGTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp TTCCTGGTCAACTCTTGGAAGAAAGCCGGGGCCGAGAACTGTACAGCGGTAGCTATGAGTTTCTCTGGCTaGTGTTGCCAACTCTGCACT +
Preference number: 4 (lower is better)
Translates to: FLVNSWKKAGAENCTAVAMSFSG*CCQLCT
Trigger: AGTGCAGAGTTGGCAACACCAGCCAGAGAAACTCAT...AGCTACCGCTGTACAGTTCTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTACACTGGCATGGGATTaGGCATCTTGGTCCATATCA +
Preference number: 4 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLTLAWD*ASWSIS
Trigger: TGATATGGACCAAGATGCCCAATCCCATGCCAGTGT...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGTGTTGTTGCACAGATTaGTTATGTTTGGTACCTCAA +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLCCCTD*LCLVPQ
Trigger: TTGAGGTACCAAACATAACCAATCTGTGCAACAACA...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGATATTTACACTCTCTTaGGTACTGAGGTCAGTCTAT +
Preference number: 4 (lower is better)
Translates to: PSASGLECFSTAKAGLVLIFTLS*VLRSVY
Trigger: ATAGACTGACCTCAGTACCCAAGAGAGTGTAAATAT...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGAAAGGCCCTTGATGGATaGGCAACCGCACTATCTGGG +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGKALDG*ATALSG
Trigger: CCCAGATAGTGCGGTTGCTCATCCATCAAGGGCCTT...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGCTTTTTCCAGTCATGTaGTCTTCAATTAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLLFPVM*SSINAA
Trigger: AGCAGCATTAATTGAAGATCACATGACTGGAAAAAG...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGCACAGGACTCGAAGATaGGTTTCTCTGGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: AFAGWERGVLLKPGLFILHRTRR*VSLAGV
Trigger: AACACCAGCCAGAGAAACTCATCTTCGAGTCCTGTG...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp TTAAAAACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGATCCTGGGACCTGATTaGCCTATGCCAGGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LKTKRAAGKLKKQRRTGMILGPD*PMPGKL
Trigger: GAGCTTTCCTGGCATAGGTCAATCAGGTCCCAGGAT...CATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp ATTTGGCCACTGAACCTTCCCATCGGGAACCCCAGAAATGGACCGGAAACCTTTGCACAAAAGACAGCTTaGGGAGTGCATCGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: IWPLNLPIGNPRNGPETFAQKTA*GVHRSV
Trigger: GACACTACGATGCACTCCTCAAGCTGTCTTTTGTGC...AAAGGTTTCCGGTCCATTTCTGGGGTTCCCGATGGGAAGGTTCAGTGGCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAATCCATTGCCACACCATaGGCAACAATACTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSESIATP*ATILLS
Trigger: GCTCAGAAGTATTGTTGCTCATGGTGTGGCAATGGA...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAATTGGTTCAGGAGAGGTaGGAACAGTCAGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKLVQER*EQSASS
Trigger: AGAGCTAGCTGACTGTTCTCACCTCTCCTGAACCAA...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR GCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCTCTCCGTCTGGTAGTTaGTGTCCATGCCAGCATCGA +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFISPSGS*CPCQHR
Trigger: TCGATGCTGGCATGGACAGCAACTACCAGACGGAGA...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCCTCATGCAAAGCACTaGCCATCTCCGTCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFIPHAKH*PSPSGS
Trigger: ACTACCAGACGGAGATGGGCAGTGCTTTGCATGAGG...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCAGCAACCGCACTATCTaGGCATCTCCTTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFISNRTI*ASPFQA
Trigger: AGCCTGGAAAGGAGATGCCCAGATAGTGCGGTTGCT...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACGGGCGGTGGCTTTGCTaGAGGTGGTGGACGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYGRWLC*RWWTFP
Trigger: AGGGAACGTCCACCACCTCCAGCAAAGCCACCGCCC...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAAAGTGTTGCTGAAGCCTaGATTATTCATCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSESVAEA*IIHPGT
Trigger: GGTCCCAGGATGAATAATCCAGGCTTCAGCAACACT...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGATGGACAAGAAGCCTGTaGCTGGGACAGGTACTGAGC +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGWTRSL*LGQVLS
Trigger: GCTCAGTACCTGTCCCAGCCACAGGCTTCTTGTCCA...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CAA 72 bp TTCCCATCGGGAACCCCAGAAATGGACCGGAAACCTTaGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: FPSGTPEMDRKP*SCSGASKAVFL
Trigger: TAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTTCCGGTCCATTTCTGGGGTTCCCGATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGACCCTGAGACTTCTGTaGTATGGAGTCCATACTGGA +
Preference number: 4 (lower is better)
Translates to: AFAGWERGVLLKPGLFILTLRLL*YGVHTG
Trigger: TCCAGTATGGACTCCATATCACAGAAGTCTCAGGGT...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGAGTTGACGTCAGTTCCTaGAGCCAGCAGGATTTGCAC +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGVDVSS*SQQDLH
Trigger: GTGCAAATCCTGCTGGCTGCAGGAACTGACGTCAAC...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGACACTGGCATGGGATTaGGCATCTTGGTCCATATCA +
Preference number: 4 (lower is better)
Translates to: AFAGWERGVLLKPGLFILTLAWD*ASWSIS
Trigger: TGATATGGACCAAGATGCCCAATCCCATGCCAGTGT...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGACAACCCAGGAGACACTaGCATGGGATTGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGQPRRH*HGIGHL
Trigger: AAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTG...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGAACAGCCTTTGCTGGCTaGGAAAGAGGAGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGTAFAG*ERGVLL
Trigger: CAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTGAGCAACAATACTTCTaGGCTGCTTTCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KPLSCSGASKAVFLREACEQQYF*AAFCWP
Trigger: AGGCCAGCAGAAAGCAGCTCAGAAGTATTGTTGCTC...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCAATCAGTTCAGTCACTaGTTTCTCCACGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFINQFSH*FLHVTL
Trigger: CAGGGTGACGTGGAGAAAGCAGTGACTGAACTGATT...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAATTTTCTTCCCAATGCTaGAGTTGGATAAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSEFSSQC*SWIRTH
Trigger: GTGAGTCCTTATCCAACTGCAGCATTGGGAAGAAAA...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TTAAAAACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGTCGACCACATCCTTATaGCCATTCAAAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LKTKRAAGKLKKQRRTGMSTTSL*PFKAAW
Trigger: CCATGCTGCTTTGAATGGCCATAAGGATGTGGTCGA...CATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAACAGATGATCGCCCGCTaGCCATGCTGTCCAACGAAT +
Preference number: 4 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQQMIAR*PCCPTN
Trigger: ATTCGTTGGACAGCATGGCCAGCGGGCGATCATCTG...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTCTGCTGCTCCGCCTGTaGTCTTTTGTTTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: KPLSCSGASKAVFLREACLLLRL*SFVFPS
Trigger: GGATGGAAAAACAAAAGACCACAGGCGGAGCAGCAG...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTTGGGAGAGCAAATCTTaGCACCTCAGCTGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: KPLSCSGASKAVFLREACWESKS*HLSWEN
Trigger: ATTCTCCCAGCTGAGGTGCCAAGATTTGCTCTCCCA...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAAACACTTATCTTCATTTaGCCACTGAACCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSETLIFI*PLNLPI
Trigger: GATGGGAAGGTTCAGTGGCCAAATGAAGATAAGTGT...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCCCACTTCTGATTTCTaGCCAACCACATGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFIPTSDF*PTTWVK
Trigger: CTTAACCCATGTGGTTGGCCAGAAATCAGAAGTGGG...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CAA 72 bp AAATTCACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTaGCTGAAGCCTGGATTATTCATCCTGGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: KFTAFAGWERGV*LKPGLFILGPD
Trigger: ATCAGGTCCCAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGTGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp GTACTGAGCCCATCTGAAGTCTCCCACCCGAATGGGCTCCTTCACAGTTCAGAAAGAAACACCTATGGATaGTCTAAGCACAAAAGACAG +
Preference number: 4 (lower is better)
Translates to: VLSPSEVSHPNGLLHSSERNTYG*SKHKRQ
Trigger: CTGTCTTTTGTGCTTAGATCATCCATAGGTGTTTCT...TTCTGAACTGTGAAGGAGCCCATTCGGGTGGGAGACTTCAGATGGGCTCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAATACTGCGCTGCACAATaGAGGGCTGTCTCGTTGTCA +
Preference number: 4 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQYCAAQ*RAVSLS
Trigger: TGACAACGAGACAGCCCTGCATTGTGCAGCGCAGTA...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAATTTGTGGCCATTCCTTaGTGCCAAGTGCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQFVAIP*CQVQRG
Trigger: ACCCCTCTGCACTTGGCAGCAAGGAATGGCCACAAA...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp TTAAAAACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGGCCTTTTCTTCCCAATaGTGCAGTTGGATAAGGACT +
Preference number: 4 (lower is better)
Translates to: LKTKRAAGKLKKQRRTGMAFSSQ*CSWIRT
Trigger: AGTCCTTATCCAACTGCAGCATTGGGAAGAAAAGGC...CATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAAGACCTGATTGACCTATaGCAGGAAAGCTCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQDLIDL*QESSEP
Trigger: AGGCTCCGAGCTTTCCTGGCATAGGTCAATCAGGTC...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGAGCAGTCTACTCTGGATaGTTTAGGGTTCCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGAVYSG*FRVPGQ
Trigger: TTGACCAGGAACCCTAAAGCATCCAGAGTAGACTGC...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGAAACACAGTTCACATTTaGCCCTCTCCACATGCTGAG +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGNTVHI*PSPHAE
Trigger: CTCAGCATGTGGAGAGGGCCAAATGTGAACTGTGTT...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCGAGCAGCAGCTGATATaGTTGGGTTTGAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TAFAGWERGVLLKPGLFIEQQLI*LGLKSR
Trigger: TCTGCTTTTCAAACCCAACCATATCAGCTGCTGCTC...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp TTAAAAACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGTTCTGGCCAACCACATaGGTTAAGAATGTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: LKTKRAAGKLKKQRRTGMFWPTT*VKNVPN
Trigger: GTTAGGCACATTCTTAACCCATGTGGTTGGCCAGAA...CATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTATCTTCTGCCGTTCCTaGGAAAAGTCAATCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KPLSCSGASKAVFLREACIFCRS*EKSIPS
Trigger: AGAAGGGATTGACTTTTCTCAGGAACGGCAGAAGAT...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp AAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCACAAAAACAATGTGTTCTaGACAAGTCACTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: KGHAGEHRCTVTLFSLFHKNNVF*TSHFLT
Trigger: GGTCAAGAAGTGACTTGTTCAGAACACATTGTTTTT...GTGGAAAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAATCCCAATGCTGCAGTTaGATAAGGACTCACTCCGAC +
Preference number: 4 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQSQCCS*IRTHSD
Trigger: GTCGGAGTGAGTCCTTATCCAACTGCAGCATTGGGA...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTTCTTCACGGTGTCAATaGAGCTGTAACCACTTGACA +
Preference number: 4 (lower is better)
Translates to: KPLSCSGASKAVFLREACSSRCQ*SCNHLT
Trigger: TGTCAAGTGGTTACAGCTCCATTGACACCGTGAAGA...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAATTTAGTACCAAGAAGTaGAGGAGGGCCTGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQFSTKK*RRACLY
Trigger: GTAGAGGCAGGCCCTCCTCCACTTCTTGGTACTAAA...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR TCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACGCTTTTCCTATTCTCTaGCACAACGCAGGCAGTACG +
Preference number: 4 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYAFPIL*HNAGST
Trigger: CGTACTGCCTGCGTTGTGTCAGAGAATAGGAAAAGC...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACTCTCGAATTTGTTGTTaGGCATGGTGGGGTCCGTCA +
Preference number: 4 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYSRICC*AWWGPS
Trigger: TGACGGACCCCACCATGCGCAACAACAAATTCGAGA...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACAGACAGCTTGAGGAGTaGATCGTAGTGTCTGCGGTT +
Preference number: 4 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYRQLEE*IVVSAV
Trigger: AACCGCAGACACTACGATGCACTCCTCAAGCTGTCT...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp AAGCACAAAAGACAGCTTGAGGAGTGCATCGTAGTGTCTGCGGTTTCTTTCGGATACAGTTCAGTCCATTaGCACACCATGAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: KHKRQLEECIVVSAVSFGYSSVH*HTMSNN
Trigger: ATTGTTGCTCATGGTGTGGCAATGGACTGAACTGTA...TCCGAAAGAAACCGCAGACACTACGATGCACTCCTCAAGCTGTCTTTTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTAGGGCAGTCAGTCCATaGTTATCTTTTATGTTGACG +
Preference number: 4 (lower is better)
Translates to: KPLSCSGASKAVFLREACRAVSP*LSFMLT
Trigger: CGTCAACATAAAAGATAACCATGGACTGACTGCCCT...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CAA 72 bp AGTTGGGCAGTTCATAAAGAGCAGCAGCTGATATGGTaGGGTTTGAAAAGCAGACGCACCGTACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: SWAVHKEQQLIW*GLKSRRTVLNS
Trigger: AGAATTGAGTACGGTGCGTCTGCTTTTCAAACCCAACCATATCAGCTGCTGCTCTTTATGAACTGCCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR GCA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACCAGGAGGTTGGGGTGTaGATTAAGGAGCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYQEVGV*IKEHFH
Trigger: GTGAAAATGCTCCTTAATGCACACCCCAACCTCCTG...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CCA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAACTGGATTATTCATCCTaGGACCTGATTGACCTATGC +
Preference number: 4 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQLDYSS*DLIDLC
Trigger: GCATAGGTCAATCAGGTCCCAGGATGAATAATCCAG...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
3UTR CAA 72 bp GAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTaGGTACCTCAAAGTGTTTATAATTCAGACAAAATC +
Preference number: 4 (lower is better)
Translates to: EVSLCCCTDWLC*VPQSVYNSDKI
Trigger: GATTTTGTCTGAATTATAAACACTTTGAGGTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS TCA 90 bp GCCGCCGCCGCCCCCAGAGCCACCGCCGCCGCCGCCCCCAAAGCCTaGGGAGAGCCGCTTCCCGGACAGCAGCTTCTCCACCGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: AAAAPRATAAAAPKA*GEPLPGQQLLHRRE
Trigger: CTCCCGGCGGTGGAGAAGCTGCTGTCCGGGAAGCGGCTCTCCTCAGGCTTTGGGGGCGGCGGCGGCGGTGGCTCTGGGGGCGGCGGCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 90 bp GAGCCGTGGAGGAGGCCTGAGAACTGCTCTGGGACCTGCCCGTCCTaGCCCTCCGCAGAGTCCTGGCTCCGGCTGCTGCTGCTCCGCCTG +
Preference number: 5 (lower is better)
Translates to: EPWRRPENCSGTCPS*PSAESWLRLLLLRL
Trigger: CAGGCGGAGCAGCAGCAGCCGGAGCCAGGACTCTGCGGAGGGGCAGGACGGGCAGGTCCCAGAGCAGTTCTCAGGCCTCCTCCACGGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 90 bp CCCACCTCGCACACCGGGGAGGAGCCGTGGAGGAGGCCTGAGAACTaGTCTGGGACCTGCCCGTCCTGCCCCTCCGCAGAGTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: PTSHTGEEPWRRPEN*SGTCPSCPSAESWL
Trigger: GAGCCAGGACTCTGCGGAGGGGCAGGACGGGCAGGTCCCAGAGCAGTTCTCAGGCCTCCTCCACGGCTCCTCCCCGGTGTGCGAGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAGGCCGCAGGGTCAGCTaGGCCTCACGGTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPGRRVS*ASRCSS
Trigger: GGAGGAGCACCGTGAGGCCAAGCTGACCCTGCGGCC...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 90 bp CTCGGGAGGGTGCCGCAGGGTCATGGAGACTGTCATGGCGCCTCCTaGCTGTGTCCCCTGGAGGCAGCAGCAGATCTGCCGACCGCCCAG +
Preference number: 5 (lower is better)
Translates to: LGRVPQGHGDCHGAS*LCPLEAAADLPTAQ
Trigger: CTGGGCGGTCGGCAGATCTGCTGCTGCCTCCAGGGGACACAGGCAGGAGGCGCCATGACAGTCTCCATGACCCTGCGGCACCCTCCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 90 bp TCTGGATGGCTCTGGCCAGCGGTACAGAGCAGCTGGAAAGGGTCCTaGCCCACCTCGCACACCGGGGAGGAGCCGTGGAGGAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SGWLWPAVQSSWKGS*PTSHTGEEPWRRPE
Trigger: CTCAGGCCTCCTCCACGGCTCCTCCCCGGTGTGCGAGGTGGGGCAGGACCCTTTCCAGCTGCTCTGTACCGCTGGCCAGAGCCATCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CCA 90 bp TCCTGGATCCTGAAGCGCTCCGCTCGGGAGGGTGCCGCAGGGTCATaGAGACTGTCATGGCGCCTCCTGCCTGTGTCCCCTGGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SWILKRSAREGAAGS*RLSWRLLPVSPGGS
Trigger: GCTGCCTCCAGGGGACACAGGCAGGAGGCGCCATGACAGTCTCCATGACCCTGCGGCACCCTCCCGAGCGGAGCGCTTCAGGATCCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCCAGAGCCTTCACCTaGGGTAGGGAGCGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRPRAFT*GRERAA
Trigger: GGCGGCACGCTCCCTACCCAAGGTGAAGGCTCTGGG...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS GCA 90 bp CTCACGGTGCTCCTCCTGGATCCTGAAGCGCTCCGCTCGGGAGGGTaGCGCAGGGTCATGGAGACTGTCATGGCGCCTCCTGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: LTVLLLDPEALRSGG*RRVMETVMAPPACV
Trigger: GACACAGGCAGGAGGCGCCATGACAGTCTCCATGACCCTGCGGCACCCTCCCGAGCGGAGCGCTTCAGGATCCAGGAGGAGCACCGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGGCCGCAGGGTCAGCTaGGCCTCACGGTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATGRRVS*ASRCSS
Trigger: GGAGGAGCACCGTGAGGCCAAGCTGACCCTGCGGCC...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCCCAGAGCCTTCACCTaGGGTAGGGAGCGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: PSASGLECFSTAKAGLVLPRAFT*GRERAA
Trigger: GGCGGCACGCTCCCTACCCAAGGTGAAGGCTCTGGG...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGACAGAGGCCCACTaGGATGTGGCCTGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAPTEAH*DVAWPL
Trigger: AAGGGGCCAGGCCACATCCAAGTGGGCCTCTGTCGG...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGCCCTCAGTGCAGGTGGGGCCTaGGCATCAGCAGCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: PSGAVSTDPRAWRISWALSAGGA*ASAAGR
Trigger: CCTTCCAGCTGCTGATGCCAAGGCCCCACCTGCACT...GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS CCA 90 bp CTGTCTCCTGCAGAACAGATGATGGTCAGGGACCCGGCGGCCTTCTaGATGCACGCTGCCGCAGCGCTCCAAGATGCCGAGTCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: LSPAEQMMVRDPAAF*MHAAAALQDAESGG
Trigger: TCCCCCAGACTCGGCATCTTGGAGCGCTGCGGCAGCGTGCATCCAGAAGGCCGCCGGGTCCCTGACCATCATCTGTTCTGCAGGAGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS-3UTR CAA 90 bp AGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTGGCATCGGGCGGTGGCTTaGCTGGAGGTGGTGGACGTT +
Preference number: 5 (lower is better)
Translates to: RWSGACWTALSICDPPPWHRAVA*LEVVDV
Trigger: AACGTCCACCACCTCCAGCAAAGCCACCGCCCGATG...CCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGTGGACCTTCAGGACATaGACGAGCTCTAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGWTFRT*TSSSSQ
Trigger: CTGGGAGCTAGAGCTCGTCAATGTCCTGAAGGTCCA...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTGTCCCTCGCAGATCTTaGATCAGCATGGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: RRQYGAGQPRAVLRSLTGVPRRS*ISMEPR
Trigger: TCTGGGCTCCATGCTGATCAAAGATCTGCGAGGGAC...ACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCATTTGAGTCAGCCACGTaGGTCAGCGCATCGTTCCTC +
Preference number: 5 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPFESAT*VSASFL
Trigger: GAGGAACGATGCGCTGACCAACGTGGCTGACTCAAA...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp CAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGGGGGTCTCGAATTTGTaGTTGCGCATGGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: QYGAGQPRAVLRSLTGKRGVSNL*LRMVGS
Trigger: GGACCCCACCATGCGCAACAACAAATTCGAGACCCC...CCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCACATCGGGCGGTGGCTTaGCTGGAGGTGGTGGACGTT +
Preference number: 5 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAHRAVA*LEVVDV
Trigger: AACGTCCACCACCTCCAGCAAAGCCACCGCCCGATG...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGAGGGTGCGAGCGGCTGTaGGTGGTGGGCAGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRGCERL*VVGRPV
Trigger: CACAGGCCTGCCCACCACCAACAGCCGCTCGCACCC...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACCTTGGCACAGGCGTCTaGCGTGGATTCTGTCCCTCG +
Preference number: 5 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDLGTGV*RGFCPS
Trigger: CGAGGGACAGAATCCACGCAAGACGCCTGTGCCAAG...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS TCA 90 bp CTCCGGTCTCCTTCCTCAGCACCACCAGGGTGCGGAGATGCTGTGTaGGTCAAAGTTTCAGGGTGCGAGCGGCTGTTGGTGGTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LRSPSSAPPGCGDAV*VKVSGCERLLVVGR
Trigger: CCTGCCCACCACCAACAGCCGCTCGCACCCTGAAACTTTGACTCACACAGCATCTCCGCACCCTGGTGGTGCTGAGGAAGGAGACCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 90 bp TCATTCTTGCTTGTAATCCCCCAGCCGGGCAGCTGTGGTCCTGCCTaGTGCCGGTGGATGTGCGCGCTGACAGAGCCGCAGCAGAATGCT +
Preference number: 5 (lower is better)
Translates to: SFLLVIPQPGSCGPA*CRWMCALTEPQQNA
Trigger: AGCATTCTGCTGCGGCTCTGTCAGCGCGCACATCCACCGGCAGCAGGCAGGACCACAGCTGCCCGGCTGGGGGATTACAAGCAAGAATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS GCA 90 bp AGAACAGATGATGGTCAGGGACCCGGCGGCCTTCTGGATGCACGCTaGCGCAGCGCTCCAAGATGCCGAGTCTGGGGGATACTTGAGCTC +
Preference number: 5 (lower is better)
Translates to: RTDDGQGPGGLLDAR*RSAPRCRVWGILEL
Trigger: GAGCTCAAGTATCCCCCAGACTCGGCATCTTGGAGCGCTGCGGCAGCGTGCATCCAGAAGGCCGCCGGGTCCCTGACCATCATCTGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS-3UTR CAA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGCCCTCTTGCAGCTCAGGAGGTaGGGGTGTGCATTAAGGAGC +
Preference number: 5 (lower is better)
Translates to: PSGAVSTDPRAWRISWALLQLRR*GCALRS
Trigger: GCTCCTTAATGCACACCCCAACCTCCTGAGCTGCAA...GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp AGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGACCTGGACCACGGCTTaGTGGCCATTCCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SSTIPASELLRWDGLSFRTWTTA*WPFLAA
Trigger: GGCAGCAAGGAATGGCCACAAAGCCGTGGTCCAGGT...CCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCGAGGCGATGATGCGCTaGCGATGGCCGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGEAMMR*RWPSSW
Trigger: CCAGCTGCTCGGCCATCGCAAGCGCATCATCGCCTC...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCTTGGCACAGGCGTCTaGCGTGGATTCTGTCCCTCG +
Preference number: 5 (lower is better)
Translates to: PSASGLECFSTAKAGLVLLGTGV*RGFCPS
Trigger: CGAGGGACAGAATCCACGCAAGACGCCTGTGCCAAG...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp GTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGGTTCCTGGTCAACTCTaGGAAGAAAGCCGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: VLLHSQGRARSAGRGGGRVPGQL*EESRGR
Trigger: TCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAAC...CCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCCAAGGCTGCCAGGCCTaGAGACTCCATGGCGAAGAT +
Preference number: 5 (lower is better)
Translates to: QPWGAISAVGILLETALPQGCQA*RLHGED
Trigger: ATCTTCGCCATGGAGTCTCAAGGCCTGGCAGCCTTG...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp AGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTGGTTTGAGTCAGCCACGTaGGTCAGCGCATCGTTCCTC +
Preference number: 5 (lower is better)
Translates to: RWSGACWTALSICDPPPWFESAT*VSASFL
Trigger: GAGGAACGATGCGCTGACCAACGTGGCTGACTCAAA...CCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGGGTCTCGAATTTGTaGTTGCGCATGGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAGVSNL*LRMVGS
Trigger: GGACCCCACCATGCGCAACAACAAATTCGAGACCCC...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTGTGTGCTTCTTAGTGTaGCAGCTCAGGAGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAVCFLV*QLRRLG
Trigger: CCCCAACCTCCTGAGCTGCAACACTAAGAAGCACAC...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GGTAGGTGCGAGAGCTGCAAGTGTACAGCGTCTACGCTGCCGCCCGCCCAAGAGGTGTGCTTCTTAGTGTaGCAGCTCAGGAGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GRCESCKCTASTLPPAQEVCFLV*QLRRLG
Trigger: CCCCAACCTCCTGAGCTGCAACACTAAGAAGCACAC...CTCTTGGGCGGGCGGCAGCGTAGACGCTGTACACTTGCAGCTCTCGCACCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGACCTGGACCACGGCTTaGTGGCCATTCCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLTWTTA*WPFLAA
Trigger: GGCAGCAAGGAATGGCCACAAAGCCGTGGTCCAGGT...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CACCGTACTCAATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCTGCAGCCAGCAGGATTaGCACCACATCGGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: HRTQFCLSLLRSPHPQATCSQQD*HHIGLA
Trigger: GGCAAGACCGATGTGGTGCAAATCCTGCTGGCTGCA...GGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAATTGAGTACGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGAGGAGTCAGGAGGTTTCTCTGGCTGGTGTaGCCAACTCTGCACTGGGGC +
Preference number: 5 (lower is better)
Translates to: QLLSCCDGTASPFGGVRRFLWLV*PTLHWG
Trigger: GCCCCAGTGCAGAGTTGGCAACACCAGCCAGAGAAA...CCTCCTGACTCCTCCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTAGATTTCCGCATCTaGGCACAGGCGTCTTGCGTG +
Preference number: 5 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDVDFRI*AQASCV
Trigger: CACGCAAGACGCCTGTGCCAAGATGCGGAAATCTAC...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp CGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTGCAATGACGTTCTTGTaGGAGGCATCGATGAACTTG +
Preference number: 5 (lower is better)
Translates to: RRQYGAGQPRAVLRSLTGAMTFL*EASMNL
Trigger: CAAGTTCATCGATGCCTCCAACAAGAACGTCATTGC...ACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CGAGCATCTCGGGAACTCCCATTAGTGTCTGACGCTGGAGGGCCCAGGAGGGACCGCTTAGAGTCTGGTTaGGGGTCCACAACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: RASRELPLVSDAGGPRRDRLESG*GSTTQE
Trigger: CTCCTGGGTTGTGGACCCCAAACCAGACTCTAAGCG...GTCCCTCCTGGGCCCTCCAGCGTCAGACACTAATGGGAGTTCCCGAGATGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGCTGATATGGTTGGGTTaGAAAAGCAGACGCACCGTA +
Preference number: 5 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGLIWLG*KSRRTV
Trigger: TACGGTGCGTCTGCTTTTCAAACCCAACCATATCAG...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCGGCCTGGCGCATATCTaGGGCCCTCACAGAAAGCAG +
Preference number: 5 (lower is better)
Translates to: ALLMPTSKATHPLKLSSAGLAHI*GPHRKQ
Trigger: CTGCTTTCTGTGAGGGCCCAAGATATGCGCCAGGCC...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GGCTGCCTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTTGCCAGGCCGCCTCCTCGTaGGTTCTACGGAAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GCLWAPLPSCLLPSKLICQAASS*VLRKAF
Trigger: GAAGGCCTTCCGTAGAACCAACGAGGAGGCGGCCTG...GCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGCCCTCGCCATCCAAACTGATTaGCCCACACTGGAGAATGGG +
Preference number: 5 (lower is better)
Translates to: PSGAVSTDPRAWRISWALAIQTD*PTLENG
Trigger: CCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGC...GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp CAACCCTGGGGAGCTATCAGTGCCGTTGGGATCCTGCTGGAGACTGCCCTGCCCTTATCGACTTGGGTTTaGACTGCCCTGGCCGACTGG +
Preference number: 5 (lower is better)
Translates to: QPWGAISAVGILLETALPLSTWV*TALADW
Trigger: CCAGTCGGCCAGGGCAGTCAAAACCCAAGTCGATAA...GGGCAGGGCAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTCCCCAGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS TCA 90 bp CACTCCTGCTGCCTCAGCCTCCTTGTTCGTGGAGTCTTGGTCAGATaGTCGCCCGCTGGCCATGCTGTCCAACGAATGGCAGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: HSCCLSLLVRGVLVR*SPAGHAVQRMAGDG
Trigger: GCCATCTCCTGCCATTCGTTGGACAGCATGGCCAGCGGGCGATCATCTGACCAAGACTCCACGAACAAGGAGGCTGAGGCAGCAGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS-3UTR CAA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACAAAGGGGTCTCGAATTaGTTGTTGCGCATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDKGVSN*LLRMVG
Trigger: CCCCACCATGCGCAACAACAAATTCGAGACCCCTTT...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp GCCGCCTCCTCGTTGGTTCTACGGAAGGCCTTCCTCCTCAGTGAGCTAGACTCCTGCAGCCAGCAGGATTaGCACCACATCGGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: AASSLVLRKAFLLSELDSCSQQD*HHIGLA
Trigger: GGCAAGACCGATGTGGTGCAAATCCTGCTGGCTGCA...GGAGTCTAGCTCACTGAGGAGGAAGGCCTTCCGTAGAACCAACGAGGAGGCGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGGCTGCCTCAGCCTCCTaGTTCGTGGAGTCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLAASAS*FVESWS
Trigger: TGACCAAGACTCCACGAACAAGGAGGCTGAGGCAGC...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GCTTTCCTAGTGGACTCTGCTATGTGTGCACGGCTGCCTATGGGCGCCGCTTCCGCTGCCTCAGCCTCCTaGTTCGTGGAGTCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: AFLVDSAMCARLPMGAASAASAS*FVESWS
Trigger: TGACCAAGACTCCACGAACAAGGAGGCTGAGGCAGC...GGAAGCGGCGCCCATAGGCAGCCGTGCACACATAGCAGAGTCCACTAGGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGGGGTGCGAGCGGCTGTaGGTGGTGGGCAGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: AFAGWERGVLLKPGLFILGCERL*VVGRPV
Trigger: CACAGGCCTGCCCACCACCAACAGCCGCTCGCACCC...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCAGTTCAGCTTTGGGTTaGCTAGTGGGAGGCGCTCGG +
Preference number: 5 (lower is better)
Translates to: ALLMPTSKATHPLKLSSASSALG*LVGGAR
Trigger: CCGAGCGCCTCCCACTAGCAAACCCAAAGCTGAACT...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp CCAAGTGGGGCAGTCAGCACGGACCCAAGGGCCTGGCGCATATCTTGGGCCCTCATAGTGGTCTCATACTaGGTGCTGAGGCTCCGCTTA +
Preference number: 5 (lower is better)
Translates to: PSGAVSTDPRAWRISWALIVVSY*VLRLRL
Trigger: TAAGCGGAGCCTCAGCACCAAGTATGAGACCACTAT...GAGGGCCCAAGATATGCGCCAGGCCCTTGGGTCCGTGCTGACTGCCCCACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCGAGCTATCAGTGCCGTaGGGATCCTGCTGGAGACTG +
Preference number: 5 (lower is better)
Translates to: ALLMPTSKATHPLKLSSAELSVP*GSCWRL
Trigger: CAGTCTCCAGCAGGATCCCAACGGCACTGATAGCTC...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp AAGCTGTCCTCAGCCCAAGGGGGAGAATTCACAGTGTTCGGTGGTGGTAGGTGCATGCCACCCACCTCCTaGGAGGGGAAGGCCCATCAG +
Preference number: 5 (lower is better)
Translates to: KLSSAQGGEFTVFGGGRCMPPTS*EGKAHQ
Trigger: CTGATGGGCCTTCCCCTCCAAGGAGGTGGGTGGCAT...GCACCTACCACCACCGAACACTGTGAATTCTCCCCCTTGGGCTGAGGACAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp AGAGTGCTGGGGACTCTGGCACTGGGTGGTCACAGTGGTTGGTTGGTTCAGGAGGACAATGGAGGCCACTaGGTCCAGGTCCCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: RVLGTLALGGHSGWLVQEDNGGH*VQVPVL
Trigger: GAGGACAGGGACCTGGACCAAGTGGCCTCCATTGTC...CTCCTGAACCAACCAACCACTGTGACCACCCAGTGCCAGAGTCCCCAGCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCCTCAGTGGCTCAGCTaGGCAGAAGCAAACAATGGG +
Preference number: 5 (lower is better)
Translates to: PSASGLECFSTAKAGLVLPQWLS*AEANNG
Trigger: CCCATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGG...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS CCA 90 bp GCAGGTTTCACTCCTGCTGCCTCAGCCTCCTTGTTCGTGGAGTCTTaGTCAGATGATCGCCCGCTGGCCATGCTGTCCAACGAATGGCAG +
Preference number: 5 (lower is better)
Translates to: AGFTPAASASLFVES*SDDRPLAMLSNEWQ
Trigger: CTGCCATTCGTTGGACAGCATGGCCAGCGGGCGATCATCTGACCAAGACTCCACGAACAAGGAGGCTGAGGCAGCAGGAGTGAAACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 90 bp TGGTTCCTCAGTGGCTCAGTTGGTGCTGAGGCTCCGCTTAGAGTCTaGTTTGGGGTCCACAACCCAGGAGACACTGGCATGGGATTGGGC +
Preference number: 5 (lower is better)
Translates to: WFLSGSVGAEAPLRV*FGVHNPGDTGMGLG
Trigger: GCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAACCAGACTCTAAGCGGAGCCTCAGCACCAACTGAGCCACTGAGGAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATAGCTGCATGCTGGCCTaGTGGCAGGCGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNSCMLA*WQAPCW
Trigger: CCAGCAGGGCGCCTGCCACAAGGCCAGCATGCAGCT...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTAAGCTGCGGCTGAGTTaGAGTTCAGCTTTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAKLRLS*SSALGL
Trigger: CAAACCCAAAGCTGAACTCAAACTCAGCCGCAGCTT...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TTCTGTGAGGGAAGAAGGTGCGCCGTGTGTGCAGGGCACAGGCCGCCTCCTCGTAAGCTGCGGCTGAGTTaGAGTTCAGCTTTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: FCEGRRCAVCAGHRPPPRKLRLS*SSALGL
Trigger: CAAACCCAAAGCTGAACTCAAACTCAGCCGCAGCTT...ACGAGGAGGCGGCCTGTGCCCTGCACACACGGCGCACCTTCTTCCCTCACAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTTTCCCAATGCTGCAGTaGGATAAGGACTCACTCCGA +
Preference number: 5 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSAFPMLQ*DKDSLR
Trigger: TCGGAGTGAGTCCTTATCCAACTGCAGCATTGGGAA...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GGCGCCGGCCAGCCCAGGGCAGTGCTCCGATCACTGACAGGTAAGAGGCCAGGGCCGGTTTGGAAGATTTaGTTTCAATCATCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: GAGQPRAVLRSLTGKRPGPVWKI*FQSSQL
Trigger: CAGCTGAGATGATTGAAACAAAATCTTCCAAACCGG...CCCTGGCCTCTTACCTGTCAGTGATCGGAGCACTGCCCTGGGCTGGCCGGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAATGGACCGGAAACCTTaGAGTTGCTCAGGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAMDRKP*SCSGAS
Trigger: AGAGGCACCTGAGCAACTCAAAGGTTTCCGGTCCAT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTACAGCTGAGCCAACTTaGCCTCTCAAATCCACAGCA +
Preference number: 5 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSATAEPT*PLKSTA
Trigger: TGCTGTGGATTTGAGAGGCAAAGTTGGCTCAGCTGT...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACTGGTGTGACCTGCACTaGGAGAAGTGCAAAAGTAGG +
Preference number: 5 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDWCDLH*EKCKSR
Trigger: CCTACTTTTGCACTTCTCCAAGTGCAGGTCACACCA...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACTCAGGTGGTTCCAGCTaGACTCCAGGACTAACAGAT +
Preference number: 5 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDSGGSS*TPGLTD
Trigger: ATCTGTTAGTCCTGGAGTCAAGCTGGAACCACCTGA...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS GCA 90 bp GCCCGTACAGTGCTGCCAGGTCCAAAGGGGTCTCGAATTTGTTGTTaGGCATGGTGGGGTCCGTCAGCTCCTCTAAGAGCACCTTCACCA +
Preference number: 5 (lower is better)
Translates to: ARTVLPGPKGSRICC*AWWGPSAPLRAPSP
Trigger: TGGTGAAGGTGCTCTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACTGTACGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 90 bp GTGGGGTCCGTCAGCTCCTCTAAGAGCACCTTCACCACCTCTGTGTaGCCATACTGCGCTGCACAATGCAGGGCTGTCTCGTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: VGSVSSSKSTFTTSV*PYCAAQCRAVSLSL
Trigger: CAATGACAACGAGACAGCCCTGCATTGTGCAGCGCAGTATGGCCACACAGAGGTGGTGAAGGTGCTCTTAGAGGAGCTGACGGACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 90 bp TTGCTGTCCATGCCAGCATCGAGGAGGACCTGGACCACGGCTTTGTaGCCATTCCTTGCTGCCAAGTGCAGAGGGGTGTGCTTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: LLSMPASRRTWTTAL*PFLAAKCRGVCFLV
Trigger: CACTAAGAAGCACACCCCTCTGCACTTGGCAGCAAGGAATGGCCACAAAGCCGTGGTCCAGGTCCTCCTCGATGCTGGCATGGACAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 90 bp TTGGGGTCCACAACCCAGGAGACACTGGCATGGGATTGGGCATCTTaGTCCATATCAGGTGGTTCCAGTGCGGATTTCCTCACGCCGACC +
Preference number: 5 (lower is better)
Translates to: LGSTTQETLAWDWAS*SISGGSSADFLTPT
Trigger: GGTCGGCGTGAGGAAATCCGCACTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS CCA 90 bp CAAGATGCCGAGTCTGGGGGATACTTGAGCTCCCCTGCCCTTGAATaGGGAAGTCTGCTCCAGGAGCCTACGTGGCAGGTTCTTCTATGC +
Preference number: 5 (lower is better)
Translates to: QDAESGGYLSSPALE*GSLLQEPTWQVLLC
Trigger: GCATAGAAGAACCTGCCACGTAGGCTCCTGGAGCAGACTTCCCCATTCAAGGGCAGGGGAGCTCAAGTATCCCCCAGACTCGGCATCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS-3UTR CAA 90 bp GGCTGCCTATGGGCGCCGCTTCCTTCCTGTCTCCTGCCATCCAAACTGATTTGCTGGACCTTCAGGACATaGACGAGCTCTAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: GCLWAPLPSCLLPSKLICWTFRT*TSSSSQ
Trigger: CTGGGAGCTAGAGCTCGTCAATGTCCTGAAGGTCCA...GCAAATCAGTTTGGATGGCAGGAGACAGGAAGGAAGCGGCGCCCATAGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp ATTTGGCCACTGAACCTTCCCATCGGGAACCCCAGAAATGGACCGGAAACCTTTGAGGCGATGATGCGCTaGCGATGGCCGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: IWPLNLPIGNPRNGPETFEAMMR*RWPSSW
Trigger: CCAGCTGCTCGGCCATCGCAAGCGCATCATCGCCTC...AAAGGTTTCCGGTCCATTTCTGGGGTTCCCGATGGGAAGGTTCAGTGGCCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GCCCCAAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTTTCTCTGGCTGGTGTaGCCAACTCTGCACTGGGGC +
Preference number: 5 (lower is better)
Translates to: APKATRGSIDALSPYLAFFLWLV*PTLHWG
Trigger: GCCCCAGTGCAGAGTTGGCAACACCAGCCAGAGAAA...AAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTTGGGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp AGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAGGCCCAGGCCAAGTGGCCAATGAACTTGACACCTTaGTATGTGATGGACAGGATG +
Preference number: 5 (lower is better)
Translates to: RQGSFCRTWWWQAQAKWPMNLTP*YVMDRM
Trigger: CATCCTGTCCATCACATACAAAGGTGTCAAGTTCAT...TGGCCACTTGGCCTGGGCCTGCCACCACCACGTCCTGCAGAACGAGCCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp CTATTCTCTGACACAACGCAGGCAGTACGGCGCCGGCCAGCCCAGGGCAGTGCTTCTGCAATGACGTTCTaGTTGGAGGCATCGATGAAC +
Preference number: 5 (lower is better)
Translates to: LFSDTTQAVRRRPAQGSASAMTF*LEASMN
Trigger: GTTCATCGATGCCTCCAACAAGAACGTCATTGCAGA...AGCACTGCCCTGGGCTGGCCGGCGCCGTACTGCCTGCGTTGTGTCAGAGAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGATGGGATTGGGCATCTaGGTCCATATCAGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: PSASGLECFSTAKAGLVLMGLGI*VHIRWF
Trigger: GAACCACCTGATATGGACCAAGATGCCCAATCCCAT...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGGACACTGGCATGGGATaGGGCATCTTGGTCCATATC +
Preference number: 5 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLDTGMG*GILVHI
Trigger: GATATGGACCAAGATGCCCAATCCCATGCCAGTGTC...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCGACACTGGCATGGGATaGGGCATCTTGGTCCATATC +
Preference number: 5 (lower is better)
Translates to: ALLMPTSKATHPLKLSSADTGMG*GILVHI
Trigger: GATATGGACCAAGATGCCCAATCCCATGCCAGTGTC...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCACAGCAGCTGATATGGTaGGGTTTGAAAAGCAGACGC +
Preference number: 5 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVAQQLIW*GLKSRR
Trigger: GCGTCTGCTTTTCAAACCCAACCATATCAGCTGCTG...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CAAAGACTCAGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCACCCAGTTTATCGACTaGGGTTTTGACTGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: QRLSSTIPASELLRWDGLTQFID*GFDCPG
Trigger: GCCAGGGCAGTCAAAACCCAAGTCGATAAACTGGGT...GAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCTGAGTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS TCA 90 bp GTGGCAGGTTCTTCTATGCCCATGAAGTCAAGTGTCCCCGGGTGCTaGTTCATTCTTGCTTGTAATCCCCCAGCCGGGCAGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: VAGSSMPMKSSVPGC*FILACNPPAGQLWS
Trigger: GGACCACAGCTGCCCGGCTGGGGGATTACAAGCAAGAATGAATCAGCACCCGGGGACACTTGACTTCATGGGCATAGAAGAACCTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS CCA 90 bp GTGCTGCCAGGTCCAAAGGGGTCTCGAATTTGTTGTTGCGCATGGTaGGGTCCGTCAGCTCCTCTAAGAGCACCTTCACCACCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: VLPGPKGSRICCCAW*GPSAPLRAPSPPLC
Trigger: ACACAGAGGTGGTGAAGGTGCTCTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 90 bp ACAGTGCTGCCAGGTCCAAAGGGGTCTCGAATTTGTTGTTGCGCATaGTGGGGTCCGTCAGCTCCTCTAAGAGCACCTTCACCACCTCTG +
Preference number: 5 (lower is better)
Translates to: TVLPGPKGSRICCCA*WGPSAPLRAPSPPL
Trigger: CAGAGGTGGTGAAGGTGCTCTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 90 bp AAGATTTTGTTTCAATCATCTCAGCTGCAGAGGCGCCCGTCGCCCTaGACTTCTGGGCCTGCAGGGCCAACTGATAGGCCACTTCGAAGG +
Preference number: 5 (lower is better)
Translates to: KILFQSSQLQRRPSP*TSGPAGPTDRPLRR
Trigger: CCTTCGAAGTGGCCTATCAGTTGGCCCTGCAGGCCCAGAAGTCCAGGGCGACGGGCGCCTCTGCAGCTGAGATGATTGAAACAAAATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGAGAGGGTAGCAGCCTTTaGAGTCAGCCACGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYREGSSL*SQPRWS
Trigger: TGACCAACGTGGCTGACTCAAAAGGCTGCTACCCTC...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp TTGAGACTCCATGGCGAAGATAGAGGGGCTGTCCACACACATGCCACCCACCTCGTCTCGAATTTGTTGTaGCGCATGGTGGGGTCCGTC +
Preference number: 5 (lower is better)
Translates to: LRLHGEDRGAVHTHATHLVSNLL*RMVGSV
Trigger: GACGGACCCCACCATGCGCAACAACAAATTCGAGAC...GAGGTGGGTGGCATGTGTGTGGACAGCCCCTCTATCTTCGCCATGGAGTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGTCCGCCTGTGGTCTTTaGTTTTTCCATCCACCAACA +
Preference number: 5 (lower is better)
Translates to: PSASGLECFSTAKAGLVLSACGL*FFHPPT
Trigger: TGTTGGTGGATGGAAAAACAAAAGACCACAGGCGGA...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp AGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTGGGAGGCATCGATGAACTaGACACCTTTGTATGTGATG +
Preference number: 5 (lower is better)
Translates to: RWSGACWTALSICDPPPWEASMN*TPLYVM
Trigger: CATCACATACAAAGGTGTCAAGTTCATCGATGCCTC...CCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp AGGTGGTCAGGGGCATGCTGGACGGCGCTGTCTATCTGTGATCCCCCACCGTGGGGCTTAGGCACCGGTTaGGAAGATTTTGTTTCAATC +
Preference number: 5 (lower is better)
Translates to: RWSGACWTALSICDPPPWGLGTG*EDFVSI
Trigger: GATTGAAACAAAATCTTCCAAACCGGTGCCTAAGCC...CCACGGTGGGGGATCACAGATAGACAGCGCCGTCCAGCATGCCCCTGACCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GGCTCCTTCACAGTTCAGAAACGCAGCGACAGGGTCTGCCCCTGGTGTGACCTGTCAAATTCACAGCCTTaGCTGGCTGGGAAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: GSFTVQKRSDRVCPWCDLSNSQP*LAGKEE
Trigger: CTCCTCTTTCCCAGCCAGCAAAGGCTGTGAATTTGA...CAGGTCACACCAGGGGCAGACCCTGTCGCTGCGTTTCTGAACTGTGAAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACTTACAGTTCAGTCCATaGCCACACCATGAGCAACAA +
Preference number: 5 (lower is better)
Translates to: ASGLECFSTAKAGLVLQDLQFSP*PHHEQQ
Trigger: TTGTTGCTCATGGTGTGGCAATGGACTGAACTGTAA...GTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATCCCTCCATGCCTGCTTaGAGCACCCACAGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNPSMPA*STHSLQ
Trigger: CTGCAGGCTGTGGGTGCTCAAAGCAGGCATGGAGGG...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS TCA 90 bp GGCATCTCCTTTCCAGGCTGCCAAATGCAGAGGGTAGCAGCCTTTTaGGTCAGCCACGTTGGTCAGCGCATCGTTCCTCAGAAGAACCTC +
Preference number: 5 (lower is better)
Translates to: GISFPGCQMQRVAAF*VSHVGQRIVPQKNL
Trigger: GAGGTTCTTCTGAGGAACGATGCGCTGACCAACGTGGCTGACTCAAAAGGCTGCTACCCTCTGCATTTGGCAGCCTGGAAAGGAGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 90 bp TGGACATCGTCAAAGCCATTCAGAAGCAACTTGCTCTCATACTGCTaGAGCCCAATCGACTCCAGCCACTCCCCGACACTCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: WTSSKPFRSNLLSYC*SPIDSSHSPTLCSS
Trigger: GCTGGAGCAGAGTGTCGGGGAGTGGCTGGAGTCGATTGGGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATGGCTTTGACGATGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS CCA 90 bp CCTCAGCCTCCTTGTTCGTGGAGTCTTGGTCAGATGATCGCCCGCTaGCCATGCTGTCCAACGAATGGCAGGAGATGGCATTATACAGAG +
Preference number: 5 (lower is better)
Translates to: PQPPCSWSLGQMIAR*PCCPTNGRRWHYTE
Trigger: CTCTGTATAATGCCATCTCCTGCCATTCGTTGGACAGCATGGCCAGCGGGCGATCATCTGACCAAGACTCCACGAACAAGGAGGCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 90 bp CTTATCTATGTGGTCTTCTTCCTCTTCATCGGGCGGTGGCTTTGCTaGAGGTGGTGGACGTTCCCTAGGCCTCACTCCAGCAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: LIYVVFFLFIGRWLC*RWWTFPRPHSSRFH
Trigger: GTGAAACCTGCTGGAGTGAGGCCTAGGGAACGTCCACCACCTCCAGCAAAGCCACCGCCCGATGAAGAGGAAGAAGACCACATAGATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 90 bp GAGTCTGGTTTGGGGTCCACAACCCAGGAGACACTGGCATGGGATTaGGCATCTTGGTCCATATCAGGTGGTTCCAGTGCGGATTTCCTC +
Preference number: 5 (lower is better)
Translates to: ESGLGSTTQETLAWD*ASWSISGGSSADFL
Trigger: GAGGAAATCCGCACTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAACCAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS CCA 90 bp CGCTTAGAGTCTGGTTTGGGGTCCACAACCCAGGAGACACTGGCATaGGATTGGGCATCTTGGTCCATATCAGGTGGTTCCAGTGCGGAT +
Preference number: 5 (lower is better)
Translates to: RLESGLGSTTQETLA*DWASWSISGGSSAD
Trigger: ATCCGCACTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAACCAGACTCTAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS CCA 90 bp GAGTCTGGTTTGGGGTCCACAACCCAGGAGACACTGGCATGGGATTaGGCATCTTGGTCCATATCAGGTGGTTCCAGCTTGACTCCAGGA +
Preference number: 5 (lower is better)
Translates to: ESGLGSTTQETLAWD*ASWSISGGSSLTPG
Trigger: TCCTGGAGTCAAGCTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAACCAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS CCA 90 bp GAAGATAGTGGTCTCATACTTGGTGCTGAGGCTCCGCTTAGAGTCTaGTTTGGGGTCCACAACCCAGGAGACACTGGCATGGGATTGGGC +
Preference number: 5 (lower is better)
Translates to: EDSGLILGAEAPLRV*FGVHNPGDTGMGLG
Trigger: GCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAACCAGACTCTAAGCGGAGCCTCAGCACCAAGTATGAGACCACTATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp CCATCTGCTAGCGGCCTGGAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGTGGTTATCTTTTATGTaGACGTCAGTTCCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: PSASGLECFSTAKAGLVLWLSFM*TSVPAA
Trigger: GGCTGCAGGAACTGACGTCAACATAAAAGATAACCA...CAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTCCAGGCCGCTAGCAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS-3UTR CAA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGTTTGAGTTCAGCTTaGGGTTTGCTAGTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGSLSSA*GLLVGG
Trigger: GCCTCCCACTAGCAAACCCAAAGCTGAACTCAAACT...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGAAGATCAGAGTCAGACTaGGACAAGCTGCGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRRSESD*DKLRLS
Trigger: ACTCAGCCGCAGCTTGTCCAAGTCTGACTCTGATCT...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCTGGAGCTGTAACCACTaGACAAGAAGGAATGGACGT +
Preference number: 5 (lower is better)
Translates to: ALLMPTSKATHPLKLSSAWSCNH*TRRNGR
Trigger: ACGTCCATTCCTTCTTGTCAAGTGGTTACAGCTCCA...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp TCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGACTTCTGGGAGAGCAAATCTaGGCACCTCAGCTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: SGRHKDGWVRRTHPVYRLLGEQI*APQLGE
Trigger: TTCTCCCAGCTGAGGTGCCAAGATTTGCTCTCCCAG...AAGTCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS GCA 90 bp TGCATTAAGGAGCATTTTCACCACCTCCAGTCGCCCGTACAGTGCTaGCAGGTCCAAAGGGGTCTCGAATTTGTTGTTGCGCATGGTGGG +
Preference number: 5 (lower is better)
Translates to: CIKEHFHHLQSPVQC*QVQRGLEFVVAHGG
Trigger: CCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACTGTACGGGCGACTGGAGGTGGTGAAAATGCTCCTTAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 90 bp CCTCCTTGTTCGTGGAGTCTTGGTCAGATGATCGCCCGCTGGCCATaGTGTCCAACGAATGGCAGGAGATGGCATTATACAGAGCTTCGT +
Preference number: 5 (lower is better)
Translates to: PPCSWSLGQMIARWP*CPTNGRRWHYTELR
Trigger: ACGAAGCTCTGTATAATGCCATCTCCTGCCATTCGTTGGACAGCATGGCCAGCGGGCGATCATCTGACCAAGACTCCACGAACAAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 90 bp CTTCTTATCTATGTGGTCTTCTTCCTCTTCATCGGGCGGTGGCTTTaGTGGAGGTGGTGGACGTTCCCTAGGCCTCACTCCAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LLIYVVFFLFIGRWL*WRWWTFPRPHSSRF
Trigger: AAACCTGCTGGAGTGAGGCCTAGGGAACGTCCACCACCTCCAGCAAAGCCACCGCCCGATGAAGAGGAAGAAGACCACATAGATAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 90 bp AAGTGGACATCGTCAAAGCCATTCAGAAGCAACTTGCTCTCATACTaGTGCAGCCCAATCGACTCCAGCCACTCCCCGACACTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KWTSSKPFRSNLLSY*CSPIDSSHSPTLCS
Trigger: GGAGCAGAGTGTCGGGGAGTGGCTGGAGTCGATTGGGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATGGCTTTGACGATGTCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS CCA 90 bp CAGATAATTGGCTTCATAACCACAGGACTCGAAGATGAGTTTCTCTaGCTGGTGTTGCCAACTCTGCACTGGGGCGTAGGGGGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: QIIGFITTGLEDEFL*LVLPTLHWGVGGCQ
Trigger: CTGGCAGCCCCCTACGCCCCAGTGCAGAGTTGGCAACACCAGCCAGAGAAACTCATCTTCGAGTCCTGTGGTTATGAAGCCAATTATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CCA 90 bp CGCTTAGAGTCTGGTTTGGGGTCCACAACCCAGGAGACACTGGCATaGGATTGGGCATCTTGGTCCATATCAGGTGGTTCCAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: RLESGLGSTTQETLA*DWASWSISGGSSLT
Trigger: AGTCAAGCTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAACCAGACTCTAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGAGTTCAGCTTTGGGTTaGCTAGTGGGAGGCGCTCGG +
Preference number: 5 (lower is better)
Translates to: AFAGWERGVLLKPGLFILSSALG*LVGGAR
Trigger: CCGAGCGCCTCCCACTAGCAAACCCAAAGCTGAACT...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TTCCTGGTCAACTCTTGGAAGAAAGCCGGGGCCGAGAACTGTACAGCGGTAGCTAGATCAGAGTCAGACTaGGACAAGCTGCGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: FLVNSWKKAGAENCTAVARSESD*DKLRLS
Trigger: ACTCAGCCGCAGCTTGTCCAAGTCTGACTCTGATCT...AGCTACCGCTGTACAGTTCTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TGCTCAGGAAGGCACAAGGATGGGTGGGTACGCAGGACCCACCCAGTTTATCGATTCCCAATGCTGCAGTaGGATAAGGACTCACTCCGA +
Preference number: 5 (lower is better)
Translates to: CSGRHKDGWVRRTHPVYRFPMLQ*DKDSLR
Trigger: TCGGAGTGAGTCCTTATCCAACTGCAGCATTGGGAA...TCGATAAACTGGGTGGGTCCTGCGTACCCACCCATCCTTGTGCCTTCCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp ACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGCCAGCCTGGAGCTGTAACCACTaGACAAGAAGGAATGGACGT +
Preference number: 5 (lower is better)
Translates to: TKRAAGKLKKQRRTGMPAWSCNH*TRRNGR
Trigger: ACGTCCATTCCTTCTTGTCAAGTGGTTACAGCTCCA...GGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp AGCTCGGAGCCTGCTAAAGTGCCCACAGGAGGAACTGGGCACACAGCTGAGCCAGAGGCATCGATGAACTaGACACCTTTGTATGTGATG +
Preference number: 5 (lower is better)
Translates to: SSEPAKVPTGGTGHTAEPEASMN*TPLYVM
Trigger: CATCACATACAAAGGTGTCAAGTTCATCGATGCCTC...TGGCTCAGCTGTGTGCCCAGTTCCTCCTGTGGGCACTTTAGCAGGCTCCGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CCCCACGTCTATGTTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCGCAATGACGTTCTTGTaGGAGGCATCGATGAACTTG +
Preference number: 5 (lower is better)
Translates to: PHVYVSAAQCGSSVAQLGAMTFL*EASMNL
Trigger: CAAGTTCATCGATGCCTCCAACAAGAACGTCATTGC...GCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GGGGAGGAAAGGGTTAACCAATGGGGCCTGCGGACGGTGGAGGAAATGGAAAGGTCTGCAATGACGTTCTaGTTGGAGGCATCGATGAAC +
Preference number: 5 (lower is better)
Translates to: GEERVNQWGLRTVEEMERSAMTF*LEASMN
Trigger: GTTCATCGATGCCTCCAACAAGAACGTCATTGCAGA...CCTTTCCATTTCCTCCACCGTCCGCAGGCCCCATTGGTTAACCCTTTCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp AGCTCCACCATCCCAGCTTCTGAGCTGCTGCGATGGGACGGCCTCTCCTTTCGGCCGGTTTGGAAGATTTaGTTTCAATCATCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SSTIPASELLRWDGLSFRPVWKI*FQSSQL
Trigger: CAGCTGAGATGATTGAAACAAAATCTTCCAAACCGG...CCGAAAGGAGAGGCCGTCCCATCGCAGCAGCTCAGAAGCTGGGATGGTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp CTCCTGCCATCCAAACTGATTTGCCCACACTGGAGAATGGGGTGCCTCTTCAAACGCTTAGAGTCTGGTTaGGGGTCCACAACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LLPSKLICPHWRMGCLFKRLESG*GSTTQE
Trigger: CTCCTGGGTTGTGGACCCCAAACCAGACTCTAAGCG...TTTGAAGAGGCACCCCATTCTCCAGTGTGGGCAAATCAGTTTGGATGGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS TCA 90 bp GCATGGAGCCCAGATAATTGGCTTCATAACCACAGGACTCGAAGATaGGTTTCTCTGGCTGGTGTTGCCAACTCTGCACTGGGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: AWSPDNWLHNHRTRR*VSLAGVANSALGRR
Trigger: CCTACGCCCCAGTGCAGAGTTGGCAACACCAGCCAGAGAAACTCATCTTCGAGTCCTGTGGTTATGAAGCCAATTATCTGGGCTCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 90 bp GTGTGCATTAAGGAGCATTTTCACCACCTCCAGTCGCCCGTACAGTaGTGCCAGGTCCAAAGGGGTCTCGAATTTGTTGTTGCGCATGGT +
Preference number: 5 (lower is better)
Translates to: VCIKEHFHHLQSPVQ*CQVQRGLEFVVAHG
Trigger: ACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACTGTACGGGCGACTGGAGGTGGTGAAAATGCTCCTTAATGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 90 bp AGGCTGCCAAATGCAGAGGGTAGCAGCCTTTTGAGTCAGCCACGTTaGTCAGCGCATCGTTCCTCAGAAGAACCTCGACCACATCCTTAT +
Preference number: 5 (lower is better)
Translates to: RLPNAEGSSLLSQPR*SAHRSSEEPRPHPY
Trigger: ATAAGGATGTGGTCGAGGTTCTTCTGAGGAACGATGCGCTGACCAACGTGGCTGACTCAAAAGGCTGCTACCCTCTGCATTTGGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 90 bp CAGATGATCGCCCGCTGGCCATGCTGTCCAACGAATGGCAGGAGATaGCATTATACAGAGCTTCGTAGGGACCCTCTTCTTCAGCATTTG +
Preference number: 5 (lower is better)
Translates to: QMIARWPCCPTNGRR*HYTELRRDPLLQHL
Trigger: CAAATGCTGAAGAAGAGGGTCCCTACGAAGCTCTGTATAATGCCATCTCCTGCCATTCGTTGGACAGCATGGCCAGCGGGCGATCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 90 bp TTGGGGTCCACAACCCAGGAGACACTGGCATGGGATTGGGCATCTTaGTCCATATCAGGTGGTTCCAGCTTGACTCCAGGACTAACAGAT +
Preference number: 5 (lower is better)
Translates to: LGSTTQETLAWDWAS*SISGGSSLTPGLTD
Trigger: ATCTGTTAGTCCTGGAGTCAAGCTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp ACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGCCAGCCGCTGTCTCGTTGTCATaGTTCTGTTCATTGACTCTG +
Preference number: 5 (lower is better)
Translates to: TKRAAGKLKKQRRTGMPAAVSLS*FCSLTL
Trigger: CAGAGTCAATGAACAGAACAATGACAACGAGACAGC...GGCTGGCATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp AAGCTGTCCTCAGCCCAAGGGGGAGAATTCACAGTGTTCGGTGGTGGTAGGTGCTCCGCCTGTGGTCTTTaGTTTTTCCATCCACCAACA +
Preference number: 5 (lower is better)
Translates to: KLSSAQGGEFTVFGGGRCSACGL*FFHPPT
Trigger: TGTTGGTGGATGGAAAAACAAAAGACCACAGGCGGA...GCACCTACCACCACCGAACACTGTGAATTCTCCCCCTTGGGCTGAGGACAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACAGCTGCATGCTGGCCTaGTGGCAGGCGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYSCMLA*WQAPCW
Trigger: CCAGCAGGGCGCCTGCCACAAGGCCAGCATGCAGCT...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TTCCTGGTCAACTCTTGGAAGAAAGCCGGGGCCGAGAACTGTACAGCGGTAGCTAGTTTGAGTTCAGCTTaGGGTTTGCTAGTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: FLVNSWKKAGAENCTAVASLSSA*GLLVGG
Trigger: GCCTCCCACTAGCAAACCCAAAGCTGAACTCAAACT...AGCTACCGCTGTACAGTTCTCGGCCCCGGCTTTCTTCCAAGAGTTGACCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TTTCCGCAGCACAGTGTGGTTCCTCAGTGGCTCAGCTTGGCAGAAGCAAACAATGTCCCTCGCAGATCTTaGATCAGCATGGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: FPQHSVVPQWLSLAEANNVPRRS*ISMEPR
Trigger: TCTGGGCTCCATGCTGATCAAAGATCTGCGAGGGAC...ATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCCTGGTAGATTTCCGCATCTaGGCACAGGCGTCTTGCGTG +
Preference number: 5 (lower is better)
Translates to: AFAGWERGVLLKPGLFILVDFRI*AQASCV
Trigger: CACGCAAGACGCCTGTGCCAAGATGCGGAAATCTAC...CAGGATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp ATTCTGCCTGAGCCTGCTCCGTTCCCCTCACCCACAGGCCACCGCCTTCTCTTCGGTCAGTCTATGTTGTaGCACAGATTGGTTATGTTT +
Preference number: 5 (lower is better)
Translates to: ILPEPAPFPSPTGHRLLFGQSML*HRLVMF
Trigger: AAACATAACCAATCTGTGCAACAACATAGACTGACC...GAAGAGAAGGCGGTGGCCTGTGGGTGAGGGGAACGGAGCAGGCTCAGGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp GAGTGCTTCTCCACAGCCAAGGCAGGGCTCGTTCTGCAGGACGTGGTGGTGGCAAATATTTACACTCTCTaGGGTACTGAGGTCAGTCTA +
Preference number: 5 (lower is better)
Translates to: ECFSTAKAGLVLQDVVVANIYTL*GTEVSL
Trigger: TAGACTGACCTCAGTACCCAAGAGAGTGTAAATATT...TGCCACCACCACGTCCTGCAGAACGAGCCCTGCCTTGGCTGTGGAGAAGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp AAGCTGTCCTCAGCCCAAGGGGGAGAATTCACAGTGTTCGGTGGTGGTAGGTGCAGAGCATTCTGTTCATaGACTCTGGTGTGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: KLSSAQGGEFTVFGGGRCRAFCS*TLVCEG
Trigger: GCCTTCACACACCAGAGTCAATGAACAGAATGCTCT...GCACCTACCACCACCGAACACTGTGAATTCTCCCCCTTGGGCTGAGGACAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS-3UTR CAA 90 bp GCCCTCTTGATGCCCACCTCAAAGGCAACTCACCCCCTCAAGCTGTCCTCAGCCAAGGGGCCGTACTTTTaGAGTTCTTTGATCTCAAGA +
Preference number: 5 (lower is better)
Translates to: ALLMPTSKATHPLKLSSAKGPYF*SSLISR
Trigger: TCTTGAGATCAAAGAACTCAAAAAGTACGGCCCCTT...GGCTGAGGACAGCTTGAGGGGGTGAGTTGCCTTTGAGGTGGGCATCAAGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS TCA 90 bp GGAAGTCTGCTCCAGGAGCCTACGTGGCAGGTTCTTCTATGCCCATaGAGTCAAGTGTCCCCGGGTGCTGATTCATTCTTGCTTGTAATC +
Preference number: 5 (lower is better)
Translates to: GSLLQEPTWQVLLCP*SQVSPGADSFLLVI
Trigger: GATTACAAGCAAGAATGAATCAGCACCCGGGGACACTTGACTTCATGGGCATAGAAGAACCTGCCACGTAGGCTCCTGGAGCAGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS GCA 90 bp AAGAGCACCTTCACCACCTCTGTGTGGCCATACTGCGCTGCACAATaGAGGGCTGTCTCGTTGTCATTGTTCTGTTCATTGACTCTGGTG +
Preference number: 5 (lower is better)
Translates to: KSTFTTSVWPYCAAQ*RAVSLSLFCSLTLV
Trigger: CACCAGAGTCAATGAACAGAACAATGACAACGAGACAGCCCTGCATTGTGCAGCGCAGTATGGCCACACAGAGGTGGTGAAGGTGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS CCA 90 bp AAAATACTTCTTATCTATGTGGTCTTCTTCCTCTTCATCGGGCGGTaGCTTTGCTGGAGGTGGTGGACGTTCCCTAGGCCTCACTCCAGC +
Preference number: 5 (lower is better)
Translates to: KILLIYVVFFLFIGR*LCWRWWTFPRPHSS
Trigger: GCTGGAGTGAGGCCTAGGGAACGTCCACCACCTCCAGCAAAGCCACCGCCCGATGAAGAGGAAGAAGACCACATAGATAAGAAGTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 90 bp ACTCCTGACACGGTGAAAGTCATTCTGCCGTTCCCAGGTACTTTCTaGCCCTTGGGGCAGGACAATGCCAACTTCCTTGGTTATCTACAA +
Preference number: 5 (lower is better)
Translates to: TPDTVKVILPFPGTF*PLGQDNANFLGYLQ
Trigger: TTGTAGATAACCAAGGAAGTTGGCATTGTCCTGCCCCAAGGGGCAGAAAGTACCTGGGAACGGCAGAATGACTTTCACCGTGTCAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS-3UTR CAA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTTTGCAGCTCAGGAGGTaGGGGTGTGCATTAAGGAGC +
Preference number: 5 (lower is better)
Translates to: KPLSCSGASKAVFLREACLQLRR*GCALRS
Trigger: GCTCCTTAATGCACACCCCAACCTCCTGAGCTGCAA...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp AAAGGCCACGCGGGGGAGCATCGATGCACTGTCACCTTATTTAGCCTTTTCCACTGGGAAAGAGGAGTGTaGCTGAAGCCTGGATTATTC +
Preference number: 5 (lower is better)
Translates to: KGHAGEHRCTVTLFSLFHWERGV*LKPGLF
Trigger: GAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCA...GTGGAAAAGGCTAAATAAGGTGACAGTGCATCGATGCTCCCCCGCGTGGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TTAAAAACAAAGCGAGCAGCAGGAAAGCTTAAGAAGCAGAGGCGCACCGGGATGATGGGATTGGGCATCTaGGTCCATATCAGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LKTKRAAGKLKKQRRTGMMGLGI*VHIRWF
Trigger: GAACCACCTGATATGGACCAAGATGCCCAATCCCAT...CATCCCGGTGCGCCTCTGCTTCTTAAGCTTTCCTGCTGCTCGCTTTGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACTCCTCAGTGGCTCAGTaGGTGCTGAGGCTCCGCTTA +
Preference number: 5 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYSSVAQ*VLRLRL
Trigger: TAAGCGGAGCCTCAGCACCAACTGAGCCACTGAGGA...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACGAGGGTAGCAGCCTTTaGAGTCAGCCACGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYEGSSL*SQPRWS
Trigger: TGACCAACGTGGCTGACTCAAAAGGCTGCTACCCTC...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACGTCTCGAATTTGTTGTaGCGCATGGTGGGGTCCGTC +
Preference number: 5 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYVSNLL*RMVGSV
Trigger: GACGGACCCCACCATGCGCAACAACAAATTCGAGAC...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp TCTTGGGTACTGAGGTCAGTCTATGTTGTTGCACAGATTGGTTATGTTTGGTACCTGGGAGAGCAAATCTaGGCACCTCAGCTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: SWVLRSVYVVAQIGYVWYLGEQI*APQLGE
Trigger: TTCTCCCAGCTGAGGTGCCAAGATTTGCTCTCCCAG...GTACCAAACATAACCAATCTGTGCAACAACATAGACTGACCTCAGTACCCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp ACAGCCTTTGCTGGCTGGGAAAGAGGAGTGTTGCTGAAGCCTGGATTATTCATCGGCTTAGGCACCGGTTaGGAAGATTTTGTTTCAATC +
Preference number: 5 (lower is better)
Translates to: TAFAGWERGVLLKPGLFIGLGTG*EDFVSI
Trigger: GATTGAAACAAAATCTTCCAAACCGGTGCCTAAGCC...GATGAATAATCCAGGCTTCAGCAACACTCCTCTTTCCCAGCCAGCAAAGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTTCATTGTTCTGTTCATaGACTCTGGTGTGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: KPLSCSGASKAVFLREACSLFCS*TLVCEG
Trigger: GCCTTCACACACCAGAGTCAATGAACAGAACAATGA...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTCACACTTATCTTCATTaGGCCACTGAACCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: KPLSCSGASKAVFLREACHTYLH*ATEPSH
Trigger: ATGGGAAGGTTCAGTGGCCAAATGAAGATAAGTGTG...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAATGCAGGGCTGTCTCGTaGTCATTGTTCTGTTCATTG +
Preference number: 5 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQCRAVS*SLFCSL
Trigger: CAATGAACAGAACAATGACAACGAGACAGCCCTGCA...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp AAACCTTTGAGTTGCTCAGGTGCCTCTAAGGCTGTGTTCTTACGAGAAGCCTGTATGAACTTGACACCTTaGTATGTGATGGACAGGATG +
Preference number: 5 (lower is better)
Translates to: KPLSCSGASKAVFLREACMNLTP*YVMDRM
Trigger: CATCCTGTCCATCACATACAAAGGTGTCAAGTTCAT...ACAGGCTTCTCGTAAGAACACAGCCTTAGAGGCACCTGAGCAACTCAAAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS-3UTR CAA 90 bp CAACCACATGGGTTAAGAATGTGCCTAACAGTACTCCCTGCACATACATACCAAATGTTGTTGCACAGATaGGTTATGTTTGGTACCTCA +
Preference number: 5 (lower is better)
Translates to: QPHGLRMCLTVLPAHTYQMLLHR*VMFGTS
Trigger: TGAGGTACCAAACATAACCAATCTGTGCAACAACAT...TTGGTATGTATGTGCAGGGAGTACTGTTAGGCACATTCTTAACCCATGTGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS GCA 72 bp GAGCCGTGGAGGAGGCCTGAGAACTGCTCTGGGACCTaGCCGTCCTGCCCCTCCGCAGAGTCCTGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: EPWRRPENCSGT*PSCPSAESWLR
Trigger: CCGGAGCCAGGACTCTGCGGAGGGGCAGGACGGGCAGGTCCCAGAGCAGTTCTCAGGCCTCCTCCACGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp CACACCGGGGAGGAGCCGTGGAGGAGGCCTGAGAACTaGTCTGGGACCTGCCCGTCCTGCCCCTCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: HTGEEPWRRPEN*SGTCPSCPSAE
Trigger: CTCTGCGGAGGGGCAGGACGGGCAGGTCCCAGAGCAGTTCTCAGGCCTCCTCCACGGCTCCTCCCCGGTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp GGTAGGGAGCGTGCCGCCTGGAGCAGCTTCCGCCGGTaGTGTGGGTCGCTGATGCCGATGTCCCGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: GRERAAWSSFRR*CGSLMPMSRRS
Trigger: GGACCTGCGGGACATCGGCATCAGCGACCCACAGCACCGGCGGAAGCTGCTCCAGGCGGCACGCTCCCTACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS GCA 72 bp AGGAGGCCTGAGAACTGCTCTGGGACCTGCCCGTCCTaGCCCTCCGCAGAGTCCTGGCTCCGGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: RRPENCSGTCPS*PSAESWLRLLL
Trigger: CAGCAGCAGCCGGAGCCAGGACTCTGCGGAGGGGCAGGACGGGCAGGTCCCAGAGCAGTTCTCAGGCCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp CTTGTAATCCCCCAGCCGGGCAGCTGTGGTCCTGCCTaGTGCCGGTGGATGTGCGCGCTGACAGAGCCGCAG +
Preference number: 6 (lower is better)
Translates to: LVIPQPGSCGPA*CRWMCALTEPQ
Trigger: CTGCGGCTCTGTCAGCGCGCACATCCACCGGCAGCAGGCAGGACCACAGCTGCCCGGCTGGGGGATTACAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS CCA 72 bp CCGTCTGGATGGCTCTGGCCAGCGGTACAGAGCAGCTaGAAAGGGTCCTGCCCCACCTCGCACACCGGGGAG +
Preference number: 6 (lower is better)
Translates to: PSGWLWPAVQSS*KGSCPTSHTGE
Trigger: CTCCCCGGTGTGCGAGGTGGGGCAGGACCCTTTCCAGCTGCTCTGTACCGCTGGCCAGAGCCATCCAGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CCA 72 bp CCCAGAGCCTTCACCTTGGGTAGGGAGCGTGCCGCCTaGAGCAGCTTCCGCCGGTGCTGTGGGTCGCTGATG +
Preference number: 6 (lower is better)
Translates to: PRAFTLGRERAA*SSFRRCCGSLM
Trigger: CATCAGCGACCCACAGCACCGGCGGAAGCTGCTCCAGGCGGCACGCTCCCTACCCAAGGTGAAGGCTCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS GCA 72 bp GTGCCGCAGGGTCATGGAGACTGTCATGGCGCCTCCTaGCTGTGTCCCCTGGAGGCAGCAGCAGATCTGCCG +
Preference number: 6 (lower is better)
Translates to: VPQGHGDCHGAS*LCPLEAAADLP
Trigger: CGGCAGATCTGCTGCTGCCTCCAGGGGACACAGGCAGGAGGCGCCATGACAGTCTCCATGACCCTGCGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp CTCCTCCTGGATCCTGAAGCGCTCCGCTCGGGAGGGTaGCGCAGGGTCATGGAGACTGTCATGGCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: LLLDPEALRSGG*RRVMETVMAPP
Trigger: AGGAGGCGCCATGACAGTCTCCATGACCCTGCGGCACCCTCCCGAGCGGAGCGCTTCAGGATCCAGGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp CTTGCTTGTAATCCCCCAGCCGGGCAGCTGTGGTCCTaGCTGCTGCCGGTGGATGTGCGCGCTGACAGAGCC +
Preference number: 6 (lower is better)
Translates to: LACNPPAGQLWS*LLPVDVRADRA
Trigger: GGCTCTGTCAGCGCGCACATCCACCGGCAGCAGGCAGGACCACAGCTGCCCGGCTGGGGGATTACAAGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS GCA 72 bp GATGGTCAGGGACCCGGCGGCCTTCTGGATGCACGCTaGCGCAGCGCTCCAAGATGCCGAGTCTGGGGGATA +
Preference number: 6 (lower is better)
Translates to: DGQGPGGLLDAR*RSAPRCRVWGI
Trigger: TATCCCCCAGACTCGGCATCTTGGAGCGCTGCGGCAGCGTGCATCCAGAAGGCCGCCGGGTCCCTGACCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS TCA 72 bp GCGGCTCCTCGTACGGTCTGTCTGCGAGGGAGGCGATaGTGCGCTTGCGATGGCCGAGCAGCTGGACCTTCA +
Preference number: 6 (lower is better)
Translates to: AAPRTVCLRGRR*CACDGRAAGPS
Trigger: TGAAGGTCCAGCTGCTCGGCCATCGCAAGCGCATCATCGCCTCCCTCGCAGACAGACCGTACGAGGAGCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS GCA 72 bp GGCCTTCTGGATGCACGCTGCCGCAGCGCTCCAAGATaGCGAGTCTGGGGGATACTTGAGCTCCCCTGCCCT +
Preference number: 6 (lower is better)
Translates to: GLLDARCRSAPR*RVWGILELPCP
Trigger: AGGGCAGGGGAGCTCAAGTATCCCCCAGACTCGGCATCTTGGAGCGCTGCGGCAGCGTGCATCCAGAAGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS CCA 72 bp GCAGAACAGATGATGGTCAGGGACCCGGCGGCCTTCTaGATGCACGCTGCCGCAGCGCTCCAAGATGCCGAG +
Preference number: 6 (lower is better)
Translates to: AEQMMVRDPAAF*MHAAAALQDAE
Trigger: CTCGGCATCTTGGAGCGCTGCGGCAGCGTGCATCCAGAAGGCCGCCGGGTCCCTGACCATCATCTGTTCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS CCA 72 bp GGTCTGTCTGCGAGGGAGGCGATGATGCGCTTGCGATaGCCGAGCAGCTGGACCTTCAGGACATTGACGAGC +
Preference number: 6 (lower is better)
Translates to: GLSAREAMMRLR*PSSWTFRTLTS
Trigger: GCTCGTCAATGTCCTGAAGGTCCAGCTGCTCGGCCATCGCAAGCGCATCATCGCCTCCCTCGCAGACAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS CCA 72 bp TTCATTCTTGCTTGTAATCCCCCAGCCGGGCAGCTGTaGTCCTGCCTGCTGCCGGTGGATGTGCGCGCTGAC +
Preference number: 6 (lower is better)
Translates to: FILACNPPAGQL*SCLLPVDVRAD
Trigger: GTCAGCGCGCACATCCACCGGCAGCAGGCAGGACCACAGCTGCCCGGCTGGGGGATTACAAGCAAGAATGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS CAA 90 bp GGCTTCATAACCACAGGACTCGAAGATGAGTTTCTCTGGCTGGTGTaGCCAACTCTGCACTGGGGCGTAGGGGGCTGCCAGGCTCGGGGG +
Preference number: 6 (lower is better)
Translates to: GFITTGLEDEFLWLV*PTLHWGVGGCQARG
Trigger: CCCCCGAGCCTGGCAGCCCCCTACGCCCCAGTGCAGAGTTGGCAACACCAGCCAGAGAAACTCATCTTCGAGTCCTGTGGTTATGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp CCGGTCTCCTTCCTCAGCACCACCAGGGTGCGGAGATaGTGTGTGAGTCAAAGTTTCAGGGTGCGAGCGGCT +
Preference number: 6 (lower is better)
Translates to: PVSFLSTTRVRR*CVSQSFRVRAA
Trigger: AGCCGCTCGCACCCTGAAACTTTGACTCACACAGCATCTCCGCACCCTGGTGGTGCTGAGGAAGGAGACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp CCCCTGGAGGCAGCAGCAGATCTGCCGACCGCCCAGTaGAGGAATCATTCTGACTCAGTGGGGATGACGTCT +
Preference number: 6 (lower is better)
Translates to: PLEAAADLPTAQ*RNHSDSVGMTS
Trigger: AGACGTCATCCCCACTGAGTCAGAATGATTCCTGCACTGGGCGGTCGGCAGATCTGCTGCTGCCTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CCA 72 bp GTGGTCTTCTTCCTCTTCATCGGGCGGTGGCTTTGCTaGAGGTGGTGGACGTTCCCTAGGCCTCACTCCAGC +
Preference number: 6 (lower is better)
Translates to: VVFFLFIGRWLC*RWWTFPRPHSS
Trigger: GCTGGAGTGAGGCCTAGGGAACGTCCACCACCTCCAGCAAAGCCACCGCCCGATGAAGAGGAAGAAGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp AGGGAGGCGATGATGCGCTTGCGATGGCCGAGCAGCTaGACCTTCAGGACATTGACGAGCTCTAGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: REAMMRLRWPSS*TFRTLTSSSSQ
Trigger: CTGGGAGCTAGAGCTCGTCAATGTCCTGAAGGTCCAGCTGCTCGGCCATCGCAAGCGCATCATCGCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS CCA 72 bp TTTCAATCATCTCAGCTGCAGAGGCGCCCGTCGCCCTaGACTTCTGGGCCTGCAGGGCCAACTGATAGGCCA +
Preference number: 6 (lower is better)
Translates to: FQSSQLQRRPSP*TSGPAGPTDRP
Trigger: TGGCCTATCAGTTGGCCCTGCAGGCCCAGAAGTCCAGGGCGACGGGCGCCTCTGCAGCTGAGATGATTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CAA 72 bp TCGTACGGTCTGTCTGCGAGGGAGGCGATGATGCGCTaGCGATGGCCGAGCAGCTGGACCTTCAGGACATTG +
Preference number: 6 (lower is better)
Translates to: SYGLSAREAMMR*RWPSSWTFRTL
Trigger: CAATGTCCTGAAGGTCCAGCTGCTCGGCCATCGCAAGCGCATCATCGCCTCCCTCGCAGACAGACCGTACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS TCA 72 bp CCTTCCTCAGCACCACCAGGGTGCGGAGATGCTGTGTaGGTCAAAGTTTCAGGGTGCGAGCGGCTGTTGGTG +
Preference number: 6 (lower is better)
Translates to: PSSAPPGCGDAV*VKVSGCERLLV
Trigger: CACCAACAGCCGCTCGCACCCTGAAACTTTGACTCACACAGCATCTCCGCACCCTGGTGGTGCTGAGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CCA 72 bp ACTCCTGCTGCCTCAGCCTCCTTGTTCGTGGAGTCTTaGTCAGATGATCGCCCGCTGGCCATGCTGTCCAAC +
Preference number: 6 (lower is better)
Translates to: TPAASASLFVES*SDDRPLAMLSN
Trigger: GTTGGACAGCATGGCCAGCGGGCGATCATCTGACCAAGACTCCACGAACAAGGAGGCTGAGGCAGCAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp TTCCTCTTCATCGGGCGGTGGCTTTGCTGGAGGTGGTaGACGTTCCCTAGGCCTCACTCCAGCAGGTTTCAC +
Preference number: 6 (lower is better)
Translates to: FLFIGRWLCWRW*TFPRPHSSRFH
Trigger: GTGAAACCTGCTGGAGTGAGGCCTAGGGAACGTCCACCACCTCCAGCAAAGCCACCGCCCGATGAAGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp CCTATGCCCCCACGTCTATGTTTCCGCAGCACAGTGTaGTTCCTCAGTGGCTCAGTTGGTGCTGAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: PMPPRLCFRSTV*FLSGSVGAEAP
Trigger: CGGAGCCTCAGCACCAACTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACATAGACGTGGGGGCATAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS CCA 72 bp GAGTCTGGGGGATACTTGAGCTCCCCTGCCCTTGAATaGGGAAGTCTGCTCCAGGAGCCTACGTGGCAGGTT +
Preference number: 6 (lower is better)
Translates to: ESGGYLSSPALE*GSLLQEPTWQV
Trigger: AACCTGCCACGTAGGCTCCTGGAGCAGACTTCCCCATTCAAGGGCAGGGGAGCTCAAGTATCCCCCAGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS CAA 72 bp GACTTGGACAAGCTGCGGCTGAGTTTGAGTTCAGCTTaGGGTTTGCTAGTGGGAGGCGCTCGGCTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: DLDKLRLSLSSA*GLLVGGARLLA
Trigger: GGCCAGGAGCCGAGCGCCTCCCACTAGCAAACCCAAAGCTGAACTCAAACTCAGCCGCAGCTTGTCCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CAA 72 bp ACCACAGGACTCGAAGATGAGTTTCTCTGGCTGGTGTaGCCAACTCTGCACTGGGGCGTAGGGGGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: TTGLEDEFLWLV*PTLHWGVGGCQ
Trigger: CTGGCAGCCCCCTACGCCCCAGTGCAGAGTTGGCAACACCAGCCAGAGAAACTCATCTTCGAGTCCTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CAA 90 bp CGCCCGTACAGTGCTGCCAGGTCCAAAGGGGTCTCGAATTTGTTGTaGCGCATGGTGGGGTCCGTCAGCTCCTCTAAGAGCACCTTCACC +
Preference number: 6 (lower is better)
Translates to: RPYSAARSKGVSNLL*RMVGSVSSSKSTFT
Trigger: GGTGAAGGTGCTCTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACTGTACGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CAA 90 bp TCCAGTCGCCCGTACAGTGCTGCCAGGTCCAAAGGGGTCTCGAATTaGTTGTTGCGCATGGTGGGGTCCGTCAGCTCCTCTAAGAGCACC +
Preference number: 6 (lower is better)
Translates to: SSRPYSAARSKGVSN*LLRMVGSVSSSKST
Trigger: GGTGCTCTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACTGTACGGGCGACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CAA 90 bp AGTCGCCCGTACAGTGCTGCCAGGTCCAAAGGGGTCTCGAATTTGTaGTTGCGCATGGTGGGGTCCGTCAGCTCCTCTAAGAGCACCTTC +
Preference number: 6 (lower is better)
Translates to: SRPYSAARSKGVSNL*LRMVGSVSSSKSTF
Trigger: GAAGGTGCTCTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACTGTACGGGCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CAA 90 bp GGCACTGCGGATTTCCTCACGCCGACCCGAGGCTTAGGCACCGGTTaGGAAGATTTTGTTTCAATCATCTCAGCTGCAGAGGCGCCCGTC +
Preference number: 6 (lower is better)
Translates to: GTADFLTPTRGLGTG*EDFVSIISAAEAPV
Trigger: GACGGGCGCCTCTGCAGCTGAGATGATTGAAACAAAATCTTCCAAACCGGTGCCTAAGCCTCGGGTCGGCGTGAGGAAATCCGCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS TCA 72 bp TGCCTCAGCCTCCTTGTTCGTGGAGTCTTGGTCAGATaGTCGCCCGCTGGCCATGCTGTCCAACGAATGGCA +
Preference number: 6 (lower is better)
Translates to: CLSLLVRGVLVR*SPAGHAVQRMA
Trigger: TGCCATTCGTTGGACAGCATGGCCAGCGGGCGATCATCTGACCAAGACTCCACGAACAAGGAGGCTGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 72 bp AAGCACTGCCCATCTCCGTCTGGTAGTTGCTGTCCATaGCAGCATCGAGGAGGACCTGGACCACGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: KHCPSPSGSCCP*QHRGGPGPRLC
Trigger: ACAAAGCCGTGGTCCAGGTCCTCCTCGATGCTGGCATGGACAGCAACTACCAGACGGAGATGGGCAGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 72 bp ACGTTCCCTAGGCCTCACTCCAGCAGGTTTCACTCCTaGTGCCTCAGCCTCCTTGTTCGTGGAGTCTTGGTC +
Preference number: 6 (lower is better)
Translates to: TFPRPHSSRFHS*CLSLLVRGVLV
Trigger: GACCAAGACTCCACGAACAAGGAGGCTGAGGCAGCAGGAGTGAAACCTGCTGGAGTGAGGCCTAGGGAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 72 bp TGCTGTGGGTCGCTGATGCCGATGTCCCGCAGGTCCTaGTCTTCCATCACATTAGACCCCAGGAAGTGGACA +
Preference number: 6 (lower is better)
Translates to: CCGSLMPMSRRS*SSITLDPRKWT
Trigger: TGTCCACTTCCTGGGGTCTAATGTGATGGAAGAGCAGGACCTGCGGGACATCGGCATCAGCGACCCACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS CCA 72 bp GTCAGCTCCTCTAAGAGCACCTTCACCACCTCTGTGTaGCCATACTGCGCTGCACAATGCAGGGCTGTCTCG +
Preference number: 6 (lower is better)
Translates to: VSSSKSTFTTSV*PYCAAQCRAVS
Trigger: CGAGACAGCCCTGCATTGTGCAGCGCAGTATGGCCACACAGAGGTGGTGAAGGTGCTCTTAGAGGAGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp TTCTTCCTCTTCATCGGGCGGTGGCTTTGCTGGAGGTaGTGGACGTTCCCTAGGCCTCACTCCAGCAGGTTT +
Preference number: 6 (lower is better)
Translates to: FFLFIGRWLCWR*WTFPRPHSSRF
Trigger: AAACCTGCTGGAGTGAGGCCTAGGGAACGTCCACCACCTCCAGCAAAGCCACCGCCCGATGAAGAGGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp AGTGGCTCAGTTGGTGCTGAGGCTCCGCTTAGAGTCTaGTTTGGGGTCCACAACCCAGGAGACACTGGCATG +
Preference number: 6 (lower is better)
Translates to: SGSVGAEAPLRV*FGVHNPGDTGM
Trigger: CATGCCAGTGTCTCCTGGGTTGTGGACCCCAAACCAGACTCTAAGCGGAGCCTCAGCACCAACTGAGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS CAA 72 bp CCGTACAGTGCTGCCAGGTCCAAAGGGGTCTCGAATTaGTTGTTGCGCATGGTGGGGTCCGTCAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: PYSAARSKGVSN*LLRMVGSVSSS
Trigger: AGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACTGTACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CAA 90 bp CAGGTCAGGAGATCAGAGTCAGACTTGGACAAGCTGCGGCTGAGTTaGAGTTCAGCTTTGGGTTTGCTAGTGGGAGGCGCTCGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: QVRRSESDLDKLRLS*SSALGLLVGGARLL
Trigger: CAGGAGCCGAGCGCCTCCCACTAGCAAACCCAAAGCTGAACTCAAACTCAGCCGCAGCTTGTCCAAGTCTGACTCTGATCTCCTGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CAA 90 bp TCCAGTGCGGATTTCCTCACGCCGACCCGAGGCTTAGGCACCGGTTaGGAAGATTTTGTTTCAATCATCTCAGCTGCAGAGGCGCCCGTC +
Preference number: 6 (lower is better)
Translates to: SSADFLTPTRGLGTG*EDFVSIISAAEAPV
Trigger: GACGGGCGCCTCTGCAGCTGAGATGATTGAAACAAAATCTTCCAAACCGGTGCCTAAGCCTCGGGTCGGCGTGAGGAAATCCGCACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS CAA 90 bp TTTGGGGTCCACAACCCAGGAGACACTGGCATGGGATTGGGCATCTaGGTCCATATCAGGTGGTTCCAGTGCGGATTTCCTCACGCCGAC +
Preference number: 6 (lower is better)
Translates to: FGVHNPGDTGMGLGI*VHIRWFQCGFPHAD
Trigger: GTCGGCGTGAGGAAATCCGCACTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS TCA 72 bp CCGCCCAGTGCAGGAATCATTCTGACTCAGTGGGGATaGCGTCTGGGAGAGCAAATCTTGGCACCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: PPSAGIILTQWG*RLGEQILAPQL
Trigger: CAGCTGAGGTGCCAAGATTTGCTCTCCCAGACGTCATCCCCACTGAGTCAGAATGATTCCTGCACTGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp GTGCTGCCAGGTCCAAAGGGGTCTCGAATTTGTTGTTaGGCATGGTGGGGTCCGTCAGCTCCTCTAAGAGCA +
Preference number: 6 (lower is better)
Translates to: VLPGPKGSRICC*AWWGPSAPLRA
Trigger: TGCTCTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp GGGTGTGTAGCCAGTGCTGTCAACACAGTTCACATTTaGCCCTCTCCACATGCTGAGCAGACTGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: GCVASAVNTVHI*PSPHAEQTGEG
Trigger: CCCCTCTCCAGTCTGCTCAGCATGTGGAGAGGGCCAAATGTGAACTGTGTTGACAGCACTGGCTACACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp GGTCTCATACTTGGTGCTGAGGCTCCGCTTAGAGTCTaGTTTGGGGTCCACAACCCAGGAGACACTGGCATG +
Preference number: 6 (lower is better)
Translates to: GLILGAEAPLRV*FGVHNPGDTGM
Trigger: CATGCCAGTGTCTCCTGGGTTGTGGACCCCAAACCAGACTCTAAGCGGAGCCTCAGCACCAAGTATGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS CAA 72 bp AGTGCTGCCAGGTCCAAAGGGGTCTCGAATTTGTTGTaGCGCATGGTGGGGTCCGTCAGCTCCTCTAAGAGC +
Preference number: 6 (lower is better)
Translates to: SAARSKGVSNLL*RMVGSVSSSKS
Trigger: GCTCTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CAA 90 bp GGGCATCTCCTTTCCAGGCTGCCAAATGCAGAGGGTAGCAGCCTTTaGAGTCAGCCACGTTGGTCAGCGCATCGTTCCTCAGAAGAACCT +
Preference number: 6 (lower is better)
Translates to: GHLLSRLPNAEGSSL*SQPRWSAHRSSEEP
Trigger: AGGTTCTTCTGAGGAACGATGCGCTGACCAACGTGGCTGACTCAAAAGGCTGCTACCCTCTGCATTTGGCAGCCTGGAAAGGAGATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CAA 90 bp TCCCAGGTACTTTCTGCCCCTTGGGGCAGGACAATGCCAACTTCCTaGGTTATCTACAAGACCCTGGTGACCAACTCTGCCAGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: SQVLSAPWGRTMPTS*VIYKTLVTNSASLH
Trigger: GTGGAGGCTGGCAGAGTTGGTCACCAGGGTCTTGTAGATAACCAAGGAAGTTGGCATTGTCCTGCCCCAAGGGGCAGAAAGTACCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS CAA 90 bp AGAGTCTGGTTTGGGGTCCACAACCCAGGAGACACTGGCATGGGATaGGGCATCTTGGTCCATATCAGGTGGTTCCAGCTTGACTCCAGG +
Preference number: 6 (lower is better)
Translates to: RVWFGVHNPGDTGMG*GILVHIRWFQLDSR
Trigger: CCTGGAGTCAAGCTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAACCAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS TCA 72 bp TTTCCAGGCTGCCAAATGCAGAGGGTAGCAGCCTTTTaGGTCAGCCACGTTGGTCAGCGCATCGTTCCTCAG +
Preference number: 6 (lower is better)
Translates to: FPGCQMQRVAAF*VSHVGQRIVPQ
Trigger: CTGAGGAACGATGCGCTGACCAACGTGGCTGACTCAAAAGGCTGCTACCCTCTGCATTTGGCAGCCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS TCA 72 bp AGCAGATCTGCCGACCGCCCAGTGCAGGAATCATTCTaGCTCAGTGGGGATGACGTCTGGGAGAGCAAATCT +
Preference number: 6 (lower is better)
Translates to: SRSADRPVQESF*LSGDDVWESKS
Trigger: AGATTTGCTCTCCCAGACGTCATCCCCACTGAGTCAGAATGATTCCTGCACTGGGCGGTCGGCAGATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS TCA 72 bp CTCTGCTCCAGCGTCCGTAAACCTCCAGTGAACTCCTaGCACGGTGAAAGTCATTCTGCCGTTCCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: LCSSVRKPPVNS*HGESHSAVPRY
Trigger: GTACCTGGGAACGGCAGAATGACTTTCACCGTGTCAGGAGTTCACTGGAGGTTTACGGACGCTGGAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS GCA 72 bp GAGCACCTTCACCACCTCTGTGTGGCCATACTGCGCTaGACAATGCAGGGCTGTCTCGTTGTCATTGTTCTG +
Preference number: 6 (lower is better)
Translates to: EHLHHLCVAILR*TMQGCLVVIVL
Trigger: CAGAACAATGACAACGAGACAGCCCTGCATTGTGCAGCGCAGTATGGCCACACAGAGGTGGTGAAGGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS GCA 72 bp GAGCATTTTCACCACCTCCAGTCGCCCGTACAGTGCTaGCAGGTCCAAAGGGGTCTCGAATTTGTTGTTGCG +
Preference number: 6 (lower is better)
Translates to: EHFHHLQSPVQC*QVQRGLEFVVA
Trigger: CGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACTGTACGGGCGACTGGAGGTGGTGAAAATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp GGTCCAAAGGGGTCTCGAATTTGTTGTTGCGCATGGTaGGGTCCGTCAGCTCCTCTAAGAGCACCTTCACCA +
Preference number: 6 (lower is better)
Translates to: GPKGSRICCCAW*GPSAPLRAPSP
Trigger: TGGTGAAGGTGCTCTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp CCAGGTCCAAAGGGGTCTCGAATTTGTTGTTGCGCATaGTGGGGTCCGTCAGCTCCTCTAAGAGCACCTTCA +
Preference number: 6 (lower is better)
Translates to: PGPKGSRICCCA*WGPSAPLRAPS
Trigger: TGAAGGTGCTCTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp GCCCGCTGGCCATGCTGTCCAACGAATGGCAGGAGATaGCATTATACAGAGCTTCGTAGGGACCCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: ARWPCCPTNGRR*HYTELRRDPLL
Trigger: AAGAAGAGGGTCCCTACGAAGCTCTGTATAATGCCATCTCCTGCCATTCGTTGGACAGCATGGCCAGCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp CTTATCTATGTGGTCTTCTTCCTCTTCATCGGGCGGTaGCTTTGCTGGAGGTGGTGGACGTTCCCTAGGCCT +
Preference number: 6 (lower is better)
Translates to: LIYVVFFLFIGR*LCWRWWTFPRP
Trigger: AGGCCTAGGGAACGTCCACCACCTCCAGCAAAGCCACCGCCCGATGAAGAGGAAGAAGACCACATAGATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp GGCTTCATAACCACAGGACTCGAAGATGAGTTTCTCTaGCTGGTGTTGCCAACTCTGCACTGGGGCGTAGGG +
Preference number: 6 (lower is better)
Translates to: GFITTGLEDEFL*LVLPTLHWGVG
Trigger: CCCTACGCCCCAGTGCAGAGTTGGCAACACCAGCCAGAGAAACTCATCTTCGAGTCCTGTGGTTATGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CCA 72 bp TCTGGTTTGGGGTCCACAACCCAGGAGACACTGGCATaGGATTGGGCATCTTGGTCCATATCAGGTGGTTCC +
Preference number: 6 (lower is better)
Translates to: SGLGSTTQETLA*DWASWSISGGS
Trigger: GGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CAA 72 bp CTTTCCAGGCTGCCAAATGCAGAGGGTAGCAGCCTTTaGAGTCAGCCACGTTGGTCAGCGCATCGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: LSRLPNAEGSSL*SQPRWSAHRSS
Trigger: TGAGGAACGATGCGCTGACCAACGTGGCTGACTCAAAAGGCTGCTACCCTCTGCATTTGGCAGCCTGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CAA 72 bp TACAGTGCTGCCAGGTCCAAAGGGGTCTCGAATTTGTaGTTGCGCATGGTGGGGTCCGTCAGCTCCTCTAAG +
Preference number: 6 (lower is better)
Translates to: YSAARSKGVSNL*LRMVGSVSSSK
Trigger: CTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CAA 72 bp GTTCCTGCAGCCAGCAGGATTTGCACCACATCGGTCTaGCCAAACAAAGCAGCCTCATGCAAAGCACTGCCC +
Preference number: 6 (lower is better)
Translates to: VPAASRICTTSV*PNKAASCKALP
Trigger: GGGCAGTGCTTTGCATGAGGCTGCTTTGTTTGGCAAGACCGATGTGGTGCAAATCCTGCTGGCTGCAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CAA 72 bp TTTGGGGTCCACAACCCAGGAGACACTGGCATGGGATaGGGCATCTTGGTCCATATCAGGTGGTTCCAGTGC +
Preference number: 6 (lower is better)
Translates to: FGVHNPGDTGMG*GILVHIRWFQC
Trigger: GCACTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS CAA 72 bp CACAACCCAGGAGACACTGGCATGGGATTGGGCATCTaGGTCCATATCAGGTGGTTCCAGCTTGACTCCAGG +
Preference number: 6 (lower is better)
Translates to: HNPGDTGMGLGI*VHIRWFQLDSR
Trigger: CCTGGAGTCAAGCTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS CAA 90 bp TTGACGTCAGTTCCTGCAGCCAGCAGGATTTGCACCACATCGGTCTaGCCAAACAAAGCAGCCTCATGCAAAGCACTGCCCATCTCCGTC +
Preference number: 6 (lower is better)
Translates to: LTSVPAASRICTTSV*PNKAASCKALPISV
Trigger: GACGGAGATGGGCAGTGCTTTGCATGAGGCTGCTTTGTTTGGCAAGACCGATGTGGTGCAAATCCTGCTGGCTGCAGGAACTGACGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CAA 90 bp GCGAAGGAGGGTGACTTCTCTAGCCTTTTCTTCCCAATGCTGCAGTaGGATAAGGACTCACTCCGACTCCCCATGGTAGCGTCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: AKEGDFSSLFFPMLQ*DKDSLRLPMVASSV
Trigger: CACAGAGGACGCTACCATGGGGAGTCGGAGTGAGTCCTTATCCAACTGCAGCATTGGGAAGAAAAGGCTAGAGAAGTCACCCTCCTTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CAA 90 bp CTAGCTCCCAGAGGTTCTTCACGGTGTCAATGGAGCTGTAACCACTaGACAAGAAGGAATGGACGTAGTCCTGCAGCCCCAGGGAGTCCA +
Preference number: 6 (lower is better)
Translates to: LAPRGSSRCQWSCNH*TRRNGRSPAAPGSP
Trigger: TGGACTCCCTGGGGCTGCAGGACTACGTCCATTCCTTCTTGTCAAGTGGTTACAGCTCCATTGACACCGTGAAGAACCTCTGGGAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS CAA 90 bp AGAGTCTGGTTTGGGGTCCACAACCCAGGAGACACTGGCATGGGATaGGGCATCTTGGTCCATATCAGGTGGTTCCAGTGCGGATTTCCT +
Preference number: 6 (lower is better)
Translates to: RVWFGVHNPGDTGMG*GILVHIRWFQCGFP
Trigger: AGGAAATCCGCACTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAACCAGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS TCA 72 bp CTCCAGGAGCCTACGTGGCAGGTTCTTCTATGCCCATaGAGTCAAGTGTCCCCGGGTGCTGATTCATTCTTG +
Preference number: 6 (lower is better)
Translates to: LQEPTWQVLLCP*SQVSPGADSFL
Trigger: CAAGAATGAATCAGCACCCGGGGACACTTGACTTCATGGGCATAGAAGAACCTGCCACGTAGGCTCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS GCA 72 bp TTCCTGCAGCCAGCAGGATTTGCACCACATCGGTCTTaGCAAACAAAGCAGCCTCATGCAAAGCACTGCCCA +
Preference number: 6 (lower is better)
Translates to: FLQPAGFAPHRS*QTKQPHAKHCP
Trigger: TGGGCAGTGCTTTGCATGAGGCTGCTTTGTTTGGCAAGACCGATGTGGTGCAAATCCTGCTGGCTGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 72 bp TCGTGGAGTCTTGGTCAGATGATCGCCCGCTGGCCATaGTGTCCAACGAATGGCAGGAGATGGCATTATACA +
Preference number: 6 (lower is better)
Translates to: SWSLGQMIARWP*CPTNGRRWHYT
Trigger: TGTATAATGCCATCTCCTGCCATTCGTTGGACAGCATGGCCAGCGGGCGATCATCTGACCAAGACTCCACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 72 bp TCAAAGCCATTCAGAAGCAACTTGCTCTCATACTGCTaGAGCCCAATCGACTCCAGCCACTCCCCGACACTC +
Preference number: 6 (lower is better)
Translates to: SKPFRSNLLSYC*SPIDSSHSPTL
Trigger: GAGTGTCGGGGAGTGGCTGGAGTCGATTGGGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATGGCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS GCA 72 bp TCGTCAAAGCCATTCAGAAGCAACTTGCTCTCATACTaGTGCAGCCCAATCGACTCCAGCCACTCCCCGACA +
Preference number: 6 (lower is better)
Translates to: SSKPFRSNLLSY*CSPIDSSHSPT
Trigger: TGTCGGGGAGTGGCTGGAGTCGATTGGGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATGGCTTTGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS GCA 72 bp GAGCACCTTCACCACCTCTGTGTGGCCATACTGCGCTaGACAATGCAGGGCTGTCTCGTTGTCATTGTTCTT +
Preference number: 6 (lower is better)
Translates to: EHLHHLCVAILR*TMQGCLVVIVL
Trigger: AAGAACAATGACAACGAGACAGCCCTGCATTGTGCAGCGCAGTATGGCCACACAGAGGTGGTGAAGGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp AATGCAGAGGGTAGCAGCCTTTTGAGTCAGCCACGTTaGTCAGCGCATCGTTCCTCAGAAGAACCTCGACCA +
Preference number: 6 (lower is better)
Translates to: NAEGSSLLSQPR*SAHRSSEEPRP
Trigger: TGGTCGAGGTTCTTCTGAGGAACGATGCGCTGACCAACGTGGCTGACTCAAAAGGCTGCTACCCTCTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS CCA 72 bp ACAACCCAGGAGACACTGGCATGGGATTGGGCATCTTaGTCCATATCAGGTGGTTCCAGTGCGGATTTCCTC +
Preference number: 6 (lower is better)
Translates to: TTQETLAWDWAS*SISGGSSADFL
Trigger: GAGGAAATCCGCACTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS CCA 72 bp ACAACCCAGGAGACACTGGCATGGGATTGGGCATCTTaGTCCATATCAGGTGGTTCCAGCTTGACTCCAGGA +
Preference number: 6 (lower is better)
Translates to: TTQETLAWDWAS*SISGGSSLTPG
Trigger: TCCTGGAGTCAAGCTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS CAA 72 bp CACAACCCAGGAGACACTGGCATGGGATTGGGCATCTaGGTCCATATCAGGTGGTTCCAGTGCGGATTTCCT +
Preference number: 6 (lower is better)
Translates to: HNPGDTGMGLGI*VHIRWFQCGFP
Trigger: AGGAAATCCGCACTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS CAA 72 bp CTTTCTGCCCCTTGGGGCAGGACAATGCCAACTTCCTaGGTTATCTACAAGACCCTGGTGACCAACTCTGCC +
Preference number: 6 (lower is better)
Translates to: LSAPWGRTMPTS*VIYKTLVTNSA
Trigger: GGCAGAGTTGGTCACCAGGGTCTTGTAGATAACCAAGGAAGTTGGCATTGTCCTGCCCCAAGGGGCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS CAA 72 bp TTTGGGGTCCACAACCCAGGAGACACTGGCATGGGATaGGGCATCTTGGTCCATATCAGGTGGTTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: FGVHNPGDTGMG*GILVHIRWFQL
Trigger: AAGCTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS CAA 90 bp TTTGGGGTCCACAACCCAGGAGACACTGGCATGGGATTGGGCATCTaGGTCCATATCAGGTGGTTCCAGCTTGACTCCAGGACTAACAGA +
Preference number: 6 (lower is better)
Translates to: FGVHNPGDTGMGLGI*VHIRWFQLDSRTNR
Trigger: TCTGTTAGTCCTGGAGTCAAGCTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTTGTGGACCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649117.1
CDS GCA 72 bp AAGGAGCATTTTCACCACCTCCAGTCGCCCGTACAGTaGTGCCAGGTCCAAAGGGGTCTCGAATTTGTTGTT +
Preference number: 6 (lower is better)
Translates to: KEHFHHLQSPVQ*CQVQRGLEFVV
Trigger: AACAACAAATTCGAGACCCCTTTGGACCTGGCAGCACTGTACGGGCGACTGGAGGTGGTGAAAATGCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS GCA 72 bp AGGAGGGTGACTTCTCTAGCCTTTTCTTCCCAATGCTaGAGTTGGATAAGGACTCACTCCGACTCCCCATGG +
Preference number: 6 (lower is better)
Translates to: RRVTSLAFSSQC*SWIRTHSDSPW
Trigger: CCATGGGGAGTCGGAGTGAGTCCTTATCCAACTGCAGCATTGGGAAGAAAAGGCTAGAGAAGTCACCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp CGAAGGAGGGTGACTTCTCTAGCCTTTTCTTCCCAATaGTGCAGTTGGATAAGGACTCACTCCGACTCCCCA +
Preference number: 6 (lower is better)
Translates to: RRRVTSLAFSSQ*CSWIRTHSDSP
Trigger: TGGGGAGTCGGAGTGAGTCCTTATCCAACTGCAGCATTGGGAAGAAAAGGCTAGAGAAGTCACCCTCCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp GGAAGTGGACATCGTCAAAGCCATTCAGAAGCAACTTaGTCTCATACTGCTGCAGCCCAATCGACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: GSGHRQSHSEAT*SHTAAAQSTPA
Trigger: GGCTGGAGTCGATTGGGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATGGCTTTGACGATGTCCACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS GCA 72 bp GTGATGGACAGGATGATGGTGGGGATCTTCTTCATGTaGTCCGTAGATTTCCGCATCTTGGCACAGGCGTCT +
Preference number: 6 (lower is better)
Translates to: VMDRMMVGIFFM*SVDFRILAQAS
Trigger: AGACGCCTGTGCCAAGATGCGGAAATCTACGGAGCACATGAAGAAGATCCCCACCATCATCCTGTCCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp CTGGGCCGCACAGGAAATGTTCCGGATCTCGTGCTCTaGAATGACGTTCTTGTTGGAGGCATCGATGAACTT +
Preference number: 6 (lower is better)
Translates to: LGRTGNVPDLVL*NDVLVGGIDEL
Trigger: AAGTTCATCGATGCCTCCAACAAGAACGTCATTGCAGAGCACGAGATCCGGAACATTTCCTGTGCGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS GCA 72 bp TTCACCACCTCTGTGTGGCCATACTGCGCTGCACAATaGAGGGCTGTCTCGTTGTCATTGTTCTTGGCATTG +
Preference number: 6 (lower is better)
Translates to: FTTSVWPYCAAQ*RAVSLSLFLAL
Trigger: CAATGCCAAGAACAATGACAACGAGACAGCCCTGCATTGTGCAGCGCAGTATGGCCACACAGAGGTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649117.1
ENST00000650178.1
CDS CAA 72 bp GGTGACTTCTCTAGCCTTTTCTTCCCAATGCTGCAGTaGGATAAGGACTCACTCCGACTCCCCATGGTAGCG +
Preference number: 6 (lower is better)
Translates to: GDFSSLFFPMLQ*DKDSLRLPMVA
Trigger: CGCTACCATGGGGAGTCGGAGTGAGTCCTTATCCAACTGCAGCATTGGGAAGAAAAGGCTAGAGAAGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CAA 90 bp GACACGGTGAAAGTCATTCTGCCGTTCCCAGGTACTTTCTGCCCCTaGGGGCAGGACAATGCCAACTTCCTTGGTTATCTACAAGACCCT +
Preference number: 6 (lower is better)
Translates to: DTVKVILPFPGTFCP*GQDNANFLGYLQDP
Trigger: AGGGTCTTGTAGATAACCAAGGAAGTTGGCATTGTCCTGCCCCAAGGGGCAGAAAGTACCTGGGAACGGCAGAATGACTTTCACCGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS TCA 72 bp GCATTCTGTTCATTGACTCTGGTGTGTGAAGGCCCTTaGTGGATGAGCAACCGCACTATCTGGGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: AFCSLTLVCEGP*WMSNRTIWASP
Trigger: AGGAGATGCCCAGATAGTGCGGTTGCTCATCCATCAAGGGCCTTCACACACCAGAGTCAATGAACAGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649117.1
ENST00000650178.1
CDS GCA 72 bp TTCACCACCTCTGTGTGGCCATACTGCGCTGCACAATaGAGGGCTGTCTCGTTGTCATTGTTCTGTTCATTG +
Preference number: 6 (lower is better)
Translates to: FTTSVWPYCAAQ*RAVSLSLFCSL
Trigger: CAATGAACAGAACAATGACAACGAGACAGCCCTGCATTGTGCAGCGCAGTATGGCCACACAGAGGTGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS GCA 72 bp CAACAGTTCATAAGGGTGTTCGTCTTCTTCCCGGGCTaGACTCCCATGAATCCTAGGTCTCATGGACAGAAC +
Preference number: 6 (lower is better)
Translates to: QQFIRVFVFFPG*TPMNPRSHGQN
Trigger: GTTCTGTCCATGAGACCTAGGATTCATGGGAGTGCAGCCCGGGAAGAAGACGAACACCCTTATGAACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CCA 72 bp CGAGCTCTAGCTCCCAGAGGTTCTTCACGGTGTCAATaGAGCTGTAACCACTTGACAAGAAGGAATGGACGT +
Preference number: 6 (lower is better)
Translates to: RALAPRGSSRCQ*SCNHLTRRNGR
Trigger: ACGTCCATTCCTTCTTGTCAAGTGGTTACAGCTCCATTGACACCGTGAAGAACCTCTGGGAGCTAGAGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS CCA 72 bp AAGTCATTCTGCCGTTCCCAGGTACTTTCTGCCCCTTaGGGCAGGACAATGCCAACTTCCTTGGTTATCTAC +
Preference number: 6 (lower is better)
Translates to: KSFCRSQVLSAP*GRTMPTSLVIY
Trigger: GTAGATAACCAAGGAAGTTGGCATTGTCCTGCCCCAAGGGGCAGAAAGTACCTGGGAACGGCAGAATGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470698.1
CDS CAA 72 bp AGAGGTTCTTCACGGTGTCAATGGAGCTGTAACCACTaGACAAGAAGGAATGGACGTAGTCCTGCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: RGSSRCQWSCNH*TRRNGRSPAAP
Trigger: TGGGGCTGCAGGACTACGTCCATTCCTTCTTGTCAAGTGGTTACAGCTCCATTGACACCGTGAAGAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000470698.1
ENST00000649117.1
CDS CAA 72 bp GATTTCCTCACGCCGACCCGAGGCTTAGGCACCGGTTaGGAAGATTTTGTTTCAATCATCTCAGCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: DFLTPTRGLGTG*EDFVSIISAAE
Trigger: CTCTGCAGCTGAGATGATTGAAACAAAATCTTCCAAACCGGTGCCTAAGCCTCGGGTCGGCGTGAGGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS TCA 72 bp TTGTTCTGTTCATTGACTCTGGTGTGTGAAGGCCCTTaGTGGATGAGCAACCGCACTATCTGGGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: LFCSLTLVCEGP*WMSNRTIWASP
Trigger: AGGAGATGCCCAGATAGTGCGGTTGCTCATCCATCAAGGGCCTTCACACACCAGAGTCAATGAACAGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS CAA 72 bp GTGTCTAGGGCAGTCAGTCCATGGTTATCTTTTATGTaGACGTCAGTTCCTGCAGCCAGCAGGATTTGCACC +
Preference number: 6 (lower is better)
Translates to: VSRAVSPWLSFM*TSVPAASRICT
Trigger: GGTGCAAATCCTGCTGGCTGCAGGAACTGACGTCAACATAAAAGATAACCATGGACTGACTGCCCTAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360359.5
ENST00000649117.1
ENST00000650178.1
CDS TCA 72 bp CTCGTTGTCATTGTTCTGTTCATTGACTCTGGTGTGTaGAGGCCCTTGATGGATGAGCAACCGCACTATCTG +
Preference number: 6 (lower is better)
Translates to: LVVIVLFIDSGV*RPLMDEQPHYL
Trigger: CAGATAGTGCGGTTGCTCATCCATCAAGGGCCTTCACACACCAGAGTCAATGAACAGAACAATGACAACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360359.5
CDS TCA 72 bp CCAGATAATTGGCTTCATAACCACAGGACTCGAAGATaGGTTTCTCTGGCTGGTGTTGCCAACTCTGCACTG +
Preference number: 6 (lower is better)
Translates to: PDNWLHNHRTRR*VSLAGVANSAL
Trigger: CAGTGCAGAGTTGGCAACACCAGCCAGAGAAACTCATCTTCGAGTCCTGTGGTTATGAAGCCAATTATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS TCA 72 bp GATCTCAAGAGCATTCTGTTCATTGACTCTGGTGTGTaGAGGCCCTTGATGGATGAGCAACCGCACTATCTG +
Preference number: 6 (lower is better)
Translates to: DLKSILFIDSGV*RPLMDEQPHYL
Trigger: CAGATAGTGCGGTTGCTCATCCATCAAGGGCCTTCACACACCAGAGTCAATGAACAGAATGCTCTTGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649117.1
ENST00000650178.1
CDS CAA 90 bp TCTGCAATGACGTTCTTGTTGGAGGCATCGATGAACTTGACACCTTaGTATGTGATGGACAGGATGATGGTGGGGATCTTCTTCATGTGC +
Preference number: 6 (lower is better)
Translates to: SAMTFLLEASMNLTP*YVMDRMMVGIFFMC
Trigger: GCACATGAAGAAGATCCCCACCATCATCCTGTCCATCACATACAAAGGTGTCAAGTTCATCGATGCCTCCAACAAGAACGTCATTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CAA 72 bp ACGTTCTTGTTGGAGGCATCGATGAACTTGACACCTTaGTATGTGATGGACAGGATGATGGTGGGGATCTTC +
Preference number: 6 (lower is better)
Translates to: TFLLEASMNLTP*YVMDRMMVGIF
Trigger: GAAGATCCCCACCATCATCCTGTCCATCACATACAAAGGTGTCAAGTTCATCGATGCCTCCAACAAGAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CAA 72 bp TCTGCAATGACGTTCTTGTTGGAGGCATCGATGAACTaGACACCTTTGTATGTGATGGACAGGATGATGGTG +
Preference number: 6 (lower is better)
Translates to: SAMTFLLEASMN*TPLYVMDRMMV
Trigger: CACCATCATCCTGTCCATCACATACAAAGGTGTCAAGTTCATCGATGCCTCCAACAAGAACGTCATTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1
CDS CAA 90 bp TCCGCCTGTGGTCTTTTGTTTTTCCATCCACCAACACCACTTTCTTaGTCTCTGCTGTTAACAACAGTTCATAAGGGTGTTCGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: SACGLLFFHPPTPLS*SLLLTTVHKGVRLL
Trigger: AAGAAGACGAACACCCTTATGAACTGTTGTTAACAGCAGAGACAAAGAAAGTGGTGTTGGTGGATGGAAAAACAAAAGACCACAGGCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360359.5
ENST00000649117.1