RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD9 (Homo sapiens)

Ensembl gene IDs: ENSG00000156381

Ensembl transcript IDs: ENST00000286918.9, ENST00000557902.1, ENST00000559404.5, ENST00000559651.1, ENST00000560748.5

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGAGCCCACCAAGCCCACTCCGGGCTTGGACAGAGGGCAGGCCTaGAGGAAGGCACATCCAACCCCACTGACCGGCATGCACCTGGGG +
Preference number: 1 (lower is better)
Translates to: REPTKPTPGLDRGQA*RKAHPTPLTGMHLG
Trigger: CCCCAGGTGCATGCCGGTCAGTGGGGTTGGATGTGCCTTCCTCCAGGCCTGCCCTCTGTCCAAGCCCGGAGTGGGCTTGGTGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp ATTTCGTGGGGCCCACTCTCAGTGCCCGCCAGCCTGTGTCCTGCCTaGCCAGGCAATGAGTACCGGCGGCAGGCAGCTGCCTCACCCCTG +
Preference number: 1 (lower is better)
Translates to: ISWGPLSVPASLCPA*PGNEYRRQAAASPL
Trigger: CAGGGGTGAGGCAGCTGCCTGCCGCCGGTACTCATTGCCTGGCCAGGCAGGACACAGGCTGGCGGGCACTGAGAGTGGGCCCCACGAAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 90 bp ACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGCCTaGCAGCCCTGTGTGCCCTCCCTGGCCCGGAGTCCACAGGGTGCA +
Preference number: 1 (lower is better)
Translates to: TRYNLFMPQHQPPRA*QPCVPSLARSPQGA
Trigger: TGCACCCTGTGGACTCCGGGCCAGGGAGGGCACACAGGGCTGGCAGGCCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 90 bp CCCCACCAGGATAGTGGTTCTTCCTCCTGCAGACCTTCAGCCCTCTaGTCCTGGCAGGACACTGTGGCCCTCCTGCCCACGTTGGTGCGG +
Preference number: 1 (lower is better)
Translates to: PHQDSGSSSCRPSAL*SWQDTVALLPTLVR
Trigger: CCGCACCAACGTGGGCAGGAGGGCCACAGTGTCCTGCCAGGAGCAGAGGGCTGAAGGTCTGCAGGAGGAAGAACCACTATCCTGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 90 bp TTCCCAGGCAGGGCAGCCTGGCTATCCTCCCTGGTGTCTCGGCTCTaGGAGCGGAGACCCAGCCTCCCAGCCTGGAGTTGTGGTGAATTC +
Preference number: 1 (lower is better)
Translates to: FPGRAAWLSSLVSRL*ERRPSLPAWSCGEF
Trigger: GAATTCACCACAACTCCAGGCTGGGAGGCTGGGTCTCCGCTCTCAGAGCCGAGACACCAGGGAGGATAGCCAGGCTGCCCTGCCTGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp CGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACCTGCCACTTaGAACTCACCTGACCATCCAAGCCCAGCCCCCAGTGCATGCGAC +
Preference number: 1 (lower is better)
Translates to: RAEGPSPAAPRKPAT*NSPDHPSPAPSACD
Trigger: GTCGCATGCACTGGGGGCTGGGCTTGGATGGTCAGGTGAGTTCCAAGTGGCAGGTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 90 bp CCCGAGCCCAGCTGCACCCAGAAAACCTGCCACTTGGAACTCACCTaGCCATCCAAGCCCAGCCCCCAGTGCATGCGACAGATGAGGCAG +
Preference number: 1 (lower is better)
Translates to: PEPSCTQKTCHLELT*PSKPSPQCMRQMRQ
Trigger: CTGCCTCATCTGTCGCATGCACTGGGGGCTGGGCTTGGATGGTCAGGTGAGTTCCAAGTGGCAGGTTTTCTGGGTGCAGCTGGGCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 90 bp CCGGAGTCCACAGGGTGCAAAAGGCTGACCGCACAGGACCTCCCGTaGGAACCCTACGCTGCAGAGCTCGTTCTCTTGGCTTCCAGGCCT +
Preference number: 1 (lower is better)
Translates to: PESTGCKRLTAQDLP*EPYAAELVLLASRP
Trigger: AGGCCTGGAAGCCAAGAGAACGAGCTCTGCAGCGTAGGGTTCTCACGGGAGGTCCTGTGCGGTCAGCCTTTTGCACCCTGTGGACTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 90 bp CGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGGTAACCTaGCAATGGATTTCGTGGGGCCCACTCTCAGTGCCCGCCAGCCTG +
Preference number: 1 (lower is better)
Translates to: RPALHDQPGFFILVT*QWISWGPLSVPASL
Trigger: CAGGCTGGCGGGCACTGAGAGTGGGCCCCACGAAATCCATTGTCAGGTTACCAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 90 bp GTCCCCTCACCCAAATCGATGACATCAGGAGCTAATGGCCCAGGCTaGCCTCCTGCTGCAGTGCCCATAATTCTTCCGGCAGGCCCCGCC +
Preference number: 1 (lower is better)
Translates to: VPSPKSMTSGANGPG*PPAAVPIILPAGPA
Trigger: GGCGGGGCCTGCCGGAAGAATTATGGGCACTGCAGCAGGAGGGCAGCCTGGGCCATTAGCTCCTGATGTCATCGATTTGGGTGAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp CCCCTGCACCTACCGAGCTCCTGCGGCACTCAGCTGTCACCCATCTaGGACGCACACCTGTCCGAGGCTCTAGATCAAGGTGGGAGGTTA +
Preference number: 1 (lower is better)
Translates to: PLHLPSSCGTQLSPI*DAHLSEALDQGGRL
Trigger: TAACCTCCCACCTTGATCTAGAGCCTCGGACAGGTGTGCGTCCCAGATGGGTGACAGCTGAGTGCCGCAGGAGCTCGGTAGGTGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 90 bp GTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTaGAGTCTGGGCTCTGTCACTGTGCTGTCTCTCCATCCTTCCCTC +
Preference number: 1 (lower is better)
Translates to: VQDTQQRGSGTLTPA*SLGSVTVLSLHPSL
Trigger: GAGGGAAGGATGGAGAGACAGCACAGTGACAGAGCCCAGACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp GTCACCCATCTGGGACGCACACCTGTCCGAGGCTCTAGATCAAGGTaGGAGGTTAGTCCTCACTCCCTTCAGGGGCTGGACAGCGAGCTG +
Preference number: 1 (lower is better)
Translates to: VTHLGRTPVRGSRSR*EVSPHSLQGLDSEL
Trigger: CAGCTCGCTGTCCAGCCCCTGAAGGGAGTGAGGACTAACCTCCCACCTTGATCTAGAGCCTCGGACAGGTGTGCGTCCCAGATGGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp AGACTGAGGGCCAAGGCAGAGGTTTGTCCAAGGTCACCCCCAGAGTaGCGGATCCAGGACCCTGGGCAAGATCTTCCTACTGTCCAGGCC +
Preference number: 1 (lower is better)
Translates to: RLRAKAEVCPRSPPE*RIQDPGQDLPTVQA
Trigger: GGCCTGGACAGTAGGAAGATCTTGCCCAGGGTCCTGGATCCGCCACTCTGGGGGTGACCTTGGACAAACCTCTGCCTTGGCCCTCAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp CCAAGGTTCAGAGGCACTGGTCCAGGACACACAGCAGCGGGGAAGTaGAACCCTCACTCCAGCCTGCAGTCTGGGCTCTGTCACTGTGCT +
Preference number: 1 (lower is better)
Translates to: PRFRGTGPGHTAAGK*NPHSSLQSGLCHCA
Trigger: AGCACAGTGACAGAGCCCAGACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCAGTGCCTCTGAACCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp AGAGGTTTGTCCAAGGTCACCCCCAGAGTGGCGGATCCAGGACCCTaGGCAAGATCTTCCTACTGTCCAGGCCTCTCCCCCACCTCTCTT +
Preference number: 1 (lower is better)
Translates to: RGLSKVTPRVADPGP*ARSSYCPGLSPTSL
Trigger: AAGAGAGGTGGGGGAGAGGCCTGGACAGTAGGAAGATCTTGCCCAGGGTCCTGGATCCGCCACTCTGGGGGTGACCTTGGACAAACCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp ACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCTaGGCTCTGTCACTGTGCTGTCTCTCCATCCTTCCCTCCCCACAA +
Preference number: 1 (lower is better)
Translates to: THSSGEVEPSLQPAV*ALSLCCLSILPSPQ
Trigger: TTGTGGGGAGGGAAGGATGGAGAGACAGCACAGTGACAGAGCCCAGACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 90 bp GTGCAAAAGGCTGACCGCACAGGACCTCCCGTGAGAACCCTACGCTaGAGAGCTCGTTCTCTTGGCTTCCAGGCCTTTTTATACGCTGTC +
Preference number: 1 (lower is better)
Translates to: VQKADRTGPPVRTLR*RARSLGFQAFLYAV
Trigger: GACAGCGTATAAAAAGGCCTGGAAGCCAAGAGAACGAGCTCTGCAGCGTAGGGTTCTCACGGGAGGTCCTGTGCGGTCAGCCTTTTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp CACAGGACCTCCCGTGAGAACCCTACGCTGCAGAGCTCGTTCTCTTaGCTTCCAGGCCTTTTTATACGCTGTCCTGCTGCTTGGACATGC +
Preference number: 1 (lower is better)
Translates to: HRTSRENPTLQSSFS*LPGLFIRCPAAWTC
Trigger: GCATGTCCAAGCAGCAGGACAGCGTATAAAAAGGCCTGGAAGCCAAGAGAACGAGCTCTGCAGCGTAGGGTTCTCACGGGAGGTCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp CCTGGGCCTCTGGCATTGTGGAGGCTGACCTATAGAGAACAGAGCTaGAGCTGGGGAGACATGAAGTCTGCACATCTAGACCCCAGTGAG +
Preference number: 1 (lower is better)
Translates to: PGPLALWRLTYREQS*SWGDMKSAHLDPSE
Trigger: CTCACTGGGGTCTAGATGTGCAGACTTCATGTCTCCCCAGCTCCAGCTCTGTTCTCTATAGGTCAGCCTCCACAATGCCAGAGGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp AAGATGTTAATATCCACTGCCCCAAGTGCCAAGGTTCAGAGGCACTaGTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAG +
Preference number: 1 (lower is better)
Translates to: KMLISTAPSAKVQRH*SRTHSSGEVEPSLQ
Trigger: CTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCAGTGCCTCTGAACCTTGGCACTTGGGGCAGTGGATATTAACATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 90 bp TCGGCTCTGAGAGCGGAGACCCAGCCTCCCAGCCTGGAGTTGTGGTaGATTCGCAAACAAGTCTCCATCTCCAGAACCTTCCTGAAGAAA +
Preference number: 1 (lower is better)
Translates to: SALRAETQPPSLELW*IRKQVSISRTFLKK
Trigger: TTTCTTCAGGAAGGTTCTGGAGATGGAGACTTGTTTGCGAATTCACCACAACTCCAGGCTGGGAGGCTGGGTCTCCGCTCTCAGAGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 90 bp ATCTCCAATCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTaGTGCCCCAAGAATTGGGCTTGGAAAGATGTTAATATCCACTGC +
Preference number: 1 (lower is better)
Translates to: ISNLRTCHLPEDRRP*CPKNWAWKDVNIHC
Trigger: GCAGTGGATATTAACATCTTTCCAAGCCCAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGATTGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 90 bp AGTCTCCATCTCCAGAACCTTCCTGAAGAAAACAGCTCTCCAGGCTaGGGCAAGAAGCCTGTCCCTACAGTGATACAACCACCCCTCAAT +
Preference number: 1 (lower is better)
Translates to: SLHLQNLPEENSSPG*GKKPVPTVIQPPLN
Trigger: ATTGAGGGGTGGTTGTATCACTGTAGGGACAGGCTTCTTGCCCCAGCCTGGAGAGCTGTTTTCTTCAGGAAGGTTCTGGAGATGGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 90 bp TCCAAGCCCAGCCCCCAGTGCATGCGACAGATGAGGCAGAGATTGTaGCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCT +
Preference number: 1 (lower is better)
Translates to: SKPSPQCMRQMRQRL*RTEINIYKVPVQRS
Trigger: AGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCACTGGGGGCTGGGCTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 90 bp AACTCACCTGACCATCCAAGCCCAGCCCCCAGTGCATGCGACAGATaGGGCAGAGATTGTGCCGTACAGAGATCAATATATATAAAGTGC +
Preference number: 1 (lower is better)
Translates to: NSPDHPSPAPSACDR*GRDCAVQRSIYIKC
Trigger: GCACTTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCACTGGGGGCTGGGCTTGGATGGTCAGGTGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 90 bp CTGGCATTTGGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATaGAATAGCCTGCAGCTATTAAGAAGCACGTGTGTGCAGGAAGCG +
Preference number: 1 (lower is better)
Translates to: LAFGNSHVNVSKFLS*NSLQLLRSTCVQEA
Trigger: CGCTTCCTGCACACACGTGCTTCTTAATAGCTGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCCAAATGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CAA 90 bp CACCCACTGGGGGCCACCAGGGAGCCCACCAAGCCCACTCCGGGCTaGGACAGAGGGCAGGCCTGGAGGAAGGCACATCCAACCCCACTG +
Preference number: 2 (lower is better)
Translates to: HPLGATREPTKPTPG*DRGQAWRKAHPTPL
Trigger: CAGTGGGGTTGGATGTGCCTTCCTCCAGGCCTGCCCTCTGTCCAAGCCCGGAGTGGGCTTGGTGGGCTCCCTGGTGGCCCCCAGTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR TCA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTTGCCTGGCCAGGCAATaGGTACCGGCGGCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPCLARQ*VPAAGS
Trigger: GCTGCCTGCCGCCGGTACTCATTGCCTGGCCAGGCA...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp AGTCAGCACGCAGAGCAAGGCCAGCGAGGCCCAGGCGCCAGGCCTTGGTCCCTGCCCAGCCTCCCAGCCTaGAGTTGTGGTGAATTCGCA +
Preference number: 2 (lower is better)
Translates to: SQHAEQGQRGPGARPWSLPSLPA*SCGEFA
Trigger: TGCGAATTCACCACAACTCCAGGCTGGGAGGCTGGG...CAGGGACCAAGGCCTGGCGCCTGGGCCTCGCTGGCCTTGCTCTGCGTGCTGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp AGTCAGCACGCAGAGCAAGGCCAGCGAGGCCCAGGCGCCAGGCCTTGGTCCCTGCTCCAGCCTGCAGTCTaGGCTCTGTCACTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: SQHAEQGQRGPGARPWSLLQPAV*ALSLCC
Trigger: ACAGCACAGTGACAGAGCCCAGACTGCAGGCTGGAG...CAGGGACCAAGGCCTGGCGCCTGGGCCTCGCTGGCCTTGCTCTGCGTGCTGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR TCA 90 bp TCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGCACTTGGAACTCACCTaGCCATCCAAGCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: SSGRPRPALHDQPGFFILHLELT*PSKPSP
Trigger: GGGGCTGGGCTTGGATGGTCAGGTGAGTTCCAAGTG...CAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR GCA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTCCTGCTGCTTGGACATaGCAGTCCCCACCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPPAAWT*QSPPLH
Trigger: GTGCAGGGGTGGGGACTGGCATGTCCAAGCAGCAGG...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp TCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGCCAAGGAGGAACTGGTaGTCAGAGTGGGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: SSGRPRPALHDQPGFFILPRRNW*SEWGGG
Trigger: TCCCCCACCCCACTCTGACCACCAGTTCCTCCTTGG...CAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR TCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGGCACAGGACCTCCCGTaGGAACCCTACGCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: SEDLPPPRGPEALMPQELAQDLP*EPYAAE
Trigger: CTCTGCAGCGTAGGGTTCTCACGGGAGGTCCTGTGC...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR GCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGCACCTACCGAGCTCCTaGGGCACTCAGCTGTCACCC +
Preference number: 2 (lower is better)
Translates to: SEDLPPPRGPEALMPQELHLPSS*GTQLSP
Trigger: GGGTGACAGCTGAGTGCCGCAGGAGCTCGGTAGGTG...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp TCTTCCTACTGTCCAGGCCTCTCCCCCACCTCTCTTGTGTGGCCCAGCACCCTGGGACAAATCCAGGCCTaGGTGGGCTGCCTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: SSYCPGLSPTSLVWPSTLGQIQA*VGCLSG
Trigger: CCCTGACAGGCAGCCCACCCAGGCCTGGATTTGTCC...CAGGGTGCTGGGCCACACAAGAGAGGTGGGGGAGAGGCCTGGACAGTAGGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp TGGTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCCCCACCTCTCTTGTGTaGCCCAGCACCCTGGACTCC +
Preference number: 2 (lower is better)
Translates to: WSRTHSSGEVEPSLQPAVPTSLV*PSTLDS
Trigger: GGAGTCCAGGGTGCTGGGCCACACAAGAGAGGTGGG...GACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR GCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGCCGGAGTCCACAGGGTaGAAAAGGCTGACCGCACAG +
Preference number: 2 (lower is better)
Translates to: SEDLPPPRGPEALMPQELPESTG*KRLTAQ
Trigger: CTGTGCGGTCAGCCTTTTGCACCCTGTGGACTCCGG...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGGACAGAGGGCAGGCCTaGAGGAAGGCACATCCAACC +
Preference number: 2 (lower is better)
Translates to: SEDLPPPRGPEALMPQELDRGQA*RKAHPT
Trigger: GGTTGGATGTGCCTTCCTCCAGGCCTGCCCTCTGTC...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR GCA 90 bp TCTTCCTACTGTCCAGGCCTCTCCCCCACCTCTCTTGTGTGGCCCAGCACCCTGTCCTGCCCACGTTGGTaGGGGTTGAATTTGACGGCC +
Preference number: 2 (lower is better)
Translates to: SSYCPGLSPTSLVWPSTLSCPRW*GLNLTA
Trigger: GGCCGTCAAATTCAACCCGCACCAACGTGGGCAGGA...CAGGGTGCTGGGCCACACAAGAGAGGTGGGGGAGAGGCCTGGACAGTAGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR TCA 90 bp TCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGAGCCTGGAGTTGTGGTaGATTCGCAAACAAGTCTCC +
Preference number: 2 (lower is better)
Translates to: SSGRPRPALHDQPGFFILSLELW*IRKQVS
Trigger: GGAGACTTGTTTGCGAATTCACCACAACTCCAGGCT...CAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR GCA 90 bp CGAGGCTCTAGATCAAGGTGGGAGGTTAGTCCTCACTCCCTTCAGGGGCTGGACAAGCCCAGCCCCCAGTaGATGCGACAGATGAGGCAG +
Preference number: 2 (lower is better)
Translates to: RGSRSRWEVSPHSLQGLDKPSPQ*MRQMRQ
Trigger: CTGCCTCATCTGTCGCATGCACTGGGGGCTGGGCTT...GTCCAGCCCCTGAAGGGAGTGAGGACTAACCTCCCACCTTGATCTAGAGCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR GCA 90 bp AGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATTTGTTGTAAACAGCCACCGCGGGCCTaGCAGCCCTGTGTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: RERRGRETTQTLEGICCKQPPRA*QPCVPS
Trigger: GGAGGGCACACAGGGCTGGCAGGCCCGCGGTGGCTG...TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGGCTCTAGATCAAGGTaGGAGGTTAGTCCTCACTCC +
Preference number: 2 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPGSRSR*EVSPHS
Trigger: GGAGTGAGGACTAACCTCCCACCTTGATCTAGAGCC...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp TCTTCCTACTGTCCAGGCCTCTCCCCCACCTCTCTTGTGTGGCCCAGCACCCTGGTGGTCAGAGTGGGGTaGGGGATACCCGGTACAATT +
Preference number: 2 (lower is better)
Translates to: SSYCPGLSPTSLVWPSTLVVRVG*GIPGTI
Trigger: AATTGTACCGGGTATCCCCCACCCCACTCTGACCAC...CAGGGTGCTGGGCCACACAAGAGAGGTGGGGGAGAGGCCTGGACAGTAGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR TCA 90 bp GAACTGGTGGTCAGAGTGGGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCCAGGGTGCAAAAGGCTaGCCGCACAGGACCTCCCGT +
Preference number: 2 (lower is better)
Translates to: ELVVRVGWGIPGTICSCLQGAKG*PHRTSR
Trigger: ACGGGAGGTCCTGTGCGGTCAGCCTTTTGCACCCTG...GAGGCATGAACAAATTGTACCGGGTATCCCCCACCCCACTCTGACCACCAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR GCA 90 bp TGGTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCGGTACAATTTGTTCATaGCTCAACACCAGCCACCGC +
Preference number: 2 (lower is better)
Translates to: WSRTHSSGEVEPSLQPAVGTICS*LNTSHR
Trigger: GCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACC...GACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR TCA 90 bp AGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATTTGTTGTAAACTGGTGTCTCGGCTCTaGGAGCGGAGACCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RERRGRETTQTLEGICCKLVSRL*ERRPSL
Trigger: GAGGCTGGGTCTCCGCTCTCAGAGCCGAGACACCAG...TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp AGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATTTGTTGTAAAGATCTAGGAGGGACGTaGAGGGGGCTAGCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: RERRGRETTQTLEGICCKDLGGT*RGLALG
Trigger: GCCCAGGGCTAGCCCCCTCCACGTCCCTCCTAGATC...TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR GCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTACACTGTGGCCCTCCTaGCCACGTTGGTGCGGGTTG +
Preference number: 2 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVTLWPS*PRWCGL
Trigger: CAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGT...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTAGCCTGTGTCCTGCCTaGCCAGGCAATGAGTACCGG +
Preference number: 2 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVSLCPA*PGNEYR
Trigger: CCGGTACTCATTGCCTGGCCAGGCAGGACACAGGCT...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CAA 90 bp CCATCCAAGCCCAGCCCCCAGTGCATGCGACAGATGAGGCAGAGATaGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGC +
Preference number: 2 (lower is better)
Translates to: PSKPSPQCMRQMRQR*CRTEINIYKVPVQR
Trigger: GCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCACTGGGGGCTGGGCTTGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR GCA 90 bp GGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTAGGCCCGAGCCCAGCTaGACCCAGAAAACCTGCCAC +
Preference number: 2 (lower is better)
Translates to: GVKRNKFSTCDQQLVIVVRPEPS*TQKTCH
Trigger: GTGGCAGGTTTTCTGGGTGCAGCTGGGCTCGGGCCT...AACCACTATGACCAGCTGCTGATCACAAGTAGAGAACTTGTTTCTTTTCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp AGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATTTGTTGTAAAAGGAGCAGCAAGACCTaGTGCCCATTAGTCATGGGG +
Preference number: 2 (lower is better)
Translates to: RERRGRETTQTLEGICCKRSSKT*CPLVMG
Trigger: CCCCATGACTAATGGGCACCAGGTCTTGCTGCTCCT...TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp AGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATTTGTTGTAAAAAGGTTCAGAGGCACTaGTCCAGGACACACAGCAGC +
Preference number: 2 (lower is better)
Translates to: RERRGRETTQTLEGICCKKVQRH*SRTHSS
Trigger: GCTGCTGTGTGTCCTGGACCAGTGCCTCTGAACCTT...TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR TCA 90 bp GAACTGGTGGTCAGAGTGGGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCGCCGGTACAACGCTCTaGAAAATAGTTTTGTCCCAA +
Preference number: 2 (lower is better)
Translates to: ELVVRVGWGIPGTICSCLAGTTL*KIVLSQ
Trigger: TTGGGACAAAACTATTTTTCAGAGCGTTGTACCGGC...GAGGCATGAACAAATTGTACCGGGTATCCCCCACCCCACTCTGACCACCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp GGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTCCTGGCTATCCTCCCTaGTGTCTCGGCTCTGAGAGC +
Preference number: 2 (lower is better)
Translates to: GVKRNKFSTCDQQLVIVVPGYPP*CLGSES
Trigger: GCTCTCAGAGCCGAGACACCAGGGAGGATAGCCAGG...AACCACTATGACCAGCTGCTGATCACAAGTAGAGAACTTGTTTCTTTTCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CCA 90 bp AGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATTTGTTGTAAAACTCCACGACCAGCCTaGGTTCTTCATCCTGGTAAC +
Preference number: 2 (lower is better)
Translates to: RERRGRETTQTLEGICCKTPRPA*VLHPGN
Trigger: GTTACCAGGATGAAGAACCCAGGCTGGTCGTGGAGT...TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR TCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTTTCATCCTGGTAACCTaGCAATGGATTTCGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVFILVT*QWISWG
Trigger: GCCCCACGAAATCCATTGTCAGGTTACCAGGATGAA...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR TCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTAGTAACACCTCAATCTaGAAAGTATCAGGGCAACAC +
Preference number: 2 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVSNTSI*KVSGQH
Trigger: GTGTTGCCCTGATACTTTTCAGATTGAGGTGTTACT...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR GCA 90 bp GAACTGGTGGTCAGAGTGGGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCTCAATATATATAAAGTaGCGGTACAACGCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: ELVVRVGWGIPGTICSCLSIYIK*RYNALK
Trigger: TTTCAGAGCGTTGTACCGGCACTTTATATATATTGA...GAGGCATGAACAAATTGTACCGGGTATCCCCCACCCCACTCTGACCACCAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR TCA 90 bp AGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATTTGTTGTAAAGTTATCAAGGCTGGTTaGGTCAAATATCACAAAGTA +
Preference number: 2 (lower is better)
Translates to: RERRGRETTQTLEGICCKVIKAG*VKYHKV
Trigger: TACTTTGTGATATTTGACTCAACCAGCCTTGATAAC...TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR GCA 90 bp GGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTATGAGGCAGAGATTGTaGCGTACAGAGATCAATATA +
Preference number: 2 (lower is better)
Translates to: GVKRNKFSTCDQQLVIVVMRQRL*RTEINI
Trigger: TATATTGATCTCTGTACGGCACAATCTCTGCCTCAT...AACCACTATGACCAGCTGCTGATCACAAGTAGAGAACTTGTTTCTTTTCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 72 bp GGCTCCCCGGGCCCAGCCCCTAAGAACCACGGCAGCTaGGCCAGGCCACTCCTGTCTCCACTTCCATACCCT +
Preference number: 3 (lower is better)
Translates to: GSPGPAPKNHGS*ARPLLSPLPYP
Trigger: AGGGTATGGAAGTGGAGACAGGAGTGGCCTGGCGCAGCTGCCGTGGTTCTTAGGGGCTGGGCCCGGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 72 bp CCCTCCCTGGCCCGGAGTCCACAGGGTGCAAAAGGCTaGCCGCACAGGACCTCCCGTGAGAACCCTACGCTG +
Preference number: 3 (lower is better)
Translates to: PSLARSPQGAKG*PHRTSRENPTL
Trigger: CAGCGTAGGGTTCTCACGGGAGGTCCTGTGCGGTCAGCCTTTTGCACCCTGTGGACTCCGGGCCAGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CAA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGAAGCCCACTCCGGGCTaGGACAGAGGGCAGGCCTGG +
Preference number: 3 (lower is better)
Translates to: SEDLPPPRGPEALMPQELKPTPG*DRGQAW
Trigger: CCAGGCCTGCCCTCTGTCCAAGCCCGGAGTGGGCTT...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 72 bp GCTGTCCTGCTGCTTGGACATGCCAGTCCCCACCCCTaGACCTACCGAGCTCCTGCGGCACTCAGCTGTCAC +
Preference number: 3 (lower is better)
Translates to: AVLLLGHASPHP*TYRAPAALSCH
Trigger: GTGACAGCTGAGTGCCGCAGGAGCTCGGTAGGTGCAGGGGTGGGGACTGGCATGTCCAAGCAGCAGGACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 72 bp AATTTGTTCATGCCTCAACACCAGCCACCGCGGGCCTaGCAGCCCTGTGTGCCCTCCCTGGCCCGGAGTCCA +
Preference number: 3 (lower is better)
Translates to: NLFMPQHQPPRA*QPCVPSLARSP
Trigger: TGGACTCCGGGCCAGGGAGGGCACACAGGGCTGGCAGGCCCGCGGTGGCTGGTGTTGAGGCATGAACAAATT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp CAGAATTCCCAGGCAGGGCAGCCTGGCTATCCTCCCTaGTGTCTCGGCTCTGAGAGCGGAGACCCAGCCTCC +
Preference number: 3 (lower is better)
Translates to: QNSQAGQPGYPP*CLGSESGDPAS
Trigger: GGAGGCTGGGTCTCCGCTCTCAGAGCCGAGACACCAGGGAGGATAGCCAGGCTGCCCTGCCTGGGAATTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp GGCCCGAGCCCAGCTGCACCCAGAAAACCTGCCACTTaGAACTCACCTGACCATCCAAGCCCAGCCCCCAGT +
Preference number: 3 (lower is better)
Translates to: GPSPAAPRKPAT*NSPDHPSPAPS
Trigger: ACTGGGGGCTGGGCTTGGATGGTCAGGTGAGTTCCAAGTGGCAGGTTTTCTGGGTGCAGCTGGGCTCGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CAA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTCCTGGGCCTCTGGCATaGTGGAGGCTGACCTATAGA +
Preference number: 3 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPPGPLA*WRLTYR
Trigger: TCTATAGGTCAGCCTCCACAATGCCAGAGGCCCAGG...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 72 bp CCTGGCAGGACACTGTGGCCCTCCTGCCCACGTTGGTaGGGGTTGAATTTGACGGCCCAGCAGAATTCCCAG +
Preference number: 3 (lower is better)
Translates to: PGRTLWPSCPRW*GLNLTAQQNSQ
Trigger: CTGGGAATTCTGCTGGGCCGTCAAATTCAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGTCCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp GCTCCTGGCAGGACACTGTGGCCCTCCTGCCCACGTTaGTGCGGGTTGAATTTGACGGCCCAGCAGAATTCC +
Preference number: 3 (lower is better)
Translates to: APGRTLWPSCPR*CGLNLTAQQNS
Trigger: GGAATTCTGCTGGGCCGTCAAATTCAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGTCCTGCCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp AGAGGCACTGGTCCAGGACACACAGCAGCGGGGAAGTaGAACCCTCACTCCAGCCTGCAGTCTGGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: RGTGPGHTAAGK*NPHSSLQSGLC
Trigger: ACAGAGCCCAGACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCAGTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 72 bp CCGCCCTACTGGGGAAGCCGGTCCGTACGTAGGCCTTaGATCTCGCCACCTCCACTTCTGTCCTCAAGAACA +
Preference number: 3 (lower is better)
Translates to: PPYWGSRSVRRP*ISPPPLLSSRT
Trigger: TGTTCTTGAGGACAGAAGTGGAGGTGGCGAGATGCAAGGCCTACGTACGGACCGGCTTCCCCAGTAGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp CTGGGACGCACACCTGTCCGAGGCTCTAGATCAAGGTaGGAGGTTAGTCCTCACTCCCTTCAGGGGCTGGAC +
Preference number: 3 (lower is better)
Translates to: LGRTPVRGSRSR*EVSPHSLQGLD
Trigger: GTCCAGCCCCTGAAGGGAGTGAGGACTAACCTCCCACCTTGATCTAGAGCCTCGGACAGGTGTGCGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp AGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCTaGGCTCTGTCACTGTGCTGTCTCTCCATCCTTCCC +
Preference number: 3 (lower is better)
Translates to: SGEVEPSLQPAV*ALSLCCLSILP
Trigger: GGGAAGGATGGAGAGACAGCACAGTGACAGAGCCCAGACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 72 bp AGCTGCACCCAGAAAACCTGCCACTTGGAACTCACCTaGCCATCCAAGCCCAGCCCCCAGTGCATGCGACAG +
Preference number: 3 (lower is better)
Translates to: SCTQKTCHLELT*PSKPSPQCMRQ
Trigger: CTGTCGCATGCACTGGGGGCTGGGCTTGGATGGTCAGGTGAGTTCCAAGTGGCAGGTTTTCTGGGTGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 72 bp ACAGGGTGCAAAAGGCTGACCGCACAGGACCTCCCGTaGGAACCCTACGCTGCAGAGCTCGTTCTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: TGCKRLTAQDLP*EPYAAELVLLA
Trigger: AGCCAAGAGAACGAGCTCTGCAGCGTAGGGTTCTCACGGGAGGTCCTGTGCGGTCAGCCTTTTGCACCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp GCCAAGGCAGAGGTTTGTCCAAGGTCACCCCCAGAGTaGCGGATCCAGGACCCTGGGCAAGATCTTCCTACT +
Preference number: 3 (lower is better)
Translates to: AKAEVCPRSPPE*RIQDPGQDLPT
Trigger: AGTAGGAAGATCTTGCCCAGGGTCCTGGATCCGCCACTCTGGGGGTGACCTTGGACAAACCTCTGCCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp ATATCCACTGCCCCAAGTGCCAAGGTTCAGAGGCACTaGTCCAGGACACACAGCAGCGGGGAAGTGGAACCC +
Preference number: 3 (lower is better)
Translates to: ISTAPSAKVQRH*SRTHSSGEVEP
Trigger: GGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCAGTGCCTCTGAACCTTGGCACTTGGGGCAGTGGATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp TTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTaGGTTCTTCATCCTGGTAACCTGACAATGGATTTC +
Preference number: 3 (lower is better)
Translates to: FRQAPPCTPRPA*VLHPGNLTMDF
Trigger: GAAATCCATTGTCAGGTTACCAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp GCGGTGGGGCGCTTGAGACAGTGTTTCCCTGCATCGTaGCCGGACCTCTCTACTCAATCCCCAGTGTTCTAC +
Preference number: 3 (lower is better)
Translates to: AVGRLRQCFPAS*PDLSTQSPVFY
Trigger: GTAGAACACTGGGGATTGAGTAGAGAGGTCCGGCCACGATGCAGGGAAACACTGTCTCAAGCGCCCCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CAA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGCAGAGCTCGTTCTCTaGGCTTCCAGGCCTTTTTAT +
Preference number: 3 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPAELVL*ASRPFY
Trigger: ATAAAAAGGCCTGGAAGCCAAGAGAACGAGCTCTGC...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 72 bp CAGATGACGCACTCAGTCAGCGCCTTTACTTGTACGTaGGCGCTTAGGGGCCCTGTCTCTGGGGACCATGTG +
Preference number: 3 (lower is better)
Translates to: QMTHSVSAFTCT*ALRGPVSGDHV
Trigger: CACATGGTCCCCAGAGACAGGGCCCCTAAGCGCTCACGTACAAGTAAAGGCGCTGACTGAGTGCGTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 72 bp GCTGACCGCACAGGACCTCCCGTGAGAACCCTACGCTaGAGAGCTCGTTCTCTTGGCTTCCAGGCCTTTTTA +
Preference number: 3 (lower is better)
Translates to: ADRTGPPVRTLR*RARSLGFQAFL
Trigger: TAAAAAGGCCTGGAAGCCAAGAGAACGAGCTCTGCAGCGTAGGGTTCTCACGGGAGGTCCTGTGCGGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CAA 90 bp TGGTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCCAGATGAGGCAGAGATaGTGCCGTACAGAGATCAAT +
Preference number: 3 (lower is better)
Translates to: WSRTHSSGEVEPSLQPAVQMRQR*CRTEIN
Trigger: ATTGATCTCTGTACGGCACAATCTCTGCCTCATCTG...GACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CAA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGGATACCCGGTACAATTaGTTCATGCCTCAACACCAG +
Preference number: 3 (lower is better)
Translates to: SEDLPPPRGPEALMPQELDTRYN*FMPQHQ
Trigger: CTGGTGTTGAGGCATGAACAAATTGTACCGGGTATC...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 72 bp CTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTaGTGCCCCAAGAATTGGGCTTGGAAAGATGTTAAT +
Preference number: 3 (lower is better)
Translates to: LRTCHLPEDRRP*CPKNWAWKDVN
Trigger: ATTAACATCTTTCCAAGCCCAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 72 bp CCCAAATCGATGACATCAGGAGCTAATGGCCCAGGCTaGCCTCCTGCTGCAGTGCCCATAATTCTTCCGGCA +
Preference number: 3 (lower is better)
Translates to: PKSMTSGANGPG*PPAAVPIILPA
Trigger: TGCCGGAAGAATTATGGGCACTGCAGCAGGAGGGCAGCCTGGGCCATTAGCTCCTGATGTCATCGATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 72 bp GACCATCCAAGCCCAGCCCCCAGTGCATGCGACAGATaGGGCAGAGATTGTGCCGTACAGAGATCAATATAT +
Preference number: 3 (lower is better)
Translates to: DHPSPAPSACDR*GRDCAVQRSIY
Trigger: ATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCACTGGGGGCTGGGCTTGGATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CAA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTTGGTGCGGGTTGAATTaGACGGCCCAGCAGAATTCC +
Preference number: 3 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVWCGLN*TAQQNS
Trigger: GGAATTCTGCTGGGCCGTCAAATTCAACCCGCACCA...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 72 bp CCCAAGAATTGGGCTTGGAAAGATGTTAATATCCACTaGCCCAAGTGCCAAGGTTCAGAGGCACTGGTCCAG +
Preference number: 3 (lower is better)
Translates to: PKNWAWKDVNIH*PKCQGSEALVQ
Trigger: CTGGACCAGTGCCTCTGAACCTTGGCACTTGGGGCAGTGGATATTAACATCTTTCCAAGCCCAATTCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CAA 90 bp GGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTTCTCACTGCTGGCTTTaGATGAGCCCAGGAGGGCTC +
Preference number: 3 (lower is better)
Translates to: GVKRNKFSTCDQQLVIVVSHCWL*MSPGGL
Trigger: GAGCCCTCCTGGGCTCATCAAAAGCCAGCAGTGAGA...AACCACTATGACCAGCTGCTGATCACAAGTAGAGAACTTGTTTCTTTTCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp GAAACAGGAGTCACATCCTTTTCAGGGCTGGTAGGGTaGCTGAAGATGGCCCAAAACCTCCTGAATGGAAAA +
Preference number: 3 (lower is better)
Translates to: ETGVTSFSGLVG*LKMAQNLLNGK
Trigger: TTTTCCATTCAGGAGGTTTTGGGCCATCTTCAGCCACCCTACCAGCCCTGAAAAGGATGTGACTCCTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 72 bp AGCCCCCAGTGCATGCGACAGATGAGGCAGAGATTGTaGCGTACAGAGATCAATATATATAAAGTGCCGGTA +
Preference number: 3 (lower is better)
Translates to: SPQCMRQMRQRL*RTEINIYKVPV
Trigger: TACCGGCACTTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCACTGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 72 bp AAAGAAACATATGCCAGAATGCTAGCAGTGCTTGTATaGGTGCAGATGACGCACTCAGTCAGCGCCTTTACT +
Preference number: 3 (lower is better)
Translates to: KETYARMLAVLV*VQMTHSVSAFT
Trigger: AGTAAAGGCGCTGACTGAGTGCGTCATCTGCACGCATACAAGCACTGCTAGCATTCTGGCATATGTTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR-3UTR CAA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTTACGGAATTTTAAAGTaGGTGAGGAAGTCGACAGAA +
Preference number: 3 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVYGILK*VRKSTE
Trigger: TTCTGTCGACTTCCTCACCAACTTTAAAATTCCGTA...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR TCA 72 bp GGGAACAGCCATGTTAACGTGAGCAAATTCCTCTCATaGAATAGCCTGCAGCTATTAAGAAGCACGTGTGTG +
Preference number: 3 (lower is better)
Translates to: GNSHVNVSKFLS*NSLQLLRSTCV
Trigger: CACACACGTGCTTCTTAATAGCTGCAGGCTATTTCATGAGAGGAATTTGCTCACGTTAACATGGCTGTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp AAAGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTaGAGGGTATTTGTTGTAAACTTCAAACTTTTGGCA +
Preference number: 3 (lower is better)
Translates to: KGREGGGRQPKR*RVFVVNFKLLA
Trigger: TGCCAAAAGTTTGAAGTTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CCA 72 bp TCTACTTGTGATCAGCAGCTGGTCATAGTGGTTGCCTaGAGTATATGCCTTTTTGTATCCTTTGAATTTCCA +
Preference number: 3 (lower is better)
Translates to: STCDQQLVIVVA*SICLFVSFEFP
Trigger: TGGAAATTCAAAGGATACAAAAAGGCATATACTCCAGGCAACCACTATGACCAGCTGCTGATCACAAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR GCA 72 bp AGAGATTGTGCCGTACAGAGATCAATATATATAAAGTaGCGGTACAACGCTCTGAAAAATAGTTTTGTCCCA +
Preference number: 3 (lower is better)
Translates to: RDCAVQRSIYIK*RYNALKNSFVP
Trigger: TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAATCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGCCACGTGCAGCGACGTaGCACCGCCCTCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: SSGRPRPALHDQPGFFILPRAAT*HRPPRG
Trigger: GCCGCGTGGAGGGCGGTGGCACGTCGCTGCACGTGG...CAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGCCGCGCTCGTCCCAGTaGAAGGCCTCGCTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SSGRPRPALHDQPGFFILPRSSQ*KASLAR
Trigger: GCGCGCCAGCGAGGCCTTCCACTGGGACGAGCGCGG...CAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp TGGTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCGCAGCTCGAGAGGCGTaGGGCCGCCGCCGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: WSRTHSSGEVEPSLQPAVAAREA*GRRRPA
Trigger: TGCGGGACGGCGGCGGCCTCACGCCTCTCGAGCTGC...GACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp AGTCAGCACGCAGAGCAAGGCCAGCGAGGCCCAGGCGCCAGGCCTTGGTCCCTGCGGCCCTCCCAGTCCTaGAAGCTCATGGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: SQHAEQGQRGPGARPWSLRPSQS*KLMART
Trigger: CGTCCTGGCCATGAGCTTGCAGGACTGGGAGGGCCG...CAGGGACCAAGGCCTGGCGCCTGGGCCTCGCTGGCCTTGCTCTGCGTGCTGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp AGTCAGCACGCAGAGCAAGGCCAGCGAGGCCCAGGCGCCAGGCCTTGGTCCCTGCACCTACCGAGCTCCTaGGGCACTCAGCTGTCACCC +
Preference number: 4 (lower is better)
Translates to: SQHAEQGQRGPGARPWSLHLPSS*GTQLSP
Trigger: GGGTGACAGCTGAGTGCCGCAGGAGCTCGGTAGGTG...CAGGGACCAAGGCCTGGCGCCTGGGCCTCGCTGGCCTTGCTCTGCGTGCTGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp AGTCAGCACGCAGAGCAAGGCCAGCGAGGCCCAGGCGCCAGGCCTTGGTCCCTGCCTGCTGCTTGGACATaGCAGTCCCCACCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SQHAEQGQRGPGARPWSLPAAWT*QSPPLH
Trigger: GTGCAGGGGTGGGGACTGGCATGTCCAAGCAGCAGG...CAGGGACCAAGGCCTGGCGCCTGGGCCTCGCTGGCCTTGCTCTGCGTGCTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGCGGTGACCAGCACCTaGATGGCGCGCGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPAVTST*MARAKS
Trigger: GCTCTTCGCGCGCGCCATGCAGGTGCTGGTCACCGC...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp TCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGGAGGACCGGAGGCCCTaGTGCCCCAAGAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSGRPRPALHDQPGFFILEDRRP*CPKNWA
Trigger: AGCCCAATTCTTGGGGCATCAGGGCCTCCGGTCCTC...CAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACCTCACCGCGCCAGCGTaGAGTTCCCGGGCATGGTCA +
Preference number: 4 (lower is better)
Translates to: LQGLDSELKARAQLHPENLTAPA*SSRAWS
Trigger: TGACCATGCCCGGGAACTTCACGCTGGCGCGGTGAG...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp GATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGCCTGCCAGGCGCGTCCCACGGCATaGTGGCGGCGGGGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: DTRYNLFMPQHQPPRACQARPTA*WRRGVP
Trigger: AGGAACGCCCCGCCGCCAGCATGCCGTGGGACGCGC...CTGGCAGGCCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACGCAAGGTGCGCAGGATaGGGCGCAGAATGCCCACGC +
Preference number: 4 (lower is better)
Translates to: LQGLDSELKARAQLHPENARCAG*GAECPR
Trigger: GCGTGGGCATTCTGCGCCGCATCCTGCGCACCTTGC...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGATCCAGCGCCTAGGGTaGTCCGGGCCTAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SSGRPRPALHDQPGFFILIQRLG*SGPSLC
Trigger: GCAAAGGCTAGGCCCGGAGCACCCTAGGCGCTGGAT...CAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TCTTCCTACTGTCCAGGCCTCTCCCCCACCTCTCTTGTGTGGCCCAGCACCCTGCGCGCCGCGGGAACGTaGCCAGCAGGTAATGCGCGT +
Preference number: 4 (lower is better)
Translates to: SSYCPGLSPTSLVWPSTLRAAGT*PAGNAR
Trigger: ACGCGCATTACCTGCTGGCCACGTTCCCGCGGCGCG...CAGGGTGCTGGGCCACACAAGAGAGGTGGGGGAGAGGCCTGGACAGTAGGAAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGCTCGGGGAAGCGGCCTaGAGAGATGGCGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: SEDLPPPRGPEALMPQELLGEAA*RDGGDQ
Trigger: CTGGTCACCGCCATCTCTCCAGGCCGCTTCCCCGAG...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGCAACGGCTGCAGGAATaGGGGCAGCGGCAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: SEDLPPPRGPEALMPQELQRLQE*GQRQLV
Trigger: GACGAGCTGCCGCTGCCCCCATTCCTGCAGCCGTTG...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGAGCCCACTCCGGGCTTaGACAGAGGGCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SEDLPPPRGPEALMPQELSPLRA*TEGRPG
Trigger: TCCAGGCCTGCCCTCTGTCCAAGCCCGGAGTGGGCT...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGAGGTCACCCCCAGAGTaGCGGATCCAGGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: SEDLPPPRGPEALMPQELRSPPE*RIQDPG
Trigger: CCCAGGGTCCTGGATCCGCCACTCTGGGGGTGACCT...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TGGTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCGGCCCTTGGGAACACTaGGCACCTGGTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: WSRTHSSGEVEPSLQPAVGPWEH*APGGWV
Trigger: CACCCACCCACCAGGTGCCCAGTGTTCCCAAGGGCC...GACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TGGTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCTTGGCGCCGCCCTACTaGGGAAGCCGGTCCGTACGT +
Preference number: 4 (lower is better)
Translates to: WSRTHSSGEVEPSLQPAVLAPPY*GSRSVR
Trigger: ACGTACGGACCGGCTTCCCCAGTAGGGCGGCGCCAA...GACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CAA 72 bp CTGTGGCCCTCCTGCCCACGTTGGTGCGGGTTGAATTaGACGGCCCAGCAGAATTCCCAGGCAGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LWPSCPRWCGLN*TAQQNSQAGQP
Trigger: AGGCTGCCCTGCCTGGGAATTCTGCTGGGCCGTCAAATTCAACCCGCACCAACGTGGGCAGGAGGGCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp GGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGCTGGTGTCTCGGCTCTaGGAGCGGAGACCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GWGIPGTICSCLNTSHRGLVSRL*ERRPSL
Trigger: GAGGCTGGGTCTCCGCTCTCAGAGCCGAGACACCAG...CCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATCCCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTAGGCGAACGACGACTTaGGGCACTGCTTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPRRTTT*GTASAL
Trigger: GAGCGCAGAAGCAGTGCCGCAAGTCGTCGTTCGCCT...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TGGTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCGGATGCGGCGCAGAATaGCCACGCGGTTGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: WSRTHSSGEVEPSLQPAVGCGAE*PRGCSA
Trigger: TGCGCTACAACCGCGTGGGCATTCTGCGCCGCATCC...GACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TCTTCCTACTGTCCAGGCCTCTCCCCCACCTCTCTTGTGTGGCCCAGCACCCTGAGGCCCGAGCCCAGCTaGACCCAGAAAACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SSYCPGLSPTSLVWPSTLRPEPS*TQKTCH
Trigger: GTGGCAGGTTTTCTGGGTGCAGCTGGGCTCGGGCCT...CAGGGTGCTGGGCCACACAAGAGAGGTGGGGGAGAGGCCTGGACAGTAGGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp GAACTGGTGGTCAGAGTGGGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCCGGCAGGCCCCGCCCTaGACTCCACGACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ELVVRVGWGIPGTICSCLRQAPP*TPRPAW
Trigger: CCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCG...GAGGCATGAACAAATTGTACCGGGTATCCCCCACCCCACTCTGACCACCAGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGTCGCCCAGGCTGGAGTaGAATGGCGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSGRPRPALHDQPGFFILSPRLE*NGAILA
Trigger: AGCCAAGATTGCGCCATTGCACTCCAGCCTGGGCGA...CAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp GAACTGGTGGTCAGAGTGGGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCCGTCCCACGGCATGCTaGCGGCGGGGCGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ELVVRVGWGIPGTICSCLRPTAC*RRGVPG
Trigger: CCCAGGAACGCCCCGCCGCCAGCATGCCGTGGGACG...GAGGCATGAACAAATTGTACCGGGTATCCCCCACCCCACTCTGACCACCAGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACAGTGGAAGGCCTCGCTaGCGCGCATATCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LQGLDSELKARAQLHPENSGRPR*RAYPPA
Trigger: TGCTGGAGGATATGCGCGCCAGCGAGGCCTTCCACT...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGGGACAAATCCAGGCCTaGGTGGGCTGCCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SEDLPPPRGPEALMPQELGQIQA*VGCLSG
Trigger: CCCTGACAGGCAGCCCACCCAGGCCTGGATTTGTCC...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACACAGCAGCGGGGAAGTaGAACCCTCACTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LQGLDSELKARAQLHPENTAAGK*NPHSSL
Trigger: CAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGT...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp AGTCAGCACGCAGAGCAAGGCCAGCGAGGCCCAGGCGCCAGGCCTTGGTCCCTGTCTCCAGAACCTTCCTaGAGAAAACAGCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SQHAEQGQRGPGARPWSLSPEPS*RKQLSR
Trigger: CCTGGAGAGCTGTTTTCTTCAGGAAGGTTCTGGAGA...CAGGGACCAAGGCCTGGCGCCTGGGCCTCGCTGGCCTTGCTCTGCGTGCTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp AGTCAGCACGCAGAGCAAGGCCAGCGAGGCCCAGGCGCCAGGCCTTGGTCCCTGAGCCTGGAGTTGTGGTaGATTCGCAAACAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SQHAEQGQRGPGARPWSLSLELW*IRKQVS
Trigger: GGAGACTTGTTTGCGAATTCACCACAACTCCAGGCT...CAGGGACCAAGGCCTGGCGCCTGGGCCTCGCTGGCCTTGCTCTGCGTGCTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACGGGGTGCAGAGATGCTaGCGCCTGAATAAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LQGLDSELKARAQLHPENGVQRC*RLNKVG
Trigger: CCCAACCTTATTCAGGCGTCAGCATCTCTGCACCCC...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TCTTCCTACTGTCCAGGCCTCTCCCCCACCTCTCTTGTGTGGCCCAGCACCCTGCCGGAGTCCACAGGGTaGAAAAGGCTGACCGCACAG +
Preference number: 4 (lower is better)
Translates to: SSYCPGLSPTSLVWPSTLPESTG*KRLTAQ
Trigger: CTGTGCGGTCAGCCTTTTGCACCCTGTGGACTCCGG...CAGGGTGCTGGGCCACACAAGAGAGGTGGGGGAGAGGCCTGGACAGTAGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACACCCTCACTCCAGCCTaGAGTCTGGGCTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: LQGLDSELKARAQLHPENTLTPA*SLGSVT
Trigger: AGTGACAGAGCCCAGACTGCAGGCTGGAGTGAGGGT...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGAGGGCCTCCCTCGGCTaGTTATCTGCCCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: SEDLPPPRGPEALMPQELRASLG*LSAQHL
Trigger: AAGGTGCTGGGCAGATAAGCAGCCGAGGGAGGCCCT...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACCCAGACAGCACGGACTaGCCTACAAGGTCACCTCAG +
Preference number: 4 (lower is better)
Translates to: LQGLDSELKARAQLHPENPDSTD*PTRSPQ
Trigger: CTGAGGTGACCTTGTAGGGCAGTCCGTGCTGTCTGG...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTCTCCAGCCTGCAGTCTaGGCTCTGTCACTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPLQPAV*ALSLCC
Trigger: ACAGCACAGTGACAGAGCCCAGACTGCAGGCTGGAG...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CAA 72 bp GGTGGTCAGAGTGGGGTGGGGGATACCCGGTACAATTaGTTCATGCCTCAACACCAGCCACCGCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GGQSGVGDTRYN*FMPQHQPPRAC
Trigger: GCAGGCCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATCCCCCACCCCACTCTGACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CAA 72 bp AGGACACTGTGGCCCTCCTGCCCACGTTGGTGCGGGTaGAATTTGACGGCCCAGCAGAATTCCCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RTLWPSCPRWCG*NLTAQQNSQAG
Trigger: CCCTGCCTGGGAATTCTGCTGGGCCGTCAAATTCAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp GATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGCCTGCCAGCAGGGTGCAAAAGGCTaGCCGCACAGGACCTCCCGT +
Preference number: 4 (lower is better)
Translates to: DTRYNLFMPQHQPPRACQQGAKG*PHRTSR
Trigger: ACGGGAGGTCCTGTGCGGTCAGCCTTTTGCACCCTG...CTGGCAGGCCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp TCTTCCTACTGTCCAGGCCTCTCCCCCACCTCTCTTGTGTGGCCCAGCACCCTGGCCTGTCAGGGGGAGTaGTATCCAAGGAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: SSYCPGLSPTSLVWPSTLACQGE*YPRRNW
Trigger: CCAGTTCCTCCTTGGATATCACTCCCCCTGACAGGC...CAGGGTGCTGGGCCACACAAGAGAGGTGGGGGAGAGGCCTGGACAGTAGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp GAACTGGTGGTCAGAGTGGGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCTGCCTGGCCAGGCAATaGGTACCGGCGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ELVVRVGWGIPGTICSCLCLARQ*VPAAGS
Trigger: GCTGCCTGCCGCCGGTACTCATTGCCTGGCCAGGCA...GAGGCATGAACAAATTGTACCGGGTATCCCCCACCCCACTCTGACCACCAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACTCTGCGTGGAGCGATTaGCTTTGGGAAGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: LQGLDSELKARAQLHPENSAWSD*LWEATK
Trigger: CTTGGTGGCTTCCCAAAGGCAATCGCTCCACGCAGA...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TGCTCCTGGCAGGACACTGTGGCCCTCCTGCCCACGTTGGTGCGGGTTGAATTTCCAAGGAGGAACTGGTaGTCAGAGTGGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: CSWQDTVALLPTLVRVEFPRRNW*SEWGGG
Trigger: TCCCCCACCCCACTCTGACCACCAGTTCCTCCTTGG...AAATTCAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGTCCTGCCAGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TGCTCCTGGCAGGACACTGTGGCCCTCCTGCCCACGTTGGTGCGGGTTGAATTTGCCCAGGGGACTCAATaGCGCTGTCATCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: CSWQDTVALLPTLVRVEFAQGTQ*RCHQRG
Trigger: GCCCCTTTGATGACAGCGCCATTGAGTCCCCTGGGC...AAATTCAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGTCCTGCCAGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CAA 72 bp TGCTCCTGGCAGGACACTGTGGCCCTCCTGCCCACGTaGGTGCGGGTTGAATTTGACGGCCCAGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: CSWQDTVALLPT*VRVEFDGPAEF
Trigger: GAATTCTGCTGGGCCGTCAAATTCAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGTCCTGCCAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp GAACTGGTGGTCAGAGTGGGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCCACATCCAACCCCACTaGCCGGCATGCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ELVVRVGWGIPGTICSCLHIQPH*PACTWG
Trigger: GCCCCAGGTGCATGCCGGTCAGTGGGGTTGGATGTG...GAGGCATGAACAAATTGTACCGGGTATCCCCCACCCCACTCTGACCACCAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTCGCCCTCCACGCGGCTaGAGCCACGCCGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVRPPRG*SHAGPA
Trigger: TGCTGGACCGGCGTGGCTGCAGCCGCGTGGAGGGCG...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp GGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGTCCTGCCCACGTTGGTaGGGGTTGAATTTGACGGCC +
Preference number: 4 (lower is better)
Translates to: GWGIPGTICSCLNTSHRGSCPRW*GLNLTA
Trigger: GGCCGTCAAATTCAACCCGCACCAACGTGGGCAGGA...CCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATCCCCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TCTTCCTACTGTCCAGGCCTCTCCCCCACCTCTCTTGTGTGGCCCAGCACCCTGAGGCTGCCCTCCTGCTaGAGTGCCCATAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSYCPGLSPTSLVWPSTLRLPSC*SAHNSS
Trigger: GGAAGAATTATGGGCACTGCAGCAGGAGGGCAGCCT...CAGGGTGCTGGGCCACACAAGAGAGGTGGGGGAGAGGCCTGGACAGTAGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TGCTCCTGGCAGGACACTGTGGCCCTCCTGCCCACGTTGGTGCGGGTTGAATTTCTGCCAACAGGCAAATaGTGTGCTGCCGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CSWQDTVALLPTLVRVEFLPTGK*CAAVCL
Trigger: CAGGCAGACGGCAGCACAGCATTTGCCTGTTGGCAG...AAATTCAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGTCCTGCCAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CGAGGCTCTAGATCAAGGTGGGAGGTTAGTCCTCACTCCCTTCAGGGGCTGGACATGGCATCTCCAATCTaGGGACCTGCCACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RGSRSRWEVSPHSLQGLDMASPI*GPATSQ
Trigger: CTGGGAGGTGGCAGGTCCTCAGATTGGAGATGCCAT...GTCCAGCCCCTGAAGGGAGTGAGGACTAACCTCCCACCTTGATCTAGAGCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGAGGCGGAAGTTACAGTaGGCTGAGACCACACCATTG +
Preference number: 4 (lower is better)
Translates to: SEDLPPPRGPEALMPQELRRKLQ*AETTPL
Trigger: CAATGGTGTGGTCTCAGCTCACTGTAACTTCCGCCT...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp GATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGCCTGCCAGGCCTTTACTTGTACGTaGGCGCTTAGGGGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: DTRYNLFMPQHQPPRACQAFTCT*ALRGPV
Trigger: GACAGGGCCCCTAAGCGCTCACGTACAAGTAAAGGC...CTGGCAGGCCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp GGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGAGTGCATGCGACAGATaGGGCAGAGATTGTGCCGTA +
Preference number: 4 (lower is better)
Translates to: GWGIPGTICSCLNTSHRGSACDR*GRDCAV
Trigger: TACGGCACAATCTCTGCCTCATCTGTCGCATGCACT...CCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATCCCCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CGAGGCTCTAGATCAAGGTGGGAGGTTAGTCCTCACTCCCTTCAGGGGCTGGACTGCTGTAAGTCTTCGTaGGAGCCACTGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGSRSRWEVSPHSLQGLDCCKSS*EPLASF
Trigger: GAAGCTGGCCAGTGGCTCTCACGAAGACTTACAGCA...GTCCAGCCCCTGAAGGGAGTGAGGACTAACCTCCCACCTTGATCTAGAGCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp TGCTCCTGGCAGGACACTGTGGCCCTCCTGCCCACGTTGGTGCGGGTTGAATTTTCCCGGGCATGGTCATaGAAGCGTGGTTCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: CSWQDTVALLPTLVRVEFSRAWS*KRGSVR
Trigger: TCTTACAGAACCACGCTTTCATGACCATGCCCGGGA...AAATTCAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGTCCTGCCAGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTAGCTCACAGGCCACGTaGAGCGACGTGCCACCGCCC +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVSSQAT*SDVPPP
Trigger: GGGCGGTGGCACGTCGCTGCACGTGGCCTGTGAGCT...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TGCTCCTGGCAGGACACTGTGGCCCTCCTGCCCACGTTGGTGCGGGTTGAATTTGGCTCTAGATCAAGGTaGGAGGTTAGTCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: CSWQDTVALLPTLVRVEFGSRSR*EVSPHS
Trigger: GGAGTGAGGACTAACCTCCCACCTTGATCTAGAGCC...AAATTCAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGTCCTGCCAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp CGAGGCTCTAGATCAAGGTGGGAGGTTAGTCCTCACTCCCTTCAGGGGCTGGACAGGAGCAGCAAGACCTaGTGCCCATTAGTCATGGGG +
Preference number: 4 (lower is better)
Translates to: RGSRSRWEVSPHSLQGLDRSSKT*CPLVMG
Trigger: CCCCATGACTAATGGGCACCAGGTCTTGCTGCTCCT...GTCCAGCCCCTGAAGGGAGTGAGGACTAACCTCCCACCTTGATCTAGAGCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp GAACTGGTGGTCAGAGTGGGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCAGCCTGTGTCCTGCCTaGCCAGGCAATGAGTACCGG +
Preference number: 4 (lower is better)
Translates to: ELVVRVGWGIPGTICSCLSLCPA*PGNEYR
Trigger: CCGGTACTCATTGCCTGGCCAGGCAGGACACAGGCT...GAGGCATGAACAAATTGTACCGGGTATCCCCCACCCCACTCTGACCACCAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp AGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATTTGTTGTAAAGTGCTGCCGTCTGCCTaGCTGACTCCGGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RERRGRETTQTLEGICCKVLPSA*LTPALP
Trigger: TGGGAGGGCCGGAGTCAGCCAGGCAGACGGCAGCAC...TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp TGGTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCAAGGTACTATCAGGATaGAGTCAGCACGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: WSRTHSSGEVEPSLQPAVKVLSG*SQHAEQ
Trigger: TTGCTCTGCGTGCTGACTTCATCCTGATAGTACCTT...GACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTCAGAGCTCGTTCTCTTaGCTTCCAGGCCTTTTTATA +
Preference number: 4 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPQSSFS*LPGLFI
Trigger: TATAAAAAGGCCTGGAAGCCAAGAGAACGAGCTCTG...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp CGAGGCTCTAGATCAAGGTGGGAGGTTAGTCCTCACTCCCTTCAGGGGCTGGACACTCCACGACCAGCCTaGGTTCTTCATCCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: RGSRSRWEVSPHSLQGLDTPRPA*VLHPGN
Trigger: GTTACCAGGATGAAGAACCCAGGCTGGTCGTGGAGT...GTCCAGCCCCTGAAGGGAGTGAGGACTAACCTCCCACCTTGATCTAGAGCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp GGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGGTGTTCTCTCACTGCTaGCTTTTGATGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GWGIPGTICSCLNTSHRGVFSHC*LLMSPG
Trigger: TCCTGGGCTCATCAAAAGCCAGCAGTGAGAGAACAC...CCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATCCCCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp GATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGCCTGCCAGGGTACAATTTGTTCATaGCTCAACACCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: DTRYNLFMPQHQPPRACQGTICS*LNTSHR
Trigger: GCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACC...CTGGCAGGCCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp AGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATTTGTTGTAAAACACTGTGGCCCTCCTaGCCACGTTGGTGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: RERRGRETTQTLEGICCKTLWPS*PRWCGL
Trigger: CAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGT...TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp GGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGAGAAAACCTGCCACTTaGAACTCACCTGACCATCCA +
Preference number: 4 (lower is better)
Translates to: GWGIPGTICSCLNTSHRGRKPAT*NSPDHP
Trigger: TGGATGGTCAGGTGAGTTCCAAGTGGCAGGTTTTCT...CCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATCCCCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp GAACTGGTGGTCAGAGTGGGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCGTGGTCAGAGTGGGGTaGGGGATACCCGGTACAATT +
Preference number: 4 (lower is better)
Translates to: ELVVRVGWGIPGTICSCLVVRVG*GIPGTI
Trigger: AATTGTACCGGGTATCCCCCACCCCACTCTGACCAC...GAGGCATGAACAAATTGTACCGGGTATCCCCCACCCCACTCTGACCACCAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp GCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTGCAGCTCGAGAGGCGTaGGGCCGCCGCCGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: AVQRSIYIKCRYNALKNSAAREA*GRRRPA
Trigger: TGCGGGACGGCGGCGGCCTCACGCCTCTCGAGCTGC...ACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR TCA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGGAAGAACCTTCTTCTaGATAGGATTTGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPGRTFF*IGFEVT
Trigger: AGTTACCTCAAATCCTATTCAGAAGAAGGTTCTTCC...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TGCATGCGACAGATGAGGCAGAGATTGTGCCGTACAGAGATCAATATATATAAACAGCCACCGCGGGCCTaGCAGCCCTGTGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: CMRQMRQRLCRTEINIYKQPPRA*QPCVPS
Trigger: GGAGGGCACACAGGGCTGGCAGGCCCGCGGTGGCTG...TTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTAAGAACCACGGCAGCTaGGCCAGGCCACTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVKNHGS*ARPLLS
Trigger: AGACAGGAGTGGCCTGGCGCAGCTGCCGTGGTTCTT...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACTCCTTCCATCTTGATTaGAGTGGTGATTACACACAT +
Preference number: 4 (lower is better)
Translates to: LQGLDSELKARAQLHPENSFHLD*SGDYTH
Trigger: ATGTGTGTAATCACCACTGCAATCAAGATGGAAGGA...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACAGACAACCCAAACGTTaGAGGGTATTTGTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: LQGLDSELKARAQLHPENRQPKR*RVFVVN
Trigger: GTTTACAACAAATACCCTCCAACGTTTGGGTTGTCT...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACATGGTCATGAAAGCGTaGTTCTGTAAGAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: LQGLDSELKARAQLHPENMVMKA*FCKKSE
Trigger: CTCTGATTTCTTACAGAACCACGCTTTCATGACCAT...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTCCGCACTGCACAGTCTaGCATCCTCTTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVPHCTV*HPLQVP
Trigger: TGGGACCTGAAGAGGATGGCAGACTGTGCAGTGCGG...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAACGCCCTCCACGCGGCTaGAGCCACGCCGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKRPPRG*SHAGPA
Trigger: TGCTGGACCGGCGTGGCTGCAGCCGCGTGGAGGGCG...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAAGGTGGACGACGGCTGTaGGGGCGGGGTGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKGGRRL*GRGEPG
Trigger: CCCAGGCTCACCCCGCCCGCACAGCCGTCGTCCACC...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559651.1
CDS-3UTR CCA 90 bp GCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTCCGCGCTCGTCCCAGTaGAAGGCCTCGCTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: AVQRSIYIKCRYNALKNSPRSSQ*KASLAR
Trigger: GCGCGCCAGCGAGGCCTTCCACTGGGACGAGCGCGG...ACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CCA 90 bp TGCATGCGACAGATGAGGCAGAGATTGTGCCGTACAGAGATCAATATATATAAACCACCTGGCACCCACTaGGGGCCACCAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CMRQMRQRLCRTEINIYKPPGTH*GPPGSP
Trigger: TGGGCTCCCTGGTGGCCCCCAGTGGGTGCCAGGTGG...TTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp AGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATTTGTTGTAAAAACAGCTCTCCAGGCTaGGGCAAGAAGCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RERRGRETTQTLEGICCKNSSPG*GKKPVP
Trigger: AGGGACAGGCTTCTTGCCCCAGCCTGGAGAGCTGTT...TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTCCCTCCTGCCCACGTTaGTGCGGGTTGAATTTGACG +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVPSCPR*CGLNLT
Trigger: CGTCAAATTCAACCCGCACCAACGTGGGCAGGAGGG...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp GGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTTCTCTGGGGACCATGTaGGGCGGTGGGGCGCTTGAG +
Preference number: 4 (lower is better)
Translates to: GVKRNKFSTCDQQLVIVVSLGTM*GGGALE
Trigger: CTCAAGCGCCCCACCGCCCCACATGGTCCCCAGAGA...AACCACTATGACCAGCTGCTGATCACAAGTAGAGAACTTGTTTCTTTTCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp GGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGAGCAAATTCCTCTCATaGAATAGCCTGCAGCTATTA +
Preference number: 4 (lower is better)
Translates to: GWGIPGTICSCLNTSHRGSKFLS*NSLQLL
Trigger: TAATAGCTGCAGGCTATTTCATGAGAGGAATTTGCT...CCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATCCCCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAAGCGGTTGTAGCGCACTaGCAGCGCCACGTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKAVVAH*QRHVRP
Trigger: GGGCCGCACGTGGCGCTGGCAGTGCGCTACAACCGC...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp TGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATGCGGTTGTAGCGCACTaGCAGCGCCACGTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: CAVQRSIYIKCRYNALKNAVVAH*QRHVRP
Trigger: GGGCCGCACGTGGCGCTGGCAGTGCGCTACAACCGC...ATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp TGCATGCGACAGATGAGGCAGAGATTGTGCCGTACAGAGATCAATATATATAAAGGGGCCCACTCTCAGTaGCCGCCAGCCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CMRQMRQRLCRTEINIYKGAHSQ*PPACVL
Trigger: CAGGACACAGGCTGGCGGGCACTGAGAGTGGGCCCC...TTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGGTTGCCTGGAGTATATaGCTTTTTGTATCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: SEDLPPPRGPEALMPQELVAWSI*LFVSFE
Trigger: TTCAAAGGATACAAAAAGGCATATACTCCAGGCAAC...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTAAGGTTCAGAGGCACTaGTCCAGGACACACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVKVQRH*SRTHSS
Trigger: GCTGCTGTGTGTCCTGGACCAGTGCCTCTGAACCTT...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCAGCGCGTCCCACGGCATaGTGGCGGCGGGGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPARPTA*WRRGVP
Trigger: AGGAACGCCCCGCCGCCAGCATGCCGTGGGACGCGC...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCACGTGCAGCGACGTaGCACCGCCCTCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVPRAAT*HRPPRG
Trigger: GCCGCGTGGAGGGCGGTGGCACGTCGCTGCACGTGG...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp TCTTCCTACTGTCCAGGCCTCTCCCCCACCTCTCTTGTGTGGCCCAGCACCCTGGGTAACTTAGGAAACTaGTCTCAATACGGAATTTTA +
Preference number: 4 (lower is better)
Translates to: SSYCPGLSPTSLVWPSTLGNLGN*SQYGIL
Trigger: TAAAATTCCGTATTGAGAGCAGTTTCCTAAGTTACC...CAGGGTGCTGGGCCACACAAGAGAGGTGGGGGAGAGGCCTGGACAGTAGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATCGCGCCGCGGGAACGTaGCCAGCAGGTAATGCGCGT +
Preference number: 4 (lower is better)
Translates to: CAVQRSIYIKCRYNALKNRAAGT*PAGNAR
Trigger: ACGCGCATTACCTGCTGGCCACGTTCCCGCGGCGCG...ATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CCA 90 bp CGAGGCTCTAGATCAAGGTGGGAGGTTAGTCCTCACTCCCTTCAGGGGCTGGACCCCAAGAATTGGGCTTaGAAAGATGTTAATATCCAC +
Preference number: 4 (lower is better)
Translates to: RGSRSRWEVSPHSLQGLDPKNWA*KDVNIH
Trigger: GTGGATATTAACATCTTTCCAAGCCCAATTCTTGGG...GTCCAGCCCCTGAAGGGAGTGAGGACTAACCTCCCACCTTGATCTAGAGCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CAA 72 bp CCCAGCCCCCAGTGCATGCGACAGATGAGGCAGAGATaGTGCCGTACAGAGATCAATATATATAAAGTGCCG +
Preference number: 4 (lower is better)
Translates to: PSPQCMRQMRQR*CRTEINIYKVP
Trigger: CGGCACTTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCACTGGGGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATGCAAGGTGCGCAGGATaGGGCGCAGAATGCCCACGC +
Preference number: 4 (lower is better)
Translates to: CAVQRSIYIKCRYNALKNARCAG*GAECPR
Trigger: GCGTGGGCATTCTGCGCCGCATCCTGCGCACCTTGC...ATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp TGCTCCTGGCAGGACACTGTGGCCCTCCTGCCCACGTTGGTGCGGGTTGAATTTTCAATATATATAAAGTaGCGGTACAACGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: CSWQDTVALLPTLVRVEFSIYIK*RYNALK
Trigger: TTTCAGAGCGTTGTACCGGCACTTTATATATATTGA...AAATTCAACCCGCACCAACGTGGGCAGGAGGGCCACAGTGTCCTGCCAGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATCTCGGGGAAGCGGCCTaGAGAGATGGCGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: CAVQRSIYIKCRYNALKNLGEAA*RDGGDQ
Trigger: CTGGTCACCGCCATCTCTCCAGGCCGCTTCCCCGAG...ATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAACAACGGCTGCAGGAATaGGGGCAGCGGCAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKQRLQE*GQRQLV
Trigger: GACGAGCTGCCGCTGCCCCCATTCCTGCAGCCGTTG...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR TCA 90 bp GGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTGAGGAGATAGGAGGGTaGAAACAACCTGGAGACCGG +
Preference number: 4 (lower is better)
Translates to: GVKRNKFSTCDQQLVIVVEEIGG*KQPGDR
Trigger: CCGGTCTCCAGGTTGTTTTCACCCTCCTATCTCCTC...AACCACTATGACCAGCTGCTGATCACAAGTAGAGAACTTGTTTCTTTTCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAAGGGCGGTGGGGCGCTTaGGACAGTGTTTCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKGRWGA*DSVSLH
Trigger: ATGCAGGGAAACACTGTCTCAAGCGCCCCACCGCCC...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp GCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTGGATGCGGCGCAGAATaGCCACGCGGTTGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: AVQRSIYIKCRYNALKNSGCGAE*PRGCSA
Trigger: TGCGCTACAACCGCGTGGGCATTCTGCGCCGCATCC...ACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp GCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTGGAAGTCGCGCAAGGTaGGCAGGATGCGGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: AVQRSIYIKCRYNALKNSGSRAR*AGCGAE
Trigger: TTCTGCGCCGCATCCTGCGCACCTTGCGCGACTTCC...ACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCAAGCTCACAGGCCACGTaGAGCGACGTGCCACCGCCC +
Preference number: 4 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPSSQAT*SDVPPP
Trigger: GGGCGGTGGCACGTCGCTGCACGTGGCCTGTGAGCT...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGCGGTGACCAGCACCTaGATGGCGCGCGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVAVTST*MARAKS
Trigger: GCTCTTCGCGCGCGCCATGCAGGTGCTGGTCACCGC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp TGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATATCCAGCGCCTAGGGTaGTCCGGGCCTAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: CAVQRSIYIKCRYNALKNIQRLG*SGPSLC
Trigger: GCAAAGGCTAGGCCCGGAGCACCCTAGGCGCTGGAT...ATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp GGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTTCCGTACGTAGGCCTTaGATCTCGCCACCTCCACTT +
Preference number: 4 (lower is better)
Translates to: GVKRNKFSTCDQQLVIVVSVRRP*ISPPPL
Trigger: AAGTGGAGGTGGCGAGATGCAAGGCCTACGTACGGA...AACCACTATGACCAGCTGCTGATCACAAGTAGAGAACTTGTTTCTTTTCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCAGCGGCGGGGCGTTCCTaGGCCTCAAGGCATGGATCC +
Preference number: 4 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPAAGRS*ASRHGS
Trigger: GGATCCATGCCTTGAGGCCCAGGAACGCCCCGCCGC...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAAAGGCCCGCCAGCCACTaGAACTTGTCCTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKRPASH*NLSSPS
Trigger: GCTGGGTGAGGACAAGTTCCAGTGGCTGGCGGGCCT...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CCA 90 bp GCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTAGGCCCGCCAGCCACTaGAACTTGTCCTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: AVQRSIYIKCRYNALKNSRPASH*NLSSPS
Trigger: GCTGGGTGAGGACAAGTTCCAGTGGCTGGCGGGCCT...ACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CCA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCACCTGTGTGCCCTCCCTaGCCCGGAGTCCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPPVCPP*PGVHRV
Trigger: CACCCTGTGGACTCCGGGCCAGGGAGGGCACACAGG...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp GCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTCCCACCTCTCTTGTGTaGCCCAGCACCCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: AVQRSIYIKCRYNALKNSPTSLV*PSTLDS
Trigger: GGAGTCCAGGGTGCTGGGCCACACAAGAGAGGTGGG...ACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAAGGTGAGCCTGGGGCGTaGCACCAGCCCTCTATCCAA +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKGEPGA*HQPSIQ
Trigger: TTGGATAGAGGGCTGGTGCCACGCCCCAGGCTCACC...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559651.1
CDS-3UTR TCA 90 bp GCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTCACTTGGAACTCACCTaGCCATCCAAGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AVQRSIYIKCRYNALKNSHLELT*PSKPSP
Trigger: GGGGCTGGGCTTGGATGGTCAGGTGAGTTCCAAGTG...ACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp TGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATGGTTGCAGGGGGTCCTaGACCACAGATCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: CAVQRSIYIKCRYNALKNGCRGS*TTDPWR
Trigger: TCTCCAGGGATCTGTGGTTCAGGACCCCCTGCAACC...ATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp GGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTAGAGATGCTGACGCCTaGATAAGGTTGGGATTCGGG +
Preference number: 4 (lower is better)
Translates to: GVKRNKFSTCDQQLVIVVRDADA*IRLGFG
Trigger: CCCGAATCCCAACCTTATTCAGGCGTCAGCATCTCT...AACCACTATGACCAGCTGCTGATCACAAGTAGAGAACTTGTTTCTTTTCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTCAAGTTCTCTACTTGTaGTCAGCAGCTGGTCATAGT +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVQVLYL*SAAGHS
Trigger: ACTATGACCAGCTGCTGATCACAAGTAGAGAACTTG...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGTGAGGTCCAACGGCTaGAGGAATGGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVVRSNG*RNGGSG
Trigger: GCCGCTGCCCCCATTCCTGCAGCCGTTGGACCTCAC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGGGCCAGGGGCCTGCTaGCACTGCAGAGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVGPGAC*HCRGEK
Trigger: CTTCTCACCTCTGCAGTGGCAGCAGGCCCCTGGCCC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTGCTGGTCATAGTGGTTaGCTGGAGTATATGCCTTTT +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVAGHSG*LEYMPF
Trigger: AAAAGGCATATACTCCAGGCAACCACTATGACCAGC...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATCAGCTGTCACCCATCTaGGACGCACACCTGTCCGAG +
Preference number: 4 (lower is better)
Translates to: CAVQRSIYIKCRYNALKNQLSPI*DAHLSE
Trigger: CTCGGACAGGTGTGCGTCCCAGATGGGTGACAGCTG...ATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp GCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTCCTGGCTATCCTCCCTaGTGTCTCGGCTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: AVQRSIYIKCRYNALKNSPGYPP*CLGSES
Trigger: GCTCTCAGAGCCGAGACACCAGGGAGGATAGCCAGG...ACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp GGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTTGTTTCCCTGCATCGTaGCCGGACCTCTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: GVKRNKFSTCDQQLVIVVCFPAS*PDLSTQ
Trigger: TTGAGTAGAGAGGTCCGGCCACGATGCAGGGAAACA...AACCACTATGACCAGCTGCTGATCACAAGTAGAGAACTTGTTTCTTTTCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGCACAGGACCTCCCGTaGGAACCCTACGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVAQDLP*EPYAAE
Trigger: CTCTGCAGCGTAGGGTTCTCACGGGAGGTCCTGTGC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp AGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTTGGAGGGTATTTGTTGTAAAACAGCCATGTTAACGTaGGCAAATTCCTCTCATGAA +
Preference number: 4 (lower is better)
Translates to: RERRGRETTQTLEGICCKTAMLT*ANSSHE
Trigger: TTCATGAGAGGAATTTGCTCACGTTAACATGGCTGT...TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGACCTTCAGCCCTCTaGTCCTGGCAGGACACTGTG +
Preference number: 4 (lower is better)
Translates to: CAVQRSIYIKCRYNALKNRPSAL*SWQDTV
Trigger: CACAGTGTCCTGCCAGGAGCAGAGGGCTGAAGGTCT...ATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp GCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTGCCACCAAGGCCACCTaGCAACAGGCAAATGCTGTG +
Preference number: 4 (lower is better)
Translates to: AVQRSIYIKCRYNALKNSATKAT*QQANAV
Trigger: CACAGCATTTGCCTGTTGGCAGGTGGCCTTGGTGGC...ACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAAGAGACAGTGTTTCCCTaGATCGTGGCCGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKETVFP*IVAGPL
Trigger: GAGAGGTCCGGCCACGATGCAGGGAAACACTGTCTC...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TGCATGCGACAGATGAGGCAGAGATTGTGCCGTACAGAGATCAATATATATAAAAGGGTGAAAACAACCTaGAGACCGGTGTGCACCGCA +
Preference number: 4 (lower is better)
Translates to: CMRQMRQRLCRTEINIYKRVKTT*RPVCTA
Trigger: TGCGGTGCACACCGGTCTCCAGGTTGTTTTCACCCT...TTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCACTGGGCCTCAAGGCATaGATCCCGCGAAGGCACACC +
Preference number: 4 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPLGLKA*IPRRHT
Trigger: GGTGTGCCTTCGCGGGATCCATGCCTTGAGGCCCAG...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CCA 90 bp GCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTCCCAGCCTCCCAGCCTaGAGTTGTGGTGAATTCGCA +
Preference number: 4 (lower is better)
Translates to: AVQRSIYIKCRYNALKNSPSLPA*SCGEFA
Trigger: TGCGAATTCACCACAACTCCAGGCTGGGAGGCTGGG...ACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCTCAGCCCTCTGCTCCTaGCAGGACACTGTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVSALCS*QDTVAL
Trigger: GAGGGCCACAGTGTCCTGCCAGGAGCAGAGGGCTGA...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
3UTR CAA 72 bp GAAAGGGAGAGAAGGGGGAGGGAGACAACCCAAACGTaGGAGGGTATTTGTTGTAAACTTCAAACTTTTGGC +
Preference number: 4 (lower is better)
Translates to: ERERRGRETTQT*EGICCKLQTFG
Trigger: GCCAAAAGTTTGAAGTTTACAACAAATACCCTCCAACGTTTGGGTTGTCTCCCTCCCCCTTCTCTCCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCTAGCCTTTGCCAGTaGGGTCCAACGGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVPSLCQ*GPTAAG
Trigger: TCCTGCAGCCGTTGGACCTCACTGGCAAAGGCTAGG...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCAAGGCGAACGACGACTTaGGGCACTGCTTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPRRTTT*GTASAL
Trigger: GAGCGCAGAAGCAGTGCCGCAAGTCGTCGTTCGCCT...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp TGCATGCGACAGATGAGGCAGAGATTGTGCCGTACAGAGATCAATATATATAAAAGCAGCAAGACCTGGTaGCCATTAGTCATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: CMRQMRQRLCRTEINIYKSSKTW*PLVMGE
Trigger: TTCCCCCATGACTAATGGGCACCAGGTCTTGCTGCT...TTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAAATCCACTGCCCCAAGTaGCAAGGTTCAGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKIHCPK*QGSEAL
Trigger: CAGTGCCTCTGAACCTTGGCACTTGGGGCAGTGGAT...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCAGTGGAAGGCCTCGCTaGCGCGCATATCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVSGRPR*RAYPPA
Trigger: TGCTGGAGGATATGCGCGCCAGCGAGGCCTTCCACT...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGAAGCAGAGGTGAGATaGGAGCAGCTTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVEAEVR*EQLGSP
Trigger: GGGGCTCCCAAGCTGCTCCCATCTCACCTCTGCTTC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp TGCATGCGACAGATGAGGCAGAGATTGTGCCGTACAGAGATCAATATATATAAATTCATCCTGGTAACCTaGCAATGGATTTCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CMRQMRQRLCRTEINIYKFILVT*QWISWG
Trigger: GCCCCACGAAATCCATTGTCAGGTTACCAGGATGAA...TTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTGTTATCAAGGCTGGTTaGGTCAAATATCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVVIKAG*VKYHKV
Trigger: TACTTTGTGATATTTGACTCAACCAGCCTTGATAAC...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCGCACTGCACAGTCTaGCATCCTCTTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVPHCTV*HPLQVP
Trigger: TGGGACCTGAAGAGGATGGCAGACTGTGCAGTGCGG...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCACGGTGTGCACCGCACTaGACAGTCTGCCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPRCAPH*TVCHPL
Trigger: AAGAGGATGGCAGACTGTGCAGTGCGGTGCACACCG...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCTGGAGCGATTGCCTTTaGGAAGCCACCAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVWSDCL*EATKAT
Trigger: GGTGGCCTTGGTGGCTTCCCAAAGGCAATCGCTCCA...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGAGGAGATAGGAGGGTaGAAACAACCTGGAGACCGG +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVEEIGG*KQPGDR
Trigger: CCGGTCTCCAGGTTGTTTTCACCCTCCTATCTCCTC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR TCA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCATTGTATGCGTGCAGATaGCGCACTCAGTCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPLYACR*RTQSAP
Trigger: AGGCGCTGACTGAGTGCGTCATCTGCACGCATACAA...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAACTAGCAGTGCTTGTATaGGTGCAGATGACGCACTCA +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKLAVLV*VQMTHS
Trigger: TGAGTGCGTCATCTGCACGCATACAAGCACTGCTAG...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCAGGGTGAAAACAACCTaGAGACCGGTGTGCACCGCA +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVRVKTT*RPVCTA
Trigger: TGCGGTGCACACCGGTCTCCAGGTTGTTTTCACCCT...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR TCA 90 bp TGCATGCGACAGATGAGGCAGAGATTGTGCCGTACAGAGATCAATATATATAAAGCCGGTACAACGCTCTaGAAAATAGTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: CMRQMRQRLCRTEINIYKAGTTL*KIVLSQ
Trigger: TTGGGACAAAACTATTTTTCAGAGCGTTGTACCGGC...TTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGGGGTGTTCTCTCACTaGTGGCTTTTGATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVGVFSH*WLLMSP
Trigger: TGGGCTCATCAAAAGCCAGCAGTGAGAGAACACCCC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CCA 90 bp TGCATGCGACAGATGAGGCAGAGATTGTGCCGTACAGAGATCAATATATATAAAACACTTAAAACAGCCTaGCATTTGGGAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: CMRQMRQRLCRTEINIYKTLKTA*HLGTAM
Trigger: CATGGCTGTTCCCAAATGCCAGGCTGTTTTAAGTGT...TTTATATATATTGATCTCTGTACGGCACAATCTCTGCCTCATCTGTCGCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCAGCCTGTCCCTACAGTaGTACAACCACCCCTCAATA +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVSLSLQ*YNHPSI
Trigger: TATTGAGGGGTGGTTGTATCACTGTAGGGACAGGCT...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGAAGTTACAGTGAGCTaGGACCACACCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVEVTVS*DHTIAL
Trigger: GAGTGCAATGGTGTGGTCTCAGCTCACTGTAACTTC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAAGATGTTAATATCCACTaGCCCAAGTGCCAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKDVNIH*PKCQGS
Trigger: TGAACCTTGGCACTTGGGGCAGTGGATATTAACATC...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR TCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGCCGGTACAACGCTCTaGAAAATAGTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVAGTTL*KIVLSQ
Trigger: TTGGGACAAAACTATTTTTCAGAGCGTTGTACCGGC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR GCA 90 bp TGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATATGAGGCAGAGATTGTaGCGTACAGAGATCAATATA +
Preference number: 4 (lower is better)
Translates to: CAVQRSIYIKCRYNALKNMRQRL*RTEINI
Trigger: TATATTGATCTCTGTACGGCACAATCTCTGCCTCAT...ATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR GCA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCTATCCAAACATGTTTaGTTACACGTTAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVLSKHV*LHVSSW
Trigger: CCAGGAGCTAACGTGTAAGCAAACATGTTTGGATAG...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559651.1
CDS-3UTR GCA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATCAATATATATAAAGTaGCGGTACAACGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKSIYIK*RYNALK
Trigger: TTTCAGAGCGTTGTACCGGCACTTTATATATATTGA...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CCA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCAGTCATAGTGGTTGCCTaGAGTATATGCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPVIVVA*SICLFV
Trigger: TACAAAAAGGCATATACTCCAGGCAACCACTATGAC...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS GCA 90 bp GCTCACAGGCCACGTGCAGCGACGTGCCACCGCCCTCCACGCGGCTaGAGCCACGCCGGTCCAGCACGCGCGCCCGCTCCTCGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: AHRPRAATCHRPPRG*SHAGPARAPAPRPG
Trigger: TCCCGGCCGAGGAGCGGGCGCGCGTGCTGGACCGGCGTGGCTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCACGTGGCCTGTGAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 90 bp GTGCGGCCCGGGAGCCGCGCAGCAGCGGAAGCCGGCACTGGGCGGTaGGAGCGCGCGCCGCGGGAACGTGGCCAGCAGGTAATGCGCGTA +
Preference number: 5 (lower is better)
Translates to: VRPGSRAAAEAGTGR*ERAPRERGQQVMRV
Trigger: TACGCGCATTACCTGCTGGCCACGTTCCCGCGGCGCGCGCTCGCACCGCCCAGTGCCGGCTTCCGCTGCTGCGCGGCTCCCGGGCCGCAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 90 bp GCCAGGCCCGCCAGCCACTGGAACTTGTCCTCACCCAGCAGCCGCTaGCAGCGCGGCCGGTCGCCCAGCAGCTCCTGGCGGGCCGAGCCG +
Preference number: 5 (lower is better)
Translates to: ARPASHWNLSSPSSR*QRGRSPSSSWRAEP
Trigger: CGGCTCGGCCCGCCAGGAGCTGCTGGGCGACCGGCCGCGCTGGCAGCGGCTGCTGGGTGAGGACAAGTTCCAGTGGCTGGCGGGCCTGGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286918.9
ENST00000559651.1
ENST00000560748.5
CDS CCA 90 bp AGAGGCGTGAGGCCGCCGCCGTCCCGCAGACCGGGCGAGGCGCCGTaGCCCAGCAGCAGGAAGAGGCACTCGGGGCGCGCCAGCTCACAG +
Preference number: 5 (lower is better)
Translates to: RGVRPPPSRRPGEAP*PSSRKRHSGRASSQ
Trigger: CTGTGAGCTGGCGCGCCCCGAGTGCCTCTTCCTGCTGCTGGGCCACGGCGCCTCGCCCGGTCTGCGGGACGGCGGCGGCCTCACGCCTCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 90 bp AGAGGCACTCGGGGCGCGCCAGCTCACAGGCCACGTGCAGCGACGTaGCACCGCCCTCCACGCGGCTGCAGCCACGCCGGTCCAGCACGC +
Preference number: 5 (lower is better)
Translates to: RGTRGAPAHRPRAAT*HRPPRGCSHAGPAR
Trigger: GCGTGCTGGACCGGCGTGGCTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCACGTGGCCTGTGAGCTGGCGCGCCCCGAGTGCCTCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 90 bp AGGGCCTCGGGGAAGCGGCCTGGAGAGATGGCGGTGACCAGCACCTaGATGGCGCGCGCGAAGAGCGAGGGCGGCGCCAGGCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: RASGKRPGEMAVTST*MARAKSEGGARPAS
Trigger: GCTGGCGGGCCTGGCGCCGCCCTCGCTCTTCGCGCGCGCCATGCAGGTGCTGGTCACCGCCATCTCTCCAGGCCGCTTCCCCGAGGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286918.9
ENST00000559651.1
ENST00000560748.5
CDS GCA 90 bp GGTGCGCAGGATGCGGCGCAGAATGCCCACGCGGTTGTAGCGCACTaGCAGCGCCACGTGCGGCCCGGGAGCCGCGCAGCAGCGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GAQDAAQNAHAVVAH*QRHVRPGSRAAAEA
Trigger: GGCTTCCGCTGCTGCGCGGCTCCCGGGCCGCACGTGGCGCTGGCAGTGCGCTACAACCGCGTGGGCATTCTGCGCCGCATCCTGCGCACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 90 bp AGCAGCAGGAAGAGGCACTCGGGGCGCGCCAGCTCACAGGCCACGTaGAGCGACGTGCCACCGCCCTCCACGCGGCTGCAGCCACGCCGG +
Preference number: 5 (lower is better)
Translates to: SSRKRHSGRASSQAT*SDVPPPSTRLQPRR
Trigger: CCGGCGTGGCTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCACGTGGCCTGTGAGCTGGCGCGCCCCGAGTGCCTCTTCCTGCTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 90 bp CCTCGGCCGGGAAGTCGCGCAAGGTGCGCAGGATGCGGCGCAGAATaGCCACGCGGTTGTAGCGCACTGCCAGCGCCACGTGCGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PRPGSRARCAGCGAE*PRGCSALPAPRAAR
Trigger: CCGGGCCGCACGTGGCGCTGGCAGTGCGCTACAACCGCGTGGGCATTCTGCGCCGCATCCTGCGCACCTTGCGCGACTTCCCGGCCGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 90 bp CGCGCGCCCGCTCCTCGGCCGGGAAGTCGCGCAAGGTGCGCAGGATaGGGCGCAGAATGCCCACGCGGTTGTAGCGCACTGCCAGCGCCA +
Preference number: 5 (lower is better)
Translates to: RAPAPRPGSRARCAG*GAECPRGCSALPAP
Trigger: TGGCGCTGGCAGTGCGCTACAACCGCGTGGGCATTCTGCGCCGCATCCTGCGCACCTTGCGCGACTTCCCGGCCGAGGAGCGGGCGCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS CCA 90 bp CCAGGCCGCCGCGCGTCCCACGGCATGCTGGCGGCGGGGCGTTCCTaGGCCTCAAGGCATGGATCCCGCGAAGGCACACCTGGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: PGRRASHGMLAAGRS*ASRHGSREGTPGSC
Trigger: GCAGGAACCAGGTGTGCCTTCGCGGGATCCATGCCTTGAGGCCCAGGAACGCCCCGCCGCCAGCATGCCGTGGGACGCGCGGCGGCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286918.9
ENST00000557902.1
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 90 bp CGGGTAGCAGGTCGCGCACCGCCTGGTAGAAGGCGAACGACGACTTaGGGCACTGCTTCTGCGCTCGCGAGCGCGCCGCGCCCGAGGCCT +
Preference number: 5 (lower is better)
Translates to: RVAGRAPPGRRRTTT*GTASALASAPRPRP
Trigger: AGGCCTCGGGCGCGGCGCGCTCGCGAGCGCAGAAGCAGTGCCGCAAGTCGTCGTTCGCCTTCTACCAGGCGGTGCGCGACCTGCTACCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286918.9
ENST00000557902.1
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 90 bp GGTCCAGCACGCGCGCCCGCTCCTCGGCCGGGAAGTCGCGCAAGGTaGGCAGGATGCGGCGCAGAATGCCCACGCGGTTGTAGCGCACTG +
Preference number: 5 (lower is better)
Translates to: GPARAPAPRPGSRAR*AGCGAECPRGCSAL
Trigger: CAGTGCGCTACAACCGCGTGGGCATTCTGCGCCGCATCCTGCGCACCTTGCGCGACTTCCCGGCCGAGGAGCGGGCGCGCGTGCTGGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS CCA 90 bp AGTAGGCGGCGGCGCGCCCGCGCTCGTCCCAGTGGAAGGCCTCGCTaGCGCGCATATCCTCCAGCAGCCACACGGGTAGCAGGTCGCGCA +
Preference number: 5 (lower is better)
Translates to: SRRRRARARPSGRPR*RAYPPAATRVAGRA
Trigger: TGCGCGACCTGCTACCCGTGTGGCTGCTGGAGGATATGCGCGCCAGCGAGGCCTTCCACTGGGACGAGCGCGGGCGCGCCGCCGCCTACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286918.9
ENST00000557902.1
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS CCA 90 bp GAATGGGGGCAGCGGCAGCTCGTCCAGGGCCTCGGGGAAGCGGCCTaGAGAGATGGCGGTGACCAGCACCTGCATGGCGCGCGCGAAGAG +
Preference number: 5 (lower is better)
Translates to: EWGQRQLVQGLGEAA*RDGGDQHLHGAREE
Trigger: CTCTTCGCGCGCGCCATGCAGGTGCTGGTCACCGCCATCTCTCCAGGCCGCTTCCCCGAGGCCCTGGACGAGCTGCCGCTGCCCCCATTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286918.9
ENST00000559651.1
ENST00000560748.5
CDS CCA 90 bp GCTCCGGGCCTAGCCTTTGCCAGTGAGGTCCAACGGCTGCAGGAATaGGGGCAGCGGCAGCTCGTCCAGGGCCTCGGGGAAGCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: APGLAFASEVQRLQE*GQRQLVQGLGEAAW
Trigger: CCAGGCCGCTTCCCCGAGGCCCTGGACGAGCTGCCGCTGCCCCCATTCCTGCAGCCGTTGGACCTCACTGGCAAAGGCTAGGCCCGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286918.9
ENST00000559651.1
ENST00000560748.5
CDS CCA 90 bp GTCCCACGGCATGCTGGCGGCGGGGCGTTCCTGGGCCTCAAGGCATaGATCCCGCGAAGGCACACCTGGTTCCTGCACCGCGATCACCTA +
Preference number: 5 (lower is better)
Translates to: VPRHAGGGAFLGLKA*IPRRHTWFLHRDHL
Trigger: TAGGTGATCGCGGTGCAGGAACCAGGTGTGCCTTCGCGGGATCCATGCCTTGAGGCCCAGGAACGCCCCGCCGCCAGCATGCCGTGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286918.9
ENST00000557902.1
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS TCA 90 bp CCCAAAATCCAGCGCCTAGGGTGCTCCGGGCCTAGCCTTTGCCAGTaGGGTCCAACGGCTGCAGGAATGGGGGCAGCGGCAGCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: PKIQRLGCSGPSLCQ*GPTAAGMGAAAARP
Trigger: TGGACGAGCTGCCGCTGCCCCCATTCCTGCAGCCGTTGGACCTCACTGGCAAAGGCTAGGCCCGGAGCACCCTAGGCGCTGGATTTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286918.9
ENST00000559651.1
ENST00000560748.5
CDS-3UTR CAA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGCCAGCCACTGGAACTaGTCCTCACCCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPASHWN*SSPSSR
Trigger: GCGGCTGCTGGGTGAGGACAAGTTCCAGTGGCTGGC...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp TCTTCCTACTGTCCAGGCCTCTCCCCCACCTCTCTTGTGTGGCCCAGCACCCTGAAGCCCACTCCGGGCTaGGACAGAGGGCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSYCPGLSPTSLVWPSTLKPTPG*DRGQAW
Trigger: CCAGGCCTGCCCTCTGTCCAAGCCCGGAGTGGGCTT...CAGGGTGCTGGGCCACACAAGAGAGGTGGGGGAGAGGCCTGGACAGTAGGAAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp TCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGAAGGCGAACGACGACTaGCGGCACTGCTTCTGCGCT +
Preference number: 5 (lower is better)
Translates to: SSGRPRPALHDQPGFFILKANDD*RHCFCA
Trigger: AGCGCAGAAGCAGTGCCGCAAGTCGTCGTTCGCCTT...CAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp AGTCAGCACGCAGAGCAAGGCCAGCGAGGCCCAGGCGCCAGGCCTTGGTCCCTGTTCTGCGTGGAGCGATaGCCTTTGGGAAGCCACCAA +
Preference number: 5 (lower is better)
Translates to: SQHAEQGQRGPGARPWSLFCVER*PLGSHQ
Trigger: TTGGTGGCTTCCCAAAGGCAATCGCTCCACGCAGAA...CAGGGACCAAGGCCTGGCGCCTGGGCCTCGCTGGCCTTGCTCTGCGTGCTGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp CTTCAGGGGCTGGACAGCGAGCTGAAGGCCCGAGCCCAGCTGCACCCAGAAAACCCACGTTGGTGCGGGTaGAATTTGACGGCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: LQGLDSELKARAQLHPENPRWCG*NLTAQQ
Trigger: CTGCTGGGCCGTCAAATTCAACCCGCACCAACGTGG...GTTTTCTGGGTGCAGCTGGGCTCGGGCCTTCAGCTCGCTGTCCAGCCCCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS TCA 90 bp GCCGCGTCCACACACACTGACTGGGTCACTATCACTGGCAGTAACTaGGTTAAAGAGAGCGGCGCGGTGCGGGTAGGCTGTGGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: AASTHTDWVTITGSN*VKESGAVRVGCGPW
Trigger: CCACGGGCCACAGCCTACCCGCACCGCGCCGCTCTCTTTAACTCAGTTACTGCCAGTGATAGTGACCCAGTCAGTGTGTGTGGACGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559404.5
CDS CCA 90 bp GGGGCGTTCCTGGGCCTCAAGGCATGGATCCCGCGAAGGCACACCTaGTTCCTGCACCGCGATCACCTAGTTCCGGGGATGTGGGTATAT +
Preference number: 5 (lower is better)
Translates to: GAFLGLKAWIPRRHT*FLHRDHLVPGMWVY
Trigger: ATATACCCACATCCCCGGAACTAGGTGATCGCGGTGCAGGAACCAGGTGTGCCTTCGCGGGATCCATGCCTTGAGGCCCAGGAACGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286918.9
ENST00000557902.1
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS CCA 90 bp GCTCCGTCCCAACCTCCCTACTGCCTTCTTTCAAGGGTAAGCCCTTaGTCACAAGGGGCCTGGGACAGAAGGCAGGCCGCGTCCACACAC +
Preference number: 5 (lower is better)
Translates to: APSQPPYCLLSRVSP*SQGAWDRRQAASTH
Trigger: GTGTGTGGACGCGGCCTGCCTTCTGTCCCAGGCCCCTTGTGACCAAGGGCTTACCCTTGAAAGAAGGCAGTAGGGAGGTTGGGACGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559404.5
CDS-3UTR CAA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGGTGGAGCGATTGCCTTaGGGAAGCCACCAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: SEDLPPPRGPEALMPQELVERLP*GSHQGH
Trigger: GTGGCCTTGGTGGCTTCCCAAAGGCAATCGCTCCAC...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS CCA 90 bp AACTCAGGTCCCCTGCGTCTCAGTTTGGGCTCATTCCAGAATTGGTaGGGACCCCCAACCCACAGGCAATCGAGCTTAGGCCCTGACCCT +
Preference number: 5 (lower is better)
Translates to: NSGPLRLSLGSFQNW*GPPTHRQSSLGPDP
Trigger: AGGGTCAGGGCCTAAGCTCGATTGCCTGTGGGTTGGGGGTCCCCACCAATTCTGGAATGAGCCCAAACTGAGACGCAGGGGACCTGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559404.5
CDS-3UTR CAA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGGGTCCCATACCTCTCTaGATCTCCCCGACTACTAGA +
Preference number: 5 (lower is better)
Translates to: SEDLPPPRGPEALMPQELGPIPL*ISPTTR
Trigger: TCTAGTAGTCGGGGAGATCAAGAGAGGTATGGGACC...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp TCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGCAGATGAGGCAGAGATaGTGCCGTACAGAGATCAAT +
Preference number: 5 (lower is better)
Translates to: SSGRPRPALHDQPGFFILQMRQR*CRTEIN
Trigger: ATTGATCTCTGTACGGCACAATCTCTGCCTCATCTG...CAGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp GGGTGGGGGATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGTGGTGCGGGTTGAATTaGACGGCCCAGCAGAATTCC +
Preference number: 5 (lower is better)
Translates to: GWGIPGTICSCLNTSHRGWCGLN*TAQQNS
Trigger: GGAATTCTGCTGGGCCGTCAAATTCAACCCGCACCA...CCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATCCCCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp GATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGCCTGCCAGTCTCACTGCTGGCTTTaGATGAGCCCAGGAGGGCTC +
Preference number: 5 (lower is better)
Translates to: DTRYNLFMPQHQPPRACQSHCWL*MSPGGL
Trigger: GAGCCCTCCTGGGCTCATCAAAAGCCAGCAGTGAGA...CTGGCAGGCCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS GCA 90 bp CTCCTGGGAGGAGATAGGAGGGTGAAAACAACCTGGAGACCGGTGTaGACCGCACTGCACAGTCTGCCATCCTCTTCAGGTCCCATACCT +
Preference number: 5 (lower is better)
Translates to: LLGGDRRVKTTWRPV*TALHSLPSSSGPIP
Trigger: AGGTATGGGACCTGAAGAGGATGGCAGACTGTGCAGTGCGGTGCACACCGGTCTCCAGGTTGTTTTCACCCTCCTATCTCCTCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
CDS-3UTR CAA 90 bp TGGTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCGCAGAGCTCGTTCTCTaGGCTTCCAGGCCTTTTTAT +
Preference number: 5 (lower is better)
Translates to: WSRTHSSGEVEPSLQPAVAELVL*ASRPFY
Trigger: ATAAAAAGGCCTGGAAGCCAAGAGAACGAGCTCTGC...GACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp TTCTTCCGGCAGGCCCCGCCCTGCACTCCACGACCAGCCTGGGTTCTTCATCCTGATACCCGGTACAATTaGTTCATGCCTCAACACCAG +
Preference number: 5 (lower is better)
Translates to: FFRQAPPCTPRPAWVLHPDTRYN*FMPQHQ
Trigger: CTGGTGTTGAGGCATGAACAAATTGTACCGGGTATC...AGGATGAAGAACCCAGGCTGGTCGTGGAGTGCAGGGCGGGGCCTGCCGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS TCA 90 bp CGAGCCTCAGCTTTATACGTTAGCTCCTGGGAGGAGATAGGAGGGTaGAAACAACCTGGAGACCGGTGTGCACCGCACTGCACAGTCTGC +
Preference number: 5 (lower is better)
Translates to: RASALYVSSWEEIGG*KQPGDRCAPHCTVC
Trigger: GCAGACTGTGCAGTGCGGTGCACACCGGTCTCCAGGTTGTTTTCACCCTCCTATCTCCTCCCAGGAGCTAACGTATAAAGCTGAGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559404.5
CDS-3UTR CAA 90 bp CCACTTCTGTCCTCAAGAACAAGTCCTAGGTCAAGGGAAACAGCACAGCCTGTTGGGGCGGTGGGGCGCTaGAGACAGTGTTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: PLLSSRTSPRSRETAQPVGAVGR*RQCFPA
Trigger: TGCAGGGAAACACTGTCTCAAGCGCCCCACCGCCCC...AACAGGCTGTGCTGTTTCCCTTGACCTAGGACTTGTTCTTGAGGACAGAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp TGGTCCAGGACACACAGCAGCGGGGAAGTGGAACCCTCACTCCAGCCTGCAGTCGCCTTTCCTTCCATCTaGATTGCAGTGGTGATTACA +
Preference number: 5 (lower is better)
Translates to: WSRTHSSGEVEPSLQPAVAFPSI*IAVVIT
Trigger: TGTAATCACCACTGCAATCAAGATGGAAGGAAAGGC...GACTGCAGGCTGGAGTGAGGGTTCCACTTCCCCGCTGCTGTGTGTCCTGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS TCA 90 bp AAACATGTTTGCTTACACGTTAGCTCCTGGGAGGAGATAGGAGGGTaGAAACAACCTGGAGACCGGTGTGCACCGCACTGCACAGTCTGC +
Preference number: 5 (lower is better)
Translates to: KHVCLHVSSWEEIGG*KQPGDRCAPHCTVC
Trigger: GCAGACTGTGCAGTGCGGTGCACACCGGTCTCCAGGTTGTTTTCACCCTCCTATCTCCTCCCAGGAGCTAACGTGTAAGCAAACATGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559651.1
CDS-3UTR CAA 90 bp TCTGAGGACCTGCCACCTCCCAGAGGACCGGAGGCCCTGATGCCCCAAGAATTGGCCTTTTTGTATCCTTaGAATTTCCAGCCATGTAAA +
Preference number: 5 (lower is better)
Translates to: SEDLPPPRGPEALMPQELAFLYP*NFQPCK
Trigger: TTTACATGGCTGGAAATTCAAAGGATACAAAAAGGC...CAATTCTTGGGGCATCAGGGCCTCCGGTCCTCTGGGAGGTGGCAGGTCCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp GGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTGGCCAAGGCAGAGGTTaGTCCAAGGTCACCCCCAGA +
Preference number: 5 (lower is better)
Translates to: GVKRNKFSTCDQQLVIVVGQGRG*SKVTPR
Trigger: TCTGGGGGTGACCTTGGACAAACCTCTGCCTTGGCC...AACCACTATGACCAGCTGCTGATCACAAGTAGAGAACTTGTTTCTTTTCACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp GATACCCGGTACAATTTGTTCATGCCTCAACACCAGCCACCGCGGGCCTGCCAGTACGGAATTTTAAAGTaGGTGAGGAAGTCGACAGAA +
Preference number: 5 (lower is better)
Translates to: DTRYNLFMPQHQPPRACQYGILK*VRKSTE
Trigger: TTCTGTCGACTTCCTCACCAACTTTAAAATTCCGTA...CTGGCAGGCCCGCGGTGGCTGGTGTTGAGGCATGAACAAATTGTACCGGGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp TGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATTCTCCCCCACCTCTCTaGTGTGGCCCAGCACCCTGG +
Preference number: 5 (lower is better)
Translates to: CAVQRSIYIKCRYNALKNSPPPL*CGPAPW
Trigger: CCAGGGTGCTGGGCCACACAAGAGAGGTGGGGGAGA...ATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGCCAGCCACTGGAACTaGTCCTCACCCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVASHWN*SSPSSR
Trigger: GCGGCTGCTGGGTGAGGACAAGTTCCAGTGGCTGGC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CAA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAAGCCCTCCTGCCCACGTaGGTGCGGGTTGAATTTGAC +
Preference number: 5 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKALLPT*VRVEFD
Trigger: GTCAAATTCAACCCGCACCAACGTGGGCAGGAGGGC...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCAGTAATGCGCGTACGCTaGGTGGTCGTGCACGAGCGC +
Preference number: 5 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPVMRVR*VVVHER
Trigger: GCGCTCGTGCACGACCACCAAGCGTACGCGCATTAC...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CAA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCAAAGGCGAACGACGACTaGCGGCACTGCTTCTGCGCT +
Preference number: 5 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPKANDD*RHCFCA
Trigger: AGCGCAGAAGCAGTGCCGCAAGTCGTCGTTCGCCTT...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CAA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCTGGGCCTCTGGCATaGTGGAGGCTGACCTATAGA +
Preference number: 5 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVPGPLA*WRLTYR
Trigger: TCTATAGGTCAGCCTCCACAATGCCAGAGGCCCAGG...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp GGGGTGAAAAGAAACAAGTTCTCTACTTGTGATCAGCAGCTGGTCATAGTGGTTGAGACAACCCAAACGTaGGAGGGTATTTGTTGTAAA +
Preference number: 5 (lower is better)
Translates to: GVKRNKFSTCDQQLVIVVETTQT*EGICCK
Trigger: TTTACAACAAATACCCTCCAACGTTTGGGTTGTCTC...AACCACTATGACCAGCTGCTGATCACAAGTAGAGAACTTGTTTCTTTTCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGGTCCCATACCTCTCTaGATCTCCCCGACTACTAGA +
Preference number: 5 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVGPIPL*ISPTTR
Trigger: TCTAGTAGTCGGGGAGATCAAGAGAGGTATGGGACC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559651.1
CDS-3UTR CAA 90 bp AGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCCCAAAAACAGCCTGGCATTaGGGAACAGCCATGTTAACG +
Preference number: 5 (lower is better)
Translates to: RSIYIKCRYNALKNSFVPKTAWH*GTAMLT
Trigger: CGTTAACATGGCTGTTCCCAAATGCCAGGCTGTTTT...TGGGACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCGTCTCTAACTACTCTTaGTTATCAAGGCTGGTTGAG +
Preference number: 5 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVVSNYS*LSRLVE
Trigger: CTCAACCAGCCTTGATAACAAAGAGTAGTTAGAGAC...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp TTGTGCCGTACAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAAGGAGTATATGCCTTTTaGTATCCTTTGAATTTCCAG +
Preference number: 5 (lower is better)
Translates to: LCRTEINIYKVPVQRSEKGVYAF*YPLNFQ
Trigger: CTGGAAATTCAAAGGATACAAAAAGGCATATACTCC...TTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTGTACGGCACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS-3UTR CAA 90 bp CAGAGATCAATATATATAAAGTGCCGGTACAACGCTCTGAAAAATAGTTTTGTCTGTTATCAAGGCTGGTaGAGTCAAATATCACAAAGT +
Preference number: 5 (lower is better)
Translates to: QRSIYIKCRYNALKNSFVCYQGW*SQISQS
Trigger: ACTTTGTGATATTTGACTCAACCAGCCTTGATAACA...GACAAAACTATTTTTCAGAGCGTTGTACCGGCACTTTATATATATTGATCTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286918.9
CDS GCA 72 bp GGGAGCCGCGCAGCAGCGGAAGCCGGCACTGGGCGGTaGGAGCGCGCGCCGCGGGAACGTGGCCAGCAGGTA +
Preference number: 6 (lower is better)
Translates to: GSRAAAEAGTGR*ERAPRERGQQV
Trigger: TACCTGCTGGCCACGTTCCCGCGGCGCGCGCTCGCACCGCCCAGTGCCGGCTTCCGCTGCTGCGCGGCTCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 72 bp CCACGTGCAGCGACGTGCCACCGCCCTCCACGCGGCTaGAGCCACGCCGGTCCAGCACGCGCGCCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: PRAATCHRPPRG*SHAGPARAPAP
Trigger: AGGAGCGGGCGCGCGTGCTGGACCGGCGTGGCTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCACGTGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 72 bp CGGGGCGCGCCAGCTCACAGGCCACGTGCAGCGACGTaGCACCGCCCTCCACGCGGCTGCAGCCACGCCGGT +
Preference number: 6 (lower is better)
Translates to: RGAPAHRPRAAT*HRPPRGCSHAG
Trigger: ACCGGCGTGGCTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCACGTGGCCTGTGAGCTGGCGCGCCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 72 bp GATGCGGCGCAGAATGCCCACGCGGTTGTAGCGCACTaGCAGCGCCACGTGCGGCCCGGGAGCCGCGCAGCA +
Preference number: 6 (lower is better)
Translates to: DAAQNAHAVVAH*QRHVRPGSRAA
Trigger: TGCTGCGCGGCTCCCGGGCCGCACGTGGCGCTGGCAGTGCGCTACAACCGCGTGGGCATTCTGCGCCGCATC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 72 bp CGCGCGCCCGCTCCTCGGCCGGGAAGTCGCGCAAGGTaGGCAGGATGCGGCGCAGAATGCCCACGCGGTTGT +
Preference number: 6 (lower is better)
Translates to: RAPAPRPGSRAR*AGCGAECPRGC
Trigger: ACAACCGCGTGGGCATTCTGCGCCGCATCCTGCGCACCTTGCGCGACTTCCCGGCCGAGGAGCGGGCGCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 72 bp GGGAAGCGGCCTGGAGAGATGGCGGTGACCAGCACCTaGATGGCGCGCGCGAAGAGCGAGGGCGGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: GKRPGEMAVTST*MARAKSEGGAR
Trigger: CCTGGCGCCGCCCTCGCTCTTCGCGCGCGCCATGCAGGTGCTGGTCACCGCCATCTCTCCAGGCCGCTTCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286918.9
ENST00000559651.1
ENST00000560748.5
CDS GCA 72 bp GGTCGCGCACCGCCTGGTAGAAGGCGAACGACGACTTaGGGCACTGCTTCTGCGCTCGCGAGCGCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: GRAPPGRRRTTT*GTASALASAPR
Trigger: GCGCGGCGCGCTCGCGAGCGCAGAAGCAGTGCCGCAAGTCGTCGTTCGCCTTCTACCAGGCGGTGCGCGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286918.9
ENST00000557902.1
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS CCA 72 bp CGGCGCGCCCGCGCTCGTCCCAGTGGAAGGCCTCGCTaGCGCGCATATCCTCCAGCAGCCACACGGGTAGCA +
Preference number: 6 (lower is better)
Translates to: RRARARPSGRPR*RAYPPAATRVA
Trigger: TGCTACCCGTGTGGCTGCTGGAGGATATGCGCGCCAGCGAGGCCTTCCACTGGGACGAGCGCGGGCGCGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286918.9
ENST00000557902.1
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS CCA 72 bp CGGCACTGGGCGGTGCGAGCGCGCGCCGCGGGAACGTaGCCAGCAGGTAATGCGCGTACGCTTGGTGGTCGT +
Preference number: 6 (lower is better)
Translates to: RHWAVRARAAGT*PAGNARTLGGR
Trigger: ACGACCACCAAGCGTACGCGCATTACCTGCTGGCCACGTTCCCGCGGCGCGCGCTCGCACCGCCCAGTGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286918.9
ENST00000557902.1
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS CCA 72 bp CAGCGGCAGCTCGTCCAGGGCCTCGGGGAAGCGGCCTaGAGAGATGGCGGTGACCAGCACCTGCATGGCGCG +
Preference number: 6 (lower is better)
Translates to: QRQLVQGLGEAA*RDGGDQHLHGA
Trigger: CGCGCCATGCAGGTGCTGGTCACCGCCATCTCTCCAGGCCGCTTCCCCGAGGCCCTGGACGAGCTGCCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286918.9
ENST00000559651.1
ENST00000560748.5
CDS CAA 90 bp GAGCGCGCGCCGCGGGAACGTGGCCAGCAGGTAATGCGCGTACGCTaGGTGGTCGTGCACGAGCGCGTAGAGCAGCGCCTCAGAGGGCGA +
Preference number: 6 (lower is better)
Translates to: ERAPRERGQQVMRVR*VVVHERVEQRLRGR
Trigger: TCGCCCTCTGAGGCGCTGCTCTACGCGCTCGTGCACGACCACCAAGCGTACGCGCATTACCTGCTGGCCACGTTCCCGCGGCGCGCGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286918.9
ENST00000557902.1
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 72 bp GCTCCTCGGCCGGGAAGTCGCGCAAGGTGCGCAGGATaGGGCGCAGAATGCCCACGCGGTTGTAGCGCACTG +
Preference number: 6 (lower is better)
Translates to: APRPGSRARCAG*GAECPRGCSAL
Trigger: CAGTGCGCTACAACCGCGTGGGCATTCTGCGCCGCATCCTGCGCACCTTGCGCGACTTCCCGGCCGAGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS GCA 72 bp GGAAGTCGCGCAAGGTGCGCAGGATGCGGCGCAGAATaGCCACGCGGTTGTAGCGCACTGCCAGCGCCACGT +
Preference number: 6 (lower is better)
Translates to: GSRARCAGCGAE*PRGCSALPAPR
Trigger: ACGTGGCGCTGGCAGTGCGCTACAACCGCGTGGGCATTCTGCGCCGCATCCTGCGCACCTTGCGCGACTTCC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS CAA 72 bp CCGCGGGAACGTGGCCAGCAGGTAATGCGCGTACGCTaGGTGGTCGTGCACGAGCGCGTAGAGCAGCGCCTC +
Preference number: 6 (lower is better)
Translates to: PRERGQQVMRVR*VVVHERVEQRL
Trigger: GAGGCGCTGCTCTACGCGCTCGTGCACGACCACCAAGCGTACGCGCATTACCTGCTGGCCACGTTCCCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286918.9
ENST00000557902.1
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS CCA 72 bp CTAGCCTTTGCCAGTGAGGTCCAACGGCTGCAGGAATaGGGGCAGCGGCAGCTCGTCCAGGGCCTCGGGGAA +
Preference number: 6 (lower is better)
Translates to: LAFASEVQRLQE*GQRQLVQGLGE
Trigger: TTCCCCGAGGCCCTGGACGAGCTGCCGCTGCCCCCATTCCTGCAGCCGTTGGACCTCACTGGCAAAGGCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286918.9
ENST00000559651.1
ENST00000560748.5
CDS CCA 72 bp CTGGGCCTCAAGGCATGGATCCCGCGAAGGCACACCTaGTTCCTGCACCGCGATCACCTAGTTCCGGGGATG +
Preference number: 6 (lower is better)
Translates to: LGLKAWIPRRHT*FLHRDHLVPGM
Trigger: CATCCCCGGAACTAGGTGATCGCGGTGCAGGAACCAGGTGTGCCTTCGCGGGATCCATGCCTTGAGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286918.9
ENST00000557902.1
ENST00000559404.5
ENST00000559651.1
ENST00000560748.5
CDS CAA 90 bp GGCTCCGTCCCAACCTCCCTACTGCCTTCTTTCAAGGGTAAGCCCTaGGTCACAAGGGGCCTGGGACAGAAGGCAGGCCGCGTCCACACA +
Preference number: 6 (lower is better)
Translates to: GSVPTSLLPSFKGKP*VTRGLGQKAGRVHT
Trigger: TGTGTGGACGCGGCCTGCCTTCTGTCCCAGGCCCCTTGTGACCAAGGGCTTACCCTTGAAAGAAGGCAGTAGGGAGGTTGGGACGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559404.5
CDS CAA 72 bp CCAACCTCCCTACTGCCTTCTTTCAAGGGTAAGCCCTaGGTCACAAGGGGCCTGGGACAGAAGGCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: PTSLLPSFKGKP*VTRGLGQKAGR
Trigger: GCGGCCTGCCTTCTGTCCCAGGCCCCTTGTGACCAAGGGCTTACCCTTGAAAGAAGGCAGTAGGGAGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559404.5
CDS GCA 72 bp AGCCACGGCAGAGCCAGGCCTAGAACTCAGGTCCCCTaGGTCTCAGTTTGGGCTCATTCCAGAATTGGTGGG +
Preference number: 6 (lower is better)
Translates to: SHGRARPRTQVP*VSVWAHSRIGG
Trigger: CCCACCAATTCTGGAATGAGCCCAAACTGAGACGCAGGGGACCTGAGTTCTAGGCCTGGCTCTGCCGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557902.1
ENST00000559404.5
CDS CCA 72 bp CCCCTGCGTCTCAGTTTGGGCTCATTCCAGAATTGGTaGGGACCCCCAACCCACAGGCAATCGAGCTTAGGC +
Preference number: 6 (lower is better)
Translates to: PLRLSLGSFQNW*GPPTHRQSSLG
Trigger: GCCTAAGCTCGATTGCCTGTGGGTTGGGGGTCCCCACCAATTCTGGAATGAGCCCAAACTGAGACGCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559404.5
CDS TCA 72 bp TGCTTACACGTTAGCTCCTGGGAGGAGATAGGAGGGTaGAAACAACCTGGAGACCGGTGTGCACCGCACTGC +
Preference number: 6 (lower is better)
Translates to: CLHVSSWEEIGG*KQPGDRCAPHC
Trigger: GCAGTGCGGTGCACACCGGTCTCCAGGTTGTTTTCACCCTCCTATCTCCTCCCAGGAGCTAACGTGTAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559651.1
CDS GCA 72 bp GGAGATAGGAGGGTGAAAACAACCTGGAGACCGGTGTaGACCGCACTGCACAGTCTGCCATCCTCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: GDRRVKTTWRPV*TALHSLPSSSG
Trigger: ACCTGAAGAGGATGGCAGACTGTGCAGTGCGGTGCACACCGGTCTCCAGGTTGTTTTCACCCTCCTATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286918.9
ENST00000559404.5
ENST00000559651.1
CDS GCA 72 bp CTGGGGCGTGGCACCAGCCCTCTATCCAAACATGTTTaGTTACACGTTAGCTCCTGGGAGGAGATAGGAGGG +
Preference number: 6 (lower is better)
Translates to: LGRGTSPLSKHV*LHVSSWEEIGG
Trigger: CCCTCCTATCTCCTCCCAGGAGCTAACGTGTAAGCAAACATGTTTGGATAGAGGGCTGGTGCCACGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559651.1
CDS TCA 72 bp GCTTTATACGTTAGCTCCTGGGAGGAGATAGGAGGGTaGAAACAACCTGGAGACCGGTGTGCACCGCACTGC +
Preference number: 6 (lower is better)
Translates to: ALYVSSWEEIGG*KQPGDRCAPHC
Trigger: GCAGTGCGGTGCACACCGGTCTCCAGGTTGTTTTCACCCTCCTATCTCCTCCCAGGAGCTAACGTATAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286918.9
ENST00000559404.5
CDS TCA 72 bp TCACAGTCCCTGGCCGAGCCTCAGCTTTATCTCTCTTaGTCTCCCCGACTACTAGATGAAGCGGGTACTGCC +
Preference number: 6 (lower is better)
Translates to: SQSLAEPQLYLS*SPRLLDEAGTA
Trigger: GGCAGTACCCGCTTCATCTAGTAGTCGGGGAGATCAAGAGAGATAAAGCTGAGGCTCGGCCAGGGACTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557902.1
CDS TCA 72 bp ACACACACTGACTGGGTCACTATCACTGGCAGTAACTaGGTTAAAGAGAGCGGCGCGGTGCGGGTAGGCTGT +
Preference number: 6 (lower is better)
Translates to: THTDWVTITGSN*VKESGAVRVGC
Trigger: ACAGCCTACCCGCACCGCGCCGCTCTCTTTAACTCAGTTACTGCCAGTGATAGTGACCCAGTCAGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559404.5