RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD66 (Homo sapiens)

Ensembl gene IDs: ENSG00000230062

Ensembl transcript IDs: ENST00000445060.1, ENST00000565422.2, ENST00000565422.3

Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCACCCACCCCGTCACCTGACCTTATGCTCCATTCCTCTCTAGTGTaGATGCTCTGCCTAGCCAGGCCACTCATCCCTGCACTCCACTAT +
Preference number: 1 (lower is better)
Translates to: SPTPSPDLMLHSSLV*MLCLARPLIPALHY
Trigger: ATAGTGGAGTGCAGGGATGAGTGGCCTGGCTAGGCAGAGCATTCACACTAGAGAGGAATGGAGCATAAGGTCAGGTGACGGGGTGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR GCA 90 bp GCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCTCACACTCTTCTaGTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTT +
Preference number: 1 (lower is better)
Translates to: ASVSACDSPDELTLF*LPSSLWSPTPSPDL
Trigger: AAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGCAGAAGAGTGTGAGCTCATCAGGGGAGTCACAAGCTGAAACAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR CCA 90 bp GCTGGGATCATATTTCATGTTGATCCCTGGTCACTAGGGAGGGGCTaGGATTACTTAGAGAGAGTCAGTAGAGGACAGCCAAGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: AGIIFHVDPWSLGRG*DYLERVSRGQPRAG
Trigger: TCCTGCCCTTGGCTGTCCTCTACTGACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAATATGATCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR TCA 90 bp AGCACCCCTCCTGCATTTCAGTTATGCTGGGATCATATTTCATGTTaGTCCCTGGTCACTAGGGAGGGGCTGGGATTACTTAGAGAGAGT +
Preference number: 1 (lower is better)
Translates to: STPPAFQLCWDHISC*SLVTREGLGLLRES
Trigger: ACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAATATGATCCCAGCATAACTGAAATGCAGGAGGGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR CCA 90 bp CTCCTGCATTTCAGTTATGCTGGGATCATATTTCATGTTGATCCCTaGTCACTAGGGAGGGGCTGGGATTACTTAGAGAGAGTCAGTAGA +
Preference number: 1 (lower is better)
Translates to: LLHFSYAGIIFHVDP*SLGRGWDYLERVSR
Trigger: TCTACTGACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAATATGATCCCAGCATAACTGAAATGCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR TCA 90 bp CAGCTGATTCAGTATGGGGATCAGGGAAGAAGTCTGAAGCGTGGGTaGGAGGTGAAGAAGTGGAGACAATTACATAGATTAGTTTCCTCA +
Preference number: 1 (lower is better)
Translates to: QLIQYGDQGRSLKRG*EVKKWRQLHRLVSS
Trigger: TGAGGAAACTAATCTATGTAATTGTCTCCACTTCTTCACCTCTCACCCACGCTTCAGACTTCTTCCCTGATCCCCATACTGAATCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR CCA 90 bp CCTCACCTTCTCACATATACACACAACCTATGCACATTTCCAAGTTaGTGCCTTCACTCTAAATCAACAGTTTTTCTCCCTCCTTCATTA +
Preference number: 1 (lower is better)
Translates to: PHLLTYTHNLCTFPS*CLHSKSTVFLPPSL
Trigger: TAATGAAGGAGGGAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTTGTGTGTATATGTGAGAAGGTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR GCA 90 bp GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTGGCAAGCACCCCTCCTaGATTTCAGTTATGCTGGGA +
Preference number: 2 (lower is better)
Translates to: ACLVHCGHPPRHLTLCSIGKHPS*ISVMLG
Trigger: TCCCAGCATAACTGAAATGCAGGAGGGGTGCTTGCC...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR GCA 90 bp CAGCCCATGTGGACAGCACCTAATGACAGGTCCATGGGCAGAAGCCAGGTGGGTATGGAAAGGCCACCATaGCTAACAGCCTCATTTCTG +
Preference number: 2 (lower is better)
Translates to: QPMWTAPNDRSMGRSQVGMERPP*LTASFL
Trigger: CAGAAATGAGGCTGTTAGGCATGGTGGCCTTTCCAT...ACCCACCTGGCTTCTGCCCATGGACCTGTCATTAGGTGCTGTCCACATGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565422.2
3UTR-3UTR TCA 90 bp TGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTCCTGATCATATTTCATGTTaGTCCCTGGTCACTAGGGAG +
Preference number: 2 (lower is better)
Translates to: CLVHCGHPPRHLTLCSIPDHISC*SLVTRE
Trigger: CTCCCTAGTGACCAGGGATCAACATGAAATATGATC...AGGAATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR CCA 90 bp GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTACAGCTGATTCAGTATaGGGATCAGGGAAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: ACLVHCGHPPRHLTLCSITADSV*GSGKKS
Trigger: AGACTTCTTCCCTGATCCCCATACTGAATCAGCTGT...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR GCA 90 bp CAAAGGACAGCAAACTCACTAGTCCCTCACCCTAAGCTGGAAGTGACCTTTCAACCCACGCAGTACCACTaGCAACTCCTCTACTACACA +
Preference number: 2 (lower is better)
Translates to: QRTANSLVPHPKLEVTFQPTQYH*QLLYYT
Trigger: TGTGTAGTAGAGGAGTTGGCAGTGGTACTGCGTGGG...TTGAAAGGTCACTTCCAGCTTAGGGTGAGGGACTAGTGAGTTTGCTGTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR TCA 90 bp GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTGACTCACACGTGATGTaGCTGACCTTTATTGTTTTT +
Preference number: 2 (lower is better)
Translates to: ACLVHCGHPPRHLTLCSIDSHVM*LTFIVF
Trigger: AAAAACAATAAAGGTCAGTCACATCACGTGTGAGTC...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR TCA 90 bp TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATGACTTGAGTGACAGCTaGTTCAGTATGGGGATCAGG +
Preference number: 2 (lower is better)
Translates to: LLAQHCLPTFLGNSTPHYDLSDS*FSMGIR
Trigger: CCTGATCCCCATACTGAATCAGCTGTCACTCAAGTC...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR CCA 90 bp AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCGCACTCCCCACTATTTaGAGGCAAGCACCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: NLCTFPSWCLHSKSTVFLALPTI*RQAPLL
Trigger: CAGGAGGGGTGCTTGCCTCCAAATAGTGGGGAGTGC...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR TCA 90 bp TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCAGTCTGAAGCGTGGGTaGGAGGTGAAGAAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: YTNKLLMHLFQLVTPLMSSLKRG*EVKKWR
Trigger: TCTCCACTTCTTCACCTCTCACCCACGCTTCAGACT...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR CCA 90 bp CATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCCCTCCTTCATTTTCATGTTGATCCCTaGTCACTAGGGAGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: HFQVGAFTLNQQFFSLLHFHVDP*SLGRGW
Trigger: CCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAA...ATGAAGGAGGGAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR TCA 90 bp GTTTTGTATGAGGCCAATGGTGAGTATGTGACTTGCTTAAAGGTACTTGGAAAAAGCGTGGGTGAGAGGTaGAGAAGTGGAGACAATTAC +
Preference number: 2 (lower is better)
Translates to: VLYEANGEYVTCLKVLGKSVGER*RSGDNY
Trigger: GTAATTGTCTCCACTTCTTCACCTCTCACCCACGCT...TTTTCCAAGTACCTTTAAGCAAGTCACATACTCACCATTGGCCTCATACAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR CCA 90 bp AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCTCACTAGGGAGGGGCTaGGATTACTTAGAGAGAGTC +
Preference number: 2 (lower is better)
Translates to: NLCTFPSWCLHSKSTVFLSLGRG*DYLERV
Trigger: GACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGA...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR GCA 90 bp ACGCAGTACCACTGCCAACTCCTCTACTACACAAATAAATTGCTAATGCATCTGGACCTTTATTGTTTTTaGTGGCTCAACACTGTCTGC +
Preference number: 2 (lower is better)
Translates to: TQYHCQLLYYTNKLLMHLDLYCF*WLNTVC
Trigger: GCAGACAGTGTTGAGCCAGCAAAAACAATAAAGGTC...CAGATGCATTAGCAATTTATTTGTGTAGTAGAGGAGTTGGCAGTGGTACTGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR GCA 90 bp TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCTGGCTCAACACTGTCTaGCTACTTTTCTTGGTAATA +
Preference number: 2 (lower is better)
Translates to: YTNKLLMHLFQLVTPLMSWLNTV*LLFLVI
Trigger: TATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCA...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR GCA 90 bp TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCCCTGCATTTCAGTTATaGTGGGATCATATTTCATGT +
Preference number: 2 (lower is better)
Translates to: YTNKLLMHLFQLVTPLMSPAFQL*WDHISC
Trigger: ACATGAAATATGATCCCAGCATAACTGAAATGCAGG...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR CAA 90 bp TGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTCCTAGCACTCCCCACTATTaGGAGGCAAGCACCCCTCCT +
Preference number: 3 (lower is better)
Translates to: CLVHCGHPPRHLTLCSIPSTPHY*EASTPP
Trigger: AGGAGGGGTGCTTGCCTCCAAATAGTGGGGAGTGCT...AGGAATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR TCA 72 bp CCGTCACCTGACCTTATGCTCCATTCCTCTCTAGTGTaGATGCTCTGCCTAGCCAGGCCACTCATCCCTGCA +
Preference number: 3 (lower is better)
Translates to: PSPDLMLHSSLV*MLCLARPLIPA
Trigger: TGCAGGGATGAGTGGCCTGGCTAGGCAGAGCATTCACACTAGAGAGGAATGGAGCATAAGGTCAGGTGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR GCA 72 bp TCAGCTTGTGACTCCCCTGATGAGCTCACACTCTTCTaGTTGCCTAGTTCACTGTGGTCACCCACCCCGTCA +
Preference number: 3 (lower is better)
Translates to: SACDSPDELTLF*LPSSLWSPTPS
Trigger: TGACGGGGTGGGTGACCACAGTGAACTAGGCAAGCAGAAGAGTGTGAGCTCATCAGGGGAGTCACAAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR CCA 72 bp ATATTTCATGTTGATCCCTGGTCACTAGGGAGGGGCTaGGATTACTTAGAGAGAGTCAGTAGAGGACAGCCA +
Preference number: 3 (lower is better)
Translates to: IFHVDPWSLGRG*DYLERVSRGQP
Trigger: TGGCTGTCCTCTACTGACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR CCA 72 bp TTCAGTTATGCTGGGATCATATTTCATGTTGATCCCTaGTCACTAGGGAGGGGCTGGGATTACTTAGAGAGA +
Preference number: 3 (lower is better)
Translates to: FSYAGIIFHVDP*SLGRGWDYLER
Trigger: TCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAATATGATCCCAGCATAACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR CAA 90 bp AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCGTCTGCCTACTTTTCTaGGTAATAGCACTCCCCACT +
Preference number: 3 (lower is better)
Translates to: NLCTFPSWCLHSKSTVFLVCLLF*VIALPT
Trigger: AGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGAC...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR-3UTR CAA 90 bp AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCCAGAGGAAGGACATGTaGTCCTTCCCCAAGATTTTA +
Preference number: 3 (lower is better)
Translates to: NLCTFPSWCLHSKSTVFLQRKDM*SFPKIL
Trigger: TAAAATCTTGGGGAAGGACAACATGTCCTTCCTCTG...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445060.1
3UTR GCA 72 bp ACCTTTCAATCTTCAGACCACACCATGTCTTTCCTCTaGCTAGTCACTCTCTGTCTTGTATTAGTGTTATTT +
Preference number: 3 (lower is better)
Translates to: TFQSSDHTMSFL*LVTLCLVLVLF
Trigger: AAATAACACTAATACAAGACAGAGAGTGACTAGGCAGAGGAAAGACATGGTGTGGTCTGAAGATTGAAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR TCA 90 bp GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTGCTTCTGCTGCAAAATaGGCTGGGGTCCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: ACLVHCGHPPRHLTLCSIASAAK*AGVQPT
Trigger: TGTGGGCTGGACCCCAGCTCATTTTGCAGCAGAAGC...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CCA 90 bp TGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTCCTGCACTCCCCACTATTTaGAGGCAAGCACCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CLVHCGHPPRHLTLCSIPALPTI*RQAPLL
Trigger: CAGGAGGGGTGCTTGCCTCCAAATAGTGGGGAGTGC...AGGAATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTATGGCCTGCTTCTGCTaGAAAATGAGCTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ACLVHCGHPPRHLTLCSIMACFC*KMSWGP
Trigger: TGGACCCCAGCTCATTTTGCAGCAGAAGCAGGCCAT...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CCA 90 bp GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTTTTCATGTTGATCCCTaGTCACTAGGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ACLVHCGHPPRHLTLCSIFHVDP*SLGRGW
Trigger: CCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAA...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTGACCTTTATTGTTTTTaGTGGCTCAACACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: ACLVHCGHPPRHLTLCSIDLYCF*WLNTVC
Trigger: GCAGACAGTGTTGAGCCAGCAAAAACAATAAAGGTC...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR TCA 90 bp TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATCATTCCTCTCTAGTGTaGATGCTCTGCCTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLAQHCLPTFLGNSTPHYHSSLV*MLCLAR
Trigger: CCTGGCTAGGCAGAGCATTCACACTAGAGAGGAATG...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATGCGTCGATGGCAGCGTaGAATGCATGGAGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LLAQHCLPTFLGNSTPHYASMAA*NAWRVL
Trigger: CAAAACTCTCCATGCATTGCACGCTGCCATCGACGC...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CCA 90 bp TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATTGCTGCAAAATGAGCTaGGGTCCAGCCCACACTAGT +
Preference number: 4 (lower is better)
Translates to: LLAQHCLPTFLGNSTPHYCCKMS*GPAHTS
Trigger: ACTAGTGTGGGCTGGACCCCAGCTCATTTTGCAGCA...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATCTGTCCATAGATCTGTaGAATCCTCTTCGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: LLAQHCLPTFLGNSTPHYLSIDL*NPLRCV
Trigger: GACACACCGAAGAGGATTGCACAGATCTATGGACAG...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CCA 90 bp TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCTTGCCTAGTTCACTGTaGTCACCCACCCCGTCACCT +
Preference number: 4 (lower is better)
Translates to: YTNKLLMHLFQLVTPLMSLPSSL*SPTPSP
Trigger: AGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAA...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR TCA 90 bp GACCCTAAGGAATGTCAGCATTTAAAAGGCACGCAAGAACATATCATAAGATTTACCCACCCCGTCACCTaGCCTTATGCTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: DPKECQHLKGTQEHIIRFTHPVT*PYAPFL
Trigger: GAGGAATGGAGCATAAGGTCAGGTGACGGGGTGGGT...AAATCTTATGATATGTTCTTGCGTGCCTTTTAAATGCTGACATTCCTTAGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR TCA 90 bp AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCAGTCTGAAGCGTGGGTaGGAGGTGAAGAAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NLCTFPSWCLHSKSTVFLSLKRG*EVKKWR
Trigger: TCTCCACTTCTTCACCTCTCACCCACGCTTCAGACT...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR TCA 90 bp TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCGACTTGAGTGACAGCTaGTTCAGTATGGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: YTNKLLMHLFQLVTPLMSDLSDS*FSMGIR
Trigger: CCTGATCCCCATACTGAATCAGCTGTCACTCAAGTC...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp CAAAGGACAGCAAACTCACTAGTCCCTCACCCTAAGCTGGAAGTGACCTTTCAATGGCTCAACACTGTCTaGCTACTTTTCTTGGTAATA +
Preference number: 4 (lower is better)
Translates to: QRTANSLVPHPKLEVTFQWLNTV*LLFLVI
Trigger: TATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCA...TTGAAAGGTCACTTCCAGCTTAGGGTGAGGGACTAGTGAGTTTGCTGTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATACCCACGCAGTACCACTaGCAACTCCTCTACTACACA +
Preference number: 4 (lower is better)
Translates to: LYLHHLAQEPTYSKCESIPTQYH*QLLYYT
Trigger: TGTGTAGTAGAGGAGTTGGCAGTGGTACTGCGTGGG...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CCA 90 bp TATTTATGTAAACAAGTTATTTCGTCTCCCACACAGTTAACCTTCTTGATGTCCAGTCAGGGGCGTCGATaGCAGCGTGCAATGCATGGA +
Preference number: 4 (lower is better)
Translates to: YLCKQVISSPTQLTFLMSSQGRR*QRAMHG
Trigger: TCCATGCATTGCACGCTGCCATCGACGCCCCTGACT...GGACATCAAGAAGGTTAACTGTGTGGGAGACGAAATAACTTGTTTACATAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR TCA 90 bp AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCAGCGTGGGTGAGAGGTaGAGAAGTGGAGACAATTAC +
Preference number: 4 (lower is better)
Translates to: NLCTFPSWCLHSKSTVFLSVGER*RSGDNY
Trigger: GTAATTGTCTCCACTTCTTCACCTCTCACCCACGCT...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CCA 90 bp CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATATCACTAGGGAGGGGCTaGGATTACTTAGAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LYLHHLAQEPTYSKCESISLGRG*DYLERV
Trigger: GACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGA...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CCA 90 bp ACGCAGTACCACTGCCAACTCCTCTACTACACAAATAAATTGCTAATGCATCTGGAGAGGTTTATCACTTaGGGGGCTGAATCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: TQYHCQLLYYTNKLLMHLERFIT*GAESKA
Trigger: AGCTTTTGATTCAGCCCCCCAAGTGATAAACCTCTC...CAGATGCATTAGCAATTTATTTGTGTAGTAGAGGAGTTGGCAGTGGTACTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR TCA 90 bp AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCACCCTAAGCTGGAAGTaGCCTTTCAATCTTCAGACC +
Preference number: 4 (lower is better)
Translates to: NLCTFPSWCLHSKSTVFLTLSWK*PFNLQT
Trigger: GGTCTGAAGATTGAAAGGTCACTTCCAGCTTAGGGT...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp GTTTTGTATGAGGCCAATGGTGAGTATGTGACTTGCTTAAAGGTACTTGGAAAATCCCTTTTCCAGAAATaGCACACAGGCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VLYEANGEYVTCLKVLGKSLFQK*HTGFLS
Trigger: GGACAGAAAGCCTGTGTGGCATTTCTGGAAAAGGGA...TTTTCCAAGTACCTTTAAGCAAGTCACATACTCACCATTGGCCTCATACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp GATAAAACAAGGGAGAAGAGTTTCAGGAATATTAAATACCGAATTAAGTGGAGGGGCAAGCACCCCTCCTaGATTTCAGTTATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DKTREKSFRNIKYRIKWRGKHPS*ISVMLG
Trigger: TCCCAGCATAACTGAAATGCAGGAGGGGTGCTTGCC...CCTCCACTTAATTCGGTATTTAATATTCCTGAAACTCTTCTCCCTTGTTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCGATGGCAGCGTGCAATaGATGGAGAGTTTTGAGTAT +
Preference number: 4 (lower is better)
Translates to: NLCTFPSWCLHSKSTVFLDGSVQ*MESFEY
Trigger: ATACTCAAAACTCTCCATGCATTGCACGCTGCCATC...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATAACCATGTCTTTCCTCTaGCTAGTCACTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LYLHHLAQEPTYSKCESITMSFL*LVTLCL
Trigger: AAGACAGAGAGTGACTAGGCAGAGGAAAGACATGGT...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CCA 90 bp CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATAACAGCTGATTCAGTATaGGGATCAGGGAAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LYLHHLAQEPTYSKCESITADSV*GSGKKS
Trigger: AGACTTCTTCCCTGATCCCCATACTGAATCAGCTGT...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR TCA 90 bp GACCCTAAGGAATGTCAGCATTTAAAAGGCACGCAAGAACATATCATAAGATTTGATCATATTTCATGTTaGTCCCTGGTCACTAGGGAG +
Preference number: 4 (lower is better)
Translates to: DPKECQHLKGTQEHIIRFDHISC*SLVTRE
Trigger: CTCCCTAGTGACCAGGGATCAACATGAAATATGATC...AAATCTTATGATATGTTCTTGCGTGCCTTTTAAATGCTGACATTCCTTAGGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR TCA 90 bp CATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCCCTCCTTCATGACTCACACGTGATGTaGCTGACCTTTATTGTTTTT +
Preference number: 4 (lower is better)
Translates to: HFQVGAFTLNQQFFSLLHDSHVM*LTFIVF
Trigger: AAAAACAATAAAGGTCAGTCACATCACGTGTGAGTC...ATGAAGGAGGGAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CCA 90 bp CATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCCCTCCTTCATTTGAGTATATTCAGATaGCCTGCTTCTGCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: HFQVGAFTLNQQFFSLLHLSIFR*PASAAK
Trigger: TTTTGCAGCAGAAGCAGGCCATCTGAATATACTCAA...ATGAAGGAGGGAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR TCA 90 bp GATAAAACAAGGGAGAAGAGTTTCAGGAATATTAAATACCGAATTAAGTGGAGGATGCATGGAGAGTTTTaGGTATATTCAGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: DKTREKSFRNIKYRIKWRMHGEF*VYSDGL
Trigger: CAGGCCATCTGAATATACTCAAAACTCTCCATGCAT...CCTCCACTTAATTCGGTATTTAATATTCCTGAAACTCTTCTCCCTTGTTTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR TCA 90 bp CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATAGGTCTAGGCTTCTTTTaGAGTTCTCTTATATCCTTT +
Preference number: 4 (lower is better)
Translates to: LYLHHLAQEPTYSKCESIGLGFF*SSLISF
Trigger: AAAGGATATAAGAGAACTTCAAAAGAAGCCTAGACC...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCCCTGCATTTCAGTTATaGTGGGATCATATTTCATGT +
Preference number: 4 (lower is better)
Translates to: NLCTFPSWCLHSKSTVFLPAFQL*WDHISC
Trigger: ACATGAAATATGATCCCAGCATAACTGAAATGCAGG...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATAGGTGAGTATGTGACTTaGTTAAAGGTACTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LYLHHLAQEPTYSKCESIGEYVT*LKVLGK
Trigger: TTTTCCAAGTACCTTTAAGCAAGTCACATACTCACC...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CCA 90 bp TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCGAAAATGATCACATATaGTCTAGGCTTCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: YTNKLLMHLFQLVTPLMSENDHI*SRLLLK
Trigger: CTTCAAAAGAAGCCTAGACCATATGTGATCATTTTC...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR GCA 90 bp GACCCTAAGGAATGTCAGCATTTAAAAGGCACGCAAGAACATATCATAAGATTTACATTTCCAAGTTGGTaGCTTCACTCTAAATCAACA +
Preference number: 4 (lower is better)
Translates to: DPKECQHLKGTQEHIIRFTFPSW*LHSKST
Trigger: TGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGT...AAATCTTATGATATGTTCTTGCGTGCCTTTTAAATGCTGACATTCCTTAGGGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS CCA 90 bp GCATCCCAGTCTTCATCACGCTCATCCAGAGGCAGCCCCTTCTGCTaGGCAGCGCAACGGTGGTCCTGGCACTCGGGCTCTGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: ASQSSSRSSRGSPFC*AAQRWSWHSGSAFS
Trigger: GGAAAAGGCAGAGCCCGAGTGCCAGGACCACCGTTGCGCTGCCCAGCAGAAGGGGCTGCCTCTGGATGAGCGTGATGAAGACTGGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS GCA 90 bp TTGGCATCCCAGTCTTCATCACGCTCATCCAGAGGCAGCCCCTTCTaGTGGGCAGCGCAACGGTGGTCCTGGCACTCGGGCTCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: LASQSSSRSSRGSPF*WAAQRWSWHSGSAF
Trigger: AAAGGCAGAGCCCGAGTGCCAGGACCACCGTTGCGCTGCCCAGCAGAAGGGGCTGCCTCTGGATGAGCGTGATGAAGACTGGGATGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CCA 90 bp TCACGCTCATCCAGAGGCAGCCCCTTCTGCTGGGCAGCGCAACGGTaGTCCTGGCACTCGGGCTCTGCCTTTTCCAGAAATGCCACACAG +
Preference number: 5 (lower is better)
Translates to: SRSSRGSPFCWAAQR*SWHSGSAFSRNATQ
Trigger: CTGTGTGGCATTTCTGGAAAAGGCAGAGCCCGAGTGCCAGGACCACCGTTGCGCTGCCCAGCAGAAGGGGCTGCCTCTGGATGAGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS GCA 90 bp CGGTGTGTCTCCAAAGAAGTCAGGGGCGTCGATGGCAGCGTGCAATaGATGGAGAGTTTTGAGTATATTCAGATGGCCTGCTTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RCVSKEVRGVDGSVQ*MESFEYIQMACFCC
Trigger: GCAGCAGAAGCAGGCCATCTGAATATACTCAAAACTCTCCATGCATTGCACGCTGCCATCGACGCCCCTGACTTCTTTGGAGACACACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445060.1
ENST00000565422.3
CDS CCA 90 bp AGTTTTGAGTATATTCAGATGGCCTGCTTCTGCTGCAAAATGAGCTaGGGTCCAGCCCACACTAGTAACCAGGCAGGGCCTGGCTCCATA +
Preference number: 5 (lower is better)
Translates to: SFEYIQMACFCCKMS*GPAHTSNQAGPGSI
Trigger: TATGGAGCCAGGCCCTGCCTGGTTACTAGTGTGGGCTGGACCCCAGCTCATTTTGCAGCAGAAGCAGGCCATCTGAATATACTCAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445060.1
ENST00000565422.3
CDS GCA 90 bp CTCTTCGGTGTGTCTCCAAAGAAGTCAGGGGCGTCGATGGCAGCGTaGAATGCATGGAGAGTTTTGAGTATATTCAGATGGCCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LFGVSPKKSGASMAA*NAWRVLSIFRWPAS
Trigger: AGAAGCAGGCCATCTGAATATACTCAAAACTCTCCATGCATTGCACGCTGCCATCGACGCCCCTGACTTCTTTGGAGACACACCGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445060.1
ENST00000565422.3
CDS CCA 90 bp GTGTCTCCAAAGAAGTCAGGGGCGTCGATGGCAGCGTGCAATGCATaGAGAGTTTTGAGTATATTCAGATGGCCTGCTTCTGCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: VSPKKSGASMAACNA*RVLSIFRWPASAAK
Trigger: TTTTGCAGCAGAAGCAGGCCATCTGAATATACTCAAAACTCTCCATGCATTGCACGCTGCCATCGACGCCCCTGACTTCTTTGGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445060.1
ENST00000565422.3
CDS-3UTR CAA 90 bp GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTCACACATATACAGTTTaGTATGAGGCCAATGGTGAG +
Preference number: 5 (lower is better)
Translates to: ACLVHCGHPPRHLTLCSIHTYTV*YEANGE
Trigger: CTCACCATTGGCCTCATACAAAACTGTATATGTGTG...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CAA 90 bp TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCAGCACTCCCCACTATTaGGAGGCAAGCACCCCTCCT +
Preference number: 5 (lower is better)
Translates to: YTNKLLMHLFQLVTPLMSSTPHY*EASTPP
Trigger: AGGAGGGGTGCTTGCCTCCAAATAGTGGGGAGTGCT...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CAA 90 bp TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATGTCTGCCTACTTTTCTaGGTAATAGCACTCCCCACT +
Preference number: 5 (lower is better)
Translates to: LLAQHCLPTFLGNSTPHYVCLLF*VIALPT
Trigger: AGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGAC...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CAA 90 bp TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATAATGCATGGAGAGTTTaGAGTATATTCAGATGGCCT +
Preference number: 5 (lower is better)
Translates to: LLAQHCLPTFLGNSTPHYNAWRV*SIFRWP
Trigger: AGGCCATCTGAATATACTCAAAACTCTCCATGCATT...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CAA 90 bp GATAAAACAAGGGAGAAGAGTTTCAGGAATATTAAATACCGAATTAAGTGGAGGCAGAGGAAGGACATGTaGTCCTTCCCCAAGATTTTA +
Preference number: 5 (lower is better)
Translates to: DKTREKSFRNIKYRIKWRQRKDM*SFPKIL
Trigger: TAAAATCTTGGGGAAGGACAACATGTCCTTCCTCTG...CCTCCACTTAATTCGGTATTTAATATTCCTGAAACTCTTCTCCCTTGTTTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS-3UTR CAA 90 bp TATTTATGTAAACAAGTTATTTCGTCTCCCACACAGTTAACCTTCTTGATGTCCTGGTCTAGGCTTCTTTaGAAGTTCTCTTATATCCTT +
Preference number: 5 (lower is better)
Translates to: YLCKQVISSPTQLTFLMSWSRLL*KFSYIL
Trigger: AAGGATATAAGAGAACTTCAAAAGAAGCCTAGACCA...GGACATCAAGAAGGTTAACTGTGTGGGAGACGAAATAACTTGTTTACATAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445060.1
CDS CCA 72 bp GGCAGCCCCTTCTGCTGGGCAGCGCAACGGTGGTCCTaGCACTCGGGCTCTGCCTTTTCCAGAAATGCCACA +
Preference number: 6 (lower is better)
Translates to: GSPFCWAAQRWS*HSGSAFSRNAT
Trigger: TGTGGCATTTCTGGAAAAGGCAGAGCCCGAGTGCCAGGACCACCGTTGCGCTGCCCAGCAGAAGGGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CCA 72 bp TCCAGAGGCAGCCCCTTCTGCTGGGCAGCGCAACGGTaGTCCTGGCACTCGGGCTCTGCCTTTTCCAGAAAT +
Preference number: 6 (lower is better)
Translates to: SRGSPFCWAAQR*SWHSGSAFSRN
Trigger: ATTTCTGGAAAAGGCAGAGCCCGAGTGCCAGGACCACCGTTGCGCTGCCCAGCAGAAGGGGCTGCCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CCA 72 bp TATATTCAGATGGCCTGCTTCTGCTGCAAAATGAGCTaGGGTCCAGCCCACACTAGTAACCAGGCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: YIQMACFCCKMS*GPAHTSNQAGP
Trigger: AGGCCCTGCCTGGTTACTAGTGTGGGCTGGACCCCAGCTCATTTTGCAGCAGAAGCAGGCCATCTGAATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445060.1
ENST00000565422.3
CDS TCA 72 bp TTGAGTATATTCAGATGGCCTGCTTCTGCTGCAAAATaGGCTGGGGTCCAGCCCACACTAGTAACCAGGCAG +
Preference number: 6 (lower is better)
Translates to: LSIFRWPASAAK*AGVQPTLVTRQ
Trigger: CTGCCTGGTTACTAGTGTGGGCTGGACCCCAGCTCATTTTGCAGCAGAAGCAGGCCATCTGAATATACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445060.1
ENST00000565422.3
CDS GCA 72 bp TCCAAAGAAGTCAGGGGCGTCGATGGCAGCGTGCAATaGATGGAGAGTTTTGAGTATATTCAGATGGCCTGC +
Preference number: 6 (lower is better)
Translates to: SKEVRGVDGSVQ*MESFEYIQMAC
Trigger: GCAGGCCATCTGAATATACTCAAAACTCTCCATGCATTGCACGCTGCCATCGACGCCCCTGACTTCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445060.1
ENST00000565422.3
CDS CAA 90 bp CTCATTTCTGGCACCAGGGAAAGTTCCTTGCCAGAAAACATAAGGTaGAGTTCTCATACTCTCCTCCCCTTGGTATTGCTGGGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: LISGTRESSLPENIR*SSHTLLPLVLLGLV
Trigger: CACCAGGCCCAGCAATACCAAGGGGAGGAGAGTATGAGAACTCAACCTTATGTTTTCTGGCAAGGAACTTTCCCTGGTGCCAGAAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CAA 90 bp GCCACCATGCCTAACAGCCTCATTTCTGGCACCAGGGAAAGTTCCTaGCCAGAAAACATAAGGTTGAGTTCTCATACTCTCCTCCCCTTG +
Preference number: 6 (lower is better)
Translates to: ATMPNSLISGTRESS*PENIRLSSHTLLPL
Trigger: CAAGGGGAGGAGAGTATGAGAACTCAACCTTATGTTTTCTGGCAAGGAACTTTCCCTGGTGCCAGAAATGAGGCTGTTAGGCATGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS GCA 72 bp GTGTCTCCAAAGAAGTCAGGGGCGTCGATGGCAGCGTaGAATGCATGGAGAGTTTTGAGTATATTCAGATGG +
Preference number: 6 (lower is better)
Translates to: VSPKKSGASMAA*NAWRVLSIFRW
Trigger: CCATCTGAATATACTCAAAACTCTCCATGCATTGCACGCTGCCATCGACGCCCCTGACTTCTTTGGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445060.1
ENST00000565422.3
CDS CCA 72 bp CACCTCCATTTGCCCTTTGATTGCAGCCCAGTGAAGTaGGGTCCGGTCATTCCAGTCTACATCTTTGTAGTT +
Preference number: 6 (lower is better)
Translates to: HLHLPFDCSPVK*GPVIPVYIFVV
Trigger: AACTACAAAGATGTAGACTGGAATGACCGGACCCCACTTCACTGGGCTGCAATCAAAGGGCAAATGGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CAA 72 bp AGCTGTAGTCTCCTGCAGCCACAGCTTGGTGAAGCTTaGTCATGTCTGACATTTTGGCCAATTCCATGGCAG +
Preference number: 6 (lower is better)
Translates to: SCSLLQPQLGEA*SCLTFWPIPWQ
Trigger: CTGCCATGGAATTGGCCAAAATGTCAGACATGACAAAGCTTCACCAAGCTGTGGCTGCAGGAGACTACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CAA 72 bp GGCACCAGGGAAAGTTCCTTGCCAGAAAACATAAGGTaGAGTTCTCATACTCTCCTCCCCTTGGTATTGCTG +
Preference number: 6 (lower is better)
Translates to: GTRESSLPENIR*SSHTLLPLVLL
Trigger: CAGCAATACCAAGGGGAGGAGAGTATGAGAACTCAACCTTATGTTTTCTGGCAAGGAACTTTCCCTGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CAA 90 bp TCTTCACTAAGCTGTAGTCTCCTGCAGCCACAGCTTGGTGAAGCTTaGTCATGTCTGACATTTTGGCCAATTCCATGGCAGAAAACAAAG +
Preference number: 6 (lower is better)
Translates to: SSLSCSLLQPQLGEA*SCLTFWPIPWQKTK
Trigger: CTTTGTTTTCTGCCATGGAATTGGCCAAAATGTCAGACATGACAAAGCTTCACCAAGCTGTGGCTGCAGGAGACTACAGCTTAGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CAA 90 bp CCCAGTGAAGTGGGGTCCGGTCATTCCAGTCTACATCTTTGTAGTTaGGGTCACAGAGACCTTTCTTCAAAATCTTCTTCACTAAGCTGT +
Preference number: 6 (lower is better)
Translates to: PSEVGSGHSSLHLCS*GHRDLSSKSSSLSC
Trigger: ACAGCTTAGTGAAGAAGATTTTGAAGAAAGGTCTCTGTGACCCAAACTACAAAGATGTAGACTGGAATGACCGGACCCCACTTCACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CCA 72 bp GAAGCTTTGTCATGTCTGACATTTTGGCCAATTCCATaGCAGAAAACAAAGAATCTGAAACTCTGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: EALSCLTFWPIP*QKTKNLKLWAG
Trigger: CCCTGCCCAGAGTTTCAGATTCTTTGTTTTCTGCCATGGAATTGGCCAAAATGTCAGACATGACAAAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CCA 72 bp TGGGGTCCGGTCATTCCAGTCTACATCTTTGTAGTTTaGGTCACAGAGACCTTTCTTCAAAATCTTCTTCAC +
Preference number: 6 (lower is better)
Translates to: WGPVIPVYIFVV*VTETFLQNLLH
Trigger: GTGAAGAAGATTTTGAAGAAAGGTCTCTGTGACCCAAACTACAAAGATGTAGACTGGAATGACCGGACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CAA 72 bp GTGGGGTCCGGTCATTCCAGTCTACATCTTTGTAGTTaGGGTCACAGAGACCTTTCTTCAAAATCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: VGSGHSSLHLCS*GHRDLSSKSSS
Trigger: TGAAGAAGATTTTGAAGAAAGGTCTCTGTGACCCAAACTACAAAGATGTAGACTGGAATGACCGGACCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3
CDS CCA 72 bp CCACAGCTTGGTGAAGCTTTGTCATGTCTGACATTTTaGCCAATTCCATGGCAGAAAACAAAGAATCTGAAA +
Preference number: 6 (lower is better)
Translates to: PQLGEALSCLTF*PIPWQKTKNLK
Trigger: TTTCAGATTCTTTGTTTTCTGCCATGGAATTGGCCAAAATGTCAGACATGACAAAGCTTCACCAAGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565422.3