Pregenerated sensors for ANKRD66 (Homo sapiens)
Ensembl gene IDs: ENSG00000230062Ensembl transcript IDs: ENST00000445060.1, ENST00000565422.2, ENST00000565422.3
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACCCACCCCGTCACCTGACCTTATGCTCCATTCCTCTCTAGTGTaGATGCTCTGCCTAGCCAGGCCACTCATCCCTGCACTCCACTAT | + |
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Preference number: 1 (lower is better) Translates to: SPTPSPDLMLHSSLV*MLCLARPLIPALHY Trigger: ATAGTGGAGTGCAGGGATGAGTGGCCTGGCTAGGCAGAGCATTCACACTAGAGAGGAATGGAGCATAAGGTCAGGTGACGGGGTGGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR GCA 90 bp | GCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCTCACACTCTTCTaGTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTT | + |
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Preference number: 1 (lower is better) Translates to: ASVSACDSPDELTLF*LPSSLWSPTPSPDL Trigger: AAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGCAGAAGAGTGTGAGCTCATCAGGGGAGTCACAAGCTGAAACAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR CCA 90 bp | GCTGGGATCATATTTCATGTTGATCCCTGGTCACTAGGGAGGGGCTaGGATTACTTAGAGAGAGTCAGTAGAGGACAGCCAAGGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: AGIIFHVDPWSLGRG*DYLERVSRGQPRAG Trigger: TCCTGCCCTTGGCTGTCCTCTACTGACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAATATGATCCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR TCA 90 bp | AGCACCCCTCCTGCATTTCAGTTATGCTGGGATCATATTTCATGTTaGTCCCTGGTCACTAGGGAGGGGCTGGGATTACTTAGAGAGAGT | + |
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Preference number: 1 (lower is better) Translates to: STPPAFQLCWDHISC*SLVTREGLGLLRES Trigger: ACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAATATGATCCCAGCATAACTGAAATGCAGGAGGGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR CCA 90 bp | CTCCTGCATTTCAGTTATGCTGGGATCATATTTCATGTTGATCCCTaGTCACTAGGGAGGGGCTGGGATTACTTAGAGAGAGTCAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: LLHFSYAGIIFHVDP*SLGRGWDYLERVSR Trigger: TCTACTGACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAATATGATCCCAGCATAACTGAAATGCAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR TCA 90 bp | CAGCTGATTCAGTATGGGGATCAGGGAAGAAGTCTGAAGCGTGGGTaGGAGGTGAAGAAGTGGAGACAATTACATAGATTAGTTTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: QLIQYGDQGRSLKRG*EVKKWRQLHRLVSS Trigger: TGAGGAAACTAATCTATGTAATTGTCTCCACTTCTTCACCTCTCACCCACGCTTCAGACTTCTTCCCTGATCCCCATACTGAATCAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR CCA 90 bp | CCTCACCTTCTCACATATACACACAACCTATGCACATTTCCAAGTTaGTGCCTTCACTCTAAATCAACAGTTTTTCTCCCTCCTTCATTA | + |
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Preference number: 1 (lower is better) Translates to: PHLLTYTHNLCTFPS*CLHSKSTVFLPPSL Trigger: TAATGAAGGAGGGAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTTGTGTGTATATGTGAGAAGGTGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR GCA 90 bp | GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTGGCAAGCACCCCTCCTaGATTTCAGTTATGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: ACLVHCGHPPRHLTLCSIGKHPS*ISVMLG Trigger: TCCCAGCATAACTGAAATGCAGGAGGGGTGCTTGCC...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCATGTGGACAGCACCTAATGACAGGTCCATGGGCAGAAGCCAGGTGGGTATGGAAAGGCCACCATaGCTAACAGCCTCATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QPMWTAPNDRSMGRSQVGMERPP*LTASFL Trigger: CAGAAATGAGGCTGTTAGGCATGGTGGCCTTTCCAT...ACCCACCTGGCTTCTGCCCATGGACCTGTCATTAGGTGCTGTCCACATGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565422.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTCCTGATCATATTTCATGTTaGTCCCTGGTCACTAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: CLVHCGHPPRHLTLCSIPDHISC*SLVTRE Trigger: CTCCCTAGTGACCAGGGATCAACATGAAATATGATC...AGGAATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR CCA 90 bp | GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTACAGCTGATTCAGTATaGGGATCAGGGAAGAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: ACLVHCGHPPRHLTLCSITADSV*GSGKKS Trigger: AGACTTCTTCCCTGATCCCCATACTGAATCAGCTGT...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGACAGCAAACTCACTAGTCCCTCACCCTAAGCTGGAAGTGACCTTTCAACCCACGCAGTACCACTaGCAACTCCTCTACTACACA | + |
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Preference number: 2 (lower is better) Translates to: QRTANSLVPHPKLEVTFQPTQYH*QLLYYT Trigger: TGTGTAGTAGAGGAGTTGGCAGTGGTACTGCGTGGG...TTGAAAGGTCACTTCCAGCTTAGGGTGAGGGACTAGTGAGTTTGCTGTCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR TCA 90 bp | GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTGACTCACACGTGATGTaGCTGACCTTTATTGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: ACLVHCGHPPRHLTLCSIDSHVM*LTFIVF Trigger: AAAAACAATAAAGGTCAGTCACATCACGTGTGAGTC...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATGACTTGAGTGACAGCTaGTTCAGTATGGGGATCAGG | + |
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Preference number: 2 (lower is better) Translates to: LLAQHCLPTFLGNSTPHYDLSDS*FSMGIR Trigger: CCTGATCCCCATACTGAATCAGCTGTCACTCAAGTC...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR CCA 90 bp | AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCGCACTCCCCACTATTTaGAGGCAAGCACCCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: NLCTFPSWCLHSKSTVFLALPTI*RQAPLL Trigger: CAGGAGGGGTGCTTGCCTCCAAATAGTGGGGAGTGC...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR TCA 90 bp | TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCAGTCTGAAGCGTGGGTaGGAGGTGAAGAAGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: YTNKLLMHLFQLVTPLMSSLKRG*EVKKWR Trigger: TCTCCACTTCTTCACCTCTCACCCACGCTTCAGACT...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR CCA 90 bp | CATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCCCTCCTTCATTTTCATGTTGATCCCTaGTCACTAGGGAGGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: HFQVGAFTLNQQFFSLLHFHVDP*SLGRGW Trigger: CCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAA...ATGAAGGAGGGAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR TCA 90 bp | GTTTTGTATGAGGCCAATGGTGAGTATGTGACTTGCTTAAAGGTACTTGGAAAAAGCGTGGGTGAGAGGTaGAGAAGTGGAGACAATTAC | + |
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Preference number: 2 (lower is better) Translates to: VLYEANGEYVTCLKVLGKSVGER*RSGDNY Trigger: GTAATTGTCTCCACTTCTTCACCTCTCACCCACGCT...TTTTCCAAGTACCTTTAAGCAAGTCACATACTCACCATTGGCCTCATACAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR CCA 90 bp | AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCTCACTAGGGAGGGGCTaGGATTACTTAGAGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: NLCTFPSWCLHSKSTVFLSLGRG*DYLERV Trigger: GACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGA...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR GCA 90 bp | ACGCAGTACCACTGCCAACTCCTCTACTACACAAATAAATTGCTAATGCATCTGGACCTTTATTGTTTTTaGTGGCTCAACACTGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: TQYHCQLLYYTNKLLMHLDLYCF*WLNTVC Trigger: GCAGACAGTGTTGAGCCAGCAAAAACAATAAAGGTC...CAGATGCATTAGCAATTTATTTGTGTAGTAGAGGAGTTGGCAGTGGTACTGCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR GCA 90 bp | TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCTGGCTCAACACTGTCTaGCTACTTTTCTTGGTAATA | + |
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Preference number: 2 (lower is better) Translates to: YTNKLLMHLFQLVTPLMSWLNTV*LLFLVI Trigger: TATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCA...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR GCA 90 bp | TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCCCTGCATTTCAGTTATaGTGGGATCATATTTCATGT | + |
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Preference number: 2 (lower is better) Translates to: YTNKLLMHLFQLVTPLMSPAFQL*WDHISC Trigger: ACATGAAATATGATCCCAGCATAACTGAAATGCAGG...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR CAA 90 bp | TGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTCCTAGCACTCCCCACTATTaGGAGGCAAGCACCCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: CLVHCGHPPRHLTLCSIPSTPHY*EASTPP Trigger: AGGAGGGGTGCTTGCCTCCAAATAGTGGGGAGTGCT...AGGAATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR TCA 72 bp | CCGTCACCTGACCTTATGCTCCATTCCTCTCTAGTGTaGATGCTCTGCCTAGCCAGGCCACTCATCCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: PSPDLMLHSSLV*MLCLARPLIPA Trigger: TGCAGGGATGAGTGGCCTGGCTAGGCAGAGCATTCACACTAGAGAGGAATGGAGCATAAGGTCAGGTGACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR GCA 72 bp | TCAGCTTGTGACTCCCCTGATGAGCTCACACTCTTCTaGTTGCCTAGTTCACTGTGGTCACCCACCCCGTCA | + |
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Preference number: 3 (lower is better) Translates to: SACDSPDELTLF*LPSSLWSPTPS Trigger: TGACGGGGTGGGTGACCACAGTGAACTAGGCAAGCAGAAGAGTGTGAGCTCATCAGGGGAGTCACAAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR CCA 72 bp | ATATTTCATGTTGATCCCTGGTCACTAGGGAGGGGCTaGGATTACTTAGAGAGAGTCAGTAGAGGACAGCCA | + |
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Preference number: 3 (lower is better) Translates to: IFHVDPWSLGRG*DYLERVSRGQP Trigger: TGGCTGTCCTCTACTGACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR CCA 72 bp | TTCAGTTATGCTGGGATCATATTTCATGTTGATCCCTaGTCACTAGGGAGGGGCTGGGATTACTTAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: FSYAGIIFHVDP*SLGRGWDYLER Trigger: TCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAATATGATCCCAGCATAACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR CAA 90 bp | AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCGTCTGCCTACTTTTCTaGGTAATAGCACTCCCCACT | + |
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Preference number: 3 (lower is better) Translates to: NLCTFPSWCLHSKSTVFLVCLLF*VIALPT Trigger: AGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGAC...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR-3UTR CAA 90 bp | AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCCAGAGGAAGGACATGTaGTCCTTCCCCAAGATTTTA | + |
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Preference number: 3 (lower is better) Translates to: NLCTFPSWCLHSKSTVFLQRKDM*SFPKIL Trigger: TAAAATCTTGGGGAAGGACAACATGTCCTTCCTCTG...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| 3UTR GCA 72 bp | ACCTTTCAATCTTCAGACCACACCATGTCTTTCCTCTaGCTAGTCACTCTCTGTCTTGTATTAGTGTTATTT | + |
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Preference number: 3 (lower is better) Translates to: TFQSSDHTMSFL*LVTLCLVLVLF Trigger: AAATAACACTAATACAAGACAGAGAGTGACTAGGCAGAGGAAAGACATGGTGTGGTCTGAAGATTGAAAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR TCA 90 bp | GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTGCTTCTGCTGCAAAATaGGCTGGGGTCCAGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: ACLVHCGHPPRHLTLCSIASAAK*AGVQPT Trigger: TGTGGGCTGGACCCCAGCTCATTTTGCAGCAGAAGC...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CCA 90 bp | TGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTCCTGCACTCCCCACTATTTaGAGGCAAGCACCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: CLVHCGHPPRHLTLCSIPALPTI*RQAPLL Trigger: CAGGAGGGGTGCTTGCCTCCAAATAGTGGGGAGTGC...AGGAATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTATGGCCTGCTTCTGCTaGAAAATGAGCTGGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ACLVHCGHPPRHLTLCSIMACFC*KMSWGP Trigger: TGGACCCCAGCTCATTTTGCAGCAGAAGCAGGCCAT...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CCA 90 bp | GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTTTTCATGTTGATCCCTaGTCACTAGGGAGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ACLVHCGHPPRHLTLCSIFHVDP*SLGRGW Trigger: CCAGCCCCTCCCTAGTGACCAGGGATCAACATGAAA...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTGACCTTTATTGTTTTTaGTGGCTCAACACTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ACLVHCGHPPRHLTLCSIDLYCF*WLNTVC Trigger: GCAGACAGTGTTGAGCCAGCAAAAACAATAAAGGTC...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR TCA 90 bp | TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATCATTCCTCTCTAGTGTaGATGCTCTGCCTAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLAQHCLPTFLGNSTPHYHSSLV*MLCLAR Trigger: CCTGGCTAGGCAGAGCATTCACACTAGAGAGGAATG...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATGCGTCGATGGCAGCGTaGAATGCATGGAGAGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: LLAQHCLPTFLGNSTPHYASMAA*NAWRVL Trigger: CAAAACTCTCCATGCATTGCACGCTGCCATCGACGC...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CCA 90 bp | TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATTGCTGCAAAATGAGCTaGGGTCCAGCCCACACTAGT | + |
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Preference number: 4 (lower is better) Translates to: LLAQHCLPTFLGNSTPHYCCKMS*GPAHTS Trigger: ACTAGTGTGGGCTGGACCCCAGCTCATTTTGCAGCA...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATCTGTCCATAGATCTGTaGAATCCTCTTCGGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LLAQHCLPTFLGNSTPHYLSIDL*NPLRCV Trigger: GACACACCGAAGAGGATTGCACAGATCTATGGACAG...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CCA 90 bp | TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCTTGCCTAGTTCACTGTaGTCACCCACCCCGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: YTNKLLMHLFQLVTPLMSLPSSL*SPTPSP Trigger: AGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAA...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR TCA 90 bp | GACCCTAAGGAATGTCAGCATTTAAAAGGCACGCAAGAACATATCATAAGATTTACCCACCCCGTCACCTaGCCTTATGCTCCATTCCTC | + |
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Preference number: 4 (lower is better) Translates to: DPKECQHLKGTQEHIIRFTHPVT*PYAPFL Trigger: GAGGAATGGAGCATAAGGTCAGGTGACGGGGTGGGT...AAATCTTATGATATGTTCTTGCGTGCCTTTTAAATGCTGACATTCCTTAGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR TCA 90 bp | AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCAGTCTGAAGCGTGGGTaGGAGGTGAAGAAGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: NLCTFPSWCLHSKSTVFLSLKRG*EVKKWR Trigger: TCTCCACTTCTTCACCTCTCACCCACGCTTCAGACT...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR TCA 90 bp | TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCGACTTGAGTGACAGCTaGTTCAGTATGGGGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: YTNKLLMHLFQLVTPLMSDLSDS*FSMGIR Trigger: CCTGATCCCCATACTGAATCAGCTGTCACTCAAGTC...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | CAAAGGACAGCAAACTCACTAGTCCCTCACCCTAAGCTGGAAGTGACCTTTCAATGGCTCAACACTGTCTaGCTACTTTTCTTGGTAATA | + |
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Preference number: 4 (lower is better) Translates to: QRTANSLVPHPKLEVTFQWLNTV*LLFLVI Trigger: TATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCA...TTGAAAGGTCACTTCCAGCTTAGGGTGAGGGACTAGTGAGTTTGCTGTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATACCCACGCAGTACCACTaGCAACTCCTCTACTACACA | + |
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Preference number: 4 (lower is better) Translates to: LYLHHLAQEPTYSKCESIPTQYH*QLLYYT Trigger: TGTGTAGTAGAGGAGTTGGCAGTGGTACTGCGTGGG...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CCA 90 bp | TATTTATGTAAACAAGTTATTTCGTCTCCCACACAGTTAACCTTCTTGATGTCCAGTCAGGGGCGTCGATaGCAGCGTGCAATGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: YLCKQVISSPTQLTFLMSSQGRR*QRAMHG Trigger: TCCATGCATTGCACGCTGCCATCGACGCCCCTGACT...GGACATCAAGAAGGTTAACTGTGTGGGAGACGAAATAACTTGTTTACATAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR TCA 90 bp | AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCAGCGTGGGTGAGAGGTaGAGAAGTGGAGACAATTAC | + |
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Preference number: 4 (lower is better) Translates to: NLCTFPSWCLHSKSTVFLSVGER*RSGDNY Trigger: GTAATTGTCTCCACTTCTTCACCTCTCACCCACGCT...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CCA 90 bp | CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATATCACTAGGGAGGGGCTaGGATTACTTAGAGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LYLHHLAQEPTYSKCESISLGRG*DYLERV Trigger: GACTCTCTCTAAGTAATCCCAGCCCCTCCCTAGTGA...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CCA 90 bp | ACGCAGTACCACTGCCAACTCCTCTACTACACAAATAAATTGCTAATGCATCTGGAGAGGTTTATCACTTaGGGGGCTGAATCAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQYHCQLLYYTNKLLMHLERFIT*GAESKA Trigger: AGCTTTTGATTCAGCCCCCCAAGTGATAAACCTCTC...CAGATGCATTAGCAATTTATTTGTGTAGTAGAGGAGTTGGCAGTGGTACTGCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR TCA 90 bp | AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCACCCTAAGCTGGAAGTaGCCTTTCAATCTTCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: NLCTFPSWCLHSKSTVFLTLSWK*PFNLQT Trigger: GGTCTGAAGATTGAAAGGTCACTTCCAGCTTAGGGT...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | GTTTTGTATGAGGCCAATGGTGAGTATGTGACTTGCTTAAAGGTACTTGGAAAATCCCTTTTCCAGAAATaGCACACAGGCTTTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLYEANGEYVTCLKVLGKSLFQK*HTGFLS Trigger: GGACAGAAAGCCTGTGTGGCATTTCTGGAAAAGGGA...TTTTCCAAGTACCTTTAAGCAAGTCACATACTCACCATTGGCCTCATACAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | GATAAAACAAGGGAGAAGAGTTTCAGGAATATTAAATACCGAATTAAGTGGAGGGGCAAGCACCCCTCCTaGATTTCAGTTATGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DKTREKSFRNIKYRIKWRGKHPS*ISVMLG Trigger: TCCCAGCATAACTGAAATGCAGGAGGGGTGCTTGCC...CCTCCACTTAATTCGGTATTTAATATTCCTGAAACTCTTCTCCCTTGTTTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCGATGGCAGCGTGCAATaGATGGAGAGTTTTGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NLCTFPSWCLHSKSTVFLDGSVQ*MESFEY Trigger: ATACTCAAAACTCTCCATGCATTGCACGCTGCCATC...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATAACCATGTCTTTCCTCTaGCTAGTCACTCTCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYLHHLAQEPTYSKCESITMSFL*LVTLCL Trigger: AAGACAGAGAGTGACTAGGCAGAGGAAAGACATGGT...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CCA 90 bp | CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATAACAGCTGATTCAGTATaGGGATCAGGGAAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYLHHLAQEPTYSKCESITADSV*GSGKKS Trigger: AGACTTCTTCCCTGATCCCCATACTGAATCAGCTGT...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR TCA 90 bp | GACCCTAAGGAATGTCAGCATTTAAAAGGCACGCAAGAACATATCATAAGATTTGATCATATTTCATGTTaGTCCCTGGTCACTAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DPKECQHLKGTQEHIIRFDHISC*SLVTRE Trigger: CTCCCTAGTGACCAGGGATCAACATGAAATATGATC...AAATCTTATGATATGTTCTTGCGTGCCTTTTAAATGCTGACATTCCTTAGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR TCA 90 bp | CATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCCCTCCTTCATGACTCACACGTGATGTaGCTGACCTTTATTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HFQVGAFTLNQQFFSLLHDSHVM*LTFIVF Trigger: AAAAACAATAAAGGTCAGTCACATCACGTGTGAGTC...ATGAAGGAGGGAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CCA 90 bp | CATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCCCTCCTTCATTTGAGTATATTCAGATaGCCTGCTTCTGCTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HFQVGAFTLNQQFFSLLHLSIFR*PASAAK Trigger: TTTTGCAGCAGAAGCAGGCCATCTGAATATACTCAA...ATGAAGGAGGGAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR TCA 90 bp | GATAAAACAAGGGAGAAGAGTTTCAGGAATATTAAATACCGAATTAAGTGGAGGATGCATGGAGAGTTTTaGGTATATTCAGATGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DKTREKSFRNIKYRIKWRMHGEF*VYSDGL Trigger: CAGGCCATCTGAATATACTCAAAACTCTCCATGCAT...CCTCCACTTAATTCGGTATTTAATATTCCTGAAACTCTTCTCCCTTGTTTTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR TCA 90 bp | CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATAGGTCTAGGCTTCTTTTaGAGTTCTCTTATATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYLHHLAQEPTYSKCESIGLGFF*SSLISF Trigger: AAAGGATATAAGAGAACTTCAAAAGAAGCCTAGACC...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | AACCTATGCACATTTCCAAGTTGGTGCCTTCACTCTAAATCAACAGTTTTTCTCCCTGCATTTCAGTTATaGTGGGATCATATTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NLCTFPSWCLHSKSTVFLPAFQL*WDHISC Trigger: ACATGAAATATGATCCCAGCATAACTGAAATGCAGG...GAGAAAAACTGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGTGCATAGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | CTTTATCTTCATCACCTAGCCCAGGAGCCAACTTACTCAAAATGTGAATCAATAGGTGAGTATGTGACTTaGTTAAAGGTACTTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYLHHLAQEPTYSKCESIGEYVT*LKVLGK Trigger: TTTTCCAAGTACCTTTAAGCAAGTCACATACTCACC...TATTGATTCACATTTTGAGTAAGTTGGCTCCTGGGCTAGGTGATGAAGATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CCA 90 bp | TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCGAAAATGATCACATATaGTCTAGGCTTCTTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YTNKLLMHLFQLVTPLMSENDHI*SRLLLK Trigger: CTTCAAAAGAAGCCTAGACCATATGTGATCATTTTC...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR GCA 90 bp | GACCCTAAGGAATGTCAGCATTTAAAAGGCACGCAAGAACATATCATAAGATTTACATTTCCAAGTTGGTaGCTTCACTCTAAATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: DPKECQHLKGTQEHIIRFTFPSW*LHSKST Trigger: TGTTGATTTAGAGTGAAGGCACCAACTTGGAAATGT...AAATCTTATGATATGTTCTTGCGTGCCTTTTAAATGCTGACATTCCTTAGGGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS CCA 90 bp | GCATCCCAGTCTTCATCACGCTCATCCAGAGGCAGCCCCTTCTGCTaGGCAGCGCAACGGTGGTCCTGGCACTCGGGCTCTGCCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASQSSSRSSRGSPFC*AAQRWSWHSGSAFS Trigger: GGAAAAGGCAGAGCCCGAGTGCCAGGACCACCGTTGCGCTGCCCAGCAGAAGGGGCTGCCTCTGGATGAGCGTGATGAAGACTGGGATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS GCA 90 bp | TTGGCATCCCAGTCTTCATCACGCTCATCCAGAGGCAGCCCCTTCTaGTGGGCAGCGCAACGGTGGTCCTGGCACTCGGGCTCTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LASQSSSRSSRGSPF*WAAQRWSWHSGSAF Trigger: AAAGGCAGAGCCCGAGTGCCAGGACCACCGTTGCGCTGCCCAGCAGAAGGGGCTGCCTCTGGATGAGCGTGATGAAGACTGGGATGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS CCA 90 bp | TCACGCTCATCCAGAGGCAGCCCCTTCTGCTGGGCAGCGCAACGGTaGTCCTGGCACTCGGGCTCTGCCTTTTCCAGAAATGCCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSRGSPFCWAAQR*SWHSGSAFSRNATQ Trigger: CTGTGTGGCATTTCTGGAAAAGGCAGAGCCCGAGTGCCAGGACCACCGTTGCGCTGCCCAGCAGAAGGGGCTGCCTCTGGATGAGCGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS GCA 90 bp | CGGTGTGTCTCCAAAGAAGTCAGGGGCGTCGATGGCAGCGTGCAATaGATGGAGAGTTTTGAGTATATTCAGATGGCCTGCTTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RCVSKEVRGVDGSVQ*MESFEYIQMACFCC Trigger: GCAGCAGAAGCAGGCCATCTGAATATACTCAAAACTCTCCATGCATTGCACGCTGCCATCGACGCCCCTGACTTCTTTGGAGACACACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000445060.1 ENST00000565422.3 |
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| CDS CCA 90 bp | AGTTTTGAGTATATTCAGATGGCCTGCTTCTGCTGCAAAATGAGCTaGGGTCCAGCCCACACTAGTAACCAGGCAGGGCCTGGCTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: SFEYIQMACFCCKMS*GPAHTSNQAGPGSI Trigger: TATGGAGCCAGGCCCTGCCTGGTTACTAGTGTGGGCTGGACCCCAGCTCATTTTGCAGCAGAAGCAGGCCATCTGAATATACTCAAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000445060.1 ENST00000565422.3 |
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| CDS GCA 90 bp | CTCTTCGGTGTGTCTCCAAAGAAGTCAGGGGCGTCGATGGCAGCGTaGAATGCATGGAGAGTTTTGAGTATATTCAGATGGCCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFGVSPKKSGASMAA*NAWRVLSIFRWPAS Trigger: AGAAGCAGGCCATCTGAATATACTCAAAACTCTCCATGCATTGCACGCTGCCATCGACGCCCCTGACTTCTTTGGAGACACACCGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000445060.1 ENST00000565422.3 |
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| CDS CCA 90 bp | GTGTCTCCAAAGAAGTCAGGGGCGTCGATGGCAGCGTGCAATGCATaGAGAGTTTTGAGTATATTCAGATGGCCTGCTTCTGCTGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSPKKSGASMAACNA*RVLSIFRWPASAAK Trigger: TTTTGCAGCAGAAGCAGGCCATCTGAATATACTCAAAACTCTCCATGCATTGCACGCTGCCATCGACGCCCCTGACTTCTTTGGAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000445060.1 ENST00000565422.3 |
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| CDS-3UTR CAA 90 bp | GCTTGCCTAGTTCACTGTGGTCACCCACCCCGTCACCTGACCTTATGCTCCATTCACACATATACAGTTTaGTATGAGGCCAATGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ACLVHCGHPPRHLTLCSIHTYTV*YEANGE Trigger: CTCACCATTGGCCTCATACAAAACTGTATATGTGTG...AATGGAGCATAAGGTCAGGTGACGGGGTGGGTGACCACAGTGAACTAGGCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CAA 90 bp | TACACAAATAAATTGCTAATGCATCTGTTTCAGCTTGTGACTCCCCTGATGAGCAGCACTCCCCACTATTaGGAGGCAAGCACCCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YTNKLLMHLFQLVTPLMSSTPHY*EASTPP Trigger: AGGAGGGGTGCTTGCCTCCAAATAGTGGGGAGTGCT...GCTCATCAGGGGAGTCACAAGCTGAAACAGATGCATTAGCAATTTATTTGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CAA 90 bp | TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATGTCTGCCTACTTTTCTaGGTAATAGCACTCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLAQHCLPTFLGNSTPHYVCLLF*VIALPT Trigger: AGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGAC...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CAA 90 bp | TTGCTGGCTCAACACTGTCTGCCTACTTTTCTTGGTAATAGCACTCCCCACTATAATGCATGGAGAGTTTaGAGTATATTCAGATGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLAQHCLPTFLGNSTPHYNAWRV*SIFRWP Trigger: AGGCCATCTGAATATACTCAAAACTCTCCATGCATT...ATAGTGGGGAGTGCTATTACCAAGAAAAGTAGGCAGACAGTGTTGAGCCAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CAA 90 bp | GATAAAACAAGGGAGAAGAGTTTCAGGAATATTAAATACCGAATTAAGTGGAGGCAGAGGAAGGACATGTaGTCCTTCCCCAAGATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: DKTREKSFRNIKYRIKWRQRKDM*SFPKIL Trigger: TAAAATCTTGGGGAAGGACAACATGTCCTTCCTCTG...CCTCCACTTAATTCGGTATTTAATATTCCTGAAACTCTTCTCCCTTGTTTTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS-3UTR CAA 90 bp | TATTTATGTAAACAAGTTATTTCGTCTCCCACACAGTTAACCTTCTTGATGTCCTGGTCTAGGCTTCTTTaGAAGTTCTCTTATATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YLCKQVISSPTQLTFLMSWSRLL*KFSYIL Trigger: AAGGATATAAGAGAACTTCAAAAGAAGCCTAGACCA...GGACATCAAGAAGGTTAACTGTGTGGGAGACGAAATAACTTGTTTACATAAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445060.1 |
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| CDS CCA 72 bp | GGCAGCCCCTTCTGCTGGGCAGCGCAACGGTGGTCCTaGCACTCGGGCTCTGCCTTTTCCAGAAATGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GSPFCWAAQRWS*HSGSAFSRNAT Trigger: TGTGGCATTTCTGGAAAAGGCAGAGCCCGAGTGCCAGGACCACCGTTGCGCTGCCCAGCAGAAGGGGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS CCA 72 bp | TCCAGAGGCAGCCCCTTCTGCTGGGCAGCGCAACGGTaGTCCTGGCACTCGGGCTCTGCCTTTTCCAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SRGSPFCWAAQR*SWHSGSAFSRN Trigger: ATTTCTGGAAAAGGCAGAGCCCGAGTGCCAGGACCACCGTTGCGCTGCCCAGCAGAAGGGGCTGCCTCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS CCA 72 bp | TATATTCAGATGGCCTGCTTCTGCTGCAAAATGAGCTaGGGTCCAGCCCACACTAGTAACCAGGCAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: YIQMACFCCKMS*GPAHTSNQAGP Trigger: AGGCCCTGCCTGGTTACTAGTGTGGGCTGGACCCCAGCTCATTTTGCAGCAGAAGCAGGCCATCTGAATATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000445060.1 ENST00000565422.3 |
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| CDS TCA 72 bp | TTGAGTATATTCAGATGGCCTGCTTCTGCTGCAAAATaGGCTGGGGTCCAGCCCACACTAGTAACCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSIFRWPASAAK*AGVQPTLVTRQ Trigger: CTGCCTGGTTACTAGTGTGGGCTGGACCCCAGCTCATTTTGCAGCAGAAGCAGGCCATCTGAATATACTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000445060.1 ENST00000565422.3 |
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| CDS GCA 72 bp | TCCAAAGAAGTCAGGGGCGTCGATGGCAGCGTGCAATaGATGGAGAGTTTTGAGTATATTCAGATGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SKEVRGVDGSVQ*MESFEYIQMAC Trigger: GCAGGCCATCTGAATATACTCAAAACTCTCCATGCATTGCACGCTGCCATCGACGCCCCTGACTTCTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000445060.1 ENST00000565422.3 |
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| CDS CAA 90 bp | CTCATTTCTGGCACCAGGGAAAGTTCCTTGCCAGAAAACATAAGGTaGAGTTCTCATACTCTCCTCCCCTTGGTATTGCTGGGCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LISGTRESSLPENIR*SSHTLLPLVLLGLV Trigger: CACCAGGCCCAGCAATACCAAGGGGAGGAGAGTATGAGAACTCAACCTTATGTTTTCTGGCAAGGAACTTTCCCTGGTGCCAGAAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS CAA 90 bp | GCCACCATGCCTAACAGCCTCATTTCTGGCACCAGGGAAAGTTCCTaGCCAGAAAACATAAGGTTGAGTTCTCATACTCTCCTCCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ATMPNSLISGTRESS*PENIRLSSHTLLPL Trigger: CAAGGGGAGGAGAGTATGAGAACTCAACCTTATGTTTTCTGGCAAGGAACTTTCCCTGGTGCCAGAAATGAGGCTGTTAGGCATGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS GCA 72 bp | GTGTCTCCAAAGAAGTCAGGGGCGTCGATGGCAGCGTaGAATGCATGGAGAGTTTTGAGTATATTCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: VSPKKSGASMAA*NAWRVLSIFRW Trigger: CCATCTGAATATACTCAAAACTCTCCATGCATTGCACGCTGCCATCGACGCCCCTGACTTCTTTGGAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000445060.1 ENST00000565422.3 |
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| CDS CCA 72 bp | CACCTCCATTTGCCCTTTGATTGCAGCCCAGTGAAGTaGGGTCCGGTCATTCCAGTCTACATCTTTGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: HLHLPFDCSPVK*GPVIPVYIFVV Trigger: AACTACAAAGATGTAGACTGGAATGACCGGACCCCACTTCACTGGGCTGCAATCAAAGGGCAAATGGAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS CAA 72 bp | AGCTGTAGTCTCCTGCAGCCACAGCTTGGTGAAGCTTaGTCATGTCTGACATTTTGGCCAATTCCATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SCSLLQPQLGEA*SCLTFWPIPWQ Trigger: CTGCCATGGAATTGGCCAAAATGTCAGACATGACAAAGCTTCACCAAGCTGTGGCTGCAGGAGACTACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS CAA 72 bp | GGCACCAGGGAAAGTTCCTTGCCAGAAAACATAAGGTaGAGTTCTCATACTCTCCTCCCCTTGGTATTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GTRESSLPENIR*SSHTLLPLVLL Trigger: CAGCAATACCAAGGGGAGGAGAGTATGAGAACTCAACCTTATGTTTTCTGGCAAGGAACTTTCCCTGGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS CAA 90 bp | TCTTCACTAAGCTGTAGTCTCCTGCAGCCACAGCTTGGTGAAGCTTaGTCATGTCTGACATTTTGGCCAATTCCATGGCAGAAAACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSLSCSLLQPQLGEA*SCLTFWPIPWQKTK Trigger: CTTTGTTTTCTGCCATGGAATTGGCCAAAATGTCAGACATGACAAAGCTTCACCAAGCTGTGGCTGCAGGAGACTACAGCTTAGTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS CAA 90 bp | CCCAGTGAAGTGGGGTCCGGTCATTCCAGTCTACATCTTTGTAGTTaGGGTCACAGAGACCTTTCTTCAAAATCTTCTTCACTAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSEVGSGHSSLHLCS*GHRDLSSKSSSLSC Trigger: ACAGCTTAGTGAAGAAGATTTTGAAGAAAGGTCTCTGTGACCCAAACTACAAAGATGTAGACTGGAATGACCGGACCCCACTTCACTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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| CDS CCA 72 bp | GAAGCTTTGTCATGTCTGACATTTTGGCCAATTCCATaGCAGAAAACAAAGAATCTGAAACTCTGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EALSCLTFWPIP*QKTKNLKLWAG Trigger: CCCTGCCCAGAGTTTCAGATTCTTTGTTTTCTGCCATGGAATTGGCCAAAATGTCAGACATGACAAAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
||
| CDS CCA 72 bp | TGGGGTCCGGTCATTCCAGTCTACATCTTTGTAGTTTaGGTCACAGAGACCTTTCTTCAAAATCTTCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: WGPVIPVYIFVV*VTETFLQNLLH Trigger: GTGAAGAAGATTTTGAAGAAAGGTCTCTGTGACCCAAACTACAAAGATGTAGACTGGAATGACCGGACCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
||
| CDS CAA 72 bp | GTGGGGTCCGGTCATTCCAGTCTACATCTTTGTAGTTaGGGTCACAGAGACCTTTCTTCAAAATCTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VGSGHSSLHLCS*GHRDLSSKSSS Trigger: TGAAGAAGATTTTGAAGAAAGGTCTCTGTGACCCAAACTACAAAGATGTAGACTGGAATGACCGGACCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
||
| CDS CCA 72 bp | CCACAGCTTGGTGAAGCTTTGTCATGTCTGACATTTTaGCCAATTCCATGGCAGAAAACAAAGAATCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PQLGEALSCLTF*PIPWQKTKNLK Trigger: TTTCAGATTCTTTGTTTTCTGCCATGGAATTGGCCAAAATGTCAGACATGACAAAGCTTCACCAAGCTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565422.3 |
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