RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000135299

Ensembl transcript IDs: ENST00000339746.9, ENST00000369408.9, ENST00000415924.6, ENST00000447838.6, ENST00000465722.6, ENST00000479572.1, ENST00000483473.1, ENST00000485637.5, ENST00000492158.5, ENST00000518150.5, ENST00000518253.5, ENST00000520458.5, ENST00000520793.5, ENST00000520839.1, ENST00000520886.6, ENST00000521004.1, ENST00000521240.1, ENST00000522441.5, ENST00000522705.5, ENST00000522779.5, ENST00000523798.5, ENST00000524056.5

Found 797 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGACTGGTGGCACACGCCTGTAGTCCCAAGCTACTTGCGAGGTTaGGGCAGGAGGATCACGAGCCTGAGAGGCCAAGGCTGCAGTGAG +
Preference number: 1 (lower is better)
Translates to: QDWWHTPVVPSYLRG*GRRITSLRGQGCSE
Trigger: CTCACTGCAGCCTTGGCCTCTCAGGCTCGTGATCCTCCTGCCTCAACCTCGCAAGTAGCTTGGGACTACAGGCGTGTGCCACCAGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
3UTR TCA 90 bp GTGACAAAGATCCAGCCACAGGGAGAAGATGAGGCGGCCCAGGCATaGACACGAAGAGCTGGACTTGATGCCTTTGACTCCCGTCATCCT +
Preference number: 1 (lower is better)
Translates to: VTKIQPQGEDEAAQA*TRRAGLDAFDSRHP
Trigger: AGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCGTGTTCATGCCTGGGCCGCCTCATCTTCTCCCTGTGGCTGGATCTTTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
3UTR GCA 90 bp AGTCCCTGTCCCACTTCTTCAGGGATGGGCATTTGGCCTAAACTCTaGAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTT +
Preference number: 1 (lower is better)
Translates to: SPCPTSSGMGIWPKL*NHGPVLRCLKLELL
Trigger: AAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTGAAGAAGTGGGACAGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
3UTR TCA 90 bp TGTTTATATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATaGAGTTGGGGAACAGTGGGGCCTAAGTTGAGTTATCGAATATTT +
Preference number: 1 (lower is better)
Translates to: CLYFIMEQSKVFWPP*SWGTVGPKLSYRIF
Trigger: AAATATTCGATAACTCAACTTAGGCCCCACTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAATATAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
3UTR CCA 90 bp GGTTCCTGTGTCTATAGAAATAGAACTGAAGTTTCTGTGCATACATaGGATATTGAGGAGATGAATATAAATCCCATATTCCAAAGGACA +
Preference number: 1 (lower is better)
Translates to: GSCVYRNRTEVSVHT*DIEEMNINPIFQRT
Trigger: TGTCCTTTGGAATATGGGATTTATATTCATCTCCTCAATATCCCATGTATGCACAGAAACTTCAGTTCTATTTCTATAGACACAGGAACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
3UTR-3UTR TCA 90 bp CATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTGGCTGAGTAGCGCCACAGGGAGAAGATaGGGCGGCCCAGGCATGAAC +
Preference number: 2 (lower is better)
Translates to: HGPVLRCLKLELLPWLSSATGRR*GGPGMN
Trigger: GTTCATGCCTGGGCCGCCTCATCTTCTCCCTGTGGC...GCTACTCAGCCAAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
3UTR-3UTR CCA 90 bp TGTCTCCTGCTGAGACACTGCCCTTGCTTTGGGCCACCTCATCTCTTGGCACAGGTCTCCAGCGGAGTCTaGCCTGCTTTGGGTAACATC +
Preference number: 2 (lower is better)
Translates to: CLLLRHCPCFGPPHLLAQVSSGV*PALGNI
Trigger: GATGTTACCCAAAGCAGGCCAGACTCCGCTGGAGAC...CTGTGCCAAGAGATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524056.5
3UTR-3UTR CCA 90 bp CTCTCTCTCTTTTTCCTCAGGCTTCGCCCACGACTGAAGCGCAAGACCTGGGGAGAGTCTGGCCTGCTTTaGGTAACATCCACTCGTCAG +
Preference number: 2 (lower is better)
Translates to: LSLFFLRLRPRLKRKTWGESGLL*VTSTRQ
Trigger: CTGACGAGTGGATGTTACCCAAAGCAGGCCAGACTC...TCCCCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCCTGAGGAAAAAGAGAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524056.5
3UTR-3UTR TCA 90 bp GGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCGAGGCGGCCCAGGCATaGACACGAAGAGCTGGACTT +
Preference number: 2 (lower is better)
Translates to: GLNSAIMALSCDVLNWNFEAAQA*TRRAGL
Trigger: AAGTCCAGCTCTTCGTGTTCATGCCTGGGCCGCCTC...GAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
3UTR-3UTR TCA 90 bp TGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACCTAGGCAGCTGGCCGTaGCAAAGATCCAGCCACAGG +
Preference number: 2 (lower is better)
Translates to: WAFGLNSAIMALSCDVLNLGSWP*QRSSHR
Trigger: CCTGTGGCTGGATCTTTGTCACGGCCAGCTGCCTAG...GTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
3UTR-3UTR TCA 90 bp TGTCCCACTTCTTCAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTAGCTGGGAAACTATaGCCTAGGCAGCTGGCCGTG +
Preference number: 2 (lower is better)
Translates to: CPTSSGMGIWPKLCNHGPVAGKL*PRQLAV
Trigger: CACGGCCAGCTGCCTAGGTCATAGTTTCCCAGCTAC...AGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTGAAGAAGTGGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
3UTR-3UTR CCA 90 bp AAGAGCAACTTCCGGGTTATTGTGGTAGCGGGCAGTCTCCAGCGGAGTCTGGCCACTCGTCAGTTTAACTaGACATCCCTGAGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: KSNFRVIVVAGSLQRSLATRQFN*TSLSSF
Trigger: AAAAGAACTCAGGGATGTCCAGTTAAACTGACGAGT...GGCCAGACTCCGCTGGAGACTGCCCGCTACCACAATAACCCGGAAGTTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524056.5
3UTR-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCATCGTCCAGTTTCTTaGCATGGCTTGCTTAATCTG +
Preference number: 2 (lower is better)
Translates to: RVYLAHLRVTALTERHLSHRPVS*HGLLNL
Trigger: CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
3UTR-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAATGCAGTTGCAAAACTaGAAATCTTCAAGAATCCTT +
Preference number: 2 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQMQLQN*KSSRIL
Trigger: AAGGATTCTTGAAGATTTCCAGTTTTGCAACTGCAT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
3UTR-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATAACTTCAGATTAACCTaGACTGAGGCTAAGAGTTTA +
Preference number: 2 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNNFRLT*TEAKSL
Trigger: TAAACTCTTAGCCTCAGTCCAGGTTAATCTGAAGTT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
3UTR-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGATGCAGTTGCAAAACTaGAAATCTTCAAGAATCCTT +
Preference number: 2 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQMQLQN*KSSRIL
Trigger: AAGGATTCTTGAAGATTTCCAGTTTTGCAACTGCAT...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
3UTR-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTAACTTCAGATTAACCTaGACTGAGGCTAAGAGTTTA +
Preference number: 2 (lower is better)
Translates to: RVYLAHLRVTALTERHLSNFRLT*TEAKSL
Trigger: TAAACTCTTAGCCTCAGTCCAGGTTAATCTGAAGTT...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
3UTR-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTATGCAGTTGCAAAACTaGAAATCTTCAAGAATCCTT +
Preference number: 2 (lower is better)
Translates to: RVYLAHLRVTALTERHLSMQLQN*KSSRIL
Trigger: AAGGATTCTTGAAGATTTCCAGTTTTGCAACTGCAT...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
3UTR TCA 72 bp TGGCACACGCCTGTAGTCCCAAGCTACTTGCGAGGTTaGGGCAGGAGGATCACGAGCCTGAGAGGCCAAGGC +
Preference number: 3 (lower is better)
Translates to: WHTPVVPSYLRG*GRRITSLRGQG
Trigger: GCCTTGGCCTCTCAGGCTCGTGATCCTCCTGCCTCAACCTCGCAAGTAGCTTGGGACTACAGGCGTGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
3UTR TCA 72 bp GCTGGCCGTGACAAAGATCCAGCCACAGGGAGAAGATaGGGCGGCCCAGGCATGAACACGAAGAGCTGGACT +
Preference number: 3 (lower is better)
Translates to: AGRDKDPATGRR*GGPGMNTKSWT
Trigger: AGTCCAGCTCTTCGTGTTCATGCCTGGGCCGCCTCATCTTCTCCCTGTGGCTGGATCTTTGTCACGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
3UTR-3UTR CAA 90 bp TGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACCTGGACTTGATGCCTTaGACTCCCGTCATCCTGGGC +
Preference number: 3 (lower is better)
Translates to: WAFGLNSAIMALSCDVLNLDLMP*TPVILG
Trigger: GCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAG...GTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
3UTR-3UTR CAA 90 bp TGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACCACGAAGAGCTGGACTaGATGCCTTTGACTCCCGTC +
Preference number: 3 (lower is better)
Translates to: WAFGLNSAIMALSCDVLNHEELD*MPLTPV
Trigger: GACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCGTG...GTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
3UTR GCA 72 bp CCCACTTCTTCAGGGATGGGCATTTGGCCTAAACTCTaGAATCATGGCCCTGTCCTGCGATGTCTTAAACTG +
Preference number: 3 (lower is better)
Translates to: PTSSGMGIWPKL*NHGPVLRCLKL
Trigger: CAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTGAAGAAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
3UTR-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGACAATAGTTGACTCCTaGGGCATAGCTATTATGCAG +
Preference number: 3 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLTIVDS*GIAIMQ
Trigger: CTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
3UTR-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAACAATAGTTGACTCCTaGGGCATAGCTATTATGCAG +
Preference number: 3 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQTIVDS*GIAIMQ
Trigger: CTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
3UTR TCA 72 bp TTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATaGAGTTGGGGAACAGTGGGGCCTAAGTTGAGTTAT +
Preference number: 3 (lower is better)
Translates to: FIMEQSKVFWPP*SWGTVGPKLSY
Trigger: ATAACTCAACTTAGGCCCCACTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
3UTR-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATACAATAGTTGACTCCTaGGGCATAGCTATTATGCAG +
Preference number: 3 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNTIVDS*GIAIMQ
Trigger: CTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
3UTR CCA 72 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTaGCATGGCTTGCTTAATCTGAGCTTTCAAACTTCA +
Preference number: 3 (lower is better)
Translates to: ILESRLTHRPVS*HGLLNLSFQTS
Trigger: TGAAGTTTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp CAACTTCCGGGTTATTGTGGTAGCGGGCAGTCTCCAGCGGAGTCTGGCCTGCTTGGCTTCGCCCACGACTaGAGCGCAAGACCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QLPGYCGSGQSPAESGLLGFAHD*SARPGE
Trigger: CTCCCCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCC...AAGCAGGCCAGACTCCGCTGGAGACTGCCCGCTACCACAATAACCCGGAAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR GCA 90 bp GCCACAGCCTGTTCACTGCTGGGGGTGTCTCCTGCTGAGACACTGCCCTTGCTTCTCCTGCTGAGACACTaGCCTTGCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: ATACSLLGVSPAETLPLLLLLRH*PCFGPP
Trigger: AGGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAG...AAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCCAGCAGTGAACAGGCTGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR GCA 90 bp CACGAAGAGCTGGACTTGATGCCTTTGACTCCCGTCATCCTGGGCCCCCATGCACTGGGCCCCCATGCATaGCTATACCTCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: HEELDLMPLTPVILGPHALGPHA*LYLHCL
Trigger: CAGGCAGTGGAGGTATAGGCATGCATGGGGGCCCAG...TGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp AGCAACTTCCGGGTTATTGTGGTAGCGGGCAGTCTCCAGCGGAGTCTGGCCTGCCAGCCTGTTCACTGCTaGGGGTGTCTCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SNFRVIVVAGSLQRSLACQPVHC*GCLLLR
Trigger: TCTCAGCAGGAGACACCCCCAGCAGTGAACAGGCTG...GCAGGCCAGACTCCGCTGGAGACTGCCCGCTACCACAATAACCCGGAAGTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR TCA 90 bp CTCTCTCTCTTTTTCCTCAGGCTTCGCCCACGACTGAAGCGCAAGACCTGGGGAAGGGCAGCAGCAACGTaGAGTGCTGTGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LSLFFLRLRPRLKRKTWGRAAAT*SAVSPA
Trigger: GGCTGGAGACACAGCACTTCACGTTGCTGCTGCCCT...TCCCCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCCTGAGGAAAAAGAGAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR TCA 90 bp CTCTCTCTCTTTTTCCTCAGGCTTCGCCCACGACTGAAGCGCAAGACCTGGGGAGGGGGTGTCTCCTGCTaGGACACTGCCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LSLFFLRLRPRLKRKTWGGGVSC*DTALAL
Trigger: CAAAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCC...TCCCCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCCTGAGGAAAAAGAGAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR GCA 90 bp TGTTCACTGCTGGGGGTGTCTCCTGCTGAGACACTGCCCTTGCTTTGGGCCACCCTGAGACACTGCCCTTaGTTTGGGCCACCTCATCTC +
Preference number: 4 (lower is better)
Translates to: CSLLGVSPAETLPLLWATLRHCP*FGPPHL
Trigger: GAGATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAG...GGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCCAGCAGTGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCAGGCCGGCGACACGGTaGGGGGCGAGGGGCGAAGAC +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSRPATR*GARGED
Trigger: GTCTTCGCCCCTCGCCCCCCACCGTGTCGCCGGCCT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
CDS-3UTR CCA 90 bp GGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTGGCTGAGTAGCTGGCGCGTGCTCTGGGAGTaGCTGTTCTGGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPVLRCLKLELLPWLSSWRVLWE*LFWQAR
Trigger: CCTGGCCTGCCAGAACAGCCACTCCCAGAGCACGCG...CCAGCTACTCAGCCAAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp TGTTCACTGCTGGGGGTGTCTCCTGCTGAGACACTGCCCTTGCTTTGGGCCACCGTCTCCAGCGGAGTCTaGCCTGCTTTGGGTAACATC +
Preference number: 4 (lower is better)
Translates to: CSLLGVSPAETLPLLWATVSSGV*PALGNI
Trigger: GATGTTACCCAAAGCAGGCCAGACTCCGCTGGAGAC...GGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCCAGCAGTGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR TCA 90 bp TCACTGCTGGGGGTGTCTCCTGCTGAGACACTGCCCTTGCTTTGGGCCACCTCATTGGCCACCTTCTTGTaGTTTAGGGCAGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: SLLGVSPAETLPLLWATSLATFL*FRAAAT
Trigger: CGTTGCTGCTGCCCTAAATCACAAGAAGGTGGCCAA...TGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCCAGCAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR GCA 90 bp GTTCACTGCTGGGGGTGTCTCCTGCTGAGACACTGCCCTTGCTTTGGGCCACCTAGCAGCAACGTGAAGTaGTGTGTCTCCAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: VHCWGCLLLRHCPCFGPPSSNVK*CVSSLV
Trigger: AACCAGGCTGGAGACACAGCACTTCACGTTGCTGCT...AGGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCCAGCAGTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR TCA 90 bp CAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCCTCCTGCATTATTTTTaGGGTCAGCGCGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: QGWAFGLNSAIMALSCDVLLHYF*GQRGTR
Trigger: CCGGGTCCCGCGCTGACCTCAAAAATAATGCAGGAG...GACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGGCGAAGACGGGGACTaGCTCCCGCTGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQGEDGD*LPLAPA
Trigger: CGCCGGAGCCAGCGGGAGCCAGTCCCCGTCTTCGCC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
CDS-3UTR CCA 90 bp CACGAAGAGCTGGACTTGATGCCTTTGACTCCCGTCATCCTGGGCCCCCATGCAGAAGATGGCCCTTATTaGCAGCAAGATGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: HEELDLMPLTPVILGPHAEDGPY*QQDAGE
Trigger: CTCCCCTGCATCTTGCTGCCAATAAGGGCCATCTTC...TGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp CTTCAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATAGGGCACACCCTTCGTaGATGAGCGCCGCGATGATC +
Preference number: 4 (lower is better)
Translates to: LQGWAFGLNSAIMALSCDRAHPS*MSAAMI
Trigger: GATCATCGCGGCGCTCATCCACGAAGGGTGTGCCCT...ATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp CAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTCCCCGCCTTGTTCTTaGCAAGCACGTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QGWAFGLNSAIMALSCDVSPPCS*QARWLL
Trigger: CAGGAGCCAACGTGCTTGCCAAGAACAAGGCGGGGA...GACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp AAGAGCAACTTCCGGGTTATTGTGGTAGCGGGCAGTCTCCAGCGGAGTCTGGCCGAGTCTGGCCTGCTTTaGGTAACATCCACTCGTCAG +
Preference number: 4 (lower is better)
Translates to: KSNFRVIVVAGSLQRSLAESGLL*VTSTRQ
Trigger: CTGACGAGTGGATGTTACCCAAAGCAGGCCAGACTC...GGCCAGACTCCGCTGGAGACTGCCCGCTACCACAATAACCCGGAAGTTGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR TCA 90 bp GGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCGCCACAGGGAGAAGATaGGGCGGCCCAGGCATGAAC +
Preference number: 4 (lower is better)
Translates to: GLNSAIMALSCDVLNWNFATGRR*GGPGMN
Trigger: GTTCATGCCTGGGCCGCCTCATCTTCTCCCTGTGGC...GAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR TCA 90 bp CATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTGGCTGAGTAGCCTAGGCAGCTGGCCGTaGCAAAGATCCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: HGPVLRCLKLELLPWLSSLGSWP*QRSSHR
Trigger: CCTGTGGCTGGATCTTTGTCACGGCCAGCTGCCTAG...GCTACTCAGCCAAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp ATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAAACCACTGTGGCCCGGTaGAAGGCGGTCTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: MGIWPKLCNHGPVLRCLKTTVAR*KAVWSP
Trigger: TGGGGACCAGACCGCCTTGCACCGGGCCACAGTGGT...TTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp GCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGTTCTGGCAGGCCAGGTaGAGAGCTGTGTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: AFGLNSAIMALSCDVLNWFWQAR*RAVFPA
Trigger: GGCGGGGAACACAGCTCTGCACCTGGCCTGCCAGAA...CCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp TGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACGCAGGAGGACGCGCGTaGTCTGGGAGTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: WAFGLNSAIMALSCDVLNAGGRA*SGSGCS
Trigger: AGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGC...GTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp CTGAAGCGCAAGACCTGGGGAGCTTTAGTAAGGAGAAGAGCAACTTCCGGGTTACCACAGCCTGTTCACTaGTGGGGGTGTCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LKRKTWGALVRRRATSGLPQPVH*WGCLLL
Trigger: CAGCAGGAGACACCCCCAGCAGTGAACAGGCTGTGG...TAACCCGGAAGTTGCTCTTCTCCTTACTAAAGCTCCCCAGGTCTTGCGCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR CCA 90 bp TGTCCCACTTCTTCAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCACTGGCCCGGCCTaGCACCCAGAGGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: CPTSSGMGIWPKLCNHGPVTGPA*HPEVKM
Trigger: CATCTTTACCTCTGGGTGCCAGGCCGGGCCAGTGAC...AGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTGAAGAAGTGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp TGTCCCACTTCTTCAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTTCAACACGAAGTCACTaGCCCGGCCTGGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: CPTSSGMGIWPKLCNHGPSTRSH*PGLAPR
Trigger: TCTGGGTGCCAGGCCGGGCCAGTGACTTCGTGTTGA...AGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTGAAGAAGTGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp GGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCAGGACGCGCGTGCTCTaGGAGTGGCTGTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLNSAIMALSCDVLNWNFRTRVL*EWLFWQ
Trigger: CTGCCAGAACAGCCACTCCCAGAGCACGCGCGTCCT...GAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp TGTTCACTGCTGGGGGTGTCTCCTGCTGAGACACTGCCCTTGCTTTGGGCCACCGCTGTGTCTCCAGCCTaGTTCTTTTCATGGACAGAA +
Preference number: 4 (lower is better)
Translates to: CSLLGVSPAETLPLLWATAVSPA*FFSWTE
Trigger: TTCTGTCCATGAAAAGAACCAGGCTGGAGACACAGC...GGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCCAGCAGTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR TCA 90 bp GGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTATACGAGAAGGCGCTCTaGAAGTGCAGCGACCGCATC +
Preference number: 4 (lower is better)
Translates to: GWAFGLNSAIMALSCDVLYEKAL*KCSDRI
Trigger: GATGCGGTCGCTGCACTTTCAGAGCGCCTTCTCGTA...TAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR TCA 90 bp TGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACGAGGCGGCCCAGGCATaGACACGAAGAGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: WAFGLNSAIMALSCDVLNEAAQA*TRRAGL
Trigger: AAGTCCAGCTCTTCGTGTTCATGCCTGGGCCGCCTC...GTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR TCA 90 bp AGCAACTTCCGGGTTATTGTGGTAGCGGGCAGTCTCCAGCGGAGTCTGGCCTGCTTAACTGGACATCCCTaGGTTCTTTTTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: SNFRVIVVAGSLQRSLACLTGHP*VLFHAR
Trigger: CCTGGCATGAAAAAGAACTCAGGGATGTCCAGTTAA...GCAGGCCAGACTCCGCTGGAGACTGCCCGCTACCACAATAACCCGGAAGTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTCTGGCAGGCCAGGTaGAGAGCTGTGTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSFWQAR*RAVFPA
Trigger: GGCGGGGAACACAGCTCTGCACCTGGCCTGCCAGAA...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTACATCCTGGGCCCCCATaGATGCCTATACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: GWAFGLNSAIMALSCDVLHPGPP*MPIPPL
Trigger: CAGTGGAGGTATAGGCATGCATGGGGGCCCAGGATG...TAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCCTGCGGGTTACCTGTaGCCGAGCCCGCCGCGTCCG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNPAGYL*PSPPRP
Trigger: CGGACGCGGCGGGCTCGGCCACAGGTAACCCGCAGG...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339746.9
CDS-3UTR CCA 90 bp GGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTGGCTGAGTAGCTGGTGGTCCCCATCATCCTaGACATCAAGGTCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GPVLRCLKLELLPWLSSWWSPSS*TSRSQP
Trigger: TGGCTGCGACCTTGATGTCCAGGATGATGGGGACCA...CCAGCTACTCAGCCAAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp GCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGCGGTGCAAGGCGGTCTaGTCCCCATCATCCTGGACA +
Preference number: 4 (lower is better)
Translates to: AFGLNSAIMALSCDVLNWRCKAV*SPSSWT
Trigger: TGTCCAGGATGATGGGGACCAGACCGCCTTGCACCG...CCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp CTCTCTCTCTTTTTCCTCAGGCTTCGCCCACGACTGAAGCGCAAGACCTGGGGACTGAAGCGCAAGACCTaGGGAGCTTTAGTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLFFLRLRPRLKRKTWGLKRKT*GALVRR
Trigger: TCTCCTTACTAAAGCTCCCCAGGTCTTGCGCTTCAG...TCCCCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCCTGAGGAAAAAGAGAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGCCCACAGGTGCTGCTaGCTGCGGGTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQAHRCC*LRVAGH
Trigger: GTGCCCAGCAACCCGCAGCCAGCAGCACCTGTGGGC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGGCTTCGCCCACGACTaGAGCGCAAGACCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLGFAHD*SARPGE
Trigger: CTCCCCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR TCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGGGTTCTGGGGAGGCTaGCAGGAACTCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSGFWGG*QELFSG
Trigger: GCCAGAGAAGAGTTCCTGTCAGCCTCCCCAGAACCC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCAGAGCTGATACGCCCTaGACTCATGGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSRADTP*THGVGV
Trigger: CACCCCCACCCCATGAGTTCAGGGCGTATCAGCTCT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAACCACTGTGGCCCGGTaGAAGGCGGTCTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQTTVAR*KAVWSP
Trigger: TGGGGACCAGACCGCCTTGCACCGGGCCACAGTGGT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGACCACTGTGGCCCGGTaGAAGGCGGTCTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLTTVAR*KAVWSP
Trigger: TGGGGACCAGACCGCCTTGCACCGGGCCACAGTGGT...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGGAGCTGTCGGAAGCTaGTGCTGGACCTGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSGAVGS*CWTCSH
Trigger: GTGACTGCAGGTCCAGCAGCAGCTTCCGACAGCTCC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGGCGAAGACGGGGACTaGCTCCCGCTGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSGEDGD*LPLAPA
Trigger: CGCCGGAGCCAGCGGGAGCCAGTCCCCGTCTTCGCC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGTCACTGGCCCGGCCTaGCACCCAGAGGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSVTGPA*HPEVKM
Trigger: CATCTTTACCTCTGGGTGCCAGGCCGGGCCAGTGAC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp CAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTGGACCACAGGAAGATaGCCCTTATTGGCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: QGWAFGLNSAIMALSCDVWTTGR*PLLAAR
Trigger: TCTTGCTGCCAATAAGGGCCATCTTCCTGTGGTCCA...GACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp GGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAGCCTTCAGCAAGATCTaGACCACAGGAAGATGGCCC +
Preference number: 4 (lower is better)
Translates to: GWAFGLNSAIMALSCDVLAFSKI*TTGRWP
Trigger: GGGCCATCTTCCTGTGGTCCAGATCTTGCTGAAGGC...TAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp AACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTTGTTCCCCACCACTGTaGCCCGGTGCAAGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: NSAIMALSCDVLNWNFFLCSPPL*PGARRS
Trigger: AGACCGCCTTGCACCGGGCCACAGTGGTGGGGAACA...AAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp CGAAGAGCTGGACTTGATGCCTTTGACTCCCGTCATCCTGGGCCCCCATGCATGTCAGGGATGGGCATTTaGCCTAAACTCTGCAATCAT +
Preference number: 4 (lower is better)
Translates to: RRAGLDAFDSRHPGPPCMSGMGI*PKLCNH
Trigger: ATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTGA...CATGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR TCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCCTCCTGCATTATTTTTaGGGTCAGCGCGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSLLHYF*GQRGTR
Trigger: CCGGGTCCCGCGCTGACCTCAAAAATAATGCAGGAG...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp CCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTAGGGCAGCAGCAACGTaGAGTGCTGTGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PKLCNHGPVLRCLKLELLRAAAT*SAVSPA
Trigger: GGCTGGAGACACAGCACTTCACGTTGCTGCTGCCCT...AAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR TCA 90 bp GGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTATTGGCCACCTTCTTGTaGTTTAGGGCAGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: GWAFGLNSAIMALSCDVLLATFL*FRAAAT
Trigger: CGTTGCTGCTGCCCTAAATCACAAGAAGGTGGCCAA...TAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR TCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGGGTGGGGGTGGGGATaGACACCGATGCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLGWGWG*TPMPVP
Trigger: AGGAACAGGCATCGGTGTTCATCCCCACCCCCACCC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGGAGGATCACGAGCCTaGGAGGCCAAGGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQGGSRA*EAKAAV
Trigger: CACTGCAGCCTTGGCCTCTCAGGCTCGTGATCCTCC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp GGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTGGCTGAGTAGCTGGTGCCAGGATGCTTCATaGAAGGCTGTATTCCCATCC +
Preference number: 4 (lower is better)
Translates to: GPVLRCLKLELLPWLSSWCQDAS*KAVFPS
Trigger: GGATGGGAATACAGCCTTGCATGAAGCATCCTGGCA...CCAGCTACTCAGCCAAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp GGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTGGCTGAGTAGCTGGGACTGGCTGAAACCATaGCAGGATGCTTCATGCAAG +
Preference number: 4 (lower is better)
Translates to: GPVLRCLKLELLPWLSSWDWLKP*QDASCK
Trigger: CTTGCATGAAGCATCCTGGCATGGTTTCAGCCAGTC...CCAGCTACTCAGCCAAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGCAGGAGGACGCGCGTaGTCTGGGAGTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLAGGRA*SGSGCS
Trigger: AGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGTGTCTGAGTGCTGTTaGAGGCGGTTCAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSVSECC*RRFRHS
Trigger: GGAGTGCCTGAACCGCCTGCAACAGCACTCAGACAC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGCTGCCCACAGGTGCTaGTGGCTGCGGGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNAAHRC*WLRVAG
Trigger: CCCAGCAACCCGCAGCCAGCAGCACCTGTGGGCAGC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGGCGAAGACGGGGACTaGCTCCCGCTGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNGEDGD*LPLAPA
Trigger: CGCCGGAGCCAGCGGGAGCCAGTCCCCGTCTTCGCC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCCAGCCTGTTCACTGCTaGGGGTGTCTCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSQPVHC*GCLLLR
Trigger: TCTCAGCAGGAGACACCCCCAGCAGTGAACAGGCTG...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTACGCCCTGAACTCATaGGGTGGGGGTGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSYALNS*GGGGDE
Trigger: TTCATCCCCACCCCCACCCCATGAGTTCAGGGCGTA...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGGCCCACAGGTGCTGCTaGCTGCGGGTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQAHRCC*LRVAGH
Trigger: GTGCCCAGCAACCCGCAGCCAGCAGCACCTGTGGGC...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGGGCAGCAGCAACGTaGAGTGCTGTGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLRAAAT*SAVSPA
Trigger: GGCTGGAGACACAGCACTTCACGTTGCTGCTGCCCT...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGGGTTCTGGGGAGGCTaGCAGGAACTCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQGFWGG*QELFSG
Trigger: GCCAGAGAAGAGTTCCTGTCAGCCTCCCCAGAACCC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGGGTTCTGGGGAGGCTaGCAGGAACTCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLGFWGG*QELFSG
Trigger: GCCAGAGAAGAGTTCCTGTCAGCCTCCCCAGAACCC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp CCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTGTAGCTGGGAAACTATaGCCTAGGCAGCTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PKLCNHGPVLRCLKLELLVAGKL*PRQLAV
Trigger: CACGGCCAGCTGCCTAGGTCATAGTTTCCCAGCTAC...AAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp CAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCGAAACCATGCCAGGATaGTTCATGCAAGGCTGTATT +
Preference number: 4 (lower is better)
Translates to: QGWAFGLNSAIMALSCDVETMPG*FMQGCI
Trigger: AATACAGCCTTGCATGAAGCATCCTGGCATGGTTTC...GACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp GCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAGCAGCAACGTGAAGTaGTGTGTCTCCAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: AFGLNSAIMALSCDVLNWSSNVK*CVSSLV
Trigger: AACCAGGCTGGAGACACAGCACTTCACGTTGCTGCT...CCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCCACAGCCTGTTCACTaGTGGGGGTGTCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLPQPVH*WGCLLL
Trigger: CAGCAGGAGACACCCCCAGCAGTGAACAGGCTGTGG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACCACAGCCTGTTCACTaGTGGGGGTGTCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQPQPVH*WGCLLL
Trigger: CAGCAGGAGACACCCCCAGCAGTGAACAGGCTGTGG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGGAGCTGTCGGAAGCTaGTGCTGGACCTGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQGAVGS*CWTCSH
Trigger: GTGACTGCAGGTCCAGCAGCAGCTTCCGACAGCTCC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGGAGCTGTCGGAAGCTaGTGCTGGACCTGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLGAVGS*CWTCSH
Trigger: GTGACTGCAGGTCCAGCAGCAGCTTCCGACAGCTCC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGCTGCCCACAGGTGCTaGTGGCTGCGGGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSAAHRC*WLRVAG
Trigger: CCCAGCAACCCGCAGCCAGCAGCACCTGTGGGCAGC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGTCACTGGCCCGGCCTaGCACCCAGAGGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQVTGPA*HPEVKM
Trigger: CATCTTTACCTCTGGGTGCCAGGCCGGGCCAGTGAC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGTCACTGGCCCGGCCTaGCACCCAGAGGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLVTGPA*HPEVKM
Trigger: CATCTTTACCTCTGGGTGCCAGGCCGGGCCAGTGAC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATCAACACGAAGTCACTaGCCCGGCCTGGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQSTRSH*PGLAPR
Trigger: TCTGGGTGCCAGGCCGGGCCAGTGACTTCGTGTTGA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGCCTTCAGCAAGATCTaGACCACAGGAAGATGGCCC +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSAFSKI*TTGRWP
Trigger: GGGCCATCTTCCTGTGGTCCAGATCTTGCTGAAGGC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTGGTCCCCATCATCCTaGACATCAAGGTCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSWSPSS*TSRSQP
Trigger: TGGCTGCGACCTTGATGTCCAGGATGATGGGGACCA...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACGGTGCAAGGCGGTCTaGTCCCCATCATCCTGGACA +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQRCKAV*SPSSWT
Trigger: TGTCCAGGATGATGGGGACCAGACCGCCTTGCACCG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAAGGGCACACCCTTCGTaGATGAGCGCCGCGATGATC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQRAHPS*MSAAMI
Trigger: GATCATCGCGGCGCTCATCCACGAAGGGTGTGCCCT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGCGCGTGCTCTGGGAGTaGCTGTTCTGGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQRVLWE*LFWQAR
Trigger: CCTGGCCTGCCAGAACAGCCACTCCCAGAGCACGCG...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTCCTGCTGGAGTCTCTaGGTAGCAGTGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSSCWSL*VAVELR
Trigger: CCTCAACTCCACTGCTACCCAGAGACTCCAGCAGGA...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp CAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCGCAGTAAATCCTACCTaGGGAGCTTTAGTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QGWAFGLNSAIMALSCDVAVNPT*GALVRR
Trigger: TCTCCTTACTAAAGCTCCCCAGGTAGGATTTACTGC...GACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR TCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACTCCTGCATTATTTTTaGGGTCAGCGCGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQLLHYF*GQRGTR
Trigger: CCGGGTCCCGCGCTGACCTCAAAAATAATGCAGGAG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCTCCTGCATTATTTTTaGGGTCAGCGCGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLLLHYF*GQRGTR
Trigger: CCGGGTCCCGCGCTGACCTCAAAAATAATGCAGGAG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGGCTTCGCCCACGACTaGAGCGCAAGACCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSGFAHD*SARPGE
Trigger: CTCCCCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR TCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGGGGTGGGGGTGGGGATaGACACCGATGCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQGWGWG*TPMPVP
Trigger: AGGAACAGGCATCGGTGTTCATCCCCACCCCCACCC...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCATGCTTCTCTGTGTCTaGGTGCTGTTGCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSMLLCV*VLLQAV
Trigger: AACCGCCTGCAACAGCACTCAGACACAGAGAAGCAT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGAGGTGTCCCGAATGTaGGGGCCAGTCTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNEVSRM*GPVCSL
Trigger: CAGCGAGCAGACTGGCCCTCACATTCGGGACACCTC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTCTTGCTGGGCTTTCTaGTTGGCTTGGCTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSSCWAF*LAWLRA
Trigger: AGCACGAAGCCAAGCCAATCAGAAAGCCCAGCAAGA...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTAGCGCTCTCGGCTCCTaGGGGTTACCTGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSSALGS*GLPVAE
Trigger: CTCGGCCACAGGTAACCCGCAGGAGCCGAGAGCGCT...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGGCAGGAGGACGCGCGTaGTCTGGGAGTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQAGGRA*SGSGCS
Trigger: AGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGC...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGCAGGAGGACGCGCGTaGTCTGGGAGTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNAGGRA*SGSGCS
Trigger: AGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACTCCTGCTGAGACACTaGCCTTGCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQLLLRH*PCFGPP
Trigger: AGGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCTCCTGCTGAGACACTaGCCTTGCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLLLLRH*PCFGPP
Trigger: AGGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACCTCCTGTCATCCTTTaGTCTGGGTTCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQPPVIL*SGFWGG
Trigger: GCCTCCCCAGAACCCAGAGCAAAGGATGACAGGAGG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGCACTCCGTCCTCTCTaGAGAAAGTCGCTCAACCAT +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSALRPL*RKSLNH
Trigger: ATGGTTGAGCGACTTTCTGCAGAGAGGACGGAGTGC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGTGTCTGAGTGCTGTTaGAGGCGGTTCAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLVSECC*RRFRHS
Trigger: GGAGTGCCTGAACCGCCTGCAACAGCACTCAGACAC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTCTCTGTGTCTGAGTaGTGTTGCAGGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSFSVSE*CCRRFR
Trigger: CCTGAACCGCCTGCAACAGCACTCAGACACAGAGAA...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCCGTTTCTCCCCCTCATaGTTCTCTGTGTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSRFSPS*FSVSEC
Trigger: GCACTCAGACACAGAGAAGCATGAGGGGGAGAAACG...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGCTGCCCACAGGTGCTaGTGGCTGCGGGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNAAHRC*WLRVAG
Trigger: CCCAGCAACCCGCAGCCAGCAGCACCTGTGGGCAGC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTGTTCCCCACCACTGTaGCCCGGTGCAAGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNCSPPL*PGARRS
Trigger: AGACCGCCTTGCACCGGGCCACAGTGGTGGGGAACA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCGCGTGCTCTGGGAGTaGCTGTTCTGGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSRVLWE*LFWQAR
Trigger: CCTGGCCTGCCAGAACAGCCACTCCCAGAGCACGCG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCGCGTGCTCTGGGAGTaGCTGTTCTGGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSRVLWE*LFWQAR
Trigger: CCTGGCCTGCCAGAACAGCCACTCCCAGAGCACGCG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATAGGACGCGCGTGCTCTaGGAGTGGCTGTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNRTRVL*EWLFWQ
Trigger: CTGCCAGAACAGCCACTCCCAGAGCACGCGCGTCCT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp CACGAAGAGCTGGACTTGATGCCTTTGACTCCCGTCATCCTGGGCCCCCATGCACTTCCAGTAAGATTTTaGCCACCTTCTTGTGATTTA +
Preference number: 4 (lower is better)
Translates to: HEELDLMPLTPVILGPHALPVRF*PPSCDL
Trigger: TAAATCACAAGAAGGTGGCCAAAATCTTACTGGAAG...TGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp TGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACGTCTCCAGCGGAGTCTaGCCTGCATTGTTAACAATG +
Preference number: 4 (lower is better)
Translates to: WAFGLNSAIMALSCDVLNVSSGV*PALLTM
Trigger: CATTGTTAACAATGCAGGCCAGACTCCGCTGGAGAC...GTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACAGCCTGTTCACTGCTaGGGGTGTCTCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQQPVHC*GCLLLR
Trigger: TCTCAGCAGGAGACACCCCCAGCAGTGAACAGGCTG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTGTCATCCTTTGCTCTaGGTTCTGGGGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSCHPLL*VLGRLT
Trigger: TGTCAGCCTCCCCAGAACCCAGAGCAAAGGATGACA...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGGCTGTTGGTCGGCTaGTGGGGTGGGGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLRLLVG*WGGVRK
Trigger: TTTTCTGACCCCACCCCACCAGCCGACCAACAGCCT...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTACGCCCTGAACTCATaGGGTGGGGGTGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLYALNS*GGGGDE
Trigger: TTCATCCCCACCCCCACCCCATGAGTTCAGGGCGTA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTTTGGGCCTAACCACTaGAGGGGAGCTGTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLFGPNH*RGAVGS
Trigger: GCTTCCGACAGCTCCCCTCCAGTGGTTAGGCCCAAA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATTTGGGCCTAACCACTaGAGGGGAGCTGTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQFGPNH*RGAVGS
Trigger: GCTTCCGACAGCTCCCCTCCAGTGGTTAGGCCCAAA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGCCCACAGGTGCTGCTaGCTGCGGGTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWAHRCC*LRVAGH
Trigger: GTGCCCAGCAACCCGCAGCCAGCAGCACCTGTGGGC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGGCTTCGCCCACGACTaGAGCGCAAGACCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWGFAHD*SARPGE
Trigger: CTCCCCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR TCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGAGAGCTGATACGCCCTaGACTCATGGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQRADTP*THGVGV
Trigger: CACCCCCACCCCATGAGTTCAGGGCGTATCAGCTCT...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATAGAGCTGATACGCCCTaGACTCATGGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNRADTP*THGVGV
Trigger: CACCCCCACCCCATGAGTTCAGGGCGTATCAGCTCT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTTTGAGTGCCTCTGTTaGCGCAGGGCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNFECLC*RRAQPA
Trigger: AGCAGGCTGGGCCCTGCGTCAACAGAGGCACTCAAA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCCCAGACTTCTTAGTTTaGGTGCCTCTGTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSPDFLV*VPLLTQ
Trigger: CTGCGTCAACAGAGGCACTCAAACTAAGAAGTCTGG...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGAGGTGTCCCGAATGTaGGGGCCAGTCTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSEVSRM*GPVCSL
Trigger: CAGCGAGCAGACTGGCCCTCACATTCGGGACACCTC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGACCACTGTGGCCCGGTaGAAGGCGGTCTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWTTVAR*KAVWSP
Trigger: TGGGGACCAGACCGCCTTGCACCGGGCCACAGTGGT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTTCTGGCAGGCCAGGTaGAGAGCTGTGTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSFWQAR*RAVFPA
Trigger: GGCGGGGAACACAGCTCTGCACCTGGCCTGCCAGAA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGCAGGAGGACGCGCGTaGTCTGGGAGTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSAGGRA*SGSGCS
Trigger: AGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCTGAGACACTGCCCTTaGTTTGGGCCACCTCATCTC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLLRHCP*FGPPHL
Trigger: GAGATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGCCACAGCCTGTTCACTaGTGGGGGTGTCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQPQPVH*WGCLLL
Trigger: CAGCAGGAGACACCCCCAGCAGTGAACAGGCTGTGG...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCCACAGCCTGTTCACTaGTGGGGGTGTCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNPQPVH*WGCLLL
Trigger: CAGCAGGAGACACCCCCAGCAGTGAACAGGCTGTGG...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGAGTGTGTCTGAGTGCTGTTaGAGGCGGTTCAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: IATEYMVTSKIQSLPLQSVSECC*RRFRHS
Trigger: GGAGTGCCTGAACCGCCTGCAACAGCACTCAGACAC...ACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR GCA 90 bp GCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGAGTGCACGTTTCTCCCCCTCATaGTTCTCTGTGTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: ATEYMVTSKIQSLPLQSARFSPS*FSVSEC
Trigger: GCACTCAGACACAGAGAAGCATGAGGGGGAGAAACG...TGCACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGAAGACGACAGCTCCTaGTGGAGTCTCTGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLEDDSS*WSLWVA
Trigger: TGCTACCCAGAGACTCCAGCAGGAGCTGTCGTCTTC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGCTGCCCACAGGTGCTaGTGGCTGCGGGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYAAHRC*WLRVAG
Trigger: CCCAGCAACCCGCAGCCAGCAGCACCTGTGGGCAGC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp GGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCGAGGCTTCAGTAGATTaGAACCAGGAGTCCCAACAA +
Preference number: 4 (lower is better)
Translates to: GLNSAIMALSCDVLNWNFEASVD*NQESQQ
Trigger: TTGTTGGGACTCCTGGTTGCAATCTACTGAAGCCTC...GAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp TGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACATCATGGCCCTGTCCTaGGATGTCTTAAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: WAFGLNSAIMALSCDVLNIMALS*DVLNWN
Trigger: GTTCCAGTTTAAGACATCGCAGGACAGGGCCATGAT...GTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGCCTTCAGCAAGATCTaGACCACAGGAAGATGGCCC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQAFSKI*TTGRWP
Trigger: GGGCCATCTTCCTGTGGTCCAGATCTTGCTGAAGGC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTGGTCCCCATCATCCTaGACATCAAGGTCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLWSPSS*TSRSQP
Trigger: TGGCTGCGACCTTGATGTCCAGGATGATGGGGACCA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCGGTGCAAGGCGGTCTaGTCCCCATCATCCTGGACA +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNRCKAV*SPSSWT
Trigger: TGTCCAGGATGATGGGGACCAGACCGCCTTGCACCG...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTGTTCCCCACCACTGTaGCCCGGTGCAAGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSCSPPL*PGARRS
Trigger: AGACCGCCTTGCACCGGGCCACAGTGGTGGGGAACA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTTGTTCCCCACCACTGTaGCCCGGTGCAAGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSCSPPL*PGARRS
Trigger: AGACCGCCTTGCACCGGGCCACAGTGGTGGGGAACA...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGAGGGCACACCCTTCGTaGATGAGCGCCGCGATGATC +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQRAHPS*MSAAMI
Trigger: GATCATCGCGGCGCTCATCCACGAAGGGTGTGCCCT...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCGCGTGCTCTGGGAGTaGCTGTTCTGGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWRVLWE*LFWQAR
Trigger: CCTGGCCTGCCAGAACAGCCACTCCCAGAGCACGCG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTAGGACGCGCGTGCTCTaGGAGTGGCTGTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSRTRVL*EWLFWQ
Trigger: CTGCCAGAACAGCCACTCCCAGAGCACGCGCGTCCT...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGTCTCCAGCGGAGTCTaGCCTGCATTGTTAACAATG +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSVSSGV*PALLTM
Trigger: CATTGTTAACAATGCAGGCCAGACTCCGCTGGAGAC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATCCTGCTGGAGTCTCTaGGTAGCAGTGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQSCWSL*VAVELR
Trigger: CCTCAACTCCACTGCTACCCAGAGACTCCAGCAGGA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTCCTGCTGGAGTCTCTaGGTAGCAGTGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLSCWSL*VAVELR
Trigger: CCTCAACTCCACTGCTACCCAGAGACTCCAGCAGGA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCCCTGCTGATCAGATCTaGCTGCCTCATTCATGGGTA +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSPADQI*LPHSWV
Trigger: TACCCATGAATGAGGCAGCCAGATCTGATCAGCAGG...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGCCCACAGGTGCTGCTaGCTGCGGGTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYAHRCC*LRVAGH
Trigger: GTGCCCAGCAACCCGCAGCCAGCAGCACCTGTGGGC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGCTGGGCTTTCTGATTaGCTTGGCTTCGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSAGLSD*LGFVLL
Trigger: AAGAAGCACGAAGCCAAGCCAATCAGAAAGCCCAGC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TCCTTGAGCCTCTCTCTCTTTTTCCTCAGGCTTCGCCCACGACTGAAGCGCAAGACTCGTCAGTTTAACTaGACATCCCTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SLSLSLFFLRLRPRLKRKTRQFN*TSLSSF
Trigger: AAAAGAACTCAGGGATGTCCAGTTAAACTGACGAGT...CTTGCGCTTCAGTCGTGGGCGAAGCCTGAGGAAAAAGAGAGAGAGGCTCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR TCA 90 bp TGTCCCACTTCTTCAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTCAGAAGATGTCTTTATaGATATGCCATCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: CPTSSGMGIWPKLCNHGPQKMSL*ICHLRD
Trigger: GTCCCGAAGATGGCATATTCATAAAGACATCTTCTG...AGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTGAAGAAGTGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTACGAGAAGGCGCTCTaGAAGTGCAGCGACCGCATC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNYEKAL*KCSDRI
Trigger: GATGCGGTCGCTGCACTTTCAGAGCGCCTTCTCGTA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTAGGGCAGCAGCAACGTaGAGTGCTGTGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSRAAAT*SAVSPA
Trigger: GGCTGGAGACACAGCACTTCACGTTGCTGCTGCCCT...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR TCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATTGGCCACCTTCTTGTaGTTTAGGGCAGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQLATFL*FRAAAT
Trigger: CGTTGCTGCTGCCCTAAATCACAAGAAGGTGGCCAA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGGGGGTGTCTCCTGCTaGGACACTGCCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSGGVSC*DTALAL
Trigger: CAAAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGGGTTCTGGGGAGGCTaGCAGGAACTCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSGFWGG*QELFSG
Trigger: GCCAGAGAAGAGTTCCTGTCAGCCTCCCCAGAACCC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGGGTTCTGGGGAGGCTaGCAGGAACTCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSGFWGG*QELFSG
Trigger: GCCAGAGAAGAGTTCCTGTCAGCCTCCCCAGAACCC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR TCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGGGTGGGGGTGGGGATaGACACCGATGCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNGWGWG*TPMPVP
Trigger: AGGAACAGGCATCGGTGTTCATCCCCACCCCCACCC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGTATTCATTTTGTCCTaGACCGATCCCAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSVFILS*TDPSSA
Trigger: AGCAGAGCTGGGATCGGTTCAGGACAAAATGAATAC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAATGCTTCTCTGTGTCTaGGTGCTGTTGCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQMLLCV*VLLQAV
Trigger: AACCGCCTGCAACAGCACTCAGACACAGAGAAGCAT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGATGCTTCTCTGTGTCTaGGTGCTGTTGCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLMLLCV*VLLQAV
Trigger: AACCGCCTGCAACAGCACTCAGACACAGAGAAGCAT...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGAGGCTGTCTGGACCTTaGCGTTTCTCAGTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQRLSGP*RFSVGS
Trigger: GCTCCCGACTGAGAAACGTCAAGGTCCAGACAGCCT...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATAGGCTGTCTGGACCTTaGCGTTTCTCAGTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNRLSGP*RFSVGS
Trigger: GCTCCCGACTGAGAAACGTCAAGGTCCAGACAGCCT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTTTTGAGTGCCTCTGTTaGCGCAGGGCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSFECLC*RRAQPA
Trigger: AGCAGGCTGGGCCCTGCGTCAACAGAGGCACTCAAA...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR TCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGAGGTGTCCCGAATGTaGGGGCCAGTCTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNEVSRM*GPVCSL
Trigger: CAGCGAGCAGACTGGCCCTCACATTCGGGACACCTC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGAGGTGTCCCGAATGTaGGGGCCAGTCTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWEVSRM*GPVCSL
Trigger: CAGCGAGCAGACTGGCCCTCACATTCGGGACACCTC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTCTTGCTGGGCTTTCTaGTTGGCTTGGCTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLSCWAF*LAWLRA
Trigger: AGCACGAAGCCAAGCCAATCAGAAAGCCCAGCAAGA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGTCTTCTGGCCTCCATaGAGTTGGGGAACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNVFWPP*SWGTVG
Trigger: CCCCACTGTTCCCCAACTTCATGGAGGCCAGAAGAC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGTTAGCCTCCTCTGCTaGTGCTGGCCAAATCACATC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQVSLLC*CWPNHI
Trigger: GATGTGATTTGGCCAGCATCAGCAGAGGAGGCTAAC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTTCTGGCAGGCCAGGTaGAGAGCTGTGTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWFWQAR*RAVFPA
Trigger: GGCGGGGAACACAGCTCTGCACCTGGCCTGCCAGAA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGCAGGAGGACGCGCGTaGTCTGGGAGTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWAGGRA*SGSGCS
Trigger: AGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCAACCGATCCCAGCTCTaGTTTTATCTCCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSNRSQL*FYLLHS
Trigger: ACTGTGGAGGAGATAAAAGCAGAGCTGGGATCGGTT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGCACTCCGTCCTCTCTaGAGAAAGTCGCTCAACCAT +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQALRPL*RKSLNH
Trigger: ATGGTTGAGCGACTTTCTGCAGAGAGGACGGAGTGC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGTGTCTGAGTGCTGTTaGAGGCGGTTCAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNVSECC*RRFRHS
Trigger: GGAGTGCCTGAACCGCCTGCAACAGCACTCAGACAC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCGTTTCTCCCCCTCATaGTTCTCTGTGTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLRFSPS*FSVSEC
Trigger: GCACTCAGACACAGAGAAGCATGAGGGGGAGAAACG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACGTTTCTCCCCCTCATaGTTCTCTGTGTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQRFSPS*FSVSEC
Trigger: GCACTCAGACACAGAGAAGCATGAGGGGGAGAAACG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGGAGCTGTCGGAAGCTaGTGCTGGACCTGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSGAVGS*CWTCSH
Trigger: GTGACTGCAGGTCCAGCAGCAGCTTCCGACAGCTCC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGGAGCTGTCGGAAGCTaGTGCTGGACCTGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSGAVGS*CWTCSH
Trigger: GTGACTGCAGGTCCAGCAGCAGCTTCCGACAGCTCC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGGTTGCTGGGCACGATaGCTTGTTGGCCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNGCWAR*LVGPLF
Trigger: GAAGAGTGGGCCAACAAGGCATCGTGCCCAGCAACC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp CAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGAGTGCACGGAGAGTACAAGAGCTaGTGGTCGTGTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: QLSIWLRAKYSPCPYRVHGEYKS*WSCSFW
Trigger: CCAAAAGGAACACGACCAGCAGCTCTTGTACTCTCC...GTGCACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGAAGATGGCCCTTATTaGCAGCAAGATGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLEDGPY*QQDAGE
Trigger: CTCCCCTGCATCTTGCTGCCAATAAGGGCCATCTTC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCGGTGCAAGGCGGTCTaGTCCCCATCATCCTGGACA +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSRCKAV*SPSSWT
Trigger: TGTCCAGGATGATGGGGACCAGACCGCCTTGCACCG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTGTTCCCCACCACTGTaGCCCGGTGCAAGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWCSPPL*PGARRS
Trigger: AGACCGCCTTGCACCGGGCCACAGTGGTGGGGAACA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGTCCCCGCCTTGTTCTTaGCAAGCACGTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQSPPCS*QARWLL
Trigger: CAGGAGCCAACGTGCTTGCCAAGAACAAGGCGGGGA...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTCCCCGCCTTGTTCTTaGCAAGCACGTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNSPPCS*QARWLL
Trigger: CAGGAGCCAACGTGCTTGCCAAGAACAAGGCGGGGA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACAGGACGCGCGTGCTCTaGGAGTGGCTGTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNRTRVL*EWLFWQ
Trigger: CTGCCAGAACAGCCACTCCCAGAGCACGCGCGTCCT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAGGACGCGCGTGCTCTaGGAGTGGCTGTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWRTRVL*EWLFWQ
Trigger: CTGCCAGAACAGCCACTCCCAGAGCACGCGCGTCCT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAAGCTGTGTCTCCAGCCTaGTTCTTTTCATGGACAGAA +
Preference number: 4 (lower is better)
Translates to: MGIWPKLCNHGPVLRCLKAVSPA*FFSWTE
Trigger: TTCTGTCCATGAAAAGAACCAGGCTGGAGACACAGC...TTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp CTTGAGCCTCTCTCTCTTTTTCCTCAGGCTTCGCCCACGACTGAAGCGCAAGACCTTCCAGTAAGATTTTaGCCACCTTCTTGTGATTTA +
Preference number: 4 (lower is better)
Translates to: LEPLSLFPQASPTTEAQDLPVRF*PPSCDL
Trigger: TAAATCACAAGAAGGTGGCCAAAATCTTACTGGAAG...GTCTTGCGCTTCAGTCGTGGGCGAAGCCTGAGGAAAAAGAGAGAGAGGCTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATGTCATCCTTTGCTCTaGGTTCTGGGGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQCHPLL*VLGRLT
Trigger: TGTCAGCCTCCCCAGAACCCAGAGCAAAGGATGACA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGGGTCGGCTGGTGGGGTaGGGTCAGAAAATGCTGACA +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQGRLVG*GQKMLT
Trigger: TGTCAGCATTTTCTGACCCCACCCCACCAGCCGACC...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGGTCGGCTGGTGGGGTaGGGTCAGAAAATGCTGACA +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNGRLVG*GQKMLT
Trigger: TGTCAGCATTTTCTGACCCCACCCCACCAGCCGACC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGCTGTTGGTCGGCTGGTaGGGTGGGGTCAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQLLVGW*GGVRKC
Trigger: GCATTTTCTGACCCCACCCCACCAGCCGACCAACAG...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTTGGTCGGCTGGTaGGGTGGGGTCAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNLLVGW*GGVRKC
Trigger: GCATTTTCTGACCCCACCCCACCAGCCGACCAACAG...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCACACGCATTTGGTGCTaGGTCTTATTCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSTRIWC*VLFSIC
Trigger: GCAGATGGAGAATAAGACCCAGCACCAAATGCGTGT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTTTGGGCCTAACCACTaGAGGGGAGCTGTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNFGPNH*RGAVGS
Trigger: GCTTCCGACAGCTCCCCTCCAGTGGTTAGGCCCAAA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTACGAGAAGGCGCTCTaGAAGTGCAGCGACCGCATC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSYEKAL*KCSDRI
Trigger: GATGCGGTCGCTGCACTTTCAGAGCGCCTTCTCGTA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTTACGAGAAGGCGCTCTaGAAGTGCAGCGACCGCATC +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSYEKAL*KCSDRI
Trigger: GATGCGGTCGCTGCACTTTCAGAGCGCCTTCTCGTA...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR TCA 90 bp AACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTCCCTTGTTGATGAGCTaGACCACATTCTCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: NSAIMALSCDVLNWNFFLPLLMS*TTFSVW
Trigger: CCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGG...AAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAGGGCAGCAGCAACGTaGAGTGCTGTGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWRAAAT*SAVSPA
Trigger: GGCTGGAGACACAGCACTTCACGTTGCTGCTGCCCT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGGGGGTGTCTCCTGCTaGGACACTGCCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNGGVSC*DTALAL
Trigger: CAAAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGGGTGGGGGTGGGGATaGACACCGATGCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYGWGWG*TPMPVP
Trigger: AGGAACAGGCATCGGTGTTCATCCCCACCCCCACCC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACAGAGCTGATACGCCCTaGACTCATGGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNRADTP*THGVGV
Trigger: CACCCCCACCCCATGAGTTCAGGGCGTATCAGCTCT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGAGTATGCTTCTCTGTGTCTaGGTGCTGTTGCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: IATEYMVTSKIQSLPLQSMLLCV*VLLQAV
Trigger: AACCGCCTGCAACAGCACTCAGACACAGAGAAGCAT...ACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTTTGAGTGCCTCTGTTaGCGCAGGGCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWFECLC*RRAQPA
Trigger: AGCAGGCTGGGCCCTGCGTCAACAGAGGCACTCAAA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCCAGACTTCTTAGTTTaGGTGCCTCTGTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLPDFLV*VPLLTQ
Trigger: CTGCGTCAACAGAGGCACTCAAACTAAGAAGTCTGG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGTCTTCTGGCCTCCATaGAGTTGGGGAACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSVFWPP*SWGTVG
Trigger: CCCCACTGTTCCCCAACTTCATGGAGGCCAGAAGAC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTAGGCCAAGGCTGCAGTaGGGTGTGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSRPRLQ*GVIMPL
Trigger: CAGTGGCATGATCACACCTCACTGCAGCCTTGGCCT...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTGCCAGGATGCTTCATaGAAGGCTGTATTCCCATCC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLCQDAS*KAVFPS
Trigger: GGATGGGAATACAGCCTTGCATGAAGCATCCTGGCA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGAAACCATGCCAGGATaGTTCATGCAAGGCTGTATT +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSETMPG*FMQGCI
Trigger: AATACAGCCTTGCATGAAGCATCCTGGCATGGTTTC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR GCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACTTCTGGCAGGCCAGGTaGAGAGCTGTGTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYFWQAR*RAVFPA
Trigger: GGCGGGGAACACAGCTCTGCACCTGGCCTGCCAGAA...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCCTCCTGTCATCCTTTaGTCTGGGTTCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSPPVIL*SGFWGG
Trigger: GCCTCCCCAGAACCCAGAGCAAAGGATGACAGGAGG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGGTTGCTGGGCACGATaGCTTGTTGGCCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSGCWAR*LVGPLF
Trigger: GAAGAGTGGGCCAACAAGGCATCGTGCCCAGCAACC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGCCTATACCTCCACTaGCTGGTTACATTCCATATT +
Preference number: 4 (lower is better)
Translates to: WAFGLNSAIMALSCDVLNCLYLH*LVTFHI
Trigger: AATATGGAATGTAACCAGGCAGTGGAGGTATAGGCA...GTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp AACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTATTTGGCCTAAACTCTaGAATCATGGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: NSAIMALSCDVLNWNFFLIWPKL*NHGPVL
Trigger: CAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAAT...AAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp GCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGAGTGCACTTGCCCCTACAGAGTaGACTTTACCATCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: ATEYMVTSKIQSLPLQSALAPTE*TLPSSV
Trigger: AACACTGGATGGTAAAGTGCACTCTGTAGGGGCAAG...TGCACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTCAACACGAAGTCACTaGCCCGGCCTGGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNSTRSH*PGLAPR
Trigger: TCTGGGTGCCAGGCCGGGCCAGTGACTTCGTGTTGA...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTCAACACGAAGTCACTaGCCCGGCCTGGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWSTRSH*PGLAPR
Trigger: TCTGGGTGCCAGGCCGGGCCAGTGACTTCGTGTTGA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGCCTTCAGCAAGATCTaGACCACAGGAAGATGGCCC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNAFSKI*TTGRWP
Trigger: GGGCCATCTTCCTGTGGTCCAGATCTTGCTGAAGGC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGTGGTCCCCATCATCCTaGACATCAAGGTCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQWSPSS*TSRSQP
Trigger: TGGCTGCGACCTTGATGTCCAGGATGATGGGGACCA...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCGGTGCAAGGCGGTCTaGTCCCCATCATCCTGGACA +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNRCKAV*SPSSWT
Trigger: TGTCCAGGATGATGGGGACCAGACCGCCTTGCACCG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAGGGCACACCCTTCGTaGATGAGCGCCGCGATGATC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWRAHPS*MSAAMI
Trigger: GATCATCGCGGCGCTCATCCACGAAGGGTGTGCCCT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACAGGGCACACCCTTCGTaGATGAGCGCCGCGATGATC +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNRAHPS*MSAAMI
Trigger: GATCATCGCGGCGCTCATCCACGAAGGGTGTGCCCT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGTCTCCAGCGGAGTCTaGCCTGCATTGTTAACAATG +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLVSSGV*PALLTM
Trigger: CATTGTTAACAATGCAGGCCAGACTCCGCTGGAGAC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCTGAAGCGCAAGACCTaGGGAGCTTTAGTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLLKRKT*GALVRR
Trigger: TCTCCTTACTAAAGCTCCCCAGGTCTTGCGCTTCAG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCAGCCTGTTCACTGCTaGGGGTGTCTCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSQPVHC*GCLLLR
Trigger: TCTCAGCAGGAGACACCCCCAGCAGTGAACAGGCTG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCAGCCTGTTCACTGCTaGGGGTGTCTCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSQPVHC*GCLLLR
Trigger: TCTCAGCAGGAGACACCCCCAGCAGTGAACAGGCTG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATGGCTTCTTCTTTTCTaGCCACAGCCTGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQWLLLF*PQPVHC
Trigger: GCAGTGAACAGGCTGTGGCCAGAAAAGAAGAAGCCA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGGTCGGCTGGTGGGGTaGGGTCAGAAAATGCTGACA +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSGRLVG*GQKMLT
Trigger: TGTCAGCATTTTCTGACCCCACCCCACCAGCCGACC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGGTCGGCTGGTGGGGTaGGGTCAGAAAATGCTGACA +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSGRLVG*GQKMLT
Trigger: TGTCAGCATTTTCTGACCCCACCCCACCAGCCGACC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTAGGCTGTTGGTCGGCTaGTGGGGTGGGGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSRLLVG*WGGVRK
Trigger: TTTTCTGACCCCACCCCACCAGCCGACCAACAGCCT...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGGCATGCAGGTTCTTCTaGTGTCCAGGCTGTTGGTCG +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQACRFF*CPGCWS
Trigger: CGACCAACAGCCTGGACACCAGAAGAACCTGCATGC...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTCCAAAACACGCATTTaGTGCTGGGTCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSSKTRI*CWVLFS
Trigger: GGAGAATAAGACCCAGCACCAAATGCGTGTTTTGGA...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGCAGTCACCACTAATTaGTCCACACCTGTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLAVTTN*STPVED
Trigger: GTCCTCTACAGGTGTGGACCAATTAGTGGTGACTGC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGCAGTCACCACTAATTaGTCCACACCTGTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQAVTTN*STPVED
Trigger: GTCCTCTACAGGTGTGGACCAATTAGTGGTGACTGC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTTTGGGCCTAACCACTaGAGGGGAGCTGTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSFGPNH*RGAVGS
Trigger: GCTTCCGACAGCTCCCCTCCAGTGGTTAGGCCCAAA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGGTAGCAAGGCTGTCTaGACCTTGACGTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLGSKAV*TLTFLS
Trigger: ACTGAGAAACGTCAAGGTCCAGACAGCCTTGCTACC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGCTGGGCTTTCTGATTaGCTTGGCTTCGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQAGLSD*LGFVLL
Trigger: AAGAAGCACGAAGCCAAGCCAATCAGAAAGCCCAGC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCCATCGTCCAGTTTCTTaGCATGGCTTGCTTAATCTG +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSHRPVS*HGLLNL
Trigger: CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATG...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp CCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCTGGAACTTCTTCCTTaGCTGAGTAGCTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: PKLCNHGPVLRCLKLELLLELLP*LSSWET
Trigger: AGTTTCCCAGCTACTCAGCCAAGGAAGAAGTTCCAG...AAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CCA 90 bp ATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGAGTAGGGCTCTCTGTGTGTaGGTTACCTGTAGAGGACTC +
Preference number: 4 (lower is better)
Translates to: IATEYMVTSKIQSLPLQSRALCV*VTCRGL
Trigger: GAGTCCTCTACAGGTAACCCACACACAGAGAGCCCT...ACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR TCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTACGAGAAGGCGCTCTaGAAGTGCAGCGACCGCATC +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNYEKAL*KCSDRI
Trigger: GATGCGGTCGCTGCACTTTCAGAGCGCCTTCTCGTA...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACAGGGCAGCAGCAACGTaGAGTGCTGTGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYRAAAT*SAVSPA
Trigger: GGCTGGAGACACAGCACTTCACGTTGCTGCTGCCCT...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTTGGCCACCTTCTTGTaGTTTAGGGCAGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNLATFL*FRAAAT
Trigger: CGTTGCTGCTGCCCTAAATCACAAGAAGGTGGCCAA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACAGGCTGTCTGGACCTTaGCGTTTCTCAGTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNRLSGP*RFSVGS
Trigger: GCTCCCGACTGAGAAACGTCAAGGTCCAGACAGCCT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAGGCCAAGGCTGCAGTaGGGTGTGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWRPRLQ*GVIMPL
Trigger: CAGTGGCATGATCACACCTCACTGCAGCCTTGGCCT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTACCTGCGTAGTAGTTaGGAACAAGACAAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLYLRSS*EQDKLP
Trigger: TGGGAGCTTGTCTTGTTCTCAACTACTACGCAGGTA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGAGCAGCAACGTGAAGTaGTGTGTCTCCAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQSSNVK*CVSSLV
Trigger: AACCAGGCTGGAGACACAGCACTTCACGTTGCTGCT...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCTGAGACACTGCCCTTaGTTTGGGCCACCTCATCTC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSLRHCP*FGPPHL
Trigger: GAGATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCTGAGACACTGCCCTTaGTTTGGGCCACCTCATCTC +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSLRHCP*FGPPHL
Trigger: GAGATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR GCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCTCCTGCTGAGACACTaGCCTTGCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNLLLRH*PCFGPP
Trigger: AGGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCCTCCTGTCATCCTTTaGTCTGGGTTCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNPPVIL*SGFWGG
Trigger: GCCTCCCCAGAACCCAGAGCAAAGGATGACAGGAGG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCCTCCTGTCATCCTTTaGTCTGGGTTCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWPPVIL*SGFWGG
Trigger: GCCTCCCCAGAACCCAGAGCAAAGGATGACAGGAGG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATCACTTTCCCATCCTTaGCCCGGTACAATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQSLSHP*PGTMCR
Trigger: TCTACACATTGTACCGGGGCAAGGATGGGAAAGTGA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAACCGATCCCAGCTCTaGTTTTATCTCCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLNRSQL*FYLLHS
Trigger: ACTGTGGAGGAGATAAAAGCAGAGCTGGGATCGGTT...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCAAAACACGCATTTGGTaGTGGGTCTTATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSKTRIW*WVLFSI
Trigger: GATGGAGAATAAGACCCAGCACCAAATGCGTGTTTT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGGCACTCCGTCCTCTCTaGAGAAAGTCGCTCAACCAT +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQALRPL*RKSLNH
Trigger: ATGGTTGAGCGACTTTCTGCAGAGAGGACGGAGTGC...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGTGTCTGAGTGCTGTTaGAGGCGGTTCAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWVSECC*RRFRHS
Trigger: GGAGTGCCTGAACCGCCTGCAACAGCACTCAGACAC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTTCTCTGTGTCTGAGTaGTGTTGCAGGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNFSVSE*CCRRFR
Trigger: CCTGAACCGCCTGCAACAGCACTCAGACACAGAGAA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGAAGACGACAGCTCCTaGTGGAGTCTCTGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSEDDSS*WSLWVA
Trigger: TGCTACCCAGAGACTCCAGCAGGAGCTGTCGTCTTC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGGTTGCTGGGCACGATaGCTTGTTGGCCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWGCWAR*LVGPLF
Trigger: GAAGAGTGGGCCAACAAGGCATCGTGCCCAGCAACC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCATTGGCTTGGCTTCGTaGTTCTTCAATCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSIGLAS*FFNLPF
Trigger: GAAAGGAAGATTGAAGAAGCACGAAGCCAAGCCAAT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGCGTACTGCCTTTCAGTaGAGGAGAGTACAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: YIATEYMVTSKIQSLPLQRTAFQ*RRVQEL
Trigger: CAGCTCTTGTACTCTCCTGCACTGAAAGGCAGTACG...CTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTGTGGCTTGCTAGTCTaGTCGTCACAGCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLCGLLV*SSQLLK
Trigger: TTTCAGAAGCTGTGACGAGCAGACTAGCAAGCCACA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR CCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGTCACTGGCCCGGCCTaGCACCCAGAGGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYVTGPA*HPEVKM
Trigger: CATCTTTACCTCTGGGTGCCAGGCCGGGCCAGTGAC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACAGGGCACACCCTTCGTaGATGAGCGCCGCGATGATC +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYRAHPS*MSAAMI
Trigger: GATCATCGCGGCGCTCATCCACGAAGGGTGTGCCCT...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTCCCCGCCTTGTTCTTaGCAAGCACGTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWSPPCS*QARWLL
Trigger: CAGGAGCCAACGTGCTTGCCAAGAACAAGGCGGGGA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCAGCCTGTTCACTGCTaGGGGTGTCTCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWQPVHC*GCLLLR
Trigger: TCTCAGCAGGAGACACCCCCAGCAGTGAACAGGCTG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGTGTCATCCTTTGCTCTaGGTTCTGGGGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQCHPLL*VLGRLT
Trigger: TGTCAGCCTCCCCAGAACCCAGAGCAAAGGATGACA...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTGTCATCCTTTGCTCTaGGTTCTGGGGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNCHPLL*VLGRLT
Trigger: TGTCAGCCTCCCCAGAACCCAGAGCAAAGGATGACA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAAAAATGCTGACACCTTaGGCCTTGACTTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQKMLTP*ALTFSS
Trigger: GGAGGAGAAAGTCAAGGCCCAAGGTGTCAGCATTTT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAAAATGCTGACACCTTaGGCCTTGACTTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLKMLTP*ALTFSS
Trigger: GGAGGAGAAAGTCAAGGCCCAAGGTGTCAGCATTTT...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGGTCGGCTGGTGGGGTaGGGTCAGAAAATGCTGACA +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNGRLVG*GQKMLT
Trigger: TGTCAGCATTTTCTGACCCCACCCCACCAGCCGACC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCTGTTGGTCGGCTGGTaGGGTGGGGTCAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWLLVGW*GGVRKC
Trigger: GCATTTTCTGACCCCACCCCACCAGCCGACCAACAG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCTGTTGGTCGGCTGGTaGGGTGGGGTCAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNLLVGW*GGVRKC
Trigger: GCATTTTCTGACCCCACCCCACCAGCCGACCAACAG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACAGGCTGTTGGTCGGCTaGTGGGGTGGGGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNRLLVG*WGGVRK
Trigger: TTTTCTGACCCCACCCCACCAGCCGACCAACAGCCT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTACGCCCTGAACTCATaGGGTGGGGGTGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWYALNS*GGGGDE
Trigger: TTCATCCCCACCCCCACCCCATGAGTTCAGGGCGTA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAACACGCATTTGGTGCTaGGTCTTATTCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQTRIWC*VLFSIC
Trigger: GCAGATGGAGAATAAGACCCAGCACCAAATGCGTGT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTGGCTGCCTCATTCATaGGTAGCAAGGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNWLPHS*VARLSG
Trigger: TCCAGACAGCCTTGCTACCCATGAATGAGGCAGCCA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGTGGCTGCCTCATTCATaGGTAGCAAGGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQWLPHS*VARLSG
Trigger: TCCAGACAGCCTTGCTACCCATGAATGAGGCAGCCA...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGCTGAGACACTGCCCTaGGGAGCTTTAGTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNAETLP*GALVRR
Trigger: TCTCCTTACTAAAGCTCCCCAGGGCAGTGTCTCAGC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369408.9
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGCTTGCAATGTTTTGTaGCTTGCTAGTCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQACNVL*LASLLV
Trigger: GACGAGCAGACTAGCAAGCCACAAAACATTGCAAGC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR TCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACCTCCTGCATTATTTTTaGGGTCAGCGCGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYLLHYF*GQRGTR
Trigger: CCGGGTCCCGCGCTGACCTCAAAAATAATGCAGGAG...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGATTCTCCAGCTTGTTaGTTAGAGGTTCACATCGAC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQDSPAC*LEVHID
Trigger: GTCGATGTGAACCTCTAATCAACAAGCTGGAGAATC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAACAGTAGCCTCCAACTaGTTCTCCAGCTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQTVASN*FSSLLI
Trigger: AATCAACAAGCTGGAGAATCAGTTGGAGGCTACTGT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGACAGTAGCCTCCAACTaGTTCTCCAGCTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLTVASN*FSSLLI
Trigger: AATCAACAAGCTGGAGAATCAGTTGGAGGCTACTGT...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTATGCTTCTCTGTGTCTaGGTGCTGTTGCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSMLLCV*VLLQAV
Trigger: AACCGCCTGCAACAGCACTCAGACACAGAGAAGCAT...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp GCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGAGTGCATTCTGCTCCAGATTCTaGATCTTTAACATGCACCAG +
Preference number: 4 (lower is better)
Translates to: ATEYMVTSKIQSLPLQSAFCSRF*IFNMHQ
Trigger: CTGGTGCATGTTAAAGATTCAGAATCTGGAGCAGAA...TGCACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCCAGACTTCTTAGTTTaGGTGCCTCTGTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNPDFLV*VPLLTQ
Trigger: CTGCGTCAACAGAGGCACTCAAACTAAGAAGTCTGG...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGTGCCAGGATGCTTCATaGAAGGCTGTATTCCCATCC +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQCQDAS*KAVFPS
Trigger: GGATGGGAATACAGCCTTGCATGAAGCATCCTGGCA...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTGCCAGGATGCTTCATaGAAGGCTGTATTCCCATCC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNCQDAS*KAVFPS
Trigger: GGATGGGAATACAGCCTTGCATGAAGCATCCTGGCA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGAAACCATGCCAGGATaGTTCATGCAAGGCTGTATT +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLETMPG*FMQGCI
Trigger: AATACAGCCTTGCATGAAGCATCCTGGCATGGTTTC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR GCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGGACTGGCTGAAACCATaGCAGGATGCTTCATGCAAG +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQDWLKP*QDASCK
Trigger: CTTGCATGAAGCATCCTGGCATGGTTTCAGCCAGTC...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGACTGGCTGAAACCATaGCAGGATGCTTCATGCAAG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNDWLKP*QDASCK
Trigger: CTTGCATGAAGCATCCTGGCATGGTTTCAGCCAGTC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR GCA 90 bp AACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTCAAACAGGTGTCTCCTaGATTATTTTTGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NSAIMALSCDVLNWNFFLQTGVS*IIFEVS
Trigger: GCTGACCTCAAAAATAATGCAGGAGACACCTGTTTG...AAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTAGCAGCAACGTGAAGTaGTGTGTCTCCAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSSSNVK*CVSSLV
Trigger: AACCAGGCTGGAGACACAGCACTTCACGTTGCTGCT...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTAGCAGCAACGTGAAGTaGTGTGTCTCCAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSSSNVK*CVSSLV
Trigger: AACCAGGCTGGAGACACAGCACTTCACGTTGCTGCT...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCTGAGACACTGCCCTTaGTTTGGGCCACCTCATCTC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWLRHCP*FGPPHL
Trigger: GAGATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACCATTTATTGGTGCCTaGATCACTTTCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQPFIGA*ITFPSL
Trigger: CAAGGATGGGAAAGTGATGCAGGCACCAATAAATGG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCCATTTATTGGTGCCTaGATCACTTTCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLPFIGA*ITFPSL
Trigger: CAAGGATGGGAAAGTGATGCAGGCACCAATAAATGG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGTCTTATTCTCCATCTaGCCCAGCTTTGTATTCATT +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSVLFSI*PSFVFI
Trigger: AATGAATACAAAGCTGGGGCAGATGGAGAATAAGAC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGCACTCCGTCCTCTCTaGAGAAAGTCGCTCAACCAT +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSALRPL*RKSLNH
Trigger: ATGGTTGAGCGACTTTCTGCAGAGAGGACGGAGTGC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCGTTTCTCCCCCTCATaGTTCTCTGTGTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSRFSPS*FSVSEC
Trigger: GCACTCAGACACAGAGAAGCATGAGGGGGAGAAACG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGAAGACGACAGCTCCTaGTGGAGTCTCTGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWEDDSS*WSLWVA
Trigger: TGCTACCCAGAGACTCCAGCAGGAGCTGTCGTCTTC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGGTTGCTGGGCACGATaGCTTGTTGGCCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYGCWAR*LVGPLF
Trigger: GAAGAGTGGGCCAACAAGGCATCGTGCCCAGCAACC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCGTTACAATGTTCGCTaGCTTTTCCCGTTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNRYNVR*LFPLAS
Trigger: GGAGGCTAACGGGAAAAGGCAGCGAACATTGTAACG...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGAAGATGGCCCTTATTaGCAGCAAGATGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSEDGPY*QQDAGE
Trigger: CTCCCCTGCATCTTGCTGCCAATAAGGGCCATCTTC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGAAGATGGCCCTTATTaGCAGCAAGATGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSEDGPY*QQDAGE
Trigger: CTCCCCTGCATCTTGCTGCCAATAAGGGCCATCTTC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTGGACCACAGGAAGATaGCCCTTATTGGCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNWTTGR*PLLAAR
Trigger: TCTTGCTGCCAATAAGGGCCATCTTCCTGTGGTCCA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGCCTTCAGCAAGATCTaGACCACAGGAAGATGGCCC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWAFSKI*TTGRWP
Trigger: GGGCCATCTTCCTGTGGTCCAGATCTTGCTGAAGGC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACAGGCTGTTGGTCGGCTaGTGGGGTGGGGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYRLLVG*WGGVRK
Trigger: TTTTCTGACCCCACCCCACCAGCCGACCAACAGCCT...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGCATGCAGGTTCTTCTaGTGTCCAGGCTGTTGGTCG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNACRFF*CPGCWS
Trigger: CGACCAACAGCCTGGACACCAGAAGAACCTGCATGC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGCATGCAGGTTCTTCTaGTGTCCAGGCTGTTGGTCG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWACRFF*CPGCWS
Trigger: CGACCAACAGCCTGGACACCAGAAGAACCTGCATGC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACTACGCCCTGAACTCATaGGGTGGGGGTGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYYALNS*GGGGDE
Trigger: TTCATCCCCACCCCCACCCCATGAGTTCAGGGCGTA...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATCGACAACCATTTATTaGTGCCTGCATCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQSTTIY*CLHHFP
Trigger: GGGAAAGTGATGCAGGCACCAATAAATGGTTGTCGA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATCCAAAACACGCATTTaGTGCTGGGTCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQSKTRI*CWVLFS
Trigger: GGAGAATAAGACCCAGCACCAAATGCGTGTTTTGGA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTCCAAAACACGCATTTaGTGCTGGGTCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLSKTRI*CWVLFS
Trigger: GGAGAATAAGACCCAGCACCAAATGCGTGTTTTGGA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTCCTGCTGGAGTCTCTaGGTAGCAGTGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWSCWSL*VAVELR
Trigger: CCTCAACTCCACTGCTACCCAGAGACTCCAGCAGGA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTTGGCTGCCTCATTCATaGGTAGCAAGGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSWLPHS*VARLSG
Trigger: TCCAGACAGCCTTGCTACCCATGAATGAGGCAGCCA...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTGGCTGCCTCATTCATaGGTAGCAAGGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSWLPHS*VARLSG
Trigger: TCCAGACAGCCTTGCTACCCATGAATGAGGCAGCCA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCCTGCTGATCAGATCTaGCTGCCTCATTCATGGGTA +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNPADQI*LPHSWV
Trigger: TACCCATGAATGAGGCAGCCAGATCTGATCAGCAGG...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTACCACTTTTCCATCTaGGTAGAAACAGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSYHFSI*VETASK
Trigger: TTTTGAGGCTGTTTCTACCCAGATGGAAAAGTGGTA...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCATCGTCCAGTTTCTTaGCATGGCTTGCTTAATCTG +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLHRPVS*HGLLNL
Trigger: CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGTGGTCGTGTTCCTTTTaGACAAAAGGGCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: YIATEYMVTSKIQSLPLQWSCSF*TKGLSV
Trigger: CACAGAGAGCCCTTTTGTCCAAAAGGAACACGACCA...CTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR TCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCAGAAGATGTCTTTATaGATATGCCATCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLQKMSL*ICHLRD
Trigger: GTCCCGAAGATGGCATATTCATAAAGACATCTTCTG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCCCTTGTTGATGAGCTaGACCACATTCTCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNPLLMS*TTFSVW
Trigger: CCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGG...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTTGGCCACCTTCTTGTaGTTTAGGGCAGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWLATFL*FRAAAT
Trigger: CGTTGCTGCTGCCCTAAATCACAAGAAGGTGGCCAA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGTATTCATTTTGTCCTaGACCGATCCCAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNVFILS*TDPSSA
Trigger: AGCAGAGCTGGGATCGGTTCAGGACAAAATGAATAC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCCAGACTTCTTAGTTTaGGTGCCTCTGTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSPDFLV*VPLLTQ
Trigger: CTGCGTCAACAGAGGCACTCAAACTAAGAAGTCTGG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACAGCAGCAACGTGAAGTaGTGTGTCTCCAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNSSNVK*CVSSLV
Trigger: AACCAGGCTGGAGACACAGCACTTCACGTTGCTGCT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAACAACCATTTATTGGTaGCTGCATCACTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQTTIYW*LHHFPI
Trigger: GATGGGAAAGTGATGCAGGCACCAATAAATGGTTGT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAAAAACACGCATTTGGTaGTGGGTCTTATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQKTRIW*WVLFSI
Trigger: GATGGAGAATAAGACCCAGCACCAAATGCGTGTTTT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TATTATTACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCGCACTCCGTCCTCTCTaGAGAAAGTCGCTCAACCAT +
Preference number: 4 (lower is better)
Translates to: YYYIATEYMVTSKIQSLPALRPL*RKSLNH
Trigger: ATGGTTGAGCGACTTTCTGCAGAGAGGACGGAGTGC...GGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTAATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTTCTCTGTGTCTGAGTaGTGTTGCAGGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWFSVSE*CCRRFR
Trigger: CCTGAACCGCCTGCAACAGCACTCAGACACAGAGAA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TATTATTACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCTTCTCTGTGTCTGAGTaGTGTTGCAGGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: YYYIATEYMVTSKIQSLPFSVSE*CCRRFR
Trigger: CCTGAACCGCCTGCAACAGCACTCAGACACAGAGAA...GGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTAATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR GCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTTCTCTGTGTCTGAGTaGTGTTGCAGGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNFSVSE*CCRRFR
Trigger: CCTGAACCGCCTGCAACAGCACTCAGACACAGAGAA...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGAAGACGACAGCTCCTaGTGGAGTCTCTGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYEDDSS*WSLWVA
Trigger: TGCTACCCAGAGACTCCAGCAGGAGCTGTCGTCTTC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCAGTTATCGAATATTTTaGCTTCACCGCAAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSSYRIF*LHRKAV
Trigger: TACTGCTTTGCGGTGAAGGCAAAATATTCGATAACT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp TACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGGCAAAATACAGTCCTTaGCCCTACAGAGTGCACTTT +
Preference number: 4 (lower is better)
Translates to: YIATEYMVTSKIQSLPLQAKYSP*PYRVHF
Trigger: AAAGTGCACTCTGTAGGGGCAAGGACTGTATTTTGC...CTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGACATCCATTCAGCTTaGAATGTTTTGTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQDIHSA*NVLWLA
Trigger: AGCAAGCCACAAAACATTGCAAGCTGAATGGATGTC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTTGGACCACAGGAAGATaGCCCTTATTGGCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSWTTGR*PLLAAR
Trigger: TCTTGCTGCCAATAAGGGCCATCTTCCTGTGGTCCA...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGCTGTGTCTCCAGCCTaGTTCTTTTCATGGACAGAA +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNAVSPA*FFSWTE
Trigger: TTCTGTCCATGAAAAGAACCAGGCTGGAGACACAGC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCTGAAGCGCAAGACCTaGGGAGCTTTAGTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSLKRKT*GALVRR
Trigger: TCTCCTTACTAAAGCTCCCCAGGTCTTGCGCTTCAG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTGGCTTCTTCTTTTCTaGCCACAGCCTGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSWLLLF*PQPVHC
Trigger: GCAGTGAACAGGCTGTGGCCAGAAAAGAAGAAGCCA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTTGGCTTCTTCTTTTCTaGCCACAGCCTGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSWLLLF*PQPVHC
Trigger: GCAGTGAACAGGCTGTGGCCAGAAAAGAAGAAGCCA...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTGTCATCCTTTGCTCTaGGTTCTGGGGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWCHPLL*VLGRLT
Trigger: TGTCAGCCTCCCCAGAACCCAGAGCAAAGGATGACA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATACACGCATTTGGTGCTaGGTCTTATTCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNTRIWC*VLFSIC
Trigger: GCAGATGGAGAATAAGACCCAGCACCAAATGCGTGT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGTCCAAAACACGCATTTaGTGCTGGGTCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: YIATEYMVTSKIQSLPLQSKTRI*CWVLFS
Trigger: GGAGAATAAGACCCAGCACCAAATGCGTGTTTTGGA...CTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR CCA 90 bp TACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGGGACTCACAAGTAGATaGTGTGGATTTAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YIATEYMVTSKIQSLPLQGLTSR*CGFSSA
Trigger: TGCAGAGCTAAATCCACACCATCTACTTGTGAGTCC...CTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGGTAGCAAGGCTGTCTaGACCTTGACGTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSGSKAV*TLTFLS
Trigger: ACTGAGAAACGTCAAGGTCCAGACAGCCTTGCTACC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCCTGCTGATCAGATCTaGCTGCCTCATTCATGGGTA +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSPADQI*LPHSWV
Trigger: TACCCATGAATGAGGCAGCCAGATCTGATCAGCAGG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGCTGGGCTTTCTGATTaGCTTGGCTTCGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSAGLSD*LGFVLL
Trigger: AAGAAGCACGAAGCCAAGCCAATCAGAAAGCCCAGC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp ATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAATATACCTCCACTGCCTaGTTACATTCCATATTTAAG +
Preference number: 4 (lower is better)
Translates to: MGIWPKLCNHGPVLRCLKYTSTA*LHSIFK
Trigger: CTTAAATATGGAATGTAACCAGGCAGTGGAGGTATA...TTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR TCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCCCTTGTTGATGAGCTaGACCACATTCTCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSPLLMS*TTFSVW
Trigger: CCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCCCTTGTTGATGAGCTaGACCACATTCTCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSPLLMS*TTFSVW
Trigger: CCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGATTCTCCAGCTTGTTaGTTAGAGGTTCACATCGAC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNDSPAC*LEVHID
Trigger: GTCGATGTGAACCTCTAATCAACAAGCTGGAGAATC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGTATTCATTTTGTCCTaGACCGATCCCAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSVFILS*TDPSSA
Trigger: AGCAGAGCTGGGATCGGTTCAGGACAAAATGAATAC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR TCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACATGCTTCTCTGTGTCTaGGTGCTGTTGCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYMLLCV*VLLQAV
Trigger: AACCGCCTGCAACAGCACTCAGACACAGAGAAGCAT...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCCAGACTTCTTAGTTTaGGTGCCTCTGTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNPDFLV*VPLLTQ
Trigger: CTGCGTCAACAGAGGCACTCAAACTAAGAAGTCTGG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACTCTTGCTGGGCTTTCTaGTTGGCTTGGCTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYSCWAF*LAWLRA
Trigger: AGCACGAAGCCAAGCCAATCAGAAAGCCCAGCAAGA...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCAGTGGGGCCTAAGTTaGGTTATCGAATATTTTGCC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNQWGLS*VIEYFA
Trigger: GGCAAAATATTCGATAACTCAACTTAGGCCCCACTG...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGCCAGGATGCTTCATaGAAGGCTGTATTCCCATCC +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNCQDAS*KAVFPS
Trigger: GGATGGGAATACAGCCTTGCATGAAGCATCCTGGCA...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTTCACTTTCCCATCCTTaGCCCGGTACAATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSSLSHP*PGTMCR
Trigger: TCTACACATTGTACCGGGGCAAGGATGGGAAAGTGA...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTCACTTTCCCATCCTTaGCCCGGTACAATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSSLSHP*PGTMCR
Trigger: TCTACACATTGTACCGGGGCAAGGATGGGAAAGTGA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTAACCGATCCCAGCTCTaGTTTTATCTCCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSNRSQL*FYLLHS
Trigger: ACTGTGGAGGAGATAAAAGCAGAGCTGGGATCGGTT...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR GCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGTCTTATTCTCCATCTaGCCCAGCTTTGTATTCATT +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLVLFSI*PSFVFI
Trigger: AATGAATACAAAGCTGGGGCAGATGGAGAATAAGAC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGAGTAAAACACGCATTTGGTaGTGGGTCTTATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: IATEYMVTSKIQSLPLQSKTRIW*WVLFSI
Trigger: GATGGAGAATAAGACCCAGCACCAAATGCGTGTTTT...ACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR GCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACTTCTCTGTGTCTGAGTaGTGTTGCAGGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYFSVSE*CCRRFR
Trigger: CCTGAACCGCCTGCAACAGCACTCAGACACAGAGAA...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGAACTGAAGTTTCTGTaGATACATGGGATATTGAGG +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQELKFL*IHGILR
Trigger: CCTCAATATCCCATGTATGCACAGAAACTTCAGTTC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACACTCCCAGCAAATCTaGAGTGATTTACGTTACAAT +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQHSQQI*SDLRYN
Trigger: ATTGTAACGTAAATCACTGCAGATTTGCTGGGAGTG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR CCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGAAGATGGCCCTTATTaGCAGCAAGATGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYEDGPY*QQDAGE
Trigger: CTCCCCTGCATCTTGCTGCCAATAAGGGCCATCTTC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTGGACCACAGGAAGATaGCCCTTATTGGCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWWTTGR*PLLAAR
Trigger: TCTTGCTGCCAATAAGGGCCATCTTCCTGTGGTCCA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGACCACAGGAAGATaGCCCTTATTGGCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNWTTGR*PLLAAR
Trigger: TCTTGCTGCCAATAAGGGCCATCTTCCTGTGGTCCA...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGCTGTGTCTCCAGCCTaGTTCTTTTCATGGACAGAA +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSAVSPA*FFSWTE
Trigger: TTCTGTCCATGAAAAGAACCAGGCTGGAGACACAGC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGTCTCCAGCGGAGTCTaGCCTGCATTGTTAACAATG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWVSSGV*PALLTM
Trigger: CATTGTTAACAATGCAGGCCAGACTCCGCTGGAGAC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCTGAAGCGCAAGACCTaGGGAGCTTTAGTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWLKRKT*GALVRR
Trigger: TCTCCTTACTAAAGCTCCCCAGGTCTTGCGCTTCAG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGTCGACAACCATTTATTaGTGCCTGCATCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQSTTIY*CLHHFP
Trigger: GGGAAAGTGATGCAGGCACCAATAAATGGTTGTCGA...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTACACGCATTTGGTGCTaGGTCTTATTCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSTRIWC*VLFSIC
Trigger: GCAGATGGAGAATAAGACCCAGCACCAAATGCGTGT...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGTCCAAAACACGCATTTaGTGCTGGGTCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQSKTRI*CWVLFS
Trigger: GGAGAATAAGACCCAGCACCAAATGCGTGTTTTGGA...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGGACTCACAAGTAGATaGTGTGGATTTAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNGLTSR*CGFSSA
Trigger: TGCAGAGCTAAATCCACACCATCTACTTGTGAGTCC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGCAGTCACCACTAATTaGTCCACACCTGTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWAVTTN*STPVED
Trigger: GTCCTCTACAGGTGTGGACCAATTAGTGGTGACTGC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGGTAGCAAGGCTGTCTaGACCTTGACGTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWGSKAV*TLTFLS
Trigger: ACTGAGAAACGTCAAGGTCCAGACAGCCTTGCTACC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCCTGCTGATCAGATCTaGCTGCCTCATTCATGGGTA +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWPADQI*LPHSWV
Trigger: TACCCATGAATGAGGCAGCCAGATCTGATCAGCAGG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTACCACTTTTCCATCTaGGTAGAAACAGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLYHFSI*VETASK
Trigger: TTTTGAGGCTGTTTCTACCCAGATGGAAAAGTGGTA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCATGCAGTTGCAAAACTaGAAATCTTCAAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSMQLQN*KSSRIL
Trigger: AAGGATTCTTGAAGATTTCCAGTTTTGCAACTGCAT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGCAGTCACCACTAATTaGTCCACACAAGTAGATGGT +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNAVTTN*STQVDG
Trigger: ACCATCTACTTGTGTGGACCAATTAGTGGTGACTGC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447838.6
ENST00000520793.5
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCAGAAGATGTCTTTATaGATATGCCATCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNQKMSL*ICHLRD
Trigger: GTCCCGAAGATGGCATATTCATAAAGACATCTTCTG...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR TCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCCCTTGTTGATGAGCTaGACCACATTCTCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNPLLMS*TTFSVW
Trigger: CCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCCCTTGTTGATGAGCTaGACCACATTCTCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWPLLMS*TTFSVW
Trigger: CCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCAGTGGGGCCTAAGTTaGGTTATCGAATATTTTGCC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSQWGLS*VIEYFA
Trigger: GGCAAAATATTCGATAACTCAACTTAGGCCCCACTG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATAGGAACATTTCTGAATaGCGCTCAGATGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNRNISE*RSDDRE
Trigger: TTCTCTGTCATCTGAGCGTCATTCAGAAATGTTCCT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGAAACCATGCCAGGATaGTTCATGCAAGGCTGTATT +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSETMPG*FMQGCI
Trigger: AATACAGCCTTGCATGAAGCATCCTGGCATGGTTTC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGAAACCATGCCAGGATaGTTCATGCAAGGCTGTATT +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSETMPG*FMQGCI
Trigger: AATACAGCCTTGCATGAAGCATCCTGGCATGGTTTC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
CDS-3UTR GCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGCAAACAGGTGTCTCCTaGATTATTTTTGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQQTGVS*IIFEVS
Trigger: GCTGACCTCAAAAATAATGCAGGAGACACCTGTTTG...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCCATTTATTGGTGCCTaGATCACTTTCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSPFIGA*ITFPSL
Trigger: CAAGGATGGGAAAGTGATGCAGGCACCAATAAATGG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAACCGATCCCAGCTCTaGTTTTATCTCCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWNRSQL*FYLLHS
Trigger: ACTGTGGAGGAGATAAAAGCAGAGCTGGGATCGGTT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATATTGGCTTGGCTTCGTaGTTCTTCAATCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNIGLAS*FFNLPF
Trigger: GAAAGGAAGATTGAAGAAGCACGAAGCCAAGCCAAT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAAGTTATCGAATATTTTaGCTTCACCGCAAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQSYRIF*LHRKAV
Trigger: TACTGCTTTGCGGTGAAGGCAAAATATTCGATAACT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACTTCCAGTAAGATTTTaGCCACCTTCTTGTGATTTA +
Preference number: 4 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQLPVRF*PPSCDL
Trigger: TAAATCACAAGAAGGTGGCCAAAATCTTACTGGAAG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCTTCCAGTAAGATTTTaGCCACCTTCTTGTGATTTA +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLLPVRF*PPSCDL
Trigger: TAAATCACAAGAAGGTGGCCAAAATCTTACTGGAAG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAAATGCTGACACCTTaGGCCTTGACTTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWKMLTP*ALTFSS
Trigger: GGAGGAGAAAGTCAAGGCCCAAGGTGTCAGCATTTT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACAAAATGCTGACACCTTaGGCCTTGACTTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNKMLTP*ALTFSS
Trigger: GGAGGAGAAAGTCAAGGCCCAAGGTGTCAGCATTTT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTTCGACAACCATTTATTaGTGCCTGCATCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSSTTIY*CLHHFP
Trigger: GGGAAAGTGATGCAGGCACCAATAAATGGTTGTCGA...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGGACTCACAAGTAGATaGTGTGGATTTAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSGLTSR*CGFSSA
Trigger: TGCAGAGCTAAATCCACACCATCTACTTGTGAGTCC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGGTAGCAAGGCTGTCTaGACCTTGACGTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYGSKAV*TLTFLS
Trigger: ACTGAGAAACGTCAAGGTCCAGACAGCCTTGCTACC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGCTGGGCTTTCTGATTaGCTTGGCTTCGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYAGLSD*LGFVLL
Trigger: AAGAAGCACGAAGCCAAGCCAATCAGAAAGCCCAGC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAACTTCAGATTAACCTaGACTGAGGCTAAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLNFRLT*TEAKSL
Trigger: TAAACTCTTAGCCTCAGTCCAGGTTAATCTGAAGTT...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCATCGTCCAGTTTCTTaGCATGGCTTGCTTAATCTG +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSHRPVS*HGLLNL
Trigger: CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGTTTCTGTGCATACATaGGATATTGAGGAGATGAAT +
Preference number: 4 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLVSVHT*DIEEMN
Trigger: ATTCATCTCCTCAATATCCCATGTATGCACAGAAAC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGTCCACACAAGTAGATaGTGTGGATTTAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSVHTSR*CGFSSA
Trigger: TGCAGAGCTAAATCCACACCATCTACTTGTGTGGAC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGCAGTCACCACTAATTaGTCCACACAAGTAGATGGT +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSAVTTN*STQVDG
Trigger: ACCATCTACTTGTGTGGACCAATTAGTGGTGACTGC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CCA 90 bp TATTATTACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCGAGTACAAGAGCTGCTaGTCGTGTTCCTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: YYYIATEYMVTSKIQSLPEYKSC*SCSFWT
Trigger: TGTCCAAAAGGAACACGACCAGCAGCTCTTGTACTC...GGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTAATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGATTCTCCAGCTTGTTaGTTAGAGGTTCACATCGAC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWDSPAC*LEVHID
Trigger: GTCGATGTGAACCTCTAATCAACAAGCTGGAGAATC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGATTCTCCAGCTTGTTaGTTAGAGGTTCACATCGAC +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNDSPAC*LEVHID
Trigger: GTCGATGTGAACCTCTAATCAACAAGCTGGAGAATC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACACAGTAGCCTCCAACTaGTTCTCCAGCTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNTVASN*FSSLLI
Trigger: AATCAACAAGCTGGAGAATCAGTTGGAGGCTACTGT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGACAGTAGCCTCCAACTaGTTCTCCAGCTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWTVASN*FSSLLI
Trigger: AATCAACAAGCTGGAGAATCAGTTGGAGGCTACTGT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGTATTCATTTTGTCCTaGACCGATCCCAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYVFILS*TDPSSA
Trigger: AGCAGAGCTGGGATCGGTTCAGGACAAAATGAATAC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTTCTGCTCCAGATTCTaGATCTTTAACATGCACCAG +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSFCSRF*IFNMHQ
Trigger: CTGGTGCATGTTAAAGATTCAGAATCTGGAGCAGAA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACTACCTGCGTAGTAGTTaGGAACAAGACAAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYYLRSS*EQDKLP
Trigger: TGGGAGCTTGTCTTGTTCTCAACTACTACGCAGGTA...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCAAACAGGTGTCTCCTaGATTATTTTTGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSQTGVS*IIFEVS
Trigger: GCTGACCTCAAAAATAATGCAGGAGACACCTGTTTG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCAAACAGGTGTCTCCTaGATTATTTTTGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RVYLAHLRVTALTERHLSQTGVS*IIFEVS
Trigger: GCTGACCTCAAAAATAATGCAGGAGACACCTGTTTG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR GCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCCATTTATTGGTGCCTaGATCACTTTCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNPFIGA*ITFPSL
Trigger: CAAGGATGGGAAAGTGATGCAGGCACCAATAAATGG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTACAACCATTTATTGGTaGCTGCATCACTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSTTIYW*LHHFPI
Trigger: GATGGGAAAGTGATGCAGGCACCAATAAATGGTTGT...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTCGACAACCATTTATTaGTGCCTGCATCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNSTTIY*CLHHFP
Trigger: GGGAAAGTGATGCAGGCACCAATAAATGGTTGTCGA...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GTGCTTTATTATTACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCACACGCATTTGGTGCTaGGTCTTATTCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: VLYYYIATEYMVTSKIQSTRIWC*VLFSIC
Trigger: GCAGATGGAGAATAAGACCCAGCACCAAATGCGTGT...GGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTAATAATAAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCATCGTCCAGTTTCTTaGCATGGCTTGCTTAATCTG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWHRPVS*HGLLNL
Trigger: CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCATCGTCCAGTTTCTTaGCATGGCTTGCTTAATCTG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNHRPVS*HGLLNL
Trigger: CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGTCCACACAAGTAGATaGTGTGGATTTAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNVHTSR*CGFSSA
Trigger: TGCAGAGCTAAATCCACACCATCTACTTGTGTGGAC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447838.6
ENST00000520793.5
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCAGAAGATGTCTTTATaGATATGCCATCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWQKMSL*ICHLRD
Trigger: GTCCCGAAGATGGCATATTCATAAAGACATCTTCTG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTTCTGCTCCAGATTCTaGATCTTTAACATGCACCAG +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWFCSRF*IFNMHQ
Trigger: CTGGTGCATGTTAAAGATTCAGAATCTGGAGCAGAA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR TCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGGCATACATGGGATATTaGGGAGATGAATATAAATCC +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQAYMGY*GDEYKS
Trigger: GGATTTATATTCATCTCCTCAATATCCCATGTATGC...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCCAGCAAATCTGCAGTaGTTTACGTTACAATGTTCG +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNPANLQ*FTLQCS
Trigger: CGAACATTGTAACGTAAATCACTGCAGATTTGCTGG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCAAACAGGTGTCTCCTaGATTATTTTTGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWQTGVS*IIFEVS
Trigger: GCTGACCTCAAAAATAATGCAGGAGACACCTGTTTG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGACAACCATTTATTGGTaGCTGCATCACTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWTTIYW*LHHFPI
Trigger: GATGGGAAAGTGATGCAGGCACCAATAAATGGTTGT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAAACACGCATTTGGTaGTGGGTCTTATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWKTRIW*WVLFSI
Trigger: GATGGAGAATAAGACCCAGCACCAAATGCGTGTTTT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACATTGGCTTGGCTTCGTaGTTCTTCAATCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNIGLAS*FFNLPF
Trigger: GAAAGGAAGATTGAAGAAGCACGAAGCCAAGCCAAT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGATTGGCTTGGCTTCGTaGTTCTTCAATCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWIGLAS*FFNLPF
Trigger: GAAAGGAAGATTGAAGAAGCACGAAGCCAAGCCAAT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGAACTGAAGTTTCTGTaGATACATGGGATATTGAGG +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSELKFL*IHGILR
Trigger: CCTCAATATCCCATGTATGCACAGAAACTTCAGTTC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTACCACTTTTCCATCTaGGTAGAAACAGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSYHFSI*VETASK
Trigger: TTTTGAGGCTGTTTCTACCCAGATGGAAAAGTGGTA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGGTTTCTGTGCATACATaGGATATTGAGGAGATGAAT +
Preference number: 4 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQVSVHT*DIEEMN
Trigger: ATTCATCTCCTCAATATCCCATGTATGCACAGAAAC...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR TCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCATCTTGCTGGCTCATaGATTAGGAAAGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWHLAGS*IRKERF
Trigger: AAACCTTTCTTTCCTAATTCATGAGCCAGCAAGATG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR GCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGTCTTATTCTCCATCTaGCCCAGCTTTGTATTCATT +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNVLFSI*PSFVFI
Trigger: AATGAATACAAAGCTGGGGCAGATGGAGAATAAGAC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR GCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACAAAACACGCATTTGGTaGTGGGTCTTATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYKTRIW*WVLFSI
Trigger: GATGGAGAATAAGACCCAGCACCAAATGCGTGTTTT...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACATTGGCTTGGCTTCGTaGTTCTTCAATCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYIGLAS*FFNLPF
Trigger: GAAAGGAAGATTGAAGAAGCACGAAGCCAAGCCAAT...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR GCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCAGAGAAACGAAGTTTaGATAATTTCAGCAGTAATG +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNQRNEV*IISAVM
Trigger: CATTACTGCTGAAATTATGCAAACTTCGTTTCTCTG...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCTTCCAGTAAGATTTTaGCCACCTTCTTGTGATTTA +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSLPVRF*PPSCDL
Trigger: TAAATCACAAGAAGGTGGCCAAAATCTTACTGGAAG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTACCACTTTTCCATCTaGGTAGAAACAGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWYHFSI*VETASK
Trigger: TTTTGAGGCTGTTTCTACCCAGATGGAAAAGTGGTA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTACCACTTTTCCATCTaGGTAGAAACAGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNYHFSI*VETASK
Trigger: TTTTGAGGCTGTTTCTACCCAGATGGAAAAGTGGTA...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATATGCAGTTGCAAAACTaGAAATCTTCAAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNMQLQN*KSSRIL
Trigger: AAGGATTCTTGAAGATTTCCAGTTTTGCAACTGCAT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCTTCCAGTAAGATTTTaGCCACCTTCTTGTGATTTA +
Preference number: 4 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWLPVRF*PPSCDL
Trigger: TAAATCACAAGAAGGTGGCCAAAATCTTACTGGAAG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTATGCAGTTGCAAAACTaGAAATCTTCAAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSMQLQN*KSSRIL
Trigger: AAGGATTCTTGAAGATTTCCAGTTTTGCAACTGCAT...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CCA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACAACTTCAGATTAACCTaGACTGAGGCTAAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNNFRLT*TEAKSL
Trigger: TAAACTCTTAGCCTCAGTCCAGGTTAATCTGAAGTT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
3UTR CAA 72 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTaGCAAAACTGGAAATCTTCAAGAATCCTTTCATAT +
Preference number: 4 (lower is better)
Translates to: TIVDSLGIAIMQ*QNWKSSRILSY
Trigger: ATATGAAAGGATTCTTGAAGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS GCA 90 bp GGCCAGTCTGCTCGCTGCCTGTGGCTGGTGGCGGCTGCCCACAGGTaGTGCTGGCTGCGGGTTGCTGGGCACGATGCCTTGTTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: GQSARCLWLVAAAHR*CWLRVAGHDALLAH
Trigger: GTGGGCCAACAAGGCATCGTGCCCAGCAACCCGCAGCCAGCAGCACCTGTGGGCAGCCGCCACCAGCCACAGGCAGCGAGCAGACTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CCA 90 bp TCAGCGCGGGACCCGGCCAGCAGGAGGACGCGCGTGCTCTGGGAGTaGCTGTTCTGGCAGGCCAGGTGCAGAGCTGTGTTCCCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: SARDPASRRTRVLWE*LFWQARCRAVFPAL
Trigger: CAAGGCGGGGAACACAGCTCTGCACCTGGCCTGCCAGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGCTGGCCGGGTCCCGCGCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000518253.5
ENST00000520793.5
ENST00000520886.6
ENST00000522441.5
CDS CCA 90 bp TTGAGGTCAGCGCGGGACCCGGCCAGCAGGAGGACGCGCGTGCTCTaGGAGTGGCTGTTCTGGCAGGCCAGGTGCAGAGCTGTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: LRSARDPASRRTRVL*EWLFWQARCRAVFP
Trigger: GGGGAACACAGCTCTGCACCTGGCCTGCCAGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGCTGGCCGGGTCCCGCGCTGACCTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000518253.5
ENST00000520793.5
ENST00000520886.6
ENST00000522441.5
CDS CCA 90 bp TCTGCTCGCTGCCTGTGGCTGGTGGCGGCTGCCCACAGGTGCTGCTaGCTGCGGGTTGCTGGGCACGATGCCTTGTTGGCCCACTCTTCC +
Preference number: 5 (lower is better)
Translates to: SARCLWLVAAAHRCC*LRVAGHDALLAHSS
Trigger: GGAAGAGTGGGCCAACAAGGCATCGTGCCCAGCAACCCGCAGCCAGCAGCACCTGTGGGCAGCCGCCACCAGCCACAGGCAGCGAGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CCA 90 bp GACCCGGCCAGCAGGAGGACGCGCGTGCTCTGGGAGTGGCTGTTCTaGCAGGCCAGGTGCAGAGCTGTGTTCCCCGCCTTGTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: DPASRRTRVLWEWLF*QARCRAVFPALFLA
Trigger: TGCCAAGAACAAGGCGGGGAACACAGCTCTGCACCTGGCCTGCCAGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGCTGGCCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000518253.5
ENST00000520886.6
ENST00000522441.5
CDS CCA 90 bp GACCCGGCCAGCAGGAGGACGCGCGTGCTCTGGGAGTGGCTGTTCTaGCAGGCCAGGTGCAGAGCTGTGTTCCCCGCCTTGTCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: DPASRRTRVLWEWLF*QARCRAVFPALSCL
Trigger: CAGACAAGACAAGGCGGGGAACACAGCTCTGCACCTGGCCTGCCAGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGCTGGCCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520793.5
CDS CCA 90 bp GCTGTGTTCCCCGCCTTGTCTTGTCTGTCCAGGGCACACCCTTCGTaGATGAGCGCCGCGATGATCTCCGTGTTCCCCACCACTGTGGCC +
Preference number: 5 (lower is better)
Translates to: AVFPALSCLSRAHPS*MSAAMISVFPTTVA
Trigger: GGCCACAGTGGTGGGGAACACGGAGATCATCGCGGCGCTCATCCACGAAGGGTGTGCCCTGGACAGACAAGACAAGGCGGGGAACACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520793.5
CDS GCA 90 bp ATGAGCGCCGCGATGATCTCCGTGTTCCCCACCACTGTGGCCCGGTaGAAGGCGGTCTGGTCCCCCTGCAAAGTGACACAAAGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: MSAAMISVFPTTVAR*KAVWSPCKVTQRQE
Trigger: TTCCTGCCTTTGTGTCACTTTGCAGGGGGACCAGACCGCCTTGCACCGGGCCACAGTGGTGGGGAACACGGAGATCATCGCGGCGCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518253.5
CDS CCA 90 bp CTCACAAAGGCAAAGCCATGGCCCTCACAGAGCCAGGGCTTTGTGTaGGAAGGCGGGAGGGTCCACTGGGGAACAGCCTCAGGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LTKAKPWPSQSQGFV*EGGRVHWGTASGLS
Trigger: AGAGAGGCCTGAGGCTGTTCCCCAGTGGACCCTCCCGCCTTCCCACACAAAGCCCTGGCTCTGTGAGGGCCATGGCTTTGCCTTTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520458.5
CDS CCA 90 bp GAATATGCCATCTTCGGGACCTGGTTCAGAAAGGTGAACCCCACCTaGATGCGCCCCTCTGGGCAAGCCGACCCTAGCCCACTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: EYAIFGTWFRKVNPT*MRPSGQADPSPLAA
Trigger: GGCAGCAAGTGGGCTAGGGTCGGCTTGCCCAGAGGGGCGCATCCAGGTGGGGTTCACCTTTCTGAACCAGGTCCCGAAGATGGCATATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523798.5
CDS CCA 90 bp GCTGTATTCCCATCCTTGTCTTGTCTGTCCAGGGCACACCCTTCGTaGATGAGCGCCGCGATGATCTCCGTGTTCCCCACCACTGTGGCC +
Preference number: 5 (lower is better)
Translates to: AVFPSLSCLSRAHPS*MSAAMISVFPTTVA
Trigger: GGCCACAGTGGTGGGGAACACGGAGATCATCGCGGCGCTCATCCACGAAGGGTGTGCCCTGGACAGACAAGACAAGGATGGGAATACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000518253.5
ENST00000520886.6
ENST00000522441.5
ENST00000522705.5
CDS CCA 90 bp CCCTCACAGAGCCAGGGCTTTGTGTGGGAAGGCGGGAGGGTCCACTaGGGAACAGCCTCAGGCCTCTCTGACATTTACATGTCAATGGCC +
Preference number: 5 (lower is better)
Translates to: PSQSQGFVWEGGRVH*GTASGLSDIYMSMA
Trigger: GGCCATTGACATGTAAATGTCAGAGAGGCCTGAGGCTGTTCCCCAGTGGACCCTCCCGCCTTCCCACACAAAGCCCTGGCTCTGTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520458.5
CDS-3UTR CAA 90 bp CTTCAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGGAGTCCGGCCATGCTaGGTAACCGCTACCCTGGCG +
Preference number: 5 (lower is better)
Translates to: LQGWAFGLNSAIMALSCDGVRPC*VTATLA
Trigger: CGCCAGGGTAGCGGTTACCAAGCATGGCCGGACTCC...ATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp CACGAAGAGCTGGACTTGATGCCTTTGACTCCCGTCATCCTGGGCCCCCATGCATTCCCCGCCTTGTTCTaGGCAAGCACGTTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: HEELDLMPLTPVILGPHAFPALF*ASTLAP
Trigger: AGGAGCCAACGTGCTTGCCAAGAACAAGGCGGGGAA...TGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp CACGAAGAGCTGGACTTGATGCCTTTGACTCCCGTCATCCTGGGCCCCCATGCAGCTGTGTTCCCCGCCTaGTTCTTGGCAAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: HEELDLMPLTPVILGPHAAVFPA*FLASTL
Trigger: CAACGTGCTTGCCAAGAACAAGGCGGGGAACACAGC...TGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp CAACTTCCGGGTTATTGTGGTAGCGGGCAGTCTCCAGCGGAGTCTGGCCTGCTTGACACTGCCCTTGCTTaGGGCCACCTCATCTCTTGG +
Preference number: 5 (lower is better)
Translates to: QLPGYCGSGQSPAESGLLDTALA*GHLISW
Trigger: CCAAGAGATGAGGTGGCCCAAAGCAAGGGCAGTGTC...AAGCAGGCCAGACTCCGCTGGAGACTGCCCGCTACCACAATAACCCGGAAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR CAA 90 bp GCCACAGCCTGTTCACTGCTGGGGGTGTCTCCTGCTGAGACACTGCCCTTGCTTGGAGTCTGGCCTGCTTaGGGTAACATCCACTCGTCA +
Preference number: 5 (lower is better)
Translates to: ATACSLLGVSPAETLPLLGVWPA*GNIHSS
Trigger: TGACGAGTGGATGTTACCCAAAGCAGGCCAGACTCC...AAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCCAGCAGTGAACAGGCTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR CAA 90 bp TGTCTCCTGCTGAGACACTGCCCTTGCTTTGGGCCACCTCATCTCTTGGCACAGGCTGAGACACTGCCCTaGCTTTGGGCCACCTCATCT +
Preference number: 5 (lower is better)
Translates to: CLLLRHCPCFGPPHLLAQAETLP*LWATSS
Trigger: AGATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAGC...CTGTGCCAAGAGATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS GCA 90 bp CCATCTTCGGGACCTGCATCTTCCCTCCTTGGCCCAGGTGGGTACTaGACCTCTGTGTTGGAGGAGTCTTTGTGGTTCATGGAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: PSSGPASSLLGPGGY*TSVLEESLWFMESQ
Trigger: TTGGCTCTCCATGAACCACAAAGACTCCTCCAACACAGAGGTGCAGTACCCACCTGGGCCAAGGAGGGAAGATGCAGGTCCCGAAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS GCA 90 bp TCCTGTCGTTTCTCCCCCTCATGCTTCTCTGTGTCTGAGTGCTGTTaGAGGCGGTTCAGGCACTCCGTCCTCTCTGCAGAAAGTCGCTCA +
Preference number: 5 (lower is better)
Translates to: SCRFSPSCFSVSECC*RRFRHSVLSAESRS
Trigger: TGAGCGACTTTCTGCAGAGAGGACGGAGTGCCTGAACCGCCTGCAACAGCACTCAGACACAGAGAAGCATGAGGGGGAGAAACGACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479572.1
CDS-3UTR CAA 90 bp TGTTCACTGCTGGGGGTGTCTCCTGCTGAGACACTGCCCTTGCTTTGGGCCACCCTTTTTCATGCCAGGTaGTGTTCACTGCAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: CSLLGVSPAETLPLLWATLFHAR*CSLQSG
Trigger: GCCTGACTGCAGTGAACACAACCTGGCATGAAAAAG...GGTGGCCCAAAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCCAGCAGTGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS TCA 90 bp CGGCCATGCTTGGTAACCGCTACCCTGGCGCCCTTGTTGATGAGCTaGACCACATTCTCTGTTTGGCCTTTGTACGCAGCTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: RPCLVTATLAPLLMS*TTFSVWPLYAATRR
Trigger: CCTTCTCGTAGCTGCGTACAAAGGCCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGGCGCCAGGGTAGCGGTTACCAAGCATGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000520458.5
ENST00000520793.5
ENST00000522441.5
ENST00000522705.5
ENST00000523798.5
CDS TCA 90 bp TGGTCCCCCTTGGTAACCGCTACCCTGGCGCCCTTGTTGATGAGCTaGACCACATTCTCTGTTTGGCCTTTGTACGCAGCTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: WSPLVTATLAPLLMS*TTFSVWPLYAATRR
Trigger: CCTTCTCGTAGCTGCGTACAAAGGCCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGGCGCCAGGGTAGCGGTTACCAAGGGGGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522779.5
CDS GCA 90 bp ATCTGTCGTTTCTCCCCCTCATGCTTCTCTGTGTCTGAGTGCTGTTaGAGGCGGTTCAGGCACTCCGTCCTCTCTGCAGAAAGTCGCTCA +
Preference number: 5 (lower is better)
Translates to: ICRFSPSCFSVSECC*RRFRHSVLSAESRS
Trigger: TGAGCGACTTTCTGCAGAGAGGACGGAGTGCCTGAACCGCCTGCAACAGCACTCAGACACAGAGAAGCATGAGGGGGAGAAACGACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000492158.5
ENST00000518253.5
ENST00000520793.5
ENST00000521004.1
ENST00000522441.5
CDS-3UTR CAA 90 bp CGAAGAGCTGGACTTGATGCCTTTGACTCCCGTCATCCTGGGCCCCCATGCATGTTCTTGGCAAGCACGTaGGCTCCTGCTTTAATGAGC +
Preference number: 5 (lower is better)
Translates to: RRAGLDAFDSRHPGPPCMFLAST*APALMS
Trigger: GCTCATTAAAGCAGGAGCCAACGTGCTTGCCAAGAA...CATGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGCTGCTGGCTGCGGGTaGCTGGGCACGATGCCTTGT +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSAAGCG*LGTMPC
Trigger: ACAAGGCATCGTGCCCAGCAACCCGCAGCCAGCAGC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS TCA 90 bp CAGATCTGGCTGCCTCATTCATGGGTAGCAAGGCTGTCTGGACCTTaGCGTTTCTCAGTCGGGAGCCTGTACAGTCAGAAGACGACAGCT +
Preference number: 5 (lower is better)
Translates to: QIWLPHSWVARLSGP*RFSVGSLYSQKTTA
Trigger: AGCTGTCGTCTTCTGACTGTACAGGCTCCCGACTGAGAAACGTCAAGGTCCAGACAGCCTTGCTACCCATGAATGAGGCAGCCAGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS TCA 90 bp TCTCTCTTTTTCCTCAGGCTTCGCCCACGACTGAAGCGCAAGACCTaGAGGAGGCAAACGGCATTGTTACAACCACTGGTGTGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: SLFFLRLRPRLKRKT*RRQTALLQPLVCAA
Trigger: TGCTGCGCACACCAGTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCCTGAGGAAAAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415924.6
ENST00000479572.1
CDS TCA 90 bp ACACTGCCCTTGGTAACCGCTACCCTGGCGCCCTTGTTGATGAGCTaGACCACATTCTCTGTTTGGCCTTTGTACGCAGCTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: TLPLVTATLAPLLMS*TTFSVWPLYAATRR
Trigger: CCTTCTCGTAGCTGCGTACAAAGGCCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGGCGCCAGGGTAGCGGTTACCAAGGGCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518150.5
CDS CCA 90 bp CTGCATCTTCCCTCCTTGGCCCAGGTGGGTACTGCACCTCTGTGTTaGAGGAGTCTTTGTGGTTCATGGAGAGCCAAACATTCCCACAGA +
Preference number: 5 (lower is better)
Translates to: LHLPSLAQVGTAPLC*RSLCGSWRAKHSHR
Trigger: TCTGTGGGAATGTTTGGCTCTCCATGAACCACAAAGACTCCTCCAACACAGAGGTGCAGTACCCACCTGGGCCAAGGAGGGAAGATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS CCA 90 bp GAATATGCCATCTTCGGGACCTGCATCTTCCCTCCTTGGCCCAGGTaGGTACTGCACCTCTGTGTTGGAGGAGTCTTTGTGGTTCATGGA +
Preference number: 5 (lower is better)
Translates to: EYAIFGTCIFPPWPR*VLHLCVGGVFVVHG
Trigger: TCCATGAACCACAAAGACTCCTCCAACACAGAGGTGCAGTACCCACCTGGGCCAAGGAGGGAAGATGCAGGTCCCGAAGATGGCATATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS GCA 90 bp TACAAATTACCCAGCCTCAGGTATTCCTGTCGTTTCTCCCCCTCATaGTTCTCTGTGTCTGAGTGCTGTTGCAGGCGGTTCAGGCACTCC +
Preference number: 5 (lower is better)
Translates to: YKLPSLRYSCRFSPS*FSVSECCCRRFRHS
Trigger: GGAGTGCCTGAACCGCCTGCAACAGCACTCAGACACAGAGAAGCATGAGGGGGAGAAACGACAGGAATACCTGAGGCTGGGTAATTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479572.1
CDS CCA 90 bp CTGACACCTTGGGCCTTGACTTTCTCCTCCTGTCATCCTTTGCTCTaGGTTCTGGGGAGGCTGACAGGAACTCTTCTCTGGCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LTPWALTFSSCHPLL*VLGRLTGTLLWLLL
Trigger: AAGAAGAAGCCAGAGAAGAGTTCCTGTCAGCCTCCCCAGAACCCAGAGCAAAGGATGACAGGAGGAGAAAGTCAAGGCCCAAGGTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518150.5
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGGAGTCCGGCCATGCTaGGTAACCGCTACCCTGGCG +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLGVRPC*VTATLA
Trigger: CGCCAGGGTAGCGGTTACCAAGCATGGCCGGACTCC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTGGCTGAGTAGCTGGGCTGTATTCCCATCCTaGTCTTGTCTGTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: GPVLRCLKLELLPWLSSWAVFPS*SCLSRA
Trigger: TGCCCTGGACAGACAAGACAAGGATGGGAATACAGC...CCAGCTACTCAGCCAAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp CATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTCCTTGGCTGAGTAGCTCTCCTGCATTATTTTaGAGGTCAGCGCGGGACCCG +
Preference number: 5 (lower is better)
Translates to: HGPVLRCLKLELLPWLSSSPALF*RSARDP
Trigger: CGGGTCCCGCGCTGACCTCAAAAATAATGCAGGAGA...GCTACTCAGCCAAGGAAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGCTGCTGGCTGCGGGTaGCTGGGCACGATGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLAAGCG*LGTMPC
Trigger: ACAAGGCATCGTGCCCAGCAACCCGCAGCCAGCAGC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCCTGGACTTGATGCCTTaGACTCCCGTCATCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GLNSAIMALSCDVLNWNFLDLMP*TPVILG
Trigger: GCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAG...GAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp CAACTTCCGGGTTATTGTGGTAGCGGGCAGTCTCCAGCGGAGTCTGGCCTGCTTCTGCAGTCAGGCAGATaGTTAACAATGGTCGTATCT +
Preference number: 5 (lower is better)
Translates to: QLPGYCGSGQSPAESGLLLQSGR*LTMVVS
Trigger: AGATACGACCATTGTTAACAATCTGCCTGACTGCAG...AAGCAGGCCAGACTCCGCTGGAGACTGCCCGCTACCACAATAACCCGGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR CAA 90 bp CAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCGGAGTCTGGCCTGCATaGTTAACAATGGTCGTATCT +
Preference number: 5 (lower is better)
Translates to: QGWAFGLNSAIMALSCDVGVWPA*LTMVVS
Trigger: AGATACGACCATTGTTAACAATGCAGGCCAGACTCC...GACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTCCTCCTGTCATCCTTaGCTCTGGGTTCTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSSSCHP*LWVLGR
Trigger: CCTCCCCAGAACCCAGAGCAAAGGATGACAGGAGGA...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGCTGGGCACGATGCCTaGTTGGCCCACTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLAGHDA*LAHSSQ
Trigger: CTGGGAAGAGTGGGCCAACAAGGCATCGTGCCCAGC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCCACGAAGAGCTGGACTaGATGCCTTTGACTCCCGTC +
Preference number: 5 (lower is better)
Translates to: GLNSAIMALSCDVLNWNFHEELD*MPLTPV
Trigger: GACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCGTG...GAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS TCA 90 bp GTGCGCAGCATCTGTGTGAGAGAATTCTCCTTGGACCTGGGGCTCTaGCCTAATGGAATTTACAGCTTAGAGGGTGAGAGCAGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: VRSICVREFSLDLGL*PNGIYSLEGESRCS
Trigger: TGAACACCTGCTCTCACCCTCTAAGCTGTAAATTCCATTAGGTCAGAGCCCCAGGTCCAAGGAGAATTCTCTCACACAGATGCTGCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415924.6
CDS GCA 90 bp AGAGCTGGACTTGATGCCTTTGACTCCCGTCATCCTGGGCCCCCATaGATGCCTATACCTCCACTGCCTGGTTACATTCCATATTTAAGT +
Preference number: 5 (lower is better)
Translates to: RAGLDAFDSRHPGPP*MPIPPLPGYIPYLS
Trigger: ACTTAAATATGGAATGTAACCAGGCAGTGGAGGTATAGGCATGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS GCA 90 bp CCATCCAGTGTTTCCCACAGCCCTAGCATACGTACTGCCTTTCAGTaGAGGAGAGTACAAGAGCTGCTGGTCGTGTTCCTTTTGGACAAA +
Preference number: 5 (lower is better)
Translates to: PSSVSHSPSIRTAFQ*RRVQELLVVFLLDK
Trigger: TTTGTCCAAAAGGAACACGACCAGCAGCTCTTGTACTCTCCTGCACTGAAAGGCAGTACGTATGCTAGGGCTGTGGGAAACACTGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CCA 90 bp CTTGGCCCAGGTGGGTACTGCACCTCTGTGTTGGAGGAGTCTTTGTaGTTCATGGAGAGCCAAACATTCCCACAGATCTGTTGTCTAGTT +
Preference number: 5 (lower is better)
Translates to: LGPGGYCTSVLEESL*FMESQTFPQICCLV
Trigger: AACTAGACAACAGATCTGTGGGAATGTTTGGCTCTCCATGAACCACAAAGACTCCTCCAACACAGAGGTGCAGTACCCACCTGGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS CCA 90 bp CCTTTCAGTGCAGGAGAGTACAAGAGCTGCTGGTCGTGTTCCTTTTaGACAAAAGGGCTCTCTGTGTGTGGGTTACCTGTAGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: PFSAGEYKSCWSCSF*TKGLSVCGLPVEDS
Trigger: TGAGTCCTCTACAGGTAACCCACACACAGAGAGCCCTTTTGTCCAAAAGGAACACGACCAGCAGCTCTTGTACTCTCCTGCACTGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS-3UTR CAA 90 bp TGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGCAGCGACCGCATCTaGCTGGCTCATGAATTAGGA +
Preference number: 5 (lower is better)
Translates to: WAFGLNSAIMALSCDVLNCSDRI*LAHELG
Trigger: TCCTAATTCATGAGCCAGCAAGATGCGGTCGCTGCA...GTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGGGAGTCCGGCCATGCTaGGTAACCGCTACCCTGGCG +
Preference number: 5 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQGVRPC*VTATLA
Trigger: CGCCAGGGTAGCGGTTACCAAGCATGGCCGGACTCC...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS TCA 90 bp AGGCAAACGGCATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTaGGAGAATTCTCCTTGGACCTGGGGCTCTGACCTAATGGAATTT +
Preference number: 5 (lower is better)
Translates to: RQTALLQPLVCAASV*ENSPWTWGSDLMEF
Trigger: AAATTCCATTAGGTCAGAGCCCCAGGTCCAAGGAGAATTCTCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATGCCGTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415924.6
CDS CCA 90 bp GGTAGACAAGTTCCTTCAGCTCAACACGAAGTCACTGGCCCGGCCTaGCACCCAGAGGTAAAGATGTTCACAATCATCAGAAGATGTCTT +
Preference number: 5 (lower is better)
Translates to: GRQVPSAQHEVTGPA*HPEVKMFTIIRRCL
Trigger: AAGACATCTTCTGATGATTGTGAACATCTTTACCTCTGGGTGCCAGGCCGGGCCAGTGACTTCGTGTTGAGCTGAAGGAACTTGTCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000520458.5
ENST00000522441.5
ENST00000522705.5
ENST00000522779.5
ENST00000523798.5
CDS CCA 90 bp AGGGCTCTCTGTGTGTGGGTTACCTGTAGAGGACTCACAAGTAGATaGTGTGGATTTAGCTCTGCAGGCCCTAGAATCTCCAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: RALCVWVTCRGLTSR*CGFSSAGPRISRKL
Trigger: AAGCTTTCTGGAGATTCTAGGGCCTGCAGAGCTAAATCCACACCATCTACTTGTGAGTCCTCTACAGGTAACCCACACACAGAGAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CCA 90 bp GAGCTGCTGGTCGTGTTCCTTTTGGACAAAAGGGCTCTCTGTGTGTaGGTTACCTGTAGAGGACTCACAAGTAGATGGTGTGGATTTAGC +
Preference number: 5 (lower is better)
Translates to: ELLVVFLLDKRALCV*VTCRGLTSRWCGFS
Trigger: GCTAAATCCACACCATCTACTTGTGAGTCCTCTACAGGTAACCCACACACAGAGAGCCCTTTTGTCCAAAAGGAACACGACCAGCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CCA 90 bp CTAGCATACGTACTGCCTTTCAGTGCAGGAGAGTACAAGAGCTGCTaGTCGTGTTCCTTTTGGACAAAAGGGCTCTCTGTGTGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: LAYVLPFSAGEYKSC*SCSFWTKGLSVCGL
Trigger: TAACCCACACACAGAGAGCCCTTTTGTCCAAAAGGAACACGACCAGCAGCTCTTGTACTCTCCTGCACTGAAAGGCAGTACGTATGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CCA 90 bp GCGGAGTCTGGCCTGCTTTGGGTAACATCCACTCGTCAGTTTAACTaGACATCCCTGAGTTCTTTTTCATGCCAGGTTGTGTTCACTGCA +
Preference number: 5 (lower is better)
Translates to: AESGLLWVTSTRQFN*TSLSSFSCQVVFTA
Trigger: TGCAGTGAACACAACCTGGCATGAAAAAGAACTCAGGGATGTCCAGTTAAACTGACGAGTGGATGTTACCCAAAGCAGGCCAGACTCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR CAA 90 bp TGTCCCACTTCTTCAGGGATGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTAACCACATTCTCTGTTaGGCCTTTGTACGCAGCTAC +
Preference number: 5 (lower is better)
Translates to: CPTSSGMGIWPKLCNHGPNHILC*AFVRSY
Trigger: GTAGCTGCGTACAAAGGCCAAACAGAGAATGTGGTT...AGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCATCCCTGAAGAAGTGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGGAGTCCGGCCATGCTaGGTAACCGCTACCCTGGCG +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSGVRPC*VTATLA
Trigger: CGCCAGGGTAGCGGTTACCAAGCATGGCCGGACTCC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp CCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTATTCCCATCCTTGTCTaGTCTGTCCAGGGCACACCC +
Preference number: 5 (lower is better)
Translates to: PKLCNHGPVLRCLKLELLIPILV*SVQGTP
Trigger: GGGTGTGCCCTGGACAGACAAGACAAGGATGGGAAT...AAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGCTGTATTCCCATCCTaGTCTTGTCTGTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSAVFPS*SCLSRA
Trigger: TGCCCTGGACAGACAAGACAAGGATGGGAATACAGC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp GCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGGCTTTAATGAGCAGCTaGGCTGACTGGCTGAAACCA +
Preference number: 5 (lower is better)
Translates to: AFGLNSAIMALSCDVLNWALMSS*ADWLKP
Trigger: TGGTTTCAGCCAGTCAGCCAAGCTGCTCATTAAAGC...CCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTTCCCCGCCTTGTTCTaGGCAAGCACGTTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLFPALF*ASTLAP
Trigger: AGGAGCCAACGTGCTTGCCAAGAACAAGGCGGGGAA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGCTGTGTTCCCCGCCTaGTTCTTGGCAAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQAVFPA*FLASTL
Trigger: CAACGTGCTTGCCAAGAACAAGGCGGGGAACACAGC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGACACTGCCCTTGCTTaGGGCCACCTCATCTCTTGG +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQDTALA*GHLISW
Trigger: CCAAGAGATGAGGTGGCCCAAAGCAAGGGCAGTGTC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGACACTGCCCTTGCTTaGGGCCACCTCATCTCTTGG +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLDTALA*GHLISW
Trigger: CCAAGAGATGAGGTGGCCCAAAGCAAGGGCAGTGTC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATCCTCCTGTCATCCTTaGCTCTGGGTTCTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQSSCHP*LWVLGR
Trigger: CCTCCCCAGAACCCAGAGCAAAGGATGACAGGAGGA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCCTGACACCTTGGGCCTaGACTTTCTCCTCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSLTPWA*TFSSCH
Trigger: ATGACAGGAGGAGAAAGTCAAGGCCCAAGGTGTCAG...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATTGAGGGCCTTCTCTTaGGGCCTAACCACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQLRAFS*GLTTGG
Trigger: CCCTCCAGTGGTTAGGCCCAAAGAGAAGGCCCTCAA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTTGAGGGCCTTCTCTTaGGGCCTAACCACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLLRAFS*GLTTGG
Trigger: CCCTCCAGTGGTTAGGCCCAAAGAGAAGGCCCTCAA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTGGGTAGCAGTGGAGTaGAGGGCCTTCTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLWVAVE*RAFSLG
Trigger: GCCCAAAGAGAAGGCCCTCAACTCCACTGCTACCCA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGCTGGGCACGATGCCTaGTTGGCCCACTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNAGHDA*LAHSSQ
Trigger: CTGGGAAGAGTGGGCCAACAAGGCATCGTGCCCAGC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGCTGCTGGCTGCGGGTaGCTGGGCACGATGCCTTGT +
Preference number: 5 (lower is better)
Translates to: RVYLAHLRVTALTERHLSAAGCG*LGTMPC
Trigger: ACAAGGCATCGTGCCCAGCAACCCGCAGCCAGCAGC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CAA 90 bp TGGGCATTTGGCCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACAGAGGCTTCAGTAGATaGCAACCAGGAGTCCCAACA +
Preference number: 5 (lower is better)
Translates to: WAFGLNSAIMALSCDVLNRGFSR*QPGVPT
Trigger: TGTTGGGACTCCTGGTTGCAATCTACTGAAGCCTCT...GTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGGCCAAATGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS TCA 90 bp GAGATCATTAGCTTCCTAGGGCTGTCACTCCCAGCAAATCTGCAGTaGTTTACGTTACAATGTTCGCTGCCTTTTCCCGTTAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: EIISFLGLSLPANLQ*FTLQCSLPFPVSLL
Trigger: GAGGAGGCTAACGGGAAAAGGCAGCGAACATTGTAACGTAAATCACTGCAGATTTGCTGGGAGTGACAGCCCTAGGAAGCTAATGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522441.5
ENST00000522779.5
CDS GCA 90 bp TGTCACTCCCAGCAAATCTGCAGTGATTTACGTTACAATGTTCGCTaGCTTTTCCCGTTAGCCTCCTCTGCTGATGCTGGCCAAATCACA +
Preference number: 5 (lower is better)
Translates to: CHSQQICSDLRYNVR*LFPLASSADAGQIT
Trigger: TGTGATTTGGCCAGCATCAGCAGAGGAGGCTAACGGGAAAAGGCAGCGAACATTGTAACGTAAATCACTGCAGATTTGCTGGGAGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522441.5
ENST00000522779.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGGAGTCCGGCCATGCTaGGTAACCGCTACCCTGGCG +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWGVRPC*VTATLA
Trigger: CGCCAGGGTAGCGGTTACCAAGCATGGCCGGACTCC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGATTCCCATCCTTGTCTaGTCTGTCCAGGGCACACCC +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLIPILV*SVQGTP
Trigger: GGGTGTGCCCTGGACAGACAAGACAAGGATGGGAAT...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGCTTTAATGAGCAGCTaGGCTGACTGGCTGAAACCA +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSALMSS*ADWLKP
Trigger: TGGTTTCAGCCAGTCAGCCAAGCTGCTCATTAAAGC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTCTTGGCAAGCACGTaGGCTCCTGCTTTAATGAGC +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSFLAST*APALMS
Trigger: GCTCATTAAAGCAGGAGCCAACGTGCTTGCCAAGAA...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGGGCACGATGCCTTGTaGGCCCACTCTTCCCAGACT +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNGHDAL*AHSSQT
Trigger: AGTCTGGGAAGAGTGGGCCAACAAGGCATCGTGCCC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGCTGGGCACGATGCCTaGTTGGCCCACTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSAGHDA*LAHSSQ
Trigger: CTGGGAAGAGTGGGCCAACAAGGCATCGTGCCCAGC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGCTGCTGGCTGCGGGTaGCTGGGCACGATGCCTTGT +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWAAGCG*LGTMPC
Trigger: ACAAGGCATCGTGCCCAGCAACCCGCAGCCAGCAGC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGCAATGTTTTGTGGCTaGCTAGTCTGCTCGTCACAG +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSAMFCG*LVCSSQ
Trigger: CTGTGACGAGCAGACTAGCAAGCCACAAAACATTGC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATGCAGCGACCGCATCTaGCTGGCTCATGAATTAGGA +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQCSDRI*LAHELG
Trigger: TCCTAATTCATGAGCCAGCAAGATGCGGTCGCTGCA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp CCTAAACTCTGCAATCATGGCCCTGTCCTGCGATGTCTTAAACTGGAACTTCTTTTCTCTGTTTGGCCTTaGTACGCAGCTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: PKLCNHGPVLRCLKLELLFSVWP*YAATRR
Trigger: CCTTCTCGTAGCTGCGTACAAAGGCCAAACAGAGAA...AAGAAGTTCCAGTTTAAGACATCGCAGGACAGGGCCATGATTGCAGAGTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCAACCACATTCTCTGTTaGGCCTTTGTACGCAGCTAC +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSNHILC*AFVRSY
Trigger: GTAGCTGCGTACAAAGGCCAAACAGAGAATGTGGTT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGTTCCCCGCCTTGTTCTaGGCAAGCACGTTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQFPALF*ASTLAP
Trigger: AGGAGCCAACGTGCTTGCCAAGAACAAGGCGGGGAA...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGCTGTGTTCCCCGCCTaGTTCTTGGCAAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNAVFPA*FLASTL
Trigger: CAACGTGCTTGCCAAGAACAAGGCGGGGAACACAGC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGACACTGCCCTTGCTTaGGGCCACCTCATCTCTTGG +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNDTALA*GHLISW
Trigger: CCAAGAGATGAGGTGGCCCAAAGCAAGGGCAGTGTC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTCCTCCTGTCATCCTTaGCTCTGGGTTCTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNSSCHP*LWVLGR
Trigger: CCTCCCCAGAACCCAGAGCAAAGGATGACAGGAGGA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACTGACACCTTGGGCCTaGACTTTCTCCTCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQLTPWA*TFSSCH
Trigger: ATGACAGGAGGAGAAAGTCAAGGCCCAAGGTGTCAG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCTGACACCTTGGGCCTaGACTTTCTCCTCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLLTPWA*TFSSCH
Trigger: ATGACAGGAGGAGAAAGTCAAGGCCCAAGGTGTCAG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGTCCAAAACACGCATTaGGTGCTGGGTCTTATTCTC +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSVQNTH*VLGLIL
Trigger: GAGAATAAGACCCAGCACCAAATGCGTGTTTTGGAC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGGGCACGATGCCTTGTaGGCCCACTCTTCCCAGACT +
Preference number: 5 (lower is better)
Translates to: RVYLAHLRVTALTERHLSGHDAL*AHSSQT
Trigger: AGTCTGGGAAGAGTGGGCCAACAAGGCATCGTGCCC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGGGCACGATGCCTTGTaGGCCCACTCTTCCCAGACT +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSGHDAL*AHSSQT
Trigger: AGTCTGGGAAGAGTGGGCCAACAAGGCATCGTGCCC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGCTGGGCACGATGCCTaGTTGGCCCACTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWAGHDA*LAHSSQ
Trigger: CTGGGAAGAGTGGGCCAACAAGGCATCGTGCCCAGC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGCTGGGCACGATGCCTaGTTGGCCCACTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNAGHDA*LAHSSQ
Trigger: CTGGGAAGAGTGGGCCAACAAGGCATCGTGCCCAGC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGCTGCTGGCTGCGGGTaGCTGGGCACGATGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYAAGCG*LGTMPC
Trigger: ACAAGGCATCGTGCCCAGCAACCCGCAGCCAGCAGC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCCAATGTAGCCTTATCTaGCTGGGCTTTCTGATTGGC +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSQCSLI*LGFLIG
Trigger: GCCAATCAGAAAGCCCAGCAAGATAAGGCTACATTG...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGAGTGCACTGGTCGTGTTCCTTTaGGACAAAAGGGCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: ATEYMVTSKIQSLPLQSALVVFL*DKRALC
Trigger: ACAGAGAGCCCTTTTGTCCAAAAGGAACACGACCAG...TGCACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS GCA 90 bp TCATTACCTGGCCTAGGTGTGGCTCTTCAAAGTCAAACTGAGATTTaGCTGAGACTGAAATGGGGCCCTTTGTTAAAGCGTTATGAGGCT +
Preference number: 5 (lower is better)
Translates to: SLPGLGVALQSQTEI*LRLKWGPLLKRYEA
Trigger: AGCCTCATAACGCTTTAACAAAGGGCCCCATTTCAGTCTCAGGCAAATCTCAGTTTGACTTTGAAGAGCCACACCTAGGCCAGGTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520839.1
CDS CCA 90 bp ACATCCGAGGGGCTGTCCTCTCTGTTCTACATCGTGTTCAGTTTCTaGATAACTGTGGTCAATTCTTTCCTGGAGAGATCATTAGCTTCC +
Preference number: 5 (lower is better)
Translates to: TSEGLSSLFYIVFSF*ITVVNSFLERSLAS
Trigger: GGAAGCTAATGATCTCTCCAGGAAAGAATTGACCACAGTTATCCAGAAACTGAACACGATGTAGAACAGAGAGGACAGCCCCTCGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485637.5
ENST00000522441.5
ENST00000522779.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTTCTCTGTTTGGCCTTaGTACGCAGCTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLFSVWP*YAATRR
Trigger: CCTTCTCGTAGCTGCGTACAAAGGCCAAACAGAGAA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAATTCTCTGTTTGGCCTTaGTACGCAGCTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQFSVWP*YAATRR
Trigger: CCTTCTCGTAGCTGCGTACAAAGGCCAAACAGAGAA...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATATTCCCATCCTTGTCTaGTCTGTCCAGGGCACACCC +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNIPILV*SVQGTP
Trigger: GGGTGTGCCCTGGACAGACAAGACAAGGATGGGAAT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGCTTTAATGAGCAGCTaGGCTGACTGGCTGAAACCA +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLALMSS*ADWLKP
Trigger: TGGTTTCAGCCAGTCAGCCAAGCTGCTCATTAAAGC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTTCCCCGCCTTGTTCTaGGCAAGCACGTTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSFPALF*ASTLAP
Trigger: AGGAGCCAACGTGCTTGCCAAGAACAAGGCGGGGAA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGTCTCCTGCATTATTTTaGAGGTCAGCGCGGGACCCG +
Preference number: 5 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQSPALF*RSARDP
Trigger: CGGGTCCCGCGCTGACCTCAAAAATAATGCAGGAGA...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTCTCCTGCATTATTTTaGAGGTCAGCGCGGGACCCG +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNSPALF*RSARDP
Trigger: CGGGTCCCGCGCTGACCTCAAAAATAATGCAGGAGA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGCTGAGACACTGCCCTaGCTTTGGGCCACCTCATCT +
Preference number: 5 (lower is better)
Translates to: RVYLAHLRVTALTERHLSAETLP*LWATSS
Trigger: AGATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAGC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGCTGAGACACTGCCCTaGCTTTGGGCCACCTCATCT +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSAETLP*LWATSS
Trigger: AGATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAGC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGAAAATGCTGACACCTaGGGCCTTGACTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQENADT*GLDFLL
Trigger: GAGGAGAAAGTCAAGGCCCAAGGTGTCAGCATTTTC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCCCATCTGCCCCAGCTTaGTATTCATTTTGTCCTGAA +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSPSAPA*YSFCPE
Trigger: TTCAGGACAAAATGAATACAAAGCTGGGGCAGATGG...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCGCTCAACCATCAGCTaGTCCAAAACACGCATTTGG +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLRSTIS*SKTRIW
Trigger: CCAAATGCGTGTTTTGGACAAGCTGATGGTTGAGCG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTTGAGGGCCTTCTCTTaGGGCCTAACCACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSLRAFS*GLTTGG
Trigger: CCCTCCAGTGGTTAGGCCCAAAGAGAAGGCCCTCAA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTGGGTAGCAGTGGAGTaGAGGGCCTTCTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSWVAVE*RAFSLG
Trigger: GCCCAAAGAGAAGGCCCTCAACTCCACTGCTACCCA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCCCAGACTTCTTAGTTaGAGTGCCTCTGTTGACGCA +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLPRLLS*SASVDA
Trigger: TGCGTCAACAGAGGCACTCAAACTAAGAAGTCTGGG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGGGCACGATGCCTTGTaGGCCCACTCTTCCCAGACT +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWGHDAL*AHSSQT
Trigger: AGTCTGGGAAGAGTGGGCCAACAAGGCATCGTGCCC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGAAGCTACTTGCGAGGTaGAGGCAGGAGGATCACGAG +
Preference number: 5 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQKLLAR*RQEDHE
Trigger: CTCGTGATCCTCCTGCCTCAACCTCGCAAGTAGCTT...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGCTGTGTTCCCCGCCTaGTCTTGTCTGTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNAVFPA*SCLSRA
Trigger: TGCCCTGGACAGACAAGACAAGGCGGGGAACACAGC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520793.5
CDS TCA 90 bp CAGCTTTTCATTACCTGGCCTAGGTGTGGCTCTTCAAAGTCAAACTaGGATTTGCCTGAGACTGAAATGGGGCCCTTTGTTAAAGCGTTA +
Preference number: 5 (lower is better)
Translates to: QLFITWPRCGSSKSN*DLPETEMGPFVKAL
Trigger: TAACGCTTTAACAAAGGGCCCCATTTCAGTCTCAGGCAAATCTCAGTTTGACTTTGAAGAGCCACACCTAGGCCAGGTAATGAAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520839.1
CDS CCA 90 bp CCTCTTACAGTGCAGAGTGACAGAATGGACACAGAAAAACATAGGTaGGTCAGAACAGATCTCAGTTTGAACCCAGTAGCTACTGGCTAT +
Preference number: 5 (lower is better)
Translates to: PLTVQSDRMDTEKHR*VRTDLSLNPVATGY
Trigger: ATAGCCAGTAGCTACTGGGTTCAAACTGAGATCTGTTCTGACCCACCTATGTTTTTCTGTGTCCATTCTGTCACTCTGCACTGTAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415924.6
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTATTCCCATCCTTGTCTaGTCTGTCCAGGGCACACCC +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSIPILV*SVQGTP
Trigger: GGGTGTGCCCTGGACAGACAAGACAAGGATGGGAAT...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGCTGTATTCCCATCCTaGTCTTGTCTGTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNAVFPS*SCLSRA
Trigger: TGCCCTGGACAGACAAGACAAGGATGGGAATACAGC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGGCTGTATTCCCATCCTaGTCTTGTCTGTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQAVFPS*SCLSRA
Trigger: TGCCCTGGACAGACAAGACAAGGATGGGAATACAGC...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTTCTCCTGCATTATTTTaGAGGTCAGCGCGGGACCCG +
Preference number: 5 (lower is better)
Translates to: RVYLAHLRVTALTERHLSSPALF*RSARDP
Trigger: CGGGTCCCGCGCTGACCTCAAAAATAATGCAGGAGA...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTCTCCTGCATTATTTTaGAGGTCAGCGCGGGACCCG +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSSPALF*RSARDP
Trigger: CGGGTCCCGCGCTGACCTCAAAAATAATGCAGGAGA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGGAGTCTGGCCTGCATaGTTAACAATGGTCGTATCT +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLGVWPA*LTMVVS
Trigger: AGATACGACCATTGTTAACAATGCAGGCCAGACTCC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGGAGTCTGGCCTGCATaGTTAACAATGGTCGTATCT +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQGVWPA*LTMVVS
Trigger: AGATACGACCATTGTTAACAATGCAGGCCAGACTCC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGACACTGCCCTTGCTTaGGGCCACCTCATCTCTTGG +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWDTALA*GHLISW
Trigger: CCAAGAGATGAGGTGGCCCAAAGCAAGGGCAGTGTC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGCGCTCAACCATCAGCTaGTCCAAAACACGCATTTGG +
Preference number: 5 (lower is better)
Translates to: YIATEYMVTSKIQSLPLQRSTIS*SKTRIW
Trigger: CCAAATGCGTGTTTTGGACAAGCTGATGGTTGAGCG...CTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTTGAGGGCCTTCTCTTaGGGCCTAACCACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNLRAFS*GLTTGG
Trigger: CCCTCCAGTGGTTAGGCCCAAAGAGAAGGCCCTCAA...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTGGGTAGCAGTGGAGTaGAGGGCCTTCTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWWVAVE*RAFSLG
Trigger: GCCCAAAGAGAAGGCCCTCAACTCCACTGCTACCCA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGTAGCAGTGGAGTaGAGGGCCTTCTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNWVAVE*RAFSLG
Trigger: GCCCAAAGAGAAGGCCCTCAACTCCACTGCTACCCA...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGGCTTTCTGATTGGCTaGGCTTCGTGCTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLGFLIG*ASCFFN
Trigger: ATTGAAGAAGCACGAAGCCAAGCCAATCAGAAAGCC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAGGCTTTCTGATTGGCTaGGCTTCGTGCTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQGFLIG*ASCFFN
Trigger: ATTGAAGAAGCACGAAGCCAAGCCAATCAGAAAGCC...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCAATGTAGCCTTATCTaGCTGGGCTTTCTGATTGGC +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLQCSLI*LGFLIG
Trigger: GCCAATCAGAAAGCCCAGCAAGATAAGGCTACATTG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACAATGTAGCCTTATCTaGCTGGGCTTTCTGATTGGC +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQQCSLI*LGFLIG
Trigger: GCCAATCAGAAAGCCCAGCAAGATAAGGCTACATTG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCACCCTAGTCCTTAGTTaGGCAAGTTCCTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSTLVLS*ASSSSK
Trigger: TTTAGAAGAGGAACTTGCCAAACTAAGGACTAGGGT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCACAATAGTTGACTCCTaGGGCATAGCTATTATGCAG +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSTIVDS*GIAIMQ
Trigger: CTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCGTTTCTTGGCATGGCTaGCTTAATCTGAGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: ESRLTHRPVSWHGLLNLSVSWHG*LNLSFQ
Trigger: TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAAC...GCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCTTACAGAAAGACACTaGTCTAGGCACAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLLTERH*SRHSRC
Trigger: ACACCTGCTGTGCCTAGACAAGTGTCTTTCTGTAAG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTAAGCTACTTGCGAGGTaGAGGCAGGAGGATCACGAG +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSKLLAR*RQEDHE
Trigger: CTCGTGATCCTCCTGCCTCAACCTCGCAAGTAGCTT...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGTCAGCTTGCAATGTTTaGTGGCTTGCTAGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLSACNV*WLASLL
Trigger: GAGCAGACTAGCAAGCCACAAAACATTGCAAGCTGA...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGTAACACTGCCCCGATaGAAGTCAGGGAACAATTCA +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLVTLPR*KSGNNS
Trigger: TGAATTGTTCCCTGACTTCAATCGGGGCAGTGTTAC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS GCA 90 bp CAATGTAGCCTTATCTTGCTGGGCTTTCTGATTGGCTTGGCTTCGTaGTTCTTCAATCTTCCTTTCATACCACTTTTCCATCTGGGTAGA +
Preference number: 5 (lower is better)
Translates to: QCSLILLGFLIGLAS*FFNLPFIPLFHLGR
Trigger: TCTACCCAGATGGAAAAGTGGTATGAAAGGAAGATTGAAGAAGCACGAAGCCAAGCCAATCAGAAAGCCCAGCAAGATAAGGCTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS GCA 90 bp ACATCCACTCGTCAGTTTAACTGGACATCCCTGAGTTCTTTTTCATaGCAGGTTGTGTTCACTGCAGTCAGGCAGATTGTTAACAATGGT +
Preference number: 5 (lower is better)
Translates to: TSTRQFNWTSLSSFS*QVVFTAVRQIVNNG
Trigger: ACCATTGTTAACAATCTGCCTGACTGCAGTGAACACAACCTGGCATGAAAAAGAACTCAGGGATGTCCAGTTAAACTGACGAGTGGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS-3UTR CAA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTTGCAGCGACCGCATCTaGCTGGCTCATGAATTAGGA +
Preference number: 5 (lower is better)
Translates to: RVYLAHLRVTALTERHLSCSDRI*LAHELG
Trigger: TCCTAATTCATGAGCCAGCAAGATGCGGTCGCTGCA...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATTTCTCTGTTTGGCCTTaGTACGCAGCTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNFSVWP*YAATRR
Trigger: CCTTCTCGTAGCTGCGTACAAAGGCCAAACAGAGAA...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGTTCTTGGCAAGCACGTaGGCTCCTGCTTTAATGAGC +
Preference number: 5 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQFLAST*APALMS
Trigger: GCTCATTAAAGCAGGAGCCAACGTGCTTGCCAAGAA...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACTTCCCCGCCTTGTTCTaGGCAAGCACGTTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYFPALF*ASTLAP
Trigger: AGGAGCCAACGTGCTTGCCAAGAACAAGGCGGGGAA...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACGCTGTGTTCCCCGCCTaGTTCTTGGCAAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYAVFPA*FLASTL
Trigger: CAACGTGCTTGCCAAGAACAAGGCGGGGAACACAGC...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCTGACACCTTGGGCCTaGACTTTCTCCTCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: RVYLAHLRVTALTERHLSLTPWA*TFSSCH
Trigger: ATGACAGGAGGAGAAAGTCAAGGCCCAAGGTGTCAG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGAAAATGCTGACACCTaGGGCCTTGACTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNENADT*GLDFLL
Trigger: GAGGAGAAAGTCAAGGCCCAAGGTGTCAGCATTTTC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAATCGACAACCATTTATaGGTGCCTGCATCACTTTCC +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQIDNHL*VPASLS
Trigger: GGAAAGTGATGCAGGCACCAATAAATGGTTGTCGAT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGATCGACAACCATTTATaGGTGCCTGCATCACTTTCC +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLIDNHL*VPASLS
Trigger: GGAAAGTGATGCAGGCACCAATAAATGGTTGTCGAT...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACCATCTGCCCCAGCTTaGTATTCATTTTGTCCTGAA +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQPSAPA*YSFCPE
Trigger: TTCAGGACAAAATGAATACAAAGCTGGGGCAGATGG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCCTACAGAGTGTCCAAAACACGCATTaGGTGCTGGGTCTTATTCTC +
Preference number: 5 (lower is better)
Translates to: IATEYMVTSKIQSLPLQSVQNTH*VLGLIL
Trigger: GAGAATAAGACCCAGCACCAAATGCGTGTTTTGGAC...ACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR CAA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGCGCTCAACCATCAGCTaGTCCAAAACACGCATTTGG +
Preference number: 5 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQRSTIS*SKTRIW
Trigger: CCAAATGCGTGTTTTGGACAAGCTGATGGTTGAGCG...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACTTGAGGGCCTTCTCTTaGGGCCTAACCACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYLRAFS*GLTTGG
Trigger: CCCTCCAGTGGTTAGGCCCAAAGAGAAGGCCCTCAA...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGCCCAGACTTCTTAGTTaGAGTGCCTCTGTTGACGCA +
Preference number: 5 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQPRLLS*SASVDA
Trigger: TGCGTCAACAGAGGCACTCAAACTAAGAAGTCTGGG...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCAGCTTCTGAAAGTCTaGTGTCTGCAGATTTTCACG +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLQLLKV*CLQIFT
Trigger: CGTGAAAATCTGCAGACACAAGACTTTCAGAAGCTG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS TCA 90 bp GCCTATACCTCCACTGCCTGGTTACATTCCATATTTAAGTTAGTTTaGAGAGGCTTCAGTAGATTGCAACCAGGAGTCCCAACAACTTTG +
Preference number: 5 (lower is better)
Translates to: AYTSTAWLHSIFKLV*RGFSRLQPGVPTTL
Trigger: CAAAGTTGTTGGGACTCCTGGTTGCAATCTACTGAAGCCTCTTCAAACTAACTTAAATATGGAATGTAACCAGGCAGTGGAGGTATAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGCAGCGACCGCATCTaGCTGGCTCATGAATTAGGA +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNCSDRI*LAHELG
Trigger: TCCTAATTCATGAGCCAGCAAGATGCGGTCGCTGCA...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATAACCACATTCTCTGTTaGGCCTTTGTACGCAGCTAC +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNNHILC*AFVRSY
Trigger: GTAGCTGCGTACAAAGGCCAAACAGAGAATGTGGTT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACTCTCCTGCATTATTTTaGAGGTCAGCGCGGGACCCG +
Preference number: 5 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYSPALF*RSARDP
Trigger: CGGGTCCCGCGCTGACCTCAAAAATAATGCAGGAGA...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGGAGTCTGGCCTGCATaGTTAACAATGGTCGTATCT +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNGVWPA*LTMVVS
Trigger: AGATACGACCATTGTTAACAATGCAGGCCAGACTCC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCTGACACCTTGGGCCTaGACTTTCTCCTCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNLTPWA*TFSSCH
Trigger: ATGACAGGAGGAGAAAGTCAAGGCCCAAGGTGTCAG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTCGCTCAACCATCAGCTaGTCCAAAACACGCATTTGG +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSRSTIS*SKTRIW
Trigger: CCAAATGCGTGTTTTGGACAAGCTGATGGTTGAGCG...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCGCTCAACCATCAGCTaGTCCAAAACACGCATTTGG +
Preference number: 5 (lower is better)
Translates to: RVYLAHLRVTALTERHLSRSTIS*SKTRIW
Trigger: CCAAATGCGTGTTTTGGACAAGCTGATGGTTGAGCG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAAACCCTAGTCCTTAGTTaGGCAAGTTCCTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQTLVLS*ASSSSK
Trigger: TTTAGAAGAGGAACTTGCCAAACTAAGGACTAGGGT...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGGTTTCTTGGCATGGCTaGCTTAATCTGAGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLVSWHG*LNLSFQ
Trigger: TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAAC...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACTGAAGCGCAAGACATaGTTAACAATGGTCGTATCT +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQLKRKT*LTMVVS
Trigger: AGATACGACCATTGTTAACAATGTCTTGCGCTTCAG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520793.5
CDS TCA 90 bp CTTTTAATGTGTTCCTTCAATGTAGCCTTATCTTGCTGGGCTTTCTaGTTGGCTTGGCTTCGTGCTTCTTCAATCTTCCTTTCATACCAC +
Preference number: 5 (lower is better)
Translates to: LLMCSFNVALSCWAF*LAWLRASSIFLSYH
Trigger: GTGGTATGAAAGGAAGATTGAAGAAGCACGAAGCCAAGCCAATCAGAAAGCCCAGCAAGATAAGGCTACATTGAAGGAACACATTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS GCA 90 bp TTTAACATGCACCAGGTTTTTAATTCATCCACCAAGGATATCAGATaGAGATGTTGGCAGCATGCTTCTTGTACAGCCTGCAGAACCATA +
Preference number: 5 (lower is better)
Translates to: FNMHQVFNSSTKDIR*RCWQHASCTACRTI
Trigger: TATGGTTCTGCAGGCTGTACAAGAAGCATGCTGCCAACATCTGCATCTGATATCCTTGGTGGATGAATTAAAAACCTGGTGCATGTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479572.1
ENST00000483473.1
CDS-3UTR CAA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACTGCAGCGACCGCATCTaGCTGGCTCATGAATTAGGA +
Preference number: 5 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYCSDRI*LAHELG
Trigger: TCCTAATTCATGAGCCAGCAAGATGCGGTCGCTGCA...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGTTCTCTGTTTGGCCTTaGTACGCAGCTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWFSVWP*YAATRR
Trigger: CCTTCTCGTAGCTGCGTACAAAGGCCAAACAGAGAA...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGCTTTAATGAGCAGCTaGGCTGACTGGCTGAAACCA +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWALMSS*ADWLKP
Trigger: TGGTTTCAGCCAGTCAGCCAAGCTGCTCATTAAAGC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTTCTTGGCAAGCACGTaGGCTCCTGCTTTAATGAGC +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNFLAST*APALMS
Trigger: GCTCATTAAAGCAGGAGCCAACGTGCTTGCCAAGAA...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGAAAATGCTGACACCTaGGGCCTTGACTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWENADT*GLDFLL
Trigger: GAGGAGAAAGTCAAGGCCCAAGGTGTCAGCATTTTC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATATCGACAACCATTTATaGGTGCCTGCATCACTTTCC +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNIDNHL*VPASLS
Trigger: GGAAAGTGATGCAGGCACCAATAAATGGTTGTCGAT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTGTCCAAAACACGCATTaGGTGCTGGGTCTTATTCTC +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSVQNTH*VLGLIL
Trigger: GAGAATAAGACCCAGCACCAAATGCGTGTTTTGGAC...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCCCAGACTTCTTAGTTaGAGTGCCTCTGTTGACGCA +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWPRLLS*SASVDA
Trigger: TGCGTCAACAGAGGCACTCAAACTAAGAAGTCTGGG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCCCAGACTTCTTAGTTaGAGTGCCTCTGTTGACGCA +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNPRLLS*SASVDA
Trigger: TGCGTCAACAGAGGCACTCAAACTAAGAAGTCTGGG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGGCTTTCTGATTGGCTaGGCTTCGTGCTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: RVYLAHLRVTALTERHLSGFLIG*ASCFFN
Trigger: ATTGAAGAAGCACGAAGCCAAGCCAATCAGAAAGCC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CAA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCAATGTAGCCTTATCTaGCTGGGCTTTCTGATTGGC +
Preference number: 5 (lower is better)
Translates to: RVYLAHLRVTALTERHLSQCSLI*LGFLIG
Trigger: GCCAATCAGAAAGCCCAGCAAGATAAGGCTACATTG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CAA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTCTTACAGAAAGACACTaGTCTAGGCACAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: RVYLAHLRVTALTERHLSLTERH*SRHSRC
Trigger: ACACCTGCTGTGCCTAGACAAGTGTCTTTCTGTAAG...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CAA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACTTCTCTGTTTGGCCTTaGTACGCAGCTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYFSVWP*YAATRR
Trigger: CCTTCTCGTAGCTGCGTACAAAGGCCAAACAGAGAA...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACAACCACATTCTCTGTTaGGCCTTTGTACGCAGCTAC +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNNHILC*AFVRSY
Trigger: GTAGCTGCGTACAAAGGCCAAACAGAGAATGTGGTT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGGAGTCTGGCCTGCATaGTTAACAATGGTCGTATCT +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWGVWPA*LTMVVS
Trigger: AGATACGACCATTGTTAACAATGCAGGCCAGACTCC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGTCCAAAACACGCATTaGGTGCTGGGTCTTATTCTC +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWVQNTH*VLGLIL
Trigger: GAGAATAAGACCCAGCACCAAATGCGTGTTTTGGAC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACGGCTTTCTGATTGGCTaGGCTTCGTGCTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNGFLIG*ASCFFN
Trigger: ATTGAAGAAGCACGAAGCCAAGCCAATCAGAAAGCC...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCAATGTAGCCTTATCTaGCTGGGCTTTCTGATTGGC +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNQCSLI*LGFLIG
Trigger: GCCAATCAGAAAGCCCAGCAAGATAAGGCTACATTG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATACCCTAGTCCTTAGTTaGGCAAGTTCCTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNTLVLS*ASSSSK
Trigger: TTTAGAAGAGGAACTTGCCAAACTAAGGACTAGGGT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCTTACAGAAAGACACTaGTCTAGGCACAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNLTERH*SRHSRC
Trigger: ACACCTGCTGTGCCTAGACAAGTGTCTTTCTGTAAG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATGAGTTATCGAATATTTaGCCTTCACCGCAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNELSNI*PSPQSS
Trigger: ACTGCTTTGCGGTGAAGGCAAAATATTCGATAACTC...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp AGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGAGCTTTCAACAAAGGACAAGAAGCTaGTCCAAAGTTTCAACATAT +
Preference number: 5 (lower is better)
Translates to: RLTHRPVSWHGLLNLSFQQRTRS*SKVSTY
Trigger: ATATGTTGAAACTTTGGACAAGCTTCTTGTCCTTTG...TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp TTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATCTGCAAAGGACAAGAAGCTaGTCCAAAGTTTCAACATAT +
Preference number: 5 (lower is better)
Translates to: LESRLTHRPVSWHGLLNLQRTRS*SKVSTY
Trigger: ATATGTTGAAACTTTGGACAAGCTTCTTGTCCTTTG...CAGATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp TATTATTACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTGCCCAGCAAAATACAGTCCTaGCCCCTACAGAGTGCACTT +
Preference number: 5 (lower is better)
Translates to: YYYIATEYMVTSKIQSLPSKIQS*PLQSAL
Trigger: AAGTGCACTCTGTAGGGGCAAGGACTGTATTTTGCT...GGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTAATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521004.1
CDS-3UTR CAA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACAACCACATTCTCTGTTaGGCCTTTGTACGCAGCTAC +
Preference number: 5 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYNHILC*AFVRSY
Trigger: GTAGCTGCGTACAAAGGCCAAACAGAGAATGTGGTT...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGATCGACAACCATTTATaGGTGCCTGCATCACTTTCC +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWIDNHL*VPASLS
Trigger: GGAAAGTGATGCAGGCACCAATAAATGGTTGTCGAT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACCCATCTGCCCCAGCTTaGTATTCATTTTGTCCTGAA +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNPSAPA*YSFCPE
Trigger: TTCAGGACAAAATGAATACAAAGCTGGGGCAGATGG...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTACAATAGTTGACTCCTaGGGCATAGCTATTATGCAG +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSTIVDS*GIAIMQ
Trigger: CTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTTCTCATTTGATCTCATaGTTTCCAGAGCTGTTAGCC +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSSHLIS*FPELLA
Trigger: GGCTAACAGCTCTGGAAACAATGAGATCAAATGAGA...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp AGGGTTTATTTAGCACATCTCAGAGTTACAGCTCTTACAGAAAGACACTTGTCTGAGTTATCGAATATTTaGCCTTCACCGCAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: RVYLAHLRVTALTERHLSELSNI*PSPQSS
Trigger: ACTGCTTTGCGGTGAAGGCAAAATATTCGATAACTC...AGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTGAGATGTGCTAAATAAACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp ATTTCATTATGGAACAAAGTAAAGTCTTCTGGCCTCCATGAAGTTGGGGAACAGCTTCATCACCTCTATTaGTTTCTTCTTCTACGACAG +
Preference number: 5 (lower is better)
Translates to: ISLWNKVKSSGLHEVGEQLHHLY*FLLLRQ
Trigger: CTGTCGTAGAAGAAGAAACAAATAGAGGTGATGAAG...CTGTTCCCCAACTTCATGGAGGCCAGAAGACTTTACTTTGTTCCATAATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACAGACATCCATTCAGCTaGCAATGTTTTGTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNRHPFS*QCFVAC
Trigger: GCAAGCCACAAAACATTGCAAGCTGAATGGATGTCT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACACCCTAGTCCTTAGTTaGGCAAGTTCCTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNTLVLS*ASSSSK
Trigger: TTTAGAAGAGGAACTTGCCAAACTAAGGACTAGGGT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGACAATAGTTGACTCCTaGGGCATAGCTATTATGCAG +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWTIVDS*GIAIMQ
Trigger: CTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp GCAATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACACAATAGTTGACTCCTaGGGCATAGCTATTATGCAG +
Preference number: 5 (lower is better)
Translates to: AIYTIVDSLGIAIMQLQNTIVDS*GIAIMQ
Trigger: CTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT...GTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGGTTTCTTGGCATGGCTaGCTTAATCTGAGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWVSWHG*LNLSFQ
Trigger: TTGAAAGCTCAGATTAAGCAAGCCATGCCAAGAAAC...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000520793.5
ENST00000522441.5
CDS-3UTR CAA 90 bp ATTTTAGAGTCTAGGCTTACACATCGTCCAGTTTCTTGGCATGGCTTGCTTAATAGCAGTAGAAAGCTTTaGAGGTTAATGACAGAATTC +
Preference number: 5 (lower is better)
Translates to: ILESRLTHRPVSWHGLLNSSRKL*RLMTEF
Trigger: GAATTCTGTCATTAACCTCAAAAGCTTTCTACTGCT...ATTAAGCAAGCCATGCCAAGAAACTGGACGATGTGTAAGCCTAGACTCTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTACCCTAAAACTGAGCTaGACAAAGGGAATAAAAGCA +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSTLKLS*TKGIKA
Trigger: TGCTTTTATTCCCTTTGTCAAGCTCAGTTTTAGGGT...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACACCCTAGTCCTTAGTTaGGCAAGTTCCTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYTLVLS*ASSSSK
Trigger: TTTAGAAGAGGAACTTGCCAAACTAAGGACTAGGGT...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACACAATAGTTGACTCCTaGGGCATAGCTATTATGCAG +
Preference number: 5 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYTIVDS*GIAIMQ
Trigger: CTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp TTGGAGAATTACGAATTTGAGAAAGAGGGTTTATTTAGCACATCTCAGAGTTACTCTCATTTGATCTCATaGTTTCCAGAGCTGTTAGCC +
Preference number: 5 (lower is better)
Translates to: LENYEFEKEGLFSTSQSYSHLIS*FPELLA
Trigger: GGCTAACAGCTCTGGAAACAATGAGATCAAATGAGA...GTAACTCTGAGATGTGCTAAATAAACCCTCTTTCTCAAATTCGTAATTCTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp ACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGAAATCTAGCAGTAGAAAGCTTTaGAGGTTAATGACAGAATTC +
Preference number: 5 (lower is better)
Translates to: TIVDSLGIAIMQLQNWKSSSRKL*RLMTEF
Trigger: GAATTCTGTCATTAACCTCAAAAGCTTTCTACTGCT...AGATTTCCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGACCCTAAAACTGAGCTaGACAAAGGGAATAAAAGCA +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWTLKLS*TKGIKA
Trigger: TGCTTTTATTCCCTTTGTCAAGCTCAGTTTTAGGGT...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS-3UTR CAA 90 bp ATATATACAATAGTTGACTCCTTGGGCATAGCTATTATGCAGTTGCAAAACTGGCTTCATCACCTCTATTaGTTTCTTCTTCTACGACAG +
Preference number: 5 (lower is better)
Translates to: IYTIVDSLGIAIMQLQNWLHHLY*FLLLRQ
Trigger: CTGTCGTAGAAGAAGAAACAAATAGAGGTGATGAAG...CCAGTTTTGCAACTGCATAATAGCTATGCCCAAGGAGTCAACTATTGTATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339746.9
ENST00000369408.9
CDS CCA 72 bp CGCCAGGCAGCGCTCTCGGCTCCTGCGGGTTACCTGTaGCCGAGCCCGCCGCGTCCGCCGCCGCAGGGCCCT +
Preference number: 6 (lower is better)
Translates to: RQAALSAPAGYL*PSPPRPPPQGP
Trigger: AGGGCCCTGCGGCGGCGGACGCGGCGGGCTCGGCCACAGGTAACCCGCAGGAGCCGAGAGCGCTGCCTGGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339746.9
CDS CCA 72 bp GACCCGGCCAGCAGGAGGACGCGCGTGCTCTGGGAGTaGCTGTTCTGGCAGGCCAGGTGCAGAGCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: DPASRRTRVLWE*LFWQARCRAVF
Trigger: GAACACAGCTCTGCACCTGGCCTGCCAGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGCTGGCCGGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000518253.5
ENST00000520793.5
ENST00000520886.6
ENST00000522441.5
CDS TCA 72 bp TGGGTAAGCTCCAGAGCTTGGGAGGTGTCCCGAATGTaGGGGCCAGTCTGCTCGCTGCCTGTGGCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: WVSSRAWEVSRM*GPVCSLPVAGG
Trigger: GCCACCAGCCACAGGCAGCGAGCAGACTGGCCCTCACATTCGGGACACCTCCCAAGCTCTGGAGCTTACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CCA 72 bp CCCGCCTTGTCTTGTCTGTCCAGGGCACACCCTTCGTaGATGAGCGCCGCGATGATCTCCGTGTTCCCCACC +
Preference number: 6 (lower is better)
Translates to: PALSCLSRAHPS*MSAAMISVFPT
Trigger: GGTGGGGAACACGGAGATCATCGCGGCGCTCATCCACGAAGGGTGTGCCCTGGACAGACAAGACAAGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520793.5
CDS GCA 72 bp GCGATGATCTCCGTGTTCCCCACCACTGTGGCCCGGTaGAAGGCGGTCTGGTCCCCATCATCCTGGACATCA +
Preference number: 6 (lower is better)
Translates to: AMISVFPTTVAR*KAVWSPSSWTS
Trigger: TGATGTCCAGGATGATGGGGACCAGACCGCCTTGCACCGGGCCACAGTGGTGGGGAACACGGAGATCATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000520793.5
ENST00000520886.6
ENST00000522441.5
ENST00000522705.5
ENST00000523798.5
CDS GCA 72 bp GCGATGATCTCCGTGTTCCCCACCACTGTGGCCCGGTaGAAGGCGGTCTGGTCCCCCTGCAAAGTGACACAA +
Preference number: 6 (lower is better)
Translates to: AMISVFPTTVAR*KAVWSPCKVTQ
Trigger: TTGTGTCACTTTGCAGGGGGACCAGACCGCCTTGCACCGGGCCACAGTGGTGGGGAACACGGAGATCATCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518253.5
CDS CCA 72 bp GTGTTCCCCACCACTGTGGCCCGGTGCAAGGCGGTCTaGTCCCCCTGCAAAGTGACACAAAGGCAGGAACAG +
Preference number: 6 (lower is better)
Translates to: VFPTTVARCKAV*SPCKVTQRQEQ
Trigger: CTGTTCCTGCCTTTGTGTCACTTTGCAGGGGGACCAGACCGCCTTGCACCGGGCCACAGTGGTGGGGAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518253.5
CDS CCA 72 bp ATCTTCGGGACCTGGTTCAGAAAGGTGAACCCCACCTaGATGCGCCCCTCTGGGCAAGCCGACCCTAGCCCA +
Preference number: 6 (lower is better)
Translates to: IFGTWFRKVNPT*MRPSGQADPSP
Trigger: TGGGCTAGGGTCGGCTTGCCCAGAGGGGCGCATCCAGGTGGGGTTCACCTTTCTGAACCAGGTCCCGAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523798.5
CDS CCA 72 bp AGTGGAGTTGAGGGCCTTCTCTTTGGGCCTAACCACTaGAGGGGAGCTGTCGGAAGCTGCTGCTGGACCTGC +
Preference number: 6 (lower is better)
Translates to: SGVEGLLFGPNH*RGAVGSCCWTC
Trigger: GCAGGTCCAGCAGCAGCTTCCGACAGCTCCCCTCCAGTGGTTAGGCCCAAAGAGAAGGCCCTCAACTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000492158.5
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CCA 72 bp TATGCCATCTTCGGGACGGGGACTTCCCTCTGCAGCTaGGATGGCCCAGGCCTCACAAAGGCAAAGCCATGG +
Preference number: 6 (lower is better)
Translates to: YAIFGTGTSLCS*DGPGLTKAKPW
Trigger: CCATGGCTTTGCCTTTGTGAGGCCTGGGCCATCCCAGCTGCAGAGGGAAGTCCCCGTCCCGAAGATGGCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520458.5
CDS CAA 90 bp TCCTGCTGGAGTCTCTGGGTAGCAGTGGAGTTGAGGGCCTTCTCTTaGGGCCTAACCACTGGAGGGGAGCTGTCGGAAGCTGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: SCWSLWVAVELRAFS*GLTTGGELSEAAAG
Trigger: TCCAGCAGCAGCTTCCGACAGCTCCCCTCCAGTGGTTAGGCCCAAAGAGAAGGCCCTCAACTCCACTGCTACCCAGAGACTCCAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000492158.5
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CCA 72 bp CGGGAGCCTGTACAGTCAGAAGACGACAGCTCCTGCTaGAGTCTCTGGGTAGCAGTGGAGTTGAGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: REPVQSEDDSSC*SLWVAVELRAF
Trigger: GAAGGCCCTCAACTCCACTGCTACCCAGAGACTCCAGCAGGAGCTGTCGTCTTCTGACTGTACAGGCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CCA 72 bp GCTGCTGGCTGCGGGTTGCTGGGCACGATGCCTTGTTaGCCCACTCTTCCCAGACTTCTTAGTTTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: AAGCGLLGTMPC*PTLPRLLSLSA
Trigger: GGCACTCAAACTAAGAAGTCTGGGAAGAGTGGGCCAACAAGGCATCGTGCCCAGCAACCCGCAGCCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CCA 72 bp AGCCAGGGCTTTGTGTGGGAAGGCGGGAGGGTCCACTaGGGAACAGCCTCAGGCCTCTCTGACATTTACATG +
Preference number: 6 (lower is better)
Translates to: SQGFVWEGGRVH*GTASGLSDIYM
Trigger: CATGTAAATGTCAGAGAGGCCTGAGGCTGTTCCCCAGTGGACCCTCCCGCCTTCCCACACAAAGCCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520458.5
CDS CAA 72 bp GACAGCTCCTGCTGGAGTCTCTGGGTAGCAGTGGAGTaGAGGGCCTTCTCTTTGGGCCTAACCACTGGAGGG +
Preference number: 6 (lower is better)
Translates to: DSSCWSLWVAVE*RAFSLGLTTGG
Trigger: CCCTCCAGTGGTTAGGCCCAAAGAGAAGGCCCTCAACTCCACTGCTACCCAGAGACTCCAGCAGGAGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CAA 90 bp TCAGAAGACGACAGCTCCTGCTGGAGTCTCTGGGTAGCAGTGGAGTaGAGGGCCTTCTCTTTGGGCCTAACCACTGGAGGGGAGCTGTCG +
Preference number: 6 (lower is better)
Translates to: SEDDSSCWSLWVAVE*RAFSLGLTTGGELS
Trigger: CGACAGCTCCCCTCCAGTGGTTAGGCCCAAAGAGAAGGCCCTCAACTCCACTGCTACCCAGAGACTCCAGCAGGAGCTGTCGTCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CAA 90 bp ATGAGGCGGCCCAGGCATGAACACGAAGAGCTGGACTTGATGCCTTaGACTCCCGTCATCCTGGGCCCCCATGCATGCCTATACCTCCAC +
Preference number: 6 (lower is better)
Translates to: MRRPRHEHEELDLMP*TPVILGPHACLYLH
Trigger: GTGGAGGTATAGGCATGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCGTGTTCATGCCTGGGCCGCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS CAA 90 bp AGGGAGAAGATGAGGCGGCCCAGGCATGAACACGAAGAGCTGGACTaGATGCCTTTGACTCCCGTCATCCTGGGCCCCCATGCATGCCTA +
Preference number: 6 (lower is better)
Translates to: REKMRRPRHEHEELD*MPLTPVILGPHACL
Trigger: TAGGCATGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCGTGTTCATGCCTGGGCCGCCTCATCTTCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS TCA 72 bp GGTGGGGCCTCATGGGAGGTGTTTGTGTCAAGGGGGTaGATGCCTCATGACTGGCTTGGTACCATCCTCACG +
Preference number: 6 (lower is better)
Translates to: GGASWEVFVSRG*MPHDWLGTILT
Trigger: CGTGAGGATGGTACCAAGCCAGTCATGAGGCATTCACCCCCTTGACACAAACACCTCCCATGAGGCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521240.1
CDS TCA 72 bp ATGAATATGCCATCTTCGGGACCTGGTTCAGAAAGGTaGACCCCACCTGGATGCGCCCCTCTGGGCAAGCCG +
Preference number: 6 (lower is better)
Translates to: MNMPSSGPGSER*TPPGCAPLGKP
Trigger: CGGCTTGCCCAGAGGGGCGCATCCAGGTGGGGTTCACCTTTCTGAACCAGGTCCCGAAGATGGCATATTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523798.5
CDS CAA 72 bp AGTCTCTGGGTAGCAGTGGAGTTGAGGGCCTTCTCTTaGGGCCTAACCACTGGAGGGGAGCTGTCGGAAGCT +
Preference number: 6 (lower is better)
Translates to: SLWVAVELRAFS*GLTTGGELSEA
Trigger: AGCTTCCGACAGCTCCCCTCCAGTGGTTAGGCCCAAAGAGAAGGCCCTCAACTCCACTGCTACCCAGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000492158.5
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CAA 72 bp CCCAGGCATGAACACGAAGAGCTGGACTTGATGCCTTaGACTCCCGTCATCCTGGGCCCCCATGCATGCCTA +
Preference number: 6 (lower is better)
Translates to: PRHEHEELDLMP*TPVILGPHACL
Trigger: TAGGCATGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAGTCCAGCTCTTCGTGTTCATGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS GCA 72 bp TTCTCCCCCTCATGCTTCTCTGTGTCTGAGTGCTGTTaGAGGCGGTTCAGGCACTCCGTCCTCTCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: FSPSCFSVSECC*RRFRHSVLSAE
Trigger: TTCTGCAGAGAGGACGGAGTGCCTGAACCGCCTGCAACAGCACTCAGACACAGAGAAGCATGAGGGGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000492158.5
ENST00000518253.5
ENST00000520793.5
ENST00000521004.1
ENST00000522441.5
CDS GCA 72 bp GGACCTGCATCTTCCCTCCTTGGCCCAGGTGGGTACTaGACCTCTGTGTTGGAGGAGTCTTTGTGGTTCATG +
Preference number: 6 (lower is better)
Translates to: GPASSLLGPGGY*TSVLEESLWFM
Trigger: CATGAACCACAAAGACTCCTCCAACACAGAGGTGCAGTACCCACCTGGGCCAAGGAGGGAAGATGCAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS GCA 72 bp CCCAGCCTCAGGTATTCCTGTCGTTTCTCCCCCTCATaGTTCTCTGTGTCTGAGTGCTGTTGCAGGCGGTTC +
Preference number: 6 (lower is better)
Translates to: PSLRYSCRFSPS*FSVSECCCRRF
Trigger: GAACCGCCTGCAACAGCACTCAGACACAGAGAAGCATGAGGGGGAGAAACGACAGGAATACCTGAGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479572.1
CDS GCA 72 bp TATGAATATGCCATCTTCGGGACGGGGACTTCCCTCTaGAGCTGGGATGGCCCAGGCCTCACAAAGGCAAAG +
Preference number: 6 (lower is better)
Translates to: YEYAIFGTGTSL*SWDGPGLTKAK
Trigger: CTTTGCCTTTGTGAGGCCTGGGCCATCCCAGCTGCAGAGGGAAGTCCCCGTCCCGAAGATGGCATATTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520458.5
CDS CCA 72 bp GAATATGCCATCTTCGGGACCTGCATCTTCCCTCCTTaGCCCAGGTGGGTACTGCACCTCTGTGTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: EYAIFGTCIFPP*PRWVLHLCVGG
Trigger: TCCTCCAACACAGAGGTGCAGTACCCACCTGGGCCAAGGAGGGAAGATGCAGGTCCCGAAGATGGCATATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS CAA 90 bp CCTGCATCTTCCCTCCTTGGCCCAGGTGGGTACTGCACCTCTGTGTaGGAGGAGTCTTTGTGGTTCATGGAGAGCCAAACATTCCCACAG +
Preference number: 6 (lower is better)
Translates to: PASSLLGPGGYCTSV*EESLWFMESQTFPQ
Trigger: CTGTGGGAATGTTTGGCTCTCCATGAACCACAAAGACTCCTCCAACACAGAGGTGCAGTACCCACCTGGGCCAAGGAGGGAAGATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS TCA 72 bp TTCCTCAGGCTTCGCCCACGACTGAAGCGCAAGACCTaGAGGAGGCAAACGGCATTGTTACAACCACTGGTG +
Preference number: 6 (lower is better)
Translates to: FLRLRPRLKRKT*RRQTALLQPLV
Trigger: CACCAGTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCCTGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415924.6
ENST00000479572.1
CDS TCA 72 bp GCCTCTCTCTCTTTTTCCTCAGGCTTCGCCCACGACTaGAGCGCAAGACCTGAAGGAGGCAAACGGCATTGT +
Preference number: 6 (lower is better)
Translates to: ASLSFSSGFAHD*SARPEGGKRHC
Trigger: ACAATGCCGTTTGCCTCCTTCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCCTGAGGAAAAAGAGAGAGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415924.6
ENST00000479572.1
CDS GCA 72 bp GTGCTGTTGCAGGCGGTTCAGGCACTCCGTCCTCTCTaGAGAAAGTCGCTCAACCATCAGCTTGTCCAAAAC +
Preference number: 6 (lower is better)
Translates to: VLLQAVQALRPL*RKSLNHQLVQN
Trigger: GTTTTGGACAAGCTGATGGTTGAGCGACTTTCTGCAGAGAGGACGGAGTGCCTGAACCGCCTGCAACAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000492158.5
ENST00000518150.5
ENST00000518253.5
ENST00000520793.5
ENST00000521004.1
ENST00000522441.5
CDS GCA 72 bp CTTGATGCCTTTGACTCCCGTCATCCTGGGCCCCCATaGATGCCTATACCTCCACTGCCTGGTTACATTCCA +
Preference number: 6 (lower is better)
Translates to: LDAFDSRHPGPP*MPIPPLPGYIP
Trigger: TGGAATGTAACCAGGCAGTGGAGGTATAGGCATGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCATCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS CCA 72 bp TGGCTTCTTCTTTTCTGGCCACAGCCTGTTCACTGCTaGGGGTGTCTCCTGCTGAGACACTGCCCTTGCTTT +
Preference number: 6 (lower is better)
Translates to: WLLLFWPQPVHC*GCLLLRHCPCF
Trigger: AAAGCAAGGGCAGTGTCTCAGCAGGAGACACCCCCAGCAGTGAACAGGCTGTGGCCAGAAAAGAAGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000520839.1
ENST00000522441.5
CDS CCA 72 bp TGGGCCTTGACTTTCTCCTCCTGTCATCCTTTGCTCTaGGTTCTGGGGAGGCTGACAGGAACTCTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: WALTFSSCHPLL*VLGRLTGTLLW
Trigger: CCAGAGAAGAGTTCCTGTCAGCCTCCCCAGAACCCAGAGCAAAGGATGACAGGAGGAGAAAGTCAAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518150.5
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CCA 72 bp CCCTCCTTGGCCCAGGTGGGTACTGCACCTCTGTGTTaGAGGAGTCTTTGTGGTTCATGGAGAGCCAAACAT +
Preference number: 6 (lower is better)
Translates to: PSLAQVGTAPLC*RSLCGSWRAKH
Trigger: ATGTTTGGCTCTCCATGAACCACAAAGACTCCTCCAACACAGAGGTGCAGTACCCACCTGGGCCAAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS CAA 72 bp AGAGCTGTGTTCCCCGCCTTGTTCTTGGCAAGCACGTaGGCTCCTGCTTTAATGAGCAGCTTGGCTGACTGG +
Preference number: 6 (lower is better)
Translates to: RAVFPALFLAST*APALMSSLADW
Trigger: CCAGTCAGCCAAGCTGCTCATTAAAGCAGGAGCCAACGTGCTTGCCAAGAACAAGGCGGGGAACACAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000518253.5
ENST00000520886.6
ENST00000522441.5
CDS CAA 72 bp TCCCTCCTTGGCCCAGGTGGGTACTGCACCTCTGTGTaGGAGGAGTCTTTGTGGTTCATGGAGAGCCAAACA +
Preference number: 6 (lower is better)
Translates to: SLLGPGGYCTSV*EESLWFMESQT
Trigger: TGTTTGGCTCTCCATGAACCACAAAGACTCCTCCAACACAGAGGTGCAGTACCCACCTGGGCCAAGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS CAA 90 bp TCAGATCTGGCTGCCTCATTCATGGGTAGCAAGGCTGTCTGGACCTaGACGTTTCTCAGTCGGGAGCCTGTACAGTCAGAAGACGACAGC +
Preference number: 6 (lower is better)
Translates to: SDLAASFMGSKAVWT*TFLSREPVQSEDDS
Trigger: GCTGTCGTCTTCTGACTGTACAGGCTCCCGACTGAGAAACGTCAAGGTCCAGACAGCCTTGCTACCCATGAATGAGGCAGCCAGATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS TCA 72 bp CTGCCTCATTCATGGGTAGCAAGGCTGTCTGGACCTTaGCGTTTCTCAGTCGGGAGCCTGTACAGTCAGAAG +
Preference number: 6 (lower is better)
Translates to: LPHSWVARLSGP*RFSVGSLYSQK
Trigger: CTTCTGACTGTACAGGCTCCCGACTGAGAAACGTCAAGGTCCAGACAGCCTTGCTACCCATGAATGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CAA 72 bp CCTCCTGCCAGCAGAGGACCTGTAACACTGCCCCGATaGAAGTCAGGGAACAATTCACAGATCGGAGGAACA +
Preference number: 6 (lower is better)
Translates to: PPASRGPVTLPR*KSGNNSQIGGT
Trigger: TGTTCCTCCGATCTGTGAATTGTTCCCTGACTTCAATCGGGGCAGTGTTACAGGTCCTCTGCTGGCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS CAA 90 bp GCCTTGTTCTTGGCAAGCACGTTGGCTCCTGCTTTAATGAGCAGCTaGGCTGACTGGCTGAAACCATGCCAGGATGCTTCATGCAAGGCT +
Preference number: 6 (lower is better)
Translates to: ALFLASTLAPALMSS*ADWLKPCQDASCKA
Trigger: AGCCTTGCATGAAGCATCCTGGCATGGTTTCAGCCAGTCAGCCAAGCTGCTCATTAAAGCAGGAGCCAACGTGCTTGCCAAGAACAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000518253.5
ENST00000520886.6
ENST00000522441.5
CDS TCA 72 bp TTGGTAACCGCTACCCTGGCGCCCTTGTTGATGAGCTaGACCACATTCTCTGTTTGGCCTTTGTACGCAGCT +
Preference number: 6 (lower is better)
Translates to: LVTATLAPLLMS*TTFSVWPLYAA
Trigger: AGCTGCGTACAAAGGCCAAACAGAGAATGTGGTTCAGCTCATCAACAAGGGCGCCAGGGTAGCGGTTACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000518150.5
ENST00000520458.5
ENST00000520793.5
ENST00000522441.5
ENST00000522705.5
ENST00000522779.5
ENST00000523798.5
CDS TCA 72 bp GCATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTaGGAGAATTCTCCTTGGACCTGGGGCTCTGACCTA +
Preference number: 6 (lower is better)
Translates to: ALLQPLVCAASV*ENSPWTWGSDL
Trigger: TAGGTCAGAGCCCCAGGTCCAAGGAGAATTCTCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415924.6
CDS GCA 72 bp TCATCCACCAAGGATATCTGTCGTTTCTCCCCCTCATaGTTCTCTGTGTCTGAGTGCTGTTGCAGGCGGTTC +
Preference number: 6 (lower is better)
Translates to: SSTKDICRFSPS*FSVSECCCRRF
Trigger: GAACCGCCTGCAACAGCACTCAGACACAGAGAAGCATGAGGGGGAGAAACGACAGATATCCTTGGTGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000492158.5
ENST00000518253.5
ENST00000520793.5
ENST00000521004.1
ENST00000522441.5
CDS GCA 72 bp ATGCCTTTGACTCCCGTCATCCTGGGCCCCCATGCATaGCTATACCTCCACTGCCTGGTTACATTCCATATT +
Preference number: 6 (lower is better)
Translates to: MPLTPVILGPHA*LYLHCLVTFHI
Trigger: AATATGGAATGTAACCAGGCAGTGGAGGTATAGGCATGCATGGGGGCCCAGGATGACGGGAGTCAAAGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS GCA 72 bp GTTTCCCACAGCCCTAGCATACGTACTGCCTTTCAGTaGAGGAGAGTACAAGAGCTGCTGGTCGTGTTCCTT +
Preference number: 6 (lower is better)
Translates to: VSHSPSIRTAFQ*RRVQELLVVFL
Trigger: AAGGAACACGACCAGCAGCTCTTGTACTCTCCTGCACTGAAAGGCAGTACGTATGCTAGGGCTGTGGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CCA 72 bp GTTCCTTCAGCTCAACACGAAGTCACTGGCCCGGCCTaGCACCCAGAGGTAAAGATGTTCACAATCATCAGA +
Preference number: 6 (lower is better)
Translates to: VPSAQHEVTGPA*HPEVKMFTIIR
Trigger: TCTGATGATTGTGAACATCTTTACCTCTGGGTGCCAGGCCGGGCCAGTGACTTCGTGTTGAGCTGAAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000520458.5
ENST00000522441.5
ENST00000522705.5
ENST00000522779.5
ENST00000523798.5
CDS CAA 72 bp TTGGCAAGCACGTTGGCTCCTGCTTTAATGAGCAGCTaGGCTGACTGGCTGAAACCATGCCAGGATGCTTCA +
Preference number: 6 (lower is better)
Translates to: LASTLAPALMSS*ADWLKPCQDAS
Trigger: TGAAGCATCCTGGCATGGTTTCAGCCAGTCAGCCAAGCTGCTCATTAAAGCAGGAGCCAACGTGCTTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000518253.5
ENST00000520886.6
ENST00000522441.5
CDS CAA 72 bp GGCTTGCTAGTCTGCTCGTCACAGCTTCTGAAAGTCTaGTGTCTGCAGATTTTCACGGACTGCTCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: GLLVCSSQLLKV*CLQIFTDCSLL
Trigger: CAGGAGGGAGCAGTCCGTGAAAATCTGCAGACACAAGACTTTCAGAAGCTGTGACGAGCAGACTAGCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS CAA 90 bp CTCCTTGGCCCAGGTGGGTACTGCACCTCTGTGTTGGAGGAGTCTTaGTGGTTCATGGAGAGCCAAACATTCCCACAGATCTGTTGTCTA +
Preference number: 6 (lower is better)
Translates to: LLGPGGYCTSVLEES*WFMESQTFPQICCL
Trigger: TAGACAACAGATCTGTGGGAATGTTTGGCTCTCCATGAACCACAAAGACTCCTCCAACACAGAGGTGCAGTACCCACCTGGGCCAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS CAA 90 bp GCCTTTCAGTGCAGGAGAGTACAAGAGCTGCTGGTCGTGTTCCTTTaGGACAAAAGGGCTCTCTGTGTGTGGGTTACCTGTAGAGGACTC +
Preference number: 6 (lower is better)
Translates to: AFQCRRVQELLVVFL*DKRALCVWVTCRGL
Trigger: GAGTCCTCTACAGGTAACCCACACACAGAGAGCCCTTTTGTCCAAAAGGAACACGACCAGCAGCTCTTGTACTCTCCTGCACTGAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CAA 90 bp GGACTGCTCCCTCCTGCCAGCAGAGGACCTGTAACACTGCCCCGATaGAAGTCAGGGAACAATTCACAGATCGGAGGAACATTTCTGAAT +
Preference number: 6 (lower is better)
Translates to: GLLPPASRGPVTLPR*KSGNNSQIGGTFLN
Trigger: ATTCAGAAATGTTCCTCCGATCTGTGAATTGTTCCCTGACTTCAATCGGGGCAGTGTTACAGGTCCTCTGCTGGCAGGAGGGAGCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS CAA 90 bp ATGTTTTGTGGCTTGCTAGTCTGCTCGTCACAGCTTCTGAAAGTCTaGTGTCTGCAGATTTTCACGGACTGCTCCCTCCTGCCAGCAGAG +
Preference number: 6 (lower is better)
Translates to: MFCGLLVCSSQLLKV*CLQIFTDCSLLPAE
Trigger: CTCTGCTGGCAGGAGGGAGCAGTCCGTGAAAATCTGCAGACACAAGACTTTCAGAAGCTGTGACGAGCAGACTAGCAAGCCACAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522441.5
CDS GCA 72 bp TTGGCTGACTGGCTGAAACCATGCCAGGATGCTTCATaGAAGGCTGTATTCCCATCCTTGTCTTGTCTGTCC +
Preference number: 6 (lower is better)
Translates to: LADWLKPCQDAS*KAVFPSLSCLS
Trigger: GGACAGACAAGACAAGGATGGGAATACAGCCTTGCATGAAGCATCCTGGCATGGTTTCAGCCAGTCAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000518253.5
ENST00000520886.6
ENST00000522441.5
CDS GCA 72 bp GCTTTAATGAGCAGCTTGGCTGACTGGCTGAAACCATaGCAGGATGCTTCATGCAAGGCTGTATTCCCATCC +
Preference number: 6 (lower is better)
Translates to: ALMSSLADWLKP*QDASCKAVFPS
Trigger: GGATGGGAATACAGCCTTGCATGAAGCATCCTGGCATGGTTTCAGCCAGTCAGCCAAGCTGCTCATTAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000465722.6
ENST00000485637.5
ENST00000518253.5
ENST00000520886.6
ENST00000522441.5
CDS GCA 72 bp GGTTACGAGCAAAATACAGTCCTTGCCCCTACAGAGTaGACTTTACCATCCAGTGTTTCCCACAGCCCTAGC +
Preference number: 6 (lower is better)
Translates to: GYEQNTVLAPTE*TLPSSVSHSPS
Trigger: GCTAGGGCTGTGGGAAACACTGGATGGTAAAGTGCACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CCA 72 bp GGTGGGTACTGCACCTCTGTGTTGGAGGAGTCTTTGTaGTTCATGGAGAGCCAAACATTCCCACAGATCTGT +
Preference number: 6 (lower is better)
Translates to: GGYCTSVLEESL*FMESQTFPQIC
Trigger: ACAGATCTGTGGGAATGTTTGGCTCTCCATGAACCACAAAGACTCCTCCAACACAGAGGTGCAGTACCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS CCA 72 bp GCAGGAGAGTACAAGAGCTGCTGGTCGTGTTCCTTTTaGACAAAAGGGCTCTCTGTGTGTGGGTTACCTGTA +
Preference number: 6 (lower is better)
Translates to: AGEYKSCWSCSF*TKGLSVCGLPV
Trigger: TACAGGTAACCCACACACAGAGAGCCCTTTTGTCCAAAAGGAACACGACCAGCAGCTCTTGTACTCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CCA 72 bp GTACTGCCTTTCAGTGCAGGAGAGTACAAGAGCTGCTaGTCGTGTTCCTTTTGGACAAAAGGGCTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: VLPFSAGEYKSC*SCSFWTKGLSV
Trigger: CACAGAGAGCCCTTTTGTCCAAAAGGAACACGACCAGCAGCTCTTGTACTCTCCTGCACTGAAAGGCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CAA 72 bp TCCGTCCTCTCTGCAGAAAGTCGCTCAACCATCAGCTaGTCCAAAACACGCATCTGCATCACTTTCCCATCC +
Preference number: 6 (lower is better)
Translates to: SVLSAESRSTIS*SKTRICITFPS
Trigger: GGATGGGAAAGTGATGCAGATGCGTGTTTTGGACAAGCTGATGGTTGAGCGACTTTCTGCAGAGAGGACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492158.5
CDS CAA 72 bp TGCAGGAGAGTACAAGAGCTGCTGGTCGTGTTCCTTTaGGACAAAAGGGCTCTCTGTGTGTGGGTTACCTGT +
Preference number: 6 (lower is better)
Translates to: CRRVQELLVVFL*DKRALCVWVTC
Trigger: ACAGGTAACCCACACACAGAGAGCCCTTTTGTCCAAAAGGAACACGACCAGCAGCTCTTGTACTCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS GCA 72 bp TACGTACTGCCTTTCAGTGCAGGAGAGTACAAGAGCTaGTGGTCGTGTTCCTTTTGGACAAAAGGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: YVLPFSAGEYKS*WSCSFWTKGLS
Trigger: AGAGAGCCCTTTTGTCCAAAAGGAACACGACCAGCAGCTCTTGTACTCTCCTGCACTGAAAGGCAGTACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS GCA 72 bp CAGCAAATCTGCAGTGATTTACGTTACAATGTTCGCTaGCTTTTCCCGTTAGCCTCCTCTGCTGATGCTGGC +
Preference number: 6 (lower is better)
Translates to: QQICSDLRYNVR*LFPLASSADAG
Trigger: GCCAGCATCAGCAGAGGAGGCTAACGGGAAAAGGCAGCGAACATTGTAACGTAAATCACTGCAGATTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522441.5
ENST00000522779.5
CDS CCA 72 bp CAATGGTCGTATCTGCTCCGGCTTCCAGTAAGATTTTaGCCACCTTCTTGTGATTTAGGGCAGCAGCAACGT +
Preference number: 6 (lower is better)
Translates to: QWSYLLRLPVRF*PPSCDLGQQQR
Trigger: ACGTTGCTGCTGCCCTAAATCACAAGAAGGTGGCCAAAATCTTACTGGAAGCCGGAGCAGATACGACCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
ENST00000485637.5
ENST00000518253.5
ENST00000520793.5
ENST00000520839.1
ENST00000522441.5
ENST00000524056.5
CDS CCA 72 bp AGACCTGAAGGAGGCAAACGGCATTGTTACAACCACTaGTGTGCGCAGCATCTGTGTGAGAGAATTCTCCTT +
Preference number: 6 (lower is better)
Translates to: RPEGGKRHCYNH*CAQHLCERILL
Trigger: AAGGAGAATTCTCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415924.6
CDS CCA 72 bp TGTGTGTGGGTTACCTGTAGAGGACTCACAAGTAGATaGTGTGGATTTAGCTCTGCAGGCCCTAGAATCTCC +
Preference number: 6 (lower is better)
Translates to: CVWVTCRGLTSR*CGFSSAGPRIS
Trigger: GGAGATTCTAGGGCCTGCAGAGCTAAATCCACACCATCTACTTGTGAGTCCTCTACAGGTAACCCACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CAA 72 bp TCCGTCCTCTCTGCAGAAAGTCGCTCAACCATCAGCTaGTCCAAAACACGCATTTGGTGCTGGGTCTTATTC +
Preference number: 6 (lower is better)
Translates to: SVLSAESRSTIS*SKTRIWCWVLF
Trigger: GAATAAGACCCAGCACCAAATGCGTGTTTTGGACAAGCTGATGGTTGAGCGACTTTCTGCAGAGAGGACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518150.5
ENST00000518253.5
ENST00000520793.5
ENST00000521004.1
ENST00000522441.5
CDS TCA 72 bp AGCTTCCTAGGGCTGTCACTCCCAGCAAATCTGCAGTaGTTTACGTTACAATGTTCGCTGCCTTTTCCCGTT +
Preference number: 6 (lower is better)
Translates to: SFLGLSLPANLQ*FTLQCSLPFPV
Trigger: AACGGGAAAAGGCAGCGAACATTGTAACGTAAATCACTGCAGATTTGCTGGGAGTGACAGCCCTAGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522441.5
ENST00000522779.5
CDS CCA 72 bp GTCGTGTTCCTTTTGGACAAAAGGGCTCTCTGTGTGTaGGTTACCTGTAGAGGACTCACAAGTAGATGGTGT +
Preference number: 6 (lower is better)
Translates to: VVFLLDKRALCV*VTCRGLTSRWC
Trigger: ACACCATCTACTTGTGAGTCCTCTACAGGTAACCCACACACAGAGAGCCCTTTTGTCCAAAAGGAACACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CCA 72 bp GGCCTGCTTTGGGTAACATCCACTCGTCAGTTTAACTaGACATCCCTGAGTTCTTTTTCATGCCAGGTTGTG +
Preference number: 6 (lower is better)
Translates to: GLLWVTSTRQFN*TSLSSFSCQVV
Trigger: CACAACCTGGCATGAAAAAGAACTCAGGGATGTCCAGTTAAACTGACGAGTGGATGTTACCCAAAGCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524056.5
CDS CAA 72 bp TTTGGTGCTGGGTCTTATTCTCCATCTGCCCCAGCTTaGTATTCATTTTGTCCTGAACCGATCCCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: FGAGSYSPSAPA*YSFCPEPIPAL
Trigger: CAGAGCTGGGATCGGTTCAGGACAAAATGAATACAAAGCTGGGGCAGATGGAGAATAAGACCCAGCACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518150.5
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CAA 72 bp GTGGTTCATGGAGAGCCAAACATTCCCACAGATCTGTaGTCTAGTTGGGCCTATTCTGTGGACACATGTGAC +
Preference number: 6 (lower is better)
Translates to: VVHGEPNIPTDL*SSWAYSVDTCD
Trigger: GTCACATGTGTCCACAGAATAGGCCCAACTAGACAACAGATCTGTGGGAATGTTTGGCTCTCCATGAACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS CAA 72 bp TGTTTGTGTCAAGGGGGTGAATGCCTCATGACTGGCTaGGTACCATCCTCACGGTTAGTAAGTTCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: CLCQGGECLMTG*VPSSRLVSSCS
Trigger: AGAGCAAGAACTTACTAACCGTGAGGATGGTACCAAGCCAGTCATGAGGCATTCACCCCCTTGACACAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521240.1
CDS CAA 90 bp CATGGGAGGTGTTTGTGTCAAGGGGGTGAATGCCTCATGACTGGCTaGGTACCATCCTCACGGTTAGTAAGTTCTTGCTCTATTAGTTTT +
Preference number: 6 (lower is better)
Translates to: HGRCLCQGGECLMTG*VPSSRLVSSCSISF
Trigger: AAAACTAATAGAGCAAGAACTTACTAACCGTGAGGATGGTACCAAGCCAGTCATGAGGCATTCACCCCCTTGACACAAACACCTCCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521240.1
CDS TCA 72 bp ATTACCTGGCCTAGGTGTGGCTCTTCAAAGTCAAACTaGGATTTGCCTGAGACTGAAATGGGGCCCTTTGTT +
Preference number: 6 (lower is better)
Translates to: ITWPRCGSSKSN*DLPETEMGPFV
Trigger: AACAAAGGGCCCCATTTCAGTCTCAGGCAAATCTCAGTTTGACTTTGAAGAGCCACACCTAGGCCAGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520839.1
CDS GCA 72 bp ATCCACCAAGGATATCAGATGCAGATGTTGGCAGCATaGTTCTTGTACAGCCTGCAGAACCATAAGCCAAAG +
Preference number: 6 (lower is better)
Translates to: IHQGYQMQMLAA*FLYSLQNHKPK
Trigger: CTTTGGCTTATGGTTCTGCAGGCTGTACAAGAAGCATGCTGCCAACATCTGCATCTGATATCCTTGGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479572.1
CDS CCA 72 bp ATAATCAGTACCATGGAAAGGGCAGTAAATCCTACCTaGGGAGCTTTAGTAAGGAGAAGAGCAACTTCCGGG +
Preference number: 6 (lower is better)
Translates to: IISTMERAVNPT*GALVRRRATSG
Trigger: CCCGGAAGTTGCTCTTCTCCTTACTAAAGCTCCCCAGGTAGGATTTACTGCCCTTTCCATGGTACTGATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS CAA 90 bp AGAATGGACACAGAAAAACATAGGTGGGTCAGAACAGATCTCAGTTaGAACCCAGTAGCTACTGGCTATAGGGTCTCTGGGCAAGTGATT +
Preference number: 6 (lower is better)
Translates to: RMDTEKHRWVRTDLS*NPVATGYRVSGQVI
Trigger: AATCACTTGCCCAGAGACCCTATAGCCAGTAGCTACTGGGTTCAAACTGAGATCTGTTCTGACCCACCTATGTTTTTCTGTGTCCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415924.6
CDS GCA 72 bp CACCAGGTTTTTAATTCATCCACCAAGGATATCAGATaGAGATGTTGGCAGCATGCTTCTTGTACAGCCTGC +
Preference number: 6 (lower is better)
Translates to: HQVFNSSTKDIR*RCWQHASCTAC
Trigger: GCAGGCTGTACAAGAAGCATGCTGCCAACATCTGCATCTGATATCCTTGGTGGATGAATTAAAAACCTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479572.1
ENST00000483473.1
CDS CAA 72 bp CAAGGATATCAGATGCAGATGTTGGCAGCATGCTTCTaGTACAGCCTGCAGAACCATAAGCCAAAGAACTCT +
Preference number: 6 (lower is better)
Translates to: QGYQMQMLAACF*YSLQNHKPKNS
Trigger: AGAGTTCTTTGGCTTATGGTTCTGCAGGCTGTACAAGAAGCATGCTGCCAACATCTGCATCTGATATCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479572.1
CDS CAA 90 bp TATTACATAGCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTaGCCCCTACAGAGTGCACTTTACCATCCAGTGTTTCCCACAGCC +
Preference number: 6 (lower is better)
Translates to: YYIATEYMVTSKIQS*PLQSALYHPVFPTA
Trigger: GGCTGTGGGAAACACTGGATGGTAAAGTGCACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGCTATGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS TCA 72 bp GGTAAAGATGTTCACAATCATCAGAAGATGTCTTTATaGATATGCCATCTTCGGGACCTTTCTCTCCCGCGC +
Preference number: 6 (lower is better)
Translates to: GKDVHNHQKMSL*ICHLRDLSLPR
Trigger: GCGCGGGAGAGAAAGGTCCCGAAGATGGCATATTCATAAAGACATCTTCTGATGATTGTGAACATCTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000447838.6
CDS TCA 72 bp GGTAAAGATGTTCACAATCATCAGAAGATGTCTTTATaGATATGCCATCTTCGGGACATCCGAGGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: GKDVHNHQKMSL*ICHLRDIRGAV
Trigger: GACAGCCCCTCGGATGTCCCGAAGATGGCATATTCATAAAGACATCTTCTGATGATTGTGAACATCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485637.5
ENST00000522441.5
ENST00000522779.5
CDS TCA 72 bp GGTAAAGATGTTCACAATCATCAGAAGATGTCTTTATaGATATGCCATCTTCGGGACGGGGACTTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: GKDVHNHQKMSL*ICHLRDGDFPL
Trigger: CAGAGGGAAGTCCCCGTCCCGAAGATGGCATATTCATAAAGACATCTTCTGATGATTGTGAACATCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520458.5
CDS GCA 72 bp CTTTGTATTCATTTTGTCCTGAACCGATCCCAGCTCTaGTTTTATCTCCTCCACAGTAGCCTCCAACTGATT +
Preference number: 6 (lower is better)
Translates to: LCIHFVLNRSQL*FYLLHSSLQLI
Trigger: AATCAGTTGGAGGCTACTGTGGAGGAGATAAAAGCAGAGCTGGGATCGGTTCAGGACAAAATGAATACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518150.5
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS GCA 72 bp AGATGCAGATGTTGGCAGCATGCTTCTTGTACAGCCTaGAGAACCATAAGCCAAAGAACTCTCTTCTTTACA +
Preference number: 6 (lower is better)
Translates to: RCRCWQHASCTA*RTISQRTLFFT
Trigger: TGTAAAGAAGAGAGTTCTTTGGCTTATGGTTCTGCAGGCTGTACAAGAAGCATGCTGCCAACATCTGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479572.1
CDS GCA 72 bp CAACTGAGTATATGGTTACGAGCAAAATACAGTCCTTaGCCCTACAGAGTGCACTTTACCATCCAGTGTTTC +
Preference number: 6 (lower is better)
Translates to: QLSIWLRAKYSP*PYRVHFTIQCF
Trigger: GAAACACTGGATGGTAAAGTGCACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CCA 72 bp CATTTACTCTGCCTCTTACAGTGCAGAGTGACAGAATaGACACAGAAAAACATAGGTGGGTCAGAACAGATC +
Preference number: 6 (lower is better)
Translates to: HLLCLLQCRVTE*TQKNIGGSEQI
Trigger: GATCTGTTCTGACCCACCTATGTTTTTCTGTGTCCATTCTGTCACTCTGCACTGTAAGAGGCAGAGTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415924.6
CDS CAA 72 bp CAATGTAGCCTTATCTTGCTGGGCTTTCTGATTGGCTaGGCTTCGTGCTTCTTCAATCTTCCTTTCATACCA +
Preference number: 6 (lower is better)
Translates to: QCSLILLGFLIG*ASCFFNLPFIP
Trigger: TGGTATGAAAGGAAGATTGAAGAAGCACGAAGCCAAGCCAATCAGAAAGCCCAGCAAGATAAGGCTACATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS CAA 72 bp GCAACTGAGTATATGGTTACGAGCAAAATACAGTCCTaGCCCCTACAGAGTGCACTTTACCATCCAGTGTTT +
Preference number: 6 (lower is better)
Translates to: ATEYMVTSKIQS*PLQSALYHPVF
Trigger: AAACACTGGATGGTAAAGTGCACTCTGTAGGGGCAAGGACTGTATTTTGCTCGTAACCATATACTCAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483473.1
ENST00000521004.1
CDS CAA 72 bp TTGAGGATACCATCTAACAAACCCAAAAGTTATGGCTaGCCCACTGCTATGGTTTGGATATTTGACCCCTCC +
Preference number: 6 (lower is better)
Translates to: LRIPSNKPKSYG*PTAMVWIFDPS
Trigger: GGAGGGGTCAAATATCCAAACCATAGCAGTGGGCAAGCCATAACTTTTGGGTTTGTTAGATGGTATCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521240.1
CDS CAA 90 bp GTGTTCCTTCAATGTAGCCTTATCTTGCTGGGCTTTCTGATTGGCTaGGCTTCGTGCTTCTTCAATCTTCCTTTCATACCACTTTTCCAT +
Preference number: 6 (lower is better)
Translates to: VFLQCSLILLGFLIG*ASCFFNLPFIPLFH
Trigger: ATGGAAAAGTGGTATGAAAGGAAGATTGAAGAAGCACGAAGCCAAGCCAATCAGAAAGCCCAGCAAGATAAGGCTACATTGAAGGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339746.9
ENST00000369408.9
ENST00000415924.6
ENST00000447838.6
ENST00000479572.1
ENST00000518253.5
ENST00000520793.5
ENST00000522441.5
CDS TCA 72 bp GGTAAAGATGTTCACAATCATCAGAAGATGTCTTTATaGATATGCCATCTTCGGGACCTGCATCTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: GKDVHNHQKMSL*ICHLRDLHLPS
Trigger: GGAGGGAAGATGCAGGTCCCGAAGATGGCATATTCATAAAGACATCTTCTGATGATTGTGAACATCTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465722.6
CDS TCA 72 bp TCCACTGCCTGGTTACATTCCATATTTAAGTTAGTTTaGAGAGGCTTCAGTAGATTGCAACCAGGAGTCCCA +
Preference number: 6 (lower is better)
Translates to: STAWLHSIFKLV*RGFSRLQPGVP
Trigger: TGGGACTCCTGGTTGCAATCTACTGAAGCCTCTTCAAACTAACTTAAATATGGAATGTAACCAGGCAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485637.5
CDS CCA 72 bp CTTCAAAGTCAAACTGAGATTTGCCTGAGACTGAAATaGGGCCCTTTGTTAAAGCGTTATGAGGCTCTACTT +
Preference number: 6 (lower is better)
Translates to: LQSQTEICLRLK*GPLLKRYEALL
Trigger: AAGTAGAGCCTCATAACGCTTTAACAAAGGGCCCCATTTCAGTCTCAGGCAAATCTCAGTTTGACTTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520839.1
CDS CAA 72 bp AAAGTTATGGCTTGCCCACTGCTATGGTTTGGATATTaGACCCCTCCAAATCTCATGTTGAAATTTGATCCC +
Preference number: 6 (lower is better)
Translates to: KVMACPLLWFGY*TPPNLMLKFDP
Trigger: GGGATCAAATTTCAACATGAGATTTGGAGGGGTCAAATATCCAAACCATAGCAGTGGGCAAGCCATAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521240.1
CDS TCA 72 bp GGTAAAGATGTTCACAATCATCAGAAGATGTCTTTATaGATATGCCATCTTCGGGACCTGGTTCAGAAAGGT +
Preference number: 6 (lower is better)
Translates to: GKDVHNHQKMSL*ICHLRDLVQKG
Trigger: ACCTTTCTGAACCAGGTCCCGAAGATGGCATATTCATAAAGACATCTTCTGATGATTGTGAACATCTTTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523798.5
CDS TCA 72 bp GGTAAAGATGTTCACAATCATCAGAAGATGTCTTTATaGATATGCCATCTTCGGGACCTTGTGTTGAAGAGA +
Preference number: 6 (lower is better)
Translates to: GKDVHNHQKMSL*ICHLRDLVLKR
Trigger: TCTCTTCAACACAAGGTCCCGAAGATGGCATATTCATAAAGACATCTTCTGATGATTGTGAACATCTTTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522705.5