RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD53 (Homo sapiens)

Ensembl gene IDs: ENSG00000144031

Ensembl transcript IDs: ENST00000272421.10, ENST00000360589.4, ENST00000441349.5, ENST00000457410.5, ENST00000460927.1, ENST00000483334.1, ENST00000496088.1

Found 556 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCCACCCAGTaGCCGTCCACTGTGTGCAGCCGCGCACCGCCGTGCCCATCAGGC +
Preference number: 1 (lower is better)
Translates to: RSSTSKGSRGTGATQ*PSTVCSRAPPCPSG
Trigger: GCCTGATGGGCACGGCGGTGCGCGGCTGCACACAGTGGACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 90 bp AAAGGCAGCCGCGGCACGGGCGCCACCCAGTGGCCGTCCACTGTGTaGAGCCGCGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAG +
Preference number: 1 (lower is better)
Translates to: KGSRGTGATQWPSTV*SRAPPCPSGLTSRK
Trigger: CTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCGCGGCTGCACACAGTGGACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR TCA 90 bp GCCGCGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTaGAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGGA +
Preference number: 1 (lower is better)
Translates to: AAHRRAHQASPPGSC*SRAPEWGLDARPGG
Trigger: TCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 90 bp GGCGCCACCCAGTGGCCGTCCACTGTGTGCAGCCGCGCACCGCCGTaGCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCC +
Preference number: 1 (lower is better)
Translates to: GATQWPSTVCSRAPP*PSGLTSRKLLKSCS
Trigger: GGAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCGCGGCTGCACACAGTGGACGGCCACTGGGTGGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 90 bp CCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTaGTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGGATGCCCTGC +
Preference number: 1 (lower is better)
Translates to: PPCPSGLTSRKLLKS*SGVGSGCTPRRMPC
Trigger: GCAGGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 90 bp CATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTaGGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGG +
Preference number: 1 (lower is better)
Translates to: HCRRASTEGWKLLER*DSRCSGVLERAVAR
Trigger: CCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 90 bp ACCTCCAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATaGACGCCCAGGCGGATGCCCTGCGAGTGGCTGATCTGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: TSRKLLKSCSGVGSG*TPRRMPCEWLIWVV
Trigger: CACCACCCAGATCAGCCACTCGCAGGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp GCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTaGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCACT +
Preference number: 1 (lower is better)
Translates to: ALGSWRGRWPGLAWY*RPESGLGAACRGAT
Trigger: AGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp CCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTaGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGA +
Preference number: 1 (lower is better)
Translates to: PVALGSWRGRWPGLA*YWRPESGLGAACRG
Trigger: TCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp CCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTaGATGCACGCCCAGGCGGATGCCCTGCGAGTGGCTGATCTGGGT +
Preference number: 1 (lower is better)
Translates to: PHLQEAAEVVLRSGV*MHAQADALRVADLG
Trigger: ACCCAGATCAGCCACTCGCAGGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGAGGTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 90 bp GATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTaGTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCG +
Preference number: 1 (lower is better)
Translates to: DSRCSGVLERAVARA*LVLETREWPGCSLP
Trigger: CGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 90 bp GCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTaGTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTA +
Preference number: 1 (lower is better)
Translates to: ASTEGWKLLERCDSR*SGVLERAVARACLV
Trigger: TACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp TGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTaGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGT +
Preference number: 1 (lower is better)
Translates to: WNAAIPVALGSWRGR*PGLAWYWRPESGLG
Trigger: ACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp GGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTaGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAG +
Preference number: 1 (lower is better)
Translates to: GGSSWNAAIPVALGS*RGRWPGLAWYWRPE
Trigger: CTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp CACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTaGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGA +
Preference number: 1 (lower is better)
Translates to: HRGVEAPGTLRFPLL*GLGEGGGPGLLGIG
Trigger: TCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 90 bp GATGGGCTTGGGCATCTCCGTGGGCTGTGGAATGCATTGCAGGCGTaGATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCG +
Preference number: 1 (lower is better)
Translates to: DGLGHLRGLWNALQA*IHRGVEAPGTLRFP
Trigger: CGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGCATTCCACAGCCCACGGAGATGCCCAAGCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp GTGGAATGCATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTaGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGG +
Preference number: 1 (lower is better)
Translates to: VECIAGVHPQRGGSS*NAAIPVALGSWRGR
Trigger: CCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGCATTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp GGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTaGGTGCAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCT +
Preference number: 1 (lower is better)
Translates to: GGGPGLLGIGDQRVA*VQLAVEPLSDSSFS
Trigger: AGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp TCCGTGGGCTGTGGAATGCATTGCAGGCGTGCATCCACAGAGGGGTaGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTG +
Preference number: 1 (lower is better)
Translates to: SVGCGMHCRRASTEG*KLLERCDSRCSGVL
Trigger: CAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGCATTCCACAGCCCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp GACCGTGGGCTTCCTGTAGATGGGCTTGGGCATCTCCGTGGGCTGTaGAATGCATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCT +
Preference number: 1 (lower is better)
Translates to: DRGLPVDGLGHLRGL*NALQACIHRGVEAP
Trigger: AGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGCATTCCACAGCCCACGGAGATGCCCAAGCCCATCTACAGGAAGCCCACGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 90 bp TGGGCTTCCTGTAGATGGGCTTGGGCATCTCCGTGGGCTGTGGAATaGATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAAC +
Preference number: 1 (lower is better)
Translates to: WASCRWAWASPWAVE*IAGVHPQRGGSSWN
Trigger: GTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGCATTCCACAGCCCACGGAGATGCCCAAGCCCATCTACAGGAAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 90 bp GTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGTaGAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCTGAGA +
Preference number: 1 (lower is better)
Translates to: VARACLVLETREWPG*SLPWSHFLIAASLR
Trigger: TCTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 90 bp TTGTGGGGAGGGCAGGGTGGGGAGTCCTTGATGAGATCGCACAGCTaGCAGGAAGGCTTCATCGAATGTGTCACGCAGGTTCATGGCCAG +
Preference number: 1 (lower is better)
Translates to: LWGGQGGESLMRSHS*QEGFIECVTQVHGQ
Trigger: CTGGCCATGAACCTGCGTGACACATTCGATGAAGCCTTCCTGGCAGCTGTGCGATCTCATCAAGGACTCCCCACCCTGCCCTCCCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp GCACAGCTGCCAGGAAGGCTTCATCGAATGTGTCACGCAGGTTCATaGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCCAGGTGCCGCT +
Preference number: 1 (lower is better)
Translates to: AQLPGRLHRMCHAGS*PECRSRRCCHPGAA
Trigger: AGCGGCACCTGGGTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAAGCCTTCCTGGCAGCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp GCCTCAGGGGGAGAGGTAGCCATAATAACTTTATGGGTTGGTTTGTaGGGAGGGCAGGGTGGGGAGTCCTTGATGAGATCGCACAGCTGC +
Preference number: 1 (lower is better)
Translates to: ASGGEVAIITLWVGL*GGQGGESLMRSHSC
Trigger: GCAGCTGTGCGATCTCATCAAGGACTCCCCACCCTGCCCTCCCCACAAACCAACCCATAAAGTTATTATGGCTACCTCTCCCCCTGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 90 bp TGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTaGAGCCACTTTCTGATAGCAGCTTCTCTGAGAATTTTGTGCTCT +
Preference number: 1 (lower is better)
Translates to: CLVLETREWPGCSLP*SHFLIAASLRILCS
Trigger: AGAGCACAAAATTCTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp TGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCCACCCAGTGGCCGTAGCCGCGCACCGCCGTaGCCATCAGGCCTCACCTCC +
Preference number: 2 (lower is better)
Translates to: CAAAPQKAAAARAPPSGRSRAPP*PSGLTS
Trigger: GGAGGTGAGGCCTGATGGGCACGGCGGTGCGCGGCT...ACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp TGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCCACCCAGTGGCCGTGTTGCTCTGGGGTCTTaGAGAGGGCGGTGGCCCGGG +
Preference number: 2 (lower is better)
Translates to: CAAAPQKAAAARAPPSGRVALGS*RGRWPG
Trigger: CCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAAC...ACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp TGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCCACCCAGTGGCCGTCGCTGCGATTCCCGTTaGTCTGGGGTCTTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: CAAAPQKAAAARAPPSGRRCDSR*SGVLER
Trigger: CCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCG...ACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 90 bp TGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATaGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: CSGVLERAVARACLV*ETREWPGCSLPWSH
Trigger: GTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 90 bp TCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTaGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGG +
Preference number: 2 (lower is better)
Translates to: SRCSGVLERAVARAC*VLETREWPGCSLPW
Trigger: CCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR TCA 90 bp GGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGCCTCCAGGAAGCTGCTaGAGTCGTGCTCCGGAGTGG +
Preference number: 2 (lower is better)
Translates to: GSGKPIGTPPPFLATHNVPPGSC*SRAPEW
Trigger: CCACTCCGGAGCACGACTTCAGCAGCTTCCTGGAGG...CACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp CGCGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCGCATCCACAGAGGGGTaGAAGCTCCTGGAACGCTGC +
Preference number: 2 (lower is better)
Translates to: RAPPCPSGLTSRKLLKSCASTEG*KLLERC
Trigger: GCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGC...GCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 90 bp CGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTaGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCC +
Preference number: 2 (lower is better)
Translates to: RFPLLWGLGEGGGPG*LGIGDQRVAWVQLA
Trigger: GGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 90 bp TGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTaGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: CIHRGVEAPGTLRFP*LWGLGEGGGPGLLG
Trigger: ACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR TCA 90 bp GGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCGCACTTCCCTCATGCTaGTGGGGTAAAAGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: GRVTPRAWEWEAHRHPSPALPSC*WGKSPG
Trigger: CCCAGGGCTTTTACCCCATCAGCATGAGGGAAGTGC...GGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCACCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp GGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCAGAGAGTGGCCTGGGTaGAGCTTGCCGTGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: GTPPPFLATHNVNCHTSAREWPG*SLPWSH
Trigger: GTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCT...GGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp AAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGAGAGAGTGGCCTGGGTaGAGCTTGCCGTGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: KLLERCDSRCSGVLERAVREWPG*SLPWSH
Trigger: GTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCT...CACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp GGCCATACACGTGGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCTTGGAGACCAGAGAGTaGCCTGGGTGCAGCTTGCCG +
Preference number: 2 (lower is better)
Translates to: GHTRGYSMRSSTSKGSRGLETRE*PGCSLP
Trigger: CGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAA...GCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGTGTATGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp GGCCATACACGTGGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCTCCTGTAGATGGGCTTaGGCATCTCCGTGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: GHTRGYSMRSSTSKGSRGSCRWA*ASPWAV
Trigger: CACAGCCCACGGAGATGCCCAAGCCCATCTACAGGA...GCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGTGTATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp AGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCACCCAGGCGGATGCCCTaGGAGTGGCTGATCTGGGTG +
Preference number: 2 (lower is better)
Translates to: SPGAPSFCMAIHVGTACAPRRMP*EWLIWV
Trigger: CACCCAGATCAGCCACTCGCAGGGCATCCGCCTGGG...TGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp TCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCATGGCCGTCCACTGTGTaGAGCCGCGCACCGCCGTGC +
Preference number: 2 (lower is better)
Translates to: SNVSRRFMARVSVQKVLSWPSTV*SRAPPC
Trigger: GCACGGCGGTGCGCGGCTGCACACAGTGGACGGCCA...TGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAAGGGTGCAGCTTGCCGTaGAGCCACTTTCTGATAGCA +
Preference number: 2 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQGCSLP*SHFLIA
Trigger: TGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCC...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp CCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCGACCAGAGAGTGGCCTaGGTGCAGCTTGCCGTGGAG +
Preference number: 2 (lower is better)
Translates to: PWGTFILYGHTRGYSMRSDQRVA*VQLAVE
Trigger: CTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTC...GCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp GCATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCTCTTGGAGAGGGCGGTaGCCCGGGCTTGCTTGGTAT +
Preference number: 2 (lower is better)
Translates to: ALQACIHRGVEAPGTLRFSWRGR*PGLAWY
Trigger: ATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGA...GAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 90 bp CTTCCTGTAGATGGGCTTGGGCATCTCCGTGGGCTGTGGAATGCATaGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTG +
Preference number: 2 (lower is better)
Translates to: LPVDGLGHLRGLWNA*QACIHRGVEAPGTL
Trigger: CAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGCATTCCACAGCCCACGGAGATGCCCAAGCCCATCTACAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCGCGGTGGCCCGGGCTTaGTTGGTATTGGAGACCAGA +
Preference number: 2 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFAVARA*LVLETR
Trigger: TCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGC...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp CGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCCCAGGCGGATGCCCTaGGAGTGGCTGATCTGGGTG +
Preference number: 2 (lower is better)
Translates to: RMCHAGSWPECRSRRCCHPRRMP*EWLIWV
Trigger: CACCCAGATCAGCCACTCGCAGGGCATCCGCCTGGG...GTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACAAGCTCCTGGAACGCTaGGATTCCCGTTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHKLLER*DSRCSG
Trigger: CCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTT...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACCATCTCCGTGGGCTGTaGAATGCATTGCAGGCGTGC +
Preference number: 2 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHHLRGL*NALQAC
Trigger: GCACGCCTGCAATGCATTCCACAGCCCACGGAGATG...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 90 bp AATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTaGTCACCCAGGTGCCGCTTCCTGGGCACTTCCCTCATGCTGATG +
Preference number: 2 (lower is better)
Translates to: NVSRRFMARVSVQKV*SPRCRFLGTSLMLM
Trigger: CATCAGCATGAGGGAAGTGCCCAGGAAGCGGCACCTGGGTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp GTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCCAGGCACGTGGGTACAGCATaGGCAGCAGCACCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: VSRRFMARVSVQKVLSPRHVGTA*AAAPQK
Trigger: CTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGTG...CCTGGGTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACGGGCTTGCTTGGTATTaGAGACCAGAGAGTGGCCTG +
Preference number: 2 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHGLAWY*RPESGL
Trigger: CAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCC...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp CGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCGATTCCCGTTGCTCTaGGGTCTTGGAGAGGGCGGT +
Preference number: 2 (lower is better)
Translates to: RMCHAGSWPECRSRRCCHRFPLL*GLGEGG
Trigger: ACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCG...GTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCGCTTGGGCATCTCCGTaGGCTGTGGAATGCATTGCA +
Preference number: 2 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFAWASP*AVECIA
Trigger: TGCAATGCATTCCACAGCCCACGGAGATGCCCAAGC...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp TCAGGGGGAGAGGTAGCCATAATAACTTTATGGGTTGGTTTGTGGGGAGGGCAGCGGATGCCCTGCGAGTaGCTGATCTGGGTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SGGEVAIITLWVGLWGGQRMPCE*LIWVVG
Trigger: CCCCACCACCCAGATCAGCCACTCGCAGGGCATCCG...CTGCCCTCCCCACAAACCAACCCATAAAGTTATTATGGCTACCTCTCCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp AGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGGCTGTGGAATGCATTaGAGGCGTGCATCCACAGAG +
Preference number: 2 (lower is better)
Translates to: SPGAPSFCMAIHVGTACAGCGMH*RRASTE
Trigger: CTCTGTGGATGCACGCCTGCAATGCATTCCACAGCC...TGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp TCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACGATTCCCGTTGCTCTaGGGTCTTGGAGAGGGCGGT +
Preference number: 2 (lower is better)
Translates to: SNVSRRFMARVSVQKVLSRFPLL*GLGEGG
Trigger: ACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCG...TGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR TCA 90 bp ATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCGCACTTCCCTCATGCTaGTGGGGTAAAAGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: IECVTQVHGQSVGPEGVVALPSC*WGKSPG
Trigger: CCCAGGGCTTTTACCCCATCAGCATGAGGGAAGTGC...GACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp GTTGTTGCTAACATTCCACATTGTGGGCCGCTTGACCGTGGGCTTCCTGTAGATCGCTGCGATTCCCGTTaGTCTGGGGTCTTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: VVANIPHCGPLDRGLPVDRCDSR*SGVLER
Trigger: CCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCG...ATCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGTGGAATGTTAGCAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp TCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCGTGGGCTGTGGAATaGATTGCAGGCGTGCATCCA +
Preference number: 2 (lower is better)
Translates to: SNVSRRFMARVSVQKVLSPWAVE*IAGVHP
Trigger: TGGATGCACGCCTGCAATGCATTCCACAGCCCACGG...TGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp GTTGTTGCTAACATTCCACATTGTGGGCCGCTTGACCGTGGGCTTCCTGTAGATTTGGAGACCAGAGAGTaGCCTGGGTGCAGCTTGCCG +
Preference number: 2 (lower is better)
Translates to: VVANIPHCGPLDRGLPVDLETRE*PGCSLP
Trigger: CGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAA...ATCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGTGGAATGTTAGCAACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp TCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGAGGGGTGGAAGCTCCTaGAACGCTGCGATTCCCGTT +
Preference number: 2 (lower is better)
Translates to: SSNVSRRFMARVSVQKVLRGGSS*NAAIPV
Trigger: AACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCT...CAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp TCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACATCTCCGTGGGCTGTaGAATGCATTGCAGGCGTGC +
Preference number: 2 (lower is better)
Translates to: SNVSRRFMARVSVQKVLSHLRGL*NALQAC
Trigger: GCACGCCTGCAATGCATTCCACAGCCCACGGAGATG...TGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 90 bp CGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTaGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCTGAGAATTTTG +
Preference number: 2 (lower is better)
Translates to: RACLVLETREWPGCS*PWSHFLIAASLRIL
Trigger: CAAAATTCTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp TTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTAGGGGTGGAAGCTCCTaGAACGCTGCGATTCCCGTT +
Preference number: 2 (lower is better)
Translates to: FIECVTQVHGQSVGPEGVRGGSS*NAAIPV
Trigger: AACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCT...AACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CCA 90 bp TCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCAGTATGGCCATACACGTaGGTACAGCATGCGCAGCAG +
Preference number: 2 (lower is better)
Translates to: SNVSRRFMARVSVQKVLSVWPYT*VQHAQQ
Trigger: CTGCTGCGCATGCTGTACCCACGTGTATGGCCATAC...TGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 90 bp ATAACTTTATGGGTTGGTTTGTGGGGAGGGCAGGGTGGGGAGTCCTaGATGAGATCGCACAGCTGCCAGGAAGGCTTCATCGAATGTGTC +
Preference number: 2 (lower is better)
Translates to: ITLWVGLWGGQGGES*MRSHSCQEGFIECV
Trigger: GACACATTCGATGAAGCCTTCCTGGCAGCTGTGCGATCTCATCAAGGACTCCCCACCCTGCCCTCCCCACAAACCAACCCATAAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR GCA 90 bp GTAAAAGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATAATGCATTGCAGGCGTaGATCCACAGAGGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: VKALGHLHSVWPYTWVQHNALQA*IHRGVE
Trigger: TTCCACCCCTCTGTGGATGCACGCCTGCAATGCATT...ATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCTTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 72 bp CGCGGCACGGGCGCCACCCAGTGGCCGTCCACTGTGTaGAGCCGCGCACCGCCGTGCCCATCAGGCCTCACC +
Preference number: 3 (lower is better)
Translates to: RGTGATQWPSTV*SRAPPCPSGLT
Trigger: GGTGAGGCCTGATGGGCACGGCGGTGCGCGGCTGCACACAGTGGACGGCCACTGGGTGGCGCCCGTGCCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 72 bp GAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTaGTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCT +
Preference number: 3 (lower is better)
Translates to: EGWKLLERCDSR*SGVLERAVARA
Trigger: AGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR TCA 72 bp CGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTaGAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGC +
Preference number: 3 (lower is better)
Translates to: RRAHQASPPGSC*SRAPEWGLDAR
Trigger: GCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 72 bp CCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTaGTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGG +
Preference number: 3 (lower is better)
Translates to: PSGLTSRKLLKS*SGVGSGCTPRR
Trigger: CCGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp CAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTaGATGCACGCCCAGGCGGATGCCCTGCGAGTGGCT +
Preference number: 3 (lower is better)
Translates to: QEAAEVVLRSGV*MHAQADALRVA
Trigger: AGCCACTCGCAGGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CAA 90 bp GGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGTGGCCTGGGTGCAGCTaGCCGTGGAGCCACTTTCTG +
Preference number: 3 (lower is better)
Translates to: GSGKPIGTPPPFLATHNVWPGCS*PWSHFL
Trigger: CAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCA...CACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 72 bp TGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTaGTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGC +
Preference number: 3 (lower is better)
Translates to: CSGVLERAVARA*LVLETREWPGC
Trigger: GCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 72 bp AAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATaGACGCCCAGGCGGATGCCCTGCGAGTGGCTGATC +
Preference number: 3 (lower is better)
Translates to: KLLKSCSGVGSG*TPRRMPCEWLI
Trigger: GATCAGCCACTCGCAGGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp CTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTaGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCT +
Preference number: 3 (lower is better)
Translates to: LGSWRGRWPGLA*YWRPESGLGAA
Trigger: AGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp GTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTaGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTT +
Preference number: 3 (lower is better)
Translates to: VEAPGTLRFPLL*GLGEGGGPGLL
Trigger: AAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CAA 90 bp TGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCCACCCAGTGGCCGTGGTCTGGCGGGGTTGTaGCTAACATTCCACATTGTG +
Preference number: 3 (lower is better)
Translates to: CAAAPQKAAAARAPPSGRGLAGL*LTFHIV
Trigger: CACAATGTGGAATGTTAGCAACAACCCCGCCAGACC...ACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 72 bp CGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTaGGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCG +
Preference number: 3 (lower is better)
Translates to: RASTEGWKLLER*DSRCSGVLERA
Trigger: CGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp TCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTaGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGT +
Preference number: 3 (lower is better)
Translates to: SWRGRWPGLAWY*RPESGLGAACR
Trigger: ACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp TCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTaGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGG +
Preference number: 3 (lower is better)
Translates to: SWNAAIPVALGS*RGRWPGLAWYW
Trigger: CCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CAA 90 bp GGCCATACACGTGGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCGGGCTGTGGAATGCATaGCAGGCGTGCATCCACAGA +
Preference number: 3 (lower is better)
Translates to: GHTRGYSMRSSTSKGSRGGLWNA*QACIHR
Trigger: TCTGTGGATGCACGCCTGCAATGCATTCCACAGCCC...GCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGTGTATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR TCA 72 bp GGGAGGCCTGGGGTCTGGGCTTTTGATTGGGAAGGGTaGCTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGC +
Preference number: 3 (lower is better)
Translates to: GRPGVWAFDWEG*LLELGSGKPIG
Trigger: GCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAGGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
3UTR GCA 72 bp GGGCATCTCCGTGGGCTGTGGAATGCATTGCAGGCGTaGATCCACAGAGGGGTGGAAGCTCCTGGAACGCTG +
Preference number: 3 (lower is better)
Translates to: GHLRGLWNALQA*IHRGVEAPGTL
Trigger: CAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGCATTCCACAGCCCACGGAGATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 72 bp GCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCCAGGTaGCGCTTCCTGGGCACTTCCCTCATGCTGATGGGG +
Preference number: 3 (lower is better)
Translates to: ARVSVQKVLSPR*RFLGTSLMLMG
Trigger: CCCCATCAGCATGAGGGAAGTGCCCAGGAAGCGGCACCTGGGTGACAACACCTTCTGGACCGACACTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp GCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTaGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGT +
Preference number: 3 (lower is better)
Translates to: AIPVALGSWRGR*PGLAWYWRPES
Trigger: ACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CAA 90 bp AGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGGCGGTGGCCCGGGCTaGCTTGGTATTGGAGACCAG +
Preference number: 3 (lower is better)
Translates to: SPGAPSFCMAIHVGTACAGGGPG*LGIGDQ
Trigger: CTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCC...TGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp ATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTaGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGG +
Preference number: 3 (lower is better)
Translates to: IAGVHPQRGGSS*NAAIPVALGSW
Trigger: CCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp CCGTGGGCTTCCTGTAGATGGGCTTGGGCATCTCCGTaGGCTGTGGAATGCATTGCAGGCGTGCATCCACAG +
Preference number: 3 (lower is better)
Translates to: PWASCRWAWASP*AVECIAGVHPQ
Trigger: CTGTGGATGCACGCCTGCAATGCATTCCACAGCCCACGGAGATGCCCAAGCCCATCTACAGGAAGCCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CAA 90 bp ACCCAGGTGCCGCTTCCTGGGCACTTCCCTCATGCTGATGGGGTAAAAGCCCTGCGGGCTTGCTTGGTATaGGAGACCAGAGAGTGGCCT +
Preference number: 3 (lower is better)
Translates to: TQVPLPGHFPHADGVKALRACLV*ETREWP
Trigger: AGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCG...CAGGGCTTTTACCCCATCAGCATGAGGGAAGTGCCCAGGAAGCGGCACCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CAA 90 bp GTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCCAGGGTGGCCCGGGCTTGCTaGGTATTGGAGACCAGAGAG +
Preference number: 3 (lower is better)
Translates to: VSRRFMARVSVQKVLSPRVARAC*VLETRE
Trigger: CTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCAC...CCTGGGTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CAA 90 bp TTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTCGTTGCTCTGGGGTCTaGGAGAGGGCGGTGGCCCGG +
Preference number: 3 (lower is better)
Translates to: FIECVTQVHGQSVGPEGVRCSGV*ERAVAR
Trigger: CCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACG...AACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CAA 90 bp GGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCGGGGGTCTGGCGGGGTaGTTGCTAACATTCCACATT +
Preference number: 3 (lower is better)
Translates to: GTPPPFLATHNVNCHTSAGGLAG*LLTFHI
Trigger: AATGTGGAATGTTAGCAACAACCCCGCCAGACCCCC...GGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp CTTCCTGTAGATGGGCTTGGGCATCTCCGTGGGCTGTaGAATGCATTGCAGGCGTGCATCCACAGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: LPVDGLGHLRGL*NALQACIHRGV
Trigger: CACCCCTCTGTGGATGCACGCCTGCAATGCATTCCACAGCCCACGGAGATGCCCAAGCCCATCTACAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CAA 90 bp AACATTCCACATTGTGGGCCGCTTGACCGTGGGCTTCCTGTAGATGGGCTTGGGCGGGCTTGCTTGGTATaGGAGACCAGAGAGTGGCCT +
Preference number: 3 (lower is better)
Translates to: NIPHCGPLDRGLPVDGLGRACLV*ETREWP
Trigger: AGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCG...CCCAAGCCCATCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGTGGAATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 72 bp GGGCAGGGTGGGGAGTCCTTGATGAGATCGCACAGCTaGCAGGAAGGCTTCATCGAATGTGTCACGCAGGTT +
Preference number: 3 (lower is better)
Translates to: GQGGESLMRSHS*QEGFIECVTQV
Trigger: AACCTGCGTGACACATTCGATGAAGCCTTCCTGGCAGCTGTGCGATCTCATCAAGGACTCCCCACCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp TGTGGAATGCATTGCAGGCGTGCATCCACAGAGGGGTaGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCT +
Preference number: 3 (lower is better)
Translates to: CGMHCRRASTEG*KLLERCDSRCS
Trigger: AGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGCATTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp GCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTaGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAG +
Preference number: 3 (lower is better)
Translates to: ALGHLHSVWPYT*VQHAQQHLKRQ
Trigger: CTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR GCA 72 bp GCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGTaGAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCT +
Preference number: 3 (lower is better)
Translates to: ACLVLETREWPG*SLPWSHFLIAA
Trigger: AGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR-3UTR CAA 90 bp TCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGGGGCTGTGGAATGCATaGCAGGCGTGCATCCACAGA +
Preference number: 3 (lower is better)
Translates to: SSNVSRRFMARVSVQKVLGLWNA*QACIHR
Trigger: TCTGTGGATGCACGCCTGCAATGCATTCCACAGCCC...CAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp CCAGGAAGGCTTCATCGAATGTGTCACGCAGGTTCATaGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCCA +
Preference number: 3 (lower is better)
Translates to: PGRLHRMCHAGS*PECRSRRCCHP
Trigger: TGGGTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAAGCCTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CCA 72 bp GGAGAGGTAGCCATAATAACTTTATGGGTTGGTTTGTaGGGAGGGCAGGGTGGGGAGTCCTTGATGAGATCG +
Preference number: 3 (lower is better)
Translates to: GEVAIITLWVGL*GGQGGESLMRS
Trigger: CGATCTCATCAAGGACTCCCCACCCTGCCCTCCCCACAAACCAACCCATAAAGTTATTATGGCTACCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp TGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCCACCCAGTGGCCGTCCGGGGGCCACTCCTTaGCAGCTGGCCGCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: CAAAPQKAAAARAPPSGRPGATP*QLAAVS
Trigger: GGAAACCGCGGCCAGCTGGCAAGGAGTGGCCCCCGG...ACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCGGCTGCCTCTCTAGCTaGAGGGGCAGAGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RCDSRCSGVLERAVARACGCLSS*RGRARG
Trigger: CCCCCGGGCTCTGCCCCTCCAGCTAGAGAGGCAGCC...GCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCCCCCACCCGCCGCTCTaGTCCCGGTCTGAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: GTLRFPLLWGLGEGGGPGPHPPL*SRSEPK
Trigger: TTTTGGCTCAGACCGGGAGCAGAGCGGCGGGTGGGG...GCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR GCA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCCCGGGGGCCACTCCTTaGCAGCTGGCCGCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLELGSGKPIGTPPPFLAPGATP*QLAAVS
Trigger: GGAAACCGCGGCCAGCTGGCAAGGAGTGGCCCCCGG...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp TGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCCACCCAGTGGCCGTCCACTTGGAGTTGGCTaGGGCCGAGCACCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: CAAAPQKAAAARAPPSGRPLGVG*GRAPLP
Trigger: AGGGAGAGGTGCTCGGCCGCAGCCAACTCCAAGTGG...ACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGAGCCGCGCACCGCCGTaGCCATCAGGCCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: QEAAEVVLRSGVWMHAQASRAPP*PSGLTS
Trigger: GGAGGTGAGGCCTGATGGGCACGGCGGTGCGCGGCT...CGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCCCACTCCTTGCCAGCTaGCCGCGGTTTCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: RTAVPIRPHLQEAAEVVLPLLAS*PRFPGP
Trigger: GGGGCCGGGAAACCGCGGCCAGCTGGCAAGGAGTGG...GAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp TGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCCACCCAGTGGCCGTCTGCATGGAGCCACTTaGAGTTGGCTGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: CAAAPQKAAAARAPPSGRLHGAT*SWLRPS
Trigger: GCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAG...ACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGGGTCGGACTCCTTGCTaGGGCTGGGGTCAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: GSGKPIGTPPPFLATHNVGRTPC*GWGQRG
Trigger: CCCGCGCTGACCCCAGCCCCAGCAAGGAGTCCGACC...CACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp GGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGCGAGGGCAGTCGCCTaGGCACTGAGGTGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: GEGGGPGLLGIGDQRVAWARAVA*ALRWSA
Trigger: CGCAGACCACCTCAGTGCGCAGGCGACTGCCCTCGC...CCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR GCA 90 bp ACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCAGCCGCGCACCGCCGTaGCCATCAGGCCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: TPRAWEWEAHRHPSPFPRSRAPP*PSGLTS
Trigger: GGAGGTGAGGCCTGATGGGCACGGCGGTGCGCGGCT...GCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp ACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCTGGCCGTCCACTGTGTaGAGCCGCGCACCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: TPRAWEWEAHRHPSPFPRWPSTV*SRAPPC
Trigger: GCACGGCGGTGCGCGGCTGCACACAGTGGACGGCCA...GCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTGGGGCTGGGCTaGTTGGACTCCGCGTCAGTC +
Preference number: 4 (lower is better)
Translates to: GTLRFPLLWGLGEGGGPGLLGLG*LDSASV
Trigger: GACTGACGCGGAGTCCAAGCAGCCCAGCCCCAGCAA...GCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441349.5
CDS-3UTR CCA 90 bp GTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGGATGCCCTGCGAGTGGCTGGAGCCACTTGGAGTTaGCTGCGGCCGAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: VLRSGVWMHAQADALRVAGATWS*LRPSTS
Trigger: AGAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCC...AGCCACTCGCAGGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCCCTCGAGCTTGGGAGTaGGAAGCCCATAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: GTLRFPLLWGLGEGGGPGPRAWE*EAHRHP
Trigger: GGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGG...GCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 72 bp AGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTaGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: RGVEAPGTLRFP*LWGLGEGGGPG
Trigger: GCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACAGTCGCCTGCGCACTaGGGTGGTCTGCGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQQSPAH*GGLRGR
Trigger: CCGACCTCGCAGACCACCTCAGTGCGCAGGCGACTG...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGCACTGAGGTGGTCTaGGAGGTCGGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQRTEVV*EVGQGL
Trigger: CAGCCCCTGCCCGACCTCGCAGACCACCTCAGTGCG...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAAGCGAGGGCAGTCGCCTaGGCACTGAGGTGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQARAVA*ALRWSA
Trigger: CGCAGACCACCTCAGTGCGCAGGCGACTGCCCTCGC...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp GGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCGCAGCCATTCCACGTTaGCCACAGCCGCTGCGAACA +
Preference number: 4 (lower is better)
Translates to: GTLRFPLLWGLGEGGGPGAAIPR*PQPLRT
Trigger: TGTTCGCAGCGGCTGTGGGCAACGTGGAATGGCTGC...GCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CGCGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCCCAGCAGGTAGTAGATaGAGGGGAGGGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: RAPPCPSGLTSRKLLKSCPAGSR*RGGPRW
Trigger: CCACCGTGGCCCTCCCCTGCATCTACTACCTGCTGG...GCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAATCACGGGCTGCCAGGTaGAGGGGCGTGGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQSRAAR*RGVEPL
Trigger: CAACGGCTCCACGCCCCTGCACCTGGCAGCCCGTGA...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp GGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGCCCAGGCGGATGCCCTaGGAGTGGCTGATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GSGKPIGTPPPFLATHNVPRRMP*EWLIWV
Trigger: CACCCAGATCAGCCACTCGCAGGGCATCCGCCTGGG...CACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCCCCAGGCGGATGCCCTaGGAGTGGCTGATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GRVTPRAWEWEAHRHPSPPRRMP*EWLIWV
Trigger: CACCCAGATCAGCCACTCGCAGGGCATCCGCCTGGG...GGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCACCCTTCC
67% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp ACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCGGAGTGGGGTCTGGATaGACGCCCAGGCGGATGCCC +
Preference number: 4 (lower is better)
Translates to: TPRAWEWEAHRHPSPFPRGVGSG*TPRRMP
Trigger: GGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCC...GCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTGGCCGTCCACTGTGTaGAGCCGCGCACCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: AHRHPSPFPRHPQRELPHWPSTV*SRAPPC
Trigger: GCACGGCGGTGCGCGGCTGCACACAGTGGACGGCCA...GTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGCCACTCCTTGCCAGCTaGCCGCGGTTTCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: GWKLLERCDSRCSGVLERPLLAS*PRFPGP
Trigger: GGGGCCGGGAAACCGCGGCCAGCTGGCAAGGAGTGG...CCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACCGGGCAGGGGCTGGCTaGGCTGCTTGGACTCCGCGT +
Preference number: 4 (lower is better)
Translates to: AHRHPSPFPRHPQRELPHRAGAG*AAWTPR
Trigger: ACGCGGAGTCCAAGCAGCCCAGCCAGCCCCTGCCCG...GTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp GCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAAGGTCGGGCAGGGGCTaGCTGGGCTGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: ALGSWRGRWPGLAWYWRPRSGRG*LGCLDS
Trigger: GGAGTCCAAGCAGCCCAGCCAGCCCCTGCCCGACCT...TGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CCA 90 bp GCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCGGTCGGACTCCTTGCTaGGGCTGGGGTCAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: ACIHRGVEAPGTLRFPLLGRTPC*GWGQRG
Trigger: CCCGCGCTGACCCCAGCCCCAGCAAGGAGTCCGACC...GAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAAGTTGCTCTGGGGTCTTaGAGAGGGCGGTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQVALGS*RGRWPG
Trigger: CCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAAC...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGGATGCCCTGCGAGTGGCTGCATCCACAGAGGGGTaGAAGCTCCTGGAACGCTGC +
Preference number: 4 (lower is better)
Translates to: VLRSGVWMHAQADALRVAASTEG*KLLERC
Trigger: GCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGC...AGCCACTCGCAGGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGCGGATGCCCTGCGAGTaGCTGATCTGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QEAAEVVLRSGVWMHAQARMPCE*LIWVVG
Trigger: CCCCACCACCCAGATCAGCCACTCGCAGGGCATCCG...CGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp GGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGCCTCCAGGAAGCTGCTaGAGTCGTGCTCCGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GEGGGPGLLGIGDQRVAWPPGSC*SRAPEW
Trigger: CCACTCCGGAGCACGACTTCAGCAGCTTCCTGGAGG...CCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCTCTCCCCTTTCTGAGTaGCAGCTTCCGGAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LLELGSGKPIGTPPPFLASPLSE*QLPEPA
Trigger: GGCGGGCTCCGGAAGCTGGCACTCAGAAAGGGGAGA...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp CGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCCCACTTGGAGTTGGCTaGGGCCGAGCACCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RTAVPIRPHLQEAAEVVLPLGVG*GRAPLP
Trigger: AGGGAGAGGTGCTCGGCCGCAGCCAACTCCAAGTGG...GAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp ACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCTCTGGTCGGACTCCTTaGTGGGGCTGGGGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: TPRAWEWEAHRHPSPFPRSGRTP*WGWGQR
Trigger: GCGCTGACCCCAGCCCCAGCAAGGAGTCCGACCAGA...GCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp CGCGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCCGCCGTCTGGTCGATTaGCGTCTGGTCGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: RAPPCPSGLTSRKLLKSCRRLVD*RLVGLL
Trigger: AAGGAGTCCGACCAGACGGCAATCGACCAGACGGCG...GCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCAGAGAGTGGCCTGGGTaGAGCTTGCCGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLELGSGKPIGTPPPFLAREWPG*SLPWSH
Trigger: GTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCT...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp TGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCCACCCAGTGGCCGTGGCTGTGGAATGCATTaGAGGCGTGCATCCACAGAG +
Preference number: 4 (lower is better)
Translates to: CAAAPQKAAAARAPPSGRGCGMH*RRASTE
Trigger: CTCTGTGGATGCACGCCTGCAATGCATTCCACAGCC...ACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGAGTGGGGTCTGGATaGACGCCCAGGCGGATGCCC +
Preference number: 4 (lower is better)
Translates to: GVEAPGTLRFPLLWGLGEGVGSG*TPRRMP
Trigger: GGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCC...CTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GCATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCAGCCGCGCACCGCCGTaGCCATCAGGCCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: ALQACIHRGVEAPGTLRFSRAPP*PSGLTS
Trigger: GGAGGTGAGGCCTGATGGGCACGGCGGTGCGCGGCT...GAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACAGGCCATCGCGGGGCTaGAACTCGGACCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHRPSRG*NSDPGR
Trigger: CCGGCCCGGGTCCGAGTTCCAGCCCCGCGATGGCCT...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGGAGCCACTTGGAGTTaGCTGCGGCCGAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: GEGGGPGLLGIGDQRVAWGATWS*LRPSTS
Trigger: AGAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCC...CCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCGGAGCCACTTGGAGTTaGCTGCGGCCGAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: LLELGSGKPIGTPPPFLAGATWS*LRPSTS
Trigger: AGAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCC...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGCTGCATGGAGCCACTTaGAGTTGGCTGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GSGKPIGTPPPFLATHNVLHGAT*SWLRPS
Trigger: GCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAG...CACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGCTGGCTGGGCTGCTTaGACTCCGCGTCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALGSWRGRWPGLAWYWRPAGWAA*TPRQSR
Trigger: CCTGGACTGACGCGGAGTCCAAGCAGCCCAGCCAGC...TGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CCA 90 bp GAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAAAGGTCGGGCAGGGGCTaGCTGGGCTGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: EWEAHRHPSPFPRHPQRERSGRG*LGCLDS
Trigger: GGAGTCCAAGCAGCCCAGCCAGCCCCTGCCCGACCT...TTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACTCCTTGCTGGGGCTaGGGTCAGCGCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFTPCWG*GQRGAG
Trigger: CCCCGCCCCGCGCTGACCCCAGCCCCAGCAAGGAGT...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp CAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGAGTCGTGCTCCGGAGTaGGGTCTGGATGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: QEAAEVVLRSGVWMHAQASRAPE*GLDARP
Trigger: TGGGCGTGCATCCAGACCCCACTCCGGAGCACGACT...CGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCGTGACTCCTCGAGCTTaGGAGTGGGAAGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: RCDSRCSGVLERAVARACVTPRA*EWEAHR
Trigger: CCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCAC...GCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 72 bp GTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATaGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: VLERAVARACLV*ETREWPGCSLP
Trigger: CGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 72 bp TCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTaGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGVLERAVARAC*VLETREWPGCS
Trigger: GCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp ACGTGGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCGCACTTCCCTCATGCTaGTGGGGTAAAAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TWVQHAQQHLKRQPRHGRALPSC*WGKSPG
Trigger: CCCAGGGCTTTTACCCCATCAGCATGAGGGAAGTGC...GCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCCCGCTAGGGTTCGGCTaGCTCTCTAGCTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ACIHRGVEAPGTLRFPLLPLGFG*LSSWRG
Trigger: GCCCCTCCAGCTAGAGAGGCAGCCGAACCCTAGCGG...GAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp AAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACCGCACTGAGGTGGTCTaGGAGGTCGGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KPIGTPPPFLATHNVNCHRTEVV*EVGQGL
Trigger: CAGCCCCTGCCCGACCTCGCAGACCACCTCAGTGCG...GTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp GCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTCTGGTCGGACTCCTTaGTGGGGCTGGGGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: AHRHPSPFPRHPQRELPHSGRTP*WGWGQR
Trigger: GCGCTGACCCCAGCCCCAGCAAGGAGTCCGACCAGA...GTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp GGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCCGCCGTCTGGTCGATTaGCGTCTGGTCGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: GRVTPRAWEWEAHRHPSPRRLVD*RLVGLL
Trigger: AAGGAGTCCGACCAGACGGCAATCGACCAGACGGCG...GGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCACCCTTCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGGCAGGCATGCAAGCTTaGCCCATTGGGCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: GSGKPIGTPPPFLATHNVAGMQA*PIGRRS
Trigger: ACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGC...CACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCCAGGACCTGCAGGCATaGAAGCTTGCCCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: GRVTPRAWEWEAHRHPSPQDLQA*KLAPLG
Trigger: GCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTG...GGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCACCCTTCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp CAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGCGCTGCGATTCCCGTTaGTCTGGGGTCTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QEAAEVVLRSGVWMHAQARCDSR*SGVLER
Trigger: CCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCG...CGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCTGGCCGTCCACTGTGTaGAGCCGCGCACCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: PWGTFILYGHTRGYSMRSWPSTV*SRAPPC
Trigger: GCACGGCGGTGCGCGGCTGCACACAGTGGACGGCCA...GCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTGGCTGCCTCTCTAGCTaGAGGGGCAGAGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HPSPFPRHPQRELPHFSLGCLSS*RGRARG
Trigger: CCCCCGGGCTCTGCCCCTCCAGCTAGAGAGGCAGCC...AAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTGTTCGCCTGCTGCATaGAGCCACTTGGAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GTLRFPLLWGLGEGGGPGCSPAA*SHLELA
Trigger: AGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACA...GCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCGCTGGCTGGGCTGCTTaGACTCCGCGTCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCAGWAA*TPRQSR
Trigger: CCTGGACTGACGCGGAGTCCAAGCAGCCCAGCCAGC...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp CCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCCGGGCAGGGGCTGGCTaGGCTGCTTGGACTCCGCGT +
Preference number: 4 (lower is better)
Translates to: PWGTFILYGHTRGYSMRSRAGAG*AAWTPR
Trigger: ACGCGGAGTCCAAGCAGCCCAGCCAGCCCCTGCCCG...GCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CCA 90 bp TGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGGCCTGCGCACTGAGGTaGTCTGCGAGGTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: WEAHRHPSPFPRHPQRELACALR*SARSGR
Trigger: CCTGCCCGACCTCGCAGACCACCTCAGTGCGCAGGC...CAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp ACGTGGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCAGGGGTGGAAGCTCCTaGAACGCTGCGATTCCCGTT +
Preference number: 4 (lower is better)
Translates to: TWVQHAQQHLKRQPRHGRRGGSS*NAAIPV
Trigger: AACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCT...GCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGCTCCGGAGTGGGGTCTaGATGCACGCCCAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: GVEAPGTLRFPLLWGLGELRSGV*MHAQAD
Trigger: ATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAG...CTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTGGGGCTGGGCTGCTTaGACTCCGCGTCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTPPPFLATHNVNCHTSAWGWAA*TPRQSR
Trigger: CCTGGACTGACGCGGAGTCCAAGCAGCCCAGCCCCA...GGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441349.5
CDS-3UTR CCA 90 bp GCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAACTCCTTGCTGGGGCTaGGCTGCTTGGACTCCGCGT +
Preference number: 4 (lower is better)
Translates to: ALGSWRGRWPGLAWYWRPTPCWG*AAWTPR
Trigger: ACGCGGAGTCCAAGCAGCCCAGCCCCAGCAAGGAGT...TGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441349.5
3UTR CAA 72 bp TTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTaGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLWGLGEGGGPG*LGIGDQRVAWV
Trigger: CACCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp GCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGCTCTGCTCCCGGTCTaGGCCAAAACCCCCACTCAA +
Preference number: 4 (lower is better)
Translates to: ALGSWRGRWPGLAWYWRPALLPV*AKTPTQ
Trigger: TTGAGTGGGGGTTTTGGCTCAGACCGGGAGCAGAGC...TGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR TCA 90 bp TGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGCCCTTCTCCCCTTTCTaGGTGCCAGCTTCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: WKLLERCDSRCSGVLERAPFSPF*VPASGA
Trigger: GGCTCCGGAAGCTGGCACTCAGAAAGGGGAGAAGGG...CGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCCGGTGGGGATTTCCCTaGGGCTCTGGTTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LLELGSGKPIGTPPPFLARWGFP*GSGSDR
Trigger: TCTGTCTGAACCAGAGCCTCAGGGAAATCCCCACCG...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR TCA 90 bp GGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGCGGTGGGGATTTCCCTaGGGCTCTGGTTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: GEGGGPGLLGIGDQRVAWRWGFP*GSGSDR
Trigger: TCTGTCTGAACCAGAGCCTCAGGGAAATCCCCACCG...CCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp CGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCTGTTGTCCCTGTGGATaGCGAGGTGCAGGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RTAVPIRPHLQEAAEVVLCCPCG*RGAGVS
Trigger: AGACACCCCTGCACCTCGTCATCCACAGGGACAACA...GAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp CGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCACATTGTGGGCCGCTTaGCCGTGGGCTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: RTAVPIRPHLQEAAEVVLTLWAA*PWASCR
Trigger: TCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGT...GAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp GCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACCCTCCAGGAAGCTGCTaGAGTCGTGCTCCGGAGTGG +
Preference number: 4 (lower is better)
Translates to: AHRHPSPFPRHPQRELPHPPGSC*SRAPEW
Trigger: CCACTCCGGAGCACGACTTCAGCAGCTTCCTGGAGG...GTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR TCA 90 bp CGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCGCACTTCCCTCATGCTaGTGGGGTAAAAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RTAVPIRPHLQEAAEVVLALPSC*WGKSPG
Trigger: CCCAGGGCTTTTACCCCATCAGCATGAGGGAAGTGC...GAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp GGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGGCACTTCCCTCATGCTaGTGGGGTAAAAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSGKPIGTPPPFLATHNVALPSC*WGKSPG
Trigger: CCCAGGGCTTTTACCCCATCAGCATGAGGGAAGTGC...CACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR TCA 90 bp ACGTGGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCTCGCCACCCACAACGTaGATTGCCACACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TWVQHAQQHLKRQPRHGRSPPTT*IATLQP
Trigger: AGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGA...GCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp ACGTGGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCTGGGGTCTGGGCTTTTaGTTGGGAAGGGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: TWVQHAQQHLKRQPRHGRWGLGF*LGRVTP
Trigger: AGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCA...GCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR GCA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCCACTTGGAGTTGGCTaGGGCCGAGCACCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCPLGVG*GRAPLP
Trigger: AGGGAGAGGTGCTCGGCCGCAGCCAACTCCAAGTGG...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp ACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCGCCGTCTGGTCGATTaGCGTCTGGTCGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: TPRAWEWEAHRHPSPFPRRRLVD*RLVGLL
Trigger: AAGGAGTCCGACCAGACGGCAATCGACCAGACGGCG...GCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GGCCATACACGTGGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCGCAGCCATTCCACGTTaGCCACAGCCGCTGCGAACA +
Preference number: 4 (lower is better)
Translates to: GHTRGYSMRSSTSKGSRGAAIPR*PQPLRT
Trigger: TGTTCGCAGCGGCTGTGGGCAACGTGGAATGGCTGC...GCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGTGTATGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACAGGACCTGCAGGCATaGAAGCTTGCCCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQQDLQA*KLAPLG
Trigger: GCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTG...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp CTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTCACGGGCTGCCAGGTaGAGGGGCGTGGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LGIGDQRVAWVQLAVEPLSRAAR*RGVEPL
Trigger: CAACGGCTCCACGCCCCTGCACCTGGCAGCCCGTGA...AAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR GCA 90 bp GGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGAAGCTCCTGGAACGCTaGGATTCCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GEGGGPGLLGIGDQRVAWKLLER*DSRCSG
Trigger: CCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTT...CCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTGGAGTGGGGTCTGGATaGACGCCCAGGCGGATGCCC +
Preference number: 4 (lower is better)
Translates to: LGIGDQRVAWVQLAVEPLGVGSG*TPRRMP
Trigger: GGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCC...AAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGAAGCTGCTGAAGTCGTaGTCCGGAGTGGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GEGGGPGLLGIGDQRVAWKLLKS*SGVGSG
Trigger: TCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTT...CCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGTCTGGTCGGACTCCTTaGTGGGGCTGGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GVEAPGTLRFPLLWGLGESGRTP*WGWAAW
Trigger: CCAAGCAGCCCAGCCCCAGCAAGGAGTCCGACCAGA...CTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441349.5
CDS-3UTR CCA 90 bp GCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACCTGCATGGAGCCACTTaGAGTTGGCTGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: AHRHPSPFPRHPQRELPHLHGAT*SWLRPS
Trigger: GCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAG...GTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCGCCTGCGCACTGAGGTaGTCTGCGAGGTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFACALR*SARSGR
Trigger: CCTGCCCGACCTCGCAGACCACCTCAGTGCGCAGGC...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAATGGTCGATTGCCGTCTaGTCGGACTCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQWSIAV*SDSLLG
Trigger: CCCCAGCAAGGAGTCCGACCAGACGGCAATCGACCA...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAACTCCCGATCGCCGTCTaGTCGATTGCCGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: EWEAHRHPSPFPRHPQRELPIAV*SIAVWS
Trigger: CGACCAGACGGCAATCGACCAGACGGCGATCGGGAG...TTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp AAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGCCAGGTGCAGGGGCGTaGAGCCGTTGCATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: KLLERCDSRCSGVLERAVPGAGA*SRCMSE
Trigger: CTCAGACATGCAACGGCTCCACGCCCCTGCACCTGG...CACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CCA 90 bp TCCAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGTTGGAGACCAGAGAGTaGCCTGGGTGCAGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: SRKLLKSCSGVGSGCTPRLETRE*PGCSLP
Trigger: CGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAA...CCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGTCCTGTAGATGGGCTTaGGCATCTCCGTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSGKPIGTPPPFLATHNVSCRWA*ASPWAV
Trigger: CACAGCCCACGGAGATGCCCAAGCCCATCTACAGGA...CACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp TGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGAGTCGTGCTCCGGAGTaGGGTCTGGATGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: WKLLERCDSRCSGVLERASRAPE*GLDARP
Trigger: TGGGCGTGCATCCAGACCCCACTCCGGAGCACGACT...CGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAAGGGAGGCCTGGGGTCTaGGCTTTTGATTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQGRPGV*AFDWEG
Trigger: CCCTTCCCAATCAAAAGCCCAGACCCCAGGCCTCCC...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR TCA 90 bp ACCCAGGTGCCGCTTCCTGGGCACTTCCCTCATGCTGATGGGGTAAAAGCCCTGCCCTTCTCCCCTTTCTaGGTGCCAGCTTCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: TQVPLPGHFPHADGVKALPFSPF*VPASGA
Trigger: GGCTCCGGAAGCTGGCACTCAGAAAGGGGAGAAGGG...CAGGGCTTTTACCCCATCAGCATGAGGGAAGTGCCCAGGAAGCGGCACCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp ACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCACATTGTGGGCCGCTTaGCCGTGGGCTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: TPRAWEWEAHRHPSPFPRTLWAA*PWASCR
Trigger: TCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGT...GCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR TCA 90 bp CGCGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCCCTTCAAGAACGCATTaGGGTCTGCGCCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RAPPCPSGLTSRKLLKSCPSRTH*GLRLSP
Trigger: TGGAGAAAGGCGCAGACCTCAATGCGTTCTTGAAGG...GCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441349.5
CDS-3UTR GCA 90 bp GCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACGCAGGCATGCAAGCTTaGCCCATTGGGCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: AHRHPSPFPRHPQRELPHAGMQA*PIGRRS
Trigger: ACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGC...GTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GGCCTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGAGAGAGTGGCCTGGGTaGAGCTTGCCGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLGSGLLIGKGDSSSLGVREWPG*SLPWSH
Trigger: GTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCT...CACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCGCGGTGGCCCGGGCTTaGTTGGTATTGGAGACCAGA +
Preference number: 4 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCAVARA*LVLETR
Trigger: TCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGC...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCGCTGCGATTCCCGTTaGTCTGGGGTCTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCRCDSR*SGVLER
Trigger: CCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCG...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCGGCTGTGGAATGCATTaGAGGCGTGCATCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LLELGSGKPIGTPPPFLAGCGMH*RRASTE
Trigger: CTCTGTGGATGCACGCCTGCAATGCATTCCACAGCC...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACCGTGGGCTGTGGAATaGATTGCAGGCGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQPWAVE*IAGVHP
Trigger: TGGATGCACGCCTGCAATGCATTCCACAGCCCACGG...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACCCCAGGCGGATGCCCTaGGAGTGGCTGATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHPRRMP*EWLIWV
Trigger: CACCCAGATCAGCCACTCGCAGGGCATCCGCCTGGG...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAAAAGCTGCTGAAGTCGTaGTCCGGAGTGGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQKLLKS*SGVGSG
Trigger: TCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTT...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCCACGTGGGTACAGCATaGGCAGCAGCACCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GRVTPRAWEWEAHRHPSPHVGTA*AAAPQK
Trigger: CTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGTG...GGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCACCCTTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCCACGTGGGTACAGCATaGGCAGCAGCACCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LLELGSGKPIGTPPPFLAHVGTA*AAAPQK
Trigger: CTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGTG...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGCCGCGTCAGTCCAGGTaGCCTTCAAGGAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: GSGKPIGTPPPFLATHNVPRQSR*PSRRLC
Trigger: ACAAAGTCTCCTTGAAGGCCACCTGGACTGACGCGG...CACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp TCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCAACTCCTTGCTGGGGCTaGGGTCAGCGCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SNVSRRFMARVSVQKVLSTPCWG*GQRGAG
Trigger: CCCCGCCCCGCGCTGACCCCAGCCCCAGCAAGGAGT...TGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CCA 90 bp GGCCTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGCTCCCGATCGCCGTCTaGTCGATTGCCGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GLGSGLLIGKGDSSSLGVLPIAV*SIAVWS
Trigger: CGACCAGACGGCAATCGACCAGACGGCGATCGGGAG...CACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp GTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGGATGCCCTGCGAGTGGCTATTTCCCTGAGGCTCTaGTTCAGACAGAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: VLRSGVWMHAQADALRVAISLRL*FRQNRS
Trigger: GCTGCGATTCTGTCTGAACCAGAGCCTCAGGGAAAT...AGCCACTCGCAGGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp TGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGCAAGCTTGCCCCATTaGGCGGCGAAGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: WKLLERCDSRCSGVLERAASLPH*AAKWMA
Trigger: TGCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGC...CGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCAGGTGCAGGGGTGTCTaGCTATTGTTGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLELGSGKPIGTPPPFLARCRGV*LLLVSR
Trigger: CCTGCTGACCAACAATAGCCAGACACCCCTGCACCT...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp TCCAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGGTGGTGTTGTCCCTGTaGATGACGAGGTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SRKLLKSCSGVGSGCTPRVVLSL*MTRCRG
Trigger: ACCCCTGCACCTCGTCATCCACAGGGACAACACCAC...CCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACCTTGGGCATGGACGTTaGCGCCACTCTGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: AHRHPSPFPRHPQRELPHLGHGR*RHSAPG
Trigger: TCCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAG...GTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp GGCCTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGGACCAGAGAGTGGCCTaGGTGCAGCTTGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: GLGSGLLIGKGDSSSLGVDQRVA*VQLAVE
Trigger: CTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTC...CACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp GGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTCTTGGAGAGGGCGGTaGCCCGGGCTTGCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: GTPPPFLATHNVNCHTSASWRGR*PGLAWY
Trigger: ATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGA...GGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp TGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGTCTTGGAGAGGGCGGTaGCCCGGGCTTGCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: WKLLERCDSRCSGVLERASWRGR*PGLAWY
Trigger: ATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGA...CGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCAGTTGCTCTGGGGTCTTaGAGAGGGCGGTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PGAPSFCMAIHVGTACAAVALGS*RGRWPG
Trigger: CCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAAC...TGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp ACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCATCTCCGTGGGCTGTaGAATGCATTGCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: TPRAWEWEAHRHPSPFPRHLRGL*NALQAC
Trigger: GCACGCCTGCAATGCATTCCACAGCCCACGGAGATG...GCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCGCTTGGGCATCTCCGTaGGCTGTGGAATGCATTGCA +
Preference number: 4 (lower is better)
Translates to: RTAVPIRPHLQEAAEVVLAWASP*AVECIA
Trigger: TGCAATGCATTCCACAGCCCACGGAGATGCCCAAGC...GAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACCGGATGCCCTGCGAGTaGCTGATCTGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHRMPCE*LIWVVG
Trigger: CCCCACCACCCAGATCAGCCACTCGCAGGGCATCCG...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCTCCGGAGTGGGGTCTaGATGCACGCCCAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: HPSPFPRHPQRELPHFSLLRSGV*MHAQAD
Trigger: ATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAG...AAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp TGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGAGTCGTGCTCCGGAGTaGGGTCTGGATGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: WEAHRHPSPFPRHPQRELSRAPE*GLDARP
Trigger: TGGGCGTGCATCCAGACCCCACTCCGGAGCACGACT...CAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGGTATGGCCATACACGTaGGTACAGCATGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSGKPIGTPPPFLATHNVVWPYT*VQHAQQ
Trigger: CTGCTGCGCATGCTGTACCCACGTGTATGGCCATAC...CACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCTGTCACGCAGGTTCATaGCCAGAGTGTCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LLELGSGKPIGTPPPFLACHAGS*PECRSR
Trigger: TCTGGACCGACACTCTGGCCATGAACCTGCGTGACA...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACGTGGGGAGGGCAGGGTaGGGAGTCCTTGATGAGATC +
Preference number: 4 (lower is better)
Translates to: AHRHPSPFPRHPQRELPHVGRAG*GVLDEI
Trigger: GATCTCATCAAGGACTCCCCACCCTGCCCTCCCCAC...GTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTCCTCGAGCTTGGGAGTaGGAAGCCCATAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: PIGTPPPFLATHNVNCHTPRAWE*EAHRHP
Trigger: GGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGG...AGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp TGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCTCGAGCTTGGGAGTaGGAAGCCCATAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: WEAHRHPSPFPRHPQRELPRAWE*EAHRHP
Trigger: GGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGG...CAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
3UTR CAA 72 bp CGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTaGTCACCCAGGTGCCGCTTCCTGGGCACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RRFMARVSVQKV*SPRCRFLGTSL
Trigger: GAGGGAAGTGCCCAGGAAGCGGCACCTGGGTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCCCCTTCTCCCCTTTCTaGGTGCCAGCTTCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFPFSPF*VPASGA
Trigger: GGCTCCGGAAGCTGGCACTCAGAAAGGGGAGAAGGG...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR TCA 90 bp CCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCCCTCCAGGAAGCTGCTaGAGTCGTGCTCCGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PWGTFILYGHTRGYSMRSPPGSC*SRAPEW
Trigger: CCACTCCGGAGCACGACTTCAGCAGCTTCCTGGAGG...GCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp AAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACGCAGCCATTCCACGTTaGCCACAGCCGCTGCGAACA +
Preference number: 4 (lower is better)
Translates to: KPIGTPPPFLATHNVNCHAAIPR*PQPLRT
Trigger: TGTTCGCAGCGGCTGTGGGCAACGTGGAATGGCTGC...GTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCCCAGCAGGTAGTAGATaGAGGGGAGGGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFPAGSR*RGGPRW
Trigger: CCACCGTGGCCCTCCCCTGCATCTACTACCTGCTGG...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAAACGTTGGCGCCACTCTaGACCAGGACCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: EWEAHRHPSPFPRHPQRETLAPL*TRTFTQ
Trigger: CTGTGTGAAGGTCCTGGTGCAGAGTGGCGCCAACGT...TTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp CACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTAGAGAGTGGCCTGGGTaGAGCTTGCCGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HPSPFPRHPQRELPHFSLREWPG*SLPWSH
Trigger: GTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCT...AAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GCATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCGCTGCGATTCCCGTTaGTCTGGGGTCTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALQACIHRGVEAPGTLRFRCDSR*SGVLER
Trigger: CCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCG...GAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp TGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGAAGCTGCTGAAGTCGTaGTCCGGAGTGGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: WKLLERCDSRCSGVLERAKLLKS*SGVGSG
Trigger: TCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTT...CGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCACACGTGGGTACAGCATaGGCAGCAGCACCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: ALGSWRGRWPGLAWYWRPHVGTA*AAAPQK
Trigger: CTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGTG...TGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCCAGCCTTCACTGGGCTaGCTCAGGGGGAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: PWGTFILYGHTRGYSMRSQPSLG*LRGRGS
Trigger: GCTACCTCTCCCCCTGAGGCAGCCCAGTGAAGGCTG...GCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCAGCCTTCACTGGGCTaGCTCAGGGGGAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: HPSPFPRHPQRELPHFSLQPSLG*LRGRGS
Trigger: GCTACCTCTCCCCCTGAGGCAGCCCAGTGAAGGCTG...AAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCTGAGCTCCCGATCGCCGTCTaGTCGATTGCCGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: VAWVQLAVEPLSDSSFSELPIAV*SIAVWS
Trigger: CGACCAGACGGCAATCGACCAGACGGCGATCGGGAG...CTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp TGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGGCAAGCTTGCCCCATTaGGCGGCGAAGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: WEAHRHPSPFPRHPQRELASLPH*AAKWMA
Trigger: TGCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGC...CAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAAAGGTGCAGGGGTGTCTaGCTATTGTTGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQRCRGV*LLLVSR
Trigger: CCTGCTGACCAACAATAGCCAGACACCCCTGCACCT...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp TCCAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGAGGTGCAGGGGTGTCTaGCTATTGTTGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRKLLKSCSGVGSGCTPRRCRGV*LLLVSR
Trigger: CCTGCTGACCAACAATAGCCAGACACCCCTGCACCT...CCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCGTGGTGTTGTCCCTGTaGATGACGAGGTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCVVLSL*MTRCRG
Trigger: ACCCCTGCACCTCGTCATCCACAGGGACAACACCAC...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCCAGGTGCAGGGGCGTaGAGCCGTTGCATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: HPSPFPRHPQRELPHFSLPGAGA*SRCMSE
Trigger: CTCAGACATGCAACGGCTCCACGCCCCTGCACCTGG...AAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp TGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCTTGGGCATGGACGTTaGCGCCACTCTGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: WEAHRHPSPFPRHPQRELLGHGR*RHSAPG
Trigger: TCCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAG...CAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp CGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCTGGGTTTGTAGCCCATaGCATCTTGGGCATGGACGT +
Preference number: 4 (lower is better)
Translates to: RTAVPIRPHLQEAAEVVLWVCSP*HLGHGR
Trigger: ACGTCCATGCCCAAGATGCCATGGGCTACAAACCCA...GAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CCA 90 bp GTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCCAGGGACCAGAGAGTGGCCTaGGTGCAGCTTGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: VSRRFMARVSVQKVLSPRDQRVA*VQLAVE
Trigger: CTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTC...CCTGGGTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTTGGAGACCAGAGAGTaGCCTGGGTGCAGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PIGTPPPFLATHNVNCHTLETRE*PGCSLP
Trigger: CGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAA...AGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp ACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCTGGCCCGGGCTTGCTTaGTATTGGAGACCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: TPRAWEWEAHRHPSPFPRWPGLA*YWRPES
Trigger: ACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCA...GCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCAGGGGTGGAAGCTCCTaGAACGCTGCGATTCCCGTT +
Preference number: 4 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCRGGSS*NAAIPV
Trigger: AACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCT...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GCATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCGCATCCACAGAGGGGTaGAAGCTCCTGGAACGCTGC +
Preference number: 4 (lower is better)
Translates to: ALQACIHRGVEAPGTLRFASTEG*KLLERC
Trigger: GCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGC...GAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCAGCACCTCCGGAGTGGGGTCTaGATGCACGCCCAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: GHLHSVWPYTWVQHAQQHLRSGV*MHAQAD
Trigger: ATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAG...GTGCTGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GCATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCGTGGGGAGGGCAGGGTaGGGAGTCCTTGATGAGATC +
Preference number: 4 (lower is better)
Translates to: ALQACIHRGVEAPGTLRFVGRAG*GVLDEI
Trigger: GATCTCATCAAGGACTCCCCACCCTGCCCTCCCCAC...GAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCAATAACTTTATGGGTTaGTTTGTGGGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GTLRFPLLWGLGEGGGPGNNFMG*FVGRAG
Trigger: CCCTGCCCTCCCCACAAACCAACCCATAAAGTTATT...GCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp ATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATGTGACTCCTCGAGCTTaGGAGTGGGAAGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: IPVALGSWRGRWPGLAWYVTPRA*EWEAHR
Trigger: CCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCAC...ATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAAGTGACTCCTCGAGCTTaGGAGTGGGAAGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: EWEAHRHPSPFPRHPQREVTPRA*EWEAHR
Trigger: CCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCAC...TTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp TGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGGGGAGGCCTGGGGTCTaGGCTTTTGATTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: WEAHRHPSPFPRHPQRELGRPGV*AFDWEG
Trigger: CCCTTCCCAATCAAAAGCCCAGACCCCAGGCCTCCC...CAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp ACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTGGTCGGACTCCTTGCTaGGGCTGGGCTGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: TREWPGCSLPWSHFLIAAGRTPC*GWAAWT
Trigger: AGTCCAAGCAGCCCAGCCCCAGCAAGGAGTCCGACC...AGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441349.5
3UTR CAA 72 bp GATGGGCTTGGGCATCTCCGTGGGCTGTGGAATGCATaGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DGLGHLRGLWNA*QACIHRGVEAP
Trigger: AGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGCATTCCACAGCCCACGGAGATGCCCAAGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp CTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTCGAAGTGGATGGCAGTaGAGCCCTTGTCGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LGIGDQRVAWVQLAVEPLRSGWQ*SPCRRW
Trigger: CCACCGACGACAAGGGCTTCACTGCCATCCACTTCG...AAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp CTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGGGACGAAGTGGATGGCAGTaGAGCCCTTGTCGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LGSGLLIGKGDSSSLGVGRSGWQ*SPCRRW
Trigger: CCACCGACGACAAGGGCTTCACTGCCATCCACTTCG...TCCCACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR TCA 90 bp GGCCATACACGTGGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCGGAGAGTCTCTGGTGTaGTGGGGGAAAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: GHTRGYSMRSSTSKGSRGGESLV*WGKRQM
Trigger: CATTTGCCTTTTCCCCCATCACACCAGAGACTCTCC...GCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGTGTATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp GCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTCGCCACCCACAACGTaGATTGCCACACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ACIHRGVEAPGTLRFPLLSPPTT*IATLQP
Trigger: AGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGA...GAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCTCGCCACCCACAACGTaGATTGCCACACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCSPPTT*IATLQP
Trigger: AGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGA...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp AGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCATCTCCCCTTTCTGAGTaGCAGCTTCCGGAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SPGAPSFCMAIHVGTACASPLSE*QLPEPA
Trigger: GGCGGGCTCCGGAAGCTGGCACTCAGAAAGGGGAGA...TGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCAGCACCCAGCAGGTAGTAGATaGAGGGGAGGGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: GHLHSVWPYTWVQHAQQHPAGSR*RGGPRW
Trigger: CCACCGTGGCCCTCCCCTGCATCTACTACCTGCTGG...GTGCTGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCGCGGTGGCCCGGGCTTaGTTGGTATTGGAGACCAGA +
Preference number: 4 (lower is better)
Translates to: PWGTFILYGHTRGYSMRSAVARA*LVLETR
Trigger: TCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGC...GCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTAAGCTCCTGGAACGCTaGGATTCCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PIGTPPPFLATHNVNCHTKLLER*DSRCSG
Trigger: CCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTT...AGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GGCCTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGCCGTGGGCTGTGGAATaGATTGCAGGCGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: GLGSGLLIGKGDSSSLGVPWAVE*IAGVHP
Trigger: TGGATGCACGCCTGCAATGCATTCCACAGCCCACGG...CACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCGTGTTGTCACCCAGGTaGCGCTTCCTGGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFVLSPR*RFLGTS
Trigger: GGAAGTGCCCAGGAAGCGGCACCTGGGTGACAACAC...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACGTGTTGTCACCCAGGTaGCGCTTCCTGGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHVLSPR*RFLGTS
Trigger: GGAAGTGCCCAGGAAGCGGCACCTGGGTGACAACAC...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp CAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGATGAGATCGCACAGCTaGCAGGAAGGCTTCATCGAA +
Preference number: 4 (lower is better)
Translates to: QEAAEVVLRSGVWMHAQAMRSHS*QEGFIE
Trigger: TTCGATGAAGCCTTCCTGGCAGCTGTGCGATCTCAT...CGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATGTTCGCCTGCTGCATaGAGCCACTTGGAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: EWEAHRHPSPFPRHPQRECSPAA*SHLELA
Trigger: AGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACA...TTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAACCGCGTCAGTCCAGGTaGCCTTCAAGGAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: EWEAHRHPSPFPRHPQREPRQSR*PSRRLC
Trigger: ACAAAGTCTCCTTGAAGGCCACCTGGACTGACGCGG...TTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCTGGTCGATTGCCGTCTaGTCGGACTCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFWSIAV*SDSLLG
Trigger: CCCCAGCAAGGAGTCCGACCAGACGGCAATCGACCA...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GGCCTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGATGGCATCTTGGGCATaGACGTTGGCGCCACTCTGC +
Preference number: 4 (lower is better)
Translates to: GLGSGLLIGKGDSSSLGVMASWA*TLAPLC
Trigger: GCAGAGTGGCGCCAACGTCCATGCCCAAGATGCCAT...CACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCGGGTGCAGCTTGCCGTaGAGCCACTTTCTGATAGCA +
Preference number: 4 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCGCSLP*SHFLIA
Trigger: TGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCC...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCTTGGAGACCAGAGAGTaGCCTGGGTGCAGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PWGTFILYGHTRGYSMRSLETRE*PGCSLP
Trigger: CGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAA...GCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCGGGCTTGCTTGGTATTaGAGACCAGAGAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCGLAWY*RPESGL
Trigger: CAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCC...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTTCTTGGAGAGGGCGGTaGCCCGGGCTTGCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: HPSPFPRHPQRELPHFSLSWRGR*PGLAWY
Trigger: ATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGA...AAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp TCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCAGTTGCTCTGGGGTCTTaGAGAGGGCGGTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SNVSRRFMARVSVQKVLSVALGS*RGRWPG
Trigger: CCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAAC...TGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCGATTCCCGTTGCTCTaGGGTCTTGGAGAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: HPSPFPRHPQRELPHFSLRFPLL*GLGEGG
Trigger: ACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCG...AAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAGCATCCACAGAGGGGTaGAAGCTCCTGGAACGCTGC +
Preference number: 4 (lower is better)
Translates to: LGSGLLIGKGDSSSLGVGASTEG*KLLERC
Trigger: GCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGC...TCCCACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp GAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAAGCTTGGGCATCTCCGTaGGCTGTGGAATGCATTGCA +
Preference number: 4 (lower is better)
Translates to: EWEAHRHPSPFPRHPQREAWASP*AVECIA
Trigger: TGCAATGCATTCCACAGCCCACGGAGATGCCCAAGC...TTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCGGATGCCCTGCGAGTaGCTGATCTGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RMCHAGSWPECRSRRCCHRMPCE*LIWVVG
Trigger: CCCCACCACCCAGATCAGCCACTCGCAGGGCATCCG...GTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACGTGGGGAGGGCAGGGTaGGGAGTCCTTGATGAGATC +
Preference number: 4 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHVGRAG*GVLDEI
Trigger: GATCTCATCAAGGACTCCCCACCCTGCCCTCCCCAC...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GCATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCTTATGGGTTGGTTTGTaGGGAGGGCAGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ALQACIHRGVEAPGTLRFLWVGL*GGQGGE
Trigger: CTCCCCACCCTGCCCTCCCCACAAACCAACCCATAA...GAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGCCTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGTTATGGGTTGGTTTGTaGGGAGGGCAGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLGSGLLIGKGDSSSLGVLWVGL*GGQGGE
Trigger: CTCCCCACCCTGCCCTCCCCACAAACCAACCCATAA...CACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR TCA 90 bp CACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTTGTTGTCCCTGTGGATaGCGAGGTGCAGGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: HPSPFPRHPQRELPHFSLCCPCG*RGAGVS
Trigger: AGACACCCCTGCACCTCGTCATCCACAGGGACAACA...AAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR TCA 90 bp GCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGCATGTCTGAGCATTaGGGTCTGCGCCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ACIHRGVEAPGTLRFPLLCMSEH*GLRLSP
Trigger: TGGAGAAAGGCGCAGACCTCAATGCTCAGACATGCA...GAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR TCA 90 bp GTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCTGAGACATTGTGGGCCGCTTaGCCGTGGGCTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: VAWVQLAVEPLSDSSFSETLWAA*PWASCR
Trigger: TCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGT...CTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp AACATTCCACATTGTGGGCCGCTTGACCGTGGGCTTCCTGTAGATGGGCTTGGGGCAGGCATGCAAGCTTaGCCCATTGGGCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: NIPHCGPLDRGLPVDGLGAGMQA*PIGRRS
Trigger: ACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGC...CCCAAGCCCATCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGTGGAATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp ATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATAATGCATTGCAGGCGTaGATCCACAGAGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: IPVALGSWRGRWPGLAWYNALQA*IHRGVE
Trigger: TTCCACCCCTCTGTGGATGCACGCCTGCAATGCATT...ATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp TGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGGGCTGTGGAATGCATTaGAGGCGTGCATCCACAGAG +
Preference number: 4 (lower is better)
Translates to: WEAHRHPSPFPRHPQRELGCGMH*RRASTE
Trigger: CTCTGTGGATGCACGCCTGCAATGCATTCCACAGCC...CAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCTGAGCCGTGGGCTGTGGAATaGATTGCAGGCGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: VAWVQLAVEPLSDSSFSEPWAVE*IAGVHP
Trigger: TGGATGCACGCCTGCAATGCATTCCACAGCCCACGG...CTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCAGCCTTCACTGGGCTaGCTCAGGGGGAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: RMCHAGSWPECRSRRCCHQPSLG*LRGRGS
Trigger: GCTACCTCTCCCCCTGAGGCAGCCCAGTGAAGGCTG...GTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCACCCACAACGTGAATTaGCACACTTCAGCCTTCACT +
Preference number: 4 (lower is better)
Translates to: GRVTPRAWEWEAHRHPSPTHNVN*HTSAFT
Trigger: AGTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGT...GGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCACCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGACCCACAACGTGAATTaGCACACTTCAGCCTTCACT +
Preference number: 4 (lower is better)
Translates to: GSGKPIGTPPPFLATHNVTHNVN*HTSAFT
Trigger: AGTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGT...CACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCAGCACTGGTCGATTGCCGTCTaGTCGGACTCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GHLHSVWPYTWVQHAQQHWSIAV*SDSLLG
Trigger: CCCCAGCAAGGAGTCCGACCAGACGGCAATCGACCA...GTGCTGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCGTGTCTGGCTATTGTTaGTCAGCAGGTCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: GTPPPFLATHNVNCHTSAVSGYC*SAGPRE
Trigger: TTCCCGTGGACCTGCTGACCAACAATAGCCAGACAC...GGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACGTGGTGTTGTCCCTGTaGATGACGAGGTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHVVLSL*MTRCRG
Trigger: ACCCCTGCACCTCGTCATCCACAGGGACAACACCAC...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTGGGTTTGTAGCCCATaGCATCTTGGGCATGGACGT +
Preference number: 4 (lower is better)
Translates to: GTPPPFLATHNVNCHTSAWVCSP*HLGHGR
Trigger: ACGTCCATGCCCAAGATGCCATGGGCTACAAACCCA...GGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp CCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTGGGTGCAGCTTGCCGTaGAGCCACTTTCTGATAGCA +
Preference number: 4 (lower is better)
Translates to: PIGTPPPFLATHNVNCHTGCSLP*SHFLIA
Trigger: TGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCC...AGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp ACCCAGGTGCCGCTTCCTGGGCACTTCCCTCATGCTGATGGGGTAAAAGCCCTGGGGCTTGCTTGGTATTaGAGACCAGAGAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TQVPLPGHFPHADGVKALGLAWY*RPESGL
Trigger: CAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCC...CAGGGCTTTTACCCCATCAGCATGAGGGAAGTGCCCAGGAAGCGGCACCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTAGGGGTGGAAGCTCCTaGAACGCTGCGATTCCCGTT +
Preference number: 4 (lower is better)
Translates to: HPSPFPRHPQRELPHFSLRGGSS*NAAIPV
Trigger: AACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCT...AAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp ACCCAGGTGCCGCTTCCTGGGCACTTCCCTCATGCTGATGGGGTAAAAGCCCTGTGTCACGCAGGTTCATaGCCAGAGTGTCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: TQVPLPGHFPHADGVKALCHAGS*PECRSR
Trigger: TCTGGACCGACACTCTGGCCATGAACCTGCGTGACA...CAGGGCTTTTACCCCATCAGCATGAGGGAAGTGCCCAGGAAGCGGCACCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTTATGGGTTGGTTTGTaGGGAGGGCAGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LGIGDQRVAWVQLAVEPLLWVGL*GGQGGE
Trigger: CTCCCCACCCTGCCCTCCCCACAAACCAACCCATAA...AAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp TGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGTGCATGTCTGAGCATTaGGGTCTGCGCCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WEAHRHPSPFPRHPQRELCMSEH*GLRLSP
Trigger: TGGAGAAAGGCGCAGACCTCAATGCTCAGACATGCA...CAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR TCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCTGGGGTCTGGGCTTTTaGTTGGGAAGGGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFWGLGF*LGRVTP
Trigger: AGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCA...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp TTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTCCGCTAGGGTTCGGCTaGCTCTCTAGCTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FIECVTQVHGQSVGPEGVPLGFG*LSSWRG
Trigger: GCCCCTCCAGCTAGAGAGGCAGCCGAACCCTAGCGG...AACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp ACCCAGGTGCCGCTTCCTGGGCACTTCCCTCATGCTGATGGGGTAAAAGCCCTGGAGACTTTGTTCGCCTaGTGCATGGAGCCACTTGGA +
Preference number: 4 (lower is better)
Translates to: TQVPLPGHFPHADGVKALETLFA*CMEPLG
Trigger: TCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTC...CAGGGCTTTTACCCCATCAGCATGAGGGAAGTGCCCAGGAAGCGGCACCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp AAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACCTGAGCATTGAGGTCTaGGCCTTTCTCCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: KPIGTPPPFLATHNVNCHLSIEV*AFLQQV
Trigger: TACCTGCTGGAGAAAGGCGCAGACCTCAATGCTCAG...GTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR GCA 90 bp CGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACGCGGTGGCCCGGGCTTaGTTGGTATTGGAGACCAGA +
Preference number: 4 (lower is better)
Translates to: RMCHAGSWPECRSRRCCHAVARA*LVLETR
Trigger: TCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGC...GTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp AAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACAATGCATTGCAGGCGTaGATCCACAGAGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: KPIGTPPPFLATHNVNCHNALQA*IHRGVE
Trigger: TTCCACCCCTCTGTGGATGCACGCCTGCAATGCATT...GTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp ACCCAGGTGCCGCTTCCTGGGCACTTCCCTCATGCTGATGGGGTAAAAGCCCTGAATGCATTGCAGGCGTaGATCCACAGAGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TQVPLPGHFPHADGVKALNALQA*IHRGVE
Trigger: TTCCACCCCTCTGTGGATGCACGCCTGCAATGCATT...CAGGGCTTTTACCCCATCAGCATGAGGGAAGTGCCCAGGAAGCGGCACCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCATGAGATCGCACAGCTaGCAGGAAGGCTTCATCGAA +
Preference number: 4 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCMRSHS*QEGFIE
Trigger: TTCGATGAAGCCTTCCTGGCAGCTGTGCGATCTCAT...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCTGTTCGCCTGCTGCATaGAGCCACTTGGAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: PWGTFILYGHTRGYSMRSCSPAA*SHLELA
Trigger: AGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACA...GCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACGGGTGCAGCTTGCCGTaGAGCCACTTTCTGATAGCA +
Preference number: 4 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHGCSLP*SHFLIA
Trigger: TGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCC...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CTTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTGACCAGAGAGTGGCCTaGGTGCAGCTTGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: LHRMCHAGSWPECRSRRCDQRVA*VQLAVE
Trigger: CTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTC...ACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCAGCACATCTCCGTGGGCTGTaGAATGCATTGCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: GAPSFCMAIHVGTACAAAHLRGL*NALQAC
Trigger: GCACGCCTGCAATGCATTCCACAGCCCACGGAGATG...TGCTGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTGCTTGGGCATCTCCGTaGGCTGTGGAATGCATTGCA +
Preference number: 4 (lower is better)
Translates to: LGIGDQRVAWVQLAVEPLAWASP*AVECIA
Trigger: TGCAATGCATTCCACAGCCCACGGAGATGCCCAAGC...AAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCATCCTGTAGATGGGCTTaGGCATCTCCGTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PGAPSFCMAIHVGTACAASCRWA*ASPWAV
Trigger: CACAGCCCACGGAGATGCCCAAGCCCATCTACAGGA...TGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCTGAGGTATGGCCATACACGTaGGTACAGCATGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VAWVQLAVEPLSDSSFSEVWPYT*VQHAQQ
Trigger: CTGCTGCGCATGCTGTACCCACGTGTATGGCCATAC...CTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCGTATGGCCATACACGTaGGTACAGCATGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFVWPYT*VQHAQQ
Trigger: CTGCTGCGCATGCTGTACCCACGTGTATGGCCATAC...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAAAATAACTTTATGGGTTaGTTTGTGGGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQNNFMG*FVGRAG
Trigger: CCCTGCCCTCCCCACAAACCAACCCATAAAGTTATT...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR TCA 90 bp CTTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTCGAAGTGGATGGCAGTaGAGCCCTTGTCGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LHRMCHAGSWPECRSRRCRSGWQ*SPCRRW
Trigger: CCACCGACGACAAGGGCTTCACTGCCATCCACTTCG...ACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp CCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCGGAGAGTCTCTGGTGTaGTGGGGGAAAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: PWGTFILYGHTRGYSMRSGESLV*WGKRQM
Trigger: CATTTGCCTTTTCCCCCATCACACCAGAGACTCTCC...GCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GTTGTTGCTAACATTCCACATTGTGGGCCGCTTGACCGTGGGCTTCCTGTAGATTCTCCCCTTTCTGAGTaGCAGCTTCCGGAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VVANIPHCGPLDRGLPVDSPLSE*QLPEPA
Trigger: GGCGGGCTCCGGAAGCTGGCACTCAGAAAGGGGAGA...ATCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGTGGAATGTTAGCAACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp TGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGACTTTGTTCGCCTGCTaGATGGAGCCACTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: WEAHRHPSPFPRHPQRELTLFAC*MEPLGV
Trigger: AACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGT...CAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCGAGACTTTGTTCGCCTaGTGCATGGAGCCACTTGGA +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFETLFA*CMEPLG
Trigger: TCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTC...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp TCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACAGGACCTGCAGGCATaGAAGCTTGCCCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: SNVSRRFMARVSVQKVLSQDLQA*KLAPLG
Trigger: GCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTG...TGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp AAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACATGAGATCGCACAGCTaGCAGGAAGGCTTCATCGAA +
Preference number: 4 (lower is better)
Translates to: KPIGTPPPFLATHNVNCHMRSHS*QEGFIE
Trigger: TTCGATGAAGCCTTCCTGGCAGCTGTGCGATCTCAT...GTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp ATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATACCCACAACGTGAATTaGCACACTTCAGCCTTCACT +
Preference number: 4 (lower is better)
Translates to: IPVALGSWRGRWPGLAWYTHNVN*HTSAFT
Trigger: AGTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGT...ATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCTGAGGTGTCTGGCTATTGTTaGTCAGCAGGTCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: VAWVQLAVEPLSDSSFSEVSGYC*SAGPRE
Trigger: TTCCCGTGGACCTGCTGACCAACAATAGCCAGACAC...CTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACCGGGCACAGGCACGGTaGTTCCATATTTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHRAQAR*FHILQK
Trigger: CTTCTGCAAAATATGGAACCACCGTGCCTGTGCCCG...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCCGGGCACAGGCACGGTaGTTCCATATTTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFRAQAR*FHILQK
Trigger: CTTCTGCAAAATATGGAACCACCGTGCCTGTGCCCG...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp TCCAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGTCCATGAGGGTCAGCTaGCTCTTGAACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: SRKLLKSCSGVGSGCTPRSMRVS*LLNIFI
Trigger: AATGAAGATGTTCAAGAGCCAGCTGACCCTCATGGA...CCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCAGCACTGGCCCGGGCTTGCTTaGTATTGGAGACCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: GHLHSVWPYTWVQHAQQHWPGLA*YWRPES
Trigger: ACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCA...GTGCTGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCCACCTTCATTCTGTATaGCCATACACGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: GTPPPFLATHNVNCHTSAHLHSV*PYTWVQ
Trigger: CTGTACCCACGTGTATGGCCATACAGAATGAAGGTG...GGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCAATAACTTTATGGGTTaGTTTGTGGGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ACIHRGVEAPGTLRFPLLNNFMG*FVGRAG
Trigger: CCCTGCCCTCCCCACAAACCAACCCATAAAGTTATT...GAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp CTTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTCGGTGGGGATTTCCCTaGGGCTCTGGTTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LHRMCHAGSWPECRSRRCRWGFP*GSGSDR
Trigger: TCTGTCTGAACCAGAGCCTCAGGGAAATCCCCACCG...ACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACTTTGTTCGCCTGCTaGATGGAGCCACTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFTLFAC*MEPLGV
Trigger: AACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGT...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp GGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCAGCACGAGACTTTGTTCGCCTaGTGCATGGAGCCACTTGGA +
Preference number: 4 (lower is better)
Translates to: GHLHSVWPYTWVQHAQQHETLFA*CMEPLG
Trigger: TCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTC...GTGCTGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CTTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTACGTTGGCGCCACTCTaGACCAGGACCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: LHRMCHAGSWPECRSRRCTLAPL*TRTFTQ
Trigger: CTGTGTGAAGGTCCTGGTGCAGAGTGGCGCCAACGT...ACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR GCA 90 bp AAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGAGTAGAGAAATGTCCTaGCATAGGAGAGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: KLLERCDSRCSGVLERAVSREMS*HRRVSG
Trigger: ACCAGAGACTCTCCTATGGCAGGACATTTCTCTACT...CACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp AGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGAACGCATTGAGGTCTaGGCCTTTCTCCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: SPGAPSFCMAIHVGTACAERIEV*AFLQQV
Trigger: TACCTGCTGGAGAAAGGCGCAGACCTCAATGCGTTC...TGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441349.5
CDS-3UTR CCA 90 bp CTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAATTTCCCTGAGGCTCTaGTTCAGACAGAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: LGSGLLIGKGDSSSLGVGISLRL*FRQNRS
Trigger: GCTGCGATTCTGTCTGAACCAGAGCCTCAGGGAAAT...TCCCACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp CTTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTCCTGTAGATGGGCTTaGGCATCTCCGTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LHRMCHAGSWPECRSRRCSCRWA*ASPWAV
Trigger: CACAGCCCACGGAGATGCCCAAGCCCATCTACAGGA...ACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp ATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATGCCATAATAACTTTATaGGTTGGTTTGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: IPVALGSWRGRWPGLAWYAIITL*VGLWGG
Trigger: CCCTCCCCACAAACCAACCCATAAAGTTATTATGGC...ATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
3UTR CAA 72 bp TTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTaGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LVLETREWPGCS*PWSHFLIAASL
Trigger: CAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR TCA 90 bp TTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTTGTTGTCCCTGTGGATaGCGAGGTGCAGGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: FIECVTQVHGQSVGPEGVCCPCG*RGAGVS
Trigger: AGACACCCCTGCACCTCGTCATCCACAGGGACAACA...AACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp CGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCTGAGCATTGAGGTCTaGGCCTTTCTCCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RMCHAGSWPECRSRRCCHLSIEV*AFLQQV
Trigger: TACCTGCTGGAGAAAGGCGCAGACCTCAATGCTCAG...GTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR GCA 90 bp ACCCAGGTGCCGCTTCCTGGGCACTTCCCTCATGCTGATGGGGTAAAAGCCCTGAGTAGAGAAATGTCCTaGCATAGGAGAGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TQVPLPGHFPHADGVKALSREMS*HRRVSG
Trigger: ACCAGAGACTCTCCTATGGCAGGACATTTCTCTACT...CAGGGCTTTTACCCCATCAGCATGAGGGAAGTGCCCAGGAAGCGGCACCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp GTAAAAGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATAAGCTCCTGGAACGCTaGGATTCCCGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VKALGHLHSVWPYTWVQHKLLER*DSRCSG
Trigger: CCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTT...ATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCTTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp TTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTATGGCATCTTGGGCATaGACGTTGGCGCCACTCTGC +
Preference number: 4 (lower is better)
Translates to: FIECVTQVHGQSVGPEGVMASWA*TLAPLC
Trigger: GCAGAGTGGCGCCAACGTCCATGCCCAAGATGCCAT...AACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CCA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCTTTTGCAGAAGTCAATaGGTTTGTAGCCCATGGCAT +
Preference number: 4 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCFCRSQ*VCSPWH
Trigger: ATGCCATGGGCTACAAACCCATTGACTTCTGCAAAA...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp CTTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGGCCCGGGCTTGCTTaGTATTGGAGACCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LHRMCHAGSWPECRSRRCWPGLA*YWRPES
Trigger: ACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCA...ACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp TCAGGGGGAGAGGTAGCCATAATAACTTTATGGGTTGGTTTGTGGGGAGGGCAGCATCTCCGTGGGCTGTaGAATGCATTGCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SGGEVAIITLWVGLWGGQHLRGL*NALQAC
Trigger: GCACGCCTGCAATGCATTCCACAGCCCACGGAGATG...CTGCCCTCCCCACAAACCAACCCATAAAGTTATTATGGCTACCTCTCCCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCATGGGAAGTGCACACTaGATCCTTGACCTTGATACT +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFMGSAH*ILDLDT
Trigger: AGTATCAAGGTCAAGGATGCAGTGTGCACTTCCCAT...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp TTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTCCGCGTCAGTCCAGGTaGCCTTCAAGGAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: FIECVTQVHGQSVGPEGVPRQSR*PSRRLC
Trigger: ACAAAGTCTCCTTGAAGGCCACCTGGACTGACGCGG...AACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACTCCATGAGGGTCAGCTaGCTCTTGAACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHSMRVS*LLNIFI
Trigger: AATGAAGATGTTCAAGAGCCAGCTGACCCTCATGGA...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp GTTGTTGCTAACATTCCACATTGTGGGCCGCTTGACCGTGGGCTTCCTGTAGATTGTCACGCAGGTTCATaGCCAGAGTGTCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VVANIPHCGPLDRGLPVDCHAGS*PECRSR
Trigger: TCTGGACCGACACTCTGGCCATGAACCTGCGTGACA...ATCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGTGGAATGTTAGCAACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCGCCATAATAACTTTATaGGTTGGTTTGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFAIITL*VGLWGG
Trigger: CCCTCCCCACAAACCAACCCATAAAGTTATTATGGC...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CCA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACGCCATAATAACTTTATaGGTTGGTTTGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHAIITL*VGLWGG
Trigger: CCCTCCCCACAAACCAACCCATAAAGTTATTATGGC...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR GCA 90 bp TCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGACTTTGTTCGCCTGCTaGATGGAGCCACTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SSNVSRRFMARVSVQKVLTLFAC*MEPLGV
Trigger: AACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGT...CAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp AAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACGGTGGTTCCATATTTTaGAGAAGTCAATGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: KPIGTPPPFLATHNVNCHGGSIF*RSQWVC
Trigger: ACAAACCCATTGACTTCTGCAAAATATGGAACCACC...GTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp ATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCATTTCCCTGAGGCTCTaGTTCAGACAGAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: IECVTQVHGQSVGPEGVVISLRL*FRQNRS
Trigger: GCTGCGATTCTGTCTGAACCAGAGCCTCAGGGAAAT...GACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GTAAAAGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGTGTCTGGCTATTGTTaGTCAGCAGGTCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: VKALGHLHSVWPYTWVQHVSGYC*SAGPRE
Trigger: TTCCCGTGGACCTGCTGACCAACAATAGCCAGACAC...ATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCTTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp CTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGGGATTTTGCAGAAGTCAATaGGTTTGTAGCCCATGGCAT +
Preference number: 4 (lower is better)
Translates to: LGSGLLIGKGDSSSLGVGFCRSQ*VCSPWH
Trigger: ATGCCATGGGCTACAAACCCATTGACTTCTGCAAAA...TCCCACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CCA 90 bp CTTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTCACCTTCATTCTGTATaGCCATACACGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: LHRMCHAGSWPECRSRRCHLHSV*PYTWVQ
Trigger: CTGTACCCACGTGTATGGCCATACAGAATGAAGGTG...ACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR GCA 90 bp AGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGGTGGTTCCATATTTTaGAGAAGTCAATGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SPGAPSFCMAIHVGTACAGGSIF*RSQWVC
Trigger: ACAAACCCATTGACTTCTGCAAAATATGGAACCACC...TGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR GCA 90 bp TCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCAATGGGAAGTGCACACTaGATCCTTGACCTTGATACT +
Preference number: 4 (lower is better)
Translates to: SNVSRRFMARVSVQKVLSMGSAH*ILDLDT
Trigger: AGTATCAAGGTCAAGGATGCAGTGTGCACTTCCCAT...TGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp GTTGTTGCTAACATTCCACATTGTGGGCCGCTTGACCGTGGGCTTCCTGTAGATCACCTTCATTCTGTATaGCCATACACGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: VVANIPHCGPLDRGLPVDHLHSV*PYTWVQ
Trigger: CTGTACCCACGTGTATGGCCATACAGAATGAAGGTG...ATCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGTGGAATGTTAGCAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CCA 90 bp TCAGGGGGAGAGGTAGCCATAATAACTTTATGGGTTGGTTTGTGGGGAGGGCAGTCCATGAGGGTCAGCTaGCTCTTGAACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: SGGEVAIITLWVGLWGGQSMRVS*LLNIFI
Trigger: AATGAAGATGTTCAAGAGCCAGCTGACCCTCATGGA...CTGCCCTCCCCACAAACCAACCCATAAAGTTATTATGGCTACCTCTCCCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS CCA 90 bp AGCCCGCCCGCCGAGCGGTGCTGCCCGCGGAGGCCATCGCGGGGCTaGAACTCGGACCCGGGCCGGGCGGGCTACTCACACACCCGCCGG +
Preference number: 5 (lower is better)
Translates to: SPPAERCCPRRPSRG*NSDPGRAGYSHTRR
Trigger: CCGGCGGGTGTGTGAGTAGCCCGCCCGGCCCGGGTCCGAGTTCCAGCCCCGCGATGGCCTCCGCGGGCAGCACCGCTCGGCGGGCGGGCT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000441349.5
ENST00000457410.5
CDS GCA 90 bp CCCTTTCTGAGTGCCAGCTTCCGGAGCCCGCCCGCCGAGCGGTGCTaGCCGCGGAGGCCATCGCGGGGCTGGAACTCGGACCCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: PFLSASFRSPPAERC*PRRPSRGWNSDPGR
Trigger: CCGGCCCGGGTCCGAGTTCCAGCCCCGCGATGGCCTCCGCGGGCAGCACCGCTCGGCGGGCGGGCTCCGGAAGCTGGCACTCAGAAAGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000441349.5
ENST00000457410.5
CDS GCA 90 bp CTCCCCTTTCTGAGTGCCAGCTTCCGGAGCCCGCCCGCCGAGCGGTaGTGCCCGCGGAGGCCATCGCGGGGCTGGAACTCGGACCCGGGC +
Preference number: 5 (lower is better)
Translates to: LPFLSASFRSPPAER*CPRRPSRGWNSDPG
Trigger: GCCCGGGTCCGAGTTCCAGCCCCGCGATGGCCTCCGCGGGCAGCACCGCTCGGCGGGCGGGCTCCGGAAGCTGGCACTCAGAAAGGGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000441349.5
ENST00000457410.5
CDS-3UTR CAA 90 bp TGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCCACCCAGTGGCCGTCCCGGGGGCCACTCCTaGCCAGCTGGCCGCGGTTTC +
Preference number: 5 (lower is better)
Translates to: CAAAPQKAAAARAPPSGRPGGHS*PAGRGF
Trigger: GAAACCGCGGCCAGCTGGCAAGGAGTGGCCCCCGGG...ACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS TCA 90 bp ACTTGGAGTTGGCTGCGGCCGAGCACCTCTCCCTTCTCCCCTTTCTaGGTGCCAGCTTCCGGAGCCCGCCCGCCGAGCGGTGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: TWSWLRPSTSPFSPF*VPASGARPPSGAAR
Trigger: GCGGGCAGCACCGCTCGGCGGGCGGGCTCCGGAAGCTGGCACTCAGAAAGGGGAGAAGGGAGAGGTGCTCGGCCGCAGCCAACTCCAAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS-3UTR CAA 90 bp ACGTGGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCCGTTGCTCTGGGGTCTaGGAGAGGGCGGTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: TWVQHAQQHLKRQPRHGRRCSGV*ERAVAR
Trigger: CCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACG...GCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CGCGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCCGTTGCTCTGGGGTCTaGGAGAGGGCGGTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RAPPCPSGLTSRKLLKSCRCSGV*ERAVAR
Trigger: CCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACG...GCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCGCTGCATGGAGCCACTaGGAGTTGGCTGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: RCDSRCSGVLERAVARACAAWSH*ELAAAE
Trigger: CTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGC...GCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS GCA 90 bp CGCTGCGAACAGCTGGTAGTAGCTCCCGATCGCCGTCTGGTCGATTaGCGTCTGGTCGGACTCCTTGCTGGGGCTGGGGTCAGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: RCEQLVVAPDRRLVD*RLVGLLAGAGVSAG
Trigger: CCCCGCGCTGACCCCAGCCCCAGCAAGGAGTCCGACCAGACGGCAATCGACCAGACGGCGATCGGGAGCTACTACCAGCTGTTCGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000483334.1
ENST00000496088.1
CDS-3UTR CAA 90 bp GGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCGGCTGGCTGGGCTGCTaGGACTCCGCGTCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: GRVTPRAWEWEAHRHPSPGWLGC*DSASVQ
Trigger: CTGGACTGACGCGGAGTCCAAGCAGCCCAGCCAGCC...GGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCACCCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CAA 90 bp CGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCGTCTGGTCGGACTCCTaGCTGGGGCTGGGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: RTAVPIRPHLQEAAEVVLVWSDS*LGLGSA
Trigger: CGCTGACCCCAGCCCCAGCAAGGAGTCCGACCAGAC...GAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CAA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCGGCGGTGGCCCGGGCTaGCTTGGTATTGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: LLELGSGKPIGTPPPFLAGGGPG*LGIGDQ
Trigger: CTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCC...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGGCGGTGGCCCGGGCTaGCTTGGTATTGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: GEGGGPGLLGIGDQRVAWGGGPG*LGIGDQ
Trigger: CTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCC...CCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAATGGAGCCACTTGGAGTaGGCTGCGGCCGAGCACCTC +
Preference number: 5 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQWSHLE*AAAEHL
Trigger: GAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCCA...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGGCTGGCTGGGCTGCTaGGACTCCGCGTCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: GWKLLERCDSRCSGVLERGWLGC*DSASVQ
Trigger: CTGGACTGACGCGGAGTCCAAGCAGCCCAGCCAGCC...CCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CAA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGCAGCCATTCCACGTaGCCCACAGCCGCTGCGAAC +
Preference number: 5 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQRSHST*PTAAAN
Trigger: GTTCGCAGCGGCTGTGGGCAACGTGGAATGGCTGCG...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCTGCAGGCATGCAAGCTaGCCCCATTGGGCGGCGAAG +
Preference number: 5 (lower is better)
Translates to: LLELGSGKPIGTPPPFLACRHAS*PHWAAK
Trigger: CTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCA...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCTCTTGGGCATGGACGTaGGCGCCACTCTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: LLELGSGKPIGTPPPFLASWAWT*APLCTR
Trigger: CCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAGA...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CAA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCTGGCCTGGGTGCAGCTaGCCGTGGAGCCACTTTCTG +
Preference number: 5 (lower is better)
Translates to: LLELGSGKPIGTPPPFLAWPGCS*PWSHFL
Trigger: CAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCA...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GGCCTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGCGTTGCTCTGGGGTCTaGGAGAGGGCGGTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: GLGSGLLIGKGDSSSLGVRCSGV*ERAVAR
Trigger: CCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACG...CACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CAA 90 bp CGCGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCGGTCCAGAAGGTGTaGTCACCCAGGTGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: RAPPCPSGLTSRKLLKSCSVQKV*SPRCRF
Trigger: GAAGCGGCACCTGGGTGACAACACCTTCTGGACCGA...GCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp AGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCACCCGGGGGCCACTCCTaGCCAGCTGGCCGCGGTTTC +
Preference number: 5 (lower is better)
Translates to: SPGAPSFCMAIHVGTACAPGGHS*PAGRGF
Trigger: GAAACCGCGGCCAGCTGGCAAGGAGTGGCCCCCGGG...TGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTGGAGCCACTTGGAGTaGGCTGCGGCCGAGCACCTC +
Preference number: 5 (lower is better)
Translates to: AHRHPSPFPRHPQRELPHWSHLE*AAAEHL
Trigger: GAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCCA...GTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp CGCGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCATGGCAGTGAAGCCCTaGTCGTCGGTGGGGATTTCC +
Preference number: 5 (lower is better)
Translates to: RAPPCPSGLTSRKLLKSCMAVKP*SSVGIS
Trigger: GGAAATCCCCACCGACGACAAGGGCTTCACTGCCAT...GCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp TCCAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGTGCAGGCATGCAAGCTaGCCCCATTGGGCGGCGAAG +
Preference number: 5 (lower is better)
Translates to: SRKLLKSCSGVGSGCTPRCRHAS*PHWAAK
Trigger: CTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCA...CCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCAGGTCCACGGGAAACTaGTACTCCTCTACCAGGACC +
Preference number: 5 (lower is better)
Translates to: RCDSRCSGVLERAVARACRSTGN*YSSTRT
Trigger: GGTCCTGGTAGAGGAGTACAAGTTTCCCGTGGACCT...GCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp ACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCGTAGCCCATGGCATCTaGGGCATGGACGTTGGCGCC +
Preference number: 5 (lower is better)
Translates to: TPRAWEWEAHRHPSPFPRVAHGI*GMDVGA
Trigger: GGCGCCAACGTCCATGCCCAAGATGCCATGGGCTAC...GCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CAA 90 bp TCCAGGAAGCTGCTGAAGTCGTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGTGGCCTGGGTGCAGCTaGCCGTGGAGCCACTTTCTG +
Preference number: 5 (lower is better)
Translates to: SRKLLKSCSGVGSGCTPRWPGCS*PWSHFL
Trigger: CAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCA...CCTGGGCGTGCATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCGTGGCCCGGGCTTGCTaGGTATTGGAGACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: LLELGSGKPIGTPPPFLAVARAC*VLETRE
Trigger: CTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCAC...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp TGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGGCTGCATGGAGCCACTaGGAGTTGGCTGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: WEAHRHPSPFPRHPQRELAAWSH*ELAAAE
Trigger: CTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGC...CAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp ACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCGTCTGGTCGGACTCCTaGCTGGGGCTGGGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: TPPPFLATHNVNCHTSAFVWSDS*LGLGSA
Trigger: CGCTGACCCCAGCCCCAGCAAGGAGTCCGACCAGAC...GAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CAA 90 bp AAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACCGCAGCCATTCCACGTaGCCCACAGCCGCTGCGAAC +
Preference number: 5 (lower is better)
Translates to: KPIGTPPPFLATHNVNCHRSHST*PTAAAN
Trigger: GTTCGCAGCGGCTGTGGGCAACGTGGAATGGCTGCG...GTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACAGGGCCACGGTGGTGTaGTCCCTGTGGATGACGAGG +
Preference number: 5 (lower is better)
Translates to: AHRHPSPFPRHPQRELPHRATVV*SLWMTR
Trigger: CCTCGTCATCCACAGGGACAACACCACCGTGGCCCT...GTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCAGGGCCACGGTGGTGTaGTCCCTGTGGATGACGAGG +
Preference number: 5 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCRATVV*SLWMTR
Trigger: CCTCGTCATCCACAGGGACAACACCACCGTGGCCCT...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAAGTGGCCCGGGCTTGCTaGGTATTGGAGACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQVARAC*VLETRE
Trigger: CTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCAC...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp ACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCTCGGTCCAGAAGGTGTaGTCACCCAGGTGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: TPRAWEWEAHRHPSPFPRSVQKV*SPRCRF
Trigger: GAAGCGGCACCTGGGTGACAACACCTTCTGGACCGA...GCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GTGCTCCGGAGTGGGGTCTGGATGCACGCCCAGGCGGATGCCCTGCGAGTGGCTCACCCACAACGTGAATaGCCACACTTCAGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: VLRSGVWMHAQADALRVAHPQRE*PHFSLH
Trigger: GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTG...AGCCACTCGCAGGGCATCCGCCTGGGCGTGCATCCAGACCCCACTCCGGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS GCA 90 bp TCCGCGTCAGTCCAGGTGGCCTTCAAGGAGACTTTGTTCGCCTGCTaGATGGAGCCACTTGGAGTTGGCTGCGGCCGAGCACCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: SASVQVAFKETLFAC*MEPLGVGCGRAPLP
Trigger: AGGGAGAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCTGGACTGACGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS GCA 90 bp GACTCCGCGTCAGTCCAGGTGGCCTTCAAGGAGACTTTGTTCGCCTaGTGCATGGAGCCACTTGGAGTTGGCTGCGGCCGAGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: DSASVQVAFKETLFA*CMEPLGVGCGRAPL
Trigger: GAGAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCTGGACTGACGCGGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS GCA 90 bp ACTCTGCACCAGGACCTTCACACAGTCCAGCAAGCCGTCACGGGCTaGCAGGTGCAGGGGCGTGGAGCCGTTGCATGTCTGAGCATTGAG +
Preference number: 5 (lower is better)
Translates to: TLHQDLHTVQQAVTG*QVQGRGAVACLSIE
Trigger: CTCAATGCTCAGACATGCAACGGCTCCACGCCCCTGCACCTGGCAGCCCGTGACGGCTTGCTGGACTGTGTGAAGGTCCTGGTGCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS-3UTR CAA 90 bp GGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGCCTTCAAGGAGACTTaGTTCGCCTGCTGCATGGAG +
Preference number: 5 (lower is better)
Translates to: GEGGGPGLLGIGDQRVAWAFKET*FACCME
Trigger: CTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGC...CCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GGCCTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGTCGCCGTCTGGTCGATaGCCGTCTGGTCGGACTCCT +
Preference number: 5 (lower is better)
Translates to: GLGSGLLIGKGDSSSLGVSPSGR*PSGRTP
Trigger: AGGAGTCCGACCAGACGGCAATCGACCAGACGGCGA...CACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CAA 90 bp GCATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCTCGCCGTCTGGTCGATaGCCGTCTGGTCGGACTCCT +
Preference number: 5 (lower is better)
Translates to: ALQACIHRGVEAPGTLRFSPSGR*PSGRTP
Trigger: AGGAGTCCGACCAGACGGCAATCGACCAGACGGCGA...GAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTCGCAGCCATTCCACGTaGCCCACAGCCGCTGCGAAC +
Preference number: 5 (lower is better)
Translates to: LGIGDQRVAWVQLAVEPLRSHST*PTAAAN
Trigger: GTTCGCAGCGGCTGTGGGCAACGTGGAATGGCTGCG...AAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAAAGGGGTGTCTGGCTATaGTTGGTCAGCAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQRGVWL*LVSRST
Trigger: CGTGGACCTGCTGACCAACAATAGCCAGACACCCCT...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAAGGGGTGTCTGGCTATaGTTGGTCAGCAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: ALGSWRGRWPGLAWYWRPRGVWL*LVSRST
Trigger: CGTGGACCTGCTGACCAACAATAGCCAGACACCCCT...TGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCGTGGCCCGGGCTTGCTaGGTATTGGAGACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCVARAC*VLETRE
Trigger: CTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCAC...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCGGGGGTCTGGCGGGGTaGTTGCTAACATTCCACATT +
Preference number: 5 (lower is better)
Translates to: GRVTPRAWEWEAHRHPSPGGLAG*LLTFHI
Trigger: AATGTGGAATGTTAGCAACAACCCCGCCAGACCCCC...GGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCACCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTCGGTCCAGAAGGTGTaGTCACCCAGGTGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: GTPPPFLATHNVNCHTSASVQKV*SPRCRF
Trigger: GAAGCGGCACCTGGGTGACAACACCTTCTGGACCGA...GGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAACAGGGTGGGGAGTCCTaGATGAGATCGCACAGCTGC +
Preference number: 5 (lower is better)
Translates to: EWEAHRHPSPFPRHPQREQGGES*MRSHSC
Trigger: GCAGCTGTGCGATCTCATCAAGGACTCCCCACCCTG...TTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCAGCACTGGGGCTGGGCTGCTaGGACTCCGCGTCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: GAPSFCMAIHVGTACAAALGLGC*DSASVQ
Trigger: CTGGACTGACGCGGAGTCCAAGCAGCCCAGCCCCAG...TGCTGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441349.5
CDS GCA 90 bp ATGCAGGGGAGGGCCACGGTGGTGTTGTCCCTGTGGATGACGAGGTaGAGGGGTGTCTGGCTATTGTTGGTCAGCAGGTCCACGGGAAAC +
Preference number: 5 (lower is better)
Translates to: MQGRATVVLSLWMTR*RGVWLLLVSRSTGN
Trigger: GTTTCCCGTGGACCTGCTGACCAACAATAGCCAGACACCCCTGCACCTCGTCATCCACAGGGACAACACCACCGTGGCCCTCCCCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CCA 90 bp CGTCAGTCCAGGTGGCCTTCAAGGAGACTTTGTTCGCCTGCTGCATaGAGCCACTTGGAGTTGGCTGCGGCCGAGCACCTCTCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: RQSRWPSRRLCSPAA*SHLELAAAEHLSLL
Trigger: GAGAAGGGAGAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCTGGACTGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS CCA 90 bp TTGTACTCCTCTACCAGGACCTGCAGGCATGCAAGCTTGCCCCATTaGGCGGCGAAGTGGATGGCAGTGAAGCCCTTGTCGTCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LYSSTRTCRHASLPH*AAKWMAVKPLSSVG
Trigger: CCCCACCGACGACAAGGGCTTCACTGCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGAGGAGTACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CCA 90 bp ACTCCTTGCTGGGGCTGGGCTGCTTGGACTCCGCGTCAGTCCAGGTaGCCTTCAAGGAGACTTTGTTCGCCTGCTGCATGGAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: TPCWGWAAWTPRQSR*PSRRLCSPAAWSHL
Trigger: CAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCTGGACTGACGCGGAGTCCAAGCAGCCCAGCCCCAGCAAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441349.5
ENST00000457410.5
CDS-3UTR CAA 90 bp CCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCATGGAGCCACTTGGAGTaGGCTGCGGCCGAGCACCTC +
Preference number: 5 (lower is better)
Translates to: PGAPSFCMAIHVGTACAAWSHLE*AAAEHL
Trigger: GAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCCA...TGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp AACATTCCACATTGTGGGCCGCTTGACCGTGGGCTTCCTGTAGATGGGCTTGGGGCTGCATGGAGCCACTaGGAGTTGGCTGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: NIPHCGPLDRGLPVDGLGAAWSH*ELAAAE
Trigger: CTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGC...CCCAAGCCCATCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGTGGAATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCTCGCCGTCTGGTCGATaGCCGTCTGGTCGGACTCCT +
Preference number: 5 (lower is better)
Translates to: PWGTFILYGHTRGYSMRSSPSGR*PSGRTP
Trigger: AGGAGTCCGACCAGACGGCAATCGACCAGACGGCGA...GCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACTGCAAGCTTGCCCCATaGGGCGGCGAAGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHCKLAP*GGEVDG
Trigger: GCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCA...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCTGAGTGCAGGCATGCAAGCTaGCCCCATTGGGCGGCGAAG +
Preference number: 5 (lower is better)
Translates to: VAWVQLAVEPLSDSSFSECRHAS*PHWAAK
Trigger: CTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCA...CTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAAAGGTCCACGGGAAACTaGTACTCCTCTACCAGGACC +
Preference number: 5 (lower is better)
Translates to: AWEWEAHRHPSPFPRHPQRSTGN*YSSTRT
Trigger: GGTCCTGGTAGAGGAGTACAAGTTTCCCGTGGACCT...TTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp CACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTGTAGCCCATGGCATCTaGGGCATGGACGTTGGCGCC +
Preference number: 5 (lower is better)
Translates to: HPSPFPRHPQRELPHFSLVAHGI*GMDVGA
Trigger: GGCGCCAACGTCCATGCCCAAGATGCCATGGGCTAC...AAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CAA 90 bp CGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCAGGGTCAGCTGGCTCTaGAACATCTTCATTTTCGTC +
Preference number: 5 (lower is better)
Translates to: RCDSRCSGVLERAVARACRVSWL*NIFIFV
Trigger: GACGAAAATGAAGATGTTCAAGAGCCAGCTGACCCT...GCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCTGAGTGGCCTGGGTGCAGCTaGCCGTGGAGCCACTTTCTG +
Preference number: 5 (lower is better)
Translates to: VAWVQLAVEPLSDSSFSEWPGCS*PWSHFL
Trigger: CAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCA...CTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GCATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCACGCTGCGATTCCCGTaGCTCTGGGGTCTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: ALQACIHRGVEAPGTLRFTLRFP*LWGLGE
Trigger: CTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGT...GAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CGCACCGCCGTGCCCATCAGGCCTCACCTCCAGGAAGCTGCTGAAGTCGTGCTCGGTCTGGCGGGGTTGTaGCTAACATTCCACATTGTG +
Preference number: 5 (lower is better)
Translates to: RTAVPIRPHLQEAAEVVLGLAGL*LTFHIV
Trigger: CACAATGTGGAATGTTAGCAACAACCCCGCCAGACC...GAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCGGTCTGGCGGGGTTGTaGCTAACATTCCACATTGTG +
Preference number: 5 (lower is better)
Translates to: LLELGSGKPIGTPPPFLAGLAGL*LTFHIV
Trigger: CACAATGTGGAATGTTAGCAACAACCCCGCCAGACC...GGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAAGCCCATAGGCACCCCTCCCCCCACCCACAACGTGAATaGCCACACTTCAGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: GRVTPRAWEWEAHRHPSPHPQRE*PHFSLH
Trigger: GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTG...GGGGGAGGGGTGCCTATGGGCTTCCCACTCCCAAGCTCGAGGAGTCACCCTTCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS TCA 90 bp GGTAGTAGATGCAGGGGAGGGCCACGGTGGTGTTGTCCCTGTGGATaGCGAGGTGCAGGGGTGTCTGGCTATTGTTGGTCAGCAGGTCCA +
Preference number: 5 (lower is better)
Translates to: GSRCRGGPRWCCPCG*RGAGVSGYCWSAGP
Trigger: TGGACCTGCTGACCAACAATAGCCAGACACCCCTGCACCTCGTCATCCACAGGGACAACACCACCGTGGCCCTCCCCTGCATCTACTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS GCA 90 bp CAGGTCCACGGGAAACTTGTACTCCTCTACCAGGACCTGCAGGCATaGAAGCTTGCCCCATTGGGCGGCGAAGTGGATGGCAGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: QVHGKLVLLYQDLQA*KLAPLGGEVDGSEA
Trigger: GGCTTCACTGCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGAGGAGTACAAGTTTCCCGTGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS-3UTR CAA 90 bp AAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGGCGGTGGCCTTCAAGGAGACTTaGTTCGCCTGCTGCATGGAG +
Preference number: 5 (lower is better)
Translates to: KLLERCDSRCSGVLERAVAFKET*FACCME
Trigger: CTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGC...CACCGCCCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp AACATTCCACATTGTGGGCCGCTTGACCGTGGGCTTCCTGTAGATGGGCTTGGGAGGGCCACGGTGGTGTaGTCCCTGTGGATGACGAGG +
Preference number: 5 (lower is better)
Translates to: NIPHCGPLDRGLPVDGLGRATVV*SLWMTR
Trigger: CCTCGTCATCCACAGGGACAACACCACCGTGGCCCT...CCCAAGCCCATCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGTGGAATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp ACGTGGGTACAGCATGCGCAGCAGCACCTCAAAAGGCAGCCGCGGCACGGGCGCAGGGTCAGCTGGCTCTaGAACATCTTCATTTTCGTC +
Preference number: 5 (lower is better)
Translates to: TWVQHAQQHLKRQPRHGRRVSWL*NIFIFV
Trigger: GACGAAAATGAAGATGTTCAAGAGCCAGCTGACCCT...GCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGTACCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GGCCTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGCGGGCTTGCTTGGTATaGGAGACCAGAGAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: GLGSGLLIGKGDSSSLGVRACLV*ETREWP
Trigger: AGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCG...CACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CAA 90 bp CACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTACGCTGCGATTCCCGTaGCTCTGGGGTCTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: HPSPFPRHPQRELPHFSLTLRFP*LWGLGE
Trigger: CTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGT...AAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp CCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTGGGCTGTGGAATGCATaGCAGGCGTGCATCCACAGA +
Preference number: 5 (lower is better)
Translates to: PIGTPPPFLATHNVNCHTGLWNA*QACIHR
Trigger: TCTGTGGATGCACGCCTGCAATGCATTCCACAGCCC...AGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp CTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTCAGGGTGGGGAGTCCTaGATGAGATCGCACAGCTGC +
Preference number: 5 (lower is better)
Translates to: LGIGDQRVAWVQLAVEPLQGGES*MRSHSC
Trigger: GCAGCTGTGCGATCTCATCAAGGACTCCCCACCCTG...AAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS CCA 90 bp ATGGCAGTGAAGCCCTTGTCGTCGGTGGGGATTTCCCTGAGGCTCTaGTTCAGACAGAATCGCAGCCATTCCACGTTGCCCACAGCCGCT +
Preference number: 5 (lower is better)
Translates to: MAVKPLSSVGISLRL*FRQNRSHSTLPTAA
Trigger: AGCGGCTGTGGGCAACGTGGAATGGCTGCGATTCTGTCTGAACCAGAGCCTCAGGGAAATCCCCACCGACGACAAGGGCTTCACTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS-3UTR CAA 90 bp AAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACGCCTTCAAGGAGACTTaGTTCGCCTGCTGCATGGAG +
Preference number: 5 (lower is better)
Translates to: KPIGTPPPFLATHNVNCHAFKET*FACCME
Trigger: CTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGC...GTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp CTGGGGTCTGGGCTTTTGATTGGGAAGGGTGACTCCTCGAGCTTGGGAGTGGGAATGGCAGTGAAGCCCTaGTCGTCGGTGGGGATTTCC +
Preference number: 5 (lower is better)
Translates to: LGSGLLIGKGDSSSLGVGMAVKP*SSVGIS
Trigger: GGAAATCCCCACCGACGACAAGGGCTTCACTGCCAT...TCCCACTCCCAAGCTCGAGGAGTCACCCTTCCCAATCAAAAGCCCAGACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CAA 90 bp GGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCACACTGCATCCTaGACCTTGATACTCAATCAG +
Preference number: 5 (lower is better)
Translates to: GEGGGPGLLGIGDQRVAWVHTAS*TLILNQ
Trigger: CTGATTGAGTATCAAGGTCAAGGATGCAGTGTGCAC...CCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CTTGGTATTGGAGACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTCGGGCTTGCTTGGTATaGGAGACCAGAGAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: LGIGDQRVAWVQLAVEPLRACLV*ETREWP
Trigger: AGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCG...AAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGTCTCCAATACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCGGGCTGTGGAATGCATaGCAGGCGTGCATCCACAGA +
Preference number: 5 (lower is better)
Translates to: PWGTFILYGHTRGYSMRSGLWNA*QACIHR
Trigger: TCTGTGGATGCACGCCTGCAATGCATTCCACAGCCC...GCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GCATTGCAGGCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCGGGGGTCTGGCGGGGTaGTTGCTAACATTCCACATT +
Preference number: 5 (lower is better)
Translates to: ALQACIHRGVEAPGTLRFGGLAG*LLTFHI
Trigger: AATGTGGAATGTTAGCAACAACCCCGCCAGACCCCC...GAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGCCTGCAATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS CCA 90 bp GCCACGGTGGTGTTGTCCCTGTGGATGACGAGGTGCAGGGGTGTCTaGCTATTGTTGGTCAGCAGGTCCACGGGAAACTTGTACTCCTCT +
Preference number: 5 (lower is better)
Translates to: ATVVLSLWMTRCRGV*LLLVSRSTGNLYSS
Trigger: AGAGGAGTACAAGTTTCCCGTGGACCTGCTGACCAACAATAGCCAGACACCCCTGCACCTCGTCATCCACAGGGACAACACCACCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS-3UTR CAA 90 bp TCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCATGCAAGCTTGCCCCATaGGGCGGCGAAGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: SNVSRRFMARVSVQKVLSCKLAP*GGEVDG
Trigger: GCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCA...TGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp ATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCTGCAAGCTTGCCCCATaGGGCGGCGAAGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: IECVTQVHGQSVGPEGVVCKLAP*GGEVDG
Trigger: GCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCA...GACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACCCAGGAGGTCCACGGGAAACTaGTACTCCTCTACCAGGACC +
Preference number: 5 (lower is better)
Translates to: VSRRFMARVSVQKVLSPRRSTGN*YSSTRT
Trigger: GGTCCTGGTAGAGGAGTACAAGTTTCCCGTGGACCT...CCTGGGTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGCGCAGCAAGGGGTGTCTGGCTATaGTTGGTCAGCAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: PGAPSFCMAIHVGTACAARGVWL*LVSRST
Trigger: CGTGGACCTGCTGACCAACAATAGCCAGACACCCCT...TGCTGCGCATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp TCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCATCTTGGGCATGGACGTaGGCGCCACTCTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: SNVSRRFMARVSVQKVLSSWAWT*APLCTR
Trigger: CCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAGA...TGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CAA 90 bp GCGTGCATCCACAGAGGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCCGGGCAAAGTCCTTCTaGTCCTTTTTCCACATGGCA +
Preference number: 5 (lower is better)
Translates to: ACIHRGVEAPGTLRFPLLRAKSF*SFFHMA
Trigger: TGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCG...GAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCTCTGTGGATGCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GGGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGCGGGCAAAGTCCTTCTaGTCCTTTTTCCACATGGCA +
Preference number: 5 (lower is better)
Translates to: GVEAPGTLRFPLLWGLGERAKSF*SFFHMA
Trigger: TGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCG...CTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GCTCTGGGGTCTTGGAGAGGGCGGTGGCCCGGGCTTGCTTGGTATTGGAGACCAGTGCACACTGCATCCTaGACCTTGATACTCAATCAG +
Preference number: 5 (lower is better)
Translates to: ALGSWRGRWPGLAWYWRPVHTAS*TLILNQ
Trigger: CTGATTGAGTATCAAGGTCAAGGATGCAGTGTGCAC...TGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCTCTCCAAGACCCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GTAAAAGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGGCGGTGGCCCGGGCTaGCTTGGTATTGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: VKALGHLHSVWPYTWVQHGGGPG*LGIGDQ
Trigger: CTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCC...ATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCTTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS CCA 90 bp AGAAGTCAATGGGTTTGTAGCCCATGGCATCTTGGGCATGGACGTTaGCGCCACTCTGCACCAGGACCTTCACACAGTCCAGCAAGCCGT +
Preference number: 5 (lower is better)
Translates to: RSQWVCSPWHLGHGR*RHSAPGPSHSPASR
Trigger: ACGGCTTGCTGGACTGTGTGAAGGTCCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAGATGCCATGGGCTACAAACCCATTGACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS CCA 90 bp CATCCTTCAAGAACCTTGTCGTCGGTGGGGATTTCCCTGAGGCTCTaGTTCAGACAGAATCGCAGCCATTCCACGTTGCCCACAGCCGCT +
Preference number: 5 (lower is better)
Translates to: HPSRTLSSVGISLRL*FRQNRSHSTLPTAA
Trigger: AGCGGCTGTGGGCAACGTGGAATGGCTGCGATTCTGTCTGAACCAGAGCCTCAGGGAAATCCCCACCGACGACAAGGTTCTTGAAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483334.1
CDS-3UTR CAA 90 bp CCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTCGGGCAAAGTCCTTCTaGTCCTTTTTCCACATGGCA +
Preference number: 5 (lower is better)
Translates to: PIGTPPPFLATHNVNCHTRAKSF*SFFHMA
Trigger: TGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCG...AGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp GTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTTCTCTGAGGGTCTGGCGGGGTTGTaGCTAACATTCCACATTGTG +
Preference number: 5 (lower is better)
Translates to: VAWVQLAVEPLSDSSFSEGLAGL*LTFHIV
Trigger: CACAATGTGGAATGTTAGCAACAACCCCGCCAGACC...CTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp ACCAGAGAGTGGCCTGGGTGCAGCTTGCCGTGGAGCCACTTTCTGATAGCAGCTCACCCACAACGTGAATaGCCACACTTCAGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: TREWPGCSLPWSHFLIAAHPQRE*PHFSLH
Trigger: GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTG...AGCTGCTATCAGAAAGTGGCTCCACGGCAAGCTGCACCCAGGCCACTCTCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACTCCTTCAAGAACGCATaGAGGTCTGCGCCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHSFKNA*RSAPFS
Trigger: GGAGAAAGGCGCAGACCTCAATGCGTTCTTGAAGGA...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441349.5
CDS CCA 90 bp AGAACCGGGCACAGGCACGGTGGTTCCATATTTTGCAGAAGTCAATaGGTTTGTAGCCCATGGCATCTTGGGCATGGACGTTGGCGCCAC +
Preference number: 5 (lower is better)
Translates to: RTGHRHGGSIFCRSQ*VCSPWHLGHGRWRH
Trigger: GTGGCGCCAACGTCCATGCCCAAGATGCCATGGGCTACAAACCCATTGACTTCTGCAAAATATGGAACCACCGTGCCTGTGCCCGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS-3UTR CAA 90 bp TCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGATGGCAGTGAAGCCCTaGTCGTCGGTGGGGATTTCC +
Preference number: 5 (lower is better)
Translates to: SSNVSRRFMARVSVQKVLMAVKP*SSVGIS
Trigger: GGAAATCCCCACCGACGACAAGGGCTTCACTGCCAT...CAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp TTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTACGCTGCGATTCCCGTaGCTCTGGGGTCTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: FIECVTQVHGQSVGPEGVTLRFP*LWGLGE
Trigger: CTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGT...AACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GTAAAAGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATCAGGGTGGGGAGTCCTaGATGAGATCGCACAGCTGC +
Preference number: 5 (lower is better)
Translates to: VKALGHLHSVWPYTWVQHQGGES*MRSHSC
Trigger: GCAGCTGTGCGATCTCATCAAGGACTCCCCACCCTG...ATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCTTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GGGTGGAAGCTCCTGGAACGCTGCGATTCCCGTTGCTCTGGGGTCTTGGAGAGGTGCCAAGAGATTTATTaGCAGAGAAAAGGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: GWKLLERCDSRCSGVLERCQEIY*QRKGRP
Trigger: AGGCCTCCCTTTTCTCTGCAAATAAATCTCTTGGCA...CCTCTCCAAGACCCCAGAGCAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS-3UTR CAA 90 bp GGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCTGCCAAGAGATTTATTaGCAGAGAAAAGGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: GKPIGTPPPFLATHNVNCCQEIY*QRKGRP
Trigger: AGGCCTCCCTTTTCTCTGCAAATAAATCTCTTGGCA...GCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS CCA 90 bp CACGGTGGTTCCATATTTTGCAGAAGTCAATGGGTTTGTAGCCCATaGCATCTTGGGCATGGACGTTGGCGCCACTCTGCACCAGGACCT +
Preference number: 5 (lower is better)
Translates to: HGGSIFCRSQWVCSP*HLGHGRWRHSAPGP
Trigger: AGGTCCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAGATGCCATGGGCTACAAACCCATTGACTTCTGCAAAATATGGAACCACCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS-3UTR CAA 90 bp TGGGAAGCCCATAGGCACCCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCGGTGGTTCCATATTTaGCAGAAGTCAATGGGTTTG +
Preference number: 5 (lower is better)
Translates to: WEAHRHPSPFPRHPQRELRWFHI*QKSMGL
Trigger: CAAACCCATTGACTTCTGCAAAATATGGAACCACCG...CAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGGGTGCCTATGGGCTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS-3UTR CAA 90 bp CCCTCCCCCTTTCCTCGCCACCCACAACGTGAATTGCCACACTTCAGCCTTCACAGGGTCAGCTGGCTCTaGAACATCTTCATTTTCGTC +
Preference number: 5 (lower is better)
Translates to: PSPFPRHPQRELPHFSLHRVSWL*NIFIFV
Trigger: GACGAAAATGAAGATGTTCAAGAGCCAGCTGACCCT...GTGAAGGCTGAAGTGTGGCAATTCACGTTGTGGGTGGCGAGGAAAGGGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
CDS-3UTR CAA 90 bp TTCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGGGCTGTGGAATGCATaGCAGGCGTGCATCCACAGA +
Preference number: 5 (lower is better)
Translates to: FIECVTQVHGQSVGPEGVGLWNA*QACIHR
Trigger: TCTGTGGATGCACGCCTGCAATGCATTCCACAGCCC...AACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GTAAAAGCCCTGGGGCACCTTCATTCTGTATGGCCATACACGTGGGTACAGCATGGGGGTCTGGCGGGGTaGTTGCTAACATTCCACATT +
Preference number: 5 (lower is better)
Translates to: VKALGHLHSVWPYTWVQHGGLAG*LLTFHI
Trigger: AATGTGGAATGTTAGCAACAACCCCGCCAGACCCCC...ATGCTGTACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS GCA 90 bp TGGCATCCTTCAAGAACCGGGCACAGGCACGGTGGTTCCATATTTTaGAGAAGTCAATGGGTTTGTAGCCCATGGCATCTTGGGCATGGA +
Preference number: 5 (lower is better)
Translates to: WHPSRTGHRHGGSIF*RSQWVCSPWHLGHG
Trigger: TCCATGCCCAAGATGCCATGGGCTACAAACCCATTGACTTCTGCAAAATATGGAACCACCGTGCCTGTGCCCGGTTCTTGAAGGATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS-3UTR CAA 90 bp TCATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGCGGTGGTTCCATATTTaGCAGAAGTCAATGGGTTTG +
Preference number: 5 (lower is better)
Translates to: SSNVSRRFMARVSVQKVLRWFHI*QKSMGL
Trigger: CAAACCCATTGACTTCTGCAAAATATGGAACCACCG...CAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272421.10
CDS TCA 90 bp AGTCTGATAGTAGAGAAATGTCCTGCCATAGGAGAGTCTCTGGTGTaGTGGGGGAAAAGGCAAATGGGAAGTGCACACTGCATCCTTGAC +
Preference number: 5 (lower is better)
Translates to: SLIVEKCPAIGESLV*WGKRQMGSAHCILD
Trigger: GTCAAGGATGCAGTGTGCACTTCCCATTTGCCTTTTCCCCCATCACACCAGAGACTCTCCTATGGCAGGACATTTCTCTACTATCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000441349.5
ENST00000460927.1
CDS-3UTR CAA 90 bp ATCGAATGTGTCACGCAGGTTCATGGCCAGAGTGTCGGTCCAGAAGGTGTTGTCACTGCATCCTTGACCTaGATACTCAATCAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: IECVTQVHGQSVGPEGVVTASLT*ILNQVV
Trigger: AACTACCTGATTGAGTATCAAGGTCAAGGATGCAGT...GACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS GCA 90 bp CTTCTTCTCCAAAGGAATCCACAGTCTGATAGTAGAGAAATGTCCTaGCATAGGAGAGTCTCTGGTGTGATGGGGGAAAAGGCAAATGGG +
Preference number: 5 (lower is better)
Translates to: LLLQRNPQSDSREMS*HRRVSGVMGEKANG
Trigger: CCCATTTGCCTTTTCCCCCATCACACCAGAGACTCTCCTATGGCAGGACATTTCTCTACTATCAGACTGTGGATTCCTTTGGAGAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS-3UTR CAA 90 bp GTTGTTGCTAACATTCCACATTGTGGGCCGCTTGACCGTGGGCTTCCTGTAGATACTGCATCCTTGACCTaGATACTCAATCAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: VVANIPHCGPLDRGLPVDTASLT*ILNQVV
Trigger: AACTACCTGATTGAGTATCAAGGTCAAGGATGCAGT...ATCTACAGGAAGCCCACGGTCAAGCGGCCCACAATGTGGAATGTTAGCAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000441349.5
CDS GCA 72 bp GAGGCAGGGCGGCGCGGCCTGGCGAGGGCAGTCGCCTaGGCACTGAGGTGGTCTGCGAGGTCGGGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: EAGRRGLARAVA*ALRWSARSGRG
Trigger: GCCCCTGCCCGACCTCGCAGACCACCTCAGTGCGCAGGCGACTGCCCTCGCCAGGCCGCGCCGCCCTGCCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000483334.1
ENST00000496088.1
CDS CCA 72 bp GCCGAGCGGTGCTGCCCGCGGAGGCCATCGCGGGGCTaGAACTCGGACCCGGGCCGGGCGGGCTACTCACAC +
Preference number: 6 (lower is better)
Translates to: AERCCPRRPSRG*NSDPGRAGYSH
Trigger: GTGTGAGTAGCCCGCCCGGCCCGGGTCCGAGTTCCAGCCCCGCGATGGCCTCCGCGGGCAGCACCGCTCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000441349.5
ENST00000457410.5
CDS GCA 72 bp CTGAGTGCCAGCTTCCGGAGCCCGCCCGCCGAGCGGTaGTGCCCGCGGAGGCCATCGCGGGGCTGGAACTCG +
Preference number: 6 (lower is better)
Translates to: LSASFRSPPAER*CPRRPSRGWNS
Trigger: CGAGTTCCAGCCCCGCGATGGCCTCCGCGGGCAGCACCGCTCGGCGGGCGGGCTCCGGAAGCTGGCACTCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000441349.5
ENST00000457410.5
CDS GCA 72 bp CCTGGCGAGGGCAGTCGCCTGCGCACTGAGGTGGTCTaGGAGGTCGGGCAGGGGCTGGCTGGGCTGCTTGGA +
Preference number: 6 (lower is better)
Translates to: PGEGSRLRTEVV*EVGQGLAGLLG
Trigger: TCCAAGCAGCCCAGCCAGCCCCTGCCCGACCTCGCAGACCACCTCAGTGCGCAGGCGACTGCCCTCGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS TCA 72 bp TGGCTGCGGCCGAGCACCTCTCCCTTCTCCCCTTTCTaGGTGCCAGCTTCCGGAGCCCGCCCGCCGAGCGGT +
Preference number: 6 (lower is better)
Translates to: WLRPSTSPFSPF*VPASGARPPSG
Trigger: ACCGCTCGGCGGGCGGGCTCCGGAAGCTGGCACTCAGAAAGGGGAGAAGGGAGAGGTGCTCGGCCGCAGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS CAA 90 bp CCGCTGCGAACAGCTGGTAGTAGCTCCCGATCGCCGTCTGGTCGATaGCCGTCTGGTCGGACTCCTTGCTGGGGCTGGGGTCAGCGCGGG +
Preference number: 6 (lower is better)
Translates to: PLRTAGSSSRSPSGR*PSGRTPCWGWGQRG
Trigger: CCCGCGCTGACCCCAGCCCCAGCAAGGAGTCCGACCAGACGGCAATCGACCAGACGGCGATCGGGAGCTACTACCAGCTGTTCGCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000483334.1
ENST00000496088.1
CDS GCA 72 bp CAGCTGGTAGTAGCTCCCGATCGCCGTCTGGTCGATTaGCGTCTGGTCGGACTCCTTGCTGGGGCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: QLVVAPDRRLVD*RLVGLLAGAGV
Trigger: GACCCCAGCCCCAGCAAGGAGTCCGACCAGACGGCAATCGACCAGACGGCGATCGGGAGCTACTACCAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000483334.1
ENST00000496088.1
CDS GCA 72 bp CAGGACCTTCACACAGTCCAGCAAGCCGTCACGGGCTaGCAGGTGCAGGGGCGTGGAGCCGTTGCATGTCTG +
Preference number: 6 (lower is better)
Translates to: QDLHTVQQAVTG*QVQGRGAVACL
Trigger: CAGACATGCAACGGCTCCACGCCCCTGCACCTGGCAGCCCGTGACGGCTTGCTGGACTGTGTGAAGGTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS CAA 72 bp ACAGCTGGTAGTAGCTCCCGATCGCCGTCTGGTCGATaGCCGTCTGGTCGGACTCCTTGCTGGGGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: TAGSSSRSPSGR*PSGRTPCWGWG
Trigger: ACCCCAGCCCCAGCAAGGAGTCCGACCAGACGGCAATCGACCAGACGGCGATCGGGAGCTACTACCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000483334.1
ENST00000496088.1
CDS CAA 72 bp ACAGCTGGTAGTAGCTCCCGATCGCCGTCTGGTCGATaGCCGTCTGGTCGGACTCCTTGCTGGGGCTGGGCT +
Preference number: 6 (lower is better)
Translates to: TAGSSSRSPSGR*PSGRTPCWGWA
Trigger: AGCCCAGCCCCAGCAAGGAGTCCGACCAGACGGCAATCGACCAGACGGCGATCGGGAGCTACTACCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441349.5
ENST00000457410.5
CDS CAA 90 bp GGCTGCTTGGACTCCGCGTCAGTCCAGGTGGCCTTCAAGGAGACTTaGTTCGCCTGCTGCATGGAGCCACTTGGAGTTGGCTGCGGCCGA +
Preference number: 6 (lower is better)
Translates to: GCLDSASVQVAFKET*FACCMEPLGVGCGR
Trigger: TCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCTGGACTGACGCGGAGTCCAAGCAGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS CCA 72 bp GCTGGCTGGGCTGCTTGGACTCCGCGTCAGTCCAGGTaGCCTTCAAGGAGACTTTGTTCGCCTGCTGCATGG +
Preference number: 6 (lower is better)
Translates to: AGWAAWTPRQSR*PSRRLCSPAAW
Trigger: CCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCTGGACTGACGCGGAGTCCAAGCAGCCCAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272421.10
ENST00000360589.4
CDS CCA 72 bp TGGGGCTGGGCTGCTTGGACTCCGCGTCAGTCCAGGTaGCCTTCAAGGAGACTTTGTTCGCCTGCTGCATGG +
Preference number: 6 (lower is better)
Translates to: WGWAAWTPRQSR*PSRRLCSPAAW
Trigger: CCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCTGGACTGACGCGGAGTCCAAGCAGCCCAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441349.5
ENST00000457410.5
CDS CAA 72 bp TGGCCAGAGGGAGAGGAGCAAGATGAGCCATCCCCATaGCCCGGGGCCCTCTGGCTCCCTACTTCCTTTAGG +
Preference number: 6 (lower is better)
Translates to: WPEGEEQDEPSP*PGALWLPTSFR
Trigger: CCTAAAGGAAGTAGGGAGCCAGAGGGCCCCGGGCAATGGGGATGGCTCATCTTGCTCCTCTCCCTCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460927.1
CDS CAA 90 bp CTTGTACTCCTCTACCAGGACCTGCAGGCATGCAAGCTTGCCCCATaGGGCGGCGAAGTGGATGGCAGTGAAGCCCTTGTCGTCGGTGGG +
Preference number: 6 (lower is better)
Translates to: LVLLYQDLQACKLAP*GGEVDGSEALVVGG
Trigger: CCCACCGACGACAAGGGCTTCACTGCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGAGGAGTACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS TCA 72 bp TGCAGGGGAGGGCCACGGTGGTGTTGTCCCTGTGGATaGCGAGGTGCAGGGGTGTCTGGCTATTGTTGGTCA +
Preference number: 6 (lower is better)
Translates to: CRGGPRWCCPCG*RGAGVSGYCWS
Trigger: TGACCAACAATAGCCAGACACCCCTGCACCTCGTCATCCACAGGGACAACACCACCGTGGCCCTCCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS GCA 72 bp AGGGCCACGGTGGTGTTGTCCCTGTGGATGACGAGGTaGAGGGGTGTCTGGCTATTGTTGGTCAGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: RATVVLSLWMTR*RGVWLLLVSRS
Trigger: GGACCTGCTGACCAACAATAGCCAGACACCCCTGCACCTCGTCATCCACAGGGACAACACCACCGTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS GCA 72 bp CCCATGGCATCTTGGGCATGGACGTTGGCGCCACTCTaGACCAGGACCTTCACACAGTCCAGCAAGCCGTCA +
Preference number: 6 (lower is better)
Translates to: PMASWAWTLAPL*TRTFTQSSKPS
Trigger: TGACGGCTTGCTGGACTGTGTGAAGGTCCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAGATGCCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS CCA 72 bp CAAGGAGACTTTGTTCGCCTGCTGCATGGAGCCACTTaGAGTTGGCTGCGGCCGAGCACCTCTCCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: QGDFVRLLHGAT*SWLRPSTSPFS
Trigger: GGAGAAGGGAGAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS CCA 72 bp AGGTGGCCTTCAAGGAGACTTTGTTCGCCTGCTGCATaGAGCCACTTGGAGTTGGCTGCGGCCGAGCACCTC +
Preference number: 6 (lower is better)
Translates to: RWPSRRLCSPAA*SHLELAAAEHL
Trigger: GAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS CCA 72 bp TCTACCAGGACCTGCAGGCATGCAAGCTTGCCCCATTaGGCGGCGAAGTGGATGGCAGTGAAGCCCTTGTCG +
Preference number: 6 (lower is better)
Translates to: STRTCRHASLPH*AAKWMAVKPLS
Trigger: CGACAAGGGCTTCACTGCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CAA 72 bp CTCTACCAGGACCTGCAGGCATGCAAGCTTGCCCCATaGGGCGGCGAAGTGGATGGCAGTGAAGCCCTTGTC +
Preference number: 6 (lower is better)
Translates to: LYQDLQACKLAP*GGEVDGSEALV
Trigger: GACAAGGGCTTCACTGCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CAA 90 bp AGGTGGCCTTCAAGGAGACTTTGTTCGCCTGCTGCATGGAGCCACTaGGAGTTGGCTGCGGCCGAGCACCTCTCCCTTCTCCCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: RWPSRRLCSPAAWSH*ELAAAEHLSLLPFL
Trigger: CAGAAAGGGGAGAAGGGAGAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS GCA 72 bp TCAGTCCAGGTGGCCTTCAAGGAGACTTTGTTCGCCTaGTGCATGGAGCCACTTGGAGTTGGCTGCGGCCGA +
Preference number: 6 (lower is better)
Translates to: SVQVAFKETLFA*CMEPLGVGCGR
Trigger: TCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCTGGACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS GCA 72 bp GGCTCTGGTTCAGACAGAATCGCAGCCATTCCACGTTaGCCACAGCCGCTGCGAACAGCTGGTAGTAGCTCC +
Preference number: 6 (lower is better)
Translates to: GSGSDRIAAIPR*PQPLRTAGSSS
Trigger: GGAGCTACTACCAGCTGTTCGCAGCGGCTGTGGGCAACGTGGAATGGCTGCGATTCTGTCTGAACCAGAGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000483334.1
ENST00000496088.1
CDS GCA 72 bp GGGAAACTTGTACTCCTCTACCAGGACCTGCAGGCATaGAAGCTTGCCCCATTGGGCGGCGAAGTGGATGGC +
Preference number: 6 (lower is better)
Translates to: GKLVLLYQDLQA*KLAPLGGEVDG
Trigger: GCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGAGGAGTACAAGTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CAA 72 bp TCAAGGAGACTTTGTTCGCCTGCTGCATGGAGCCACTaGGAGTTGGCTGCGGCCGAGCACCTCTCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: SRRLCSPAAWSH*ELAAAEHLSLL
Trigger: GAGAAGGGAGAGGTGCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS CAA 72 bp GACTCCGCGTCAGTCCAGGTGGCCTTCAAGGAGACTTaGTTCGCCTGCTGCATGGAGCCACTTGGAGTTGGC +
Preference number: 6 (lower is better)
Translates to: DSASVQVAFKET*FACCMEPLGVG
Trigger: GCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCTGGACTGACGCGGAGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
CDS CAA 90 bp ACGGGAAACTTGTACTCCTCTACCAGGACCTGCAGGCATGCAAGCTaGCCCCATTGGGCGGCGAAGTGGATGGCAGTGAAGCCCTTGTCG +
Preference number: 6 (lower is better)
Translates to: TGNLYSSTRTCRHAS*PHWAAKWMAVKPLS
Trigger: CGACAAGGGCTTCACTGCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGAGGAGTACAAGTTTCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CCA 72 bp AAGCCCTTGTCGTCGGTGGGGATTTCCCTGAGGCTCTaGTTCAGACAGAATCGCAGCCATTCCACGTTGCCC +
Preference number: 6 (lower is better)
Translates to: KPLSSVGISLRL*FRQNRSHSTLP
Trigger: GGGCAACGTGGAATGGCTGCGATTCTGTCTGAACCAGAGCCTCAGGGAAATCCCCACCGACGACAAGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CCA 72 bp TGGGTTTGTAGCCCATGGCATCTTGGGCATGGACGTTaGCGCCACTCTGCACCAGGACCTTCACACAGTCCA +
Preference number: 6 (lower is better)
Translates to: WVCSPWHLGHGR*RHSAPGPSHSP
Trigger: TGGACTGTGTGAAGGTCCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAGATGCCATGGGCTACAAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS CAA 72 bp TTGTACTCCTCTACCAGGACCTGCAGGCATGCAAGCTaGCCCCATTGGGCGGCGAAGTGGATGGCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: LYSSTRTCRHAS*PHWAAKWMAVK
Trigger: CTTCACTGCCATCCACTTCGCCGCCCAATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGAGGAGTACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CAA 90 bp TGCAGGGGTGTCTGGCTATTGTTGGTCAGCAGGTCCACGGGAAACTaGTACTCCTCTACCAGGACCTGCAGGCATGCAAGCTTGCCCCAT +
Preference number: 6 (lower is better)
Translates to: CRGVWLLLVSRSTGN*YSSTRTCRHASLPH
Trigger: ATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGAGGAGTACAAGTTTCCCGTGGACCTGCTGACCAACAATAGCCAGACACCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CAA 90 bp GTGTTGTCCCTGTGGATGACGAGGTGCAGGGGTGTCTGGCTATTGTaGGTCAGCAGGTCCACGGGAAACTTGTACTCCTCTACCAGGACC +
Preference number: 6 (lower is better)
Translates to: VLSLWMTRCRGVWLL*VSRSTGNLYSSTRT
Trigger: GGTCCTGGTAGAGGAGTACAAGTTTCCCGTGGACCTGCTGACCAACAATAGCCAGACACCCCTGCACCTCGTCATCCACAGGGACAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CCA 72 bp GTGTTGTCCCTGTGGATGACGAGGTGCAGGGGTGTCTaGCTATTGTTGGTCAGCAGGTCCACGGGAAACTTG +
Preference number: 6 (lower is better)
Translates to: VLSLWMTRCRGV*LLLVSRSTGNL
Trigger: CAAGTTTCCCGTGGACCTGCTGACCAACAATAGCCAGACACCCCTGCACCTCGTCATCCACAGGGACAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CCA 72 bp AGAACCTTGTCGTCGGTGGGGATTTCCCTGAGGCTCTaGTTCAGACAGAATCGCAGCCATTCCACGTTGCCC +
Preference number: 6 (lower is better)
Translates to: RTLSSVGISLRL*FRQNRSHSTLP
Trigger: GGGCAACGTGGAATGGCTGCGATTCTGTCTGAACCAGAGCCTCAGGGAAATCCCCACCGACGACAAGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483334.1
CDS CAA 72 bp GTCTGGCTATTGTTGGTCAGCAGGTCCACGGGAAACTaGTACTCCTCTACCAGGACCTGCAGGCATGCAAGC +
Preference number: 6 (lower is better)
Translates to: VWLLLVSRSTGN*YSSTRTCRHAS
Trigger: GCTTGCATGCCTGCAGGTCCTGGTAGAGGAGTACAAGTTTCCCGTGGACCTGCTGACCAACAATAGCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000441349.5
ENST00000457410.5
ENST00000496088.1
CDS CAA 72 bp TTTGCAGAAGTCAATGGGTTTGTAGCCCATGGCATCTaGGGCATGGACGTTGGCGCCACTCTGCACCAGGAC +
Preference number: 6 (lower is better)
Translates to: FAEVNGFVAHGI*GMDVGATLHQD
Trigger: GTCCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAGATGCCATGGGCTACAAACCCATTGACTTCTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS TCA 72 bp ATCCTTCAAGAACCTTGTCGTCGGTGGGGATTTCCCTaGGGCTCTGGTTCAGACAGAATCGCAGCCATTCCA +
Preference number: 6 (lower is better)
Translates to: ILQEPCRRWGFP*GSGSDRIAAIP
Trigger: TGGAATGGCTGCGATTCTGTCTGAACCAGAGCCTCAGGGAAATCCCCACCGACGACAAGGTTCTTGAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483334.1
CDS CAA 90 bp GTTCCATATTTTGCAGAAGTCAATGGGTTTGTAGCCCATGGCATCTaGGGCATGGACGTTGGCGCCACTCTGCACCAGGACCTTCACACA +
Preference number: 6 (lower is better)
Translates to: VPYFAEVNGFVAHGI*GMDVGATLHQDLHT
Trigger: TGTGTGAAGGTCCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAGATGCCATGGGCTACAAACCCATTGACTTCTGCAAAATATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS TCA 72 bp GTAGAGAAATGTCCTGCCATAGGAGAGTCTCTGGTGTaGTGGGGGAAAAGGCAAATGGGAAGTGCACACTGC +
Preference number: 6 (lower is better)
Translates to: VEKCPAIGESLV*WGKRQMGSAHC
Trigger: GCAGTGTGCACTTCCCATTTGCCTTTTCCCCCATCACACCAGAGACTCTCCTATGGCAGGACATTTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000441349.5
ENST00000460927.1
CDS CCA 72 bp TCCATATTTTGCAGAAGTCAATGGGTTTGTAGCCCATaGCATCTTGGGCATGGACGTTGGCGCCACTCTGCA +
Preference number: 6 (lower is better)
Translates to: SIFCRSQWVCSP*HLGHGRWRHSA
Trigger: TGCAGAGTGGCGCCAACGTCCATGCCCAAGATGCCATGGGCTACAAACCCATTGACTTCTGCAAAATATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS GCA 72 bp TCAAGAACCGGGCACAGGCACGGTGGTTCCATATTTTaGAGAAGTCAATGGGTTTGTAGCCCATGGCATCTT +
Preference number: 6 (lower is better)
Translates to: SRTGHRHGGSIF*RSQWVCSPWHL
Trigger: AAGATGCCATGGGCTACAAACCCATTGACTTCTGCAAAATATGGAACCACCGTGCCTGTGCCCGGTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS CAA 90 bp CTCTTGAACATCTTCATTTTCGTCATCTCACGGGCAAAGTCCTTCTaGTCCTTTTTCCACATGGCATCCTTCAAGAACCGGGCACAGGCA +
Preference number: 6 (lower is better)
Translates to: LLNIFIFVISRAKSF*SFFHMASFKNRAQA
Trigger: TGCCTGTGCCCGGTTCTTGAAGGATGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCGTGAGATGACGAAAATGAAGATGTTCAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS CAA 90 bp CTCTTGAACATCTTCATTTTCGTCATCTCACGGGCAAAGTCCTTCTaGTCCTTTTTCCACATGGCATCCTTCAAGAACCTGGTGCCAAGG +
Preference number: 6 (lower is better)
Translates to: LLNIFIFVISRAKSF*SFFHMASFKNLVPR
Trigger: CCTTGGCACCAGGTTCTTGAAGGATGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCGTGAGATGACGAAAATGAAGATGTTCAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460927.1
CDS CAA 90 bp CTCTTGAACATCTTCATTTTCGTCATCTCACGGGCAAAGTCCTTCTaGTCCTTTTTCCACATGGCATCCTTCAAGAACCTTGTCGTCGGT +
Preference number: 6 (lower is better)
Translates to: LLNIFIFVISRAKSF*SFFHMASFKNLVVG
Trigger: ACCGACGACAAGGTTCTTGAAGGATGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCGTGAGATGACGAAAATGAAGATGTTCAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483334.1
CDS CAA 72 bp ATCTTCATTTTCGTCATCTCACGGGCAAAGTCCTTCTaGTCCTTTTTCCACATGGCATCCTTCAAGAACCGG +
Preference number: 6 (lower is better)
Translates to: IFIFVISRAKSF*SFFHMASFKNR
Trigger: CCGGTTCTTGAAGGATGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCGTGAGATGACGAAAATGAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272421.10
ENST00000360589.4
ENST00000457410.5
CDS CAA 90 bp CTCTTGAACATCTTCATTTTCGTCATCTCACGGGCAAAGTCCTTCTaGTCCTTTTTCCACATGGCATCCTTCAAGAACGCATTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: LLNIFIFVISRAKSF*SFFHMASFKNALRS
Trigger: AGACCTCAATGCGTTCTTGAAGGATGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCGTGAGATGACGAAAATGAAGATGTTCAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441349.5
CDS CAA 72 bp ATCTTCATTTTCGTCATCTCACGGGCAAAGTCCTTCTaGTCCTTTTTCCACATGGCATCCTTCAAGAACGCA +
Preference number: 6 (lower is better)
Translates to: IFIFVISRAKSF*SFFHMASFKNA
Trigger: TGCGTTCTTGAAGGATGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCGTGAGATGACGAAAATGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441349.5
CDS CAA 72 bp ATCTTCATTTTCGTCATCTCACGGGCAAAGTCCTTCTaGTCCTTTTTCCACATGGCATCCTTCAAGAACCTG +
Preference number: 6 (lower is better)
Translates to: IFIFVISRAKSF*SFFHMASFKNL
Trigger: CAGGTTCTTGAAGGATGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCGTGAGATGACGAAAATGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460927.1
CDS CAA 72 bp ATCTTCATTTTCGTCATCTCACGGGCAAAGTCCTTCTaGTCCTTTTTCCACATGGCATCCTTCAAGAACCTT +
Preference number: 6 (lower is better)
Translates to: IFIFVISRAKSF*SFFHMASFKNL
Trigger: AAGGTTCTTGAAGGATGCCATGTGGAAAAAGGACAAGAAGGACTTTGCCCGTGAGATGACGAAAATGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483334.1