Pregenerated sensors for ANKRD49 (Homo sapiens)
Ensembl gene IDs: ENSG00000168876Ensembl transcript IDs: ENST00000541144.1, ENST00000544253.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGCGGCCCCCTGTGCAATaGGCTCCTGAACAATATCTA | + |
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Preference number: 2 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGRPPVQ*APEQYL Trigger: TAGATATTGTTCAGGAGCTCATTGCACAGGGGGCCG...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| 3UTR-3UTR GCA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGAACATCGGCCCCCTGTaGAATGAGCTCCTGAACAAT | + |
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Preference number: 2 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGNIGPL*NELLNN Trigger: ATTGTTCAGGAGCTCATTGCACAGGGGGCCGATGTT...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| 3UTR TCA 72 bp | AGTTTACTAACACAGACATGGGGAAACTTAGTAAAATaGGGTGGAAGTGGCCAAGCAGAGGGAATAGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: SLLTQTWGNLVK*GGSGQAEGIGF Trigger: AAAGCCTATTCCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTTAGTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR CCA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGCTTAGTAAAATGAGGTaGAAGTGGCCAAGCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGLSKMR*KWPSRG Trigger: CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAG...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR TCA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGTCTACAAGGTCATCGTaGTTCGCCATTAGCTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGSTRSS*FAISLR Trigger: CCTTAAGCTAATGGCGAATCACGATGACCTTGTAGA...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR TCA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGGGAAACTTAGTAAAATaGGGTGGAAGTGGCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGGNLVK*GGSGQA Trigger: TGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCC...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR CCA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGTGTTCTATGGGCCTCTaGTTAAATGTGGCATGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGCSMGL*LNVACS Trigger: AGAGCATGCCACATTTAACCAGAGGCCCATAGAACA...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR TCA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGGAGGGAATAGGCTTTTaGTGTTCATTCCACTTCGAT | + |
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Preference number: 4 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGEGIGF*CSFHFD Trigger: ATCGAAGTGGAATGAACATCAAAAGCCTATTCCCTC...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR TCA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGGGAGGAGAGGACTACTaGTTTAAGAATGAACAAGTT | + |
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Preference number: 4 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGGGEDY*FKNEQV Trigger: AACTTGTTCATTCTTAAATCAGTAGTCCTCTCCTCC...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR GCA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGTGGTTAAATGTGGCATaGTCTTGGGTTAAAAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGWLNVA*SWVKKL Trigger: TAGCTTTTTAACCCAAGAGCATGCCACATTTAACCA...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR CCA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGGTACATTGTCTCATTTaGTCCTCACAATCAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGVHCLI*SSQSRD Trigger: ATCTCTTGATTGTGAGGACCAAATGAGACAATGTAC...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR GCA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGTTGCAGCTTAATATGTaGTTTCATGTACATTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGLQLNM*FHVHCL Trigger: GAGACAATGTACATGAAAGCACATATTAAGCTGCAA...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS GCA 90 bp | ACTGCTTTGTTCATCAAGATCTGGGGACCACGAAGCGGCCTGACCTaGAGGGCTCGGCCTGTGTCCACAGGCTACCCACCCCCACGGGCT | + |
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Preference number: 5 (lower is better) Translates to: TALFIKIWGPRSGLT*RARPVSTGYPPPRA Trigger: AGCCCGTGGGGGTGGGTAGCCTGTGGACACAGGCCGAGCCCTGCAGGTCAGGCCGCTTCGTGGTCCCCAGATCTTGATGAACAAAGCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541144.1 |
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| CDS CCA 90 bp | TGTGTCCACAGGCTACCCACCCCCACGGGCTCAGGAGTTCTTAGATaGCGCCGGTCCATCAAAAAGCGAGGTCCGGGACAGGGAATAACA | + |
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Preference number: 5 (lower is better) Translates to: CVHRLPTPTGSGVLR*RRSIKKRGPGQGIT Trigger: TGTTATTCCCTGTCCCGGACCTCGCTTTTTGATGGACCGGCGCCATCTAAGAACTCCTGAGCCCGTGGGGGTGGGTAGCCTGTGGACACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000541144.1 |
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| CDS-3UTR CAA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGAGAGGGAATAGGCTTTaGATGTTCATTCCACTTCGA | + |
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Preference number: 5 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGRGNRL*MFIPLR Trigger: TCGAAGTGGAATGAACATCAAAAGCCTATTCCCTCT...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR CAA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGGTGCTTTCATGTACATaGTCTCATTTGGTCCTCACA | + |
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Preference number: 5 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGVLSCT*SHLVLT Trigger: TGTGAGGACCAAATGAGACAATGTACATGAAAGCAC...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR CAA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGTTTTCCCCTGTCACTTaGCCTGTATACTCTGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGFSPVT*PVYSVK Trigger: TTTTACAGAGTATACAGGCAAAGTGACAGGGGAAAA...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS-3UTR CAA 90 bp | AACACAGACATGGGGAAACTTAGTAAAATGAGGTGGAAGTGGCCAAGCAGAGGGGTTGTAATTTTCAGTTaGTTCTATGGGCCTCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: NTDMGKLSKMRWKWPSRGVVIFS*FYGPLV Trigger: AACCAGAGGCCCATAGAACAAACTGAAAATTACAAC...CCCTCTGCTTGGCCACTTCCACCTCATTTTACTAAGTTTCCCCATGTCTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000544253.1 |
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| CDS CCA 72 bp | AGGCTACCCACCCCCACGGGCTCAGGAGTTCTTAGATaGCGCCGGTCCATCAAAAAGCGAGGTCCGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: RLPTPTGSGVLR*RRSIKKRGPGQ Trigger: CTGTCCCGGACCTCGCTTTTTGATGGACCGGCGCCATCTAAGAACTCCTGAGCCCGTGGGGGTGGGTAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000541144.1 |
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