Pregenerated sensors for ANKRD44-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000236977

Ensembl transcript IDs: ENST00000428191.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AGCAGAGAGCCCCAGCAGAGCTATGCTGTATCATTGCTATGTAGATaGAGCTCATTAAACACCCCTCGATTGCTTGAATACATGGGAGAT	+
Preference number: 5 (lower is better) Translates to: SREPQQSYAVSLLCR*SSLNTPRLLEYMGD Trigger: ATCTCCCATGTATTCAAGCAATCGAGGGGTGTTTAATGAGCTCCATCTACATAGCAATGATACAGCATAGCTCTGCTGGGGCTCTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428191.1
CDS CCA 90 bp	AAGCATGATTCTTGTCTTGTCTCCTTGTTCCCAATTCTTTCTGTCTaGTTTCTATTTTATTGTGCCTGTTCTTACCTGTCCTTCCCTTTT	+
Preference number: 5 (lower is better) Translates to: KHDSCLVSLFPILSV*FLFYCACSYLSFPF Trigger: AAAAGGGAAGGACAGGTAAGAACAGGCACAATAAAATAGAAACCAGACAGAAAGAATTGGGAACAAGGAGACAAGACAAGAATCATGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428191.1
CDS CCA 72 bp	ATAATGGCATTTGCAGCAACCATCTCTAGCCATCTCTaGCCATCTCTCTGGCCAGGCTGGTCTCGAACTCCT	+
Preference number: 6 (lower is better) Translates to: IMAFAATISSHL*PSLWPGWSRTP Trigger: AGGAGTTCGAGACCAGCCTGGCCAGAGAGATGGCCAGAGATGGCTAGAGATGGTTGCTGCAAATGCCATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428191.1
CDS CAA 72 bp	GAGAGCAGAGAGCCCCAGCAGAGCTATGCTGTATCATaGCTATGTAGATGGAGCTCATTAAACACCCCTCGA	+
Preference number: 6 (lower is better) Translates to: ESREPQQSYAVS*LCRWSSLNTPR Trigger: TCGAGGGGTGTTTAATGAGCTCCATCTACATAGCAATGATACAGCATAGCTCTGCTGGGGCTCTCTGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428191.1
CDS CAA 90 bp	GGAAGGAGACCAGTCAGAGGCTGCTGTTATAACCCAAGTGGTGATTaGGCCAGGTGGCAGCCAGTGAAAAATACAGCCAAAAAGATGACA	+
Preference number: 6 (lower is better) Translates to: GRRPVRGCCYNPSGD*ARWQPVKNTAKKMT Trigger: TGTCATCTTTTTGGCTGTATTTTTCACTGGCTGCCACCTGGCCAAATCACCACTTGGGTTATAACAGCAGCCTCTGACTGGTCTCCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000428191.1
CDS TCA 72 bp	TTCCCCTGGGTGAAACTGGAAGTTTTTGAGCAGGAGTaGCAAGTTCTGAGTTCCATCACTCTGAGAGCTACG	+
Preference number: 6 (lower is better) Translates to: FPWVKLEVFEQE*QVLSSITLRAT Trigger: CGTAGCTCTCAGAGTGATGGAACTCAGAACTTGTCACTCCTGCTCAAAAACTTCCAGTTTCACCCAGGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428191.1
CDS CCA 72 bp	GGCTGCTGTTATAACCCAAGTGGTGATTTGGCCAGGTaGCAGCCAGTGAAAAATACAGCCAAAAAGATGACA	+
Preference number: 6 (lower is better) Translates to: GCCYNPSGDLAR*QPVKNTAKKMT Trigger: TGTCATCTTTTTGGCTGTATTTTTCACTGGCTGCCACCTGGCCAAATCACCACTTGGGTTATAACAGCAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000428191.1
CDS CCA 72 bp	CCCCAGCAGAGCTATGCTGTATCATTGCTATGTAGATaGAGCTCATTAAACACCCCTCGATTGCTTGAATAC	+
Preference number: 6 (lower is better) Translates to: PQQSYAVSLLCR*SSLNTPRLLEY Trigger: GTATTCAAGCAATCGAGGGGTGTTTAATGAGCTCCATCTACATAGCAATGATACAGCATAGCTCTGCTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428191.1
CDS CAA 90 bp	GCTGTATCATTGCTATGTAGATGGAGCTCATTAAACACCCCTCGATaGCTTGAATACATGGGAGATCCACTCTTAGAACATTTAGGGACA	+
Preference number: 6 (lower is better) Translates to: AVSLLCRWSSLNTPR*LEYMGDPLLEHLGT Trigger: TGTCCCTAAATGTTCTAAGAGTGGATCTCCCATGTATTCAAGCAATCGAGGGGTGTTTAATGAGCTCCATCTACATAGCAATGATACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428191.1

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