RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD44 (Homo sapiens)

Ensembl gene IDs: ENSG00000065413

Ensembl transcript IDs: ENST00000282272.15, ENST00000328737.6, ENST00000409153.5, ENST00000409919.5, ENST00000422886.5, ENST00000424317.5, ENST00000443014.1, ENST00000447713.1, ENST00000463879.1, ENST00000473081.1, ENST00000477852.1, ENST00000647377.1

Found 1016 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCGGTCGGAGACATTGACACTGCTCAGCAGGGGAATGATCACTTCTaGACATTTGACAGCCTTGTTGGCTGCTGCCACATGAAGAGGGGT +
Preference number: 1 (lower is better)
Translates to: SVGDIDTAQQGNDHF*TFDSLVGCCHMKRG
Trigger: ACCCCTCTTCATGTGGCAGCAGCCAACAAGGCTGTCAAATGTGCAGAAGTGATCATTCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
3UTR GCA 90 bp CAAAACTGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTaGCCTCCCTCGATTAATTCCTTCTCTACTAGCTTCTGGAAGCCC +
Preference number: 1 (lower is better)
Translates to: QNWGHLCDCSTQQPH*PPSINSFSTSFWKP
Trigger: GGGCTTCCAGAAGCTAGTAGAGAAGGAATTAATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCAGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR GCA 90 bp CAGGGGAATGATCACTTCTGCACATTTGACAGCCTTGTTGGCTGCTaGCACATGAAGAGGGGTCTGCCAGTTCTTGTCCCTTGCATTGAC +
Preference number: 1 (lower is better)
Translates to: QGNDHFCTFDSLVGC*HMKRGLPVLVPCID
Trigger: GTCAATGCAAGGGACAAGAACTGGCAGACCCCTCTTCATGTGGCAGCAGCCAACAAGGCTGTCAAATGTGCAGAAGTGATCATTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
3UTR TCA 90 bp AGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGAAGAACCTaGGGGTCATCTGGAAACCTTAGCAGTGGAAATGCTAGGTTTGGC +
Preference number: 1 (lower is better)
Translates to: SSRRCVALSNQRGRT*GSSGNLSSGNARFG
Trigger: GCCAAACCTAGCATTTCCACTGCTAAGGTTTCCAGATGACCCTCAGGTTCTTCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR TCA 90 bp ATGATCACTTCTGCACATTTGACAGCCTTGTTGGCTGCTGCCACATaGAGAGGGGTCTGCCAGTTCTTGTCCCTTGCATTGACATCAGCT +
Preference number: 1 (lower is better)
Translates to: MITSAHLTALLAAAT*RGVCQFLSLALTSA
Trigger: AGCTGATGTCAATGCAAGGGACAAGAACTGGCAGACCCCTCTTCATGTGGCAGCAGCCAACAAGGCTGTCAAATGTGCAGAAGTGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
3UTR GCA 90 bp GCTCCTGCAGAGTGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTaGATTCTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAG +
Preference number: 1 (lower is better)
Translates to: APAECNPLRSVAGIK*ILIHNWSLRVPVLQ
Trigger: CTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTCTGCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR CCA 90 bp CCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTaGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTGGA +
Preference number: 1 (lower is better)
Translates to: PLRSVAGIKCILIHN*SLRVPVLQPTDVLG
Trigger: TCCAAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR TCA 90 bp GCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTATATCGATaGCTACCATGCTTTTGTGCTGTGCTTAAAAGCCTTGGGTGGTGG +
Preference number: 1 (lower is better)
Translates to: AMLVLGGRNGTALYR*LPCFCAVLKSLGWW
Trigger: CCACCACCCAAGGCTTTTAAGCACAGCACAAAAGCATGGTAGTCATCGATATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR TCA 90 bp TTCTTCTTTTTGTACAGCGGTTCCAGGTGTGGAACGGGGTCCATTTaGCCTAGAAGCTTTGGCAGAGGGAGCAGACACAGTATTCACTAT +
Preference number: 1 (lower is better)
Translates to: FFFLYSGSRCGTGSI*PRSFGRGSRHSIHY
Trigger: ATAGTGAATACTGTGTCTGCTCCCTCTGCCAAAGCTTCTAGGTCAAATGGACCCCGTTCCACACCTGGAACCGCTGTACAAAAAGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR GCA 90 bp AGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTaGTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTT +
Preference number: 1 (lower is better)
Translates to: RNFQYLVPSWKIKGA*FPITDRQGESGYSL
Trigger: AAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR GCA 90 bp AAAGAGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTaGGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTC +
Preference number: 1 (lower is better)
Translates to: KEEFPVSCSQLENKG*VLPNHRQARRIRLL
Trigger: GAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR GCA 90 bp AGAGGGGTCTGCCAGTTCTTGTCCCTTGCATTGACATCAGCTGAGTaGTTAATCAAAACCTGTACTGCTTCTTCACTTCTGGAAGCAACA +
Preference number: 1 (lower is better)
Translates to: RGVCQFLSLALTSAE*LIKTCTASSLLEAT
Trigger: TGTTGCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAACTGGCAGACCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
3UTR CCA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATaGTACTGCCTTATATCGATGACTACCATGCTTTTGTGCTGTGCT +
Preference number: 1 (lower is better)
Translates to: VYTNFHGNAGVRRQK*YCLISMTTMLLCCA
Trigger: AGCACAGCACAAAAGCATGGTAGTCATCGATATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR TCA 90 bp CGCAGCTCCATGGAGATAACGTCTCATGGTGAGTCACTGCTTTGCTaGAATGATTCTTGTACTCTCTGCTACACGACAGGAAAAATGTTA +
Preference number: 1 (lower is better)
Translates to: RSSMEITSHGESLLC*NDSCTLCYTTGKML
Trigger: TAACATTTTTCCTGTCGTGTAGCAGAGAGTACAAGAATCATTTCAGCAAAGCAGTGACTCACCATGAGACGTTATCTCCATGGAGCTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR TCA 90 bp CTTAGGGTAATTTCTAGATATTTCTTTGTGCTGCCTTTGTGTATATaGTCCACTACACATCTGAGTTTTCATCTCGCAGAAGGGCATCCA +
Preference number: 1 (lower is better)
Translates to: LRVISRYFFVLPLCI*STTHLSFHLAEGHP
Trigger: TGGATGCCCTTCTGCGAGATGAAAACTCAGATGTGTAGTGGATCATATACACAAAGGCAGCACAAAGAAATATCTAGAAATTACCCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR TCA 90 bp ATGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTaGTGTAATGAACAGTTCATTGTGAGCATGATTTCATTTCGTTCC +
Preference number: 1 (lower is better)
Translates to: MGEREREEEREREIS*CNEQFIVSMISFRS
Trigger: GGAACGAAATGAAATCATGCTCACAATGAACTGTTCATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR CCA 90 bp GGAGCAGACACAGTATTCACTATGTTGATTTCATCATCAAGCAACTaGCAATCGGTTTTACATGCTAAATCACCCATTTCTACTTTCTGC +
Preference number: 1 (lower is better)
Translates to: GADTVFTMLISSSSN*QSVLHAKSPISTFC
Trigger: GCAGAAAGTAGAAATGGGTGATTTAGCATGTAAAACCGATTGCCAGTTGCTTGATGATGAAATCAACATAGTGAATACTGTGTCTGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR CCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTGTCCTCATGTGTAGCTaGCTGATGAACTACACACAC +
Preference number: 2 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSIVLMCS*LMNYTH
Trigger: GTGTGTGTAGTTCATCAGCCAGCTACACATGAGGAC...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR GCA 90 bp TGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCAGGGTGCCTGTTTTaGAGCCAACCGATGTTCTTG +
Preference number: 2 (lower is better)
Translates to: CVLPNHRQARRIRLLPFPSGCLF*SQPMFL
Trigger: CAAGAACATCGGTTGGCTGCAAAACAGGCACCCTGA...AGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR-3UTR GCA 90 bp GACATTGACACTGCTCAGCAGGGGAATGATCACTTCTGCACATTTGACAGCCTTGAAGCAACAGCCCGGTaGAGTGGAGTCAGCCACATG +
Preference number: 2 (lower is better)
Translates to: DIDTAQQGNDHFCTFDSLEATAR*SGVSHM
Trigger: CATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTC...AAGGCTGTCAAATGTGCAGAAGTGATCATTCCCCTGCTGAGCAGTGTCAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
3UTR-3UTR CCA 90 bp GAGACATTGACACTGCTCAGCAGGGGAATGATCACTTCTGCACATTTGACAGCCAACAGCCCGGTGCAGTaGAGTCAGCCACATGTTGTC +
Preference number: 2 (lower is better)
Translates to: ETLTLLSRGMITSAHLTANSPVQ*SQPHVV
Trigger: GACAACATGTGGCTGACTCCACTGCACCGGGCTGTT...GGCTGTCAAATGTGCAGAAGTGATCATTCCCCTGCTGAGCAGTGTCAATGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
3UTR-3UTR GCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGACTGAGCAGTAGAAGATaGGTAGCCCTCTCTAACCAA +
Preference number: 2 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGLSSRR*VALSNQ
Trigger: TTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAG...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp AAAGCCTTCACTCTGCCACTGATTACCACACACACACACACACACACACACACAGGTGGGGCTCTAACCTaGAATGGAAGGCAGCATGGT +
Preference number: 2 (lower is better)
Translates to: KAFTLPLITTHTHTHTHTGGALT*NGRQHG
Trigger: ACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGGTAATCAGTGGCAGAGTGAAGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR-3UTR TCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGAGATAACGTCTCATGGTaGGTCACTGCTTTGCTGAAA +
Preference number: 2 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGDNVSW*VTALLK
Trigger: TTTCAGCAAAGCAGTGACTCACCATGAGACGTTATC...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CCA 90 bp AAAGCCTTCACTCTGCCACTGATTACCACACACACACACACACACACACACACAAAAAGCCTTGGGTGGTaGTGGGGCTCTAACCTGCAA +
Preference number: 2 (lower is better)
Translates to: KAFTLPLITTHTHTHTHTKSLGW*WGSNLQ
Trigger: TTGCAGGTTAGAGCCCCACCACCACCCAAGGCTTTT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGGTAATCAGTGGCAGAGTGAAGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR-3UTR CCA 90 bp TGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTATTCTGATTCATAATTaGTCCCTCAGGGTGCCTGTT +
Preference number: 2 (lower is better)
Translates to: CVLPNHRQARRIRLLPFPILIHN*SLRVPV
Trigger: AACAGGCACCCTGAGGGACCAATTATGAATCAGAAT...AGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR-3UTR CCA 90 bp TGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTTTGCGTTCTGTGGCTaGGATAAAGTGCATTCTGAT +
Preference number: 2 (lower is better)
Translates to: CVLPNHRQARRIRLLPFPFAFCG*DKVHSD
Trigger: ATCAGAATGCACTTTATCCCAGCCACAGAACGCAAA...AGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR-3UTR TCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGCTGGGGCCATCTGTGTaGCTGTTCCACCCAACAGCC +
Preference number: 2 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVLGPSV*LFHPTA
Trigger: GGCTGTTGGGTGGAACAGTCACACAGATGGCCCCAG...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACCACCGCAGCATATTGTaGTTCTTCAACACTGAACCT +
Preference number: 2 (lower is better)
Translates to: RRRASRLQCLLSSKLATDHRSIL*FFNTEP
Trigger: AGGTTCAGTGTTGAAGAAGCACAATATGCTGCGGTG...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp CCCTCGGTCGGAGACATTGACACTGCTCAGCAGGGGAATGATCACTTCTGCACAAATCAAAACCTGTACTaGTTCTTCACTTCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: PSVGDIDTAQQGNDHFCTNQNLY*FFTSGS
Trigger: GCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGATT...TGTGCAGAAGTGATCATTCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
3UTR-3UTR GCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGAGATTCTTGTACTCTCTaGTACACGACAGGAAAAATG +
Preference number: 2 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGDSCTL*YTTGKM
Trigger: CATTTTTCCTGTCGTGTAGCAGAGAGTACAAGAATC...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp GAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATATTGGTCCCTCAGGGTaGCTGTTTTGCAGCCAACCG +
Preference number: 2 (lower is better)
Translates to: EFPVSCSQLENKGCVLPNIGPSG*LFCSQP
Trigger: CGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAAT...ATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR-3UTR CCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGTGGCCCTTGGGCTTTTaGCTAGCCCAGGGTCAAGTG +
Preference number: 2 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTWPLGF*LAQGQV
Trigger: CACTTGACCCTGGGCTAGCCAAAAGCCCAAGGGCCA...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACGAAACAAAACAAAACTaGGGCCATCTGTGTGACTGT +
Preference number: 2 (lower is better)
Translates to: RRRASRLQCLLSSKLATDETKQN*GHLCDC
Trigger: ACAGTCACACAGATGGCCCCAGTTTTGTTTTGTTTC...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR TCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACTTCTCATCAGGTTACTaGGACTATGTGAGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: RRRASRLQCLLSSKLATDFSSGY*DYVSFS
Trigger: TGAAAAGCTCACATAGTCTCAGTAACCTGATGAGAA...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCATGCTTTTGTGCTGTaGTTAAAAGCCTTGGGTGGT +
Preference number: 2 (lower is better)
Translates to: VYTNFHGNAGVRRQKWYCHAFVL*LKALGG
Trigger: ACCACCCAAGGCTTTTAAGCACAGCACAAAAGCATG...GCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR-3UTR CCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGGCTGGCTACAGACTGTaGCTGAGCAGTAGAAGATGC +
Preference number: 2 (lower is better)
Translates to: WEKEKERKRERERSVDVMAGYRL*LSSRRC
Trigger: GCATCTTCTACTGCTCAGCCACAGTCTGTAGCCAGC...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCAGCGGTTCCAGGTGTaGAACGGGGTCCATTTGACC +
Preference number: 2 (lower is better)
Translates to: FQGGNGTHYKTSESTALIQRFQV*NGVHLT
Trigger: GGTCAAATGGACCCCGTTCCACACCTGGAACCGCTG...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR CCA 90 bp AAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCAAGCCTTGGGTGGTGGTaGGGCTCTAACCTGCAATGG +
Preference number: 2 (lower is better)
Translates to: KYILEGRLIICSDSRKPSSLGWW*GSNLQW
Trigger: CCATTGCAGGTTAGAGCCCCACCACCACCCAAGGCT...TGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR-3UTR CCA 90 bp AAAGCCTTCACTCTGCCACTGATTACCACACACACACACACACACACACACACAGTTAGGAGGCAGAAATaGTACTGCCTTATATCGATG +
Preference number: 2 (lower is better)
Translates to: KAFTLPLITTHTHTHTHTVRRQK*YCLISM
Trigger: CATCGATATAAGGCAGTACCATTTCTGCCTCCTAAC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGGTAATCAGTGGCAGAGTGAAGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR-3UTR TCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTCAACGCGGAAGAACCTaGGGGTCATCTGGAAACCTT +
Preference number: 2 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSQRGRT*GSSGNL
Trigger: AAGGTTTCCAGATGACCCTCAGGTTCTTCCGCGTTG...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR TCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTGGAACGGGGTCCATTTaGCCTAGAAGCTTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: FQGGNGTHYKTSESTALIGTGSI*PRSFGR
Trigger: TCTGCCAAAGCTTCTAGGTCAAATGGACCCCGTTCC...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR GCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTACCCAACAGCCTCACTaGCCTCCCTCGATTAATTCC +
Preference number: 2 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTTQQPH*PPSINS
Trigger: GGAATTAATCGAGGGAGGGCAGTGAGGCTGTTGGGT...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR GCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAACAGCTGCCTCTCTGCTaGATTATCCCCAAAGAACAG +
Preference number: 2 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEQLPLC*IIPKEQ
Trigger: CTGTTCTTTGGGGATAATGCAGCAGAGAGGCAGCTG...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGTCCTTTTGGCACATGTaGCCACACACTGCCATCATT +
Preference number: 2 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTSFWHM*PHTAII
Trigger: AATGATGGCAGTGTGTGGGCACATGTGCCAAAAGGA...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp GTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACAGACAGGTGGCTGGGATAAAGTaGATTCTGATTCATAATTGG +
Preference number: 2 (lower is better)
Translates to: VSCSQLENKGCVLPNHRQVAGIK*ILIHNW
Trigger: CCAATTATGAATCAGAATGCACTTTATCCCAGCCAC...CTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR-3UTR GCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAATTCATAGCGAACAGCTaGCTCTCTGCTGCATTATCC +
Preference number: 2 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEFIANS*LSAALS
Trigger: GGATAATGCAGCAGAGAGGCAGCTGTTCGCTATGAA...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR CAA 90 bp GACCTAGAAGCTTTGGCAGAGGGAGCAGACACAGTATTCACTATGTaGATTTCATCATCAAGCAACTGGCAATCGGTTTTACATGCTAAA +
Preference number: 2 (lower is better)
Translates to: DLEALAEGADTVFTM*ISSSSNWQSVLHAK
Trigger: TTTAGCATGTAAAACCGATTGCCAGTTGCTTGATGATGAAATCAACATAGTGAATACTGTGTCTGCTCCCTCTGCCAAAGCTTCTAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTCTGAGCAGTAGAAGATaGGTAGCCCTCTCTAACCAA +
Preference number: 2 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSLSSRR*VALSNQ
Trigger: TTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAG...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTCATGTGCCCACACACTaGCATCATTTCTCATCAGGT +
Preference number: 2 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSHVPTH*HHFSSG
Trigger: ACCTGATGAGAAATGATGGCAGTGTGTGGGCACATG...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp CACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGTGAGGCAGAAATGGTACTaGCTTATATCGATGACTACC +
Preference number: 2 (lower is better)
Translates to: HKAIFANRSIPTSMAMLVRQKWY*LISMTT
Trigger: GGTAGTCATCGATATAAGGCAGTACCATTTCTGCCT...CACCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR-3UTR GCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAGAACAGCTGCCTCTCTaGTGCATTATCCCCAAAGAA +
Preference number: 2 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSEQLPL*CIIPKE
Trigger: TTCTTTGGGGATAATGCAGCAGAGAGGCAGCTGTTC...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR CCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTTTCTCTACTAGCTTCTaGAAGCCCAGGCCCCAAATA +
Preference number: 2 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSFSTSF*KPRPQI
Trigger: TATTTGGGGCCTGGGCTTCCAGAAGCTAGTAGAGAA...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTCACCGCAGCATATTGTaGTTCTTCAACACTGAACCT +
Preference number: 2 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSHRSIL*FFNTEP
Trigger: AGGTTCAGTGTTGAAGAAGCACAATATGCTGCGGTG...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGGATTCTTGTACTCTCTaGTACACGACAGGAAAAATG +
Preference number: 2 (lower is better)
Translates to: WEKEKERKRERERSVDVMDSCTL*YTTGKM
Trigger: CATTTTTCCTGTCGTGTAGCAGAGAGTACAAGAATC...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTGTCCTCATGTGTAGCTaGCTGATGAACTACACACAC +
Preference number: 2 (lower is better)
Translates to: QPTQHISTPSCSTVQRITVLMCS*LMNYTH
Trigger: GTGTGTGTAGTTCATCAGCCAGCTACACATGAGGAC...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR CAA 90 bp TTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTaGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTATTTTTGC +
Preference number: 2 (lower is better)
Translates to: LTWINGNYLLHGRIF*AVFPLEAIIPPYFC
Trigger: GCAAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
3UTR-3UTR TCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGGTGCTTCTTCAACACTaGACCTCTCTTAATTTTCAG +
Preference number: 2 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTVLLQH*TSLNFQ
Trigger: CTGAAAATTAAGAGAGGTTCAGTGTTGAAGAAGCAC...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR TCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTGAGTCACTGCTTTGCTaGAATGATTCTTGTACTCTC +
Preference number: 2 (lower is better)
Translates to: FQGGNGTHYKTSESTALIESLLC*NDSCTL
Trigger: GAGAGTACAAGAATCATTTCAGCAAAGCAGTGACTC...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGCTCATGGTGAGTCACTaGTTTGCTGAAATGATTCTT +
Preference number: 2 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTLMVSH*FAEMIL
Trigger: AAGAATCATTTCAGCAAAGCAGTGACTCACCATGAG...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCATCTTCCATTTTAGACTaGAGCATTTTGGTCCTCATG +
Preference number: 2 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSSSILD*SILVLM
Trigger: CATGAGGACCAAAATGCTTCAGTCTAAAATGGAAGA...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR TCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTTCTTCCATTTTAGACTaGAGCATTTTGGTCCTCATG +
Preference number: 2 (lower is better)
Translates to: FQGGNGTHYKTSESTALISSILD*SILVLM
Trigger: CATGAGGACCAAAATGCTTCAGTCTAAAATGGAAGA...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR TCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACGATCCACTACACATCTaGGTTTTCATCTCGCAGAAG +
Preference number: 2 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNDPLHI*VFISQK
Trigger: CTTCTGCGAGATGAAAACTCAGATGTGTAGTGGATC...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR TCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAGAGTCACTGCTTTGCTaGAATGATTCTTGTACTCTC +
Preference number: 2 (lower is better)
Translates to: TQHISTPSCSTVQRITSAESLLC*NDSCTL
Trigger: GAGAGTACAAGAATCATTTCAGCAAAGCAGTGACTC...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR TCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCATTTGTCCTCCTTCTATaGGTAAGAGAGTGGGAAAAG +
Preference number: 2 (lower is better)
Translates to: TQHISTPSCSTVQRITSAFVLLL*VREWEK
Trigger: CTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAA...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR TCA 90 bp ATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGACTGCCTTATATCGATaGCTACCATGCTTTTGTGCT +
Preference number: 2 (lower is better)
Translates to: MGSKHKAIFANRSIPTSMTALYR*LPCFCA
Trigger: AGCACAAAAGCATGGTAGTCATCGATATAAGGCAGT...CATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCATACAGGCATTATTTCTaGAGATGGACACCTTTACCT +
Preference number: 2 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSYRHYF*RWTPLP
Trigger: AGGTAAAGGTGTCCATCTTCAGAAATAATGCCTGTA...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR TCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTCACACTTTTCACTaGCTTGGTATGACCTTGACT +
Preference number: 2 (lower is better)
Translates to: QPTQHISTPSCSTVQRITSHTFH*LGMTLT
Trigger: AGTCAAGGTCATACCAAGTCAGTGAAAAGTGTGACT...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAACGTCAGAGAGTACTaGTCTAATTCGACACATTTC +
Preference number: 2 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSNVREY*SNSTHF
Trigger: GAAATGTGTCGAATTAGAGCAGTACTCTCTGACGTT...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAAACGTCAGAGAGTACTaGTCTAATTCGACACATTTC +
Preference number: 2 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSNVREY*SNSTHF
Trigger: GAAATGTGTCGAATTAGAGCAGTACTCTCTGACGTT...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTAAGACAGGCAGACACTaGCAAATAAGTAAGTGCAAT +
Preference number: 2 (lower is better)
Translates to: FQGGNGTHYKTSESTALIKTGRH*QISKCN
Trigger: ATTGCACTTACTTATTTGCCAGTGTCTGCCTGTCTT...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTTCATCATCAAGCAACTaGCAATCGGTTTTACATGCT +
Preference number: 2 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTSSSSN*QSVLHA
Trigger: AGCATGTAAAACCGATTGCCAGTTGCTTGATGATGA...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGATATACTTCTaGGAACTCACTGCTAAATAC +
Preference number: 2 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSTLIYF*ELTAKY
Trigger: GTATTTAGCAGTGAGTTCTCAGAAGTATATCAGTGT...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR GCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAATTTCCTGCTTGAAATaGCAACTGAGCAAGATTTCC +
Preference number: 2 (lower is better)
Translates to: TQHISTPSCSTVQRITSAISCLK*QLSKIS
Trigger: GGAAATCTTGCTCAGTTGGCATTTCAAGCAGGAAAT...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTCCAAGCAGTGTTTACTaGCTAAAGTACCAAAACATA +
Preference number: 2 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSPSSVY*LKYQNI
Trigger: TATGTTTTGGTACTTTAGGCAGTAAACACTGCTTGG...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CCA 90 bp AAAAAGGCTTTACTTGGGGCGTTACCAATGATAGGAACACAATTTAACAATGAATATCTTGTTCCCAGTTaGAAAATAAAGGGTGCGTGC +
Preference number: 2 (lower is better)
Translates to: KKALLGALPMIGTQFNNEYLVPS*KIKGAC
Trigger: GCACGCACCCTTTATTTTCCAACTGGGAACAAGATA...TTCATTGTTAAATTGTGTTCCTATCATTGGTAACGCCCCAAGTAAAGCCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR-3UTR GCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGATATTTCTTTGTGCTaGCTTTGTGTATATGATCCA +
Preference number: 2 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTDISLC*LCVYDP
Trigger: TGGATCATATACACAAAGGCAGCACAAAGAAATATC...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR GCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCATCACTGGTATCATATTaGTCTGATAACACTCAAATG +
Preference number: 2 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSSLVSY*SDNTQM
Trigger: CATTTGAGTGTTATCAGAGCAATATGATACCAGTGA...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCATACCAAAACATACTATaGTGCCCTTTTAGTAGTGAT +
Preference number: 2 (lower is better)
Translates to: TQHISTPSCSTVQRITSAYQNIL*CPFSSD
Trigger: ATCACTACTAAAAGGGCACCATAGTATGTTTTGGTA...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR GCA 72 bp ATGCAGGGGAAGCCAGGACTGCATCTTTCACCACTGTaGTCCCCAGAGCTAGTCTGGCACACAGCAGGCTCT +
Preference number: 3 (lower is better)
Translates to: MQGKPGLHLSPL*SPELVWHTAGS
Trigger: AGAGCCTGCTGTGTGCCAGACTAGCTCTGGGGAGCACAGTGGTGAAAGATGCAGTCCTGGCTTCCCCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
3UTR-3UTR CAA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGATTGGCCCTTGGGCTTTaGGCTAGCCCAGGGTCAAGT +
Preference number: 3 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGLALGL*ASPGSS
Trigger: ACTTGACCCTGGGCTAGCCAAAAGCCCAAGGGCCAA...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR TCA 72 bp TTGTACAGCGGTTCCAGGTGTGGAACGGGGTCCATTTaGCCTAGAAGCTTTGGCAGAGGGAGCAGACACAGT +
Preference number: 3 (lower is better)
Translates to: LYSGSRCGTGSI*PRSFGRGSRHS
Trigger: ACTGTGTCTGCTCCCTCTGCCAAAGCTTCTAGGTCAAATGGACCCCGTTCCACACCTGGAACCGCTGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR CCA 72 bp TGCTTTTGTGCTGTGCTTAAAAGCCTTGGGTGGTGGTaGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGC +
Preference number: 3 (lower is better)
Translates to: CFCAVLKSLGWW*GSNLQWKAAWC
Trigger: GCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGCTTTTAAGCACAGCACAAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR TCA 72 bp TCTGCACATTTGACAGCCTTGTTGGCTGCTGCCACATaGAGAGGGGTCTGCCAGTTCTTGTCCCTTGCATTG +
Preference number: 3 (lower is better)
Translates to: SAHLTALLAAAT*RGVCQFLSLAL
Trigger: CAATGCAAGGGACAAGAACTGGCAGACCCCTCTTCATGTGGCAGCAGCCAACAAGGCTGTCAAATGTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
3UTR GCA 72 bp GATCACTTCTGCACATTTGACAGCCTTGTTGGCTGCTaGCACATGAAGAGGGGTCTGCCAGTTCTTGTCCCT +
Preference number: 3 (lower is better)
Translates to: DHFCTFDSLVGC*HMKRGLPVLVP
Trigger: AGGGACAAGAACTGGCAGACCCCTCTTCATGTGGCAGCAGCCAACAAGGCTGTCAAATGTGCAGAAGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
3UTR GCA 72 bp GGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTaGCCTCCCTCGATTAATTCCTTCTCTACTAGCTTC +
Preference number: 3 (lower is better)
Translates to: GHLCDCSTQQPH*PPSINSFSTSF
Trigger: GAAGCTAGTAGAGAAGGAATTAATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR CAA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACGTGGAAATGCTAGGTTaGGCCCTTGGGCTTTTGGCT +
Preference number: 3 (lower is better)
Translates to: RRRASRLQCLLSSKLATDVEMLG*ALGLLA
Trigger: AGCCAAAAGCCCAAGGGCCAAACCTAGCATTTCCAC...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CAA 90 bp AAAGCCTTCACTCTGCCACTGATTACCACACACACACACACACACACACACACACTGTGCTTAAAAGCCTaGGGTGGTGGTGGGGCTCTA +
Preference number: 3 (lower is better)
Translates to: KAFTLPLITTHTHTHTHTLCLKA*GGGGAL
Trigger: TAGAGCCCCACCACCACCCAAGGCTTTTAAGCACAG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGGTAATCAGTGGCAGAGTGAAGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR TCA 72 bp AGATGCGTAGCCCTCTCTAACCAACGCGGAAGAACCTaGGGGTCATCTGGAAACCTTAGCAGTGGAAATGCT +
Preference number: 3 (lower is better)
Translates to: RCVALSNQRGRT*GSSGNLSSGNA
Trigger: AGCATTTCCACTGCTAAGGTTTCCAGATGACCCTCAGGTTCTTCCGCGTTGGTTAGAGAGGGCTACGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR GCA 72 bp GACATTGACACTGCTCAGCAGGGGAATGATCACTTCTaGACATTTGACAGCCTTGTTGGCTGCTGCCACATG +
Preference number: 3 (lower is better)
Translates to: DIDTAQQGNDHF*TFDSLVGCCHM
Trigger: CATGTGGCAGCAGCCAACAAGGCTGTCAAATGTGCAGAAGTGATCATTCCCCTGCTGAGCAGTGTCAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
3UTR GCA 72 bp CAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTaGTTCCCAATCACAGACAGGCAAGGCGAATCCGGT +
Preference number: 3 (lower is better)
Translates to: QYLVPSWKIKGA*FPITDRQGESG
Trigger: ACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR-3UTR CAA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGTTGGCCCTTGGGCTTTaGGCTAGCCCAGGGTCAAGT +
Preference number: 3 (lower is better)
Translates to: WEKEKERKRERERSVDVMLALGL*ASPGSS
Trigger: ACTTGACCCTGGGCTAGCCAAAAGCCCAAGGGCCAA...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR GCA 72 bp GAGTGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTaGATTCTGATTCATAATTGGTCCCTCAGGGTGCCT +
Preference number: 3 (lower is better)
Translates to: ECNPLRSVAGIK*ILIHNWSLRVP
Trigger: AGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR CCA 72 bp TCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTaGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGAT +
Preference number: 3 (lower is better)
Translates to: SVAGIKCILIHN*SLRVPVLQPTD
Trigger: ATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR-3UTR CAA 90 bp TTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACCTCAGGGTGCCTGTTTaGCAGCCAACCGATGTTCTT +
Preference number: 3 (lower is better)
Translates to: FPVSCSQLENKGCVLPNHLRVPV*QPTDVL
Trigger: AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAG...GTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR-3UTR CAA 90 bp AAGAGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCGCAGAGTGTAACCCTTaGCGTTCTGTGGCTGGGATA +
Preference number: 3 (lower is better)
Translates to: KRNFQYLVPSWKIKGACFAECNP*RSVAGI
Trigger: TATCCCAGCCACAGAACGCAAAGGGTTACACTCTGC...GAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR GCA 72 bp TTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTaGGTGCTTCCCAATCACAGACAGGCAAGGCGAATC +
Preference number: 3 (lower is better)
Translates to: FPVSCSQLENKG*VLPNHRQARRI
Trigger: GATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
3UTR TCA 72 bp TTGTGCTGCCTTTGTGTATATGATCCACTACACATCTaGGTTTTCATCTCGCAGAAGGGCATCCAGACTGCA +
Preference number: 3 (lower is better)
Translates to: LCCLCVYDPLHI*VFISQKGIQTA
Trigger: TGCAGTCTGGATGCCCTTCTGCGAGATGAAAACTCAGATGTGTAGTGGATCATATACACAAAGGCAGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR GCA 72 bp CATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTaGCTTATATCGATGACTACCATGCTTTTGTGCTGT +
Preference number: 3 (lower is better)
Translates to: HGNAGVRRQKWY*LISMTTMLLCC
Trigger: ACAGCACAAAAGCATGGTAGTCATCGATATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR CCA 72 bp TGCCCTCCCTCGATTAATTCCTTCTCTACTAGCTTCTaGAAGCCCAGGCCCCAAATAATACTTGAATACAAC +
Preference number: 3 (lower is better)
Translates to: CPPSINSFSTSF*KPRPQIILEYN
Trigger: GTTGTATTCAAGTATTATTTGGGGCCTGGGCTTCCAGAAGCTAGTAGAGAAGGAATTAATCGAGGGAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR CAA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGTTTGACCTAGAAGCTTaGGCAGAGGGAGCAGACACA +
Preference number: 3 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTFDLEA*AEGADT
Trigger: TGTGTCTGCTCCCTCTGCCAAAGCTTCTAGGTCAAA...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR TCA 72 bp ATGGAGATAACGTCTCATGGTGAGTCACTGCTTTGCTaGAATGATTCTTGTACTCTCTGCTACACGACAGGA +
Preference number: 3 (lower is better)
Translates to: MEITSHGESLLC*NDSCTLCYTTG
Trigger: TCCTGTCGTGTAGCAGAGAGTACAAGAATCATTTCAGCAAAGCAGTGACTCACCATGAGACGTTATCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR GCA 72 bp TGCCAGTTCTTGTCCCTTGCATTGACATCAGCTGAGTaGTTAATCAAAACCTGTACTGCTTCTTCACTTCTG +
Preference number: 3 (lower is better)
Translates to: CQFLSLALTSAE*LIKTCTASSLL
Trigger: CAGAAGTGAAGAAGCAGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAACTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
3UTR CCA 72 bp AACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATaGTACTGCCTTATATCGATGACTACCATGCTTTTG +
Preference number: 3 (lower is better)
Translates to: NFHGNAGVRRQK*YCLISMTTMLL
Trigger: CAAAAGCATGGTAGTCATCGATATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR TCA 72 bp AGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATaGGTAAGAGAGTGGGAAAAGTCAAAACGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: SMISFRSFVLLL*VREWEKSKRSS
Trigger: GGAGCTGCGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR TCA 72 bp GTGTTAGGAGGCAGAAATGGTACTGCCTTATATCGATaGCTACCATGCTTTTGTGCTGTGCTTAAAAGCCTT +
Preference number: 3 (lower is better)
Translates to: VLGGRNGTALYR*LPCFCAVLKSL
Trigger: AAGGCTTTTAAGCACAGCACAAAAGCATGGTAGTCATCGATATAAGGCAGTACCATTTCTGCCTCCTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR-3UTR CAA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGTGGACACCTTTACCTTaGGCTTCTAGTGAGGAAGTA +
Preference number: 3 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVWTPLP*ASSEEV
Trigger: TACTTCCTCACTAGAAGCCAAAGGTAAAGGTGTCCA...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR CAA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGTTTTTATTTCTCCTTTaGGCACATGTGCCCACACAC +
Preference number: 3 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVFLFLL*AHVPTH
Trigger: GTGTGTGGGCACATGTGCCAAAAGGAGAAATAAAAA...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CAA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGCATTTCATTTCCTGCTaGAAATGCCAACTGAGCAAG +
Preference number: 3 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVHFISC*KCQLSK
Trigger: CTTGCTCAGTTGGCATTTCAAGCAGGAAATGAAATG...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CAA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTGTCTCATTCTTCTTTTaGTACAGCGGTTCCAGGTGT +
Preference number: 3 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSVSFFF*YSGSRC
Trigger: ACACCTGGAACCGCTGTACAAAAAGAAGAATGAGAC...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR-3UTR CAA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCATTTTTATTTCTCCTTTaGGCACATGTGCCCACACAC +
Preference number: 3 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSFLFLL*AHVPTH
Trigger: GTGTGTGGGCACATGTGCCAAAAGGAGAAATAAAAA...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CAA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCATTTCATTTCCTGCTaGAAATGCCAACTGAGCAAG +
Preference number: 3 (lower is better)
Translates to: FQGGNGTHYKTSESTALIHFISC*KCQLSK
Trigger: CTTGCTCAGTTGGCATTTCAAGCAGGAAATGAAATG...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CAA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGAATGTTAACGCTGCTTaGCCATTAAAGCAAGCATTT +
Preference number: 3 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVNVNAA*PLKQAF
Trigger: AAATGCTTGCTTTAATGGCAAAGCAGCGTTAACATT...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR-3UTR CAA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTTATAAGCACACCAAGTaGCTCAACAGTACAAAGAAT +
Preference number: 3 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSYKHTK*LNSTKN
Trigger: ATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATA...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR GCA 72 bp GTTCTTCAACCAACACAACATATAAGCACACCAAGTTaGTCAACAGTACAAAGAATAACTAGTGCAGCAAAT +
Preference number: 3 (lower is better)
Translates to: VLQPTQHISTPS*STVQRITSAAN
Trigger: ATTTGCTGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTGAAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR TCA 72 bp ATTTCTAGATATTTCTTTGTGCTGCCTTTGTGTATATaGTCCACTACACATCTGAGTTTTCATCTCGCAGAA +
Preference number: 3 (lower is better)
Translates to: ISRYFFVLPLCI*STTHLSFHLAE
Trigger: TTCTGCGAGATGAAAACTCAGATGTGTAGTGGATCATATACACAAAGGCAGCACAAAGAAATATCTAGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR CCA 72 bp ACAGTATTCACTATGTTGATTTCATCATCAAGCAACTaGCAATCGGTTTTACATGCTAAATCACCCATTTCT +
Preference number: 3 (lower is better)
Translates to: TVFTMLISSSSN*QSVLHAKSPIS
Trigger: AGAAATGGGTGATTTAGCATGTAAAACCGATTGCCAGTTGCTTGATGATGAAATCAACATAGTGAATACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR CCA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCGCTCGCTCAGCCACGTaGCGTGGCCACGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTARSAT*RGHEQL
Trigger: CAGCTGCTCGTGGCCACGCCACGTGGCTGAGCGAGC...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTAGTGGCCCATGTATGCTaGCCAGTGCAGAGCACGCCG +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVVAHVC*PVQSTP
Trigger: CGGCGTGCTCTGCACTGGGCAGCATACATGGGCCAC...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp CCTCGGTCGGAGACATTGACACTGCTCAGCAGGGGAATGATCACTTCTGCACATTCGCGCGCACACACATaGAGGTCCCCGGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: PRSETLTLLSRGMITSAHSRAHT*RSPARR
Trigger: TCTGCGGGCCGGGGACCTGCATGTGTGTGCGCGCGA...ATGTGCAGAAGTGATCATTCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CCA 90 bp TCACTTCTGGAAGCAACAGCCCGGTGCAGTGGAGTCAGCCACATGTTGTCCTTGCCGTTCAGAGCCGCATaGTGCAAGGCTGTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: SLLEATARCSGVSHMLSLPFRAA*CKAVRP
Trigger: GGGGCGCACAGCCTTGCACCATGCGGCTCTGAACGG...CAAGGACAACATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR GCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTAATGTATGCTGCCCAGTaGAGAGCACGCCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVMYAAQ*RARRSF
Trigger: GAAGGACCGGCGTGCTCTGCACTGGGCAGCATACAT...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCCCACCTTTAAGCCATTaGGCGCAGCGACGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTPPLSH*AQRRGG
Trigger: CCCTCCACGTCGCTGCGCGCAATGGCTTAAAGGTGG...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAGCTCGCTCAGCCACGTaGCGTGGCCACGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPARSAT*RGHEQL
Trigger: CAGCTGCTCGTGGCCACGCCACGTGGCTGAGCGAGC...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCGCAAATGCTGCCGCATaGAGGGGTGTCCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTANAAA*RGVLPL
Trigger: CAAAGGCAGGACACCCCTTCATGCGGCAGCATTTGC...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTAGCCTTGTTGGCTGCTaGCACATGAAGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSISLVGC*HMKRGL
Trigger: CAGACCCCTCTTCATGTGGCAGCAGCCAACAAGGCT...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR TCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTCCTCTGGATCACCGCTaGAGATTGCCTGAACCAATG +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSIPLDHR*RLPEPM
Trigger: CATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGG...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR TCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTCCTGCAGCAGCAGCATaGAGGCACGTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSIPAAAA*RHVLPN
Trigger: ATTTGGAAGAACGTGCCTTCATGCTGCTGCTGCAGG...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp TCACTTCTGGAAGCAACAGCCCGGTGCAGTGGAGTCAGCCACATGTTGTCCTTGGAAGCAACAGCCCGGTaGAGTGGAGTCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: SLLEATARCSGVSHMLSLEATAR*SGVSHM
Trigger: CATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTC...CAAGGACAACATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACGTGGCCCATGTATGCTaGCCAGTGCAGAGCACGCCG +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDVAHVC*PVQSTP
Trigger: CGGCGTGCTCTGCACTGGGCAGCATACATGGGCCAC...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTACCCAACAGCCTCACTaGCCTCCCTCGATTAATTCC +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSITQQPH*PPSINS
Trigger: GGAATTAATCGAGGGAGGGCAGTGAGGCTGTTGGGT...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR CCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCCGTTCAGAGCCGCATaGTGCAAGGCTGTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLPFRAA*CKAVRP
Trigger: GGGGCGCACAGCCTTGCACCATGCGGCTCTGAACGG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTATCACTTCTGCACATTTaGCAGCCTTGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVSLLHI*QPCWLL
Trigger: CAGCAGCCAACAAGGCTGTCAAATGTGCAGAAGTGA...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTAAGATGGATGCGCCCTaGTTGATAAGCGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSIKMDAP*LISAST
Trigger: TGTGGAAGCGCTTATCAATCAGGGCGCATCCATCTT...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTGTGGCCCATGTATGCTaGCCAGTGCAGAGCACGCCG +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLVAHVC*PVQSTP
Trigger: CGGCGTGCTCTGCACTGGGCAGCATACATGGGCCAC...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGACAAGTGGCCCATGTATaGTGCCCAGTGCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGQVAHV*CPVQST
Trigger: CGTGCTCTGCACTGGGCAGCATACATGGGCCACTTG...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTCATGGAGAGGAGTGTTaGCGTCCTTATCCACACAGT +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSIHGEEC*RPYPHS
Trigger: ACTGTGTGGATAAGGACGGCAACACTCCTCTCCATG...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACCCAGGCTGGAGTGGTaGAGTGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPPRLEW*SGTISA
Trigger: AGCTGAGATCGTGCCACTGCACCACTCCAGCCTGGG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCTATGGATTCCACACTTaGCTGTGTCAGCTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTYGFHT*LCQLRW
Trigger: CCAGCGGAGCTGACACAGCCAAGTGTGGAATCCATA...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACGGGTCTGTGACCGTGTaGACCTTCCATGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDGSVTV*TFHGQL
Trigger: CAGCTGTCCATGGAAGGTTCACACGGTCACAGACCC...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAGGCCTTTCTCATCCCTaGTGTCCAGGTCCACCAACG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPGLSHP*CPGPPT
Trigger: CGTTGGTGGACCTGGACATCAGGGATGAGAAAGGCC...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAGCAAATGCTGCCGCATaGAGGGGTGTCCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPANAAA*RGVLPL
Trigger: CAAAGGCAGGACACCCCTTCATGCGGCAGCATTTGC...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACGCAAATGCTGCCGCATaGAGGGGTGTCCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDANAAA*RGVLPL
Trigger: CAAAGGCAGGACACCCCTTCATGCGGCAGCATTTGC...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACCGCTGAAGATTGCCTaGACCAATGGTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPPLKIA*TNGGWP
Trigger: AGGCCAGCCACCATTGGTTCAGGCAATCTTCAGCGG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTAGAGTTCAATGATCTCTaGATCTCCCAGAAATGCGGC +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVEFNDL*ISQKCG
Trigger: GCCGCATTTCTGGGAGATGCAGAGATCATTGAACTC...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACATGTATGCTGCCCAGTaGAGAGCACGCCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDMYAAQ*RARRSF
Trigger: GAAGGACCGGCGTGCTCTGCACTGGGCAGCATACAT...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACAAGTGGCCCATGTATaGTGCCCAGTGCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPQVAHV*CPVQST
Trigger: CGTGCTCTGCACTGGGCAGCATACATGGGCCACTTG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTACGTAATGCAAAGCTGTaGGTCCCCAGTCATCTGTTT +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVRNAKL*VPSHLF
Trigger: AAACAGATGACTGGGGACGCACAGCTTTGCATTACG...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTCGTAATGCAAAGCTGTaGGTCCCCAGTCATCTGTTT +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSIRNAKL*VPSHLF
Trigger: AAACAGATGACTGGGGACGCACAGCTTTGCATTACG...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTGTGGCCACGAGCAGCTaGATAGTGCAAGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLVATSS*IVQGRP
Trigger: AGGACGCCCTTGCACTATGCAGCTGCTCGTGGCCAC...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATTGACCATCTCCACGTaGCCGTTCAGAGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPLTIST*PFRAAW
Trigger: CCATGCGGCTCTGAACGGCCACGTGGAGATGGTCAA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCAGAAAGAGCCATTTaGAGCAGCTCGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CVLPNHRQARRIRLLPFPSERAI*SSSLSH
Trigger: GTGGCTGAGCGAGCTGCTCCAAATGGCTCTTTCTGA...AGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTTGGCTGCTGCCACATaGAGAGGGGTCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLLAAAT*RGVCQF
Trigger: GAACTGGCAGACCCCTCTTCATGTGGCAGCAGCCAA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCTCGGTCGGAGACATTaGCACTGCTCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLLGRRH*HCSAGE
Trigger: TTCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTATTGCCATCTTTACTCTaGATGTTAACATCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVLPSLL*MLTSAP
Trigger: CGGGGCAGATGTTAACATTCAGAGTAAAGATGGCAA...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAGGGTCTGTGACCGTGTaGACCTTCCATGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSGSVTV*TFHGQL
Trigger: CAGCTGTCCATGGAAGGTTCACACGGTCACAGACCC...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGACTGAATGAGGGTCTGTaGCCGTGTGAACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGLNEGL*PCEPSM
Trigger: CATGGAAGGTTCACACGGTCACAGACCCTCATTCAG...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTAATTTCTATCCATGTCTaGTGCAGCGGCGTAATGCAA +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVISIHV*CSGVMQ
Trigger: TTGCATTACGCCGCTGCATCAGACATGGATAGAAAT...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp AGGGTGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTAAGATGGATGCGCCCTaGTTGATAAGCGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: RVRASQSQTGKANPVTPFKMDAP*LISAST
Trigger: TGTGGAAGCGCTTATCAATCAGGGCGCATCCATCTT...AAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGACAACGCGGAAGAACCTaGGGGTCATCTGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGQRGRT*GSSGNL
Trigger: AAGGTTTCCAGATGACCCTCAGGTTCTTCCGCGTTG...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTGAAGCAACAGCCCGGTaGAGTGGAGTCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLEATAR*SGVSHM
Trigger: CATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTC...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACAGCCTTGTTGGCTGCTaGCACATGAAGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDSLVGC*HMKRGL
Trigger: CAGACCCCTCTTCATGTGGCAGCAGCCAACAAGGCT...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTATGTATGCTGCCCAGTaGAGAGCACGCCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLMYAAQ*RARRSF
Trigger: GAAGGACCGGCGTGCTCTGCACTGGGCAGCATACAT...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTTCTGCTCCGCTGCTCTaGAAGAGTTTTATACATTCC +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSISAPLL*KSFIHS
Trigger: GGAATGTATAAAACTCTTGCAGAGCAGCGGAGCAGA...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACAATATCCACAGCGCCTaGCTGCCCATTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDNIHSA*LPILSS
Trigger: GCTGCTGAGAATGGGCAGGCAGGCGCTGTGGATATT...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AAACCTGTACTGCTTCTTCACTTCTGGAAGCAACAGCCCGGTGCAGTGGAGTCAAACAGCCCGGTGCAGTaGAGTCAGCCACATGTTGTC +
Preference number: 4 (lower is better)
Translates to: KPVLLLHFWKQQPGAVESNSPVQ*SQPHVV
Trigger: GACAACATGTGGCTGACTCCACTGCACCGGGCTGTT...TGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAGTACAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGATATCTTGCAGCCACATaGAGAGGAGTGTTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGYLAAT*RGVLPS
Trigger: GGACGGCAACACTCCTCTCCATGTGGCTGCAAGATA...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTTTTCCTTCAGCTCCCTaGCTCTTTCAAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSIFPSAP*LFQVLL
Trigger: CAGAAGAACTTGAAAGAGCCAGGGAGCTGAAGGAAA...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR CCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAGCTGGAGTGGTGCAGTaGCACGATCTCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSAGVVQ*HDLSSQ
Trigger: CTGTGAGCTGAGATCGTGCCACTGCACCACTCCAGC...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTAAATGCCTCTGTGATTTaGGGTATGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVNASVI*GMCVCV
Trigger: CACACACACACACATACCCCAAATCACAGAGGCATT...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR CAA 72 bp CCTTCCCCAACCGCAGCTCCTGCAGAGTGTAACCCTTaGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATT +
Preference number: 4 (lower is better)
Translates to: PSPTAAPAECNP*RSVAGIKCILI
Trigger: AATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTCTGCAGGAGCTGCGGTTGGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp AAACCTGTACTGCTTCTTCACTTCTGGAAGCAACAGCCCGGTGCAGTGGAGTCACCTCTGGATCACCGCTaGAGATTGCCTGAACCAATG +
Preference number: 4 (lower is better)
Translates to: KPVLLLHFWKQQPGAVESPLDHR*RLPEPM
Trigger: CATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGG...TGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAGTACAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR TCA 90 bp GACATTGACACTGCTCAGCAGGGGAATGATCACTTCTGCACATTTGACAGCCTTCTCGGTCGGAGACATTaGCACTGCTCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: DIDTAQQGNDHFCTFDSLLGRRH*HCSAGE
Trigger: TTCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAG...AAGGCTGTCAAATGTGCAGAAGTGATCATTCCCCTGCTGAGCAGTGTCAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR TCA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCTTGCCATCTTTACTCTaGATGTTAACATCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTLPSLL*MLTSAP
Trigger: CGGGGCAGATGTTAACATTCAGAGTAAAGATGGCAA...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTTTTGTCCTCCTTCTATaGGTAAGAGAGTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSIFVLLL*VREWEK
Trigger: CTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAA...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp AACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGTCGCGCGCACACACATaGAGGTCCCCGGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: NTKPYLLIGLYQLPWQCWSRAHT*RSPARR
Trigger: TCTGCGGGCCGGGGACCTGCATGTGTGTGCGCGCGA...CCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAAGCCTTGTTGGCTGCTaGCACATGAAGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSSLVGC*HMKRGL
Trigger: CAGACCCCTCTTCATGTGGCAGCAGCCAACAAGGCT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACTGTCCATTGGAGGCTaGAGCATGCAGAGGGGTATA +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPLSIGG*SMQRGI
Trigger: TATACCCCTCTGCATGCTGCAGCCTCCAATGGACAG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACAGACAGGCAAGGCGACTGTCCATTGGAGGCTaGAGCATGCAGAGGGGTATA +
Preference number: 4 (lower is better)
Translates to: SQLENKGCVLPNHRQARRLSIGG*SMQRGI
Trigger: TATACCCCTCTGCATGCTGCAGCCTCCAATGGACAG...TCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTGAGGCAGCAGCAAAATaGAAAGGGGTGAACCCATTA +
Preference number: 4 (lower is better)
Translates to: CVLPNHRQARRIRLLPFPEAAAK*KGVNPL
Trigger: TAATGGGTTCACCCCTTTGCATTTTGCTGCTGCCTC...AGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCCTCTGTGTAAAGCTGTaGATCCTAGGATGTCAACAG +
Preference number: 4 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTLCVKL*ILGCQQ
Trigger: CTGTTGACATCCTAGGATGCACAGCTTTACACAGAG...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGAATGATCAGCAAATGCTaGCGCATGAAGGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGMISKC*RMKGCP
Trigger: AGGACACCCCTTCATGCGGCAGCATTTGCTGATCAT...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTAATATCCACAGCGCCTaGCTGCCCATTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLNIHSA*LPILSS
Trigger: GCTGCTGAGAATGGGCAGGCAGGCGCTGTGGATATT...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGACAGCTGCCTCTCTGCTaGATTATCCCCAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGQLPLC*IIPKEQ
Trigger: CTGTTCTTTGGGGATAATGCAGCAGAGAGGCAGCTG...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR CCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACATCCGGATCTCCTCTaGATCACCGCTGAAGATTGC +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPHPDLL*ITAEDC
Trigger: GCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGAGCCACATGTTGTCCTTaGCATTTACACGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGATCCP*HLHELL
Trigger: CAGGAGCTCGTGTAAATGCCAAGGACAACATGTGGC...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTAACAGCCCGGTGCAGTaGAGTCAGCCACATGTTGTC +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLNSPVQ*SQPHVV
Trigger: GACAACATGTGGCTGACTCCACTGCACCGGGCTGTT...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATATCTTGCAGCCACATaGAGAGGAGTGTTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPYLAAT*RGVLPS
Trigger: GGACGGCAACACTCCTCTCCATGTGGCTGCAAGATA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATATGGATTCCACACTTaGCTGTGTCAGCTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPYGFHT*LCQLRW
Trigger: CCAGCGGAGCTGACACAGCCAAGTGTGGAATCCATA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCTTTCCTTCAGCTCCCTaGCTCTTTCAAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTFPSAP*LFQVLL
Trigger: CAGAAGAACTTGAAAGAGCCAGGGAGCTGAAGGAAA...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTAACTCTAGACATAGTGTaGCTTCCTTTTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVTLDIV*LPFPSA
Trigger: AGCTGAAGGAAAAGGAAGCCACACTATGTCTAGAGT...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp AGGGTGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTAGGGCGTCCTCCCTCTaGAATCTTTACAGAGAATTG +
Preference number: 4 (lower is better)
Translates to: RVRASQSQTGKANPVTPFRASSL*NLYREL
Trigger: CAATTCTCTGTAAAGATTCCAGAGGGAGGACGCCCT...AAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGCTCGCTCAGCCACGTaGCGTGGCCACGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVARSAT*RGHEQL
Trigger: CAGCTGCTCGTGGCCACGCCACGTGGCTGAGCGAGC...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATCAGAAAGAGCCATTTaGAGCAGCTCGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPSERAI*SSSLSH
Trigger: GTGGCTGAGCGAGCTGCTCCAAATGGCTCTTTCTGA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACTTGCGCGCAGCGACGTaGAGGGGTGTCTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: FPVSCSQLENKGCVLPNHLRAAT*RGVCSA
Trigger: TGCACTGCAGACACCCCTCCACGTCGCTGCGCGCAA...GTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCAGCCTTGGGTGGTGGTaGGGCTCTAACCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: VYTNFHGNAGVRRQKWYCSLGWW*GSNLQW
Trigger: CCATTGCAGGTTAGAGCCCCACCACCACCCAAGGCT...GCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCTCTGGATCACCGCTaGAGATTGCCTGAACCAATG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSPLDHR*RLPEPM
Trigger: CATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp ACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTATATTGGCTGCTGCCACATaGAGAGGGGTCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TNFHGNAGVRRQKWYCLILAAAT*RGVCQF
Trigger: GAACTGGCAGACCCCTCTTCATGTGGCAGCAGCCAA...TATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATCACTTCTGCACATTTaGCAGCCTTGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPSLLHI*QPCWLL
Trigger: CAGCAGCCAACAAGGCTGTCAAATGTGCAGAAGTGA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTGGCCAAGAGTAAATTaGCCATCTCCACGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLWPRVN*PSPRGR
Trigger: ACGGCCACGTGGAGATGGTCAATTTACTCTTGGCCA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCTGAATGAGGGTCTGTaGCCGTGTGAACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLLNEGL*PCEPSM
Trigger: CATGGAAGGTTCACACGGTCACAGACCCTCATTCAG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCTTAATCAAAAGCTCATaGCCGTATCTTGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTLIKSS*PYLAAT
Trigger: TGTGGCTGCAAGATACGGTCATGAGCTTTTGATTAA...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACCTGCAGCAGTCAGAGTaGGCATTTAGGGCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDLQQSE*AFRAAK
Trigger: TTTAGCTGCCCTAAATGCTCACTCTGACTGCTGCAG...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCCTGCAGCAGCAGCATaGAGGCACGTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLPAAAA*RHVLPN
Trigger: ATTTGGAAGAACGTGCCTTCATGCTGCTGCTGCAGG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTGGCCCCAAGCAGCAATaGTGCACAATTCCCATGATC +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLGPKQQ*CTIPMI
Trigger: GATCATGGGAATTGTGCATCATTGCTGCTTGGGGCC...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCATGCAAGCACTCCACATaGTCAGCAAATGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSCKHST*SANAAA
Trigger: TGCGGCAGCATTTGCTGATCATGTGGAGTGCTTGCA...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp CAGTTCTTGTCCCTTGCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTCTCCCGCCGAGAGGCTaGCACTGGCTAGTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: QFLSLALTSAECLIKTCTLPPRG*HWLVGF
Trigger: AAACCCCACTAGCCAGTGTCAGCCTCTCGGCGGGAG...AGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR GCA 90 bp TATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTTCGCGCGCACACACATaGAGGTCCCCGGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: YLLHGRIFLAVFPLEAIISRAHT*RSPARR
Trigger: TCTGCGGGCCGGGGACCTGCATGTGTGTGCGCGCGA...AATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp ACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTATAGAAGCAACAGCCCGGTaGAGTGGAGTCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: TNFHGNAGVRRQKWYCLIEATAR*SGVSHM
Trigger: CATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTC...TATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTAAATCAAAACCTGTACTaGTTCTTCACTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVNQNLY*FFTSGS
Trigger: GCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGATT...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp ACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTATACAAGTGGCCCATGTATaGTGCCCAGTGCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: TNFHGNAGVRRQKWYCLIQVAHV*CPVQST
Trigger: CGTGCTCTGCACTGGGCAGCATACATGGGCCACTTG...TATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACCATGGAGAGGAGTGTTaGCGTCCTTATCCACACAGT +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDHGEEC*RPYPHS
Trigger: ACTGTGTGGATAAGGACGGCAACACTCCTCTCCATG...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATTCCACATTACCTCCTaGAGCAGCAGCATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPFHITS*SSSMKA
Trigger: TGCCTTCATGCTGCTGCTGCAGGAGGTAATGTGGAA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGAATGACAATTCGCAGCTaGATAGTGCAAAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGMTIRS*IVQRGP
Trigger: AGGACCCCTTTGCACTATGCAGCTGCGAATTGTCAT...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTAGGTCCACCAACGACTaGAGAAGGACTTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLRSTND*RRTSKA
Trigger: AGCCTTGGAAGTCCTTCTGCAGTCGTTGGTGGACCT...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGATCCTTTTGGCACATGTaGCCACACACTGCCATCATT +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGSFWHM*PHTAII
Trigger: AATGATGGCAGTGTGTGGGCACATGTGCCAAAAGGA...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAAGGGGAAGCCAGGACTaGATCTTTCACCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSRGSQD*IFHHCA
Trigger: AGCACAGTGGTGAAAGATGCAGTCCTGGCTTCCCCT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACGATTGCCTGAACCAATaGTGGCTGGTCGGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDDCLNQ*WLVGEF
Trigger: AAACTCACCGACCAGCCACCATTGGTTCAGGCAATC...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCTGCTTCTTCACTTCTaGAAGCAACAGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLLLLHF*KQQPGA
Trigger: TGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGCCGTTCAGAGCCGCATaGTGCAAGGCTGTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTPFRAA*CKAVRP
Trigger: GGGGCGCACAGCCTTGCACCATGCGGCTCTGAACGG...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGCCGTTCAGAGCCGCATaGTGCAAGGCTGTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: NTKPYLLIGLYQLPWQCWPFRAA*CKAVRP
Trigger: GGGGCGCACAGCCTTGCACCATGCGGCTCTGAACGG...CCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp CTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTCCGTTCAGAGCCGCATaGTGCAAGGCTGTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: LNLDKWELSTARKNLFGSPFRAA*CKAVRP
Trigger: GGGGCGCACAGCCTTGCACCATGCGGCTCTGAACGG...ACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTCTTGTCCCGGATAGATaGATTTGCATCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSILVPDR*ICIILK
Trigger: CTTCAAAATGATGCAAATCCATCTATCCGGGACAAG...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTAGAAATGCGGCCACATaGAGAGGGGTTCGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLRNAAT*RGVRFS
Trigger: TGAGAAACGAACCCCTCTTCATGTGGCCGCATTTCT...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp AACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCGGGTCTGTGACCGTGTaGACCTTCCATGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: NPLRSVAGIKCILIHNWSGSVTV*TFHGQL
Trigger: CAGCTGTCCATGGAAGGTTCACACGGTCACAGACCC...GGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAATTTCACCTCCATTCTaGATGAGGGTCTGTGACCGT +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPISPPF*MRVCDR
Trigger: ACGGTCACAGACCCTCATTCAGAATGGAGGTGAAAT...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp TCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATTTCACCTCCATTCTaGATGAGGGTCTGTGACCGT +
Preference number: 4 (lower is better)
Translates to: SQLENKGCVLPNHRQARRISPPF*MRVCDR
Trigger: ACGGTCACAGACCCTCATTCAGAATGGAGGTGAAAT...TCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACTGCAGCAGTCAGAGTaGGCATTTAGGGCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSLQQSE*AFRAAK
Trigger: TTTAGCTGCCCTAAATGCTCACTCTGACTGCTGCAG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp GTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGGTGCCTGTTCCTGCAGCAGCAGCATaGAGGCACGTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: VAGIKCILIHNWSLRVPVPAAAA*RHVLPN
Trigger: ATTTGGAAGAACGTGCCTTCATGCTGCTGCTGCAGG...AACAGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTTCTTTCAAGTTCTTCTaGATTATCATGGGCATTTCC +
Preference number: 4 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSISFKFF*IIMGIS
Trigger: GGAAATGCCCATGATAATTCAGAAGAACTTGAAAGA...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAAAGATGGATGCGCCCTaGTTGATAAGCGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSKMDAP*LISAST
Trigger: TGTGGAAGCGCTTATCAATCAGGGCGCATCCATCTT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACGGAACGGGGTCCATTTaGCCTAGAAGCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDGTGSI*PRSIFI
Trigger: GATGAAAATGCTTCTAGGTCAAATGGACCCCGTTCC...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282272.15
CDS-3UTR TCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGAGATCCACTACACATCTaGGTTTTCATCTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGDPLHI*VFISQK
Trigger: CTTCTGCGAGATGAAAACTCAGATGTGTAGTGGATC...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAGCACTTGTAGGTATGTaGCTGTCACCTTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSALVGM*LSPSCR
Trigger: CCTGCATGAAGGTGACAGTCACATACCTACAAGTGC...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTATTCAGACAAAATTTGTaGAACCTTCTTATGGACAGG +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVFRQNL*NLLMDR
Trigger: CCTGTCCATAAGAAGGTTTCACAAATTTTGTCTGAA...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGCTGGGGCCATCTGTGTaGCTGTTCCACCCAACAGCC +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMLGPSV*LFHPTA
Trigger: GGCTGTTGGGTGGAACAGTCACACAGATGGCCCCAG...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAATCACCGCTGAAGATTaGCTGAACCAATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSITAED*LNQWWL
Trigger: CAGCCACCATTGGTTCAGGCAATCTTCAGCGGTGAT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACGAGTTCAATGATCTCTaGATCTCCCAGAAATGCGGC +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDEFNDL*ISQKCG
Trigger: GCCGCATTTCTGGGAGATGCAGAGATCATTGAACTC...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AGGGTGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCAGGTTCAGGAGATaGTTGACAACATTAATCTGT +
Preference number: 4 (lower is better)
Translates to: RVRASQSQTGKANPVTPFPRFRR*LTTLIC
Trigger: ACAGATTAATGTTGTCAAGCATCTCCTGAACCTGGG...AAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCATGGAGAGGAGTGTTaGCGTCCTTATCCACACAGT +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLHGEEC*RPYPHS
Trigger: ACTGTGTGGATAAGGACGGCAACACTCCTCTCCATG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACTCATGACCGTATCTTaGAGCCACATGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSLMTVS*SHMERS
Trigger: ACTCCTCTCCATGTGGCTGCAAGATACGGTCATGAG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTACCGGATAGATGGATTTaGATCATTTTGAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVPDRWI*IILKQK
Trigger: TTTCTGCTTCAAAATGATGCAAATCCATCTATCCGG...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp TGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTGTCAATATGTCCATATaGTACTGCAAGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: CVLPNHRQARRIRLLPFPVNMSI*YCKHQW
Trigger: CCACTGATGCTTGCAGTAGCATATGGACATATTGAC...AGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATGTTCCAGCAGCATTTaGACACATTCCTCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPCSSSI*THSSCP
Trigger: AGGACACGAGGAATGTGTGCAAATGCTGCTGGAACA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp AAGAGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCGTGGCCACGAGCAGCTaGATAGTGCAAGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: KRNFQYLVPSWKIKGACFVATSS*IVQGRP
Trigger: AGGACGCCCTTGCACTATGCAGCTGCTCGTGGCCAC...GAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAATGATCAGCAAATGCTaGCGCATGAAGGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSMISKC*RMKGCP
Trigger: AGGACACCCCTTCATGCGGCAGCATTTGCTGATCAT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACACATGATCAGCAAATaGTGCCGCATGAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSHMISK*CRMKGC
Trigger: ACACCCCTTCATGCGGCAGCATTTGCTGATCATGTG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp GCAGAGTGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATATTGGTCCCTCAGGGTaGCTGTTTTGCAGCCAACCG +
Preference number: 4 (lower is better)
Translates to: AECNPLRSVAGIKCILIHIGPSG*LFCSQP
Trigger: CGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAAT...ATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAGCCACATGTTGTCCTTaGCATTTACACGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSATCCP*HLHELL
Trigger: CAGGAGCTCGTGTAAATGCCAAGGACAACATGTGGC...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTCCGTTCAGAGCCGCATaGTGCAAGGCTGTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTPFRAA*CKAVRP
Trigger: GGGGCGCACAGCCTTGCACCATGCGGCTCTGAACGG...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATATTGACCATCTCCACGTaGCCGTTCAGAGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: SILVLMCSWLMNYTHTHILTIST*PFRAAW
Trigger: CCATGCGGCTCTGAACGGCCACGTGGAGATGGTCAA...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACGTGTGAACCTTCCATaGACAGCTGTCATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSRVNLP*TAVMCS
Trigger: ACTGCACATGACAGCTGTCCATGGAAGGTTCACACG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp CTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTTATCTTGCAGCCACATaGAGAGGAGTGTTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LIHNWSLRVPVLQPTDVLYLAAT*RGVLPS
Trigger: GGACGGCAACACTCCTCTCCATGTGGCTGCAAGATA...AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp AAAGCCTTCACTCTGCCACTGATTACCACACACACACACACACACACACACACATATGGATTCCACACTTaGCTGTGTCAGCTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KAFTLPLITTHTHTHTHTYGFHT*LCQLRW
Trigger: CCAGCGGAGCTGACACAGCCAAGTGTGGAATCCATA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGGTAATCAGTGGCAGAGTGAAGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTAGCTCGCTCAGCCACGTaGCGTGGCCACGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLARSAT*RGHEQL
Trigger: CAGCTGCTCGTGGCCACGCCACGTGGCTGAGCGAGC...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACGATACTGGAATCTATaGCCCCAAGCAGCAATGATG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPRYWNL*PQAAMM
Trigger: CATCATTGCTGCTTGGGGCCATAGATTCCAGTATCG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp CTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTGTACACAGGCCCCTTTaGCCAGCAACTCCTCAACTA +
Preference number: 4 (lower is better)
Translates to: LIHNWSLRVPVLQPTDVLVHRPL*PATPQL
Trigger: TAGTTGAGGAGTTGCTGGCCAAAGGGGCCTGTGTAC...AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACGTCCTCATGTGTAGCTaGCTGATGAACTACACACAC +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDVLMCS*LMNYTH
Trigger: GTGTGTGTAGTTCATCAGCCAGCTACACATGAGGAC...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCGGGTCATGAACTCCTaGCCTCAAGTAATCCAACTG +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLRVMNS*PQVIQL
Trigger: CAGTTGGATTACTTGAGGCCAGGAGTTCATGACCCG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp CAGTTCTTGTCCCTTGCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTCCGCTGAAGATTGCCTaGACCAATGGTGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: QFLSLALTSAECLIKTCTPLKIA*TNGGWS
Trigger: CGACCAGCCACCATTGGTTCAGGCAATCTTCAGCGG...AGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACTTCAGTTTTATGGATaGGCATCCGGATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSLQFYG*ASGSPL
Trigger: CAGAGGAGATCCGGATGCTCATCCATAAAACTGAAG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp TTGTCCCTTGCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTGCTTCTTTGGCTGCTGCCACATaGAGAGGGGTCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LSLALTSAECLIKTCTASLAAAT*RGVCQF
Trigger: GAACTGGCAGACCCCTCTTCATGTGGCAGCAGCCAA...AGAAGCAGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCAAGGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR TCA 90 bp CACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGTGCTCGGTCGGAGACATTaGCACTGCTCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: HKAIFANRSIPTSMAMLVLGRRH*HCSAGE
Trigger: TTCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAG...CACCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp CACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGTGGGGTCTGTGACCGTGTaGACCTTCCATGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: HKAIFANRSIPTSMAMLVGSVTV*TFHGQL
Trigger: CAGCTGTCCATGGAAGGTTCACACGGTCACAGACCC...CACCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp CTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTCTGCAGCAGTCAGAGTaGGCATTTAGGGCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: LIHNWSLRVPVLQPTDVLLQQSE*AFRAAK
Trigger: TTTAGCTGCCCTAAATGCTCACTCTGACTGCTGCAG...AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp GAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATGGCCTTTCTCATCCCTaGTGTCCAGGTCCACCAACG +
Preference number: 4 (lower is better)
Translates to: EFPVSCSQLENKGCVLPNGLSHP*CPGPPT
Trigger: CGTTGGTGGACCTGGACATCAGGGATGAGAAAGGCC...ATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACTCGCGCGCACACACATaGAGGTCCCCGGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNSRAHT*RSPARR
Trigger: TCTGCGGGCCGGGGACCTGCATGTGTGTGCGCGCGA...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282272.15
CDS-3UTR GCA 90 bp GACATTGACACTGCTCAGCAGGGGAATGATCACTTCTGCACATTTGACAGCCTTATCACCGCTGAAGATTaGCTGAACCAATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DIDTAQQGNDHFCTFDSLITAED*LNQWWL
Trigger: CAGCCACCATTGGTTCAGGCAATCTTCAGCGGTGAT...AAGGCTGTCAAATGTGCAGAAGTGATCATTCCCCTGCTGAGCAGTGTCAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTGAGTTCAATGATCTCTaGATCTCCCAGAAATGCGGC +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLEFNDL*ISQKCG
Trigger: GCCGCATTTCTGGGAGATGCAGAGATCATTGAACTC...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTGTGGCCCATGTATGCTaGCCAGTGCAGAGCACGCCG +
Preference number: 4 (lower is better)
Translates to: YLLHGRIFLAVFPLEAIIVAHVC*PVQSTP
Trigger: CGGCGTGCTCTGCACTGGGCAGCATACATGGGCCAC...AATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACTTACAGGTCACTTCTaGGCCATGGTTAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPLTGHF*AMVNEQ
Trigger: TTGCTCATTAACCATGGCGCAGAAGTGACCTGTAAG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACCTTACAGGTCACTTCTaGGCCATGGTTAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDLTGHF*AMVNEQ
Trigger: TTGCTCATTAACCATGGCGCAGAAGTGACCTGTAAG...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTGAGGCAGCAGCAAAATaGAAAGGGGTGAACCCATTA +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLEAAAK*KGVNPL
Trigger: TAATGGGTTCACCCCTTTGCATTTTGCTGCTGCCTC...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTGGACAGCTGTCATGTaGAGTGGACTTTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLWTAVM*SGLLPS
Trigger: AGATGGCAAAAGTCCACTGCACATGACAGCTGTCCA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCATGGAGAGGAGTGTTaGCGTCCTTATCCACACAGT +
Preference number: 4 (lower is better)
Translates to: VYTNFHGNAGVRRQKWYCHGEEC*RPYPHS
Trigger: ACTGTGTGGATAAGGACGGCAACACTCCTCTCCATG...GCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACTTTTTATGGAAATCTaGTCCGCTGCTCTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPLFMEI*SAALQE
Trigger: CTCTTGCAGAGCAGCGGAGCAGATTTCCATAAAAAG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACCTTTTTATGGAAATCTaGTCCGCTGCTCTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDLFMEI*SAALQE
Trigger: CTCTTGCAGAGCAGCGGAGCAGATTTCCATAAAAAG...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAATGACAATTCGCAGCTaGATAGTGCAAAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSMTIRS*IVQRGP
Trigger: AGGACCCCTTTGCACTATGCAGCTGCGAATTGTCAT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCGTAATGCAAAGCTGTaGGTCCCCAGTCATCTGTTT +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLRNAKL*VPSHLF
Trigger: AAACAGATGACTGGGGACGCACAGCTTTGCATTACG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGGTGGCCACGAGCAGCTaGATAGTGCAAGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTVATSS*IVQGRP
Trigger: AGGACGCCCTTGCACTATGCAGCTGCTCGTGGCCAC...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTCACATGATCAGCAAATaGTGCCGCATGAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LIHNWSLRVPVLQPTDVLHMISK*CRMKGC
Trigger: ACACCCCTTCATGCGGCAGCATTTGCTGATCATGTG...AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp AACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCAATATCCACAGCGCCTaGCTGCCCATTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NPLRSVAGIKCILIHNWSNIHSA*LPILSS
Trigger: GCTGCTGAGAATGGGCAGGCAGGCGCTGTGGATATT...GGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp AAAGCCTTCACTCTGCCACTGATTACCACACACACACACACACACACACACACAGCCACATGTTGTCCTTaGCATTTACACGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KAFTLPLITTHTHTHTHTATCCP*HLHELL
Trigger: CAGGAGCTCGTGTAAATGCCAAGGACAACATGTGGC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGGTAATCAGTGGCAGAGTGAAGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAGTCACTTCTGCGCCATaGTTAATGAGCAATGCTACA +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPVTSAP*LMSNAT
Trigger: TGTAGCATTGCTCATTAACCATGGCGCAGAAGTGAC...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp ACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTATATATCTTGCAGCCACATaGAGAGGAGTGTTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: TNFHGNAGVRRQKWYCLIYLAAT*RGVLPS
Trigger: GGACGGCAACACTCCTCTCCATGTGGCTGCAAGATA...TATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATTTCCTTCAGCTCCCTaGCTCTTTCAAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPFPSAP*LFQVLL
Trigger: CAGAAGAACTTGAAAGAGCCAGGGAGCTGAAGGAAA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGAACTCTAGACATAGTGTaGCTTCCTTTTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGTLDIV*LPFPSA
Trigger: AGCTGAAGGAAAAGGAAGCCACACTATGTCTAGAGT...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTGTGGTGTTTGTCCTTTaGCATCTTTCACATCGACCG +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLVVFVL*HLSHRP
Trigger: CGGTCGATGTGAAAGATGCCAAAGGACAAACACCAC...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATACTGCAAGCATCAGTaGTGTTTGTCCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPYCKHQ*CLSFGI
Trigger: GATGCCAAAGGACAAACACCACTGATGCTTGCAGTA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAAGGGCGTCCTCCCTCTaGAATCTTTACAGAGAATTG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSRASSL*NLYREL
Trigger: CAATTCTCTGTAAAGATTCCAGAGGGAGGACGCCCT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCATTGCGCGCAGCGACGTaGAGGGGTGTCTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSLRAAT*RGVCSA
Trigger: TGCACTGCAGACACCCCTCCACGTCGCTGCGCGCAA...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTTTGCGCGCAGCGACGTaGAGGGGTGTCTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALILRAAT*RGVCSA
Trigger: TGCACTGCAGACACCCCTCCACGTCGCTGCGCGCAA...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTCAGTTTTATGGATaGGCATCCGGATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VYTNFHGNAGVRRQKWYCLQFYG*ASGSPL
Trigger: CAGAGGAGATCCGGATGCTCATCCATAAAACTGAAG...GCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp TTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACTCTGCCACAGAAATGCGGCCACATaGAGAGGGGTTCGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LEGRLIICSDSRKPSLCHRNAAT*RGVRFS
Trigger: TGAGAAACGAACCCCTCTTCATGTGGCCGCATTTCT...GTGGCAGAGTGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATGCATTGACATCAGCTaGGTGCTTAATCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPCIDIS*VLNQNL
Trigger: CAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp AAACCTGTACTGCTTCTTCACTTCTGGAAGCAACAGCCCGGTGCAGTGGAGTCATGCATTGACATCAGCTaGGTGCTTAATCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: KPVLLLHFWKQQPGAVESCIDIS*VLNQNL
Trigger: CAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCA...TGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAGTACAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR TCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACTTGGCTGCTGCCACATaGAGAGGGGTCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHLAAAT*RGVCQF
Trigger: GAACTGGCAGACCCCTCTTCATGTGGCAGCAGCCAA...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGTTGGCTGCTGCCACATaGAGAGGGGTCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVLAAAT*RGVCQF
Trigger: GAACTGGCAGACCCCTCTTCATGTGGCAGCAGCCAA...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp AGGGTGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTTATTTCCATAGACATTaGTTTCATCAATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: RVRASQSQTGKANPVTPFYFHRH*FHQSPP
Trigger: GGGTGGAGATTGATGAAATCAATGTCTATGGAAATA...AAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCATTGCCATCTTTACTCTaGATGTTAACATCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSLPSLL*MLTSAP
Trigger: CGGGGCAGATGTTAACATTCAGAGTAAAGATGGCAA...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATACTGAATGAGGGTCTGTaGCCGTGTGAACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: SILVLMCSWLMNYTHTHILNEGL*PCEPSM
Trigger: CATGGAAGGTTCACACGGTCACAGACCCTCATTCAG...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTATTTCTATCCATGTCTaGTGCAGCGGCGTAATGCAA +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLISIHV*CSGVMQ
Trigger: TTGCATTACGCCGCTGCATCAGACATGGATAGAAAT...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTAGCCTTGGTTATCTTTaGAACAACAGTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLSLGYL*NNSPPQ
Trigger: CTGAGGAGGACTGTTGTTTCAAAGATAACCAAGGCT...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp TCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACAGACAGGCAAGGCGATGTCATCTCTACAACTaGCGATACTGGAATCTATGG +
Preference number: 4 (lower is better)
Translates to: SQLENKGCVLPNHRQARRCHLYN*RYWNLW
Trigger: CCATAGATTCCAGTATCGTCAGTTGTAGAGATGACA...TCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATATGCAAGCACTCCACATaGTCAGCAAATGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SILVLMCSWLMNYTHTHICKHST*SANAAA
Trigger: TGCGGCAGCATTTGCTGATCATGTGGAGTGCTTGCA...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACTGCAAGCACTCCACATaGTCAGCAAATGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: FPVSCSQLENKGCVLPNHCKHST*SANAAA
Trigger: TGCGGCAGCATTTGCTGATCATGTGGAGTGCTTGCA...GTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACAGTGCTGTTTTCCCTaGATTATCTACTGCGTTCAC +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSQCCFP*IIYCVH
Trigger: GTGAACGCAGTAGATAATTCAGGGAAAACAGCACTG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACTTTGTCCTCCTTCTATaGGTAAGAGAGTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDFVLLL*VREWEK
Trigger: CTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAA...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAGAAGCAACAGCCCGGTaGAGTGGAGTCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEEATAR*SGVSHM
Trigger: CATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTC...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TTCTTGTCCCTTGCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTGCTAGCCTTGTTGGCTGCTaGCACATGAAGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FLSLALTSAECLIKTCTASLVGC*HMKRGL
Trigger: CAGACCCCTCTTCATGTGGCAGCAGCCAACAAGGCT...AGCAGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR GCA 90 bp TCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGATGTATGCTGCCCAGTaGAGAGCACGCCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: STLTWINGNYLLHGRIFLMYAAQ*RARRSF
Trigger: GAAGGACCGGCGTGCTCTGCACTGGGCAGCATACAT...CAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACCCCAGGTTCAGGAGATaGTTGACAACATTAATCTGT +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDPRFRR*LTTLIC
Trigger: ACAGATTAATGTTGTCAAGCATCTCCTGAACCTGGG...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCGAGGCAGCAGCAAAATaGAAAGGGGTGAACCCATTA +
Preference number: 4 (lower is better)
Translates to: VYTNFHGNAGVRRQKWYCEAAAK*KGVNPL
Trigger: TAATGGGTTCACCCCTTTGCATTTTGCTGCTGCCTC...GCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp GCAGAGTGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATCATGGAGAGGAGTGTTaGCGTCCTTATCCACACAGT +
Preference number: 4 (lower is better)
Translates to: AECNPLRSVAGIKCILIHHGEEC*RPYPHS
Trigger: ACTGTGTGGATAAGGACGGCAACACTCCTCTCCATG...ATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCATCTGCTCCGCTGCTCTaGAAGAGTTTTATACATTCC +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSSAPLL*KSFIHS
Trigger: GGAATGTATAAAACTCTTGCAGAGCAGCGGAGCAGA...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCATTTCACAAAGATGGATaGGCCCTGATTGATAAGCGC +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSFHKDG*ALIDKR
Trigger: GCGCTTATCAATCAGGGCGCATCCATCTTTGTGAAA...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAGTCAATATGTCCATATaGTACTGCAAGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPVNMSI*YCKHQW
Trigger: CCACTGATGCTTGCAGTAGCATATGGACATATTGAC...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACTCTGTGTAAAGCTGTaGATCCTAGGATGTCAACAG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSLCVKL*ILGCQQ
Trigger: CTGTTGACATCCTAGGATGCACAGCTTTACACAGAG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACTCTGCCACGATTGCCTGAACCAATaGTGGCTGGTCGGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LEGRLIICSDSRKPSLCHDCLNQ*WLVGEF
Trigger: AAACTCACCGACCAGCCACCATTGGTTCAGGCAATC...GTGGCAGAGTGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAGAACCCATTATTGTTTaGCTGGTTCACGTTAGCACC +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSEPIIV*LVHVST
Trigger: GGTGCTAACGTGAACCAGCCAAACAATAATGGGTTC...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAAAAGGGAACATGCTATaGATTCCACACTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSKGNML*IPHLAV
Trigger: CACAGCCAAGTGTGGAATCCATAGCATGTTCCCTTT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCTTCCAAATTTATCTaGGGTGTCTATTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: CVLPNHRQARRIRLLPFPSSKFI*GVYFKA
Trigger: GGCTTTGAAATAGACACCCCAGATAAATTTGGAAGA...AGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGACAACAGTGTCTACGTTaGCTTCCTTTTCAAGTAACA +
Preference number: 4 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGQQCLR*LPFQVT
Trigger: TGTTACTTGAAAAGGAAGCCAACGTAGACACTGTTG...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACTATTGCACAGTGCAGTaGAGTAAAGGGATTACCGAT +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDYCTVQ*SKGITD
Trigger: ATCGGTAATCCCTTTACTCCACTGCACTGTGCAATA...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATAGTACACAGGCCCCTTTaGCCAGCAACTCCTCAACTA +
Preference number: 4 (lower is better)
Translates to: SILVLMCSWLMNYTHTHIVHRPL*PATPQL
Trigger: TAGTTGAGGAGTTGCTGGCCAAAGGGGCCTGTGTAC...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGCAGCGGTTCCAGGTGTaGAACGGGGTCCATTTGACC +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTQRFQV*NGVHLT
Trigger: GGTCAAATGGACCCCGTTCCACACCTGGAACCGCTG...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTCCGCTGAAGATTGCCTaGACCAATGGTGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTPLKIA*TNGGWS
Trigger: CGACCAGCCACCATTGGTTCAGGCAATCTTCAGCGG...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp ATCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTCCGCTGAAGATTGCCTaGACCAATGGTGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: IHLNLDKWELSTARKNLFPLKIA*TNGGWS
Trigger: CGACCAGCCACCATTGGTTCAGGCAATCTTCAGCGG...AAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCCGCTGAAGATTGCCTaGACCAATGGTGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALIPLKIA*TNGGWS
Trigger: CGACCAGCCACCATTGGTTCAGGCAATCTTCAGCGG...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCACTCGGTCGGAGACATTaGCACTGCTCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSLGRRH*HCSAGE
Trigger: TTCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAG...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCTCGGTCGGAGACATTaGCACTGCTCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: YLLHGRIFLAVFPLEAIILGRRH*HCSAGE
Trigger: TTCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAG...AATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp CACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGTGTGGCCAAGAGTAAATTaGCCATCTCCACGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: HKAIFANRSIPTSMAMLVWPRVN*PSPRGR
Trigger: ACGGCCACGTGGAGATGGTCAATTTACTCTTGGCCA...CACCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACAAAATGCAAAGGGGTaGACCCATTATTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSQNAKG*THYCLA
Trigger: AGCCAAACAATAATGGGTTCACCCCTTTGCATTTTG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp AACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTGGGTCTGTGACCGTGTaGACCTTCCATGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: NLDKWELSTARKNLFGSIGSVTV*TFHGQL
Trigger: CAGCTGTCCATGGAAGGTTCACACGGTCACAGACCC...AATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAGGGTCTGTGACCGTGTaGACCTTCCATGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSGSVTV*TFHGQL
Trigger: CAGCTGTCCATGGAAGGTTCACACGGTCACAGACCC...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGCTGAATGAGGGTCTGTaGCCGTGTGAACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: CNPLRSVAGIKCILIHNWLNEGL*PCEPSM
Trigger: CATGGAAGGTTCACACGGTCACAGACCCTCATTCAG...CCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACTCTGCCACATTTCACCTCCATTCTaGATGAGGGTCTGTGACCGT +
Preference number: 4 (lower is better)
Translates to: LEGRLIICSDSRKPSLCHISPPF*MRVCDR
Trigger: ACGGTCACAGACCCTCATTCAGAATGGAGGTGAAAT...GTGGCAGAGTGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTTAATCAAAAGCTCATaGCCGTATCTTGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLLIKSS*PYLAAT
Trigger: TGTGGCTGCAAGATACGGTCATGAGCTTTTGATTAA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTGGCCTTTCTCATCCCTaGTGTCCAGGTCCACCAACG +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALIGLSHP*CPGPPT
Trigger: CGTTGGTGGACCTGGACATCAGGGATGAGAAAGGCC...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCGTAAACACAGTGTGTaGCCATTAATTACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLRKHSV*PLITEA
Trigger: TGCCTCAGTAATTAATGGTCACACACTGTGTTTACG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp CTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTAGCCTTGGTTATCTTTaGAACAACAGTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LIHNWSLRVPVLQPTDVLSLGYL*NNSPPQ
Trigger: CTGAGGAGGACTGTTGTTTCAAAGATAACCAAGGCT...AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGGGCCCCAAGCAGCAATaGTGCACAATTCCCATGATC +
Preference number: 4 (lower is better)
Translates to: CNPLRSVAGIKCILIHNWGPKQQ*CTIPMI
Trigger: GATCATGGGAATTGTGCATCATTGCTGCTTGGGGCC...CCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTGTCATCTCTACAACTaGCGATACTGGAATCTATGG +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLCHLYN*RYWNLW
Trigger: CCATAGATTCCAGTATCGTCAGTTGTAGAGATGACA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCAGTTAATGCCTCTGTaGTTTGGGGTATGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VYTNFHGNAGVRRQKWYCQLMPL*FGVCVC
Trigger: ACACACACATACCCCAAATCACAGAGGCATTAACTG...GCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTGAAGCAACAGCCCGGTaGAGTGGAGTCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSEATAR*SGVSHM
Trigger: CATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTC...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGAGCCTTGTTGGCTGCTaGCACATGAAGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: NTKPYLLIGLYQLPWQCWSLVGC*HMKRGL
Trigger: CAGACCCCTCTTCATGTGGCAGCAGCCAACAAGGCT...CCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACGTGGCCCATGTATGCTaGCCAGTGCAGAGCACGCCG +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNVAHVC*PVQSTP
Trigger: CGGCGTGCTCTGCACTGGGCAGCATACATGGGCCAC...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCAAGTGGCCCATGTATaGTGCCCAGTGCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: YLLHGRIFLAVFPLEAIIQVAHV*CPVQST
Trigger: CGTGCTCTGCACTGGGCAGCATACATGGGCCACTTG...AATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCCAGGTTCAGGAGATaGTTGACAACATTAATCTGT +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSPRFRR*LTTLIC
Trigger: ACAGATTAATGTTGTCAAGCATCTCCTGAACCTGGG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACTCTGCCACTGGACAGCTGTCATGTaGAGTGGACTTTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: LEGRLIICSDSRKPSLCHWTAVM*SGLLPS
Trigger: AGATGGCAAAAGTCCACTGCACATGACAGCTGTCCA...GTGGCAGAGTGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACAATGTAAAGGGAACATaGTATGGATTCCACACTTGG +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDNVKGT*YGFHTW
Trigger: CCAAGTGTGGAATCCATAGCATGTTCCCTTTACATT...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAATGATAACAACTTTCTaGAGCAGTCAGAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPMITTF*SSQSEH
Trigger: ATGCTCACTCTGACTGCTGCAGAAAGTTGTTATCAT...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp AAAGCCTTCACTCTGCCACTGATTACCACACACACACACACACACACACACACATCTGCTCCGCTGCTCTaGAAGAGTTTTATACATTCC +
Preference number: 4 (lower is better)
Translates to: KAFTLPLITTHTHTHTHTSAPLL*KSFIHS
Trigger: GGAATGTATAAAACTCTTGCAGAGCAGCGGAGCAGA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGGTAATCAGTGGCAGAGTGAAGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACCGGCAGCATAATGTATaGTATTGTAACCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RRRASRLQCLLSSKLATDRQHNV*YCNLPC
Trigger: ACAAGGAAGGTTACAATAGCATACATTATGCTGCCG...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAATGTCCATATGCTACTaGAAGCATCAGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSMSICY*KHQWCL
Trigger: CAAACACCACTGATGCTTGCAGTAGCATATGGACAT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTAGTGGCCACGAGCAGCTaGATAGTGCAAGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLVATSS*IVQGRP
Trigger: AGGACGCCCTTGCACTATGCAGCTGCTCGTGGCCAC...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTATGATCATTGATTATTaGACAGTGCAGTGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: CVLPNHRQARRIRLLPFPMIIDY*TVQWSK
Trigger: TTTACTCCACTGCACTGTGCAATAATCAATGATCAT...AGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATACACATGATCAGCAAATaGTGCCGCATGAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SILVLMCSWLMNYTHTHIHMISK*CRMKGC
Trigger: ACACCCCTTCATGCGGCAGCATTTGCTGATCATGTG...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCACCACCTTTAAGCCATTaGGCGCAGCGACGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSAPPLSH*AQRRGG
Trigger: CCCTCCACGTCGCTGCGCGCAATGGCTTAAAGGTGG...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTACCACCTTTAAGCCATTaGGCGCAGCGACGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLPPLSH*AQRRGG
Trigger: CCCTCCACGTCGCTGCGCGCAATGGCTTAAAGGTGG...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp GTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGGTGCCTGTTGTCTATTTCAAAGCCTaGAGACAGCACGTGCTCATT +
Preference number: 4 (lower is better)
Translates to: VAGIKCILIHNWSLRVPVVYFKA*RQHVLI
Trigger: AATGAGCACGTGCTGTCTGCAGGCTTTGAAATAGAC...AACAGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTGATTGCCTGAACCAATaGTGGCTGGTCGGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: CTEESFWQYSHLRQLFHRDCLNQ*WLVGEF
Trigger: AAACTCACCGACCAGCCACCATTGGTTCAGGCAATC...ACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp CACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGTGCATCCGGATCTCCTCTaGATCACCGCTGAAGATTGC +
Preference number: 4 (lower is better)
Translates to: HKAIFANRSIPTSMAMLVHPDLL*ITAEDC
Trigger: GCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATG...CACCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp CAGTTCTTGTCCCTTGCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTCATCCGGATCTCCTCTaGATCACCGCTGAAGATTGC +
Preference number: 4 (lower is better)
Translates to: QFLSLALTSAECLIKTCTHPDLL*ITAEDC
Trigger: GCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATG...AGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAAACAGCCCGGTGCAGTaGAGTCAGCCACATGTTGTC +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTENSPVQ*SQPHVV
Trigger: GACAACATGTGGCTGACTCCACTGCACCGGGCTGTT...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp ATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCAACAGCCCGGTGCAGTaGAGTCAGCCACATGTTGTC +
Preference number: 4 (lower is better)
Translates to: IYCTEESFWQYSHLRQLFNSPVQ*SQPHVV
Trigger: GACAACATGTGGCTGACTCCACTGCACCGGGCTGTT...GAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGAACAGCCCGGTGCAGTaGAGTCAGCCACATGTTGTC +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVNSPVQ*SQPHVV
Trigger: GACAACATGTGGCTGACTCCACTGCACCGGGCTGTT...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TTGTCCCTTGCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTGCTTCTCTGCTTCTTCACTTCTaGAAGCAACAGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LSLALTSAECLIKTCTASLLLHF*KQQPGA
Trigger: TGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAG...AGAAGCAGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCAAGGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTTTGACCATCTCCACGTaGCCGTTCAGAGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSLTIST*PFRAAW
Trigger: CCATGCGGCTCTGAACGGCCACGTGGAGATGGTCAA...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTTTGACCATCTCCACGTaGCCGTTCAGAGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: NLDKWELSTARKNLFGSILTIST*PFRAAW
Trigger: CCATGCGGCTCTGAACGGCCACGTGGAGATGGTCAA...AATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp AACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCGTGTGAACCTTCCATaGACAGCTGTCATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: NPLRSVAGIKCILIHNWSRVNLP*TAVMCS
Trigger: ACTGCACATGACAGCTGTCCATGGAAGGTTCACACG...GGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGTATGGATTCCACACTTaGCTGTGTCAGCTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMYGFHT*LCQLRW
Trigger: CCAGCGGAGCTGACACAGCCAAGTGTGGAATCCATA...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp GTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGGTGCCTGTTAAAGGGAACATGCTATaGATTCCACACTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VAGIKCILIHNWSLRVPVKGNML*IPHLAV
Trigger: CACAGCCAAGTGTGGAATCCATAGCATGTTCCCTTT...AACAGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAACTCTAGACATAGTGTaGCTTCCTTTTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSTLDIV*LPFPSA
Trigger: AGCTGAAGGAAAAGGAAGCCACACTATGTCTAGAGT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGGTGGTGTTTGTCCTTTaGCATCTTTCACATCGACCG +
Preference number: 4 (lower is better)
Translates to: LRSVAGIKCILIHNWSLRVVFVL*HLSHRP
Trigger: CGGTCGATGTGAAAGATGCCAAAGGACAAACACCAC...CCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACAACAGTGTCTACGTTaGCTTCCTTTTCAAGTAACA +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPQQCLR*LPFQVT
Trigger: TGTTACTTGAAAAGGAAGCCAACGTAGACACTGTTG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTATTGCACAGTGCAGTaGAGTAAAGGGATTACCGAT +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLYCTVQ*SKGITD
Trigger: ATCGGTAATCCCTTTACTCCACTGCACTGTGCAATA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTTGGCCCTTGGGCTTTTaGCTAGCCCAGGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSWPLGF*LAQGQV
Trigger: CACTTGACCCTGGGCTAGCCAAAAGCCCAAGGGCCA...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACCCATGCTACCCAGATTaGAGAGGGTCGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHPCYPD*RGSSCS
Trigger: TGAGCAGGACGACCCTCTCCAATCTGGGTAGCATGG...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR TCA 90 bp GAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTATTTTTTTGGCTGCTGCCACATaGAGAGGGGTCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: EESFWQYSHLRQLFHRIFLAAAT*RGVCQF
Trigger: GAACTGGCAGACCCCTCTTCATGTGGCAGCAGCCAA...AAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp GCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTGCTTCTTCACTTCTGTCACTTCTGCACATTTaGCAGCCTTGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALTSAECLIKTCTASSLLSLLHI*QPCWLL
Trigger: CAGCAGCCAACAAGGCTGTCAAATGTGCAGAAGTGA...CAGAAGTGAAGAAGCAGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR TCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCACTCGGTCGGAGACATTaGCACTGCTCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSALGRRH*HCSAGE
Trigger: TTCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAG...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGTGGCCAAGAGTAAATTaGCCATCTCCACGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVWPRVN*PSPRGR
Trigger: ACGGCCACGTGGAGATGGTCAATTTACTCTTGGCCA...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATATTTCCATAGACATTaGTTTCATCAATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPYFHRH*FHQSPP
Trigger: GGGTGGAGATTGATGAAATCAATGTCTATGGAAATA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp AACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGCTGAATGAGGGTCTGTaGCCGTGTGAACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: NTKPYLLIGLYQLPWQCWLNEGL*PCEPSM
Trigger: CATGGAAGGTTCACACGGTCACAGACCCTCATTCAG...CCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCTTAATCAAAAGCTCATaGCCGTATCTTGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: VYTNFHGNAGVRRQKWYCLIKSS*PYLAAT
Trigger: TGTGGCTGCAAGATACGGTCATGAGCTTTTGATTAA...GCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACCCTGCAGCAGCAGCATaGAGGCACGTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHPAAAA*RHVLPN
Trigger: ATTTGGAAGAACGTGCCTTCATGCTGCTGCTGCAGG...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGATTTCTATCCATGTCTaGTGCAGCGGCGTAATGCAA +
Preference number: 4 (lower is better)
Translates to: LRSVAGIKCILIHNWSLRISIHV*CSGVMQ
Trigger: TTGCATTACGCCGCTGCATCAGACATGGATAGAAAT...CCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATCTTTCAAGTTCTTCTaGATTATCATGGGCATTTCC +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPSFKFF*IIMGIS
Trigger: GGAAATGCCCATGATAATTCAGAAGAACTTGAAAGA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAGGATTTGCATCATTTTaGAGCAGAAACTCTAGACAT +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPGFASF*SRNSRH
Trigger: ATGTCTAGAGTTTCTGCTTCAAAATGATGCAAATCC...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAAGTAGCACCAGAATCTaGTTCTTCAAATCCACTGTT +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSSSTRI*FFKSTV
Trigger: AACAGTGGATTTGAAGAATCAGATTCTGGTGCTACT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAGGCCTTTCTCATCCCTaGTGTCCAGGTCCACCAACG +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSAGLSHP*CPGPPT
Trigger: CGTTGGTGGACCTGGACATCAGGGATGAGAAAGGCC...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAGATGCACAATTCCCATaGTCATTGATTATTGCACAG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSDAQFP*SLIIAQ
Trigger: CTGTGCAATAATCAATGATCATGGGAATTGTGCATC...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGGGCCCCAAGCAGCAATaGTGCACAATTCCCATGATC +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTGPKQQ*CTIPMI
Trigger: GATCATGGGAATTGTGCATCATTGCTGCTTGGGGCC...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGCCCCAAGCAGCAATaGTGCACAATTCCCATGATC +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVGPKQQ*CTIPMI
Trigger: GATCATGGGAATTGTGCATCATTGCTGCTTGGGGCC...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTGCAAATGCTGCCGCATaGAGGGGTGTCCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITANAAA*RGVLPL
Trigger: CAAAGGCAGGACACCCCTTCATGCGGCAGCATTTGC...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAATGCAAGCACTCCACATaGTCAGCAAATGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTECKHST*SANAAA
Trigger: TGCGGCAGCATTTGCTGATCATGTGGAGTGCTTGCA...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGCAACGCGGAAGAACCTaGGGGTCATCTGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVQRGRT*GSSGNL
Trigger: AAGGTTTCCAGATGACCCTCAGGTTCTTCCGCGTTG...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAACGGGGTCCATTTaGCCTAGAAGCTTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVGTGSI*PRSFGR
Trigger: TCTGCCAAAGCTTCTAGGTCAAATGGACCCCGTTCC...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp GAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTATTTTTGAAGCAACAGCCCGGTaGAGTGGAGTCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: EESFWQYSHLRQLFHRIFEATAR*SGVSHM
Trigger: CATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTC...AAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTAATCAAAACCTGTACTaGTTCTTCACTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLNQNLY*FFTSGS
Trigger: GCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGATT...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp ATCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTAGCCTTGTTGGCTGCTaGCACATGAAGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: IHLNLDKWELSTARKNLFSLVGC*HMKRGL
Trigger: CAGACCCCTCTTCATGTGGCAGCAGCCAACAAGGCT...AAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAATGTATGCTGCCCAGTaGAGAGCACGCCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSAMYAAQ*RARRSF
Trigger: GAAGGACCGGCGTGCTCTGCACTGGGCAGCATACAT...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTCAAGTGGCCCATGTATaGTGCCCAGTGCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITQVAHV*CPVQST
Trigger: CGTGCTCTGCACTGGGCAGCATACATGGGCCACTTG...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGCTGTCCATTGGAGGCTaGAGCATGCAGAGGGGTATA +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTLSIGG*SMQRGI
Trigger: TATACCCCTCTGCATGCTGCAGCCTCCAATGGACAG...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATAGAGGCAGCAGCAAAATaGAAAGGGGTGAACCCATTA +
Preference number: 4 (lower is better)
Translates to: SILVLMCSWLMNYTHTHIEAAAK*KGVNPL
Trigger: TAATGGGTTCACCCCTTTGCATTTTGCTGCTGCCTC...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AAGAGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCTCATGACCGTATCTTaGAGCCACATGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KRNFQYLVPSWKIKGACFLMTVS*SHMERS
Trigger: ACTCCTCTCCATGTGGCTGCAAGATACGGTCATGAG...GAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAAATGTAAAGGGAACATaGTATGGATTCCACACTTGG +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSNVKGT*YGFHTW
Trigger: CCAAGTGTGGAATCCATAGCATGTTCCCTTTACATT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp AGGCAGAAATGGTACTGCCTTATATCGATGACTACCATGCTTTTGTGCTGTGCTATGACAATTCGCAGCTaGATAGTGCAAAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RQKWYCLISMTTMLLCCAMTIRS*IVQRGP
Trigger: AGGACCCCTTTGCACTATGCAGCTGCGAATTGTCAT...AGCACAGCACAAAAGCATGGTAGTCATCGATATAAGGCAGTACCATTTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACCGGATAGATGGATTTaGATCATTTTGAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPPDRWI*IILKQK
Trigger: TTTCTGCTTCAAAATGATGCAAATCCATCTATCCGG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCGGCAGCATAATGTATaGTATTGTAACCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLRQHNV*YCNLPC
Trigger: ACAAGGAAGGTTACAATAGCATACATTATGCTGCCG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp AAGAGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCATGATCAGCAAATGCTaGCGCATGAAGGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: KRNFQYLVPSWKIKGACFMISKC*RMKGCP
Trigger: AGGACACCCCTTCATGCGGCAGCATTTGCTGATCAT...GAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCATCTGGGAAACTGATTTaGAAAACTGTCATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPSGKLI*KTVIFQ
Trigger: CTGGAAAATGACAGTTTTGCAAATCAGTTTCCCAGA...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp TTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGCCTGCAGACAGCACGTaGTCATTACTAAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: LRSVAGIKCILIHNWSLRPADST*SLLNKD
Trigger: ATCCTTGTTTAGTAATGAGCACGTGCTGTCTGCAGG...CCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCAGGGTGCCTGTTTTaGAGCCAACCGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: CNPLRSVAGIKCILIHNWSGCLF*SQPMFL
Trigger: CAAGAACATCGGTTGGCTGCAAAACAGGCACCCTGA...CCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp GTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACAGACAGAAAATAAAGGGTGCGTaGTTCCCAATCACAGACAGG +
Preference number: 4 (lower is better)
Translates to: VSCSQLENKGCVLPNHRQKIKGA*FPITDR
Trigger: CCTGTCTGTGATTGGGAAGCACGCACCCTTTATTTT...CTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TCAGCTGAGTGCTTAATCAAAACCTGTACTGCTTCTTCACTTCTGGAAGCAACAGATTGCCTGAACCAATaGTGGCTGGTCGGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: SAECLIKTCTASSLLEATDCLNQ*WLVGEF
Trigger: AAACTCACCGACCAGCCACCATTGGTTCAGGCAATC...TGTTGCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGATTAAGCACTCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACCTGCTTCTTCACTTCTaGAAGCAACAGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHLLLHF*KQQPGA
Trigger: TGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAG...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp GATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTCTGCTTCTTCACTTCTaGAAGCAACAGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: DKWELSTARKNLFGSIPTLLLHF*KQQPGA
Trigger: TGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAG...AGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp ATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGTTGACCATCTCCACGTaGCCGTTCAGAGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: MGSKHKAIFANRSIPTSMLTIST*PFRAAW
Trigger: CCATGCGGCTCTGAACGGCCACGTGGAGATGGTCAA...CATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp TTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGGAACCCATTATTGTTTaGCTGGTTCACGTTAGCACC +
Preference number: 4 (lower is better)
Translates to: LRSVAGIKCILIHNWSLREPIIV*LVHVST
Trigger: GGTGCTAACGTGAACCAGCCAAACAATAATGGGTTC...CCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGCGTGTGAACCTTCCATaGACAGCTGTCATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMRVNLP*TAVMCS
Trigger: ACTGCACATGACAGCTGTCCATGGAAGGTTCACACG...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGTATCTTGCAGCCACATaGAGAGGAGTGTTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: STLTWINGNYLLHGRIFLYLAAT*RGVLPS
Trigger: GGACGGCAACACTCCTCTCCATGTGGCTGCAAGATA...CAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGTATGGATTCCACACTTaGCTGTGTCAGCTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVYGFHT*LCQLRW
Trigger: CCAGCGGAGCTGACACAGCCAAGTGTGGAATCCATA...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp GTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGGTGCCTGTTACTCTAGACATAGTGTaGCTTCCTTTTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VAGIKCILIHNWSLRVPVTLDIV*LPFPSA
Trigger: AGCTGAAGGAAAAGGAAGCCACACTATGTCTAGAGT...AACAGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCTTGTCCCGGATAGATaGATTTGCATCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLLVPDR*ICIILK
Trigger: CTTCAAAATGATGCAAATCCATCTATCCGGGACAAG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp CTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTTATTGCACAGTGCAGTaGAGTAAAGGGATTACCGAT +
Preference number: 4 (lower is better)
Translates to: LIHNWSLRVPVLQPTDVLYCTVQ*SKGITD
Trigger: ATCGGTAATCCCTTTACTCCACTGCACTGTGCAATA...AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAGTACACAGGCCCCTTTaGCCAGCAACTCCTCAACTA +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEVHRPL*PATPQL
Trigger: TAGTTGAGGAGTTGCTGGCCAAAGGGGCCTGTGTAC...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCACAGCGGTTCCAGGTGTaGAACGGGGTCCATTTGACC +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSAQRFQV*NGVHLT
Trigger: GGTCAAATGGACCCCGTTCCACACCTGGAACCGCTG...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTTGGCCCTTGGGCTTTTaGCTAGCCCAGGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITWPLGF*LAQGQV
Trigger: CACTTGACCCTGGGCTAGCCAAAAGCCCAAGGGCCA...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTATTCTGATTCATAATTaGTCCCTCAGGGTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LIHNWSLRVPVLQPTDVLILIHN*SLRVPV
Trigger: AACAGGCACCCTGAGGGACCAATTATGAATCAGAAT...AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp ACATCAGCTGAGTGCTTAATCAAAACCTGTACTGCTTCTTCACTTCTGGAAGCAGCCACATGTTGTCCTTaGCATTTACACGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TSAECLIKTCTASSLLEAATCCP*HLHELQ
Trigger: CTGGAGCTCGTGTAAATGCCAAGGACAACATGTGGC...TGCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGATTAAGCACTCAGCTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR TCA 90 bp TGTCTTAAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCGCTGAAGATTGCCTaGACCAATGGTGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: CLKYILEGRLIICSDSRKPLKIA*TNGGWS
Trigger: CGACCAGCCACCATTGGTTCAGGCAATCTTCAGCGG...CTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTTAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp AACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCTCTGGATCACCGCTaGAGATTGCCTGAACCAATG +
Preference number: 4 (lower is better)
Translates to: NLDKWELSTARKNLFGSIPLDHR*RLPEPM
Trigger: CATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGG...AATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp TCAGCTGAGTGCTTAATCAAAACCTGTACTGCTTCTTCACTTCTGGAAGCAACACTTCAGTTTTATGGATaGGCATCCGGATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SAECLIKTCTASSLLEATLQFYG*ASGSPL
Trigger: CAGAGGAGATCCGGATGCTCATCCATAAAACTGAAG...TGTTGCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGATTAAGCACTCAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR TCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGAGAAATGCGGCCACATaGAGAGGGGTTCGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTRNAAT*RGVRFS
Trigger: TGAGAAACGAACCCCTCTTCATGTGGCCGCATTTCT...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACTCACTTCTGCACATTTaGCAGCCTTGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHSLLHI*QPCWLL
Trigger: CAGCAGCCAACAAGGCTGTCAAATGTGCAGAAGTGA...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTTCACTTCTGCACATTTaGCAGCCTTGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LNLDKWELSTARKNLFGSSLLHI*QPCWLL
Trigger: CAGCAGCCAACAAGGCTGTCAAATGTGCAGAAGTGA...ACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGTCACTTCTGCACATTTaGCAGCCTTGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVSLLHI*QPCWLL
Trigger: CAGCAGCCAACAAGGCTGTCAAATGTGCAGAAGTGA...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp ATCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTTGGCCAAGAGTAAATTaGCCATCTCCACGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: IHLNLDKWELSTARKNLFWPRVN*PSPRGR
Trigger: ACGGCCACGTGGAGATGGTCAATTTACTCTTGGCCA...AAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTTGGCCAAGAGTAAATTaGCCATCTCCACGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALIWPRVN*PSPRGR
Trigger: ACGGCCACGTGGAGATGGTCAATTTACTCTTGGCCA...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATATTGCCATCTTTACTCTaGATGTTAACATCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SILVLMCSWLMNYTHTHILPSLL*MLTSAP
Trigger: CGGGGCAGATGTTAACATTCAGAGTAAAGATGGCAA...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp AACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCTGAATGAGGGTCTGTaGCCGTGTGAACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: NLDKWELSTARKNLFGSILNEGL*PCEPSM
Trigger: CATGGAAGGTTCACACGGTCACAGACCCTCATTCAG...AATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp AACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGCTGCAGCAGTCAGAGTaGGCATTTAGGGCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: NTKPYLLIGLYQLPWQCWLQQSE*AFRAAK
Trigger: TTTAGCTGCCCTAAATGCTCACTCTGACTGCTGCAG...CCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp GCAGAGTGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATCGTAAACACAGTGTGTaGCCATTAATTACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: AECNPLRSVAGIKCILIHRKHSV*PLITEA
Trigger: TGCCTCAGTAATTAATGGTCACACACTGTGTTTACG...ATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp CTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTGATGCACAATTCCCATaGTCATTGATTATTGCACAG +
Preference number: 4 (lower is better)
Translates to: LIHNWSLRVPVLQPTDVLDAQFP*SLIIAQ
Trigger: CTGTGCAATAATCAATGATCATGGGAATTGTGCATC...AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACCAGTGCTGTTTTCCCTaGATTATCTACTGCGTTCAC +
Preference number: 4 (lower is better)
Translates to: FPVSCSQLENKGCVLPNHQCCFP*IIYCVH
Trigger: GTGAACGCAGTAGATAATTCAGGGAAAACAGCACTG...GTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTAAGGCACATTTTTCATaGCCTTTACTACAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLKAHFS*PLLQAK
Trigger: TTTGGCTTGTAGTAAAGGTCATGAAAAATGTGCCTT...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR TCA 90 bp AAAGCCTTCACTCTGCCACTGATTACCACACACACACACACACACACACACACACGCATACACATTTTGTaGGGAGCATTTCTTATATGG +
Preference number: 4 (lower is better)
Translates to: KAFTLPLITTHTHTHTHTRIHIL*GAFLIW
Trigger: CCATATAAGAAATGCTCCTCACAAAATGTGTATGCG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGGTAATCAGTGGCAGAGTGAAGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTGCCAGGGCCGGGGTATaGCCATTTTCATCTACAGCA +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITARAGV*PFSSTA
Trigger: TGCTGTAGATGAAAATGGTCATACCCCGGCCCTGGC...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCATTGACATCAGCTGAGTaGTTAATCAAAACCTGTACT +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSLTSAE*LIKTCT
Trigger: AGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAA...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATACTTACAGGTCACTTCTaGGCCATGGTTAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: SILVLMCSWLMNYTHTHILTGHF*AMVNEQ
Trigger: TTGCTCATTAACCATGGCGCAGAAGTGACCTGTAAG...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTATACCCAGGTTCAGGAGATaGTTGACAACATTAATCTGT +
Preference number: 4 (lower is better)
Translates to: TNFHGNAGVRRQKWYCLIPRFRR*LTTLIC
Trigger: ACAGATTAATGTTGTCAAGCATCTCCTGAACCTGGG...TATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp GAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATTGGACAGCTGTCATGTaGAGTGGACTTTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: EFPVSCSQLENKGCVLPNWTAVM*SGLLPS
Trigger: AGATGGCAAAAGTCCACTGCACATGACAGCTGTCCA...ATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp CTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTCTCATGACCGTATCTTaGAGCCACATGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LNLDKWELSTARKNLFGSLMTVS*SHMERS
Trigger: ACTCCTCTCCATGTGGCTGCAAGATACGGTCATGAG...ACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGCTCATGACCGTATCTTaGAGCCACATGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTLMTVS*SHMERS
Trigger: ACTCCTCTCCATGTGGCTGCAAGATACGGTCATGAG...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGTTCCACATTACCTCCTaGAGCAGCAGCATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: NTKPYLLIGLYQLPWQCWFHITS*SSSMKA
Trigger: TGCCTTCATGCTGCTGCTGCAGGAGGTAATGTGGAA...CCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp AACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTTTTTATGGAAATCTaGTCCGCTGCTCTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: NPLRSVAGIKCILIHNWSLFMEI*SAALQE
Trigger: CTCTTGCAGAGCAGCGGAGCAGATTTCCATAAAAAG...GGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGATGACAATTCGCAGCTaGATAGTGCAAAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: CNPLRSVAGIKCILIHNWMTIRS*IVQRGP
Trigger: AGGACCCCTTTGCACTATGCAGCTGCGAATTGTCAT...CCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGCGTAATGCAAAGCTGTaGGTCCCCAGTCATCTGTTT +
Preference number: 4 (lower is better)
Translates to: CNPLRSVAGIKCILIHNWRNAKL*VPSHLF
Trigger: AAACAGATGACTGGGGACGCACAGCTTTGCATTACG...CCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp GTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGGTGCCTGTTCGGCAGCATAATGTATaGTATTGTAACCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VAGIKCILIHNWSLRVPVRQHNV*YCNLPC
Trigger: ACAAGGAAGGTTACAATAGCATACATTATGCTGCCG...AACAGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTGTTCCAGCAGCATTTaGACACATTCCTCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CNPLRSVAGIKCILIHNWCSSSI*THSSCP
Trigger: AGGACACGAGGAATGTGTGCAAATGCTGCTGGAACA...CCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCATTGATTATTGCACAGTaGAGTGGAGTAAAGGGATTA +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSLIIAQ*SGVKGL
Trigger: TAATCCCTTTACTCCACTGCACTGTGCAATAATCAA...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAATGATCATTGATTATTaGACAGTGCAGTGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPMIIDY*TVQWSK
Trigger: TTTACTCCACTGCACTGTGCAATAATCAATGATCAT...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR GCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAACACATGATCAGCAAATaGTGCCGCATGAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEHMISK*CRMKGC
Trigger: ACACCCCTTCATGCGGCAGCATTTGCTGATCATGTG...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAAATATCCACAGCGCCTaGCTGCCCATTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSANIHSA*LPILSS
Trigger: GCTGCTGAGAATGGGCAGGCAGGCGCTGTGGATATT...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGGTGGGGCTCTAACCTaGAATGGAAGGCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: MGSKHKAIFANRSIPTSMGGALT*NGRQHG
Trigger: ACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACC...CATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp AGGCAGAAATGGTACTGCCTTATATCGATGACTACCATGCTTTTGTGCTGTGCTCATGCTTTTGTGCTGTaGTTAAAAGCCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RQKWYCLISMTTMLLCCAHAFVL*LKALGG
Trigger: ACCACCCAAGGCTTTTAAGCACAGCACAAAAGCATG...AGCACAGCACAAAAGCATGGTAGTCATCGATATAAGGCAGTACCATTTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp GTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGGTGCCTGTTGTGGCTGGGATAAAGTaGATTCTGATTCATAATTGG +
Preference number: 4 (lower is better)
Translates to: VAGIKCILIHNWSLRVPVVAGIK*ILIHNW
Trigger: CCAATTATGAATCAGAATGCACTTTATCCCAGCCAC...AACAGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCATCCGGATCTCCTCTaGATCACCGCTGAAGATTGC +
Preference number: 4 (lower is better)
Translates to: YLLHGRIFLAVFPLEAIIHPDLL*ITAEDC
Trigger: GCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATG...AATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTCATCCGGATCTCCTCTaGATCACCGCTGAAGATTGC +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTHPDLL*ITAEDC
Trigger: GCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATG...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAGCCACATGTTGTCCTTaGCATTTACACGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEATCCP*HLHELL
Trigger: CAGGAGCTCGTGTAAATGCCAAGGACAACATGTGGC...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TATAGATCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCGCCACATGTTGTCCTTaGCATTTACACGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: YRSTLTWINGNYLLHGRIATCCP*HLHELL
Trigger: CAGGAGCTCGTGTAAATGCCAAGGACAACATGTGGC...GATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGATCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp ATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGAACAGCCCGGTGCAGTaGAGTCAGCCACATGTTGTC +
Preference number: 4 (lower is better)
Translates to: MGSKHKAIFANRSIPTSMNSPVQ*SQPHVV
Trigger: GACAACATGTGGCTGACTCCACTGCACCGGGCTGTT...CATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp AACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGCGTGTGAACCTTCCATaGACAGCTGTCATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: NTKPYLLIGLYQLPWQCWRVNLP*TAVMCS
Trigger: ACTGCACATGACAGCTGTCCATGGAAGGTTCACACG...CCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCTTCCAAATTTATCTaGGGTGTCTATTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLSSKFI*GVYFKA
Trigger: GGCTTTGAAATAGACACCCCAGATAAATTTGGAAGA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAGAAGTGGGGTTCTTTTaGTTACATTGTCTTTCACAA +
Preference number: 4 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSEVGFF*LHCLSQ
Trigger: TTGTGAAAGACAATGTAACCAAAAGAACCCCACTTC...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGGTGGTGTTTGTCCTTTaGCATCTTTCACATCGACCG +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMVVFVL*HLSHRP
Trigger: CGGTCGATGTGAAAGATGCCAAAGGACAAACACCAC...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp GAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCGATACTGGAATCTATaGCCCCAAGCAGCAATGATG +
Preference number: 4 (lower is better)
Translates to: EFPVSCSQLENKGCVLPNRYWNL*PQAAMM
Trigger: CATCATTGCTGCTTGGGGCCATAGATTCCAGTATCG...ATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTGCTGGCTACAGACTGTaGCTGAGCAGTAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSAGYRL*LSSRRC
Trigger: GCATCTTCTACTGCTCAGCCACAGTCTGTAGCCAGC...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGCTGGCTACAGACTGTaGCTGAGCAGTAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTAGYRL*LSSRRC
Trigger: GCATCTTCTACTGCTCAGCCACAGTCTGTAGCCAGC...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGTATCTTGTTCCCAGTTaGAAAATAAAGGGTGCGTGC +
Preference number: 4 (lower is better)
Translates to: LRSVAGIKCILIHNWSLRYLVPS*KIKGAC
Trigger: GCACGCACCCTTTATTTTCCAACTGGGAACAAGATA...CCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp AAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACCTCTGGATCACCGCTaGAGATTGCCTGAACCAATG +
Preference number: 4 (lower is better)
Translates to: KYILEGRLIICSDSRKPSPLDHR*RLPEPM
Trigger: CATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGG...TGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACCTTCAGTTTTATGGATaGGCATCCGGATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHLQFYG*ASGSPL
Trigger: CAGAGGAGATCCGGATGCTCATCCATAAAACTGAAG...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTAGAAATGCGGCCACATaGAGAGGGGTTCGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: YLLHGRIFLAVFPLEAIIRNAAT*RGVRFS
Trigger: TGAGAAACGAACCCCTCTTCATGTGGCCGCATTTCT...AATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp AGGCAGAAATGGTACTGCCTTATATCGATGACTACCATGCTTTTGTGCTGTGCTTGCATTGACATCAGCTaGGTGCTTAATCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: RQKWYCLISMTTMLLCCACIDIS*VLNQNL
Trigger: CAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCA...AGCACAGCACAAAAGCATGGTAGTCATCGATATAAGGCAGTACCATTTCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp AACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCAAAATGCAAAGGGGTaGACCCATTATTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: NPLRSVAGIKCILIHNWSQNAKG*THYCLA
Trigger: AGCCAAACAATAATGGGTTCACCCCTTTGCATTTTG...GGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGTTGCCATCTTTACTCTaGATGTTAACATCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMLPSLL*MLTSAP
Trigger: CGGGGCAGATGTTAACATTCAGAGTAAAGATGGCAA...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp ATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCATTTCACCTCCATTCTaGATGAGGGTCTGTGACCGT +
Preference number: 4 (lower is better)
Translates to: IYCTEESFWQYSHLRQLFISPPF*MRVCDR
Trigger: ACGGTCACAGACCCTCATTCAGAATGGAGGTGAAAT...GAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp AAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACCTGCAGCAGCAGCATaGAGGCACGTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: KYILEGRLIICSDSRKPSPAAAA*RHVLPN
Trigger: ATTTGGAAGAACGTGCCTTCATGCTGCTGCTGCAGG...TGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCTCTTTCAAGTTCTTCTaGATTATCATGGGCATTTCC +
Preference number: 4 (lower is better)
Translates to: VYTNFHGNAGVRRQKWYCSFKFF*IIMGIS
Trigger: GGAAATGCCCATGATAATTCAGAAGAACTTGAAAGA...GCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGGATAACGTCTCATGGTaGGTCACTGCTTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMDNVSW*VTALLK
Trigger: TTTCAGCAAAGCAGTGACTCACCATGAGACGTTATC...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTATCACCGCTGAAGATTaGCTGAACCAATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NLDKWELSTARKNLFGSIITAED*LNQWWL
Trigger: CAGCCACCATTGGTTCAGGCAATCTTCAGCGGTGAT...AATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGGAGTTCAATGATCTCTaGATCTCCCAGAAATGCGGC +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTEFNDL*ISQKCG
Trigger: GCCGCATTTCTGGGAGATGCAGAGATCATTGAACTC...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCACTGTCCATTGGAGGCTaGAGCATGCAGAGGGGTATA +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSALSIGG*SMQRGI
Trigger: TATACCCCTCTGCATGCTGCAGCCTCCAATGGACAG...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp GAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTATTTTTCTGTCCATTGGAGGCTaGAGCATGCAGAGGGGTATA +
Preference number: 4 (lower is better)
Translates to: EESFWQYSHLRQLFHRIFLSIGG*SMQRGI
Trigger: TATACCCCTCTGCATGCTGCAGCCTCCAATGGACAG...AAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp TATAGATCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCGAGGCAGCAGCAAAATaGAAAGGGGTGAACCCATTA +
Preference number: 4 (lower is better)
Translates to: YRSTLTWINGNYLLHGRIEAAAK*KGVNPL
Trigger: TAATGGGTTCACCCCTTTGCATTTTGCTGCTGCCTC...GATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGATCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGTGGACAGCTGTCATGTaGAGTGGACTTTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVWTAVM*SGLLPS
Trigger: AGATGGCAAAAGTCCACTGCACATGACAGCTGTCCA...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp GTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACAGACAGAATGTAAAGGGAACATaGTATGGATTCCACACTTGG +
Preference number: 4 (lower is better)
Translates to: VSCSQLENKGCVLPNHRQNVKGT*YGFHTW
Trigger: CCAAGTGTGGAATCCATAGCATGTTCCCTTTACATT...CTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTTTCCACATTACCTCCTaGAGCAGCAGCATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSFHITS*SSSMKA
Trigger: TGCCTTCATGCTGCTGCTGCAGGAGGTAATGTGGAA...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCTGCTCCGCTGCTCTaGAAGAGTTTTATACATTCC +
Preference number: 4 (lower is better)
Translates to: CNPLRSVAGIKCILIHNWSAPLL*KSFIHS
Trigger: GGAATGTATAAAACTCTTGCAGAGCAGCGGAGCAGA...CCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp ACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTATACGGCAGCATAATGTATaGTATTGTAACCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TNFHGNAGVRRQKWYCLIRQHNV*YCNLPC
Trigger: ACAAGGAAGGTTACAATAGCATACATTATGCTGCCG...TATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAAGGTCCACCAACGACTaGAGAAGGACTTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSARSTND*RRTSKA
Trigger: AGCCTTGGAAGTCCTTCTGCAGTCGTTGGTGGACCT...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTAAGGTCCACCAACGACTaGAGAAGGACTTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLRSTND*RRTSKA
Trigger: AGCCTTGGAAGTCCTTCTGCAGTCGTTGGTGGACCT...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AAGAGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCTTTCACAAAGATGGATaGGCCCTGATTGATAAGCGC +
Preference number: 4 (lower is better)
Translates to: KRNFQYLVPSWKIKGACFFHKDG*ALIDKR
Trigger: GCGCTTATCAATCAGGGCGCATCCATCTTTGTGAAA...GAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACCATGTGCCCACACACTaGCATCATTTCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHHVPTH*HHFSSG
Trigger: ACCTGATGAGAAATGATGGCAGTGTGTGGGCACATG...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAATCCTTTTGGCACATGTaGCCACACACTGCCATCATT +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTESFWHM*PHTAII
Trigger: AATGATGGCAGTGTGTGGGCACATGTGCCAAAAGGA...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGAACAGCTGCCTCTCTaGTGCATTATCCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVEQLPL*CIIPKE
Trigger: TTCTTTGGGGATAATGCAGCAGAGAGGCAGCTGTTC...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR CCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAGATTGCCTGAACCAATaGTGGCTGGTCGGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSDCLNQ*WLVGEF
Trigger: AAACTCACCGACCAGCCACCATTGGTTCAGGCAATC...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCACATCCGGATCTCCTCTaGATCACCGCTGAAGATTGC +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSAHPDLL*ITAEDC
Trigger: GCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATG...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTCTGCTTCTTCACTTCTaGAAGCAACAGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITLLLHF*KQQPGA
Trigger: TGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAG...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGGAACCCATTATTGTTTaGCTGGTTCACGTTAGCACC +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMEPIIV*LVHVST
Trigger: GGTGCTAACGTGAACCAGCCAAACAATAATGGGTTC...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCGTGTGAACCTTCCATaGACAGCTGTCATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: NLDKWELSTARKNLFGSIRVNLP*TAVMCS
Trigger: ACTGCACATGACAGCTGTCCATGGAAGGTTCACACG...AATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTTATCTTGCAGCCACATaGAGAGGAGTGTTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITYLAAT*RGVLPS
Trigger: GGACGGCAACACTCCTCTCCATGTGGCTGCAAGATA...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCTTCTGAATTATCATaGGCATTTCCTAAGATAGTC +
Preference number: 4 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLSSELS*AFPKIV
Trigger: GACTATCTTAGGAAATGCCCATGATAATTCAGAAGA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CCA 90 bp TTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACTCTGCCACCTTGTCCCGGATAGATaGATTTGCATCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LEGRLIICSDSRKPSLCHLVPDR*ICIILK
Trigger: CTTCAAAATGATGCAAATCCATCTATCCGGGACAAG...GTGGCAGAGTGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp GCAGAGTGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATCTTGTCCCGGATAGATaGATTTGCATCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: AECNPLRSVAGIKCILIHLVPDR*ICIILK
Trigger: CTTCAAAATGATGCAAATCCATCTATCCGGGACAAG...ATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGTACTGCAAGCATCAGTaGTGTTTGTCCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMYCKHQ*CLSFGI
Trigger: GATGCCAAAGGACAAACACCACTGATGCTTGCAGTA...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTTCAGAAAGAGCCATTTaGAGCAGCTCGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITSERAI*SSSLSH
Trigger: GTGGCTGAGCGAGCTGCTCCAAATGGCTCTTTCTGA...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACCGATACTGGAATCTATaGCCCCAAGCAGCAATGATG +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHRYWNL*PQAAMM
Trigger: CATCATTGCTGCTTGGGGCCATAGATTCCAGTATCG...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGGTCCTCATGTGTAGCTaGCTGATGAACTACACACAC +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTVLMCS*LMNYTH
Trigger: GTGTGTGTAGTTCATCAGCCAGCTACACATGAGGAC...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCAAAAAGCCTTGGGTGGTaGTGGGGCTCTAACCTGCAA +
Preference number: 4 (lower is better)
Translates to: KYILEGRLIICSDSRKPSKSLGW*WGSNLQ
Trigger: TTGCAGGTTAGAGCCCCACCACCACCCAAGGCTTTT...TGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409153.5
3UTR CAA 72 bp GCTTTGGCAGAGGGAGCAGACACAGTATTCACTATGTaGATTTCATCATCAAGCAACTGGCAATCGGTTTTA +
Preference number: 4 (lower is better)
Translates to: ALAEGADTVFTM*ISSSSNWQSVL
Trigger: TAAAACCGATTGCCAGTTGCTTGATGATGAAATCAACATAGTGAATACTGTGTCTGCTCCCTCTGCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR TCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACCCTCTGGATCACCGCTaGAGATTGCCTGAACCAATG +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNPLDHR*RLPEPM
Trigger: CATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGG...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCACTTCAGTTTTATGGATaGGCATCCGGATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSLQFYG*ASGSPL
Trigger: CAGAGGAGATCCGGATGCTCATCCATAAAACTGAAG...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAATTTCACCTCCATTCTaGATGAGGGTCTGTGACCGT +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSISPPF*MRVCDR
Trigger: ACGGTCACAGACCCTCATTCAGAATGGAGGTGAAAT...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTATTTCACCTCCATTCTaGATGAGGGTCTGTGACCGT +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTISPPF*MRVCDR
Trigger: ACGGTCACAGACCCTCATTCAGAATGGAGGTGAAAT...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCACTGCAGCAGTCAGAGTaGGCATTTAGGGCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSALQQSE*AFRAAK
Trigger: TTTAGCTGCCCTAAATGCTCACTCTGACTGCTGCAG...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGATTTCTATCCATGTCTaGTGCAGCGGCGTAATGCAA +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVISIHV*CSGVMQ
Trigger: TTGCATTACGCCGCTGCATCAGACATGGATAGAAAT...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp GCAGAGTGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATTCTTTCAAGTTCTTCTaGATTATCATGGGCATTTCC +
Preference number: 4 (lower is better)
Translates to: AECNPLRSVAGIKCILIHSFKFF*IIMGIS
Trigger: GGAAATGCCCATGATAATTCAGAAGAACTTGAAAGA...ATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACTCTGCCACGGATTTGCATCATTTTaGAGCAGAAACTCTAGACAT +
Preference number: 4 (lower is better)
Translates to: LEGRLIICSDSRKPSLCHGFASF*SRNSRH
Trigger: ATGTCTAGAGTTTCTGCTTCAAAATGATGCAAATCC...GTGGCAGAGTGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp GCAGAGTGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATGGATTTGCATCATTTTaGAGCAGAAACTCTAGACAT +
Preference number: 4 (lower is better)
Translates to: AECNPLRSVAGIKCILIHGFASF*SRNSRH
Trigger: ATGTCTAGAGTTTCTGCTTCAAAATGATGCAAATCC...ATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTAAAGATGGATGCGCCCTaGTTGATAAGCGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLKMDAP*LISAST
Trigger: TGTGGAAGCGCTTATCAATCAGGGCGCATCCATCTT...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACCAGTGCTGTTTTCCCTaGATTATCTACTGCGTTCAC +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHQCCFP*IIYCVH
Trigger: GTGAACGCAGTAGATAATTCAGGGAAAACAGCACTG...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGAAGGCACATTTTTCATaGCCTTTACTACAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LRSVAGIKCILIHNWSLRKAHFS*PLLQAK
Trigger: TTTGGCTTGTAGTAAAGGTCATGAAAAATGTGCCTT...CCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACGGTGAGTTTGAGCACTaGCATTCTTCCGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNGEFEH*HSSAPS
Trigger: CGAAGGAGCGGAAGAATGGCAGTGCTCAAACTCACC...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTATCACCGCTGAAGATTaGCTGAACCAATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITITAED*LNQWWL
Trigger: CAGCCACCATTGGTTCAGGCAATCTTCAGCGGTGAT...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGATCACCGCTGAAGATTaGCTGAACCAATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: MGSKHKAIFANRSIPTSMITAED*LNQWWL
Trigger: CAGCCACCATTGGTTCAGGCAATCTTCAGCGGTGAT...CATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp AACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTGAGTTCAATGATCTCTaGATCTCCCAGAAATGCGGC +
Preference number: 4 (lower is better)
Translates to: NLDKWELSTARKNLFGSIEFNDL*ISQKCG
Trigger: GCCGCATTTCTGGGAGATGCAGAGATCATTGAACTC...AATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp ATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCTTACAGGTCACTTCTaGGCCATGGTTAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: IYCTEESFWQYSHLRQLFLTGHF*AMVNEQ
Trigger: TTGCTCATTAACCATGGCGCAGAAGTGACCTGTAAG...GAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp TGTCTTAAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCTGTCCATTGGAGGCTaGAGCATGCAGAGGGGTATA +
Preference number: 4 (lower is better)
Translates to: CLKYILEGRLIICSDSRKLSIGG*SMQRGI
Trigger: TATACCCCTCTGCATGCTGCAGCCTCCAATGGACAG...CTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTTAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp AACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTTGGACAGCTGTCATGTaGAGTGGACTTTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: NLDKWELSTARKNLFGSIWTAVM*SGLLPS
Trigger: AGATGGCAAAAGTCCACTGCACATGACAGCTGTCCA...AATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp GAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTATTTTTCATGGAGAGGAGTGTTaGCGTCCTTATCCACACAGT +
Preference number: 4 (lower is better)
Translates to: EESFWQYSHLRQLFHRIFHGEEC*RPYPHS
Trigger: ACTGTGTGGATAAGGACGGCAACACTCCTCTCCATG...AAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTCTCATGACCGTATCTTaGAGCCACATGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITLMTVS*SHMERS
Trigger: ACTCCTCTCCATGTGGCTGCAAGATACGGTCATGAG...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCATGATAACAACTTTCTaGAGCAGTCAGAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: NPLRSVAGIKCILIHNWSMITTF*SSQSEH
Trigger: ATGCTCACTCTGACTGCTGCAGAAAGTTGTTATCAT...GGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTTTCCACATTACCTCCTaGAGCAGCAGCATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITFHITS*SSSMKA
Trigger: TGCCTTCATGCTGCTGCTGCAGGAGGTAATGTGGAA...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGCTTTTTATGGAAATCTaGTCCGCTGCTCTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTLFMEI*SAALQE
Trigger: CTCTTGCAGAGCAGCGGAGCAGATTTCCATAAAAAG...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGCTTTTTATGGAAATCTaGTCCGCTGCTCTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: NTKPYLLIGLYQLPWQCWLFMEI*SAALQE
Trigger: CTCTTGCAGAGCAGCGGAGCAGATTTCCATAAAAAG...CCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTATGACAATTCGCAGCTaGATAGTGCAAAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALIMTIRS*IVQRGP
Trigger: AGGACCCCTTTGCACTATGCAGCTGCGAATTGTCAT...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCACGTAATGCAAAGCTGTaGGTCCCCAGTCATCTGTTT +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSRNAKL*VPSHLF
Trigger: AAACAGATGACTGGGGACGCACAGCTTTGCATTACG...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AAAAAGGCTTTACTTGGGGCGTTACCAATGATAGGAACACAATTTAACAATGAAAGGTCCACCAACGACTaGAGAAGGACTTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: KKALLGALPMIGTQFNNERSTND*RRTSKA
Trigger: AGCCTTGGAAGTCCTTCTGCAGTCGTTGGTGGACCT...TTCATTGTTAAATTGTGTTCCTATCATTGGTAACGCCCCAAGTAAAGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGTTTCACAAAGATGGATaGGCCCTGATTGATAAGCGC +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVFHKDG*ALIDKR
Trigger: GCGCTTATCAATCAGGGCGCATCCATCTTTGTGAAA...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp GAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATATGTCCATATGCTACTaGAAGCATCAGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: EFPVSCSQLENKGCVLPNMSICY*KHQWCL
Trigger: CAAACACCACTGATGCTTGCAGTAGCATATGGACAT...ATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGATGTCCATATGCTACTaGAAGCATCAGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMMSICY*KHQWCL
Trigger: CAAACACCACTGATGCTTGCAGTAGCATATGGACAT...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTTGTTCCAGCAGCATTTaGACACATTCCTCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALICSSSI*THSSCP
Trigger: AGGACACGAGGAATGTGTGCAAATGCTGCTGGAACA...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTAATGATCAGCAAATGCTaGCGCATGAAGGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLMISKC*RMKGCP
Trigger: AGGACACCCCTTCATGCGGCAGCATTTGCTGATCAT...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCACTGAGCAGTAGAAGATaGGTAGCCCTCTCTAACCAA +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSLSSRR*VALSNQ
Trigger: TTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAG...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGCACCGCAGCATATTGTaGTTCTTCAACACTGAACCT +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTHRSIL*FFNTEP
Trigger: AGGTTCAGTGTTGAAGAAGCACAATATGCTGCGGTG...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AGGAGCATTTCTTATATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTCTGCTTCTTCACTTCTaGAAGCAACAGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: RSISYMGSKHKAIFANRSLLLHF*KQQPGA
Trigger: TGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAG...AGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCATATAAGAAATGCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp ATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCGTCACTTCTGCGCCATaGTTAATGAGCAATGCTACA +
Preference number: 4 (lower is better)
Translates to: IYCTEESFWQYSHLRQLFVTSAP*LMSNAT
Trigger: TGTAGCATTGCTCATTAACCATGGCGCAGAAGTGAC...GAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCACGTGTGAACCTTCCATaGACAGCTGTCATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSARVNLP*TAVMCS
Trigger: ACTGCACATGACAGCTGTCCATGGAAGGTTCACACG...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACAAAGGGAACATGCTATaGATTCCACACTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHKGNML*IPHLAV
Trigger: CACAGCCAAGTGTGGAATCCATAGCATGTTCCCTTT...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGAAAGGGAACATGCTATaGATTCCACACTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVKGNML*IPHLAV
Trigger: CACAGCCAAGTGTGGAATCCATAGCATGTTCCCTTT...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTTCTTCTGAATTATCATaGGCATTTCCTAAGATAGTC +
Preference number: 4 (lower is better)
Translates to: LIHNWSLRVPVLQPTDVLSSELS*AFPKIV
Trigger: GACTATCTTAGGAAATGCCCATGATAATTCAGAAGA...AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGTTTCCTTCAGCTCCCTaGCTCTTTCAAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTFPSAP*LFQVLL
Trigger: CAGAAGAACTTGAAAGAGCCAGGGAGCTGAAGGAAA...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGGAAGTGGGGTTCTTTTaGTTACATTGTCTTTCACAA +
Preference number: 4 (lower is better)
Translates to: LRSVAGIKCILIHNWSLREVGFF*LHCLSQ
Trigger: TTGTGAAAGACAATGTAACCAAAAGAACCCCACTTC...CCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACCAACAGTGTCTACGTTaGCTTCCTTTTCAAGTAACA +
Preference number: 4 (lower is better)
Translates to: FPVSCSQLENKGCVLPNHQQCLR*LPFQVT
Trigger: TGTTACTTGAAAAGGAAGCCAACGTAGACACTGTTG...GTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAAGGGCGTCCTCCCTCTaGAATCTTTACAGAGAATTG +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSRASSL*NLYREL
Trigger: CAATTCTCTGTAAAGATTCCAGAGGGAGGACGCCCT...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACTCAGAAAGAGCCATTTaGAGCAGCTCGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNSERAI*SSSLSH
Trigger: GTGGCTGAGCGAGCTGCTCCAAATGGCTCTTTCTGA...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCACGATACTGGAATCTATaGCCCCAAGCAGCAATGATG +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSRYWNL*PQAAMM
Trigger: CATCATTGCTGCTTGGGGCCATAGATTCCAGTATCG...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCTGTGAAACCTTCTTATaGACAGGAAAAACTCTTACT +
Preference number: 4 (lower is better)
Translates to: VYTNFHGNAGVRRQKWYCCETFL*TGKTLT
Trigger: AGTAAGAGTTTTTCCTGTCCATAAGAAGGTTTCACA...GCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp AAGAGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCTTTGCGTTCTGTGGCTaGGATAAAGTGCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: KRNFQYLVPSWKIKGACFFAFCG*DKVHSD
Trigger: ATCAGAATGCACTTTATCCCAGCCACAGAACGCAAA...GAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTTTCTCTACTAGCTTCTaGAAGCCCAGGCCCCAAATA +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTFSTSF*KPRPQI
Trigger: TATTTGGGGCCTGGGCTTCCAGAAGCTAGTAGAGAA...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR CAA 72 bp ATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTaGGCAGTATTCCCACTTGAGGCAATTATTCCACCG +
Preference number: 4 (lower is better)
Translates to: INGNYLLHGRIF*AVFPLEAIIPP
Trigger: CGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp GAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTATTTTTCTTCAGTTTTATGGATaGGCATCCGGATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: EESFWQYSHLRQLFHRIFLQFYG*ASGSPL
Trigger: CAGAGGAGATCCGGATGCTCATCCATAAAACTGAAG...AAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACAGAAATGCGGCCACATaGAGAGGGGTTCGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNRNAAT*RGVRFS
Trigger: TGAGAAACGAACCCCTCTTCATGTGGCCGCATTTCT...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGTGCATTGACATCAGCTaGGTGCTTAATCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTCIDIS*VLNQNL
Trigger: CAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCA...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGTGCATTGACATCAGCTaGGTGCTTAATCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: STLTWINGNYLLHGRIFLCIDIS*VLNQNL
Trigger: CAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCA...CAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACTGCATTGACATCAGCTaGGTGCTTAATCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHCIDIS*VLNQNL
Trigger: CAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCA...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATATATTTCCATAGACATTaGTTTCATCAATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: SILVLMCSWLMNYTHTHIYFHRH*FHQSPP
Trigger: GGGTGGAGATTGATGAAATCAATGTCTATGGAAATA...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTTTGCCATCTTTACTCTaGATGTTAACATCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: YLLHGRIFLAVFPLEAIILPSLL*MLTSAP
Trigger: CGGGGCAGATGTTAACATTCAGAGTAAAGATGGCAA...AATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp ATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCTTAATCAAAAGCTCATaGCCGTATCTTGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: IYCTEESFWQYSHLRQLFLIKSS*PYLAAT
Trigger: TGTGGCTGCAAGATACGGTCATGAGCTTTTGATTAA...GAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp GAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATAGTAGCACCAGAATCTaGTTCTTCAAATCCACTGTT +
Preference number: 4 (lower is better)
Translates to: EFPVSCSQLENKGCVLPNSSTRI*FFKSTV
Trigger: AACAGTGGATTTGAAGAATCAGATTCTGGTGCTACT...ATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR TCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGAGTAGCACCAGAATCTaGTTCTTCAAATCCACTGTT +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMSSTRI*FFKSTV
Trigger: AACAGTGGATTTGAAGAATCAGATTCTGGTGCTACT...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAAGCCTTGGTTATCTTTaGAACAACAGTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSSLGYL*NNSPPQ
Trigger: CTGAGGAGGACTGTTGTTTCAAAGATAACCAAGGCT...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGTGTCATCTCTACAACTaGCGATACTGGAATCTATGG +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVCHLYN*RYWNLW
Trigger: CCATAGATTCCAGTATCGTCAGTTGTAGAGATGACA...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAATGTCATCTCTACAACTaGCGATACTGGAATCTATGG +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTECHLYN*RYWNLW
Trigger: CCATAGATTCCAGTATCGTCAGTTGTAGAGATGACA...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCACAGTGCTGTTTTCCCTaGATTATCTACTGCGTTCAC +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSQCCFP*IIYCVH
Trigger: GTGAACGCAGTAGATAATTCAGGGAAAACAGCACTG...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGATCCACTACACATCTaGGTTTTCATCTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTDPLHI*VFISQK
Trigger: CTTCTGCGAGATGAAAACTCAGATGTGTAGTGGATC...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGGTGCTTCTTCAACACTaGACCTCTCTTAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMVLLQH*TSLNFQ
Trigger: CTGAAAATTAAGAGAGGTTCAGTGTTGAAGAAGCAC...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAGAGTCACTGCTTTGCTaGAATGATTCTTGTACTCTC +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEESLLC*NDSCTL
Trigger: GAGAGTACAAGAATCATTTCAGCAAAGCAGTGACTC...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATACCATTTTTACAGTCATaGCATTTACCAGAGTCATTC +
Preference number: 4 (lower is better)
Translates to: SILVLMCSWLMNYTHTHIPFLQS*HLPESF
Trigger: GAATGACTCTGGTAAATGTCATGACTGTAAAAATGG...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp GAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTATTTTTGGCAGTATTCCCACTTaGGGCAATTATTCCACCGTA +
Preference number: 4 (lower is better)
Translates to: EESFWQYSHLRQLFHRIFGSIPT*GNYSTV
Trigger: TACGGTGGAATAATTGCCTCAAGTGGGAATACTGCC...AAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACATCACCGCTGAAGATTaGCTGAACCAATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNITAED*LNQWWL
Trigger: CAGCCACCATTGGTTCAGGCAATCTTCAGCGGTGAT...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp GCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTGCTTCTTCACTTCTGAATCAAAACCTGTACTaGTTCTTCACTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ALTSAECLIKTCTASSLLNQNLY*FFTSGS
Trigger: GCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGATT...CAGAAGTGAAGAAGCAGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR GCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTGAGGCAGCAGCAAAATaGAAAGGGGTGAACCCATTA +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITEAAAK*KGVNPL
Trigger: TAATGGGTTCACCCCTTTGCATTTTGCTGCTGCCTC...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTTGGACAGCTGTCATGTaGAGTGGACTTTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITWTAVM*SGLLPS
Trigger: AGATGGCAAAAGTCCACTGCACATGACAGCTGTCCA...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AGGAGCATTTCTTATATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTCTCATGACCGTATCTTaGAGCCACATGGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RSISYMGSKHKAIFANRSLMTVS*SHMERS
Trigger: ACTCCTCTCCATGTGGCTGCAAGATACGGTCATGAG...AGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCATATAAGAAATGCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp AAAAAGGCTTTACTTGGGGCGTTACCAATGATAGGAACACAATTTAACAATGAATTCCACATTACCTCCTaGAGCAGCAGCATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KKALLGALPMIGTQFNNEFHITS*SSSMKA
Trigger: TGCCTTCATGCTGCTGCTGCAGGAGGTAATGTGGAA...TTCATTGTTAAATTGTGTTCCTATCATTGGTAACGCCCCAAGTAAAGCCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACGTCAATATGTCCATATaGTACTGCAAGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHVNMSI*YCKHQW
Trigger: CCACTGATGCTTGCAGTAGCATATGGACATATTGAC...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTCTCTGTGTAAAGCTGTaGATCCTAGGATGTCAACAG +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSLCVKL*ILGCQQ
Trigger: CTGTTGACATCCTAGGATGCACAGCTTTACACAGAG...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTCTGAGCAGTAGAAGATaGGTAGCCCTCTCTAACCAA +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITLSSRR*VALSNQ
Trigger: TTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAG...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTCACCGCAGCATATTGTaGTTCTTCAACACTGAACCT +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTHRSIL*FFNTEP
Trigger: AGGTTCAGTGTTGAAGAAGCACAATATGCTGCGGTG...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATACCAAGCAGTGTTTACTaGCTAAAGTACCAAAACATA +
Preference number: 4 (lower is better)
Translates to: SILVLMCSWLMNYTHTHIPSSVY*LKYQNI
Trigger: TATGTTTTGGTACTTTAGGCAGTAAACACTGCTTGG...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTATTCATAGCGAACAGCTaGCTCTCTGCTGCATTATCC +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLFIANS*LSAALS
Trigger: GGATAATGCAGCAGAGAGGCAGCTGTTCGCTATGAA...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR CCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGACTCTAGACATAGTGTaGCTTCCTTTTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTTLDIV*LPFPSA
Trigger: AGCTGAAGGAAAAGGAAGCCACACTATGTCTAGAGT...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTAGTGGTGTTTGTCCTTTaGCATCTTTCACATCGACCG +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLVVFVL*HLSHRP
Trigger: CGGTCGATGTGAAAGATGCCAAAGGACAAACACCAC...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTTACTGCAAGCATCAGTaGTGTTTGTCCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSYCKHQ*CLSFGI
Trigger: GATGCCAAAGGACAAACACCACTGATGCTTGCAGTA...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACTATTGCACAGTGCAGTaGAGTAAAGGGATTACCGAT +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHYCTVQ*SKGITD
Trigger: ATCGGTAATCCCTTTACTCCACTGCACTGTGCAATA...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGACGGAAGAATCTTTTTaGCAGTATTCCCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: STLTWINGNYLLHGRIFLTEESF*QYSHLR
Trigger: CCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGT...CAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp ATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCTTAACCTGGATAAATaGGAACTATCTACTGCACGG +
Preference number: 4 (lower is better)
Translates to: IYCTEESFWQYSHLRQLFLNLDK*ELSTAR
Trigger: CCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAG...GAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp TGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTAGATCCACCTTAACCTaGATAAATGGGAACTATCTA +
Preference number: 4 (lower is better)
Translates to: CTEESFWQYSHLRQLFHRRSTLT*INGNYL
Trigger: TAGATAGTTCCCATTTATCCAGGTTAAGGTGGATCT...ACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp ATCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTCAAAATGCAAAGGGGTaGACCCATTATTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: IHLNLDKWELSTARKNLFQNAKG*THYCLA
Trigger: AGCCAAACAATAATGGGTTCACCCCTTTGCATTTTG...AAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCAAAATGCAAAGGGGTaGACCCATTATTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALIQNAKG*THYCLA
Trigger: AGCCAAACAATAATGGGTTCACCCCTTTGCATTTTG...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTTTAATCAAAAGCTCATaGCCGTATCTTGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTLIKSS*PYLAAT
Trigger: TGTGGCTGCAAGATACGGTCATGAGCTTTTGATTAA...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTTTAATCAAAAGCTCATaGCCGTATCTTGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALILIKSS*PYLAAT
Trigger: TGTGGCTGCAAGATACGGTCATGAGCTTTTGATTAA...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTATTTCTATCCATGTCTaGTGCAGCGGCGTAATGCAA +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITISIHV*CSGVMQ
Trigger: TTGCATTACGCCGCTGCATCAGACATGGATAGAAAT...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGTAAACACAGTGTGTaGCCATTAATTACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALIRKHSV*PLITEA
Trigger: TGCCTCAGTAATTAATGGTCACACACTGTGTTTACG...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCACGTAAACACAGTGTGTaGCCATTAATTACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSRKHSV*PLITEA
Trigger: TGCCTCAGTAATTAATGGTCACACACTGTGTTTACG...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGCCTTGGTTATCTTTaGAACAACAGTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITSLGYL*NNSPPQ
Trigger: CTGAGGAGGACTGTTGTTTCAAAGATAACCAAGGCT...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACTCTTCCATTTTAGACTaGAGCATTTTGGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHSSILD*SILVLM
Trigger: CATGAGGACCAAAATGCTTCAGTCTAAAATGGAAGA...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGTTCTCATCAGGTTACTaGGACTATGTGAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVFSSGY*DYVSFS
Trigger: TGAAAAGCTCACATAGTCTCAGTAACCTGATGAGAA...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAGAGTCACTGCTTTGCTaGAATGATTCTTGTACTCTC +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSESLLC*NDSCTL
Trigger: GAGAGTACAAGAATCATTTCAGCAAAGCAGTGACTC...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp AAGAGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCGATGTTCTTGGATCTTaGATGGTTAACAGCCATTTT +
Preference number: 4 (lower is better)
Translates to: KRNFQYLVPSWKIKGACFDVLGS*MVNSHF
Trigger: AAAATGGCTGTTAACCATTCAAGATCCAAGAACATC...GAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGAATCAAAACCTGTACTaGTTCTTCACTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTNQNLY*FFTSGS
Trigger: GCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGATT...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAAATCAAAACCTGTACTaGTTCTTCACTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTENQNLY*FFTSGS
Trigger: GCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGATT...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGTGTTGACATCAGCTGAGTaGTTAATCAAAACCTGTACT +
Preference number: 4 (lower is better)
Translates to: HKAIFANRSIPTSMAMLVLTSAE*LIKTCT
Trigger: AGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAA...CACCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp CAGTTCTTGTCCCTTGCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTTTGACATCAGCTGAGTaGTTAATCAAAACCTGTACT +
Preference number: 4 (lower is better)
Translates to: QFLSLALTSAECLIKTCTLTSAE*LIKTCT
Trigger: AGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAA...AGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR GCA 90 bp ATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGCTTACAGGTCACTTCTaGGCCATGGTTAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: MGSKHKAIFANRSIPTSMLTGHF*AMVNEQ
Trigger: TTGCTCATTAACCATGGCGCAGAAGTGACCTGTAAG...CATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp TATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCCAGGTTCAGGAGATaGTTGACAACATTAATCTGT +
Preference number: 4 (lower is better)
Translates to: YLLHGRIFLAVFPLEAIIPRFRR*LTTLIC
Trigger: ACAGATTAATGTTGTCAAGCATCTCCTGAACCTGGG...AATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGAATGTAAAGGGAACATaGTATGGATTCCACACTTGG +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTNVKGT*YGFHTW
Trigger: CCAAGTGTGGAATCCATAGCATGTTCCCTTTACATT...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAATGATAACAACTTTCTaGAGCAGTCAGAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEMITTF*SSQSEH
Trigger: ATGCTCACTCTGACTGCTGCAGAAAGTTGTTATCAT...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTATCTGCTCCGCTGCTCTaGAAGAGTTTTATACATTCC +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLSAPLL*KSFIHS
Trigger: GGAATGTATAAAACTCTTGCAGAGCAGCGGAGCAGA...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGCCGGATAGATGGATTTaGATCATTTTGAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: CNPLRSVAGIKCILIHNWPDRWI*IILKQK
Trigger: TTTCTGCTTCAAAATGATGCAAATCCATCTATCCGG...CCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTATGTCCATATGCTACTaGAAGCATCAGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALIMSICY*KHQWCL
Trigger: CAAACACCACTGATGCTTGCAGTAGCATATGGACAT...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTGTCAATATGTCCATATaGTACTGCAAGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSVNMSI*YCKHQW
Trigger: CCACTGATGCTTGCAGTAGCATATGGACATATTGAC...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCACTCTGTGTAAAGCTGTaGATCCTAGGATGTCAACAG +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSALCVKL*ILGCQQ
Trigger: CTGTTGACATCCTAGGATGCACAGCTTTACACAGAG...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACTGTTCCAGCAGCATTTaGACACATTCCTCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNCSSSI*THSSCP
Trigger: AGGACACGAGGAATGTGTGCAAATGCTGCTGGAACA...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTTGATTATTGCACAGTaGAGTGGAGTAAAGGGATTA +
Preference number: 4 (lower is better)
Translates to: CNPLRSVAGIKCILIHNWLIIAQ*SGVKGL
Trigger: TAATCCCTTTACTCCACTGCACTGTGCAATAATCAA...CCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR GCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACCATGTGCCCACACACTaGCATCATTTCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNHVPTH*HHFSSG
Trigger: ACCTGATGAGAAATGATGGCAGTGTGTGGGCACATG...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGAACGTCAGAGAGTACTaGTCTAATTCGACACATTTC +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTNVREY*SNSTHF
Trigger: GAAATGTGTCGAATTAGAGCAGTACTCTCTGACGTT...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGATTTCCTGCTTGAAATaGCAACTGAGCAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTISCLK*QLSKIS
Trigger: GGAAATCTTGCTCAGTTGGCATTTCAAGCAGGAAAT...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGCTCATGGTGAGTCACTaGTTTGCTGAAATGATTCTT +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVLMVSH*FAEMIL
Trigger: AAGAATCATTTCAGCAAAGCAGTGACTCACCATGAG...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ATCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTATTCCACCGTATTTTTaGGGTAACCTACTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: IHLNLDKWELSTARKNLFIPPYF*GNLLGC
Trigger: ACAGCCAAGTAGGTTACCGCAAAAATACGGTGGAAT...AAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAGTCACTTCTGCGCCATaGTTAATGAGCAATGCTACA +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSAVTSAP*LMSNAT
Trigger: TGTAGCATTGCTCATTAACCATGGCGCAGAAGTGAC...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp GAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTATTTTTGAACCCATTATTGTTTaGCTGGTTCACGTTAGCACC +
Preference number: 4 (lower is better)
Translates to: EESFWQYSHLRQLFHRIFEPIIV*LVHVST
Trigger: GGTGCTAACGTGAACCAGCCAAACAATAATGGGTTC...AAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAACAACAGTGTCTACGTTaGCTTCCTTTTCAAGTAACA +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEQQCLR*LPFQVT
Trigger: TGTTACTTGAAAAGGAAGCCAACGTAGACACTGTTG...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACAGGGCGTCCTCCCTCTaGAATCTTTACAGAGAATTG +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNRASSL*NLYREL
Trigger: CAATTCTCTGTAAAGATTCCAGAGGGAGGACGCCCT...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAACAAAACAAAACTaGGGCCATCTGTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTETKQN*GHLCDC
Trigger: ACAGTCACACAGATGGCCCCAGTTTTGTTTTGTTTC...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR TCA 90 bp ATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCTATTTCCATAGACATTaGTTTCATCAATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: IYCTEESFWQYSHLRQLFYFHRH*FHQSPP
Trigger: GGGTGGAGATTGATGAAATCAATGTCTATGGAAATA...GAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR TCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTACAAAATGCAAAGGGGTaGACCCATTATTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLQNAKG*THYCLA
Trigger: AGCCAAACAATAATGGGTTCACCCCTTTGCATTTTG...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp AAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACAAAATGCAAAGGGGTaGACCCATTATTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: KYILEGRLIICSDSRKPSQNAKG*THYCLA
Trigger: AGCCAAACAATAATGGGTTCACCCCTTTGCATTTTG...TGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAATCTTTCAAGTTCTTCTaGATTATCATGGGCATTTCC +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTESFKFF*IIMGIS
Trigger: GGAAATGCCCATGATAATTCAGAAGAACTTGAAAGA...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACGGATTTGCATCATTTTaGAGCAGAAACTCTAGACAT +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHGFASF*SRNSRH
Trigger: ATGTCTAGAGTTTCTGCTTCAAAATGATGCAAATCC...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTAGTAGCACCAGAATCTaGTTCTTCAAATCCACTGTT +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALISSTRI*FFKSTV
Trigger: AACAGTGGATTTGAAGAATCAGATTCTGGTGCTACT...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAGATGCACAATTCCCATaGTCATTGATTATTGCACAG +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSDAQFP*SLIIAQ
Trigger: CTGTGCAATAATCAATGATCATGGGAATTGTGCATC...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTGATGCACAATTCCCATaGTCATTGATTATTGCACAG +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALIDAQFP*SLIIAQ
Trigger: CTGTGCAATAATCAATGATCATGGGAATTGTGCATC...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGAGAGAGAGATCAGTTaGTGTAATGAACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVEREIS*CNEQFI
Trigger: AATGAACTGTTCATTACATCAACTGATCTCTCTCTC...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ATCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTAATCAAAACCTGTACTaGTTCTTCACTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: IHLNLDKWELSTARKNLFNQNLY*FFTSGS
Trigger: GCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGATT...AAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp TCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGTTGACATCAGCTGAGTaGTTAATCAAAACCTGTACT +
Preference number: 4 (lower is better)
Translates to: STLTWINGNYLLHGRIFLLTSAE*LIKTCT
Trigger: AGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAA...CAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACTTGACATCAGCTGAGTaGTTAATCAAAACCTGTACT +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHLTSAE*LIKTCT
Trigger: AGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAA...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTACCCAGGTTCAGGAGATaGTTGACAACATTAATCTGT +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLPRFRR*LTTLIC
Trigger: ACAGATTAATGTTGTCAAGCATCTCCTGAACCTGGG...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTATGATAACAACTTTCTaGAGCAGTCAGAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSMITTF*SSQSEH
Trigger: ATGCTCACTCTGACTGCTGCAGAAAGTTGTTATCAT...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACTTTCACAAAGATGGATaGGCCCTGATTGATAAGCGC +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNFHKDG*ALIDKR
Trigger: GCGCTTATCAATCAGGGCGCATCCATCTTTGTGAAA...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTGATTCTTGTACTCTCTaGTACACGACAGGAAAAATG +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSDSCTL*YTTGKM
Trigger: CATTTTTCCTGTCGTGTAGCAGAGAGTACAAGAATC...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTCTCATGGTGAGTCACTaGTTTGCTGAAATGATTCTT +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTLMVSH*FAEMIL
Trigger: AAGAATCATTTCAGCAAAGCAGTGACTCACCATGAG...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACCCAAGCAGTGTTTACTaGCTAAAGTACCAAAACATA +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHPSSVY*LKYQNI
Trigger: TATGTTTTGGTACTTTAGGCAGTAAACACTGCTTGG...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TGTCTTAAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGGTCACTTCTGCGCCATaGTTAATGAGCAATGCTACA +
Preference number: 4 (lower is better)
Translates to: CLKYILEGRLIICSDSRKVTSAP*LMSNAT
Trigger: TGTAGCATTGCTCATTAACCATGGCGCAGAAGTGAC...CTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTTAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACGAACCCATTATTGTTTaGCTGGTTCACGTTAGCACC +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNEPIIV*LVHVST
Trigger: GGTGCTAACGTGAACCAGCCAAACAATAATGGGTTC...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AGGAGCATTTCTTATATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTGAACCCATTATTGTTTaGCTGGTTCACGTTAGCACC +
Preference number: 4 (lower is better)
Translates to: RSISYMGSKHKAIFANRSEPIIV*LVHVST
Trigger: GGTGCTAACGTGAACCAGCCAAACAATAATGGGTTC...AGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCATATAAGAAATGCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp AGGAGCATTTCTTATATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTAAAGGGAACATGCTATaGATTCCACACTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSISYMGSKHKAIFANRSKGNML*IPHLAV
Trigger: CACAGCCAAGTGTGGAATCCATAGCATGTTCCCTTT...AGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCATATAAGAAATGCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACTCTTCCAAATTTATCTaGGGTGTCTATTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHSSKFI*GVYFKA
Trigger: GGCTTTGAAATAGACACCCCAGATAAATTTGGAAGA...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AGGAGCATTTCTTATATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTTTTCCTTCAGCTCCCTaGCTCTTTCAAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RSISYMGSKHKAIFANRSFPSAP*LFQVLL
Trigger: CAGAAGAACTTGAAAGAGCCAGGGAGCTGAAGGAAA...AGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCATATAAGAAATGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTCTTGTCCCGGATAGATaGATTTGCATCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSLVPDR*ICIILK
Trigger: CTTCAAAATGATGCAAATCCATCTATCCGGGACAAG...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAGAAGTGGGGTTCTTTTaGTTACATTGTCTTTCACAA +
Preference number: 4 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEEVGFF*LHCLSQ
Trigger: TTGTGAAAGACAATGTAACCAAAAGAACCCCACTTC...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AAAAAGGCTTTACTTGGGGCGTTACCAATGATAGGAACACAATTTAACAATGAATACTGCAAGCATCAGTaGTGTTTGTCCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: KKALLGALPMIGTQFNNEYCKHQ*CLSFGI
Trigger: GATGCCAAAGGACAAACACCACTGATGCTTGCAGTA...TTCATTGTTAAATTGTGTTCCTATCATTGGTAACGCCCCAAGTAAAGCCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGTACCAAAACATACTATaGTGCCCTTTTAGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: WEKEKERKRERERSVDVMYQNIL*CPFSSD
Trigger: ATCACTACTAAAAGGGCACCATAGTATGTTTTGGTA...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGGATTTGCATCATTTTaGAGCAGAAACTCTAGACAT +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTGFASF*SRNSRH
Trigger: ATGTCTAGAGTTTCTGCTTCAAAATGATGCAAATCC...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAAAGGCACATTTTTCATaGCCTTTACTACAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSKAHFS*PLLQAK
Trigger: TTTGGCTTGTAGTAAAGGTCATGAAAAATGTGCCTT...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTAAGGCACATTTTTCATaGCCTTTACTACAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTKAHFS*PLLQAK
Trigger: TTTGGCTTGTAGTAAAGGTCATGAAAAATGTGCCTT...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAGTGCTTCTTCAACACTaGACCTCTCTTAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSAVLLQH*TSLNFQ
Trigger: CTGAAAATTAAGAGAGGTTCAGTGTTGAAGAAGCAC...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTATTAAACAAACGAAGTTaGCAGCCATCATTGTACTGG +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLLNKRS*QPSLYW
Trigger: CCAGTACAATGATGGCTGTCAACTTCGTTTGTTTAA...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR TCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTATACAGGCATTATTTCTaGAGATGGACACCTTTACCT +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLYRHYF*RWTPLP
Trigger: AGGTAAAGGTGTCCATCTTCAGAAATAATGCCTGTA...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR TCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACAGTCACACTTTTCACTaGCTTGGTATGACCTTGACT +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNSHTFH*LGMTLT
Trigger: AGTCAAGGTCATACCAAGTCAGTGAAAAGTGTGACT...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTCCGGATAGATGGATTTaGATCATTTTGAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTPDRWI*IILKQK
Trigger: TTTCTGCTTCAAAATGATGCAAATCCATCTATCCGG...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTTTGATTATTGCACAGTaGAGTGGAGTAAAGGGATTA +
Preference number: 4 (lower is better)
Translates to: FQGGNGTHYKTSESTALILIIAQ*SGVKGL
Trigger: TAATCCCTTTACTCCACTGCACTGTGCAATAATCAA...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTATTTCCTGCTTGAAATaGCAACTGAGCAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITISCLK*QLSKIS
Trigger: GGAAATCTTGCTCAGTTGGCATTTCAAGCAGGAAAT...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTAGATTCTTGTACTCTCTaGTACACGACAGGAAAAATG +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLDSCTL*YTTGKM
Trigger: CATTTTTCCTGTCGTGTAGCAGAGAGTACAAGAATC...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACTCACTGGTATCATATTaGTCTGATAACACTCAAATG +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHSLVSY*SDNTQM
Trigger: CATTTGAGTGTTATCAGAGCAATATGATACCAGTGA...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACAGAGCATTCAGTAGTTaGAAAAGTATTAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: GGNGTHYKTSESTALIRHRAFSS*KSIKLC
Trigger: GCACAGTTTAATACTTTTGCAACTACTGAATGCTCT...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp GAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTATTTTTATGGGAACTATCTACTaGACGGAAGAATCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: EESFWQYSHLRQLFHRIFMGTIY*TEESFW
Trigger: CCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCAT...AAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR GCA 90 bp AAAAAGGCTTTACTTGGGGCGTTACCAATGATAGGAACACAATTTAACAATGAATTGGAAAATAAAGGGTaGGTGCTTCCCAATCACAGA +
Preference number: 4 (lower is better)
Translates to: KKALLGALPMIGTQFNNELENKG*VLPNHR
Trigger: TCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAA...TTCATTGTTAAATTGTGTTCCTATCATTGGTAACGCCCCAAGTAAAGCCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CCA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAGTGGGGTTCTTTTaGTTACATTGTCTTTCACAA +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTEVGFF*LHCLSQ
Trigger: TTGTGAAAGACAATGTAACCAAAAGAACCCCACTTC...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TGTCTTAAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGGTTAGGAGGCAGAAATaGTACTGCCTTATATCGATG +
Preference number: 4 (lower is better)
Translates to: CLKYILEGRLIICSDSRKVRRQK*YCLISM
Trigger: CATCGATATAAGGCAGTACCATTTCTGCCTCCTAAC...CTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTTAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTATCATCATCAAGCAACTaGCAATCGGTTTTACATGCT +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLSSSSN*QSVLHA
Trigger: AGCATGTAAAACCGATTGCCAGTTGCTTGATGATGA...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
3UTR CAA 72 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATaGTGCTTCTTCAACACTGAACCTCTCTTAATTTTC +
Preference number: 4 (lower is better)
Translates to: FPFTSRKRHRSI*CFFNTEPLLIF
Trigger: GAAAATTAAGAGAGGTTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
3UTR CAA 72 bp GCATTTCTTATATGGGATCTAAACACAAAGCCATATTaGCTAATAGGTCTATACCAACTTCCATGGCAATGC +
Preference number: 4 (lower is better)
Translates to: AFLIWDLNTKPY*LIGLYQLPWQC
Trigger: GCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCATATAAGAAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp AAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCATATTTCCATAGACATTaGTTTCATCAATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: KYILEGRLIICSDSRKPSYFHRH*FHQSPP
Trigger: GGGTGGAGATTGATGAAATCAATGTCTATGGAAATA...TGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR TCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTTATTTCCATAGACATTaGTTTCATCAATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITYFHRH*FHQSPP
Trigger: GGGTGGAGATTGATGAAATCAATGTCTATGGAAATA...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAGAGAGAGAGATCAGTTaGTGTAATGAACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSAEREIS*CNEQFI
Trigger: AATGAACTGTTCATTACATCAACTGATCTCTCTCTC...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACTGGTATGACCTTGACTaGGAAGCTCATTTTACTACT +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNWYDLD*EAHFTT
Trigger: AGTAGTAAAATGAGCTTCTCAGTCAAGGTCATACCA...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp AGGAGCATTTCTTATATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTAATGTAAAGGGAACATaGTATGGATTCCACACTTGG +
Preference number: 4 (lower is better)
Translates to: RSISYMGSKHKAIFANRSNVKGT*YGFHTW
Trigger: CCAAGTGTGGAATCCATAGCATGTTCCCTTTACATT...AGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCATATAAGAAATGCTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp AGGAGCATTTCTTATATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTATGATAACAACTTTCTaGAGCAGTCAGAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: RSISYMGSKHKAIFANRSMITTF*SSQSEH
Trigger: ATGCTCACTCTGACTGCTGCAGAAAGTTGTTATCAT...AGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCATATAAGAAATGCTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR GCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACCGGCAGCATAATGTATaGTATTGTAACCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNRQHNV*YCNLPC
Trigger: ACAAGGAAGGTTACAATAGCATACATTATGCTGCCG...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTTTGATTATTGCACAGTaGAGTGGAGTAAAGGGATTA +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITLIIAQ*SGVKGL
Trigger: TAATCCCTTTACTCCACTGCACTGTGCAATAATCAA...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTATGATCATTGATTATTaGACAGTGCAGTGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSMIIDY*TVQWSK
Trigger: TTTACTCCACTGCACTGTGCAATAATCAATGATCAT...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACAACGTCAGAGAGTACTaGTCTAATTCGACACATTTC +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNNVREY*SNSTHF
Trigger: GAAATGTGTCGAATTAGAGCAGTACTCTCTGACGTT...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTTCACTGGTATCATATTaGTCTGATAACACTCAAATG +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSSLVSY*SDNTQM
Trigger: CATTTGAGTGTTATCAGAGCAATATGATACCAGTGA...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTATCTTCCAAATTTATCTaGGGTGTCTATTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLSSKFI*GVYFKA
Trigger: GGCTTTGAAATAGACACCCCAGATAAATTTGGAAGA...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCATCTTCCAAATTTATCTaGGGTGTCTATTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: KYILEGRLIICSDSRKPSSSKFI*GVYFKA
Trigger: GGCTTTGAAATAGACACCCCAGATAAATTTGGAAGA...TGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTTCTTCTGAATTATCATaGGCATTTCCTAAGATAGTC +
Preference number: 4 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSSSELS*AFPKIV
Trigger: GACTATCTTAGGAAATGCCCATGATAATTCAGAAGA...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACAAGACAGGCAGACACTaGCAAATAAGTAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNKTGRH*QISKCN
Trigger: ATTGCACTTACTTATTTGCCAGTGTCTGCCTGTCTT...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCATACCAAAACATACTATaGTGCCCTTTTAGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSYQNIL*CPFSSD
Trigger: ATCACTACTAAAAGGGCACCATAGTATGTTTTGGTA...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACCCATTTTTACAGTCATaGCATTTACCAGAGTCATTC +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNPFLQS*HLPESF
Trigger: GAATGACTCTGGTAAATGTCATGACTGTAAAAATGG...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR TCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACACACTGATATACTTCTaGGAACTCACTGCTAAATAC +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNTLIYF*ELTAKY
Trigger: GTATTTAGCAGTGAGTTCTCAGAAGTATATCAGTGT...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR GCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACTTGACATCAGCTGAGTaGTTAATCAAAACCTGTACT +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNLTSAE*LIKTCT
Trigger: AGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAA...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTATGATCATTGATTATTaGACAGTGCAGTGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITMIIDY*TVQWSK
Trigger: TTTACTCCACTGCACTGTGCAATAATCAATGATCAT...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAGATATTTCTTTGTGCTaGCTTTGTGTATATGATCCA +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSADISLC*LCVYDP
Trigger: TGGATCATATACACAAAGGCAGCACAAAGAAATATC...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTATAAGCACACCAAGTTaGTCAACAGTACAAAGAATA +
Preference number: 4 (lower is better)
Translates to: QPTQHISTPSCSTVQRITISTPS*STVQRI
Trigger: TATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTAT...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR GCA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAAGAGCATTCAGTAGTTaGAAAAGTATTAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: TQHISTPSCSTVQRITSARAFSS*KSIKLC
Trigger: GCACAGTTTAATACTTTTGCAACTACTGAATGCTCT...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CCA 90 bp AAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCATCTTCTGAATTATCATaGGCATTTCCTAAGATAGTC +
Preference number: 4 (lower is better)
Translates to: KYILEGRLIICSDSRKPSSSELS*AFPKIV
Trigger: GACTATCTTAGGAAATGCCCATGATAATTCAGAAGA...TGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp AGGAGCATTTCTTATATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTGGAGCATTTCTTATATaGGATCTAAACACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RSISYMGSKHKAIFANRSGAFLI*DLNTKP
Trigger: TGGCTTTGTGTTTAGATCCCATATAAGAAATGCTCC...AGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCATATAAGAAATGCTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CCA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACTCTTCTGAATTATCATaGGCATTTCCTAAGATAGTC +
Preference number: 4 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNSSELS*AFPKIV
Trigger: GACTATCTTAGGAAATGCCCATGATAATTCAGAAGA...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS GCA 90 bp GAGTTTGAGCACTGCCATTCTTCCGCTCCTTCGCGCGCACACACATaGAGGTCCCCGGCCCGCAGATGTCACGCCGGGAGCCGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: EFEHCHSSAPSRAHT*RSPARRCHAGSRGS
Trigger: GCTTCCCCGGCTCCCGGCGTGACATCTGCGGGCCGGGGACCTGCATGTGTGTGCGCGCGAAGGAGCGGAAGAATGGCAGTGCTCAAACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282272.15
ENST00000409153.5
ENST00000409919.5
ENST00000447713.1
ENST00000463879.1
CDS TCA 90 bp CCAGCTGCTTCAGGCCTCTTTTGGTCTCTTACTGGCGCTCCTCCCTaGGACCTCTCCCCCTCAGCCCATTCACATGCTGCCACCACAAAG +
Preference number: 5 (lower is better)
Translates to: PAASGLFWSLTGAPP*DLSPSAHSHAATTK
Trigger: CTTTGTGGTGGCAGCATGTGAATGGGCTGAGGGGGAGAGGTCTCAGGGAGGAGCGCCAGTAAGAGACCAAAAGAGGCCTGAAGCAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS-3UTR CAA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTCAGTCAGCCACGTCTTaGTTAGGAGCGCAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSIQSATS*LGAQAR
Trigger: CCTGGCTTGCGCTCCTAACAAAGACGTGGCTGACTG...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS GCA 90 bp CATTTGGAGCAGCTCGCTCAGCCACGTGGCGTGGCCACGAGCAGCTaGATAGTGCAAGGGCGTCCTCCCTCTGGAATCTTTACAGAGAAT +
Preference number: 5 (lower is better)
Translates to: HLEQLAQPRGVATSS*IVQGRPPSGIFTEN
Trigger: ATTCTCTGTAAAGATTCCAGAGGGAGGACGCCCTTGCACTATGCAGCTGCTCGTGGCCACGCCACGTGGCTGAGCGAGCTGCTCCAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CCA 90 bp TTATGCCCTCATCCCAGCTGCTTCAGGCCTCTTTTGGTCTCTTACTaGCGCTCCTCCCTGAGACCTCTCCCCCTCAGCCCATTCACATGC +
Preference number: 5 (lower is better)
Translates to: LCPHPSCFRPLLVSY*RSSLRPLPLSPFTC
Trigger: GCATGTGAATGGGCTGAGGGGGAGAGGTCTCAGGGAGGAGCGCCAGTAAGAGACCAAAAGAGGCCTGAAGCAGCTGGGATGAGGGCATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS-3UTR CAA 90 bp TCACTTCTGGAAGCAACAGCCCGGTGCAGTGGAGTCAGCCACATGTTGTCCTTGCCTCGGTCGGAGACATaGACACTGCTCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SLLEATARCSGVSHMLSLPRSET*TLLSRG
Trigger: TCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAGG...CAAGGACAACATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CAA 90 bp TGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTACCACCTTTAAGCCATaGCGCGCAGCGACGTGGAGG +
Preference number: 5 (lower is better)
Translates to: CVLPNHRQARRIRLLPFPTTFKP*RAATWR
Trigger: CCTCCACGTCGCTGCGCGCAATGGCTTAAAGGTGGT...AGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp TTCTTCACTTCTGGAAGCAACAGCCCGGTGCAGTGGAGTCAGCCACATGTTGTCATCTGGCTCCCGAATTaGACAGCCCTCCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: FFTSGSNSPVQWSQPHVVIWLPN*TALPLL
Trigger: GAGCAGGGGGAGGGCTGTCAAATTCGGGAGCCAGAT...GACAACATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CAA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCCTATGGATTCCACACTaGGCTGTGTCAGCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTLWIPH*AVSAPL
Trigger: CAGCGGAGCTGACACAGCCAAGTGTGGAATCCATAG...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS CCA 90 bp CCTTGGTTATCTTTGAAACAACAGTCCTCCTCAGAAAGAGCCATTTaGAGCAGCTCGCTCAGCCACGTGGCGTGGCCACGAGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PWLSLKQQSSSERAI*SSSLSHVAWPRAAA
Trigger: TGCAGCTGCTCGTGGCCACGCCACGTGGCTGAGCGAGCTGCTCCAAATGGCTCTTTCTGAGGAGGACTGTTGTTTCAAAGATAACCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS-3UTR CAA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACATCTGGCTCCCGAATTaGACAGCCCTCCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: RRRASRLQCLLSSKLATDIWLPN*TALPLL
Trigger: GAGCAGGGGGAGGGCTGTCAAATTCGGGAGCCAGAT...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282272.15
CDS-3UTR CAA 90 bp TGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTAGTACACAGGCCCCTTaGGCCAGCAACTCCTCAACT +
Preference number: 5 (lower is better)
Translates to: CVLPNHRQARRIRLLPFPSTQAP*ASNSST
Trigger: AGTTGAGGAGTTGCTGGCCAAAGGGGCCTGTGTACT...AGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACGGGGTTTCACCATGTaGGCCAGGCGGGTCATGAAC +
Preference number: 5 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPRGFTM*ARRVMN
Trigger: GTTCATGACCCGCCTGGCCAACATGGTGAAACCCCG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS TCA 90 bp GCAAGGTTTGAACCTCTTGTATCCCTGGATAATGGGCATCTCCTCTaGCCAGGCTTCAAGGCTGACATTCACCAGGGTTCCCTGCCACCC +
Preference number: 5 (lower is better)
Translates to: ARFEPLVSLDNGHLL*PGFKADIHQGSLPP
Trigger: GGGTGGCAGGGAACCCTGGTGAATGTCAGCCTTGAAGCCTGGTCAGAGGAGATGCCCATTATCCAGGGATACAAGAGGTTCAAACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCTCGGTCGGAGACATaGACACTGCTCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSPRSET*TLLSRG
Trigger: TCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAGG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTCAGCGGCGTGTAGCCTaGGTTATCTTTGAAACAACA +
Preference number: 5 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSIQRRVA*VIFETT
Trigger: TGTTGTTTCAAAGATAACCAAGGCTACACGCCGCTG...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS-3UTR CAA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACTTGGCCCTTGGGCTTTaGGCTAGCCCAGGGTCAAGT +
Preference number: 5 (lower is better)
Translates to: RRRASRLQCLLSSKLATDLALGL*ASPGSS
Trigger: ACTTGACCCTGGGCTAGCCAAAAGCCCAAGGGCCAA...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AACCTGTACTGCTTCTTCACTTCTGGAAGCAACAGCCCGGTGCAGTGGAGTCAGGGGGTCTGCCAGTTCTaGTCCCTTGCATTGACATCA +
Preference number: 5 (lower is better)
Translates to: NLYCFFTSGSNSPVQWSQGVCQF*SLALTS
Trigger: TGATGTCAATGCAAGGGACAAGAACTGGCAGACCCC...CTGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAGTACAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CAA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCACATTAATCTGTCCATaGGAGGCTGCAGCATGCAGA +
Preference number: 5 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTTLICP*EAAACR
Trigger: TCTGCATGCTGCAGCCTCCAATGGACAGATTAATGT...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACCTCAGAAAGAGCCATTaGGAGCAGCTCGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: RRRASRLQCLLSSKLATDLRKSH*EQLAQP
Trigger: TGGCTGAGCGAGCTGCTCCAAATGGCTCTTTCTGAG...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCACTCAGAAAGAGCCATTaGGAGCAGCTCGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPLRKSH*EQLAQP
Trigger: TGGCTGAGCGAGCTGCTCCAAATGGCTCTTTCTGAG...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCCAGCGGCGTGTAGCCTaGGTTATCTTTGAAACAACA +
Preference number: 5 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTQRRVA*VIFETT
Trigger: TGTTGTTTCAAAGATAACCAAGGCTACACGCCGCTG...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACAGTACACAGGCCCCTTaGGCCAGCAACTCCTCAACT +
Preference number: 5 (lower is better)
Translates to: RRRASRLQCLLSSKLATDSTQAP*ASNSST
Trigger: AGTTGAGGAGTTGCTGGCCAAAGGGGCCTGTGTACT...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS GCA 90 bp ATGAGCTCTCAAATCATGGACTCAGCTTTATGCCCTCATCCCAGCTaGTTCAGGCCTCTTTTGGTCTCTTACTGGCGCTCCTCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: MSSQIMDSALCPHPS*FRPLLVSYWRSSLR
Trigger: TCTCAGGGAGGAGCGCCAGTAAGAGACCAAAAGAGGCCTGAAGCAGCTGGGATGAGGGCATAAAGCTGAGTCCATGATTTGAGAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CCA 90 bp TGGCGTGGCCACGAGCAGCTGCATAGTGCAAGGGCGTCCTCCCTCTaGAATCTTTACAGAGAATTGACACTTCTTGTTCCAGCAGCATTT +
Preference number: 5 (lower is better)
Translates to: WRGHEQLHSARASSL*NLYRELTLLVPAAF
Trigger: AAATGCTGCTGGAACAAGAAGTGTCAATTCTCTGTAAAGATTCCAGAGGGAGGACGCCCTTGCACTATGCAGCTGCTCGTGGCCACGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CCA 90 bp AACCTGTACTGCTTCTTCACTTCTGGAAGCAACAGCCCGGTGCAGTaGAGTCAGCCACATGTTGTCCTTGGCATTTACACGAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: NLYCFFTSGSNSPVQ*SQPHVVLGIYTSSR
Trigger: TCTGGAGCTCGTGTAAATGCCAAGGACAACATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAGTACAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CAA 90 bp TTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACTCTGCCACATCTGGCTCCCGAATTaGACAGCCCTCCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LEGRLIICSDSRKPSLCHIWLPN*TALPLL
Trigger: GAGCAGGGGGAGGGCTGTCAAATTCGGGAGCCAGAT...GTGGCAGAGTGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp GGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCACCTCGGTCGGAGACATaGACACTGCTCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GNYLLHGRIFLAVFPLEAPRSET*TLLSRG
Trigger: TCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAGG...TGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACTTGGCCAAGAGTAAATaGACCATCTCCACGTGGCCG +
Preference number: 5 (lower is better)
Translates to: RRRASRLQCLLSSKLATDLAKSK*TISTWP
Trigger: CGGCCACGTGGAGATGGTCAATTTACTCTTGGCCAA...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCTATGGATTCCACACTaGGCTGTGTCAGCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLLWIPH*AVSAPL
Trigger: CAGCGGAGCTGACACAGCCAAGTGTGGAATCCATAG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCATCGACCGCCTCCGGGTaGTCTGCAATTTCTAGCAAC +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSSTASG*SAISSN
Trigger: GTTGCTAGAAATTGCAGACAACCCGGAGGCGGTCGA...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGATTGTTCCAGCAGCATTaGCACACATTCCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGLFQQH*HTFLVS
Trigger: GGACACGAGGAATGTGTGCAAATGCTGCTGGAACAA...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGATTTGACCTAGAAGCTTaGGCAGAGGGAGCAGACACA +
Preference number: 5 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGFDLEA*AEGADT
Trigger: TGTGTCTGCTCCCTCTGCCAAAGCTTCTAGGTCAAA...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS GCA 90 bp ATCTCCTCTGACCAGGCTTCAAGGCTGACATTCACCAGGGTTCCCTaGCACCCCTGCCTTCACATTGATCTTCTCATCCTTTATACTTCC +
Preference number: 5 (lower is better)
Translates to: ISSDQASRLTFTRVP*HPCLHIDLLILYTS
Trigger: GGAAGTATAAAGGATGAGAAGATCAATGTGAAGGCAGGGGTGGCAGGGAACCCTGGTGAATGTCAGCCTTGAAGCCTGGTCAGAGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS-3UTR CAA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAAGCCACATGTTGTCCTaGGCATTTACACGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPSHMLS*AFTRAP
Trigger: AGGAGCTCGTGTAAATGCCAAGGACAACATGTGGCT...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAGGGGTCTGCCAGTTCTaGTCCCTTGCATTGACATCA +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSGVCQF*SLALTS
Trigger: TGATGTCAATGCAAGGGACAAGAACTGGCAGACCCC...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTTGGCCAAGAGTAAATaGACCATCTCCACGTGGCCG +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLLAKSK*TISTWP
Trigger: CGGCCACGTGGAGATGGTCAATTTACTCTTGGCCAA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp CCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTCCCTTCCCCAACCAGGTTCAGGAGATGCTaGACAACATTAATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: PNHRQARRIRLLPFPSPTRFRRC*TTLICP
Trigger: TGGACAGATTAATGTTGTCAAGCATCTCCTGAACCT...GGTTGGGGAAGGGAAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAACATGGAGAGGAGTGTaGCCGTCCTTATCCACACAG +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSTWRGV*PSLSTQ
Trigger: CTGTGTGGATAAGGACGGCAACACTCCTCTCCATGT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAAAGGACTTCCAAGGCTaGATGGTGCCCATTGTAGGC +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSKDFQG*MVPIVG
Trigger: GCCTACAATGGGCACCATCAAGCCTTGGAAGTCCTT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGAAGTGGTGTTTGTCCTTaGGCATCTTTCACATCGACC +
Preference number: 5 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGSGVCP*ASFTST
Trigger: GGTCGATGTGAAAGATGCCAAAGGACAAACACCACT...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACAGACAGGCAAGGCGATTGTTCCAGCAGCATTaGCACACATTCCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: SQLENKGCVLPNHRQARRLFQQH*HTFLVS
Trigger: GGACACGAGGAATGTGTGCAAATGCTGCTGGAACAA...TCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp CTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTCTCAGAAAGAGCCATTaGGAGCAGCTCGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: LIHNWSLRVPVLQPTDVLLRKSH*EQLAQP
Trigger: TGGCTGAGCGAGCTGCTCCAAATGGCTCTTTCTGAG...AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAAGGGGTGTCCTGCCTTaGTCATCTCTACAACTGACG +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSRGVLP*SSLQLT
Trigger: CGTCAGTTGTAGAGATGACAAAGGCAGGACACCCCT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS GCA 90 bp ATCAAAACCTGTACTGCTTCTTCACTTCTGGAAGCAACAGCCCGGTaGAGTGGAGTCAGCCACATGTTGTCCTTGGCATTTACACGAGCT +
Preference number: 5 (lower is better)
Translates to: IKTCTASSLLEATAR*SGVSHMLSLAFTRA
Trigger: AGCTCGTGTAAATGCCAAGGACAACATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000443014.1
ENST00000447713.1
ENST00000647377.1
CDS GCA 90 bp ACTGTGTCTCAGAAGAAGCTGCAAGCACTCCACATGATCAGCAAATaGTGCCGCATGAAGGGGTGTCCTGCCTTTGTCATCTCTACAACT +
Preference number: 5 (lower is better)
Translates to: TVSQKKLQALHMISK*CRMKGCPAFVISTT
Trigger: AGTTGTAGAGATGACAAAGGCAGGACACCCCTTCATGCGGCAGCATTTGCTGATCATGTGGAGTGCTTGCAGCTTCTTCTGAGACACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CCA 90 bp AGTATTCACATCTTCAGTTTTATGGATGAGCATCCGGATCTCCTCTaGATCACCGCTGAAGATTGCCTGAACCAATGGTGGCTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SIHIFSFMDEHPDLL*ITAEDCLNQWWLAS
Trigger: GGAGGCCAGCCACCATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATGCTCATCCATAAAACTGAAGATGTGAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS CCA 90 bp TCATCCAGCACCAAGTGCATGCAAGGTTTGAACCTCTTGTATCCCTaGATAATGGGCATCTCCTCTGACCAGGCTTCAAGGCTGACATTC +
Preference number: 5 (lower is better)
Translates to: SSSTKCMQGLNLLYP*IMGISSDQASRLTF
Trigger: GAATGTCAGCCTTGAAGCCTGGTCAGAGGAGATGCCCATTATCCAGGGATACAAGAGGTTCAAACCTTGCATGCACTTGGTGCTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAGGAGTCAGCCACATGTaGTCCTTGGCATTTACACGA +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSGVSHM*SLAFTR
Trigger: TCGTGTAAATGCCAAGGACAACATGTGGCTGACTCC...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp GCCTTGGGTGGTGGTGGGGCTCTAACCTGCAATGGAAGGCAGCATGGTGCAGTATTAACATCTGCCCCGTaGTTTACTAACAATTCAAGA +
Preference number: 5 (lower is better)
Translates to: ALGGGGALTCNGRQHGAVLTSAP*FTNNSR
Trigger: TCTTGAATTGTTAGTAAACAACGGGGCAGATGTTAA...TACTGCACCATGCTGCCTTCCATTGCAGGTTAGAGCCCCACCACCACCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCACATGGAGAGGAGTGTaGCCGTCCTTATCCACACAG +
Preference number: 5 (lower is better)
Translates to: VYTNFHGNAGVRRQKWYCTWRGV*PSLSTQ
Trigger: CTGTGTGGATAAGGACGGCAACACTCCTCTCCATGT...GCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp GTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGGTGCCTGTTACATGGAGAGGAGTGTaGCCGTCCTTATCCACACAG +
Preference number: 5 (lower is better)
Translates to: VAGIKCILIHNWSLRVPVTWRGV*PSLSTQ
Trigger: CTGTGTGGATAAGGACGGCAACACTCCTCTCCATGT...AACAGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAGGGGTCCTCCCACACTaGTCCTTTTTATGGAAATCT +
Preference number: 5 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPGVLPH*SFLWKS
Trigger: AGATTTCCATAAAAAGGACAAGTGTGGGAGGACCCC...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAAGTGGTGTTTGTCCTTaGGCATCTTTCACATCGACC +
Preference number: 5 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPSGVCP*ASFTST
Trigger: GGTCGATGTGAAAGATGCCAAAGGACAAACACCACT...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp AGGGTGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTTCAACAGTGTCTACGTaGGCTTCCTTTTCAAGTAAC +
Preference number: 5 (lower is better)
Translates to: RVRASQSQTGKANPVTPFSTVST*ASFSSN
Trigger: GTTACTTGAAAAGGAAGCCAACGTAGACACTGTTGA...AAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTTGTTCCAGCAGCATTaGCACACATTCCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLLFQQH*HTFLVS
Trigger: GGACACGAGGAATGTGTGCAAATGCTGCTGGAACAA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGAGTCTCATTCTTCTTTTaGTACAGCGGTTCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGVSFFF*YSGSRC
Trigger: ACACCTGGAACCGCTGTACAAAAAGAAGAATGAGAC...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACTCTGCCACCTGTGCTTAAAAGCCTaGGGTGGTGGTGGGGCTCTA +
Preference number: 5 (lower is better)
Translates to: LEGRLIICSDSRKPSLCHLCLKA*GGGGAL
Trigger: TAGAGCCCCACCACCACCCAAGGCTTTTAAGCACAG...GTGGCAGAGTGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp TGGGGCCATCTGTGTGACTGTTCCACCCAACAGCCTCACTGCCCTCCCTCGATTTTTAAACAAACGAAGTaGACAGCCATCATTGTACTG +
Preference number: 5 (lower is better)
Translates to: WGHLCDCSTQQPHCPPSIFKQTK*TAIIVL
Trigger: CAGTACAATGATGGCTGTCAACTTCGTTTGTTTAAA...AATCGAGGGAGGGCAGTGAGGCTGTTGGGTGGAACAGTCACACAGATGGCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS TCA 90 bp TGCATAGTGCAAGGGCGTCCTCCCTCTGGAATCTTTACAGAGAATTaGCACTTCTTGTTCCAGCAGCATTTGCACACATTCCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: CIVQGRPPSGIFTEN*HFLFQQHLHTFLVS
Trigger: GGACACGAGGAATGTGTGCAAATGCTGCTGGAACAAGAAGTGTCAATTCTCTGTAAAGATTCCAGAGGGAGGACGCCCTTGCACTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS GCA 90 bp CCAGGTTTACCTCTAATGAGCTCTCAAATCATGGACTCAGCTTTATaGCCTCATCCCAGCTGCTTCAGGCCTCTTTTGGTCTCTTACTGG +
Preference number: 5 (lower is better)
Translates to: PGLPLMSSQIMDSAL*PHPSCFRPLLVSYW
Trigger: CCAGTAAGAGACCAAAAGAGGCCTGAAGCAGCTGGGATGAGGGCATAAAGCTGAGTCCATGATTTGAGAGCTCATTAGAGGTAAACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CCA 90 bp AGTATTCACATCTTCAGTTTTATGGATGAGCATCCGGATCTCCTCTaGATCACCGCTGAAGATTGCCTGAACCAATGGTGGCTGGTCGGT +
Preference number: 5 (lower is better)
Translates to: SIHIFSFMDEHPDLL*ITAEDCLNQWWLVG
Trigger: ACCGACCAGCCACCATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATGCTCATCCATAAAACTGAAGATGTGAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282272.15
ENST00000409153.5
ENST00000409919.5
ENST00000447713.1
ENST00000463879.1
ENST00000647377.1
CDS CCA 90 bp AGTATTCACATCTTCAGTTTTATGGATGAGCATCCGGATCTCCTCTaGATCACCGCTGAAGATTGCCTGAACCAATGGTGGATGCCGTCC +
Preference number: 5 (lower is better)
Translates to: SIHIFSFMDEHPDLL*ITAEDCLNQWWMPS
Trigger: GGACGGCATCCACCATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATGCTCATCCATAAAACTGAAGATGTGAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443014.1
CDS-3UTR CAA 90 bp GGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAGGGGTCTGCCAGTTCTaGTCCCTTGCATTGACATCA +
Preference number: 5 (lower is better)
Translates to: GNYLLHGRIFLAVFPLEAGVCQF*SLALTS
Trigger: TGATGTCAATGCAAGGGACAAGAACTGGCAGACCCC...TGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGCCTCGGTCGGAGACATaGACACTGCTCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTPRSET*TLLSRG
Trigger: TCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAGG...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGCCTCGGTCGGAGACATaGACACTGCTCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: NTKPYLLIGLYQLPWQCWPRSET*TLLSRG
Trigger: TCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAGG...CCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAACCTCGGTCGGAGACATaGACACTGCTCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEPRSET*TLLSRG
Trigger: TCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAGG...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGATTCTTGTCAAATGCATaGATATTTGCCCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGFLSNA*IFAPLA
Trigger: GGCCAAAGGGGCAAATATCAATGCATTTGACAAGAA...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTACATTAATCTGTCCATaGGAGGCTGCAGCATGCAGA +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLTLICP*EAAACR
Trigger: TCTGCATGCTGCAGCCTCCAATGGACAGATTAATGT...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTGGGGTGAACCCATTATaGTTTGGCTGGTTCACGTTA +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLGVNPL*FGWFTL
Trigger: TAACGTGAACCAGCCAAACAATAATGGGTTCACCCC...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp GCAGAGTGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAAGGACTTCCAAGGCTaGATGGTGCCCATTGTAGGC +
Preference number: 5 (lower is better)
Translates to: AECNPLRSVAGIKCILIHKDFQG*MVPIVG
Trigger: GCCTACAATGGGCACCATCAAGCCTTGGAAGTCCTT...ATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTCAGCGGCGTGTAGCCTaGGTTATCTTTGAAACAACA +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLQRRVA*VIFETT
Trigger: TGTTGTTTCAAAGATAACCAAGGCTACACGCCGCTG...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGACCACCTTTAAGCCATaGCGCGCAGCGACGTGGAGG +
Preference number: 5 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVTTFKP*RAATWR
Trigger: CCTCCACGTCGCTGCGCGCAATGGCTTAAAGGTGGT...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TACAGACTGTGGCTGAGCAGTAGAAGATGCGTAGCCCTCTCTAACCAACGCGGACATTTCATTTCCTGCTaGAAATGCCAACTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: YRLWLSSRRCVALSNQRGHFISC*KCQLSK
Trigger: CTTGCTCAGTTGGCATTTCAAGCAGGAAATGAAATG...TCCGCGTTGGTTAGAGAGGGCTACGCATCTTCTACTGCTCAGCCACAGTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACTAAAACTGCCCAGCTaGGTCAGCACTTGTAGGTAT +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSLKLPS*VSTCRY
Trigger: ATACCTACAAGTGCTGACCAAGCTGGGCAGTTTTAG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATATCCTCCGAGCCTACGTaGTTACTGCACAGGCTAACC +
Preference number: 5 (lower is better)
Translates to: SILVLMCSWLMNYTHTHISSEPT*LLHRLT
Trigger: GGTTAGCCTGTGCAGTAACAACGTAGGCTCGGAGGA...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS GCA 90 bp AGCATGCAGAGGGGTATAACCCTTCTTATCCTTACAGGTCACTTCTaGGCCATGGTTAATGAGCAATGCTACAACATCCAAGTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: SMQRGITLLILTGHF*AMVNEQCYNIQVAH
Trigger: ATGGGCCACTTGGATGTTGTAGCATTGCTCATTAACCATGGCGCAGAAGTGACCTGTAAGGATAAGAAGGGTTATACCCCTCTGCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000647377.1
CDS GCA 90 bp CAGGTTCAGGAGATGCTTGACAACATTAATCTGTCCATTGGAGGCTaGAGCATGCAGAGGGGTATAACCCTTCTTATCCTTACAGGTCAC +
Preference number: 5 (lower is better)
Translates to: QVQEMLDNINLSIGG*SMQRGITLLILTGH
Trigger: GTGACCTGTAAGGATAAGAAGGGTTATACCCCTCTGCATGCTGCAGCCTCCAATGGACAGATTAATGTTGTCAAGCATCTCCTGAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000647377.1
CDS CCA 90 bp CTTGGCATTTACACGAGCTCCAGAGTATTCACATCTTCAGTTTTATaGATGAGCATCCGGATCTCCTCTGGATCACCGCTGAAGATTGCC +
Preference number: 5 (lower is better)
Translates to: LGIYTSSRVFTSSVL*MSIRISSGSPLKIA
Trigger: GGCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATGCTCATCCATAAAACTGAAGATGTGAATACTCTGGAGCTCGTGTAAATGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CAA 90 bp AACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTATCTGGCTCCCGAATTaGACAGCCCTCCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: NLDKWELSTARKNLFGSIIWLPN*TALPLL
Trigger: GAGCAGGGGGAGGGCTGTCAAATTCGGGAGCCAGAT...AATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGGGCTGGTCGGTGAGTTaGAGCACTGCCATTCTTCCG +
Preference number: 5 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTGWSVS*STAILP
Trigger: CGGAAGAATGGCAGTGCTCAAACTCACCGACCAGCC...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTATAGGAGTCAGCCACATGTaGTCCTTGGCATTTACACGA +
Preference number: 5 (lower is better)
Translates to: TNFHGNAGVRRQKWYCLIGVSHM*SLAFTR
Trigger: TCGTGTAAATGCCAAGGACAACATGTGGCTGACTCC...TATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTTCTTGTCCCTTGCATaGACATCAGCTGAGTGCTTA +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLFLSLA*TSAECL
Trigger: TAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTGCACGCCGGTCCTTCTaGTCAAATGCATTGATATTT +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLARRSF*SNALIF
Trigger: AAATATCAATGCATTTGACAAGAAGGACCGGCGTGC...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp AGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACCAAGGTTCAGGAGATGCTaGACAACATTAATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: RYVTVTFMQGKPGLHLSPRFRRC*TTLICP
Trigger: TGGACAGATTAATGTTGTCAAGCATCTCCTGAACCT...TGGTGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp AGGGTGCGTGCTTCCCAATCACAGACAGGCAAGGCGAATCCGGTTACTCCCTTTTTAACATCTGCCCCGTaGTTTACTAACAATTCAAGA +
Preference number: 5 (lower is better)
Translates to: RVRASQSQTGKANPVTPFLTSAP*FTNNSR
Trigger: TCTTGAATTGTTAGTAAACAACGGGGCAGATGTTAA...AAAGGGAGTAACCGGATTCGCCTTGCCTGTCTGTGATTGGGAAGCACGCACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp CACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGTGCTATGGATTCCACACTaGGCTGTGTCAGCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: HKAIFANRSIPTSMAMLVLWIPH*AVSAPL
Trigger: CAGCGGAGCTGACACAGCCAAGTGTGGAATCCATAG...CACCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCATCTGTTTCATTAACGTaGGCCCCTGTGGTCACTAAT +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSSVSLT*APVVTN
Trigger: ATTAGTGACCACAGGGGCCAACGTTAATGAAACAGA...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCGACCGCCTCCGGGTaGTCTGCAATTTCTAGCAAC +
Preference number: 5 (lower is better)
Translates to: CNPLRSVAGIKCILIHNWSTASG*SAISSN
Trigger: GTTGCTAGAAATTGCAGACAACCCGGAGGCGGTCGA...CCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTAAGCATCAGTGGTGTTaGTCCTTTGGCATCTTTCAC +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLKHQWC*SFGIFH
Trigger: GTGAAAGATGCCAAAGGACAAACACCACTGATGCTT...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACTTTTTATTTCTCCTTTaGGCACATGTGCCCACACAC +
Preference number: 5 (lower is better)
Translates to: RRRASRLQCLLSSKLATDFLFLL*AHVPTH
Trigger: GTGTGTGGGCACATGTGCCAAAAGGAGAAATAAAAA...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCGCAGAGTGTAACCCTTaGCGTTCTGTGGCTGGGATA +
Preference number: 5 (lower is better)
Translates to: NPLRSVAGIKCILIHNWSAECNP*RSVAGI
Trigger: TATCCCAGCCACAGAACGCAAAGGGTTACACTCTGC...GGACCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACACCATGCTACCCAGATaGGAGAGGGTCGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: GGNGTHYKTSESTALIRHTMLPR*ERVVLL
Trigger: GAGCAGGACGACCCTCTCCAATCTGGGTAGCATGGT...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS GCA 90 bp GCATTTGGTAAATTCAGCTATGGAGGTCAGTCATCCAGCACCAAGTaGATGCAAGGTTTGAACCTCTTGTATCCCTGGATAATGGGCATC +
Preference number: 5 (lower is better)
Translates to: AFGKFSYGGQSSSTK*MQGLNLLYPWIMGI
Trigger: GATGCCCATTATCCAGGGATACAAGAGGTTCAAACCTTGCATGCACTTGGTGCTGGATGACTGACCTCCATAGCTGAATTTACCAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS-3UTR CAA 90 bp TGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTGGAGTCAGCCACATGTaGTCCTTGGCATTTACACGA +
Preference number: 5 (lower is better)
Translates to: CTEESFWQYSHLRQLFHRGVSHM*SLAFTR
Trigger: TCGTGTAAATGCCAAGGACAACATGTGGCTGACTCC...ACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp GTCTATACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCTTCTTGTCCCTTGCATaGACATCAGCTGAGTGCTTA +
Preference number: 5 (lower is better)
Translates to: VYTNFHGNAGVRRQKWYCFLSLA*TSAECL
Trigger: TAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAA...GCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGTATAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGTTGGCCAAGAGTAAATaGACCATCTCCACGTGGCCG +
Preference number: 5 (lower is better)
Translates to: WEKEKERKRERERSVDVMLAKSK*TISTWP
Trigger: CGGCCACGTGGAGATGGTCAATTTACTCTTGGCCAA...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTTGATATTTGCCCCTTaGGCCAAGAGTAAATTGACC +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLLIFAP*AKSKLT
Trigger: GGTCAATTTACTCTTGGCCAAAGGGGCAAATATCAA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTTCTTGTCAAATGCATaGATATTTGCCCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLFLSNA*IFAPLA
Trigger: GGCCAAAGGGGCAAATATCAATGCATTTGACAAGAA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp ACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTATAACATTAATCTGTCCATaGGAGGCTGCAGCATGCAGA +
Preference number: 5 (lower is better)
Translates to: TNFHGNAGVRRQKWYCLITLICP*EAAACR
Trigger: TCTGCATGCTGCAGCCTCCAATGGACAGATTAATGT...TATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp GCAGAGTGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATGGGGTGAACCCATTATaGTTTGGCTGGTTCACGTTA +
Preference number: 5 (lower is better)
Translates to: AECNPLRSVAGIKCILIHGVNPL*FGWFTL
Trigger: TAACGTGAACCAGCCAAACAATAATGGGTTCACCCC...ATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAACAGTGTCTACGTaGGCTTCCTTTTCAAGTAAC +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLSTVST*ASFSSN
Trigger: GTTACTTGAAAAGGAAGCCAACGTAGACACTGTTGA...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGAGGGGTGTCCTGCCTTaGTCATCTCTACAACTGACG +
Preference number: 5 (lower is better)
Translates to: CNPLRSVAGIKCILIHNWRGVLP*SSLQLT
Trigger: CGTCAGTTGTAGAGATGACAAAGGCAGGACACCCCT...CCAATTATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAACCACCTTTAAGCCATaGCGCGCAGCGACGTGGAGG +
Preference number: 5 (lower is better)
Translates to: TQHISTPSCSTVQRITSATTFKP*RAATWR
Trigger: CCTCCACGTCGCTGCGCGCAATGGCTTAAAGGTGGT...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAAGTACACAGGCCCCTTaGGCCAGCAACTCCTCAACT +
Preference number: 5 (lower is better)
Translates to: PFTSRKRHRSILCFFNTESTQAP*ASNSST
Trigger: AGTTGAGGAGTTGCTGGCCAAAGGGGCCTGTGTACT...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ACAGTTCATTGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTTTGGCCCTTGGGCTTTaGGCTAGCCCAGGGTCAAGT +
Preference number: 5 (lower is better)
Translates to: TVHCEHDFISFLCPPSMSLALGL*ASPGSS
Trigger: ACTTGACCCTGGGCTAGCCAAAAGCCCAAGGGCCAA...ACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACAATGAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGTTTGCGGTAACCTACTaGGCTGTGTCAGCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: STLTWINGNYLLHGRIFLFAVTY*AVSAPL
Trigger: CAGCGGAGCTGACACAGCCAAGTAGGTTACCGCAAA...CAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp AAGAGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCTCAGGGTGCCTGTTTaGCAGCCAACCGATGTTCTT +
Preference number: 5 (lower is better)
Translates to: KRNFQYLVPSWKIKGACFLRVPV*QPTDVL
Trigger: AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAG...GAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp CTGATTCATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTTGTATCTTGTTCCCAGTaGGAAAATAAAGGGTGCGTG +
Preference number: 5 (lower is better)
Translates to: LIHNWSLRVPVLQPTDVLVSCSQ*ENKGCV
Trigger: CACGCACCCTTTATTTTCCAACTGGGAACAAGATAC...AAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTATGAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp GCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTGCTTCTTCACTTCTGGGAGTCAGCCACATGTaGTCCTTGGCATTTACACGA +
Preference number: 5 (lower is better)
Translates to: ALTSAECLIKTCTASSLLGVSHM*SLAFTR
Trigger: TCGTGTAAATGCCAAGGACAACATGTGGCTGACTCC...CAGAAGTGAAGAAGCAGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CAA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACGGGGTCTGCCAGTTCTaGTCCCTTGCATTGACATCA +
Preference number: 5 (lower is better)
Translates to: GGNGTHYKTSESTALIRHGVCQF*SLALTS
Trigger: TGATGTCAATGCAAGGGACAAGAACTGGCAGACCCC...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGGGGGTCTGCCAGTTCTaGTCCCTTGCATTGACATCA +
Preference number: 5 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTGVCQF*SLALTS
Trigger: TGATGTCAATGCAAGGGACAAGAACTGGCAGACCCC...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AGGCAGAAATGGTACTGCCTTATATCGATGACTACCATGCTTTTGTGCTGTGCTGGGGTGAACCCATTATaGTTTGGCTGGTTCACGTTA +
Preference number: 5 (lower is better)
Translates to: RQKWYCLISMTTMLLCCAGVNPL*FGWFTL
Trigger: TAACGTGAACCAGCCAAACAATAATGGGTTCACCCC...AGCACAGCACAAAAGCATGGTAGTCATCGATATAAGGCAGTACCATTTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp TTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGCCTTCACTCTGCCACTCTGTTTCATTAACGTaGGCCCCTGTGGTCACTAAT +
Preference number: 5 (lower is better)
Translates to: LEGRLIICSDSRKPSLCHSVSLT*APVVTN
Trigger: ATTAGTGACCACAGGGGCCAACGTTAATGAAACAGA...GTGGCAGAGTGAAGGCTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp GTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCACAGACAGTCTGTTTCATTAACGTaGGCCCCTGTGGTCACTAAT +
Preference number: 5 (lower is better)
Translates to: VSCSQLENKGCVLPNHRQSVSLT*APVVTN
Trigger: ATTAGTGACCACAGGGGCCAACGTTAATGAAACAGA...CTGTCTGTGATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACAAGGACTTCCAAGGCTaGATGGTGCCCATTGTAGGC +
Preference number: 5 (lower is better)
Translates to: GGNGTHYKTSESTALIRHKDFQG*MVPIVG
Trigger: GCCTACAATGGGCACCATCAAGCCTTGGAAGTCCTT...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CGCAGAAGGGCATCCAGACTGCAATGTCTTCTAAGCTCTAAGCTGGCTACAGACGGATTACCGATAAATTaGCGAAAACATTTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: RRRASRLQCLLSSKLATDGLPIN*RKHFCS
Trigger: GGAGCAAAAATGTTTTCGCAAATTTATCGGTAATCC...GTCTGTAGCCAGCTTAGAGCTTAGAAGACATTGCAGTCTGGATGCCCTTCTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCACTCTCGTCTTGTATCTaGTCAAGTATTAACAAGGCA +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSLSSCI*SSINKA
Trigger: TGCCTTGTTAATACTTGACAAGATACAAGACGAGAG...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACGTGGAAATGCTAGGTTaGGCCCTTGGGCTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: GGNGTHYKTSESTALIRHVEMLG*ALGLLA
Trigger: AGCCAAAAGCCCAAGGGCCAAACCTAGCATTTCCAC...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp GCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTGCTTCTTCACTTCTGAGCCACATGTTGTCCTaGGCATTTACACGAGCTCCA +
Preference number: 5 (lower is better)
Translates to: ALTSAECLIKTCTASSLLSHMLS*AFTRAP
Trigger: TGGAGCTCGTGTAAATGCCAAGGACAACATGTGGCT...CAGAAGTGAAGAAGCAGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS TCA 90 bp GGGGTTCTTTTGGTTACATTGTCTTTCACAAAGATGGATGCGCCCTaGTTGATAAGCGCTTCCACACATTCTGTGTGTCCTTTAAAGGCA +
Preference number: 5 (lower is better)
Translates to: GVLLVTLSFTKMDAP*LISASTHSVCPLKA
Trigger: TGCCTTTAAAGGACACACAGAATGTGTGGAAGCGCTTATCAATCAGGGCGCATCCATCTTTGTGAAAGACAATGTAACCAAAAGAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000422886.5
ENST00000424317.5
ENST00000647377.1
CDS TCA 90 bp ATCTCTACAACTGACGATACTGGAATCTATGGCCCCAAGCAGCAATaGTGCACAATTCCCATGATCATTGATTATTGCACAGTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: ISTTDDTGIYGPKQQ*CTIPMIIDYCTVQW
Trigger: CCACTGCACTGTGCAATAATCAATGATCATGGGAATTGTGCATCATTGCTGCTTGGGGCCATAGATTCCAGTATCGTCAGTTGTAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS TCA 90 bp CCTGGCCTGCTAAGTCCTTACTCAACCTTTAAGGACCAGATCAACTaGCATCTCTTCTTGGAAGATTTCCTCTATTCAAGCAGGCAGTTA +
Preference number: 5 (lower is better)
Translates to: PGLLSPYSTFKDQIN*HLFLEDFLYSSRQL
Trigger: TAACTGCCTGCTTGAATAGAGGAAATCTTCCAAGAAGAGATGTCAGTTGATCTGGTCCTTAAAGGTTGAGTAAGGACTTAGCAGGCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS-3UTR CAA 90 bp AACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGGCAATGCTGGAGCCACATGTTGTCCTaGGCATTTACACGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: NTKPYLLIGLYQLPWQCWSHMLS*AFTRAP
Trigger: AGGAGCTCGTGTAAATGCCAAGGACAACATGTGGCT...CCAGCATTGCCATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAGGAGTCAGCCACATGTaGTCCTTGGCATTTACACGA +
Preference number: 5 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEGVSHM*SLAFTR
Trigger: TCGTGTAAATGCCAAGGACAACATGTGGCTGACTCC...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATATTCTTGTCCCTTGCATaGACATCAGCTGAGTGCTTA +
Preference number: 5 (lower is better)
Translates to: SILVLMCSWLMNYTHTHIFLSLA*TSAECL
Trigger: TAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAA...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ATCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTTTGGCCAAGAGTAAATaGACCATCTCCACGTGGCCG +
Preference number: 5 (lower is better)
Translates to: IHLNLDKWELSTARKNLFLAKSK*TISTWP
Trigger: CGGCCACGTGGAGATGGTCAATTTACTCTTGGCCAA...AAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGAT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp ACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTATATTCTTGTCAAATGCATaGATATTTGCCCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: TNFHGNAGVRRQKWYCLIFLSNA*IFAPLA
Trigger: GGCCAAAGGGGCAAATATCAATGCATTTGACAAGAA...TATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp ACCAACTTCCATGGCAATGCTGGTGTTAGGAGGCAGAAATGGTACTGCCTTATAAGGTTCAGGAGATGCTaGACAACATTAATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: TNFHGNAGVRRQKWYCLIRFRRC*TTLICP
Trigger: TGGACAGATTAATGTTGTCAAGCATCTCCTGAACCT...TATAAGGCAGTACCATTTCTGCCTCCTAACACCAGCATTGCCATGGAAGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCATTAACATCTGCCCCGTaGTTTACTAACAATTCAAGA +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSLTSAP*FTNNSR
Trigger: TCTTGAATTGTTAGTAAACAACGGGGCAGATGTTAA...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTACATGGAGAGGAGTGTaGCCGTCCTTATCCACACAG +
Preference number: 5 (lower is better)
Translates to: FQGGNGTHYKTSESTALITWRGV*PSLSTQ
Trigger: CTGTGTGGATAAGGACGGCAACACTCCTCTCCATGT...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTACATGGAGAGGAGTGTaGCCGTCCTTATCCACACAG +
Preference number: 5 (lower is better)
Translates to: YLLHGRIFLAVFPLEAIITWRGV*PSLSTQ
Trigger: CTGTGTGGATAAGGACGGCAACACTCCTCTCCATGT...AATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp GAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATGGGGTCCTCCCACACTaGTCCTTTTTATGGAAATCT +
Preference number: 5 (lower is better)
Translates to: EFPVSCSQLENKGCVLPNGVLPH*SFLWKS
Trigger: AGATTTCCATAAAAAGGACAAGTGTGGGAGGACCCC...ATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGGGGGTCCTCCCACACTaGTCCTTTTTATGGAAATCT +
Preference number: 5 (lower is better)
Translates to: WEKEKERKRERERSVDVMGVLPH*SFLWKS
Trigger: AGATTTCCATAAAAAGGACAAGTGTGGGAGGACCCC...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTAAGGACTTCCAAGGCTaGATGGTGCCCATTGTAGGC +
Preference number: 5 (lower is better)
Translates to: FQGGNGTHYKTSESTALIKDFQG*MVPIVG
Trigger: GCCTACAATGGGCACCATCAAGCCTTGGAAGTCCTT...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCATCGACCGCCTCCGGGTaGTCTGCAATTTCTAGCAAC +
Preference number: 5 (lower is better)
Translates to: TQHISTPSCSTVQRITSASTASG*SAISSN
Trigger: GTTGCTAGAAATTGCAGACAACCCGGAGGCGGTCGA...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AAGAGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCAGTGGTGTTTGTCCTTaGGCATCTTTCACATCGACC +
Preference number: 5 (lower is better)
Translates to: KRNFQYLVPSWKIKGACFSGVCP*ASFTST
Trigger: GGTCGATGTGAAAGATGCCAAAGGACAAACACCACT...GAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAATTGTTCCAGCAGCATTaGCACACATTCCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: PFTSRKRHRSILCFFNTELFQQH*HTFLVS
Trigger: GGACACGAGGAATGTGTGCAAATGCTGCTGGAACAA...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTTCAAATCTTTACAGAGAATaGACACTTCTTGTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: CRYVTVTFMQGKPGLHLSNLYRE*TLLVPA
Trigger: TGCTGGAACAAGAAGTGTCAATTCTCTGTAAAGATT...TGAAAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTACTCAGAAAGAGCCATTaGGAGCAGCTCGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLLRKSH*EQLAQP
Trigger: TGGCTGAGCGAGCTGCTCCAAATGGCTCTTTCTGAG...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ACTTGTAGGTATGTGACTGTCACCTTCATGCAGGGGAAGCCAGGACTGCATCTTGGATTACCGATAAATTaGCGAAAACATTTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: TCRYVTVTFMQGKPGLHLGLPIN*RKHFCS
Trigger: GGAGCAAAAATGTTTTCGCAAATTTATCGGTAATCC...AAGATGCAGTCCTGGCTTCCCCTGCATGAAGGTGACAGTCACATACCTACAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328737.6
CDS-3UTR CAA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAAGGGGTGTCCTGCCTTaGTCATCTCTACAACTGACG +
Preference number: 5 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSRGVLP*SSLQLT
Trigger: CGTCAGTTGTAGAGATGACAAAGGCAGGACACCCCT...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp GCAGAGTGTAACCCTTTGCGTTCTGTGGCTGGGATAAAGTGCATTCTGATTCATAGCCAACCGATGTTCTaGGATCTTGAATGGTTAACA +
Preference number: 5 (lower is better)
Translates to: AECNPLRSVAGIKCILIHSQPMF*DLEWLT
Trigger: TGTTAACCATTCAAGATCCAAGAACATCGGTTGGCT...ATGAATCAGAATGCACTTTATCCCAGCCACAGAACGCAAAGGGTTACACTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS GCA 90 bp ATGAAGTGGGGTTCTTTTGGTTACATTGTCTTTCACAAAGATGGATaGGCCCTGATTGATAAGCGCTTCCACACATTCTGTGTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: MKWGSFGYIVFHKDG*ALIDKRFHTFCVSF
Trigger: AAAGGACACACAGAATGTGTGGAAGCGCTTATCAATCAGGGCGCATCCATCTTTGTGAAAGACAATGTAACCAAAAGAACCCCACTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000422886.5
ENST00000424317.5
ENST00000647377.1
CDS GCA 90 bp CTGGAATCTTTACAGAGAATTGACACTTCTTGTTCCAGCAGCATTTaGACACATTCCTCGTGTCCTGTCATAATCCCTCTGTGTAAAGCT +
Preference number: 5 (lower is better)
Translates to: LESLQRIDTSCSSSI*THSSCPVIIPLCKA
Trigger: AGCTTTACACAGAGGGATTATGACAGGACACGAGGAATGTGTGCAAATGCTGCTGGAACAAGAAGTGTCAATTCTCTGTAAAGATTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CCA 90 bp GCAGAAACTCTAGACATAGTGTGGCTTCCTTTTCCTTCAGCTCCCTaGCTCTTTCAAGTTCTTCTGAATTATCATGGGCATTTCCTAAGA +
Preference number: 5 (lower is better)
Translates to: AETLDIVWLPFPSAP*LFQVLLNYHGHFLR
Trigger: TCTTAGGAAATGCCCATGATAATTCAGAAGAACTTGAAAGAGCCAGGGAGCTGAAGGAAAAGGAAGCCACACTATGTCTAGAGTTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000422886.5
ENST00000424317.5
ENST00000647377.1
CDS-3UTR CAA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAAGCCACATGTTGTCCTaGGCATTTACACGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSSHMLS*AFTRAP
Trigger: AGGAGCTCGTGTAAATGCCAAGGACAACATGTGGCT...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTAGCCACATGTTGTCCTaGGCATTTACACGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: NLDKWELSTARKNLFGSISHMLS*AFTRAP
Trigger: AGGAGCTCGTGTAAATGCCAAGGACAACATGTGGCT...AATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGTTCTTGTCCCTTGCATaGACATCAGCTGAGTGCTTA +
Preference number: 5 (lower is better)
Translates to: WEKEKERKRERERSVDVMFLSLA*TSAECL
Trigger: TAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAA...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CAGTTCTTGTCCCTTGCATTGACATCAGCTGAGTGCTTAATCAAAACCTGTACTTTCTTGTCCCTTGCATaGACATCAGCTGAGTGCTTA +
Preference number: 5 (lower is better)
Translates to: QFLSLALTSAECLIKTCTFLSLA*TSAECL
Trigger: TAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAA...AGTACAGGTTTTGATTAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS-3UTR CAA 90 bp ATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTATACCAACTTCCATGTTGGCCAAGAGTAAATaGACCATCTCCACGTGGCCG +
Preference number: 5 (lower is better)
Translates to: MGSKHKAIFANRSIPTSMLAKSK*TISTWP
Trigger: CGGCCACGTGGAGATGGTCAATTTACTCTTGGCCAA...CATGGAAGTTGGTATAGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATATTGATATTTGCCCCTTaGGCCAAGAGTAAATTGACC +
Preference number: 5 (lower is better)
Translates to: SILVLMCSWLMNYTHTHILIFAP*AKSKLT
Trigger: GGTCAATTTACTCTTGGCCAAAGGGGCAAATATCAA...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACACATTAATCTGTCCATaGGAGGCTGCAGCATGCAGA +
Preference number: 5 (lower is better)
Translates to: GGNGTHYKTSESTALIRHTLICP*EAAACR
Trigger: TCTGCATGCTGCAGCCTCCAATGGACAGATTAATGT...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATAAGGTTCAGGAGATGCTaGACAACATTAATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: SILVLMCSWLMNYTHTHIRFRRC*TTLICP
Trigger: TGGACAGATTAATGTTGTCAAGCATCTCCTGAACCT...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TGTGAGCATGATTTCATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGGGTGAACCCATTATaGTTTGGCTGGTTCACGTTA +
Preference number: 5 (lower is better)
Translates to: CEHDFISFLCPPSMSKRVGVNPL*FGWFTL
Trigger: TAACGTGAACCAGCCAAACAATAATGGGTTCACCCC...CACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAATGAAATCATGCTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTGGGGTGAACCCATTATaGTTTGGCTGGTTCACGTTA +
Preference number: 5 (lower is better)
Translates to: LNLDKWELSTARKNLFGSGVNPL*FGWFTL
Trigger: TAACGTGAACCAGCCAAACAATAATGGGTTCACCCC...ACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAACATGGAGAGGAGTGTaGCCGTCCTTATCCACACAG +
Preference number: 5 (lower is better)
Translates to: TQHISTPSCSTVQRITSATWRGV*PSLSTQ
Trigger: CTGTGTGGATAAGGACGGCAACACTCCTCTCCATGT...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACCTATGGATTCCACACTaGGCTGTGTCAGCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNLWIPH*AVSAPL
Trigger: CAGCGGAGCTGACACAGCCAAGTGTGGAATCCATAG...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AAGAGGAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCAAGCATCAGTGGTGTTaGTCCTTTGGCATCTTTCAC +
Preference number: 5 (lower is better)
Translates to: KRNFQYLVPSWKIKGACFKHQWC*SFGIFH
Trigger: GTGAAAGATGCCAAAGGACAAACACCACTGATGCTT...GAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGAAGCATCAGTGGTGTTaGTCCTTTGGCATCTTTCAC +
Preference number: 5 (lower is better)
Translates to: WEKEKERKRERERSVDVMKHQWC*SFGIFH
Trigger: GTGAAAGATGCCAAAGGACAAACACCACTGATGCTT...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAACAGCGGCGTGTAGCCTaGGTTATCTTTGAAACAACA +
Preference number: 5 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEQRRVA*VIFETT
Trigger: TGTTGTTTCAAAGATAACCAAGGCTACACGCCGCTG...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp GTGGCTGGGATAAAGTGCATTCTGATTCATAATTGGTCCCTCAGGGTGCCTGTTGGATTACCGATAAATTaGCGAAAACATTTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: VAGIKCILIHNWSLRVPVGLPIN*RKHFCS
Trigger: GGAGCAAAAATGTTTTCGCAAATTTATCGGTAATCC...AACAGGCACCCTGAGGGACCAATTATGAATCAGAATGCACTTTATCCCAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTAAGGGGTGTCCTGCCTTaGTCATCTCTACAACTGACG +
Preference number: 5 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLRGVLP*SSLQLT
Trigger: CGTCAGTTGTAGAGATGACAAAGGCAGGACACCCCT...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS GCA 90 bp TCTTCACCCGAATTTCCAGCATTCAACAACAAATTATTTCTTGGATaGCTAGACTGTACCAGGCTTGGGATACATCCAGGAACAAAGTAC +
Preference number: 5 (lower is better)
Translates to: SSPEFPAFNNKLFLG*LDCTRLGIHPGTKY
Trigger: GTACTTTGTTCCTGGATGTATCCCAAGCCTGGTACAGTCTAGGCATCCAAGAAATAATTTGTTGTTGAATGCTGGAAATTCGGGTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CCA 90 bp CTCTGTGTAAAGCTGTGCATCCTAGGATGTCAACAGTGTCTACGTTaGCTTCCTTTTCAAGTAACAATGAAACAGCGTCAATATGTCCAT +
Preference number: 5 (lower is better)
Translates to: LCVKLCILGCQQCLR*LPFQVTMKQRQYVH
Trigger: ATGGACATATTGACGCTGTTTCATTGTTACTTGAAAAGGAAGCCAACGTAGACACTGTTGACATCCTAGGATGCACAGCTTTACACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS-3UTR CAA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTAAGCCACATGTTGTCCTaGGCATTTACACGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLSHMLS*AFTRAP
Trigger: AGGAGCTCGTGTAAATGCCAAGGACAACATGTGGCT...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TATAGATCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTCTTGTCCCTTGCATaGACATCAGCTGAGTGCTTA +
Preference number: 5 (lower is better)
Translates to: YRSTLTWINGNYLLHGRIFLSLA*TSAECL
Trigger: TAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAA...GATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGATCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp AGGAGCATTTCTTATATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTGGGGTCTGCCAGTTCTaGTCCCTTGCATTGACATCA +
Preference number: 5 (lower is better)
Translates to: RSISYMGSKHKAIFANRSGVCQF*SLALTS
Trigger: TGATGTCAATGCAAGGGACAAGAACTGGCAGACCCC...AGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCATATAAGAAATGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGTTCTTGTCAAATGCATaGATATTTGCCCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: WEKEKERKRERERSVDVMFLSNA*IFAPLA
Trigger: GGCCAAAGGGGCAAATATCAATGCATTTGACAAGAA...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCACGCCGGTCCTTCTaGTCAAATGCATTGATATTT +
Preference number: 5 (lower is better)
Translates to: STLTWINGNYLLHGRIFLARRSF*SNALIF
Trigger: AAATATCAATGCATTTGACAAGAAGGACCGGCGTGC...CAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp AACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTACATTAATCTGTCCATaGGAGGCTGCAGCATGCAGA +
Preference number: 5 (lower is better)
Translates to: NLDKWELSTARKNLFGSITLICP*EAAACR
Trigger: TCTGCATGCTGCAGCCTCCAATGGACAGATTAATGT...AATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGGGGTGAACCCATTATaGTTTGGCTGGTTCACGTTA +
Preference number: 5 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTGVNPL*FGWFTL
Trigger: TAACGTGAACCAGCCAAACAATAATGGGTTCACCCC...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp GGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCATTAACATCTGCCCCGTaGTTTACTAACAATTCAAGA +
Preference number: 5 (lower is better)
Translates to: GNYLLHGRIFLAVFPLEALTSAP*FTNNSR
Trigger: TCTTGAATTGTTAGTAAACAACGGGGCAGATGTTAA...TGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTGGGGTCCTCCCACACTaGTCCTTTTTATGGAAATCT +
Preference number: 5 (lower is better)
Translates to: FQGGNGTHYKTSESTALIGVLPH*SFLWKS
Trigger: AGATTTCCATAAAAAGGACAAGTGTGGGAGGACCCC...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGTCTGTTTCATTAACGTaGGCCCCTGTGGTCACTAAT +
Preference number: 5 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTSVSLT*APVVTN
Trigger: ATTAGTGACCACAGGGGCCAACGTTAATGAAACAGA...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAAGTGGTGTTTGTCCTTaGGCATCTTTCACATCGACC +
Preference number: 5 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSSGVCP*ASFTST
Trigger: GGTCGATGTGAAAGATGCCAAAGGACAAACACCACT...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGTCAACAGTGTCTACGTaGGCTTCCTTTTCAAGTAAC +
Preference number: 5 (lower is better)
Translates to: WEKEKERKRERERSVDVMSTVST*ASFSSN
Trigger: GTTACTTGAAAAGGAAGCCAACGTAGACACTGTTGA...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AGCATTTTGGTCCTCATGTGTAGCTGGCTGATGAACTACACACACACACACATACTCTCGTCTTGTATCTaGTCAAGTATTAACAAGGCA +
Preference number: 5 (lower is better)
Translates to: SILVLMCSWLMNYTHTHILSSCI*SSINKA
Trigger: TGCCTTGTTAATACTTGACAAGATACAAGACGAGAG...TATGTGTGTGTGTGTGTAGTTCATCAGCCAGCTACACATGAGGACCAAAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTTGGCAGTATTCCCACTaGAGGCAATTATTCCACCGT +
Preference number: 5 (lower is better)
Translates to: YLLHGRIFLAVFPLEAIIWQYSH*RQLFHR
Trigger: ACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCA...AATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS GCA 90 bp AAGGCACGTTCTTCCAAATTTATCTGGGGTGTCTATTTCAAAGCCTaGAGACAGCACGTGCTCATTACTAAACAAGGATACTATGCTATA +
Preference number: 5 (lower is better)
Translates to: KARSSKFIWGVYFKA*RQHVLITKQGYYAI
Trigger: TATAGCATAGTATCCTTGTTTAGTAATGAGCACGTGCTGTCTGCAGGCTTTGAAATAGACACCCCAGATAAATTTGGAAGAACGTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424317.5
ENST00000477852.1
CDS-3UTR CAA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACGGAGTCAGCCACATGTaGTCCTTGGCATTTACACGA +
Preference number: 5 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNGVSHM*SLAFTR
Trigger: TCGTGTAAATGCCAAGGACAACATGTGGCTGACTCC...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTTTGATATTTGCCCCTTaGGCCAAGAGTAAATTGACC +
Preference number: 5 (lower is better)
Translates to: LNLDKWELSTARKNLFGSLIFAP*AKSKLT
Trigger: GGTCAATTTACTCTTGGCCAAAGGGGCAAATATCAA...ACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp TATAGATCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTCTTGTCAAATGCATaGATATTTGCCCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: YRSTLTWINGNYLLHGRIFLSNA*IFAPLA
Trigger: GGCCAAAGGGGCAAATATCAATGCATTTGACAAGAA...GATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGATCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTGCACGCCGGTCCTTCTaGTCAAATGCATTGATATTT +
Preference number: 5 (lower is better)
Translates to: FQGGNGTHYKTSESTALIARRSF*SNALIF
Trigger: AAATATCAATGCATTTGACAAGAAGGACCGGCGTGC...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TCCACCTTAACCTGGATAAATGGGAACTATCTACTGCACGGAAGAATCTTTTTGAGGTTCAGGAGATGCTaGACAACATTAATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: STLTWINGNYLLHGRIFLRFRRC*TTLICP
Trigger: TGGACAGATTAATGTTGTCAAGCATCTCCTGAACCT...CAAAAAGATTCTTCCGTGCAGTAGATAGTTCCCATTTATCCAGGTTAAGGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGAGGTTCAGGAGATGCTaGACAACATTAATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTRFRRC*TTLICP
Trigger: TGGACAGATTAATGTTGTCAAGCATCTCCTGAACCT...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CAAGATTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAAAGCATCAGTGGTGTTaGTCCTTTGGCATCTTTCAC +
Preference number: 5 (lower is better)
Translates to: QDFHSLLEKDTAAYCASSKHQWC*SFGIFH
Trigger: GTGAAAGATGCCAAAGGACAAACACCACTGATGCTT...TGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAATCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ATTTCGTTCCTTTGTCCTCCTTCTATGAGTAAGAGAGTGGGAAAAGTCAAAACGTCAACAGTGTCTACGTaGGCTTCCTTTTCAAGTAAC +
Preference number: 5 (lower is better)
Translates to: ISFLCPPSMSKRVGKVKTSTVST*ASFSSN
Trigger: GTTACTTGAAAAGGAAGCCAACGTAGACACTGTTGA...CGTTTTGACTTTTCCCACTCTCTTACTCATAGAAGGAGGACAAAGGAACGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp GAATTTCCAGTATCTTGTTCCCAGTTGGAAAATAAAGGGTGCGTGCTTCCCAATCTCTCGTCTTGTATCTaGTCAAGTATTAACAAGGCA +
Preference number: 5 (lower is better)
Translates to: EFPVSCSQLENKGCVLPNLSSCI*SSINKA
Trigger: TGCCTTGTTAATACTTGACAAGATACAAGACGAGAG...ATTGGGAAGCACGCACCCTTTATTTTCCAACTGGGAACAAGATACTGGAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAATTTTTATTTCTCCTTTaGGCACATGTGCCCACACAC +
Preference number: 5 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEFLFLL*AHVPTH
Trigger: GTGTGTGGGCACATGTGCCAAAAGGAGAAATAAAAA...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACACACTGGCACCAGATTaGTATCATCGTGCTTTACAA +
Preference number: 5 (lower is better)
Translates to: GGNGTHYKTSESTALIRHTLAPD*YHRALQ
Trigger: TTGTAAAGCACGATGATACAAATCTGGTGCCAGTGT...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTTGGACACCTTTACCTTaGGCTTCTAGTGAGGAAGTA +
Preference number: 5 (lower is better)
Translates to: FQGGNGTHYKTSESTALIWTPLP*ASSEEV
Trigger: TACTTCCTCACTAGAAGCCAAAGGTAAAGGTGTCCA...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS GCA 90 bp ACTAAGCTGTCACCTAGCAAGTATATATTAAAATTTCCAGATAGTTaGCAAAGAGGAAAAGCTGACACCAATAACGGCCAAAGACACCTG +
Preference number: 5 (lower is better)
Translates to: TKLSPSKYILKFPDS*QRGKADTNNGQRHL
Trigger: CAGGTGTCTTTGGCCGTTATTGGTGTCAGCTTTTCCTCTTTGGCAACTATCTGGAAATTTTAATATATACTTGCTAGGTGACAGCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS-3UTR CAA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACACATTAATCTGTCCATaGGAGGCTGCAGCATGCAGA +
Preference number: 5 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNTLICP*EAAACR
Trigger: TCTGCATGCTGCAGCCTCCAATGGACAGATTAATGT...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TGTCTTAAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGGGGGTCCTCCCACACTaGTCCTTTTTATGGAAATCT +
Preference number: 5 (lower is better)
Translates to: CLKYILEGRLIICSDSRKGVLPH*SFLWKS
Trigger: AGATTTCCATAAAAAGGACAAGTGTGGGAGGACCCC...CTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTTAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTTCTGTTTCATTAACGTaGGCCCCTGTGGTCACTAAT +
Preference number: 5 (lower is better)
Translates to: QPTQHISTPSCSTVQRITSVSLT*APVVTN
Trigger: ATTAGTGACCACAGGGGCCAACGTTAATGAAACAGA...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TGGGAGAAAGAGAAAGAGAGGAAGAGAGAGAGAGAGAGATCAGTTGATGTAATGGGATTACCGATAAATTaGCGAAAACATTTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: WEKEKERKRERERSVDVMGLPIN*RKHFCS
Trigger: GGAGCAAAAATGTTTTCGCAAATTTATCGGTAATCC...CATTACATCAACTGATCTCTCTCTCTCTCTCTTCCTCTCTTTCTCTTTCTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TCAGCACATCATCAGTTACAAATGTTAAGTGGTCAACTAGAAATCTGTGTCCTAGTCTCATTCTTCTTTTaGTACAGCGGTTCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: SAHHQLQMLSGQLEICVLVSFFF*YSGSRC
Trigger: ACACCTGGAACCGCTGTACAAAAAGAAGAATGAGAC...TAGGACACAGATTTCTAGTTGACCACTTAACATTTGTAACTGATGATGTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCAAGACACCGCAGCATATaGTGCTTCTTCAACACTGAA +
Preference number: 5 (lower is better)
Translates to: TQHISTPSCSTVQRITSARHRSI*CFFNTE
Trigger: TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCT...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CAACCAACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGACACCGCAGCATATaGTGCTTCTTCAACACTGAA +
Preference number: 5 (lower is better)
Translates to: QPTQHISTPSCSTVQRITRHRSI*CFFNTE
Trigger: TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCT...AGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTACACTGGCACCAGATTaGTATCATCGTGCTTTACAA +
Preference number: 5 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTTLAPD*YHRALQ
Trigger: TTGTAAAGCACGATGATACAAATCTGGTGCCAGTGT...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp GAAGAATCTTTTTGGCAGTATTCCCACTTGAGGCAATTATTCCACCGTATTTTTCACGGAAGAATCTTTTaGGCAGTATTCCCACTTGAG +
Preference number: 5 (lower is better)
Translates to: EESFWQYSHLRQLFHRIFHGRIF*AVFPLE
Trigger: CTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTG...AAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS-3UTR CAA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCATTGATATTTGCCCCTTaGGCCAAGAGTAAATTGACC +
Preference number: 5 (lower is better)
Translates to: TQHISTPSCSTVQRITSALIFAP*AKSKLT
Trigger: GGTCAATTTACTCTTGGCCAAAGGGGCAAATATCAA...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACGCACGCCGGTCCTTCTaGTCAAATGCATTGATATTT +
Preference number: 5 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNARRSF*SNALIF
Trigger: AAATATCAATGCATTTGACAAGAAGGACCGGCGTGC...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AGGAGCATTTCTTATATGGGATCTAAACACAAAGCCATATTTGCTAATAGGTCTGCACGCCGGTCCTTCTaGTCAAATGCATTGATATTT +
Preference number: 5 (lower is better)
Translates to: RSISYMGSKHKAIFANRSARRSF*SNALIF
Trigger: AAATATCAATGCATTTGACAAGAAGGACCGGCGTGC...AGACCTATTAGCAAATATGGCTTTGTGTTTAGATCCCATATAAGAAATGCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp GGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTCGACACTTAACATCTGCCCCGTaGTTTACTAACAATTCAAGA +
Preference number: 5 (lower is better)
Translates to: GGNGTHYKTSESTALIRHLTSAP*FTNNSR
Trigger: TCTTGAATTGTTAGTAAACAACGGGGCAGATGTTAA...GTGTCGAATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAAAATCTTTACAGAGAATaGACACTTCTTGTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: PFTSRKRHRSILCFFNTENLYRE*TLLVPA
Trigger: TGCTGGAACAAGAAGTGTCAATTCTCTGTAAAGATT...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp CCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTGAATATAAGCACACCAAGTaGCTCAACAGTACAAAGAAT +
Preference number: 5 (lower is better)
Translates to: PFTSRKRHRSILCFFNTEYKHTK*LNSTKN
Trigger: ATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATA...TTCAGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS GCA 90 bp ACATCTCTTCTTGGAAGATTTCCTCTATTCAAGCAGGCAGTTAGTTaGTTTCTCCCGCAAGTCAATGATGATATTGTAATGATATGCTTT +
Preference number: 5 (lower is better)
Translates to: TSLLGRFPLFKQAVS*FLPQVNDDIVMICF
Trigger: AAAGCATATCATTACAATATCATCATTGACTTGCGGGAGAAAGCAACTAACTGCCTGCTTGAATAGAGGAAATCTTCCAAGAAGAGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS-3UTR CAA 90 bp TGTCTTAAGTATATTTTGGAAGGCAGGCTCATAATATGTAGTGACAGTAGAAAGTTGATATTTGCCCCTTaGGCCAAGAGTAAATTGACC +
Preference number: 5 (lower is better)
Translates to: CLKYILEGRLIICSDSRKLIFAP*AKSKLT
Trigger: GGTCAATTTACTCTTGGCCAAAGGGGCAAATATCAA...CTTTCTACTGTCACTACATATTATGAGCCTGCCTTCCAAAATATACTTAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409153.5
CDS-3UTR CAA 90 bp TTCCAGGGTGGAAATGGAACTCATTATAAAACGTCAGAGAGTACTGCTCTAATTTTAACATCTGCCCCGTaGTTTACTAACAATTCAAGA +
Preference number: 5 (lower is better)
Translates to: FQGGNGTHYKTSESTALILTSAP*FTNNSR
Trigger: TCTTGAATTGTTAGTAAACAACGGGGCAGATGTTAA...AATTAGAGCAGTACTCTCTGACGTTTTATAATGAGTTCCATTTCCACCCTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp ACACAACATATAAGCACACCAAGTTGCTCAACAGTACAAAGAATAACTAGTGCACTCTCGTCTTGTATCTaGTCAAGTATTAACAAGGCA +
Preference number: 5 (lower is better)
Translates to: TQHISTPSCSTVQRITSALSSCI*SSINKA
Trigger: TGCCTTGTTAATACTTGACAAGATACAAGACGAGAG...TGCACTAGTTATTCTTTGTACTGTTGAGCAACTTGGTGTGCTTATATGTTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp TTTCCATTCACTTCTAGAAAAAGACACCGCAGCATATTGTGCTTCTTCAACACTAATGTTAACGCTGCTTaGCCATTAAAGCAAGCATTT +
Preference number: 5 (lower is better)
Translates to: FPFTSRKRHRSILCFFNTNVNAA*PLKQAF
Trigger: AAATGCTTGCTTTAATGGCAAAGCAGCGTTAACATT...AGTGTTGAAGAAGCACAATATGCTGCGGTGTCTTTTTCTAGAAGTGAATGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS TCA 90 bp ATACTTACAGAATGCAGACTGGTTGTTGATGGAAAATGGATGTTTTaGGGATTGAAGTCTTTGAAGCTAGTTGAGCTAACAAAGATAGAG +
Preference number: 5 (lower is better)
Translates to: ILTECRLVVDGKWMF*GLKSLKLVELTKIE
Trigger: CTCTATCTTTGTTAGCTCAACTAGCTTCAAAGACTTCAATCCTCAAAACATCCATTTTCCATCAACAACCAGTCTGCATTCTGTAAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS TCA 90 bp GGATTCAAACACACTAAAGATACTTACAGAATGCAGACTGGTTGTTaGTGGAAAATGGATGTTTTGAGGATTGAAGTCTTTGAAGCTAGT +
Preference number: 5 (lower is better)
Translates to: GFKHTKDTYRMQTGC*WKMDVLRIEVFEAS
Trigger: ACTAGCTTCAAAGACTTCAATCCTCAAAACATCCATTTTCCATCAACAACCAGTCTGCATTCTGTAAGTATCTTTAGTGTGTTTGAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS-3UTR CAA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACAATCTTTACAGAGAATaGACACTTCTTGTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNNLYRE*TLLVPA
Trigger: TGCTGGAACAAGAAGTGTCAATTCTCTGTAAAGATT...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS-3UTR CAA 90 bp AAAAAGGCTTTACTTGGGGCGTTACCAATGATAGGAACACAATTTAACAATGAAAATCTTTACAGAGAATaGACACTTCTTGTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: KKALLGALPMIGTQFNNENLYRE*TLLVPA
Trigger: TGCTGGAACAAGAAGTGTCAATTCTCTGTAAAGATT...TTCATTGTTAAATTGTGTTCCTATCATTGGTAACGCCCCAAGTAAAGCCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS-3UTR CAA 90 bp CCTATGGTTTATAGTTTCGTAAGACGAAAGCATTTTAGCACTGCAAAATCAAACAATGTTAACGCTGCTTaGCCATTAAAGCAAGCATTT +
Preference number: 5 (lower is better)
Translates to: PMVYSFVRRKHFSTAKSNNVNAA*PLKQAF
Trigger: AAATGCTTGCTTTAATGGCAAAGCAGCGTTAACATT...GTTTGATTTTGCAGTGCTAAAATGCTTTCGTCTTACGAAACTATAAACCATAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282272.15
ENST00000647377.1
CDS GCA 72 bp CAGCTCGCTCAGCCACGTGGCGTGGCCACGAGCAGCTaGATAGTGCAAGGGCGTCCTCCCTCTGGAATCTTT +
Preference number: 6 (lower is better)
Translates to: QLAQPRGVATSS*IVQGRPPSGIF
Trigger: AAAGATTCCAGAGGGAGGACGCCCTTGCACTATGCAGCTGCTCGTGGCCACGCCACGTGGCTGAGCGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CCA 72 bp CATCCCAGCTGCTTCAGGCCTCTTTTGGTCTCTTACTaGCGCTCCTCCCTGAGACCTCTCCCCCTCAGCCCA +
Preference number: 6 (lower is better)
Translates to: HPSCFRPLLVSY*RSSLRPLPLSP
Trigger: TGGGCTGAGGGGGAGAGGTCTCAGGGAGGAGCGCCAGTAAGAGACCAAAAGAGGCCTGAAGCAGCTGGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 90 bp ATGGACTCAGCTTTATGCCCTCATCCCAGCTGCTTCAGGCCTCTTTaGGTCTCTTACTGGCGCTCCTCCCTGAGACCTCTCCCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: MDSALCPHPSCFRPL*VSYWRSSLRPLPLS
Trigger: GCTGAGGGGGAGAGGTCTCAGGGAGGAGCGCCAGTAAGAGACCAAAAGAGGCCTGAAGCAGCTGGGATGAGGGCATAAAGCTGAGTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS GCA 72 bp CTGAACCAATGGTGGCTGGTCGGTGAGTTTGAGCACTaGCATTCTTCCGCTCCTTCGCGCGCACACACATGC +
Preference number: 6 (lower is better)
Translates to: LNQWWLVGEFEH*HSSAPSRAHTC
Trigger: GCATGTGTGTGCGCGCGAAGGAGCGGAAGAATGGCAGTGCTCAAACTCACCGACCAGCCACCATTGGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282272.15
ENST00000409153.5
ENST00000409919.5
ENST00000447713.1
ENST00000463879.1
ENST00000647377.1
CDS GCA 72 bp TGGCCAGCAACTCCTCAACTACCACCTTTAAGCCATTaGGCGCAGCGACGTGGAGGGGTGTCTGCAGTGCAT +
Preference number: 6 (lower is better)
Translates to: WPATPQLPPLSH*AQRRGGVSAVH
Trigger: ATGCACTGCAGACACCCCTCCACGTCGCTGCGCGCAATGGCTTAAAGGTGGTAGTTGAGGAGTTGCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282272.15
ENST00000424317.5
ENST00000647377.1
CDS CAA 90 bp GCCTTGGTTATCTTTGAAACAACAGTCCTCCTCAGAAAGAGCCATTaGGAGCAGCTCGCTCAGCCACGTGGCGTGGCCACGAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: ALVIFETTVLLRKSH*EQLAQPRGVATSSC
Trigger: GCAGCTGCTCGTGGCCACGCCACGTGGCTGAGCGAGCTGCTCCAAATGGCTCTTTCTGAGGAGGACTGTTGTTTCAAAGATAACCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS TCA 72 bp CAGCCAGATCCAGAGCAGTGCGGCCTTTCTCATCCCTaGTGTCCAGGTCCACCAACGACTGCAGAAGGACTT +
Preference number: 6 (lower is better)
Translates to: QPDPEQCGLSHP*CPGPPTTAEGL
Trigger: AAGTCCTTCTGCAGTCGTTGGTGGACCTGGACATCAGGGATGAGAAAGGCCGCACTGCTCTGGATCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000422886.5
ENST00000424317.5
ENST00000647377.1
CDS GCA 72 bp GAGCATCCGGATCTCCTCTGGATCACCGCTGAAGATTaGCTGAACCAATGGTGGCTGGTCGGTGAGTTTGAG +
Preference number: 6 (lower is better)
Translates to: EHPDLLWITAED*LNQWWLVGEFE
Trigger: CTCAAACTCACCGACCAGCCACCATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282272.15
ENST00000409153.5
ENST00000409919.5
ENST00000447713.1
ENST00000463879.1
ENST00000647377.1
CDS TCA 72 bp ATCCGGATCTCCTCTGGATCACCGCTGAAGATTGCCTaGACCAATGGTGGCTGGTCGGTGAGTTTGAGCACT +
Preference number: 6 (lower is better)
Translates to: IRISSGSPLKIA*TNGGWSVSLST
Trigger: AGTGCTCAAACTCACCGACCAGCCACCATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGGAGATCCGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282272.15
ENST00000409153.5
ENST00000409919.5
ENST00000447713.1
ENST00000463879.1
ENST00000647377.1
CDS GCA 72 bp GAGCATCCGGATCTCCTCTGGATCACCGCTGAAGATTaGCTGAACCAATGGTGGATGCCGTCCACTTTAACC +
Preference number: 6 (lower is better)
Translates to: EHPDLLWITAED*LNQWWMPSTLT
Trigger: GGTTAAAGTGGACGGCATCCACCATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443014.1
CDS GCA 72 bp GACCAGGCTTCAAGGCTGACATTCACCAGGGTTCCCTaGCACCCCTGCCTTCACATTGATCTTCTCATCCTT +
Preference number: 6 (lower is better)
Translates to: DQASRLTFTRVP*HPCLHIDLLIL
Trigger: AAGGATGAGAAGATCAATGTGAAGGCAGGGGTGGCAGGGAACCCTGGTGAATGTCAGCCTTGAAGCCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS GCA 72 bp CAAATCATGGACTCAGCTTTATGCCCTCATCCCAGCTaGTTCAGGCCTCTTTTGGTCTCTTACTGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: QIMDSALCPHPS*FRPLLVSYWRS
Trigger: GGAGCGCCAGTAAGAGACCAAAAGAGGCCTGAAGCAGCTGGGATGAGGGCATAAAGCTGAGTCCATGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CCA 72 bp TGCTTCTTCACTTCTGGAAGCAACAGCCCGGTGCAGTaGAGTCAGCCACATGTTGTCCTTGGCATTTACACG +
Preference number: 6 (lower is better)
Translates to: CFFTSGSNSPVQ*SQPHVVLGIYT
Trigger: CGTGTAAATGCCAAGGACAACATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000443014.1
ENST00000447713.1
ENST00000647377.1
CDS CCA 72 bp ACTCACTTCACTTCTGGAAGCAACAGCCCGGTGCAGTaGAGTCAGCCACATGTTGTCCTTGGCATTTACACG +
Preference number: 6 (lower is better)
Translates to: THFTSGSNSPVQ*SQPHVVLGIYT
Trigger: CGTGTAAATGCCAAGGACAACATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 72 bp ACAGCCCGGTGCAGTGGAGTCAGCCACATGTTGTCCTaGGCATTTACACGAGCTCCTGACAAAATCAGGAGT +
Preference number: 6 (lower is better)
Translates to: TARCSGVSHMLS*AFTRAPDKIRS
Trigger: ACTCCTGATTTTGTCAGGAGCTCGTGTAAATGCCAAGGACAACATGTGGCTGACTCCACTGCACCGGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000443014.1
ENST00000463879.1
ENST00000647377.1
CDS CAA 90 bp GGAGGTCAGTCATCCAGCACCAAGTGCATGCAAGGTTTGAACCTCTaGTATCCCTGGATAATGGGCATCTCCTCTGACCAGGCTTCAAGG +
Preference number: 6 (lower is better)
Translates to: GGQSSSTKCMQGLNL*YPWIMGISSDQASR
Trigger: CCTTGAAGCCTGGTCAGAGGAGATGCCCATTATCCAGGGATACAAGAGGTTCAAACCTTGCATGCACTTGGTGCTGGATGACTGACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 90 bp TCACTTCTGGAAGCAACAGCCCGGTGCAGTGGAGTCAGCCACATGTaGTCCTTGGCATTTACACGAGCTCCTGACAAAATCAGGAGTTCA +
Preference number: 6 (lower is better)
Translates to: SLLEATARCSGVSHM*SLAFTRAPDKIRSS
Trigger: TGAACTCCTGATTTTGTCAGGAGCTCGTGTAAATGCCAAGGACAACATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000443014.1
ENST00000463879.1
ENST00000647377.1
CDS CAA 72 bp GGAGGTCAGTCATCCAGCACCAAGTGCATGCAAGGTTaGAACCTCTTGTATCCCTGGATAATGGGCATCTCC +
Preference number: 6 (lower is better)
Translates to: GGQSSSTKCMQG*NLLYPWIMGIS
Trigger: GGAGATGCCCATTATCCAGGGATACAAGAGGTTCAAACCTTGCATGCACTTGGTGCTGGATGACTGACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 90 bp TTCAGCTATGGAGGTCAGTCATCCAGCACCAAGTGCATGCAAGGTTaGAACCTCTTGTATCCCTGGATAATGGGCATCTCCTCTGACCAG +
Preference number: 6 (lower is better)
Translates to: FSYGGQSSSTKCMQG*NLLYPWIMGISSDQ
Trigger: CTGGTCAGAGGAGATGCCCATTATCCAGGGATACAAGAGGTTCAAACCTTGCATGCACTTGGTGCTGGATGACTGACCTCCATAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS TCA 72 bp CATGAAGGGGTGTCCTGCCTTTGTCATCTCTACAACTaGCGATACTGGAATCTATGGCCCCAAGCAGCAATG +
Preference number: 6 (lower is better)
Translates to: HEGVSCLCHLYN*RYWNLWPQAAM
Trigger: CATTGCTGCTTGGGGCCATAGATTCCAGTATCGTCAGTTGTAGAGATGACAAAGGCAGGACACCCCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS GCA 72 bp CATGACCGTATCTTGCAGCCACATGGAGAGGAGTGTTaGCGTCCTTATCCACACAGTCAATTTCACCTCCAT +
Preference number: 6 (lower is better)
Translates to: HDRILQPHGEEC*RPYPHSQFHLH
Trigger: ATGGAGGTGAAATTGACTGTGTGGATAAGGACGGCAACACTCCTCTCCATGTGGCTGCAAGATACGGTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000422886.5
ENST00000424317.5
ENST00000473081.1
ENST00000647377.1
CDS CCA 72 bp CACGAGCAGCTGCATAGTGCAAGGGCGTCCTCCCTCTaGAATCTTTACAGAGAATTGACACTTCTTGTTCCA +
Preference number: 6 (lower is better)
Translates to: HEQLHSARASSL*NLYRELTLLVP
Trigger: TGGAACAAGAAGTGTCAATTCTCTGTAAAGATTCCAGAGGGAGGACGCCCTTGCACTATGCAGCTGCTCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CCA 72 bp CTCCATTGCTCAGAGGATTCCAAGCCCTCTGCCATCTaGCCCAACCTCCACTATCAGATTTACCTTCTACTA +
Preference number: 6 (lower is better)
Translates to: LHCSEDSKPSAI*PNLHYQIYLLL
Trigger: TAGTAGAAGGTAAATCTGATAGTGGAGGTTGGGCCAGATGGCAGAGGGCTTGGAATCCTCTGAGCAATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CCA 72 bp ACCAAGTGCATGCAAGGTTTGAACCTCTTGTATCCCTaGATAATGGGCATCTCCTCTGACCAGGCTTCAAGG +
Preference number: 6 (lower is better)
Translates to: TKCMQGLNLLYP*IMGISSDQASR
Trigger: CCTTGAAGCCTGGTCAGAGGAGATGCCCATTATCCAGGGATACAAGAGGTTCAAACCTTGCATGCACTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 72 bp TGTCCTTTGGCATCTTTCACATCGACCGCCTCCGGGTaGTCTGCAATTTCTAGCAACAGCCGTAAACACAGT +
Preference number: 6 (lower is better)
Translates to: CPLASFTSTASG*SAISSNSRKHS
Trigger: ACTGTGTTTACGGCTGTTGCTAGAAATTGCAGACAACCCGGAGGCGGTCGATGTGAAAGATGCCAAAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CAA 90 bp CTGCATAGTGCAAGGGCGTCCTCCCTCTGGAATCTTTACAGAGAATaGACACTTCTTGTTCCAGCAGCATTTGCACACATTCCTCGTGTC +
Preference number: 6 (lower is better)
Translates to: LHSARASSLWNLYRE*TLLVPAAFAHIPRV
Trigger: GACACGAGGAATGTGTGCAAATGCTGCTGGAACAAGAAGTGTCAATTCTCTGTAAAGATTCCAGAGGGAGGACGCCCTTGCACTATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CAA 90 bp ACCTGGAGAACATCACCTTCTCCAGTAGCAGAGGAGAAGCTGCATTaGGTAAATTCAGCTATGGAGGTCAGTCATCCAGCACCAAGTGCA +
Preference number: 6 (lower is better)
Translates to: TWRTSPSPVAEEKLH*VNSAMEVSHPAPSA
Trigger: TGCACTTGGTGCTGGATGACTGACCTCCATAGCTGAATTTACCAAATGCAGCTTCTCCTCTGCTACTGGAGAAGGTGATGTTCTCCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 90 bp TCCGAATCAGAATCATTTTCATTGTACCCATCCTCCGAGCCTACGTaGTTACTGCACAGGCTAACCATGCTACCCAGATTGGAGAGGGTC +
Preference number: 6 (lower is better)
Translates to: SESESFSLYPSSEPT*LLHRLTMLPRLERV
Trigger: GACCCTCTCCAATCTGGGTAGCATGGTTAGCCTGTGCAGTAACAACGTAGGCTCGGAGGATGGGTACAATGAAAATGATTCTGATTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS TCA 72 bp ACAGTCAATTTCACCTCCATTCTGAATGAGGGTCTGTaGCCGTGTGAACCTTCCATGGACAGCTGTCATGTG +
Preference number: 6 (lower is better)
Translates to: TVNFTSILNEGL*PCEPSMDSCHV
Trigger: CACATGACAGCTGTCCATGGAAGGTTCACACGGTCACAGACCCTCATTCAGAATGGAGGTGAAATTGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000422886.5
ENST00000424317.5
ENST00000473081.1
ENST00000647377.1
CDS GCA 72 bp GTATTCCCACTTGAGGCAATTATTCCACCGTATTTTTaGGGTAACCTACTTGGCTGTGTCAGCTCCGCTGGT +
Preference number: 6 (lower is better)
Translates to: VFPLEAIIPPYF*GNLLGCVSSAG
Trigger: ACCAGCGGAGCTGACACAGCCAAGTAGGTTACCGCAAAAATACGGTGGAATAATTGCCTCAAGTGGGAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS CCA 72 bp ATCTTCAGTTTTATGGATGAGCATCCGGATCTCCTCTaGATCACCGCTGAAGATTGCCTGAACCAATGGTGG +
Preference number: 6 (lower is better)
Translates to: IFSFMDEHPDLL*ITAEDCLNQWW
Trigger: CCACCATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGGAGATCCGGATGCTCATCCATAAAACTGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000443014.1
ENST00000447713.1
ENST00000463879.1
ENST00000647377.1
CDS CCA 72 bp TACACGAGCTCCAGAGTATTCACATCTTCAGTTTTATaGATGAGCATCCGGATCTCCTCTGGATCACCGCTG +
Preference number: 6 (lower is better)
Translates to: YTSSRVFTSSVL*MSIRISSGSPL
Trigger: CAGCGGTGATCCAGAGGAGATCCGGATGCTCATCCATAAAACTGAAGATGTGAATACTCTGGAGCTCGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447713.1
CDS TCA 72 bp TCAATGATCTCTGCATCTCCCAGAAATGCGGCCACATaGAGAGGGGTTCGTTTCTCAGAATCCAGAGTATTC +
Preference number: 6 (lower is better)
Translates to: SMISASPRNAAT*RGVRFSESRVF
Trigger: GAATACTCTGGATTCTGAGAAACGAACCCCTCTTCATGTGGCCGCATTTCTGGGAGATGCAGAGATCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000443014.1
ENST00000463879.1
ENST00000647377.1
CDS TCA 72 bp CAAGGGCGTCCTCCCTCTGGAATCTTTACAGAGAATTaGCACTTCTTGTTCCAGCAGCATTTGCACACATTC +
Preference number: 6 (lower is better)
Translates to: QGRPPSGIFTEN*HFLFQQHLHTF
Trigger: GAATGTGTGCAAATGCTGCTGGAACAAGAAGTGTCAATTCTCTGTAAAGATTCCAGAGGGAGGACGCCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CAA 72 bp ATTTCATCAATCTCCACCCCCAGGTTCAGGAGATGCTaGACAACATTAATCTGTCCATTGGAGGCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: ISSISTPRFRRC*TTLICPLEAAA
Trigger: TGCTGCAGCCTCCAATGGACAGATTAATGTTGTCAAGCATCTCCTGAACCTGGGGGTGGAGATTGATGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000424317.5
ENST00000647377.1
CDS CAA 72 bp GCAAGGGCGTCCTCCCTCTGGAATCTTTACAGAGAATaGACACTTCTTGTTCCAGCAGCATTTGCACACATT +
Preference number: 6 (lower is better)
Translates to: ARASSLWNLYRE*TLLVPAAFAHI
Trigger: AATGTGTGCAAATGCTGCTGGAACAAGAAGTGTCAATTCTCTGTAAAGATTCCAGAGGGAGGACGCCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CAA 72 bp CCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTaGGATCTTGAATGGTTAACAGCCATTTTCATCTAC +
Preference number: 6 (lower is better)
Translates to: PSGCLFCSQPMF*DLEWLTAIFIY
Trigger: GTAGATGAAAATGGCTGTTAACCATTCAAGATCCAAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS CAA 72 bp CTTTCTGCTTTGCCTCCTCCCCAGGCTGAGAACTCATaGAAATTCAGGATCATGCTGTCCATGTTGAACTAC +
Preference number: 6 (lower is better)
Translates to: LSALPPPQAENS*KFRIMLSMLNY
Trigger: GTAGTTCAACATGGACAGCATGATCCTGAATTTCAATGAGTTCTCAGCCTGGGGAGGAGGCAAAGCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 72 bp GAATCATTTTCATTGTACCCATCCTCCGAGCCTACGTaGTTACTGCACAGGCTAACCATGCTACCCAGATTG +
Preference number: 6 (lower is better)
Translates to: ESFSLYPSSEPT*LLHRLTMLPRL
Trigger: CAATCTGGGTAGCATGGTTAGCCTGTGCAGTAACAACGTAGGCTCGGAGGATGGGTACAATGAAAATGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS CAA 90 bp AATGATATGCTTTCTGCTTTGCCTCCTCCCCAGGCTGAGAACTCATaGAAATTCAGGATCATGCTGTCCATGTTGAACTACCCCAGATAC +
Preference number: 6 (lower is better)
Translates to: NDMLSALPPPQAENS*KFRIMLSMLNYPRY
Trigger: GTATCTGGGGTAGTTCAACATGGACAGCATGATCCTGAATTTCAATGAGTTCTCAGCCTGGGGAGGAGGCAAAGCAGAAAGCATATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 90 bp AGAGGGAGCTGGTTACTTGGAGAAGCAACAAAAGCCTTTCTCAGATaGGAAGGTCAGTCCATCATTAGGCTGACTGGATTCAAACACACT +
Preference number: 6 (lower is better)
Translates to: RGSWLLGEATKAFLR*EGQSIIRLTGFKHT
Trigger: AGTGTGTTTGAATCCAGTCAGCCTAATGATGGACTGACCTTCCAATCTGAGAAAGGCTTTTGTTGCTTCTCCAAGTAACCAGCTCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS GCA 72 bp GAGATGCTTGACAACATTAATCTGTCCATTGGAGGCTaGAGCATGCAGAGGGGTATAACCCTTCTTATCCTT +
Preference number: 6 (lower is better)
Translates to: EMLDNINLSIGG*SMQRGITLLIL
Trigger: AAGGATAAGAAGGGTTATACCCCTCTGCATGCTGCAGCCTCCAATGGACAGATTAATGTTGTCAAGCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000647377.1
CDS GCA 72 bp TTGATTTCATCAATCTCCACCCCCAGGTTCAGGAGATaGTTGACAACATTAATCTGTCCATTGGAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: LISSISTPRFRR*LTTLICPLEAA
Trigger: TGCAGCCTCCAATGGACAGATTAATGTTGTCAAGCATCTCCTGAACCTGGGGGTGGAGATTGATGAAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000424317.5
ENST00000647377.1
CDS GCA 72 bp AAATTCAGCTATGGAGGTCAGTCATCCAGCACCAAGTaGATGCAAGGTTTGAACCTCTTGTATCCCTGGATA +
Preference number: 6 (lower is better)
Translates to: KFSYGGQSSSTK*MQGLNLLYPWI
Trigger: TATCCAGGGATACAAGAGGTTCAAACCTTGCATGCACTTGGTGCTGGATGACTGACCTCCATAGCTGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 72 bp AATTCTCCAGGGTCTGAGCCAGGCAATTTAGGATTATaGACCTCTCTCATTCCATGCGGGATATTTGGAAGG +
Preference number: 6 (lower is better)
Translates to: NSPGSEPGNLGL*TSLIPCGIFGR
Trigger: CCTTCCAAATATCCCGCATGGAATGAGAGAGGTCAATAATCCTAAATTGCCTGGCTCAGACCCTGGAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 90 bp TCCCACTTGAGGCAATTATTCCACCGTATTTTTGCGGTAACCTACTaGGCTGTGTCAGCTCCGCTGGTTATTAAGGTGTTAATCAAAAGC +
Preference number: 6 (lower is better)
Translates to: SHLRQLFHRIFAVTY*AVSAPLVIKVLIKS
Trigger: GCTTTTGATTAACACCTTAATAACCAGCGGAGCTGACACAGCCAAGTAGGTTACCGCAAAAATACGGTGGAATAATTGCCTCAAGTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS CAA 90 bp ATAATTGGTCCCTCAGGGTGCCTGTTTTGCAGCCAACCGATGTTCTaGGATCTTGAATGGTTAACAGCCATTTTCATCTACAGCAAGTAC +
Preference number: 6 (lower is better)
Translates to: IIGPSGCLFCSQPMF*DLEWLTAIFIYSKY
Trigger: GTACTTGCTGTAGATGAAAATGGCTGTTAACCATTCAAGATCCAAGAACATCGGTTGGCTGCAAAACAGGCACCCTGAGGGACCAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS CAA 90 bp TCTACAGTCCAAAGTCAAAACGTTTCCGAATCAGAATCATTTTCATaGTACCCATCCTCCGAGCCTACGTTGTTACTGCACAGGCTAACC +
Preference number: 6 (lower is better)
Translates to: STVQSQNVSESESFS*YPSSEPTLLLHRLT
Trigger: GGTTAGCCTGTGCAGTAACAACGTAGGCTCGGAGGATGGGTACAATGAAAATGATTCTGATTCGGAAACGTTTTGACTTTGGACTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS TCA 72 bp TTTATACATTCCACATTACCTCCTGCAGCAGCAGCATaGAGGCACGTTCTTCCAAATTTATCTGGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: FIHSTLPPAAAA*RHVLPNLSGVS
Trigger: AGACACCCCAGATAAATTTGGAAGAACGTGCCTTCATGCTGCTGCTGCAGGAGGTAATGTGGAATGTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000424317.5
ENST00000477852.1
ENST00000647377.1
CDS GCA 72 bp AGGGGTATAACCCTTCTTATCCTTACAGGTCACTTCTaGGCCATGGTTAATGAGCAATGCTACAACATCCAA +
Preference number: 6 (lower is better)
Translates to: RGITLLILTGHF*AMVNEQCYNIQ
Trigger: TTGGATGTTGTAGCATTGCTCATTAACCATGGCGCAGAAGTGACCTGTAAGGATAAGAAGGGTTATACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000409919.5
ENST00000647377.1
CDS GCA 72 bp GGGTGTCTATTTCAAAGCCCGATGATAACAACTTTCTaGAGCAGTCAGAGTGAGCATTTAGGGCAGCTAAAT +
Preference number: 6 (lower is better)
Translates to: GCLFQSPMITTF*SSQSEHLGQLN
Trigger: ATTTAGCTGCCCTAAATGCTCACTCTGACTGCTGCAGAAAGTTGTTATCATCGGGCTTTGAAATAGACACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000422886.5
ENST00000473081.1
ENST00000647377.1
CDS GCA 72 bp TTACAGAGAATTGACACTTCTTGTTCCAGCAGCATTTaGACACATTCCTCGTGTCCTGTCATAATCCCTCTG +
Preference number: 6 (lower is better)
Translates to: LQRIDTSCSSSI*THSSCPVIIPL
Trigger: CAGAGGGATTATGACAGGACACGAGGAATGTGTGCAAATGCTGCTGGAACAAGAAGTGTCAATTCTCTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS GCA 72 bp TTTCTCCCGCAAGTCAATGATGATATTGTAATGATATaGTTTCTGCTTTGCCTCCTCCCCAGGCTGAGAACT +
Preference number: 6 (lower is better)
Translates to: FLPQVNDDIVMI*FLLCLLPRLRT
Trigger: AGTTCTCAGCCTGGGGAGGAGGCAAAGCAGAAAGCATATCATTACAATATCATCATTGACTTGCGGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 72 bp AGGCAATTATTCCACCGTATTTTTGCGGTAACCTACTaGGCTGTGTCAGCTCCGCTGGTTATTAAGGTGTTA +
Preference number: 6 (lower is better)
Translates to: RQLFHRIFAVTY*AVSAPLVIKVL
Trigger: TAACACCTTAATAACCAGCGGAGCTGACACAGCCAAGTAGGTTACCGCAAAAATACGGTGGAATAATTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS CAA 72 bp TGGTTACTTGGAGAAGCAACAAAAGCCTTTCTCAGATaGGAAGGTCAGTCCATCATTAGGCTGACTGGATTC +
Preference number: 6 (lower is better)
Translates to: WLLGEATKAFLR*EGQSIIRLTGF
Trigger: GAATCCAGTCAGCCTAATGATGGACTGACCTTCCAATCTGAGAAAGGCTTTTGTTGCTTCTCCAAGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 90 bp CCTCTGTGTAAAGCTGTGCATCCTAGGATGTCAACAGTGTCTACGTaGGCTTCCTTTTCAAGTAACAATGAAACAGCGTCAATATGTCCA +
Preference number: 6 (lower is better)
Translates to: PLCKAVHPRMSTVST*ASFSSNNETASICP
Trigger: TGGACATATTGACGCTGTTTCATTGTTACTTGAAAAGGAAGCCAACGTAGACACTGTTGACATCCTAGGATGCACAGCTTTACACAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CAA 90 bp GGAACTATCTACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTaGAGGCAATTATTCCACCGTATTTTTGCGGTAACCTACTTGGCT +
Preference number: 6 (lower is better)
Translates to: GTIYCTEESFWQYSH*RQLFHRIFAVTYLA
Trigger: AGCCAAGTAGGTTACCGCAAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTAGATAGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS CAA 90 bp AAGATTCTGAATTCTCCAGGGTCTGAGCCAGGCAATTTAGGATTATaGACCTCTCTCATTCCATGCGGGATATTTGGAAGGAGAACACAA +
Preference number: 6 (lower is better)
Translates to: KILNSPGSEPGNLGL*TSLIPCGIFGRRTQ
Trigger: TTGTGTTCTCCTTCCAAATATCCCGCATGGAATGAGAGAGGTCAATAATCCTAAATTGCCTGGCTCAGACCCTGGAGAATTCAGAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS TCA 72 bp ACTGACGATACTGGAATCTATGGCCCCAAGCAGCAATaGTGCACAATTCCCATGATCATTGATTATTGCACA +
Preference number: 6 (lower is better)
Translates to: TDDTGIYGPKQQ*CTIPMIIDYCT
Trigger: TGTGCAATAATCAATGATCATGGGAATTGTGCATCATTGCTGCTTGGGGCCATAGATTCCAGTATCGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS GCA 72 bp CACTTGTCCTTTTTATGGAAATCTGCTCCGCTGCTCTaGAAGAGTTTTATACATTCCACATTACCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: HLSFLWKSAPLL*KSFIHSTLPPA
Trigger: TGCAGGAGGTAATGTGGAATGTATAAAACTCTTGCAGAGCAGCGGAGCAGATTTCCATAAAAAGGACAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000409153.5
ENST00000424317.5
ENST00000477852.1
ENST00000647377.1
CDS CCA 72 bp AAGCTGTGCATCCTAGGATGTCAACAGTGTCTACGTTaGCTTCCTTTTCAAGTAACAATGAAACAGCGTCAA +
Preference number: 6 (lower is better)
Translates to: KLCILGCQQCLR*LPFQVTMKQRQ
Trigger: TTGACGCTGTTTCATTGTTACTTGAAAAGGAAGCCAACGTAGACACTGTTGACATCCTAGGATGCACAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CAA 72 bp AAAGCTGTGCATCCTAGGATGTCAACAGTGTCTACGTaGGCTTCCTTTTCAAGTAACAATGAAACAGCGTCA +
Preference number: 6 (lower is better)
Translates to: KAVHPRMSTVST*ASFSSNNETAS
Trigger: TGACGCTGTTTCATTGTTACTTGAAAAGGAAGCCAACGTAGACACTGTTGACATCCTAGGATGCACAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS CAA 72 bp TACTGCACGGAAGAATCTTTTTGGCAGTATTCCCACTaGAGGCAATTATTCCACCGTATTTTTGCGGTAACC +
Preference number: 6 (lower is better)
Translates to: YCTEESFWQYSH*RQLFHRIFAVT
Trigger: GGTTACCGCAAAAATACGGTGGAATAATTGCCTCAAGTGGGAATACTGCCAAAAAGATTCTTCCGTGCAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409919.5
CDS CAA 72 bp CTGCAACTTCTGTATATTAATTCTCAGCAAGACCTTTaGCTCCTAGGTGTACCTGGAGAACATCACCTTCTC +
Preference number: 6 (lower is better)
Translates to: LQLLYINSQQDL*LLGVPGEHHLL
Trigger: GAGAAGGTGATGTTCTCCAGGTACACCTAGGAGCAAAAGGTCTTGCTGAGAATTAATATACAGAAGTTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 72 bp CAAAGTCAAAACGTTTCCGAATCAGAATCATTTTCATaGTACCCATCCTCCGAGCCTACGTTGTTACTGCAC +
Preference number: 6 (lower is better)
Translates to: QSQNVSESESFS*YPSSEPTLLLH
Trigger: GTGCAGTAACAACGTAGGCTCGGAGGATGGGTACAATGAAAATGATTCTGATTCGGAAACGTTTTGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647377.1
CDS GCA 72 bp CTATGCTATACTTTTGTCCCGATGATAACAACTTTCTaGAGCAGTCAGAGTGAGCATTTAGGGCAGCTAAAT +
Preference number: 6 (lower is better)
Translates to: LCYTFVPMITTF*SSQSEHLGQLN
Trigger: ATTTAGCTGCCCTAAATGCTCACTCTGACTGCTGCAGAAAGTTGTTATCATCGGGACAAAAGTATAGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424317.5
CDS GCA 72 bp TCTGGGGTGTCTATTTCAAAGCCTGCAGACAGCACGTaGTCATTACTAAACAAGGATACTATGCTATACTTT +
Preference number: 6 (lower is better)
Translates to: SGVSISKPADST*SLLNKDTMLYF
Trigger: AAAGTATAGCATAGTATCCTTGTTTAGTAATGAGCACGTGCTGTCTGCAGGCTTTGAAATAGACACCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424317.5
ENST00000477852.1
CDS GCA 72 bp TCTTCCAAATTTATCTGGGGTGTCTATTTCAAAGCCTaGAGACAGCACGTGCTCATTACTAAACAAGGATAC +
Preference number: 6 (lower is better)
Translates to: SSKFIWGVYFKA*RQHVLITKQGY
Trigger: GTATCCTTGTTTAGTAATGAGCACGTGCTGTCTGCAGGCTTTGAAATAGACACCCCAGATAAATTTGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424317.5
ENST00000477852.1
CDS GCA 72 bp GAATTTCCAGCATTCAACAACAAATTATTTCTTGGATaGCTAGACTGTACCAGGCTTGGGATACATCCAGGA +
Preference number: 6 (lower is better)
Translates to: EFPAFNNKLFLG*LDCTRLGIHPG
Trigger: TCCTGGATGTATCCCAAGCCTGGTACAGTCTAGGCATCCAAGAAATAATTTGTTGTTGAATGCTGGAAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS GCA 72 bp TTGGGTAACCCTCTTACATTAGAGGTAAAAGCCTTCTaGTTACCAGTAAGGATTCTTAATTCGCTAGCAAGA +
Preference number: 6 (lower is better)
Translates to: LGNPLTLEVKAF*LPVRILNSLAR
Trigger: TCTTGCTAGCGAATTAAGAATCCTTACTGGTAAGCAGAAGGCTTTTACCTCTAATGTAAGAGGGTTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS GCA 72 bp CTTGGAAGATTTCCTCTATTCAAGCAGGCAGTTAGTTaGTTTCTCCCGCAAGTCAATGATGATATTGTAATG +
Preference number: 6 (lower is better)
Translates to: LGRFPLFKQAVS*FLPQVNDDIVM
Trigger: CATTACAATATCATCATTGACTTGCGGGAGAAAGCAACTAACTGCCTGCTTGAATAGAGGAAATCTTCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS TCA 72 bp ATGGATGTTTTGAGGATTGAAGTCTTTGAAGCTAGTTaGGCTAACAAAGATAGAGATCACTTGGGAAAGGTC +
Preference number: 6 (lower is better)
Translates to: MDVLRIEVFEAS*ANKDRDHLGKV
Trigger: GACCTTTCCCAAGTGATCTCTATCTTTGTTAGCTCAACTAGCTTCAAAGACTTCAATCCTCAAAACATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CCA 72 bp ACAATTCCCATGATCATTGATTATTGCACAGTGCAGTaGAGTAAAGGGATTACCGATAAATTTGCGAAAACA +
Preference number: 6 (lower is better)
Translates to: TIPMIIDYCTVQ*SKGITDKFAKT
Trigger: TGTTTTCGCAAATTTATCGGTAATCCCTTTACTCCACTGCACTGTGCAATAATCAATGATCATGGGAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282272.15
ENST00000328737.6
ENST00000424317.5
ENST00000647377.1
CDS TCA 72 bp CACACTAAAGATACTTACAGAATGCAGACTGGTTGTTaGTGGAAAATGGATGTTTTGAGGATTGAAGTCTTT +
Preference number: 6 (lower is better)
Translates to: HTKDTYRMQTGC*WKMDVLRIEVF
Trigger: AAAGACTTCAATCCTCAAAACATCCATTTTCCATCAACAACCAGTCTGCATTCTGTAAGTATCTTTAGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463879.1
CDS CAA 72 bp AGCTCATATGTGACCCAATTATTTACAGTTCAGGGTTaGTTTGCATTTAATTCCTATCTGGCTAGTGATTCT +
Preference number: 6 (lower is better)
Translates to: SSYVTQLFTVQG*FAFNSYLASDS
Trigger: AGAATCACTAGCCAGATAGGAATTAAATGCAAACAAACCCTGAACTGTAAATAATTGGGTCACATATGAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463879.1