RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD42 (Homo sapiens)

Ensembl gene IDs: ENSG00000137494

Ensembl transcript IDs: ENST00000260047.10, ENST00000393389.7, ENST00000393392.6, ENST00000526731.5, ENST00000528190.1, ENST00000528722.5, ENST00000531815.1, ENST00000531895.5, ENST00000533342.6

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGCGTTGGGGTTGGTGTaGCTCCGATGGACAGCTGGG +
Preference number: 2 (lower is better)
Translates to: FIHMWELKYAGLMKIESRALGLV*LRWTAG
Trigger: CCCAGCTGTCCATCGGAGTCACACCAACCCCAACGC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
3UTR-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGCGTTGGGGTTGGTGTaGCTCCGATGGACAGCTGGG +
Preference number: 2 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQALGLV*LRWTAG
Trigger: CCCAGCTGTCCATCGGAGTCACACCAACCCCAACGC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
3UTR-3UTR CCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGCCTGGCGTTGGGGTTaGTGTGACTCCGATGGACAG +
Preference number: 2 (lower is better)
Translates to: FIHMWELKYAGLMKIESRAWRWG*CDSDGQ
Trigger: CTGTCCATCGGAGTCACACCAACCCCAACGCCAGGC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
3UTR-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGCCTGGCGTTGGGGTTaGTGTGACTCCGATGGACAG +
Preference number: 2 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQAWRWG*CDSDGQ
Trigger: CTGTCCATCGGAGTCACACCAACCCCAACGCCAGGC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
3UTR-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGGCAGAAGAATCGCTTaGATCCGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: FIHMWELKYAGLMKIESRGRRIA*IREAEV
Trigger: AACCTCTGCCTCCCGGATTCAAGCGATTCTTCTGCC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
3UTR-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGGCAGAAGAATCGCTTaGATCCGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQGRRIA*IREAEV
Trigger: AACCTCTGCCTCCCGGATTCAAGCGATTCTTCTGCC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
3UTR-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAATATCAGTCAGTCTGGTaGCGGAAGAACTTCTTAGTT +
Preference number: 2 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQYQSVW*RKNFLV
Trigger: AACTAAGAAGTTCTTCCGGCACCAGACTGACTGATA...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
3UTR-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAAAATTGAAAGCAGTCTaGAAAAGCGAAGGAAGCCTA +
Preference number: 2 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQKLKAV*KSEGSL
Trigger: TAGGCTTCCTTCGCTTTTTCAGACTGCTTTCAATTT...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
3UTR-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAAAATTGAAAGCAGTCTaGAAAAGCGAAGGAAGCCTA +
Preference number: 2 (lower is better)
Translates to: FIHMWELKYAGLMKIESRKLKAV*KSEGSL
Trigger: TAGGCTTCCTTCGCTTTTTCAGACTGCTTTCAATTT...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
3UTR-3UTR TCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTTTCCAGTGTTTCCCTaGGTTGATCAACTTCTGCTC +
Preference number: 2 (lower is better)
Translates to: VTQASNRINSSMMIDEETFPVFP*VDQLLL
Trigger: GAGCAGAAGTTGATCAACTCAGGGAAACACTGGAAA...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
3UTR-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAAAAGACTTCACTAAATaGACACTGAAAGACGACCTT +
Preference number: 2 (lower is better)
Translates to: FIHMWELKYAGLMKIESRKDFTK*TLKDDL
Trigger: AAGGTCGTCTTTCAGTGTTCATTTAGTGAAGTCTTT...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393389.7
3UTR-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAATGTGAAAATGGAAATTaGAAGCAGTCTGAAAAAGCG +
Preference number: 2 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQCENGN*KQSEKA
Trigger: CGCTTTTTCAGACTGCTTTCAATTTCCATTTTCACA...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
3UTR-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATGTGAAAATGGAAATTaGAAGCAGTCTGAAAAAGCG +
Preference number: 2 (lower is better)
Translates to: FIHMWELKYAGLMKIESRCENGN*KQSEKA
Trigger: CGCTTTTTCAGACTGCTTTCAATTTCCATTTTCACA...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
3UTR-3UTR TCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATAGTGTTTCCCTGAGTTaGTCAACTTCTGCTCGATAT +
Preference number: 2 (lower is better)
Translates to: PKACTLGHSCIYFLRKINSVSLS*STSARY
Trigger: ATATCGAGCAGAAGTTGATCAACTCAGGGAAACACT...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393392.6
3UTR-3UTR GCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCGAGTTGATCAACTTCTaGTCGATATTCATCAAGCTG +
Preference number: 2 (lower is better)
Translates to: TQASNRINSSMMIDEETSELINF*SIFIKL
Trigger: CAGCTTGATGAATATCGAGCAGAAGTTGATCAACTC...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393392.6
3UTR-3UTR CAA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTTTATGAGAGCGATTaGAACACAAGCAGTCTAGAC +
Preference number: 3 (lower is better)
Translates to: FIHMWELKYAGLMKIESRFYESD*NTSSLD
Trigger: GTCTAGACTGCTTGTGTTCAAATCGCTCTCATAAAA...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
3UTR-3UTR CAA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGCAGTGTTTCCCTGAGTaGATCAACTTCTGCTCGATA +
Preference number: 3 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLQCFPE*INFCSI
Trigger: TATCGAGCAGAAGTTGATCAACTCAGGGAAACACTG...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393392.6
3UTR-3UTR CAA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTACTCTTGGCCACTCTaGTATATACTTCTTGAGAAA +
Preference number: 3 (lower is better)
Translates to: VTQASNRINSSMMIDEETYSWPL*YILLEK
Trigger: TTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTA...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR GCA 90 bp GGATTCAAGTCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTTCACCCACGAGCCACTaGAGCGGCAGCGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GFKSKEPQPKACTLGHSCSPTSH*SGSGPL
Trigger: AAGAGGGCCGCTGCCGCTGCAGTGGCTCGTGGGTGA...ACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGACTTGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CCA 90 bp GGATTCAAGTCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTTGGCCACCCCGGGCATaGCGCAACACCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: GFKSKEPQPKACTLGHSCWPPRA*RNTSDS
Trigger: AGAGTCGGAGGTGTTGCGCCATGCCCGGGGTGGCCA...ACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGACTTGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGATGGAGGGGCCTGAATTaGCCACCCCGGGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGWRGLN*PPRAWR
Trigger: GCGCCATGCCCGGGGTGGCCAATTCAGGCCCCTCCA...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR TCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGACCTCCCAAGGACCACTaGGGCGGAGGCCTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGPPKDH*GGGLGL
Trigger: AAGACCGAGGCCTCCGCCTCAGTGGTCCTTGGGAGG...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR TCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGACCTCCCAGGAGCCACTaGAGCGGCGACTGCGATCGT +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGPPRSH*SGDCDR
Trigger: ACGATCGCAGTCGCCGCTTCAGTGGCTCCTGGGAGG...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR TCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAAGTGGAGGGGCCTaGATTGGCCACCCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQGSGGA*IGHPGH
Trigger: ATGCCCGGGGTGGCCAATTCAGGCCCCTCCACTTCC...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGACACCAGAGGAGTCGCTaGCTGCGTAGCCGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGHQRSR*LRSRGL
Trigger: GAGACCGCGGCTACGCAGCCAGCGACTCCTCTGGTG...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGTGGCCACCCCGGGCATaGCGCAACACCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQWPPRA*RNTSDS
Trigger: AGAGTCGGAGGTGTTGCGCCATGCCCGGGGTGGCCA...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTGGAGGGGCCTGAATTaGCCACCCCGGGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFWRGLN*PPRAWR
Trigger: GCGCCATGCCCGGGGTGGCCAATTCAGGCCCCTCCA...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGATCCTCCACACGTGGTaGCTAGTGCGGCGGCCACCG +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQILHTW*LVRRPP
Trigger: CGGTGGCCGCCGCACTAGCCACCACGTGTGGAGGAT...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR TCA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCGGAAGTGGAGGGGCCTaGATTGGCCACCCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFGSGGA*IGHPGH
Trigger: ATGCCCGGGGTGGCCAATTCAGGCCCCTCCACTTCC...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR TCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAGCGTTGGGGTTGGTGTaGCTCCGATGGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGALGLV*LRWTAG
Trigger: CCCAGCTGTCCATCGGAGTCACACCAACCCCAACGC...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR TCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAACTCTGGGGAGGAGTTaGGTCCAGGCCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGTLGRS*VQAPDA
Trigger: AGCATCAGGGGCCTGGACTCAACTCCTCCCCAGAGT...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR GCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAGCCACCGTCTTCGTCTaGTACTCCCTGCGAATCGCC +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGATVFV*YSLRIA
Trigger: GGCGATTCGCAGGGAGTAGCAGACGAAGACGGTGGC...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR CCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGCGGCCGCCTTCCGCTaGTACTTTCTCGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQAAAFR*YFLGVS
Trigger: AGAGACTCCGAGAAAGTACCAGCGGAAGGCGGCCGC...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR GCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGAGCTGGCGTCTTCACTaGCGCTCACACCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQSWRLH*RSHQRS
Trigger: ACTCCTCTGGTGTGAGCGGCAGTGAAGACGCCAGCT...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAGACTCGGCGCCGGAATaGCCGTGTAGACCGTTTATC +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGDSAPE*PCRPFI
Trigger: GATAAACGGTCTACACGGCCATTCCGGCGCCGAGTC...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR CCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGCAACACCTCCGACTCTaGGGAGGAGTTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQQHLRL*GGVESR
Trigger: CCTGGACTCAACTCCTCCCCAGAGTCGGAGGTGTTG...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGTTTATCCTCCACACGTaGTGGCTAGTGCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQFILHT*WLVRRP
Trigger: TGGCCGCCGCACTAGCCACCACGTGTGGAGGATAAA...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR TCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGTCTCCCAAAAGCCACTaGAGCGGTAGCTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQSPKSH*SGSWRL
Trigger: AAGACGCCAGCTACCGCTTCAGTGGCTTTTGGGAGA...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR TCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGCAGAAGAATCGCTTaGATCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQGRRIA*IREAEV
Trigger: AACCTCTGCCTCCCGGATTCAAGCGATTCTTCTGCC...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR GCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGACCCAAGGTCCTCTCTTaGTCTCTCCCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGPKVLS*SLPEAA
Trigger: TGCAGCTTCTGGGAGAGAGCAAGAGAGGACCTTGGG...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR GCA 90 bp GGATTCAAGTCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTCAAGATGTAAAGGAGTaGATCCCCGGTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: GFKSKEPQPKACTLGHSCQDVKE*IPGHPG
Trigger: CCCAGGATGACCGGGGATGCACTCCTTTACATCTTG...ACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGACTTGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGCATCCCCGGTCATCCTaGGCTGTCAGATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQHPRSS*AVRFAP
Trigger: TGGAGCAAATCTGACAGCCCAGGATGACCGGGGATG...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR CCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGACATCCCCGGTCATCCTaGGCTGTCAGATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGHPRSS*AVRFAP
Trigger: TGGAGCAAATCTGACAGCCCAGGATGACCGGGGATG...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR GCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGCAAGATGTAAAGGAGTaGATCCCCGGTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQQDVKE*IPGHPG
Trigger: CCCAGGATGACCGGGGATGCACTCCTTTACATCTTG...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR CCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATGGAGGGGCCTGAATTaGCCACCCCGGGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRWRGLN*PPRAWR
Trigger: GCGCCATGCCCGGGGTGGCCAATTCAGGCCCCTCCA...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGACCTCCCAGGAGCCACTaGAGCGGCGACTGCGATCGT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRPPRSH*SGDCDR
Trigger: ACGATCGCAGTCGCCGCTTCAGTGGCTCCTGGGAGG...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGGAAGTGGAGGGGCCTaGATTGGCCACCCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQGSGGA*IGHPGH
Trigger: ATGCCCGGGGTGGCCAATTCAGGCCCCTCCACTTCC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGTGCCAGAGCAGCCAATaGAGACACTCCAAACTTCCA +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQCQSSQ*RHSKLP
Trigger: TGGAAGTTTGGAGTGTCTTCATTGGCTGCTCTGGCA...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR TCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGACTGATTGCAGCTATGTaGGATGCTGTCCAACCTCTC +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGLIAAM*DAVQPL
Trigger: GAGAGGTTGGACAGCATCTCACATAGCTGCAATCAG...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR TCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGCTGATTGCAGCTATGTaGGATGCTGTCCAACCTCTC +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQLIAAM*DAVQPL
Trigger: GAGAGGTTGGACAGCATCTCACATAGCTGCAATCAG...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR TCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGATGTACACAAGCATCCTaGCCCCTGATTGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGCTQAS*PLIAAM
Trigger: CATAGCTGCAATCAGGGGTCAGGATGCTTGTGTACA...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR GCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATCACCCACGAGCCACTaGAGCGGCAGCGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRSPTSH*SGSGPL
Trigger: AAGAGGGCCGCTGCCGCTGCAGTGGCTCGTGGGTGA...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAATCACCCACGAGCCACTaGAGCGGCAGCGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQSPTSH*SGSGPL
Trigger: AAGAGGGCCGCTGCCGCTGCAGTGGCTCGTGGGTGA...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACCCACGAGCCACTaGAGCGGCAGCGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVSPTSH*SGSGPL
Trigger: AAGAGGGCCGCTGCCGCTGCAGTGGCTCGTGGGTGA...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGCCGCCCATGAAAAGCTaGATAATGCACAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQPPMKS*IMHRSP
Trigger: TGGAGACCTGTGCATTATGCAGCTTTTCATGGGCGG...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACACCAGAGGAGTCGCTaGCTGCGTAGCCGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQHQRSR*LRSRGL
Trigger: GAGACCGCGGCTACGCAGCCAGCGACTCCTCTGGTG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATGGCCACCCCGGGCATaGCGCAACACCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRWPPRA*RNTSDS
Trigger: AGAGTCGGAGGTGTTGCGCCATGCCCGGGGTGGCCA...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAATCCTCCACACGTGGTaGCTAGTGCGGCGGCCACCG +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQILHTW*LVRRPP
Trigger: CGGTGGCCGCCGCACTAGCCACCACGTGTGGAGGAT...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR TCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGTCGTTGTTACGTGTGTaGTATCAGCTCCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQSLLRV*YQLHAR
Trigger: TCTGGCATGGAGCTGATATCACACACGTAACAACGA...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR TCA 90 bp GGATTCAAGTCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTTTTCCAGTGTTTCCCTaGGTTGATCAACTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GFKSKEPQPKACTLGHSCFPVFP*VDQLLL
Trigger: GAGCAGAAGTTGATCAACTCAGGGAAACACTGGAAA...ACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGACTTGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR TCA 90 bp GGATTCAAGTCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTAAAATCAACCACTGGTaGGACACCAAAACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GFKSKEPQPKACTLGHSCKINHW*DTKTQR
Trigger: TCTCTGGGTTTTGGTGTCTCACCAGTGGTTGATTTT...ACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGACTTGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR GCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGATGCAGCTATGTGAGATaGTGTCCAACCTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGCSYVR*CPTSRC
Trigger: ACAACGAGAGGTTGGACAGCATCTCACATAGCTGCA...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR GCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAATCCTGACCCCTGATTaGAGCTATGTGAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGILTPD*SYVRCC
Trigger: ACAGCATCTCACATAGCTGCAATCAGGGGTCAGGAT...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR GCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGCATTTAACAAGAAGTTaGAAGCAGCCAAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQHLTRS*KQPSRP
Trigger: TGGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATG...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR GCA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTACTCCAGCTGGCCCTaGAGTTCTTTGATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFYSSWP*SSLMVF
Trigger: GAAGACCATCAAAGAACTGCAGGGCCAGCTGGAGTA...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR GCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGTGTATGCTGCCAAAATaGACCTTCTTCCTGGAACCC +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQCMLPK*TFFLEP
Trigger: GGGTTCCAGGAAGAAGGTGCATTTTGGCAGCATACA...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528722.5
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGGCCTCGGTCTTCTCTaGCTGTTCCCCTGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQGLGLL*LFPWSR
Trigger: CCGACTCCAGGGGAACAGCCAGAGAAGACCGAGGCC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCCTCGGTCTTCTCTaGCTGTTCCCCTGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVGLGLL*LFPWSR
Trigger: CCGACTCCAGGGGAACAGCCAGAGAAGACCGAGGCC...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR CCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATGGAGGGGCCTGAATTaGCCACCCCGGGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRWRGLN*PPRAWR
Trigger: GCGCCATGCCCGGGGTGGCCAATTCAGGCCCCTCCA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTGGAGGGGCCTGAATTaGCCACCCCGGGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETWRGLN*PPRAWR
Trigger: GCGCCATGCCCGGGGTGGCCAATTCAGGCCCCTCCA...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGTCTTATCAGTCACACTaGGATCCACTCCACTTCGGA +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQSYQSH*DPLHFG
Trigger: TCCGAAGTGGAGTGGATCCCAGTGTGACTGATAAGA...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
3UTR CAA 72 bp GCCAGGATTCAAGTCCAAAGAGCCCCAGCCCAAAGCTaGTACTCTTGGCCACTCTTGTATATACTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: ARIQVQRAPAQS*YSWPLLYILLE
Trigger: CTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGACTTGAATCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGACCTCCCAAGGACCACTaGGGCGGAGGCCTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRPPKDH*GGGLGL
Trigger: AAGACCGAGGCCTCCGCCTCAGTGGTCCTTGGGAGG...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCCCTCCCAAGGACCACTaGGGCGGAGGCCTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSPPKDH*GGGLGL
Trigger: AAGACCGAGGCCTCCGCCTCAGTGGTCCTTGGGAGG...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGGTCCCGAATGTCACTaGCTCCCTCCCAAGGACCAC +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRGPECH*LPPKDH
Trigger: GTGGTCCTTGGGAGGGAGTCAGTGACATTCGGGACC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR TCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTCCCGAATGTCACTaGCTCCCTCCCAAGGACCAC +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVGPECH*LPPKDH
Trigger: GTGGTCCTTGGGAGGGAGTCAGTGACATTCGGGACC...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR TCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATACCTCCCAGGAGCCACTaGAGCGGCGACTGCGATCGT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIPPRSH*SGDCDR
Trigger: ACGATCGCAGTCGCCGCTTCAGTGGCTCCTGGGAGG...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGCCTCCCAGGAGCCACTaGAGCGGCGACTGCGATCGT +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLPPRSH*SGDCDR
Trigger: ACGATCGCAGTCGCCGCTTCAGTGGCTCCTGGGAGG...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR TCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTCTGGGGAGGAGTTaGGTCCAGGCCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVTLGRS*VQAPDA
Trigger: AGCATCAGGGGCCTGGACTCAACTCCTCCCCAGAGT...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAACTCTGGGGAGGAGTTaGGTCCAGGCCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRTLGRS*VQAPDA
Trigger: AGCATCAGGGGCCTGGACTCAACTCCTCCCCAGAGT...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAGGAAGTGGAGGGGCCTaGATTGGCCACCCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIGSGGA*IGHPGH
Trigger: ATGCCCGGGGTGGCCAATTCAGGCCCCTCCACTTCC...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGGGAAGTGGAGGGGCCTaGATTGGCCACCCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLGSGGA*IGHPGH
Trigger: ATGCCCGGGGTGGCCAATTCAGGCCCCTCCACTTCC...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTCGTTGTTACGTGTGTaGTATCAGCTCCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFSLLRV*YQLHAR
Trigger: TCTGGCATGGAGCTGATATCACACACGTAACAACGA...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR TCA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTCCATGGCTGCTAAGTaGACTGGAAGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFSMAAK*TGRFPL
Trigger: CAATGGAAACCTTCCAGTTCACTTAGCAGCCATGGA...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATCACCCACGAGCCACTaGAGCGGCAGCGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRSPTSH*SGSGPL
Trigger: AAGAGGGCCGCTGCCGCTGCAGTGGCTCGTGGGTGA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGCGGCGGTCTTCACTTaGTCTCACCCACGAGCCACT +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQAAVFT*SHPRAT
Trigger: AGTGGCTCGTGGGTGAGAGCAAGTGAAGACCGCCGC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCGGCGGTCTTCACTTaGTCTCACCCACGAGCCACT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVAAVFT*SHPRAT
Trigger: AGTGGCTCGTGGGTGAGAGCAAGTGAAGACCGCCGC...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGATGTATGCTGCCAAAATaGACCTTCTTCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGCMLPK*TFFLEQ
Trigger: CTGTTCCAGGAAGAAGGTGCATTTTGGCAGCATACA...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR GCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAATCTCCAGCTCGTACTaGATCATGTATGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGISSSY*IMYAAK
Trigger: TTTGGCAGCATACATGATGCAGTACGAGCTGGAGAT...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR GCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGTATGTAAGTCCAGCATaGCAAGCCAAGGAATCAGAG +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQYVSPA*QAKESE
Trigger: CTCTGATTCCTTGGCTTGGCATGCTGGACTTACATA...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR CCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGAGACGCTGCGGCAGTaGCCGAGGTTTTCACTGACC +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRETLRQ*PRFSLT
Trigger: GGTCAGTGAAAACCTCGGCCACTGCCGCAGCGTCTC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAGAGTCGGTAGTTTGGTaGCCTCCAACTTCACTAAAA +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGESVVW*PPTSLK
Trigger: TTTTAGTGAAGTTGGAGGCCACCAAACTACCGACTC...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATACACCAGAGGAGTCGCTaGCTGCGTAGCCGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIHQRSR*LRSRGL
Trigger: GAGACCGCGGCTACGCAGCCAGCGACTCCTCTGGTG...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGCACCAGAGGAGTCGCTaGCTGCGTAGCCGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLHQRSR*LRSRGL
Trigger: GAGACCGCGGCTACGCAGCCAGCGACTCCTCTGGTG...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR CCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATGGCCACCCCGGGCATaGCGCAACACCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRWPPRA*RNTSDS
Trigger: AGAGTCGGAGGTGTTGCGCCATGCCCGGGGTGGCCA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTGGCCACCCCGGGCATaGCGCAACACCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLWPPRA*RNTSDS
Trigger: AGAGTCGGAGGTGTTGCGCCATGCCCGGGGTGGCCA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTCTTATCAGTCACACTaGGATCCACTCCACTTCGGA +
Preference number: 4 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFSYQSH*DPLHFG
Trigger: TCCGAAGTGGAGTGGATCCCAGTGTGACTGATAAGA...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGCGGCCGCCTTCCGCTaGTACTTTCTCGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQAAAFR*YFLGVS
Trigger: AGAGACTCCGAGAAAGTACCAGCGGAAGGCGGCCGC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCATCCTCCACACGTGGTaGCTAGTGCGGCGGCCACCG +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSILHTW*LVRRPP
Trigger: CGGTGGCCGCCGCACTAGCCACCACGTGTGGAGGAT...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR CCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGTCAGTGCCACAAGATaGATGGAATTGGAGGTCATT +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQVSATR*MELEVI
Trigger: AATGACCTCCAATTCCATCCATCTTGTGGCACTGAC...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAAATGCACCTTCTTCCTaGAACCCTTCTCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGNAPSS*NPSQVT
Trigger: AGTGACTTGAGAAGGGTTCCAGGAAGAAGGTGCATT...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528722.5
CDS-3UTR CCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCCCGACTCCAGCCACTTaGCTGGAGAGGCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSPTPAT*LERQQG
Trigger: GCCCTGCTGCCTCTCCAGCCAAGTGGCTGGAGTCGG...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATCCCAAGAGCAGCTGTaGCTGTGGCCACTATCTCCC +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRSQEQL*LWPLSP
Trigger: GGGAGATAGTGGCCACAGTCACAGCTGCTCTTGGGA...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR GCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAGTACTGCATCATGTATaGTGCCAAAATGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGVLHHV*CQNAPS
Trigger: AGAAGGTGCATTTTGGCAGCATACATGATGCAGTAC...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR GCA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCATCTCCAGCTCGTACTaGATCATGTATGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFISSSY*IMYAAK
Trigger: TTTGGCAGCATACATGATGCAGTACGAGCTGGAGAT...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR GCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGACTGGGCTGTCAGATTTaGTCCATTCATTATAAGAGC +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGLGCQI*SIHYKS
Trigger: GCTCTTATAATGAATGGAGCAAATCTGACAGCCCAG...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR CCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGACTCGGCGCCGGAATaGCCGTGTAGACCGTTTATC +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRDSAPE*PCRPFI
Trigger: GATAAACGGTCTACACGGCCATTCCGGCGCCGAGTC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATTCCTGCAGCGACCCTaGAGCGGCGGTCGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIFLQRP*SGGRSL
Trigger: AAGAGAGCGACCGCCGCTCCAGGGTCGCTGCAGGAA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAGGCCTCGGTCTTCTCTaGCTGTTCCCCTGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIGLGLL*LFPWSR
Trigger: CCGACTCCAGGGGAACAGCCAGAGAAGACCGAGGCC...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGAACTACCAACGCTGTaGCCGCCTTCGACACTCCCT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRELPTL*PPSTLP
Trigger: AGGGAGTGTCGAAGGCGGCCACAGCGTTGGTAGTTC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGAACTACCAACGCTGTaGCCGCCTTCGACACTCCCT +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQELPTL*PPSTLP
Trigger: AGGGAGTGTCGAAGGCGGCCACAGCGTTGGTAGTTC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACAACACCTCCGACTCTaGGGAGGAGTTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQQHLRL*GGVESR
Trigger: CCTGGACTCAACTCCTCCCCAGAGTCGGAGGTGTTG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAACACCTCCGACTCTaGGGAGGAGTTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVQHLRL*GGVESR
Trigger: CCTGGACTCAACTCCTCCCCAGAGTCGGAGGTGTTG...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGATCTAAGGAGGTTCTaGAAGGTTTCCATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQDLRRF*KVSIVV
Trigger: GACTACAATGGAAACCTTCCAGAACCTCCTTAGATC...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR CCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGTGCCACAAGATGGATaGAATTGGAGGTCATTATGT +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQVPQDG*NWRSLC
Trigger: ACATAATGACCTCCAATTCCATCCATCTTGTGGCAC...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGGCCGAGGTTTTCACTaGCCCTTCTCAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQGRGFH*PFSSHC
Trigger: GCAGTGACTTGAGAAGGGTCAGTGAAAACCTCGGCC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR TCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCCGAGGTTTTCACTaGCCCTTCTCAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVGRGFH*PFSSHC
Trigger: GCAGTGACTTGAGAAGGGTCAGTGAAAACCTCGGCC...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGGTCCCGAATGTCACTaGCTCCCTCCCAAGGACCAC +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRGPECH*LPPKDH
Trigger: GTGGTCCTTGGGAGGGAGTCAGTGACATTCGGGACC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGACTGCGATCGTCACTaGCTCTATCCCCGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQDCDRH*LYPRSH
Trigger: GTGACTTCGGGGATAGAGTCAGTGACGATCGCAGTC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATCTCCCAAAAGCCACTaGAGCGGTAGCTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRSPKSH*SGSWRL
Trigger: AAGACGCCAGCTACCGCTTCAGTGGCTTTTGGGAGA...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAACTCTGGGGAGGAGTTaGGTCCAGGCCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRTLGRS*VQAPDA
Trigger: AGCATCAGGGGCCTGGACTCAACTCCTCCCCAGAGT...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGACTCTGGGGAGGAGTTaGGTCCAGGCCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLTLGRS*VQAPDA
Trigger: AGCATCAGGGGCCTGGACTCAACTCCTCCCCAGAGT...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAGTGAAAGAATGTCCATaGGTTGCAGCAAGATGTAAA +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGVKECP*VAARCK
Trigger: TTTACATCTTGCTGCAACTCATGGACATTCTTTCAC...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR TCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAAAATTGAAAGCAGTCTaGAAAAGCGAAGGAAGCCTA +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGKLKAV*KSEGSL
Trigger: TAGGCTTCCTTCGCTTTTTCAGACTGCTTTCAATTT...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAAATTCACGTCGCTGCTaGAGAAGGTGCTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQNSRRC*RRCCLP
Trigger: GGGGAGACAGCACCTTCTGCAGCAGCGACGTGAATT...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACCCAAGGTCCTCTCTTaGTCTCTCCCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQPKVLS*SLPEAA
Trigger: TGCAGCTTCTGGGAGAGAGCAAGAGAGGACCTTGGG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCCAAGGTCCTCTCTTaGTCTCTCCCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVPKVLS*SLPEAA
Trigger: TGCAGCTTCTGGGAGAGAGCAAGAGAGGACCTTGGG...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGCGGCGGTCTTCACTTaGTCTCACCCACGAGCCACT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRAAVFT*SHPRAT
Trigger: AGTGGCTCGTGGGTGAGAGCAAGTGAAGACCGCCGC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATGCGGCGGTCTTCACTTaGTCTCACCCACGAGCCACT +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINAAVFT*SHPRAT
Trigger: AGTGGCTCGTGGGTGAGAGCAAGTGAAGACCGCCGC...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR GCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGACTATTTCTGAAAGCTaGTTTACATCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQTISES*FTSPAR
Trigger: ACGAGCTGGAGATGTAAAGCAGCTTTCAGAAATAGT...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR GCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCGCCACCGTCTTCGTCTaGTACTCCCTGCGAATCGCC +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSATVFV*YSLRIA
Trigger: GGCGATTCGCAGGGAGTAGCAGACGAAGACGGTGGC...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR GCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGTGGAATCAACCTAAGTaGACATCAGTGATGAATGGA +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQWNQPK*TSVMNG
Trigger: TCCATTCATCACTGATGTGCACTTAGGTTGATTCCA...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAGAGACGCTGCGGCAGTaGCCGAGGTTTTCACTGACC +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIETLRQ*PRFSLT
Trigger: GGTCAGTGAAAACCTCGGCCACTGCCGCAGCGTCTC...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCGAGACGCTGCGGCAGTaGCCGAGGTTTTCACTGACC +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSETLRQ*PRFSLT
Trigger: GGTCAGTGAAAACCTCGGCCACTGCCGCAGCGTCTC...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACATCCCCGGTCATCCTaGGCTGTCAGATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQHPRSS*AVRFAP
Trigger: TGGAGCAAATCTGACAGCCCAGGATGACCGGGGATG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGGCGGCCGCCTTCCGCTaGTACTTTCTCGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLAAAFR*YFLGVS
Trigger: AGAGACTCCGAGAAAGTACCAGCGGAAGGCGGCCGC...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATCCCAAGAGCAGCTGTaGCTGTGGCCACTATCTCCC +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRSQEQL*LWPLSP
Trigger: GGGAGATAGTGGCCACAGTCACAGCTGCTCTTGGGA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCAATGCTAAAGTTTCCTaGTCCTCTAGGTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFNAKVS*SSRSFP
Trigger: AGGAAAAGACCTAGAGGATCAGGAAACTTTAGCATT...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR TCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGAAAGACTTCACTAAATaGACACTGAAAGACGACCTT +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQKDFTK*TLKDDL
Trigger: AAGGTCGTCTTTCAGTGTTCATTTAGTGAAGTCTTT...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR TCA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGTCACACAAAAATGAATaGAATACTGTCAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: VPNYVSPACQAKESEAPQSHKNE*NTVSAT
Trigger: TGTGGCACTGACAGTATTTCATTCATTTTTGTGTGA...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAAGCTGGCGTCTTCACTaGCGCTCACACCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRSWRLH*RSHQRS
Trigger: ACTCCTCTGGTGTGAGCGGCAGTGAAGACGCCAGCT...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACTCTCTCCCAGAAGCTaGAGCGGAAACCTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQLSPRS*SGNLRL
Trigger: AAGACGAAGGTTTCCGCTGCAGCTTCTGGGAGAGAG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACCTGGAACAGGGGTTTaGAGTCTCCCTAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQPGTGV*SLPRGS
Trigger: ACTTCCTCTAGGGAGACTGCAAACCCCTGTTCCAGG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTGGAACAGGGGTTTaGAGTCTCCCTAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVPGTGV*SLPRGS
Trigger: ACTTCCTCTAGGGAGACTGCAAACCCCTGTTCCAGG...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACAAGATGTAAAGGAGTaGATCCCCGGTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQQDVKE*IPGHPG
Trigger: CCCAGGATGACCGGGGATGCACTCCTTTACATCTTG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGACAAGATGTAAAGGAGTaGATCCCCGGTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRQDVKE*IPGHPG
Trigger: CCCAGGATGACCGGGGATGCACTCCTTTACATCTTG...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAGACTCGGCGCCGGAATaGCCGTGTAGACCGTTTATC +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIDSAPE*PCRPFI
Trigger: GATAAACGGTCTACACGGCCATTCCGGCGCCGAGTC...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTGACTCGGCGCCGGAATaGCCGTGTAGACCGTTTATC +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETDSAPE*PCRPFI
Trigger: GATAAACGGTCTACACGGCCATTCCGGCGCCGAGTC...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR CCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGAACTACCAACGCTGTaGCCGCCTTCGACACTCCCT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRELPTL*PPSTLP
Trigger: AGGGAGTGTCGAAGGCGGCCACAGCGTTGGTAGTTC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTGAACTACCAACGCTGTaGCCGCCTTCGACACTCCCT +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETELPTL*PPSTLP
Trigger: AGGGAGTGTCGAAGGCGGCCACAGCGTTGGTAGTTC...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR CCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATACAACACCTCCGACTCTaGGGAGGAGTTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIQHLRL*GGVESR
Trigger: CCTGGACTCAACTCCTCCCCAGAGTCGGAGGTGTTG...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATCAACACCTCCGACTCTaGGGAGGAGTTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINQHLRL*GGVESR
Trigger: CCTGGACTCAACTCCTCCCCAGAGTCGGAGGTGTTG...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CCA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTCATACTCAGCCCCCTaGATAAACTGTAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFSYSAP*INCKMF
Trigger: GAACATTTTACAGTTTATCCAGGGGGCTGAGTATGA...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTTTATCCTCCACACGTaGTGGCTAGTGCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLFILHT*WLVRRP
Trigger: TGGCCGCCGCACTAGCCACCACGTGTGGAGGATAAA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGGCCGAGGTTTTCACTaGCCCTTCTCAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRGRGFH*PFSSHC
Trigger: GCAGTGACTTGAGAAGGGTCAGTGAAAACCTCGGCC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAGACTGCGATCGTCACTaGCTCTATCCCCGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIDCDRH*LYPRSH
Trigger: GTGACTTCGGGGATAGAGTCAGTGACGATCGCAGTC...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTGACTGCGATCGTCACTaGCTCTATCCCCGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETDCDRH*LYPRSH
Trigger: GTGACTTCGGGGATAGAGTCAGTGACGATCGCAGTC...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATCTCCCAAAAGCCACTaGAGCGGTAGCTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRSPKSH*SGSWRL
Trigger: AAGACGCCAGCTACCGCTTCAGTGGCTTTTGGGAGA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCTCCCAAAAGCCACTaGAGCGGTAGCTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETSPKSH*SGSWRL
Trigger: AAGACGCCAGCTACCGCTTCAGTGGCTTTTGGGAGA...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAATGCCAGAGCAGCCAATaGAGACACTCCAAACTTCCA +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQCQSSQ*RHSKLP
Trigger: TGGAAGTTTGGAGTGTCTTCATTGGCTGCTCTGGCA...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACTGATTGCAGCTATGTaGGATGCTGTCCAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQLIAAM*DAVQPL
Trigger: GAGAGGTTGGACAGCATCTCACATAGCTGCAATCAG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAATGTACACAAGCATCCTaGCCCCTGATTGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQCTQAS*PLIAAM
Trigger: CATAGCTGCAATCAGGGGTCAGGATGCTTGTGTACA...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTAATAGATCAGATTTaGGGTGACACAAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFLIDQI*GDTSLK
Trigger: TTTGAGGCTTGTGTCACCTCAAATCTGATCTATTAA...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAAATTCACGTCGCTGCTaGAGAAGGTGCTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCINSRRC*RRCCLP
Trigger: GGGGAGACAGCACCTTCTGCAGCAGCGACGTGAATT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTAATTCACGTCGCTGCTaGAGAAGGTGCTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETNSRRC*RRCCLP
Trigger: GGGGAGACAGCACCTTCTGCAGCAGCGACGTGAATT...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATACCCAAGGTCCTCTCTTaGTCTCTCCCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIPKVLS*SLPEAA
Trigger: TGCAGCTTCTGGGAGAGAGCAAGAGAGGACCTTGGG...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGACCGCCCATGAAAAGCTaGATAATGCACAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRPPMKS*IMHRSP
Trigger: TGGAGACCTGTGCATTATGCAGCTTTTCATGGGCGG...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGCCCATGAAAAGCTaGATAATGCACAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVPPMKS*IMHRSP
Trigger: TGGAGACCTGTGCATTATGCAGCTTTTCATGGGCGG...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACCGCCCATGAAAAGCTaGATAATGCACAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQPPMKS*IMHRSP
Trigger: TGGAGACCTGTGCATTATGCAGCTTTTCATGGGCGG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACTGGAGTCGGTAGTTTaGTGGCCTCCAACTTCACTA +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQLESVV*WPPTSL
Trigger: TAGTGAAGTTGGAGGCCACCAAACTACCGACTCCAG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGACATCCCCGGTCATCCTaGGCTGTCAGATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRHPRSS*AVRFAP
Trigger: TGGAGCAAATCTGACAGCCCAGGATGACCGGGGATG...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGCATCCCCGGTCATCCTaGGCTGTCAGATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLHPRSS*AVRFAP
Trigger: TGGAGCAAATCTGACAGCCCAGGATGACCGGGGATG...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTGCCACATCACTaGGTCTCTCCCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVSLPHH*VSPLLC
Trigger: ACAAAGCAGGGGAGAGACCCAGTGATGTGGCAAAGA...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAACAATAGCCAAAATATaGAATCAACCTAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: PNYVSPACQAKESEAPQGTIAKI*NQPKCT
Trigger: TGTGCACTTAGGTTGATTCCATATTTTGGCTATTGT...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGAGATGGCTGCCACCTaGAAGGTTTCCATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESREMAAT*KVSIVV
Trigger: GACTACAATGGAAACCTTCCAGGTGGCAGCCATCTC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526731.5
CDS-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATCGTTGTTACGTGTGTaGTATCAGCTCCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRSLLRV*YQLHAR
Trigger: TCTGGCATGGAGCTGATATCACACACGTAACAACGA...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAATCGTTGTTACGTGTGTaGTATCAGCTCCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQSLLRV*YQLHAR
Trigger: TCTGGCATGGAGCTGATATCACACACGTAACAACGA...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCATGGCTGCTAAGTaGACTGGAAGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVSMAAK*TGRFPL
Trigger: CAATGGAAACCTTCCAGTTCACTTAGCAGCCATGGA...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGAATTTGAAACAGTaGAGGTGGCCTTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVRNLKQ*RWPSMA
Trigger: AGCCATGGAAGGCCACCTTCACTGTTTCAAATTCCT...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAGGCCCTGCAGTTCTTTaGTGGTCCTCTTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIGPAVL*WSSLPH
Trigger: ATGTGGCAAAGAGGACCATCAAAGAACTGCAGGGCC...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531815.1
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGACTCTCTCCCAGAAGCTaGAGCGGAAACCTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRLSPRS*SGNLRL
Trigger: AAGACGAAGGTTTCCGCTGCAGCTTCTGGGAGAGAG...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTCTCTCTCCCAGAAGCTaGAGCGGAAACCTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETLSPRS*SGNLRL
Trigger: AAGACGAAGGTTTCCGCTGCAGCTTCTGGGAGAGAG...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGACCTGGAACAGGGGTTTaGAGTCTCCCTAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRPGTGV*SLPRGS
Trigger: ACTTCCTCTAGGGAGACTGCAAACCCCTGTTCCAGG...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATGCAGCTATGTGAGATaGTGTCCAACCTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRCSYVR*CPTSRC
Trigger: ACAACGAGAGGTTGGACAGCATCTCACATAGCTGCA...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAATCCTGACCCCTGATTaGAGCTATGTGAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQILTPD*SYVRCC
Trigger: ACAGCATCTCACATAGCTGCAATCAGGGGTCAGGAT...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATCCTGACCCCTGATTaGAGCTATGTGAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVILTPD*SYVRCC
Trigger: ACAGCATCTCACATAGCTGCAATCAGGGGTCAGGAT...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAATCCTGACCCCTGATTaGAGCTATGTGAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRILTPD*SYVRCC
Trigger: ACAGCATCTCACATAGCTGCAATCAGGGGTCAGGAT...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATACAAGATGTAAAGGAGTaGATCCCCGGTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIQDVKE*IPGHPG
Trigger: CCCAGGATGACCGGGGATGCACTCCTTTACATCTTG...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTCAAGATGTAAAGGAGTaGATCCCCGGTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETQDVKE*IPGHPG
Trigger: CCCAGGATGACCGGGGATGCACTCCTTTACATCTTG...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGACATTTAACAAGAAGTTaGAAGCAGCCAAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRHLTRS*KQPSRP
Trigger: TGGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATG...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTAACAAGAAGTTaGAAGCAGCCAAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVHLTRS*KQPSRP
Trigger: TGGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATG...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATACTCCAGCTGGCCCTaGAGTTCTTTGATGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRYSSWP*SSLMVL
Trigger: GAGGACCATCAAAGAACTGCAGGGCCAGCTGGAGTA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531815.1
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAATCTTATCAGTCACACTaGGATCCACTCCACTTCGGA +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQSYQSH*DPLHFG
Trigger: TCCGAAGTGGAGTGGATCCCAGTGTGACTGATAAGA...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATGCCAGAGCAGCCAATaGAGACACTCCAAACTTCCA +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRCQSSQ*RHSKLP
Trigger: TGGAAGTTTGGAGTGTCTTCATTGGCTGCTCTGGCA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCTGCCAGAGCAGCCAATaGAGACACTCCAAACTTCCA +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSCQSSQ*RHSKLP
Trigger: TGGAAGTTTGGAGTGTCTTCATTGGCTGCTCTGGCA...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGACTGATTGCAGCTATGTaGGATGCTGTCCAACCTCTC +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRLIAAM*DAVQPL
Trigger: GAGAGGTTGGACAGCATCTCACATAGCTGCAATCAG...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATCTGATTGCAGCTATGTaGGATGCTGTCCAACCTCTC +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINLIAAM*DAVQPL
Trigger: GAGAGGTTGGACAGCATCTCACATAGCTGCAATCAG...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR TCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTCTGATTGCAGCTATGTaGGATGCTGTCCAACCTCTC +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETLIAAM*DAVQPL
Trigger: GAGAGGTTGGACAGCATCTCACATAGCTGCAATCAG...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATGTACACAAGCATCCTaGCCCCTGATTGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRCTQAS*PLIAAM
Trigger: CATAGCTGCAATCAGGGGTCAGGATGCTTGTGTACA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATTGTACACAAGCATCCTaGCCCCTGATTGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINCTQAS*PLIAAM
Trigger: CATAGCTGCAATCAGGGGTCAGGATGCTTGTGTACA...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR TCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCTGTACACAAGCATCCTaGCCCCTGATTGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSCTQAS*PLIAAM
Trigger: CATAGCTGCAATCAGGGGTCAGGATGCTTGTGTACA...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAATGTATGCTGCCAAAATaGACCTTCTTCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQCMLPK*TFFLEQ
Trigger: CTGTTCCAGGAAGAAGGTGCATTTTGGCAGCATACA...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAATCTCCAGCTCGTACTaGATCATGTATGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRISSSY*IMYAAK
Trigger: TTTGGCAGCATACATGATGCAGTACGAGCTGGAGAT...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAATCTCCAGCTCGTACTaGATCATGTATGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQISSSY*IMYAAK
Trigger: TTTGGCAGCATACATGATGCAGTACGAGCTGGAGAT...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATCTCCAGCTCGTACTaGATCATGTATGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVISSSY*IMYAAK
Trigger: TTTGGCAGCATACATGATGCAGTACGAGCTGGAGAT...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGACCGCCCATGAAAAGCTaGATAATGCACAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRPPMKS*IMHRSP
Trigger: TGGAGACCTGTGCATTATGCAGCTTTTCATGGGCGG...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGCCGCCCATGAAAAGCTaGATAATGCACAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLPPMKS*IMHRSP
Trigger: TGGAGACCTGTGCATTATGCAGCTTTTCATGGGCGG...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATATGTAAGTCCAGCATaGCAAGCCAAGGAATCAGAG +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRYVSPA*QAKESE
Trigger: CTCTGATTCCTTGGCTTGGCATGCTGGACTTACATA...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGACTGGAGTCGGTAGTTTaGTGGCCTCCAACTTCACTA +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRLESVV*WPPTSL
Trigger: TAGTGAAGTTGGAGGCCACCAAACTACCGACTCCAG...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGCTGGAGTCGGTAGTTTaGTGGCCTCCAACTTCACTA +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLLESVV*WPPTSL
Trigger: TAGTGAAGTTGGAGGCCACCAAACTACCGACTCCAG...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR CCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGAAGGTGGCCTTCCATaGCTGCTAAGTGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILREGGLP*LLSELE
Trigger: TTCCAGTTCACTTAGCAGCCATGGAAGGCCACCTTC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATGAAGGTGGCCTTCCATaGCTGCTAAGTGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINEGGLP*LLSELE
Trigger: TTCCAGTTCACTTAGCAGCCATGGAAGGCCACCTTC...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGGAAGGTGGCCTTCCATaGCTGCTAAGTGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLEGGLP*LLSELE
Trigger: TTCCAGTTCACTTAGCAGCCATGGAAGGCCACCTTC...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATCTTTGCCACATCACTaGGTCTCTCCCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRSLPHH*VSPLLC
Trigger: ACAAAGCAGGGGAGAGACCCAGTGATGTGGCAAAGA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCTTTGCCACATCACTaGGTCTCTCCCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETSLPHH*VSPLLC
Trigger: ACAAAGCAGGGGAGAGACCCAGTGATGTGGCAAAGA...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGACGTTCATACTCCAGCTaGCCCTGCAGTTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRRSYSS*PCSSLM
Trigger: CATCAAAGAACTGCAGGGCCAGCTGGAGTATGAACG...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATCGTTCATACTCCAGCTaGCCCTGCAGTTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINRSYSS*PCSSLM
Trigger: CATCAAAGAACTGCAGGGCCAGCTGGAGTATGAACG...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATACGTTCATACTCCAGCTaGCCCTGCAGTTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIRSYSS*PCSSLM
Trigger: CATCAAAGAACTGCAGGGCCAGCTGGAGTATGAACG...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGCGTTCATACTCCAGCTaGCCCTGCAGTTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLRSYSS*PCSSLM
Trigger: CATCAAAGAACTGCAGGGCCAGCTGGAGTATGAACG...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGTCAGTGCCACAAGATaGATGGAATTGGAGGTCATT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRVSATR*MELEVI
Trigger: AATGACCTCCAATTCCATCCATCTTGTGGCACTGAC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATCGTTGTTACGTGTGTaGTATCAGCTCCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRSLLRV*YQLHAR
Trigger: TCTGGCATGGAGCTGATATCACACACGTAACAACGA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTCGTTGTTACGTGTGTaGTATCAGCTCCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLSLLRV*YQLHAR
Trigger: TCTGGCATGGAGCTGATATCACACACGTAACAACGA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATCCATGGCTGCTAAGTaGACTGGAAGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRSMAAK*TGRFPL
Trigger: CAATGGAAACCTTCCAGTTCACTTAGCAGCCATGGA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAAGGAATTTGAAACAGTaGAGGTGGCCTTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIRNLKQ*RWPSMA
Trigger: AGCCATGGAAGGCCACCTTCACTGTTTCAAATTCCT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATGCATAGGAGTTaGTCCATTATCAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVFMHRS*SIISTL
Trigger: GAGCGTGCTGATAATGGATCAACTCCTATGCATAAA...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGGCCCTGCAGTTCTTTaGTGGTCTTTTCAGACTCAA +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRGPAVL*WSFQTQ
Trigger: TTGAGTCTGAAAAGACCATCAAAGAACTGCAGGGCC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGGGCCCTGCAGTTCTTTaGTGGTCTTTTCAGACTCAA +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLGPAVL*WSFQTQ
Trigger: TTGAGTCTGAAAAGACCATCAAAGAACTGCAGGGCC...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR TCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTTTCCCTGAGTTaGTCAACTTCTGCTCGATAT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVSVSLS*STSARY
Trigger: ATATCGAGCAGAAGTTGATCAACTCAGGGAAACACT...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATACCTCTTCTCTTTGTTTaGCTCACAAGAAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIPLLFV*LTRSAV
Trigger: GACAGCGCTTCTTGTGAGTCAAACAAAGAGAAGAGG...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR GCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGTACTGCATCATGTATaGTGCCAAAATGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRVLHHV*CQNAPS
Trigger: AGAAGGTGCATTTTGGCAGCATACATGATGCAGTAC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATGCAGCTATGTGAGATaGTGTCCAACCTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRCSYVR*CPTSRC
Trigger: ACAACGAGAGGTTGGACAGCATCTCACATAGCTGCA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCTGCAGCTATGTGAGATaGTGTCCAACCTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSCSYVR*CPTSRC
Trigger: ACAACGAGAGGTTGGACAGCATCTCACATAGCTGCA...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTGCAGCTATGTGAGATaGTGTCCAACCTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLCSYVR*CPTSRC
Trigger: ACAACGAGAGGTTGGACAGCATCTCACATAGCTGCA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAATCCTGACCCCTGATTaGAGCTATGTGAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIILTPD*SYVRCC
Trigger: ACAGCATCTCACATAGCTGCAATCAGGGGTCAGGAT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGATCCTGACCCCTGATTaGAGCTATGTGAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLILTPD*SYVRCC
Trigger: ACAGCATCTCACATAGCTGCAATCAGGGGTCAGGAT...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACTGGGCTGTCAGATTTaGTCCATTCATTATAAGAGC +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQLGCQI*SIHYKS
Trigger: GCTCTTATAATGAATGGAGCAAATCTGACAGCCCAG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATACATTTAACAAGAAGTTaGAAGCAGCCAAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIHLTRS*KQPSRP
Trigger: TGGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATG...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCCATTTAACAAGAAGTTaGAAGCAGCCAAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSHLTRS*KQPSRP
Trigger: TGGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATG...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTGGGTCTCTCCCCTaGTTTGTTGGTAATATTACT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVTGSLP*FVGNIT
Trigger: AGTAATATTACCAACAAAGCAGGGGAGAGACCCAGT...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATACTCCAGCTGGCCCTaGAGTTCTTTGATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIYSSWP*SSLMVF
Trigger: AAAGACCATCAAAGAACTGCAGGGCCAGCTGGAGTA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTACTCCAGCTGGCCCTaGAGTTCTTTGATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETYSSWP*SSLMVF
Trigger: AAAGACCATCAAAGAACTGCAGGGCCAGCTGGAGTA...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR GCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATATCAGTCAGTCTGGTaGCGGAAGAACTTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRYQSVW*RKNFLV
Trigger: AACTAAGAAGTTCTTCCGGCACCAGACTGACTGATA...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATCTTATCAGTCACACTaGGATCTCCACTTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCISYQSH*DLHFGA
Trigger: TGCTCCGAAGTGGAGATCCCAGTGTGACTGATAAGA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTGAAGAACCTCTaGGCCAAATCCAGTACATTT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVCLKNL*AKSSTF
Trigger: AAATGTACTGGATTTGGCCCAGAGGTTCTTCAAGCA...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGACATAAATCATCCTTaGCATCAGTGCTTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVDINHP*HQCFPQ
Trigger: TTGAGGGAAGCACTGATGCCAAGGATGATTTATGTC...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCTCTTATCAGTCACACTaGGATCCACTCCACTTCGGA +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSSYQSH*DPLHFG
Trigger: TCCGAAGTGGAGTGGATCCCAGTGTGACTGATAAGA...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGTGCCACAAGATGGATaGAATTGGAGGTCATTATGT +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQVPQDG*NWRSLC
Trigger: ACATAATGACCTCCAATTCCATCCATCTTGTGGCAC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGTGAAAGAATGTCCATaGGTTGCAGCAAGATGTAAA +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRVKECP*VAARCK
Trigger: TTTACATCTTGCTGCAACTCATGGACATTCTTTCAC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATTTCCAGTGTTTCCCTaGGTTGATCAACTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRFPVFP*VDQLLL
Trigger: GAGCAGAAGTTGATCAACTCAGGGAAACACTGGAAA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR TCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTTTCCAGTGTTTCCCTaGGTTGATCAACTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLFPVFP*VDQLLL
Trigger: GAGCAGAAGTTGATCAACTCAGGGAAACACTGGAAA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTGCCAGAGCAGCCAATaGAGACACACTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETCQSSQ*RHTISE
Trigger: TTCAGAAATAGTGTGTCTTCATTGGCTGCTCTGGCA...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR TCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTAAAATCAACCACTGGTaGGACACCAAAACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETKINHW*DTKTQR
Trigger: TCTCTGGGTTTTGGTGTCTCACCAGTGGTTGATTTT...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATGTATGCTGCCAAAATaGACCTTCTTCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCICMLPK*TFFLEQ
Trigger: CTGTTCCAGGAAGAAGGTGCATTTTGGCAGCATACA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTGTATGCTGCCAAAATaGACCTTCTTCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETCMLPK*TFFLEQ
Trigger: CTGTTCCAGGAAGAAGGTGCATTTTGGCAGCATACA...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAATCTCCAGCTCGTACTaGATCATGTATGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIISSSY*IMYAAK
Trigger: TTTGGCAGCATACATGATGCAGTACGAGCTGGAGAT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAACTATTTCTGAAAGCTaGTTTACATCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQTISES*FTSPAR
Trigger: ACGAGCTGGAGATGTAAAGCAGCTTTCAGAAATAGT...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAATGGAATCAACCTAAGTaGACATCAGTGATGAATGGA +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQWNQPK*TSVMNG
Trigger: TCCATTCATCACTGATGTGCACTTAGGTTGATTCCA...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGAGTCGGTAGTTTGGTaGCCTCCAACTTCACTAAAA +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRESVVW*PPTSLK
Trigger: TTTTAGTGAAGTTGGAGGCCACCAAACTACCGACTC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCGAGTCGGTAGTTTGGTaGCCTCCAACTTCACTAAAA +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSESVVW*PPTSLK
Trigger: TTTTAGTGAAGTTGGAGGCCACCAAACTACCGACTC...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR CCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATGCAAACACTCTATGTaGCCTTGTCCAGCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCICKHSM*PCPAAL
Trigger: TAAAGCTGCTGGACAAGGCCACATAGAGTGTTTGCA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTGCAAACACTCTATGTaGCCTTGTCCAGCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETCKHSM*PCPAAL
Trigger: TAAAGCTGCTGGACAAGGCCACATAGAGTGTTTGCA...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTGCAAACACTCTATGTaGCCTTGTCCAGCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLCKHSM*PCPAAL
Trigger: TAAAGCTGCTGGACAAGGCCACATAGAGTGTTTGCA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATTAAAGGCAGCCACATaGCCTGGAAATGCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCILKAAT*PGNAKV
Trigger: AACTTTAGCATTTCCAGGTCATGTGGCTGCCTTTAA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATTTAAAGGCAGCCACATaGCCTGGAAATGCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINLKAAT*PGNAKV
Trigger: AACTTTAGCATTTCCAGGTCATGTGGCTGCCTTTAA...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR TCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCTTAAAGGCAGCCACATaGCCTGGAAATGCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSLKAAT*PGNAKV
Trigger: AACTTTAGCATTTCCAGGTCATGTGGCTGCCTTTAA...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATTTATGCATAGGAGTTaGTCCATTATCAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRFMHRS*SIISTL
Trigger: GAGCGTGCTGATAATGGATCAACTCCTATGCATAAA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR TCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATTTATGCATAGGAGTTaGTCCATTATCAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIFMHRS*SIISTL
Trigger: GAGCGTGCTGATAATGGATCAACTCCTATGCATAAA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR TCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTTTATGCATAGGAGTTaGTCCATTATCAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLFMHRS*SIISTL
Trigger: GAGCGTGCTGATAATGGATCAACTCCTATGCATAAA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAAGTGTTTCCCTGAGTTaGTCAACTTCTGCTCGATAT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCISVSLS*STSARY
Trigger: ATATCGAGCAGAAGTTGATCAACTCAGGGAAACACT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR TCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCAGTGTTTCCCTGAGTTaGTCAACTTCTGCTCGATAT +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSSVSLS*STSARY
Trigger: ATATCGAGCAGAAGTTGATCAACTCAGGGAAACACT...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAATCACACAAAAATGAATaGAATACTGTCAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQSHKNE*NTVSAT
Trigger: TGTGGCACTGACAGTATTTCATTCATTTTTGTGTGA...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAGTACTGCATCATGTATaGTGCCAAAATGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIVLHHV*CQNAPS
Trigger: AGAAGGTGCATTTTGGCAGCATACATGATGCAGTAC...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATGTACTGCATCATGTATaGTGCCAAAATGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINVLHHV*CQNAPS
Trigger: AGAAGGTGCATTTTGGCAGCATACATGATGCAGTAC...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTGTACTGCATCATGTATaGTGCCAAAATGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETVLHHV*CQNAPS
Trigger: AGAAGGTGCATTTTGGCAGCATACATGATGCAGTAC...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGACTGGGCTGTCAGATTTaGTCCATTCATTATAAGAGC +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRLGCQI*SIHYKS
Trigger: GCTCTTATAATGAATGGAGCAAATCTGACAGCCCAG...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCCTGGGCTGTCAGATTTaGTCCATTCATTATAAGAGC +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSLGCQI*SIHYKS
Trigger: GCTCTTATAATGAATGGAGCAAATCTGACAGCCCAG...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTCTGGGCTGTCAGATTTaGTCCATTCATTATAAGAGC +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETLGCQI*SIHYKS
Trigger: GCTCTTATAATGAATGGAGCAAATCTGACAGCCCAG...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAGCTTTTAAAACTTaGGTCGCACTGCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVKAFKT*VALLIL
Trigger: TAGAATGAGCAGTGCGACGCAAGTTTTAAAAGCTTT...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAAACTGTAAAATGTTCTaGTTGAAGAACCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRNCKMF*LKNLWA
Trigger: GGCCCAGAGGTTCTTCAAGCAGAACATTTTACAGTT...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGAACTGTAAAATGTTCTaGTTGAAGAACCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLNCKMF*LKNLWA
Trigger: GGCCCAGAGGTTCTTCAAGCAGAACATTTTACAGTT...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTAACTGTAAAATGTTCTaGTTGAAGAACCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETNCKMF*LKNLWA
Trigger: GGCCCAGAGGTTCTTCAAGCAGAACATTTTACAGTT...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAACTGGGTCTCTCCCCTaGTTTGTTGGTAATATTACT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCITGSLP*FVGNIT
Trigger: AGTAATATTACCAACAAAGCAGGGGAGAGACCCAGT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTACTGGGTCTCTCCCCTaGTTTGTTGGTAATATTACT +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETTGSLP*FVGNIT
Trigger: AGTAATATTACCAACAAAGCAGGGGAGAGACCCAGT...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATACCAAGTGTTTATAGTTaGTCTCGGCAATTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIPSVYS*SRQFPG
Trigger: TCCTGGAAATTGCCGAGAGCAACTATAAACACTTGG...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTCCAAGTGTTTATAGTTaGTCTCGGCAATTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETPSVYS*SRQFPG
Trigger: TCCTGGAAATTGCCGAGAGCAACTATAAACACTTGG...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR GCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAATGAAATACTGTCAGTaGCACAAGATGGATGGAATT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRMKYCQ*HKMDGI
Trigger: AATTCCATCCATCTTGTGGCACTGACAGTATTTCAT...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATGCTTGAAGAACCTCTaGGCCAAATCCAGTACATTT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCICLKNL*AKSSTF
Trigger: AAATGTACTGGATTTGGCCCAGAGGTTCTTCAAGCA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTGCTTGAAGAACCTCTaGGCCAAATCCAGTACATTT +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETCLKNL*AKSSTF
Trigger: AAATGTACTGGATTTGGCCCAGAGGTTCTTCAAGCA...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGACATAAATCATCCTTaGCATCAGTGCTTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRDINHP*HQCFPQ
Trigger: TTGAGGGAAGCACTGATGCCAAGGATGATTTATGTC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAAGCTTGTACTCTTaGCCACTCTTGTATATACTT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVQSLYS*PLLYIL
Trigger: AAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTG...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGTTTTCATTCATATGTaGGAGCTAAAATACGCTGGT +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQVFIHM*ELKYAG
Trigger: ACCAGCGTATTTTAGCTCCCACATATGAATGAAAAC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CCA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGTTTTCATTCATATGTaGGAGCTAAAATACGCTGGT +
Preference number: 4 (lower is better)
Translates to: FIHMWELKYAGLMKIESRVFIHM*ELKYAG
Trigger: ACCAGCGTATTTTAGCTCCCACATATGAATGAAAAC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGTGAAAGAATGTCCATaGGTTGCAGCAAGATGTAAA +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRVKECP*VAARCK
Trigger: TTTACATCTTGCTGCAACTCATGGACATTCTTTCAC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATGTGAAAGAATGTCCATaGGTTGCAGCAAGATGTAAA +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINVKECP*VAARCK
Trigger: TTTACATCTTGCTGCAACTCATGGACATTCTTTCAC...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR TCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCGTGAAAGAATGTCCATaGGTTGCAGCAAGATGTAAA +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSVKECP*VAARCK
Trigger: TTTACATCTTGCTGCAACTCATGGACATTCTTTCAC...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAAATGCTAAAGTTTCCTaGTCCTCTAGGTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCINAKVS*SSRSFP
Trigger: AGGAAAAGACCTAGAGGATCAGGAAACTTTAGCATT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR TCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGAATGCTAAAGTTTCCTaGTCCTCTAGGTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLNAKVS*SSRSFP
Trigger: AGGAAAAGACCTAGAGGATCAGGAAACTTTAGCATT...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATAAGACACACTATTTCTaGAAGCTGCTTTACATCTCC +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINKTHYF*KLLYIS
Trigger: GGAGATGTAAAGCAGCTTTCAGAAATAGTGTGTCTT...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR TCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCAAAACCCAGAGAAACTaGGGAAGTGGTTATATTTGC +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSKTQRN*GSGYIC
Trigger: GCAAATATAACCACTTCCTCAGTTTCTCTGGGTTTT...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR TCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGAAAACCCAGAGAAACTaGGGAAGTGGTTATATTTGC +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLKTQRN*GSGYIC
Trigger: GCAAATATAACCACTTCCTCAGTTTCTCTGGGTTTT...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAACTATTTCTGAAAGCTaGTTTACATCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRTISES*FTSPAR
Trigger: ACGAGCTGGAGATGTAAAGCAGCTTTCAGAAATAGT...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCACTATTTCTGAAAGCTaGTTTACATCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSTISES*FTSPAR
Trigger: ACGAGCTGGAGATGTAAAGCAGCTTTCAGAAATAGT...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTACTATTTCTGAAAGCTaGTTTACATCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETTISES*FTSPAR
Trigger: ACGAGCTGGAGATGTAAAGCAGCTTTCAGAAATAGT...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATGTCCAGCAGCTTTATaGATAGGAGTTGATCCATTA +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRCPAAL*IGVDPL
Trigger: TAATGGATCAACTCCTATGCATAAAGCTGCTGGACA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR GCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATTGTCCAGCAGCTTTATaGATAGGAGTTGATCCATTA +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINCPAAL*IGVDPL
Trigger: TAATGGATCAACTCCTATGCATAAAGCTGCTGGACA...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATGTCCAGCAGCTTTATaGATAGGAGTTGATCCATTA +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCICPAAL*IGVDPL
Trigger: TAATGGATCAACTCCTATGCATAAAGCTGCTGGACA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR GCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTGTCCAGCAGCTTTATaGATAGGAGTTGATCCATTA +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLCPAAL*IGVDPL
Trigger: TAATGGATCAACTCCTATGCATAAAGCTGCTGGACA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATCTTCTTCTGTTATaGCTCCCAAGTGTTTATAGT +
Preference number: 4 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVNLLLL*LPSVYS
Trigger: ACTATAAACACTTGGGAGGCATAACAGAAGAAGATT...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAGAGTTGATCAACTTCTaGTCGATATTCATCAAGCTG +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIELINF*SIFIKL
Trigger: CAGCTTGATGAATATCGAGCAGAAGTTGATCAACTC...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR GCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGGAGTTGATCAACTTCTaGTCGATATTCATCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLELINF*SIFIKL
Trigger: CAGCTTGATGAATATCGAGCAGAAGTTGATCAACTC...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGAGTTGATCAACTTCTaGTCGATATTCATCAAGCTG +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRELINF*SIFIKL
Trigger: CAGCTTGATGAATATCGAGCAGAAGTTGATCAACTC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTGAGTTGATCAACTTCTaGTCGATATTCATCAAGCTG +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETELINF*SIFIKL
Trigger: CAGCTTGATGAATATCGAGCAGAAGTTGATCAACTC...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATCATACTCAGCCCCCTaGATAAACTGTAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRSYSAP*INCKMF
Trigger: GAACATTTTACAGTTTATCCAGGGGGCTGAGTATGA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTCATACTCAGCCCCCTaGATAAACTGTAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLSYSAP*INCKMF
Trigger: GAACATTTTACAGTTTATCCAGGGGGCTGAGTATGA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CCA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAACAATAGCCAAAATATaGAATCAACCTAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQTIAKI*NQPKCT
Trigger: TGTGCACTTAGGTTGATTCCATATTTTGGCTATTGT...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR TCA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCTTAATAGATCAGATTTaGGGTGACACAAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TQASNRINSSMMIDEETSLIDQI*GDTSLK
Trigger: TTTGAGGCTTGTGTCACCTCAAATCTGATCTATTAA...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAAAAGCTTTTAAAACTTaGGTCGCACTGCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIKAFKT*VALLIL
Trigger: TAGAATGAGCAGTGCGACGCAAGTTTTAAAAGCTTT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR GCA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATAAAGCTTTTAAAACTTaGGTCGCACTGCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: PKACTLGHSCIYFLRKINKAFKT*VALLIL
Trigger: TAGAATGAGCAGTGCGACGCAAGTTTTAAAAGCTTT...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATGTAAGCTCTCATTCTaGCATCTGTTTTATCCAAGT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCICKLSF*HLFYPS
Trigger: ACTTGGATAAAACAGATGCCAGAATGAGAGCTTACA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTGTAAGCTCTCATTCTaGCATCTGTTTTATCCAAGT +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLCKLSF*HLFYPS
Trigger: ACTTGGATAAAACAGATGCCAGAATGAGAGCTTACA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR CCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTCAAAGCTTGTACTCTTaGCCACTCTTGTATATACTT +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETQSLYS*PLLYIL
Trigger: AAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTG...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAATTTTAATTAACCACTaGAAACACTCTATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIILINH*KHSMWP
Trigger: AGGCCACATAGAGTGTTTGCAGTGGTTAATTAAAAT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR GCA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTATTTTAATTAACCACTaGAAACACTCTATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VTQASNRINSSMMIDEETILINH*KHSMWP
Trigger: AGGCCACATAGAGTGTTTGCAGTGGTTAATTAAAAT...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGATTTTAATTAACCACTaGAAACACTCTATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLILINH*KHSMWP
Trigger: AGGCCACATAGAGTGTTTGCAGTGGTTAATTAAAAT...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR GCA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAAATCTTCTTCTGTTATaGCTCCCAAGTGTTTATAGT +
Preference number: 4 (lower is better)
Translates to: ITFLPSELEQKHIRVILRNLLLL*LPSVYS
Trigger: ACTATAAACACTTGGGAGGCATAACAGAAGAAGATT...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS GCA 90 bp TATCCTCCACACGTGGTGGCTAGTGCGGCGGCCACCGTCTTCGTCTaGTACTCCCTGCGAATCGCCGTAGCGGCGGCCGCCTTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: YPPHVVASAAATVFV*YSLRIAVAAAAFRW
Trigger: CCAGCGGAAGGCGGCCGCCGCTACGGCGATTCGCAGGGAGTAGCAGACGAAGACGGTGGCCGCCGCACTAGCCACCACGTGTGGAGGATA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS CCA 90 bp GGGCCTGAATTGGCCACCCCGGGCATGGCGCAACACCTCCGACTCTaGGGAGGAGTTGAGTCCAGGCCCCTGATGCTGCGGCGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GPELATPGMAQHLRL*GGVESRPLMLRRSS
Trigger: TGAAGACCGCCGCAGCATCAGGGGCCTGGACTCAACTCCTCCCCAGAGTCGGAGGTGTTGCGCCATGCCCGGGGTGGCCAATTCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000531895.5
ENST00000533342.6
CDS TCA 90 bp TGGCGCAACACCTCCGACTCTGGGGAGGAGTTGAGTCCAGGCCCCTaGTGCTGCGGCGGTCTTCACTTGCTCTCACCCACGAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: WRNTSDSGEELSPGP*CCGGLHLLSPTSHC
Trigger: GCAGTGGCTCGTGGGTGAGAGCAAGTGAAGACCGCCGCAGCATCAGGGGCCTGGACTCAACTCCTCCCCAGAGTCGGAGGTGTTGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000531895.5
ENST00000533342.6
CDS CCA 90 bp GTCTGCTACTCCCTGCGAATCGCCGTAGCGGCGGCCGCCTTCCGCTaGTACTTTCTCGGAGTCTCTTTCCAGCCTCCCGACTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: VCYSLRIAVAAAAFR*YFLGVSFQPPDSSH
Trigger: GTGGCTGGAGTCGGGAGGCTGGAAAGAGACTCCGAGAAAGTACCAGCGGAAGGCGGCCGCCGCTACGGCGATTCGCAGGGAGTAGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS CCA 90 bp GACTCGGCGCCGGAATGGCCGTGTAGACCGTTTATCCTCCACACGTaGTGGCTAGTGCGGCGGCCACCGTCTTCGTCTGCTACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: DSAPEWPCRPFILHT*WLVRRPPSSSATPC
Trigger: GCAGGGAGTAGCAGACGAAGACGGTGGCCGCCGCACTAGCCACCACGTGTGGAGGATAAACGGTCTACACGGCCATTCCGGCGCCGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS CCA 90 bp TGCGGGAGAAGCCGGCGTCTGCACTTAGGCTTCCTGCAGCGACCCTaGAGCGGCGGTCGCTCTCTTCACATTTTCTTTCCCCGTCGTCGC +
Preference number: 5 (lower is better)
Translates to: CGRSRRLHLGFLQRP*SGGRSLHIFFPRRR
Trigger: GCGACGACGGGGAAAGAAAATGTGAAGAGAGCGACCGCCGCTCCAGGGTCGCTGCAGGAAGCCTAAGTGCAGACGCCGGCTTCTCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS CCA 90 bp TCGGCGCCGGAATGGCCGTGTAGACCGTTTATCCTCCACACGTGGTaGCTAGTGCGGCGGCCACCGTCTTCGTCTGCTACTCCCTGCGAA +
Preference number: 5 (lower is better)
Translates to: SAPEWPCRPFILHTW*LVRRPPSSSATPCE
Trigger: TTCGCAGGGAGTAGCAGACGAAGACGGTGGCCGCCGCACTAGCCACCACGTGTGGAGGATAAACGGTCTACACGGCCATTCCGGCGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS CCA 90 bp AGCGGTAGCTGGCGTCTTCACTGCCGCTCACACCAGAGGAGTCGCTaGCTGCGTAGCCGCGGTCTCCACTTACTTCCTCCCAAGAACTAC +
Preference number: 5 (lower is better)
Translates to: SGSWRLHCRSHQRSR*LRSRGLHLLPPKNY
Trigger: GTAGTTCTTGGGAGGAAGTAAGTGGAGACCGCGGCTACGCAGCCAGCGACTCCTCTGGTGTGAGCGGCAGTGAAGACGCCAGCTACCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000533342.6
CDS CCA 90 bp CTTTCCCCGTCGTCGCTAACTCTTTCCCTAGACTCGGCGCCGGAATaGCCGTGTAGACCGTTTATCCTCCACACGTGGTGGCTAGTGCGG +
Preference number: 5 (lower is better)
Translates to: LSPSSLTLSLDSAPE*PCRPFILHTWWLVR
Trigger: CCGCACTAGCCACCACGTGTGGAGGATAAACGGTCTACACGGCCATTCCGGCGCCGAGTCTAGGGAAAGAGTTAGCGACGACGGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS GCA 90 bp GCCCTCTTCTCCGTCGTCACTAGGACGGGGCCCAAGGTCCTCTCTTaGTCTCTCCCAGAAGCTGCAGCGGAAACCTTCGTCTTCACTTTC +
Preference number: 5 (lower is better)
Translates to: ALFSVVTRTGPKVLS*SLPEAAAETFVFTF
Trigger: GAAAGTGAAGACGAAGGTTTCCGCTGCAGCTTCTGGGAGAGAGCAAGAGAGGACCTTGGGCCCCGTCCTAGTGACGACGGAGAAGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000531895.5
ENST00000533342.6
CDS CCA 90 bp TGGCCACTATCTCCCCTAACTCTCTCCCTAGAGACGCTGCGGCAGTaGCCGAGGTTTTCACTGACCCTTCTCAAGTCACTGCGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: WPLSPLTLSLETLRQ*PRFSLTLLKSLREK
Trigger: CTTCTCCCGCAGTGACTTGAGAAGGGTCAGTGAAAACCTCGGCCACTGCCGCAGCGTCTCTAGGGAGAGAGTTAGGGGAGATAGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000533342.6
CDS CCA 90 bp CGGAGGCCTCGGTCTTCTCTGGCTGTTCCCCTGGAGTCGGTAGTTTaGTGGCCTCCAACTTCACTAAAATTCACGTCGCTGCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: RRPRSSLAVPLESVV*WPPTSLKFTSLLQK
Trigger: CTTCTGCAGCAGCGACGTGAATTTTAGTGAAGTTGGAGGCCACCAAACTACCGACTCCAGGGGAACAGCCAGAGAAGACCGAGGCCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000533342.6
CDS TCA 90 bp TGCAGCGGAAACCTTCGTCTTCACTTTCTCTCTCCCAAAAGCCACTaGAGCGGTAGCTGGCGTCTTCACTGCCGCTCACACCAGAGGAGT +
Preference number: 5 (lower is better)
Translates to: CSGNLRLHFLSPKSH*SGSWRLHCRSHQRS
Trigger: ACTCCTCTGGTGTGAGCGGCAGTGAAGACGCCAGCTACCGCTTCAGTGGCTTTTGGGAGAGAGAAAGTGAAGACGAAGGTTTCCGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000531895.5
ENST00000533342.6
CDS CCA 90 bp AGGCCTCGGTCTTCTCTGGCTGTTCCCCTGGAGTCGGTAGTTTGGTaGCCTCCAACTTCACTAAAATTCACGTCGCTGCTGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: RPRSSLAVPLESVVW*PPTSLKFTSLLQKV
Trigger: CACCTTCTGCAGCAGCGACGTGAATTTTAGTGAAGTTGGAGGCCACCAAACTACCGACTCCAGGGGAACAGCCAGAGAAGACCGAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000533342.6
CDS-3UTR CAA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGATGCGGCGGTCTTCACTaGCTCTCACCCACGAGCCAC +
Preference number: 5 (lower is better)
Translates to: PNYVSPACQAKESEAPQGCGGLH*LSPTSH
Trigger: GTGGCTCGTGGGTGAGAGCAAGTGAAGACCGCCGCA...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CAA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGACCTGGAGTCGGTAGTTaGGTGGCCTCCAACTTCACT +
Preference number: 5 (lower is better)
Translates to: PNYVSPACQAKESEAPQGPGVGS*VASNFT
Trigger: AGTGAAGTTGGAGGCCACCAAACTACCGACTCCAGG...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS-3UTR CAA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAGTGGAGGGGCCTGAATaGGCCACCCCGGGCATGGCG +
Preference number: 5 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQVEGPE*ATPGMA
Trigger: CGCCATGCCCGGGGTGGCCAATTCAGGCCCCTCCAC...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CAA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAGTGGAGGGGCCTGAATaGGCCACCCCGGGCATGGCG +
Preference number: 5 (lower is better)
Translates to: FIHMWELKYAGLMKIESRVEGPE*ATPGMA
Trigger: CGCCATGCCCGGGGTGGCCAATTCAGGCCCCTCCAC...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CAA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGCCATTTAACAAGAAGTaGCAAGCAGCCAAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: VPNYVSPACQAKESEAPQPFNKK*QAAKPP
Trigger: GGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATGG...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS GCA 90 bp AGCCTGTACACAAGCATCCTGACCCCTGATTGCAGCTATGTGAGATaGTGTCCAACCTCTCGTTGTTACGTGTGTGATATCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: SLYTSILTPDCSYVR*CPTSRCYVCDISSM
Trigger: CATGGAGCTGATATCACACACGTAACAACGAGAGGTTGGACAGCATCTCACATAGCTGCAATCAGGGGTCAGGATGCTTGTGTACAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS-3UTR CAA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGTGGAGGGGCCTGAATaGGCCACCCCGGGCATGGCG +
Preference number: 5 (lower is better)
Translates to: ITFLPSELEQKHIRVILRVEGPE*ATPGMA
Trigger: CGCCATGCCCGGGGTGGCCAATTCAGGCCCCTCCAC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CAA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCGTGGAGGGGCCTGAATaGGCCACCCCGGGCATGGCG +
Preference number: 5 (lower is better)
Translates to: TQASNRINSSMMIDEETSVEGPE*ATPGMA
Trigger: CGCCATGCCCGGGGTGGCCAATTCAGGCCCCTCCAC...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTGTGGAGGGGCCTGAATaGGCCACCCCGGGCATGGCG +
Preference number: 5 (lower is better)
Translates to: VTQASNRINSSMMIDEETVEGPE*ATPGMA
Trigger: CGCCATGCCCGGGGTGGCCAATTCAGGCCCCTCCAC...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS TCA 90 bp TTGCAGCTATGTGAGATGCTGTCCAACCTCTCGTTGTTACGTGTGTaGTATCAGCTCCATGCCAGAGCAGCCAATGAAGACACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: LQLCEMLSNLSLLRV*YQLHARAANEDTPN
Trigger: GTTTGGAGTGTCTTCATTGGCTGCTCTGGCATGGAGCTGATATCACACACGTAACAACGAGAGGTTGGACAGCATCTCACATAGCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS-3UTR CAA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCAATGGGCAAACCTCTTaGCCACATCACTGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFNGQTS*PHHWVS
Trigger: AGAGACCCAGTGATGTGGCAAAGAGGTTTGCCCATT...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CAA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTCCCGACTCCAGCCACTaGGCTGGAGAGGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: VTQASNRINSSMMIDEETPDSSH*AGEAAG
Trigger: CCCTGCTGCCTCTCCAGCCAAGTGGCTGGAGTCGGG...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS GCA 90 bp CCATTTAACAAGAAGTTGCAAGCAGCCAAGCCGCCCATGAAAAGCTaGATAATGCACAGGTCTCCATTCTCTCTTATCAGTCACACTGGG +
Preference number: 5 (lower is better)
Translates to: PFNKKLQAAKPPMKS*IMHRSPFSLISHTG
Trigger: CCCAGTGTGACTGATAAGAGAGAATGGAGACCTGTGCATTATGCAGCTTTTCATGGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS TCA 90 bp GGATCTCCACTTCGGAGCATTATTTGTAAAGTGAAAGAATGTCCATaGGTTGCAGCAAGATGTAAAGGAGTGCATCCCCGGTCATCCTGG +
Preference number: 5 (lower is better)
Translates to: GSPLRSIICKVKECP*VAARCKGVHPRSSW
Trigger: CCAGGATGACCGGGGATGCACTCCTTTACATCTTGCTGCAACTCATGGACATTCTTTCACTTTACAAATAATGCTCCGAAGTGGAGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS TCA 90 bp TTGCAGCTATGTGAGATGCTGTCCAACCTCTCGTTGTTACGTGTGTaGTATCAGCTCCATGCCAGAGCAGCCAATGAAGACACACTATTT +
Preference number: 5 (lower is better)
Translates to: LQLCEMLSNLSLLRV*YQLHARAANEDTLF
Trigger: AAATAGTGTGTCTTCATTGGCTGCTCTGGCATGGAGCTGATATCACACACGTAACAACGAGAGGTTGGACAGCATCTCACATAGCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS TCA 90 bp TCCACTCCACTTCGGAGCATTATTTGTAAAGTGAAAGAATGTCCATaGGTTGCAGCAAGATGTAAAGGAGTGCATCCCCGGTCATCCTGG +
Preference number: 5 (lower is better)
Translates to: STPLRSIICKVKECP*VAARCKGVHPRSSW
Trigger: CCAGGATGACCGGGGATGCACTCCTTTACATCTTGCTGCAACTCATGGACATTCTTTCACTTTACAAATAATGCTCCGAAGTGGAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS GCA 90 bp TCCATTCATTATAAGAGCCTGTACACAAGCATCCTGACCCCTGATTaGAGCTATGTGAGATGCTGTCCAACCTCTCGTTGTTACGTGTGT +
Preference number: 5 (lower is better)
Translates to: SIHYKSLYTSILTPD*SYVRCCPTSRCYVC
Trigger: ACACACGTAACAACGAGAGGTTGGACAGCATCTCACATAGCTGCAATCAGGGGTCAGGATGCTTGTGTACAGGCTCTTATAATGAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS-3UTR CAA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATGCGGCGGTCTTCACTaGCTCTCACCCACGAGCCAC +
Preference number: 5 (lower is better)
Translates to: ITFLPSELEQKHIRVILRCGGLH*LSPTSH
Trigger: GTGGCTCGTGGGTGAGAGCAAGTGAAGACCGCCGCA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CAA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGAAGAATGTCCATGAGTaGCAGCAAGATGTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: VPNYVSPACQAKESEAPQKNVHE*QQDVKE
Trigger: CTCCTTTACATCTTGCTGCAACTCATGGACATTCTT...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000528722.5
CDS-3UTR CAA 90 bp GGATTCAAGTCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTGCACGCTCATTAATATaGATTACTCCATCTTCCACT +
Preference number: 5 (lower is better)
Translates to: GFKSKEPQPKACTLGHSCARSLI*ITPSST
Trigger: AGTGGAAGATGGAGTAATCAATATTAATGAGCGTGC...ACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGACTTGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CAA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCAAGAATGTCCATGAGTaGCAGCAAGATGTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFKNVHE*QQDVKE
Trigger: CTCCTTTACATCTTGCTGCAACTCATGGACATTCTT...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CAA 90 bp TCCAAAGAGCCCCAGCCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCGAACTAGGCTGCTGTTaGAAGATAGATAGACAGATG +
Preference number: 5 (lower is better)
Translates to: SKEPQPKACTLGHSCIYFELGCC*KIDRQM
Trigger: CATCTGTCTATCTATCTTCAAACAGCAGCCTAGTTC...GAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGGCTGGGGCTCTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CAA 90 bp GTGCCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGAAGATAGAGAGTAGATaGATTGGCGATTACCAAAGG +
Preference number: 5 (lower is better)
Translates to: VPNYVSPACQAKESEAPQKIESR*IGDYQR
Trigger: CCTTTGGTAATCGCCAATCAATCTACTCTCTATCTT...CTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS TCA 90 bp CAGTCACACTGGGATCCACTCCACTTCGGAGCATTATTTGTAAAGTaGAAGAATGTCCATGAGTTGCAGCAAGATGTAAAGGAGTGCATC +
Preference number: 5 (lower is better)
Translates to: QSHWDPLHFGALFVK*KNVHELQQDVKECI
Trigger: GATGCACTCCTTTACATCTTGCTGCAACTCATGGACATTCTTTCACTTTACAAATAATGCTCCGAAGTGGAGTGGATCCCAGTGTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS-3UTR CAA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGACCATTTAACAAGAAGTaGCAAGCAGCCAAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: FIHMWELKYAGLMKIESRPFNKK*QAAKPP
Trigger: GGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATGG...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CAA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCATTTAACAAGAAGTaGCAAGCAGCCAAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVPFNKK*QAAKPP
Trigger: GGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATGG...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAACCATTTAACAAGAAGTaGCAAGCAGCCAAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQPFNKK*QAAKPP
Trigger: GGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATGG...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CAA 90 bp CCAAATTATGTAAGTCCAGCATGCCAAGCCAAGGAATCAGAGGCTCCACAGGGAACAAGATGGATGGAATaGGAGGTCATTATGTTAAGT +
Preference number: 5 (lower is better)
Translates to: PNYVSPACQAKESEAPQGTRWME*EVIMLS
Trigger: ACTTAACATAATGACCTCCAATTCCATCCATCTTGT...TCCCTGTGGAGCCTCTGATTCCTTGGCTTGGCATGCTGGACTTACATAATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393389.7
CDS TCA 90 bp GAGAACATCAAGTTCATTAATGCTGGCTCCACGTACCACTATTTCTaGAAGCTGCTTTACATCTCCAGCTCGTACTGCATCATGTATGCT +
Preference number: 5 (lower is better)
Translates to: ENIKFINAGSTYHYF*KLLYISSSYCIMYA
Trigger: AGCATACATGATGCAGTACGAGCTGGAGATGTAAAGCAGCTTTCAGAAATAGTGGTACGTGGAGCCAGCATTAATGAACTTGATGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS GCA 90 bp TCAAGTTCATTAATGCTGGCTCCACGTACCACTATTTCTGAAAGCTaGTTTACATCTCCAGCTCGTACTGCATCATGTATGCTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SSSLMLAPRTTISES*FTSPARTASCMLPK
Trigger: TTTTGGCAGCATACATGATGCAGTACGAGCTGGAGATGTAAAGCAGCTTTCAGAAATAGTGGTACGTGGAGCCAGCATTAATGAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS-3UTR CAA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGACCTGGAGTCGGTAGTTaGGTGGCCTCCAACTTCACT +
Preference number: 5 (lower is better)
Translates to: ITFLPSELEQKHIRVILRPGVGS*VASNFT
Trigger: AGTGAAGTTGGAGGCCACCAAACTACCGACTCCAGG...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CAA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTCCTGGAGTCGGTAGTTaGGTGGCCTCCAACTTCACT +
Preference number: 5 (lower is better)
Translates to: VTQASNRINSSMMIDEETPGVGS*VASNFT
Trigger: AGTGAAGTTGGAGGCCACCAAACTACCGACTCCAGG...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS TCA 90 bp TATCAGTCACACTGGGATCTCCACTTCGGAGCATTATTTGTAAAGTaGAAGAATGTCCATGAGTTGCAGCAAGATGTAAAGGAGTGCATC +
Preference number: 5 (lower is better)
Translates to: YQSHWDLHFGALFVK*KNVHELQQDVKECI
Trigger: GATGCACTCCTTTACATCTTGCTGCAACTCATGGACATTCTTTCACTTTACAAATAATGCTCCGAAGTGGAGATCCCAGTGTGACTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS GCA 90 bp GTAACAAAGTATACTGCATTTGTTCAGTTAACCAATATGACTGCCTaGTATATGCCAAACAGCATGCTAGTCCCTGTGTGCACAGAGATG +
Preference number: 5 (lower is better)
Translates to: VTKYTAFVQLTNMTA*YMPNSMLVPVCTEM
Trigger: CATCTCTGTGCACACAGGGACTAGCATGCTGTTTGGCATATAGCAGGCAGTCATATTGGTTAACTGAACAAATGCAGTATACTTTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528190.1
CDS CCA 90 bp TCCAAACTTCCAGAATGTGCTGCCCAATGTAAAGGGGTAAACTTATaGAGAACATCAAGTTCATTAATGCTGGCTCCACGTACCACTATT +
Preference number: 5 (lower is better)
Translates to: SKLPECAAQCKGVNL*RTSSSLMLAPRTTI
Trigger: AATAGTGGTACGTGGAGCCAGCATTAATGAACTTGATGTTCTCCATAAGTTTACCCCTTTACATTGGGCAGCACATTCTGGAAGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATACCATTTAACAAGAAGTaGCAAGCAGCCAAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIPFNKK*QAAKPP
Trigger: GGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATGG...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CAA 90 bp CCCAAAGCTTGTACTCTTGGCCACTCTTGTATATACTTCTTGAGAAAAATAAATTGGCCCTGCAGTTCTTaGATGGTCTTCTGGCATCTG +
Preference number: 5 (lower is better)
Translates to: PKACTLGHSCIYFLRKINWPCSS*MVFWHL
Trigger: CAGATGCCAGAAGACCATCAAAGAACTGCAGGGCCA...ATTTATTTTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTACAAGCTTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATGGCCCTGCAGTTCTTaGATGGTCCTCTTTGCCACA +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIWPCSS*MVLFAT
Trigger: TGTGGCAAAGAGGACCATCAAAGAACTGCAGGGCCA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531815.1
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAAATGGGCAAACCTCTTaGCCACATCACTGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCINGQTS*PHHWVS
Trigger: AGAGACCCAGTGATGTGGCAAAGAGGTTTGCCCATT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CAA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCAATGGGCAAACCTCTTaGCCACATCACTGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: TQASNRINSSMMIDEETSNGQTS*PHHWVS
Trigger: AGAGACCCAGTGATGTGGCAAAGAGGTTTGCCCATT...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGTGTTTCCCTGAGTaGATCAACTTCTGCTCGATA +
Preference number: 5 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVQCFPE*INFCSI
Trigger: TATCGAGCAGAAGTTGATCAACTCAGGGAAACACTG...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAAAGAATGTCCATGAGTaGCAGCAAGATGTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: FIHMWELKYAGLMKIESRKNVHE*QQDVKE
Trigger: CTCCTTTACATCTTGCTGCAACTCATGGACATTCTT...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CAA 90 bp AAAGTTATAGTTACATATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAATGTTCTGCTaGAAGAACCTCTGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: KVIVTYRVCVCVCVCVCVCKMFC*KNLWAK
Trigger: TTTGGCCCAGAGGTTCTTCAAGCAGAACATTTTACA...CACACACACACACACACACACACACACACACACTCTATATGTAACTATAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAACACTCTATGTGGCCTaGTCCAGCAGCTTTATGCAT +
Preference number: 5 (lower is better)
Translates to: ITFLPSELEQKHIRVILRTLYVA*SSSFMH
Trigger: ATGCATAAAGCTGCTGGACAAGGCCACATAGAGTGT...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CAA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGACACTCTATGTGGCCTaGTCCAGCAGCTTTATGCAT +
Preference number: 5 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLTLYVA*SSSFMH
Trigger: ATGCATAAAGCTGCTGGACAAGGCCACATAGAGTGT...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAACACTCTATGTGGCCTaGTCCAGCAGCTTTATGCAT +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCITLYVA*SSSFMH
Trigger: ATGCATAAAGCTGCTGGACAAGGCCACATAGAGTGT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CAA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTACACTCTATGTGGCCTaGTCCAGCAGCTTTATGCAT +
Preference number: 5 (lower is better)
Translates to: VTQASNRINSSMMIDEETTLYVA*SSSFMH
Trigger: ATGCATAAAGCTGCTGGACAAGGCCACATAGAGTGT...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATGGCCCTGCAGTTCTTaGATGGTCTTTTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: ITFLPSELEQKHIRVILRWPCSS*MVFSDS
Trigger: TGAGTCTGAAAAGACCATCAAAGAACTGCAGGGCCA...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CAA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTGGCCCTGCAGTTCTTaGATGGTCTTTTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLWPCSS*MVFSDS
Trigger: TGAGTCTGAAAAGACCATCAAAGAACTGCAGGGCCA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533342.6
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAGCCTCTTCTCTTTGTTaGACTCACAAGAAGCGCTGT +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIASSLC*THKKRC
Trigger: ACAGCGCTTCTTGTGAGTCAAACAAAGAGAAGAGGC...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAACTCGCCTCTTCTCTTaGTTTGACTCACAAGAAGCG +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCITRLFS*FDSQEA
Trigger: CGCTTCTTGTGAGTCAAACAAAGAGAAGAGGCGAGT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CAA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAACTCGCCTCTTCTCTTaGTTTGACTCACAAGAAGCG +
Preference number: 5 (lower is better)
Translates to: ITFLPSELEQKHIRVILRTRLFS*FDSQEA
Trigger: CGCTTCTTGTGAGTCAAACAAAGAGAAGAGGCGAGT...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS GCA 90 bp TCTGCTTTAAATCTTCTTCTGTTATGCCTCCCAAGTGTTTATAGTTaGTCTCGGCAATTTCCAGGAGGTGTCTCAATTCTACAATTTTCT +
Preference number: 5 (lower is better)
Translates to: SALNLLLLCLPSVYS*SRQFPGGVSILQFS
Trigger: AGAAAATTGTAGAATTGAGACACCTCCTGGAAATTGCCGAGAGCAACTATAAACACTTGGGAGGCATAACAGAAGAAGATTTAAAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260047.10
ENST00000531895.5
ENST00000533342.6
CDS-3UTR CAA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGGTCTCTCCCCTGCTTaGTTGGTAATATTACTGTCT +
Preference number: 5 (lower is better)
Translates to: ITFLPSELEQKHIRVILRGLSPA*LVILLS
Trigger: AGACAGTAATATTACCAACAAAGCAGGGGAGAGACC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CAA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCGGTCTCTCCCCTGCTTaGTTGGTAATATTACTGTCT +
Preference number: 5 (lower is better)
Translates to: TQASNRINSSMMIDEETSGLSPA*LVILLS
Trigger: AGACAGTAATATTACCAACAAAGCAGGGGAGAGACC...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAGGTCTCTCCCCTGCTTaGTTGGTAATATTACTGTCT +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIGLSPA*LVILLS
Trigger: AGACAGTAATATTACCAACAAAGCAGGGGAGAGACC...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CAA 90 bp GTGACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTGGTCTCTCCCCTGCTTaGTTGGTAATATTACTGTCT +
Preference number: 5 (lower is better)
Translates to: VTQASNRINSSMMIDEETGLSPA*LVILLS
Trigger: AGACAGTAATATTACCAACAAAGCAGGGGAGAGACC...AGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAAGACATAAATCATCCTaGGCATCAGTGCTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIRHKSS*ASVLPS
Trigger: TGAGGGAAGCACTGATGCCAAGGATGATTTATGTCT...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CAA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCAGACATAAATCATCCTaGGCATCAGTGCTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: TQASNRINSSMMIDEETSRHKSS*ASVLPS
Trigger: TGAGGGAAGCACTGATGCCAAGGATGATTTATGTCT...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGAGACATAAATCATCCTaGGCATCAGTGCTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLRHKSS*ASVLPS
Trigger: TGAGGGAAGCACTGATGCCAAGGATGATTTATGTCT...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATACAGTGTTTCCCTGAGTaGATCAACTTCTGCTCGATA +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIQCFPE*INFCSI
Trigger: TATCGAGCAGAAGTTGATCAACTCAGGGAAACACTG...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CAA 90 bp CTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGATTGATTGGCGATTACCAAAAGATAGAGAGTAGATaGATTGGCGATTACCAAAGG +
Preference number: 5 (lower is better)
Translates to: LKYAGLMKIESRLIGDYQKIESR*IGDYQR
Trigger: CCTTTGGTAATCGCCAATCAATCTACTCTCTATCTT...TTGGTAATCGCCAATCAATCTACTCTCTATCTTCATGAGACCAGCGTATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CAA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAAAGAATGTCCATGAGTaGCAGCAAGATGTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: ITFLPSELEQKHIRVILRKNVHE*QQDVKE
Trigger: CTCCTTTACATCTTGCTGCAACTCATGGACATTCTT...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CAA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCAAGAATGTCCATGAGTaGCAGCAAGATGTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: TQASNRINSSMMIDEETSKNVHE*QQDVKE
Trigger: CTCCTTTACATCTTGCTGCAACTCATGGACATTCTT...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATGTAAAATGTTCTGCTaGAAGAACCTCTGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCICKMFC*KNLWAK
Trigger: TTTGGCCCAGAGGTTCTTCAAGCAGAACATTTTACA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS-3UTR CAA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTGTAAAATGTTCTGCTaGAAGAACCTCTGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLCKMFC*KNLWAK
Trigger: TTTGGCCCAGAGGTTCTTCAAGCAGAACATTTTACA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGGAACTAGGCTGCTGTTaGAAGATAGATAGACAGATG +
Preference number: 5 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLELGCC*KIDRQM
Trigger: CATCTGTCTATCTATCTTCAAACAGCAGCCTAGTTC...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp TTCATTCATATGTGGGAGCTAAAATACGCTGGTCTCATGAAGATAGAGAGTAGAACAAGATGGATGGAATaGGAGGTCATTATGTTAAGT +
Preference number: 5 (lower is better)
Translates to: FIHMWELKYAGLMKIESRTRWME*EVIMLS
Trigger: ACTTAACATAATGACCTCCAATTCCATCCATCTTGT...TCTACTCTCTATCTTCATGAGACCAGCGTATTTTAGCTCCCACATATGAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393389.7
ENST00000526731.5
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATAGCACGCTCATTAATATaGATTACTCCATCTTCCACT +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIARSLI*ITPSST
Trigger: AGTGGAAGATGGAGTAATCAATATTAATGAGCGTGC...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CAA 90 bp ATAACATTTCTGCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGAGCACGCTCATTAATATaGATTACTCCATCTTCCACT +
Preference number: 5 (lower is better)
Translates to: ITFLPSELEQKHIRVILRARSLI*ITPSST
Trigger: AGTGGAAGATGGAGTAATCAATATTAATGAGCGTGC...TCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAATGTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CAA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCGCACGCTCATTAATATaGATTACTCCATCTTCCACT +
Preference number: 5 (lower is better)
Translates to: TQASNRINSSMMIDEETSARSLI*ITPSST
Trigger: AGTGGAAGATGGAGTAATCAATATTAATGAGCGTGC...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp GCCATCAGAATTGGAACAGAAGCATATCAGAGTAATTCTGAGATAGTTTGTATATTTCTGCCATCAGAATaGGAACAGAAGCATATCAGA +
Preference number: 5 (lower is better)
Translates to: AIRIGTEAYQSNSEIVCIFLPSE*EQKHIR
Trigger: TCTGATATGCTTCTGTTCCAATTCTGATGGCAGAAA...TATACAAACTATCTCAGAATTACTCTGATATGCTTCTGTTCCAATTCTGATGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260047.10
ENST00000531815.1
CDS-3UTR CAA 90 bp ACACAAGCCTCAAACAGAATTAATTCATCCATGATGATTGATGAAGAAACTTCCTACTCTTGGCCACTCTaGTATATACTTCTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: TQASNRINSSMMIDEETSYSWPL*YILLEK
Trigger: TTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTA...GGAAGTTTCTTCATCAATCATCATGGATGAATTAATTCTGTTTGAGGCTTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS-3UTR CAA 90 bp CTCCTTCTATGGTACAATGTTAACAATAATACTTATGAACTAGGCTGCTGTTTGTACTCTTGGCCACTCTaGTATATACTTCTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: LLLWYNVNNNTYELGCCLYSWPL*YILLEK
Trigger: TTTCTCAAGAAGTATATACAAGAGTGGCCAAGAGTA...CAAACAGCAGCCTAGTTCATAAGTATTATTGTTAACATTGTACCATAGAAGGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393392.6
ENST00000533342.6
CDS GCA 72 bp CACGTGGTGGCTAGTGCGGCGGCCACCGTCTTCGTCTaGTACTCCCTGCGAATCGCCGTAGCGGCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: HVVASAAATVFV*YSLRIAVAAAA
Trigger: GGCGGCCGCCGCTACGGCGATTCGCAGGGAGTAGCAGACGAAGACGGTGGCCGCCGCACTAGCCACCACGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS TCA 72 bp GGGCATGGCGCAACACCTCCGACTCTGGGGAGGAGTTaGGTCCAGGCCCCTGATGCTGCGGCGGTCTTCACT +
Preference number: 6 (lower is better)
Translates to: GHGATPPTLGRS*VQAPDAAAVFT
Trigger: AGTGAAGACCGCCGCAGCATCAGGGGCCTGGACTCAACTCCTCCCCAGAGTCGGAGGTGTTGCGCCATGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000531895.5
ENST00000533342.6
CDS CCA 72 bp TCCCTGCGAATCGCCGTAGCGGCGGCCGCCTTCCGCTaGTACTTTCTCGGAGTCTCTTTCCAGCCTCCCGAC +
Preference number: 6 (lower is better)
Translates to: SLRIAVAAAAFR*YFLGVSFQPPD
Trigger: GTCGGGAGGCTGGAAAGAGACTCCGAGAAAGTACCAGCGGAAGGCGGCCGCCGCTACGGCGATTCGCAGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS CCA 72 bp TGGCGTCTTCACTGCCGCTCACACCAGAGGAGTCGCTaGCTGCGTAGCCGCGGTCTCCACTTACTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: WRLHCRSHQRSR*LRSRGLHLLPP
Trigger: GGGAGGAAGTAAGTGGAGACCGCGGCTACGCAGCCAGCGACTCCTCTGGTGTGAGCGGCAGTGAAGACGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000533342.6
CDS CCA 72 bp CCGGAATGGCCGTGTAGACCGTTTATCCTCCACACGTaGTGGCTAGTGCGGCGGCCACCGTCTTCGTCTGCT +
Preference number: 6 (lower is better)
Translates to: PEWPCRPFILHT*WLVRRPPSSSA
Trigger: AGCAGACGAAGACGGTGGCCGCCGCACTAGCCACCACGTGTGGAGGATAAACGGTCTACACGGCCATTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS GCA 72 bp GTCTTCACTGCCGCTCACACCAGAGGAGTCGCTGGCTaGGTAGCCGCGGTCTCCACTTACTTCCTCCCAAGA +
Preference number: 6 (lower is better)
Translates to: VFTAAHTRGVAG*VAAVSTYFLPR
Trigger: TCTTGGGAGGAAGTAAGTGGAGACCGCGGCTACGCAGCCAGCGACTCCTCTGGTGTGAGCGGCAGTGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000533342.6
CDS GCA 72 bp TCCGTCGTCACTAGGACGGGGCCCAAGGTCCTCTCTTaGTCTCTCCCAGAAGCTGCAGCGGAAACCTTCGTC +
Preference number: 6 (lower is better)
Translates to: SVVTRTGPKVLS*SLPEAAAETFV
Trigger: GACGAAGGTTTCCGCTGCAGCTTCTGGGAGAGAGCAAGAGAGGACCTTGGGCCCCGTCCTAGTGACGACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000531895.5
ENST00000533342.6
CDS CCA 72 bp AGCCGGCGTCTGCACTTAGGCTTCCTGCAGCGACCCTaGAGCGGCGGTCGCTCTCTTCACATTTTCTTTCCC +
Preference number: 6 (lower is better)
Translates to: SRRLHLGFLQRP*SGGRSLHIFFP
Trigger: GGGAAAGAAAATGTGAAGAGAGCGACCGCCGCTCCAGGGTCGCTGCAGGAAGCCTAAGTGCAGACGCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS CCA 72 bp GAATGGCCGTGTAGACCGTTTATCCTCCACACGTGGTaGCTAGTGCGGCGGCCACCGTCTTCGTCTGCTACT +
Preference number: 6 (lower is better)
Translates to: EWPCRPFILHTW*LVRRPPSSSAT
Trigger: AGTAGCAGACGAAGACGGTGGCCGCCGCACTAGCCACCACGTGTGGAGGATAAACGGTCTACACGGCCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS GCA 72 bp GGGGCCCAAGGTCCTCTCTTGCTCTCTCCCAGAAGCTaGAGCGGAAACCTTCGTCTTCACTTTCTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: GAQGPLLLSPRS*SGNLRLHFLSP
Trigger: GGGAGAGAGAAAGTGAAGACGAAGGTTTCCGCTGCAGCTTCTGGGAGAGAGCAAGAGAGGACCTTGGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000531895.5
ENST00000533342.6
CDS CCA 72 bp TCGTCGCTAACTCTTTCCCTAGACTCGGCGCCGGAATaGCCGTGTAGACCGTTTATCCTCCACACGTGGTGG +
Preference number: 6 (lower is better)
Translates to: SSLTLSLDSAPE*PCRPFILHTWW
Trigger: CCACCACGTGTGGAGGATAAACGGTCTACACGGCCATTCCGGCGCCGAGTCTAGGGAAAGAGTTAGCGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393389.7
ENST00000528722.5
ENST00000533342.6
CDS CAA 90 bp GCGGAGGCCTCGGTCTTCTCTGGCTGTTCCCCTGGAGTCGGTAGTTaGGTGGCCTCCAACTTCACTAAAATTCACGTCGCTGCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: AEASVFSGCSPGVGS*VASNFTKIHVAAAE
Trigger: TTCTGCAGCAGCGACGTGAATTTTAGTGAAGTTGGAGGCCACCAAACTACCGACTCCAGGGGAACAGCCAGAGAAGACCGAGGCCTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000533342.6
CDS GCA 72 bp AAATGCACCTTCTTCCTGGAACCCTTCTCAAGTCACTaGGGGAGAAGCCGGCGTCTGCACTTAGGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: KCTFFLEPFSSH*GRSRRLHLGFL
Trigger: CAGGAAGCCTAAGTGCAGACGCCGGCTTCTCCCGCAGTGACTTGAGAAGGGTTCCAGGAAGAAGGTGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528722.5
CDS TCA 72 bp AACCTTCGTCTTCACTTTCTCTCTCCCAAAAGCCACTaGAGCGGTAGCTGGCGTCTTCACTGCCGCTCACAC +
Preference number: 6 (lower is better)
Translates to: NLRLHFLSPKSH*SGSWRLHCRSH
Trigger: GTGTGAGCGGCAGTGAAGACGCCAGCTACCGCTTCAGTGGCTTTTGGGAGAGAGAAAGTGAAGACGAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000531895.5
ENST00000533342.6
CDS CCA 72 bp CGGTCTTCTCTGGCTGTTCCCCTGGAGTCGGTAGTTTaGTGGCCTCCAACTTCACTAAAATTCACGTCGCTG +
Preference number: 6 (lower is better)
Translates to: RSSLAVPLESVV*WPPTSLKFTSL
Trigger: CAGCGACGTGAATTTTAGTGAAGTTGGAGGCCACCAAACTACCGACTCCAGGGGAACAGCCAGAGAAGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000533342.6
CDS CCA 72 bp TCTTCTCTGGCTGTTCCCCTGGAGTCGGTAGTTTGGTaGCCTCCAACTTCACTAAAATTCACGTCGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SSLAVPLESVVW*PPTSLKFTSLL
Trigger: CAGCAGCGACGTGAATTTTAGTGAAGTTGGAGGCCACCAAACTACCGACTCCAGGGGAACAGCCAGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000533342.6
CDS CAA 72 bp TCGGTCTTCTCTGGCTGTTCCCCTGGAGTCGGTAGTTaGGTGGCCTCCAACTTCACTAAAATTCACGTCGCT +
Preference number: 6 (lower is better)
Translates to: SVFSGCSPGVGS*VASNFTKIHVA
Trigger: AGCGACGTGAATTTTAGTGAAGTTGGAGGCCACCAAACTACCGACTCCAGGGGAACAGCCAGAGAAGACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000533342.6
CDS GCA 72 bp TCTCCAGCTCGTACTGCATCATGTATGCTGCCAAAATaGACCTTCTTCCTGGAACAGGGGTTTGCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: SPARTASCMLPK*TFFLEQGFAVS
Trigger: GGAGACTGCAAACCCCTGTTCCAGGAAGAAGGTGCATTTTGGCAGCATACATGATGCAGTACGAGCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000531895.5
ENST00000533342.6
CDS TCA 72 bp TGTGAGATGCTGTCCAACCTCTCGTTGTTACGTGTGTaGTATCAGCTCCATGCCAGAGCAGCCAATGAAGAC +
Preference number: 6 (lower is better)
Translates to: CEMLSNLSLLRV*YQLHARAANED
Trigger: GTCTTCATTGGCTGCTCTGGCATGGAGCTGATATCACACACGTAACAACGAGAGGTTGGACAGCATCTCACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS GCA 72 bp AGGAGTGCATCCCCGGTCATCCTGGGCTGTCAGATTTaGTCCATTCATTATAAGAGCCTGTACACAAGCATC +
Preference number: 6 (lower is better)
Translates to: RSASPVILGCQI*SIHYKSLYTSI
Trigger: GATGCTTGTGTACAGGCTCTTATAATGAATGGAGCAAATCTGACAGCCCAGGATGACCGGGGATGCACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS GCA 72 bp AAGAATGTCCATGAGTTGCAGCAAGATGTAAAGGAGTaGATCCCCGGTCATCCTGGGCTGTCAGATTTGCTC +
Preference number: 6 (lower is better)
Translates to: KNVHELQQDVKE*IPGHPGLSDLL
Trigger: GAGCAAATCTGACAGCCCAGGATGACCGGGGATGCACTCCTTTACATCTTGCTGCAACTCATGGACATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS GCA 72 bp TCTCCAGCTCGTACTGCATCATGTATGCTGCCAAAATaGACCTTCTTCCTGGAACCCTTCTCAAGTCACTGC +
Preference number: 6 (lower is better)
Translates to: SPARTASCMLPK*TFFLEPFSSHC
Trigger: GCAGTGACTTGAGAAGGGTTCCAGGAAGAAGGTGCATTTTGGCAGCATACATGATGCAGTACGAGCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528722.5
CDS CCA 72 bp GCAGCAAGATGTAAAGGAGTGCATCCCCGGTCATCCTaGGCTGTCAGATTTGCTCCATTCATTATAAGAGCC +
Preference number: 6 (lower is better)
Translates to: AARCKGVHPRSS*AVRFAPFIIRA
Trigger: GGCTCTTATAATGAATGGAGCAAATCTGACAGCCCAGGATGACCGGGGATGCACTCCTTTACATCTTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS GCA 72 bp TTTTCTCTACGTAGTCGTTCATACTCCAGCTGGCCCTaGAGTTCTTTGATGGTCCTCTTTGCCACATCACTG +
Preference number: 6 (lower is better)
Translates to: FSLRSRSYSSWP*SSLMVLFATSL
Trigger: CAGTGATGTGGCAAAGAGGACCATCAAAGAACTGCAGGGCCAGCTGGAGTATGAACGACTACGTAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531815.1
CDS GCA 72 bp GGCAAACCTCTTTGCCACATCACTGGGTCTCTCCCCTaGTTTGTTGGTAATATTACTGTCTGCTCCCATTTT +
Preference number: 6 (lower is better)
Translates to: GKPLCHITGSLP*FVGNITVCSHF
Trigger: AAAATGGGAGCAGACAGTAATATTACCAACAAAGCAGGGGAGAGACCCAGTGATGTGGCAAAGAGGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260047.10
ENST00000393392.6
ENST00000531895.5
ENST00000533342.6
CDS GCA 72 bp CATCCCCTTATCCACTCTGCCCTAGGTAAAGTGACTTaGCCAATTGTAAATCTTCTCACAAACACCCCTCCA +
Preference number: 6 (lower is better)
Translates to: HPLIHSALGKVT*PIVNLLTNTPP
Trigger: TGGAGGGGTGTTTGTGAGAAGATTTACAATTGGGCAAGTCACTTTACCTAGGGCAGAGTGGATAAGGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528190.1
CDS GCA 72 bp GATGGTCCTCTTTGCCACATCACTGGGTCTCTCCCCTaGTTTGTTGGTAATATTACTGTCTGCTCCCATTTT +
Preference number: 6 (lower is better)
Translates to: DGPLCHITGSLP*FVGNITVCSHF
Trigger: AAAATGGGAGCAGACAGTAATATTACCAACAAAGCAGGGGAGAGACCCAGTGATGTGGCAAAGAGGACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531815.1
CDS CAA 90 bp ATTGTAGTCCACATCTTCTATGCTACAACCCCATTTAACAAGAAGTaGCAAGCAGCCAAGCCGCCCATGAAAAGCTGCATAATGCACAGG +
Preference number: 6 (lower is better)
Translates to: IVVHIFYATTPFNKK*QAAKPPMKSCIMHR
Trigger: CCTGTGCATTATGCAGCTTTTCATGGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATGGGGTTGTAGCATAGAAGATGTGGACTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS GCA 72 bp TTTTCTCTACGTAGTCGTTCATACTCCAGCTGGCCCTaGAGTTCTTTGATGGTCTTTTCAGACTCAAGCTGT +
Preference number: 6 (lower is better)
Translates to: FSLRSRSYSSWP*SSLMVFSDSSC
Trigger: ACAGCTTGAGTCTGAAAAGACCATCAAAGAACTGCAGGGCCAGCTGGAGTATGAACGACTACGTAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260047.10
ENST00000531895.5
ENST00000533342.6
CDS CAA 72 bp CACATCTTCTATGCTACAACCCCATTTAACAAGAAGTaGCAAGCAGCCAAGCCGCCCATGAAAAGCTGCATA +
Preference number: 6 (lower is better)
Translates to: HIFYATTPFNKK*QAAKPPMKSCI
Trigger: TATGCAGCTTTTCATGGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATGGGGTTGTAGCATAGAAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS TCA 72 bp AAGTTCATTAATGCTGGCTCCACGTACCACTATTTCTaGAAGCTGCTTTACATCTCCAGCTCGTACTGCATC +
Preference number: 6 (lower is better)
Translates to: KFINAGSTYHYF*KLLYISSSYCI
Trigger: GATGCAGTACGAGCTGGAGATGTAAAGCAGCTTTCAGAAATAGTGGTACGTGGAGCCAGCATTAATGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS TCA 72 bp CTTCGGAGCATTATTTGTAAAGTGAAAGAATGTCCATaGGTTGCAGCAAGATGTAAAGGAGTGCATCCCCGG +
Preference number: 6 (lower is better)
Translates to: LRSIICKVKECP*VAARCKGVHPR
Trigger: CCGGGGATGCACTCCTTTACATCTTGCTGCAACTCATGGACATTCTTTCACTTTACAAATAATGCTCCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS GCA 72 bp TTAATGCTGGCTCCACGTACCACTATTTCTGAAAGCTaGTTTACATCTCCAGCTCGTACTGCATCATGTATG +
Preference number: 6 (lower is better)
Translates to: LMLAPRTTISES*FTSPARTASCM
Trigger: CATACATGATGCAGTACGAGCTGGAGATGTAAAGCAGCTTTCAGAAATAGTGGTACGTGGAGCCAGCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS CCA 72 bp CCAGAATGTGCTGCCCAATGTAAAGGGGTAAACTTATaGAGAACATCAAGTTCATTAATGCTGGCTCCACGT +
Preference number: 6 (lower is better)
Translates to: PECAAQCKGVNL*RTSSSLMLAPR
Trigger: ACGTGGAGCCAGCATTAATGAACTTGATGTTCTCCATAAGTTTACCCCTTTACATTGGGCAGCACATTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260047.10
ENST00000393389.7
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS TCA 72 bp GAGCAGTCAAGAGATTGGTCCATATGGTCCAGTGAGTaGGAGTCAGGCTTTCCAACTATATTTTCCTCAAAA +
Preference number: 6 (lower is better)
Translates to: EQSRDWSIWSSE*ESGFPTIFSSK
Trigger: TTTTGAGGAAAATATAGTTGGAAAGCCTGACTCTCACTCACTGGACCATATGGACCAATCTCTTGACTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528190.1
CDS TCA 72 bp TATAGAGCAGTCAAGAGATTGGTCCATATGGTCCAGTaGGTGAGAGTCAGGCTTTCCAACTATATTTTCCTC +
Preference number: 6 (lower is better)
Translates to: YRAVKRLVHMVQ*VRVRLSNYIFL
Trigger: GAGGAAAATATAGTTGGAAAGCCTGACTCTCACTCACTGGACCATATGGACCAATCTCTTGACTGCTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528190.1
CDS GCA 72 bp TCATACTCAGCCCCCTGGATAAACTGTAAAATGTTCTaGTTGAAGAACCTCTGGGCCAAATCCAGTACATTT +
Preference number: 6 (lower is better)
Translates to: SYSAPWINCKMF*LKNLWAKSSTF
Trigger: AAATGTACTGGATTTGGCCCAGAGGTTCTTCAAGCAGAACATTTTACAGTTTATCCAGGGGGCTGAGTATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260047.10
ENST00000393392.6
ENST00000531895.5
ENST00000533342.6
CDS GCA 72 bp TATACTGCATTTGTTCAGTTAACCAATATGACTGCCTaGTATATGCCAAACAGCATGCTAGTCCCTGTGTGC +
Preference number: 6 (lower is better)
Translates to: YTAFVQLTNMTA*YMPNSMLVPVC
Trigger: GCACACAGGGACTAGCATGCTGTTTGGCATATAGCAGGCAGTCATATTGGTTAACTGAACAAATGCAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528190.1
CDS CCA 72 bp GCTCCCATTTTAATTAACCACTGCAAACACTCTATGTaGCCTTGTCCAGCAGCTTTATGCATAGGAGTTGAT +
Preference number: 6 (lower is better)
Translates to: APILINHCKHSM*PCPAALCIGVD
Trigger: ATCAACTCCTATGCATAAAGCTGCTGGACAAGGCCACATAGAGTGTTTGCAGTGGTTAATTAAAATGGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260047.10
ENST00000393392.6
ENST00000531815.1
ENST00000531895.5
ENST00000533342.6
CDS TCA 72 bp CACTGGGATCTCCACTTCGGAGCATTATTTGTAAAGTaGAAGAATGTCCATGAGTTGCAGCAAGATGTAAAG +
Preference number: 6 (lower is better)
Translates to: HWDLHFGALFVK*KNVHELQQDVK
Trigger: CTTTACATCTTGCTGCAACTCATGGACATTCTTTCACTTTACAAATAATGCTCCGAAGTGGAGATCCCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260047.10
CDS TCA 72 bp TGGGATCCACTCCACTTCGGAGCATTATTTGTAAAGTaGAAGAATGTCCATGAGTTGCAGCAAGATGTAAAG +
Preference number: 6 (lower is better)
Translates to: WDPLHFGALFVK*KNVHELQQDVK
Trigger: CTTTACATCTTGCTGCAACTCATGGACATTCTTTCACTTTACAAATAATGCTCCGAAGTGGAGTGGATCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393389.7
ENST00000393392.6
ENST00000526731.5
ENST00000528722.5
ENST00000531895.5
ENST00000533342.6
CDS GCA 72 bp AATCTTCTTCTGTTATGCCTCCCAAGTGTTTATAGTTaGTCTCGGCAATTTCCAGGAGGTGTCTCAATTCTA +
Preference number: 6 (lower is better)
Translates to: NLLLLCLPSVYS*SRQFPGGVSIL
Trigger: TAGAATTGAGACACCTCCTGGAAATTGCCGAGAGCAACTATAAACACTTGGGAGGCATAACAGAAGAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260047.10
ENST00000531895.5
ENST00000533342.6
CDS TCA 72 bp TATGTGGCCTTGTCCAGCAGCTTTATGCATAGGAGTTaGTCCATTATCAGCACGCTCATTAATATTGATTAC +
Preference number: 6 (lower is better)
Translates to: YVALSSSFMHRS*SIISTLINIDY
Trigger: GTAATCAATATTAATGAGCGTGCTGATAATGGATCAACTCCTATGCATAAAGCTGCTGGACAAGGCCACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260047.10
ENST00000393392.6
ENST00000531815.1
ENST00000531895.5
ENST00000533342.6
CDS CAA 90 bp CTTCTGGCATCTGTTTTATCCAAGTCACTCAGACATAAATCATCCTaGGCATCAGTGCTTCCCTCAACACCATGTCTTATAAAATATTTC +
Preference number: 6 (lower is better)
Translates to: LLASVLSKSLRHKSS*ASVLPSTPCLIKYF
Trigger: GAAATATTTTATAAGACATGGTGTTGAGGGAAGCACTGATGCCAAGGATGATTTATGTCTGAGTGACTTGGATAAAACAGATGCCAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393392.6
CDS CAA 90 bp ATTCTGGCATCTGTTTTATCCAAGTCACTCAGACATAAATCATCCTaGGCATCAGTGCTTCCCTCAACACCATGTCTTATAAAATATTTC +
Preference number: 6 (lower is better)
Translates to: ILASVLSKSLRHKSS*ASVLPSTPCLIKYF
Trigger: GAAATATTTTATAAGACATGGTGTTGAGGGAAGCACTGATGCCAAGGATGATTTATGTCTGAGTGACTTGGATAAAACAGATGCCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260047.10
ENST00000531895.5
ENST00000533342.6
CDS CAA 90 bp GCTTTATGCATAGGAGTTGATCCATTATCAGCACGCTCATTAATATaGATTACTCCATCTTCCACTAATTTCTTAAGCATCCCCAAATCA +
Preference number: 6 (lower is better)
Translates to: ALCIGVDPLSARSLI*ITPSSTNFLSIPKS
Trigger: TGATTTGGGGATGCTTAAGAAATTAGTGGAAGATGGAGTAATCAATATTAATGAGCGTGCTGATAATGGATCAACTCCTATGCATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260047.10
ENST00000393392.6
ENST00000531895.5
ENST00000533342.6
CDS CAA 72 bp ATAGGAGTTGATCCATTATCAGCACGCTCATTAATATaGATTACTCCATCTTCCACTAATTTCTTAAGCATC +
Preference number: 6 (lower is better)
Translates to: IGVDPLSARSLI*ITPSSTNFLSI
Trigger: GATGCTTAAGAAATTAGTGGAAGATGGAGTAATCAATATTAATGAGCGTGCTGATAATGGATCAACTCCTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260047.10
ENST00000393392.6
ENST00000531815.1
ENST00000531895.5
ENST00000533342.6