Pregenerated sensors for ANKRD40CL (Homo sapiens)
Ensembl gene IDs: ENSG00000167117Ensembl transcript IDs: ENST00000300458.1, ENST00000419688.1, ENST00000450727.6, ENST00000502517.5, ENST00000576150.1, ENST00000643007.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | AGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTaGTGTCATGAAATGCAGAAGTGTAAACGATTGGCT | + |
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Preference number: 3 (lower is better) Translates to: SYHVWPFCSQDF*CHEMQKCKRLA Trigger: AGCCAATCGTTTACACTTCTGCATTTCATGACACCAGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| 3UTR-3UTR CAA 90 bp | CAGATTGAAAATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTCAGAAGTGTAAACGATaGGCTCCAGAGAACATGATG | + |
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Preference number: 3 (lower is better) Translates to: QIENDLATMFGRFAARISQKCKR*APENMM Trigger: CATCATGTTCTCTGGAGCCAATCGTTTACACTTCTG...AGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATTTTCAATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR TCA 90 bp | AATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTGGTGTCATGTGGGGTTCTGAATTCTaGCTGCTGGCTTCTCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: NDLATMFGRFAARISGVMWGSEF*LLASPR Trigger: TCGGGGAGAAGCCAGCAGTCAGAATTCAGAACCCCA...CATGACACCAGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR GCA 90 bp | AATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTGGTGTCATGCTCGGCCTCCCAAAGTaGTGGGATTGTACTGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: NDLATMFGRFAARISGVMLGLPK*WDCTGV Trigger: CACACCAGTACAATCCCAGCACTTTGGGAGGCCGAG...CATGACACCAGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR GCA 90 bp | AATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTGGTGTCATGGCTATCTCAGCTCACTaGAACCTCCTCCTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: NDLATMFGRFAARISGVMAISAH*NLLLLG Trigger: ACCCAGGAGGAGGAGGTTGCAGTGAGCTGAGATAGC...CATGACACCAGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR TCA 90 bp | CAGATTGAAAATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTGATCTCTTGACCTTGTaGTCTGCCCACCTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QIENDLATMFGRFAARISDLLTL*SAHLGL Trigger: GAGGCCGAGGTGGGCAGATCACAAGGTCAAGAGATC...AGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATTTTCAATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR TCA 90 bp | CAGATTGAAAATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTGTTCCGGTTCAGCCATaGGTCACCTCTAGTCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: QIENDLATMFGRFAARISVPVQP*VTSSPS Trigger: TGACGGACTAGAGGTGACTCATGGCTGAACCGGAAC...AGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATTTTCAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR TCA 90 bp | AATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTGGTGTCATGATAGTCTCGATCTCTTaGCCTTGTGATCTGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: NDLATMFGRFAARISGVMIVSIS*PCDLPT Trigger: GGTGGGCAGATCACAAGGTCAAGAGATCGAGACTAT...CATGACACCAGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR GCA 90 bp | AATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTGGTGTCATGCTAGTCCGTCAGATGTaGAGCCCCTCTCGCATTTAT | + |
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Preference number: 4 (lower is better) Translates to: NDLATMFGRFAARISGVMLVRQM*SPSRIY Trigger: ATAAATGCGAGAGGGGCTGCACATCTGACGGACTAG...CATGACACCAGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR GCA 90 bp | AATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTGGTGTCATGCATGTTTGGCCGTTTTaGAGCCAGGATTTCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: NDLATMFGRFAARISGVMHVWPF*SQDFWC Trigger: ACACCAGAAATCCTGGCTGCAAAACGGCCAAACATG...CATGACACCAGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR GCA 90 bp | AATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTGGTGTCATGATTACAGGCACGCGCTaGCATGCCCAGCTAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NDLATMFGRFAARISGVMITGTR*HAQLIF Trigger: AAAAATTAGCTGGGCATGGCAGCGCGTGCCTGTAAT...CATGACACCAGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR CCA 90 bp | CAGATTGAAAATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTCTGAATTCTGACTGCTaGCTTCTCCCCGATGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QIENDLATMFGRFAARISLNSDC*LLPDVL Trigger: CAGGACATCGGGGAGAAGCCAGCAGTCAGAATTCAG...AGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATTTTCAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR CCA 90 bp | CAGATTGAAAATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTGCAACCTCCTCCTCCTaGGTTCAAGCAATTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QIENDLATMFGRFAARISATSSS*VQAILL Trigger: CAGGAGAATTGCTTGAACCCAGGAGGAGGAGGTTGC...AGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATTTTCAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR CCA 90 bp | TTCTGGTGTCATGAAATGCAGAAGTGTAAACGATTGGCTCCAGAGAACATGATGCCTAGCTACCATGTTTaGCCGTTTTGCAGCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FWCHEMQKCKRLAPENMMPSYHV*PFCSQD Trigger: ATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGG...CATCATGTTCTCTGGAGCCAATCGTTTACACTTCTGCATTTCATGACACCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR GCA 90 bp | TTCTGGTGTCATGAAATGCAGAAGTGTAAACGATTGGCTCCAGAGAACATGATGCCCCTCTCGCATTTATaGACAAGCTCCCAACCAAAT | + |
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Preference number: 4 (lower is better) Translates to: FWCHEMQKCKRLAPENMMPLSHL*TSSQPN Trigger: ATTTGGTTGGGAGCTTGTGCATAAATGCGAGAGGGG...CATCATGTTCTCTGGAGCCAATCGTTTACACTTCTGCATTTCATGACACCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR CCA 90 bp | CAGATTGAAAATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTTGCAGCCAGGATTTCTaGTGTCATGAAATGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QIENDLATMFGRFAARISCSQDF*CHEMQK Trigger: CTTCTGCATTTCATGACACCAGAAATCCTGGCTGCA...AGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATTTTCAATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR CCA 90 bp | TTCTGGTGTCATGAAATGCAGAAGTGTAAACGATTGGCTCCAGAGAACATGATGCTTCTCCACTCGTTCTaGTTTAATCCCCAGTTCACA | + |
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Preference number: 4 (lower is better) Translates to: FWCHEMQKCKRLAPENMMLLHSF*FNPQFT Trigger: TGTGAACTGGGGATTAAACCAGAACGAGTGGAGAAG...CATCATGTTCTCTGGAGCCAATCGTTTACACTTCTGCATTTCATGACACCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR CCA 90 bp | TTCTGGTGTCATGAAATGCAGAAGTGTAAACGATTGGCTCCAGAGAACATGATGCTCAGCACATCTGTCTaGGAAAATGACCTTGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: FWCHEMQKCKRLAPENMMLSTSV*ENDLGD Trigger: ATCACCAAGGTCATTTTCCCAGACAGATGTGCTGAG...CATCATGTTCTCTGGAGCCAATCGTTTACACTTCTGCATTTCATGACACCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR GCA 90 bp | CAGATTGAAAATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTTCTGGTGTCATGAAATaGAGAAGTGTAAACGATTGG | + |
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Preference number: 4 (lower is better) Translates to: QIENDLATMFGRFAARISSGVMK*RSVNDW Trigger: CCAATCGTTTACACTTCTGCATTTCATGACACCAGA...AGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATTTTCAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS-3UTR CCA 90 bp | TTCTGGTGTCATGAAATGCAGAAGTGTAAACGATTGGCTCCAGAGAACATGATGACTAAAGCCTTAAATTaGGGAGTCACTTGTCATTCA | + |
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Preference number: 4 (lower is better) Translates to: FWCHEMQKCKRLAPENMMTKALN*GVTCHS Trigger: TGAATGACAAGTGACTCCCCAATTTAAGGCTTTAGT...CATCATGTTCTCTGGAGCCAATCGTTTACACTTCTGCATTTCATGACACCAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS GCA 90 bp | CACTGGAAGACGGTGCAGGCCGGTAGTACTCACCCGAGGGAATGGTaGCCTTCGGAGGGGAGGCCAGAGAGGCACAGCAGGCACCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: HWKTVQAGSTHPREW*PSEGRPERHSRHPA Trigger: GGCTGGGTGCCTGCTGTGCCTCTCTGGCCTCCCCTCCGAAGGGCACCATTCCCTCGGGTGAGTACTACCGGCCTGCACCGTCTTCCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000576150.1 |
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| CDS CCA 90 bp | CCCCACTGGAAGACGGTGCAGGCCGGTAGTACTCACCCGAGGGAATaGTGCCCTTCGGAGGGGAGGCCAGAGAGGCACAGCAGGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: PHWKTVQAGSTHPRE*CPSEGRPERHSRHP Trigger: TGGGTGCCTGCTGTGCCTCTCTGGCCTCCCCTCCGAAGGGCACCATTCCCTCGGGTGAGTACTACCGGCCTGCACCGTCTTCCAGTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000576150.1 |
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| CDS CCA 90 bp | ACCTTTGGTCTAGTTGCTCTGCTCTTCACTACCCCACTGGCAGAGTaGCGGAGGCCACAGGGCACTGCTGGCCACAGCATCACCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: TFGLVALLFTTPLAE*RRPQGTAGHSITCV Trigger: GACACAGGTGATGCTGTGGCCAGCAGTGCCCTGTGGCCTCCGCCACTCTGCCAGTGGGGTAGTGAAGAGCAGAGCAACTAGACCAAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576150.1 |
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| CDS CCA 90 bp | GGTACTGAAGTAAGGCTCCAGACTCTCTTCTCAGGCTGTCCCCACTaGAAGACGGTGCAGGCCGGTAGTACTCACCCGAGGGAATGGTGC | + |
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Preference number: 5 (lower is better) Translates to: GTEVRLQTLFSGCPH*KTVQAGSTHPREWC Trigger: GCACCATTCCCTCGGGTGAGTACTACCGGCCTGCACCGTCTTCCAGTGGGGACAGCCTGAGAAGAGAGTCTGGAGCCTTACTTCAGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000576150.1 |
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| CDS TCA 90 bp | GCATGGCTGCTGGCTTCTCCCCGATGTCCTGTTCCGGTTCAGCCATaGGTCACCTCTAGTCCGTCAGATGTGCAGCCCCTCTCGCATTTA | + |
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Preference number: 5 (lower is better) Translates to: AWLLASPRCPVPVQP*VTSSPSDVQPLSHL Trigger: TAAATGCGAGAGGGGCTGCACATCTGACGGACTAGAGGTGACTCATGGCTGAACCGGAACAGGACATCGGGGAGAAGCCAGCAGCCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000419688.1 |
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| CDS CCA 90 bp | CTCCTTGAGGACCATGTTGGGAACAGGACTCCCAGACTCACCTGCTaGCTTCTCCCCGATGTCCTGTTCCGGTTCAGCCATGAGTCACCT | + |
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Preference number: 5 (lower is better) Translates to: LLEDHVGNRTPRLTC*LLPDVLFRFSHESP Trigger: AGGTGACTCATGGCTGAACCGGAACAGGACATCGGGGAGAAGCCAGCAGGTGAGTCTGGGAGTCCTGTTCCCAACATGGTCCTCAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576150.1 |
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| CDS TCA 90 bp | ACTCACCTGCTGGCTTCTCCCCGATGTCCTGTTCCGGTTCAGCCATaGGTCACCTCTAGTCCGTCAGATGTGCAGCCCCTCTCGCATTTA | + |
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Preference number: 5 (lower is better) Translates to: THLLASPRCPVPVQP*VTSSPSDVQPLSHL Trigger: TAAATGCGAGAGGGGCTGCACATCTGACGGACTAGAGGTGACTCATGGCTGAACCGGAACAGGACATCGGGGAGAAGCCAGCAGGTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000576150.1 |
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| CDS GCA 90 bp | ATCCTCCTTGAGGACCATGTTGGGAACAGGACTCCCAGACTCACCTaGTGGCTTCTCCCCGATGTCCTGTTCCGGTTCAGCCATGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: ILLEDHVGNRTPRLT*WLLPDVLFRFSHES Trigger: TGACTCATGGCTGAACCGGAACAGGACATCGGGGAGAAGCCAGCAGGTGAGTCTGGGAGTCCTGTTCCCAACATGGTCCTCAAGGAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576150.1 |
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| CDS CCA 90 bp | CCTGGGAATCAGGAAAGAGTTGAGAAGGAGCAGTACCTGACCAGTTaGCTGTCTGCCAGACAAAGGACAAGGATGCCCCACTTCCACTTC | + |
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Preference number: 5 (lower is better) Translates to: PGNQERVEKEQYLTS*LSARQRTRMPHFHF Trigger: GAAGTGGAAGTGGGGCATCCTTGTCCTTTGTCTGGCAGACAGCCAACTGGTCAGGTACTGCTCCTTCTCAACTCTTTCCTGATTCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CCA 90 bp | ACCCTTGGGCAATACATAGCAGGTGCTCATACCTTGTTGCTTATCTaGAAAGCTTCAGGGAAATGTATAGCCCTGGGGGCCCTGGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: TLGQYIAGAHTLLLI*KASGKCIALGALVS Trigger: GGACACCAGGGCCCCCAGGGCTATACATTTCCCTGAAGCTTTCCAGATAAGCAACAAGGTATGAGCACCTGCTATGTATTGCCCAAGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS GCA 90 bp | GTCCTGTTCCGGTTCAGCCATGAGTCACCTCTAGTCCGTCAGATGTaGAGCCCCTCTCGCATTTATGCACAAGCTCCCAACCAAATAAAA | + |
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Preference number: 5 (lower is better) Translates to: VLFRFSHESPLVRQM*SPSRIYAQAPNQIK Trigger: TTTTATTTGGTTGGGAGCTTGTGCATAAATGCGAGAGGGGCTGCACATCTGACGGACTAGAGGTGACTCATGGCTGAACCGGAACAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000300458.1 ENST00000419688.1 ENST00000450727.6 ENST00000502517.5 ENST00000576150.1 |
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| CDS-3UTR CAA 90 bp | AATGACCTAGCTACCATGTTTGGCCGTTTTGCAGCCAGGATTTCTGGTGTCATGCCATGTTTGGCCGTTTaGCAGCCAGGATTTCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: NDLATMFGRFAARISGVMPCLAV*QPGFLV Trigger: CACCAGAAATCCTGGCTGCAAAACGGCCAAACATGG...CATGACACCAGAAATCCTGGCTGCAAAACGGCCAAACATGGTAGCTAGGTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS GCA 90 bp | GCCACCATGCGCGGCCATTCCTGGGAGTATTTAATAAGTCATTTTTaGAGCTTTGCTATCATAGCAGGGCCTTTCTGTCAGAGATGGCAC | + |
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Preference number: 5 (lower is better) Translates to: ATMRGHSWEYLISHF*SFAIIAGPFCQRWH Trigger: GTGCCATCTCTGACAGAAAGGCCCTGCTATGATAGCAAAGCTGCAAAAATGACTTATTAAATACTCCCAGGAATGGCCGCGCATGGTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000450727.6 |
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| CDS CCA 90 bp | GAACATGTTGAAAGCCTGCTTTGCACCAGGCACTGGGCTAAGCCCTaGGGAAATCATGTTCAAAAATCCCAAAGATGTCTCTGTGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: EHVESLLCTRHWAKP*GNHVQKSQRCLCAP Trigger: AGGAGCACAGAGACATCTTTGGGATTTTTGAACATGATTTCCCCAGGGCTTAGCCCAGTGCCTGGTGCAAAGCAGGCTTTCAACATGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CCA 90 bp | GTCACTGGGTTTCTTGTTATCACTTGGGTCCGTTGTTGGCAAGTGTaGATTTGTGCCTTCTTGTTTATATTCACCTGCTGGCTTCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: VTGFLVITWVRCWQV*ICAFLFIFTCWLLP Trigger: GGGGAGAAGCCAGCAGGTGAATATAAACAAGAAGGCACAAATCCACACTTGCCAACAACGGACCCAAGTGATAACAAGAAACCCAGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643007.1 |
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| CDS TCA 90 bp | GGAGTGTTGGGCAAGCTCTGGGATGTATGCCCCCATTATATCCACTaGAGACAGAAAGCTTGCAGCTTTAAGCCAGCCAAGGATTTAAAA | + |
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Preference number: 5 (lower is better) Translates to: GVLGKLWDVCPHYIH*RQKACSFKPAKDLK Trigger: TTTTAAATCCTTGGCTGGCTTAAAGCTGCAAGCTTTCTGTCTTCAGTGGATATAATGGGGGCATACATCCCAGAGCTTGCCCAACACTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS GCA 90 bp | GCGCGGCCATTCCTGGGAGTATTTAATAAGTCATTTTTGCAGCTTTaGTATCATAGCAGGGCCTTTCTGTCAGAGATGGCACATATTCTG | + |
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Preference number: 5 (lower is better) Translates to: ARPFLGVFNKSFLQL*YHSRAFLSEMAHIL Trigger: CAGAATATGTGCCATCTCTGACAGAAAGGCCCTGCTATGATAGCAAAGCTGCAAAAATGACTTATTAAATACTCCCAGGAATGGCCGCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000450727.6 |
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| CDS GCA 90 bp | GTATTTCTTTCTTTCTTACAATATCCACTGAACATGTTGAAAGCCTaGTTTGCACCAGGCACTGGGCTAAGCCCTGGGGAAATCATGTTC | + |
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Preference number: 5 (lower is better) Translates to: VFLSFLQYPLNMLKA*FAPGTGLSPGEIMF Trigger: GAACATGATTTCCCCAGGGCTTAGCCCAGTGCCTGGTGCAAAGCAGGCTTTCAACATGTTCAGTGGATATTGTAAGAAAGAAAGAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CCA 90 bp | GTCACTGGGTTTCTTGTTATCACTTGGGTCCGTTGTTGGCAAGTGTaGATTTGTGCCTTCTTGTTTATATTCACCTGGGAATCAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: VTGFLVITWVRCWQV*ICAFLFIFTWESGK Trigger: CTTTCCTGATTCCCAGGTGAATATAAACAAGAAGGCACAAATCCACACTTGCCAACAACGGACCCAAGTGATAACAAGAAACCCAGTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS GCA 90 bp | TACAGCCTCAGCACATCTGTCTGCAAGGTAACAACAGTGTGTTCTTaGCAGCCCAGTGAGATAGAGCAGGGTCATTTTTATTTTATAGAT | + |
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Preference number: 5 (lower is better) Translates to: YSLSTSVCKVTTVCS*QPSEIEQGHFYFID Trigger: ATCTATAAAATAAAAATGACCCTGCTCTATCTCACTGGGCTGGCAAGAACACACTGTTGTTACCTTGCAGACAGATGTGCTGAGGCTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000576150.1 |
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| CDS GCA 90 bp | TCTTTCTTTCTTACAATATCCACTGAACATGTTGAAAGCCTGCTTTaGACCAGGCACTGGGCTAAGCCCTGGGGAAATCATGTTCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: SFFLTISTEHVESLL*TRHWAKPWGNHVQK Trigger: TTTTTGAACATGATTTCCCCAGGGCTTAGCCCAGTGCCTGGTGCAAAGCAGGCTTTCAACATGTTCAGTGGATATTGTAAGAAAGAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS-3UTR CAA 90 bp | TTCTGGTGTCATGAAATGCAGAAGTGTAAACGATTGGCTCCAGAGAACATGATGCAGAAGTGTAAACGATaGGCTCCAGAGAACATGATG | + |
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Preference number: 5 (lower is better) Translates to: FWCHEMQKCKRLAPENMMQKCKR*APENMM Trigger: CATCATGTTCTCTGGAGCCAATCGTTTACACTTCTG...CATCATGTTCTCTGGAGCCAATCGTTTACACTTCTGCATTTCATGACACCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502517.5 |
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| CDS TCA 90 bp | GTCAATCTGGAGCTTCCATTTTTCATTAAAATGAGTTCCACTTCCTaGAAGTCCCGCAGTCTTCGAATGTCTTTGTCCTTTCTGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: VNLELPFFIKMSSTS*KSRSLRMSLSFLSS Trigger: ACTGCTCAGAAAGGACAAAGACATTCGAAGACTGCGGGACTTTCAGGAAGTGGAACTCATTTTAATGAAAAATGGAAGCTCCAGATTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000300458.1 ENST00000450727.6 ENST00000643007.1 |
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| CDS GCA 72 bp | ACGGTGCAGGCCGGTAGTACTCACCCGAGGGAATGGTaGCCTTCGGAGGGGAGGCCAGAGAGGCACAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TVQAGSTHPREW*PSEGRPERHSR Trigger: CCTGCTGTGCCTCTCTGGCCTCCCCTCCGAAGGGCACCATTCCCTCGGGTGAGTACTACCGGCCTGCACCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000576150.1 |
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| CDS GCA 72 bp | TACCCCACTGGCAGAGTGGCGGAGGCCACAGGGCACTaGTGGCCACAGCATCACCTGTGTCCCAGCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: YPTGRVAEATGH*WPQHHLCPSLP Trigger: GGGAAGGCTGGGACACAGGTGATGCTGTGGCCAGCAGTGCCCTGTGGCCTCCGCCACTCTGCCAGTGGGGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576150.1 |
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| CDS CCA 72 bp | AAGACGGTGCAGGCCGGTAGTACTCACCCGAGGGAATaGTGCCCTTCGGAGGGGAGGCCAGAGAGGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: KTVQAGSTHPRE*CPSEGRPERHS Trigger: GCTGTGCCTCTCTGGCCTCCCCTCCGAAGGGCACCATTCCCTCGGGTGAGTACTACCGGCCTGCACCGTCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000576150.1 |
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| CDS GCA 72 bp | AGACTCTCTTCTCAGGCTGTCCCCACTGGAAGACGGTaGAGGCCGGTAGTACTCACCCGAGGGAATGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: RLSSQAVPTGRR*RPVVLTRGNGA Trigger: GGCACCATTCCCTCGGGTGAGTACTACCGGCCTGCACCGTCTTCCAGTGGGGACAGCCTGAGAAGAGAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000576150.1 |
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| CDS CCA 72 bp | GTAAGGCTCCAGACTCTCTTCTCAGGCTGTCCCCACTaGAAGACGGTGCAGGCCGGTAGTACTCACCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: VRLQTLFSGCPH*KTVQAGSTHPR Trigger: CCTCGGGTGAGTACTACCGGCCTGCACCGTCTTCCAGTGGGGACAGCCTGAGAAGAGAGTCTGGAGCCTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000576150.1 |
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| CDS TCA 72 bp | CTGGCTTCTCCCCGATGTCCTGTTCCGGTTCAGCCATaGGTCACCTCTAGTCCGTCAGATGTGCAGCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: LASPRCPVPVQP*VTSSPSDVQPL Trigger: GAGGGGCTGCACATCTGACGGACTAGAGGTGACTCATGGCTGAACCGGAACAGGACATCGGGGAGAAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000300458.1 ENST00000419688.1 ENST00000450727.6 ENST00000502517.5 ENST00000576150.1 |
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| CDS GCA 72 bp | GCTTTTCACAGGGCCCTGTGGAGAGTTCAGCATGGCTaGTGGCTTCTCCCCGATGTCCTGTTCCGGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: AFHRALWRVQHG*WLLPDVLFRFS Trigger: GCTGAACCGGAACAGGACATCGGGGAGAAGCCAGCAGCCATGCTGAACTCTCCACAGGGCCCTGTGAAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000419688.1 |
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| CDS GCA 72 bp | CGGTTCAGCCATGAGTCACCTCTAGTCCGTCAGATGTaGAGCCCCTCTCGCATTTATGCACAAGCTCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: RFSHESPLVRQM*SPSRIYAQAPN Trigger: GTTGGGAGCTTGTGCATAAATGCGAGAGGGGCTGCACATCTGACGGACTAGAGGTGACTCATGGCTGAACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000300458.1 ENST00000419688.1 ENST00000450727.6 ENST00000502517.5 ENST00000576150.1 |
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| CDS TCA 72 bp | CTGGGAATCAGGAAAGAGTTGAGAAGGAGCAGTACCTaGCCAGTTGGCTGTCTGCCAGACAAAGGACAAGGA | + |
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Preference number: 6 (lower is better) Translates to: LGIRKELRRSST*PVGCLPDKGQG Trigger: TCCTTGTCCTTTGTCTGGCAGACAGCCAACTGGTCAGGTACTGCTCCTTCTCAACTCTTTCCTGATTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 90 bp | CACATAGGGGCTGAGTCTTCACCTAGACAGGTGTCACTGGGTTTCTaGTTATCACTTGGGTCCGTTGTTGGCAAGTGTGGATTTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: HIGAESSPRQVSLGF*LSLGSVVGKCGFVP Trigger: AGGCACAAATCCACACTTGCCAACAACGGACCCAAGTGATAACAAGAAACCCAGTGACACCTGTCTAGGTGAAGACTCAGCCCCTATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS TCA 72 bp | GGCAAGCTCTGGGATGTATGCCCCCATTATATCCACTaGAGACAGAAAGCTTGCAGCTTTAAGCCAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GKLWDVCPHYIH*RQKACSFKPAK Trigger: CTTGGCTGGCTTAAAGCTGCAAGCTTTCTGTCTTCAGTGGATATAATGGGGGCATACATCCCAGAGCTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 72 bp | GCTGAGTCTTCACCTAGACAGGTGTCACTGGGTTTCTaGTTATCACTTGGGTCCGTTGTTGGCAAGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: AESSPRQVSLGF*LSLGSVVGKCG Trigger: TCCACACTTGCCAACAACGGACCCAAGTGATAACAAGAAACCCAGTGACACCTGTCTAGGTGAAGACTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 90 bp | AAACACATCACCCTTGGGCAATACATAGCAGGTGCTCATACCTTGTaGCTTATCTGGAAAGCTTCAGGGAAATGTATAGCCCTGGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: KHITLGQYIAGAHTL*LIWKASGKCIALGA Trigger: GGCCCCCAGGGCTATACATTTCCCTGAAGCTTTCCAGATAAGCAACAAGGTATGAGCACCTGCTATGTATTGCCCAAGGGTGATGTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS TCA 72 bp | GGAGCTTTCATGGGCACATACACACTTTGCATTAGCTaGGGGTTCTTTTCTTGGAGTGTTGGGCAAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GAFMGTYTLCIS*GFFSWSVGQAL Trigger: CAGAGCTTGCCCAACACTCCAAGAAAAGAACCCTCAGCTAATGCAAAGTGTGTATGTGCCCATGAAAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CCA 72 bp | CAATACATAGCAGGTGCTCATACCTTGTTGCTTATCTaGAAAGCTTCAGGGAAATGTATAGCCCTGGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: QYIAGAHTLLLI*KASGKCIALGA Trigger: GGCCCCCAGGGCTATACATTTCCCTGAAGCTTTCCAGATAAGCAACAAGGTATGAGCACCTGCTATGTATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 72 bp | CACCTAGACAGGTGTCACTGGGTTTCTTGTTATCACTaGGGTCCGTTGTTGGCAAGTGTGGATTTGTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: HLDRCHWVSCYH*GPLLASVDLCL Trigger: AAGGCACAAATCCACACTTGCCAACAACGGACCCAAGTGATAACAAGAAACCCAGTGACACCTGTCTAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS GCA 72 bp | GGGAAATCATGTTCAAAAATCCCAAAGATGTCTCTGTaGTCCTGGAGTTTGCAGGCCAGCAGAAGAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: GKSCSKIPKMSL*SWSLQASRRDR Trigger: TCTGTCTCTTCTGCTGGCCTGCAAACTCCAGGAGCACAGAGACATCTTTGGGATTTTTGAACATGATTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 72 bp | AAAAGTCCAAATGGAAAGCAGATGGTCAGTTTGGCTTaGCAACCTGGTCACATAGGGGCTGAGTCTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: KSPNGKQMVSLA*QPGHIGAESSP Trigger: AGGTGAAGACTCAGCCCCTATGTGACCAGGTTGCAAAGCCAAACTGACCATCTGCTTTCCATTTGGACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 90 bp | GCCTTTTGTGTATTTCTTTCTTTCTTACAATATCCACTGAACATGTaGAAAGCCTGCTTTGCACCAGGCACTGGGCTAAGCCCTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: AFCVFLSFLQYPLNM*KACFAPGTGLSPGE Trigger: TTCCCCAGGGCTTAGCCCAGTGCCTGGTGCAAAGCAGGCTTTCAACATGTTCAGTGGATATTGTAAGAAAGAAAGAAATACACAAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 90 bp | CTAGACAGGTGTCACTGGGTTTCTTGTTATCACTTGGGTCCGTTGTaGGCAAGTGTGGATTTGTGCCTTCTTGTTTATATTCACCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LDRCHWVSCYHLGPL*ASVDLCLLVYIHLG Trigger: TCCCAGGTGAATATAAACAAGAAGGCACAAATCCACACTTGCCAACAACGGACCCAAGTGATAACAAGAAACCCAGTGACACCTGTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 90 bp | CACCTAGACAGGTGTCACTGGGTTTCTTGTTATCACTTGGGTCCGTaGTTGGCAAGTGTGGATTTGTGCCTTCTTGTTTATATTCACCTG | + |
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Preference number: 6 (lower is better) Translates to: HLDRCHWVSCYHLGP*LASVDLCLLVYIHL Trigger: CAGGTGAATATAAACAAGAAGGCACAAATCCACACTTGCCAACAACGGACCCAAGTGATAACAAGAAACCCAGTGACACCTGTCTAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 90 bp | CTGAGTCTTCACCTAGACAGGTGTCACTGGGTTTCTTGTTATCACTaGGGTCCGTTGTTGGCAAGTGTGGATTTGTGCCTTCTTGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: LSLHLDRCHWVSCYH*GPLLASVDLCLLVY Trigger: ATAAACAAGAAGGCACAAATCCACACTTGCCAACAACGGACCCAAGTGATAACAAGAAACCCAGTGACACCTGTCTAGGTGAAGACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 90 bp | TTTAAACACATCACCCTTGGGCAATACATAGCAGGTGCTCATACCTaGTTGCTTATCTGGAAAGCTTCAGGGAAATGTATAGCCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FKHITLGQYIAGAHT*LLIWKASGKCIALG Trigger: CCCCAGGGCTATACATTTCCCTGAAGCTTTCCAGATAAGCAACAAGGTATGAGCACCTGCTATGTATTGCCCAAGGGTGATGTGTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 90 bp | CTAGACAGGTGTCACTGGGTTTCTTGTTATCACTTGGGTCCGTTGTaGGCAAGTGTGGATTTGTGCCTTCTTGTTTATATTCACCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LDRCHWVSCYHLGPL*ASVDLCLLVYIHLL Trigger: CAGCAGGTGAATATAAACAAGAAGGCACAAATCCACACTTGCCAACAACGGACCCAAGTGATAACAAGAAACCCAGTGACACCTGTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643007.1 |
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| CDS GCA 72 bp | TCTAGTCCGTCAGATGTGCAGCCCCTCTCGCATTTATaGACAAGCTCCCAACCAAATAAAAAGCACTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: SSPSDVQPLSHL*TSSQPNKKHFL Trigger: TAGAAAGTGCTTTTTATTTGGTTGGGAGCTTGTGCATAAATGCGAGAGGGGCTGCACATCTGACGGACTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000300458.1 ENST00000419688.1 ENST00000450727.6 ENST00000502517.5 ENST00000576150.1 |
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| CDS CAA 72 bp | ACCCTTGGGCAATACATAGCAGGTGCTCATACCTTGTaGCTTATCTGGAAAGCTTCAGGGAAATGTATAGCC | + |
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Preference number: 6 (lower is better) Translates to: TLGQYIAGAHTL*LIWKASGKCIA Trigger: GGCTATACATTTCCCTGAAGCTTTCCAGATAAGCAACAAGGTATGAGCACCTGCTATGTATTGCCCAAGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 72 bp | AGGTGTCACTGGGTTTCTTGTTATCACTTGGGTCCGTaGTTGGCAAGTGTGGATTTGTGCCTTCTTGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: RCHWVSCYHLGP*LASVDLCLLVY Trigger: ATAAACAAGAAGGCACAAATCCACACTTGCCAACAACGGACCCAAGTGATAACAAGAAACCCAGTGACACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000643007.1 |
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| CDS CCA 72 bp | GTAAGAAAAACCAAACACTTTGTTTCTCGGTTTGAATaGACTCCTCCTCCCCATTTCACTGTCTTTACTCCC | + |
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Preference number: 6 (lower is better) Translates to: VRKTKHFVSRFE*TPPPHFTVFTP Trigger: GGGAGTAAAGACAGTGAAATGGGGAGGAGGAGTCCATTCAAACCGAGAAACAAAGTGTTTGGTTTTTCTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000576150.1 |
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| CDS CAA 72 bp | GTATTTCTTTCTTTCTTACAATATCCACTGAACATGTaGAAAGCCTGCTTTGCACCAGGCACTGGGCTAAGC | + |
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Preference number: 6 (lower is better) Translates to: VFLSFLQYPLNM*KACFAPGTGLS Trigger: GCTTAGCCCAGTGCCTGGTGCAAAGCAGGCTTTCAACATGTTCAGTGGATATTGTAAGAAAGAAAGAAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 72 bp | ATCACCCTTGGGCAATACATAGCAGGTGCTCATACCTaGTTGCTTATCTGGAAAGCTTCAGGGAAATGTATA | + |
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Preference number: 6 (lower is better) Translates to: ITLGQYIAGAHT*LLIWKASGKCI Trigger: TATACATTTCCCTGAAGCTTTCCAGATAAGCAACAAGGTATGAGCACCTGCTATGTATTGCCCAAGGGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300458.1 |
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| CDS CAA 90 bp | GCAGGCCAGCAGAAGAGACAGATATTAATAAATGGGAAATCACAGTaGTCGGGGCATGATGAATGTGAAATACACAGTACTTTGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: AGQQKRQILINGKSQ*SGHDECEIHSTLKA Trigger: TGCTTTCAAAGTACTGTGTATTTCACATTCATCATGCCCCGACAACTGTGATTTCCCATTTATTAATATCTGTCTCTTCTGCTGGCCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000419688.1 |
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| CDS TCA 72 bp | GAGCTTCCATTTTTCATTAAAATGAGTTCCACTTCCTaGAAGTCCCGCAGTCTTCGAATGTCTTTGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ELPFFIKMSSTS*KSRSLRMSLSF Trigger: AAAGGACAAAGACATTCGAAGACTGCGGGACTTTCAGGAAGTGGAACTCATTTTAATGAAAAATGGAAGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000300458.1 ENST00000450727.6 ENST00000643007.1 |
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| CDS TCA 72 bp | TTAACAATCCTACCTCACCAGATTGTAAGAAGTCAATaGGAAAGTACACAGAAGGTACAACTTCCTAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LTILPHQIVRSQ*ESTQKVQLPSS Trigger: ACTGCTAGGAAGTTGTACCTTCTGTGTACTTTCTCATTGACTTCTTACAATCTGGTGAGGTAGGATTGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576150.1 |
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| CDS CAA 72 bp | CAGAAGAGACAGATATTAATAAATGGGAAATCACAGTaGTCGGGGCATGATGAATGTGAAATACACAGTACT | + |
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Preference number: 6 (lower is better) Translates to: QKRQILINGKSQ*SGHDECEIHST Trigger: AGTACTGTGTATTTCACATTCATCATGCCCCGACAACTGTGATTTCCCATTTATTAATATCTGTCTCTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300458.1 ENST00000419688.1 |
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