Pregenerated sensors for ANKRD36 (Homo sapiens)
Ensembl gene IDs: ENSG00000135976Ensembl transcript IDs: ENST00000421946.2, ENST00000652721.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GAAGCTTCACTCGCTTGCCTGCCACTCACCTCCTGCTGTGCAGCCTaGTTCCTAACAGGTCATGGAACTGTGTGTGGCCTGGGAGTTGGG | + |
Preference number: 1 (lower is better) Translates to: EASLACLPLTSCCAA*FLTGHGTVCGLGVG Trigger: CCCAACTCCCAGGCCACACACAGTTCCATGACCTGTTAGGAAGCAGGCTGCACAGCAGGAGGTGAGTGGCAGGCAAGCGAGTGAAGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652721.1 |
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3UTR TCA 90 bp | CTAGATCCCTTGAACGAGCAGTTCACAGTAGGATTTTCACTCCTGTaGGAATCTAATGGCTTTGCTGATCTGACAGGAGGCAGAGCTCAG | + |
Preference number: 1 (lower is better) Translates to: LDPLNEQFTVGFSLL*ESNGFADLTGGRAQ Trigger: CTGAGCTCTGCCTCCTGTCAGATCAGCAAAGCCATTAGATTCTCACAGGAGTGAAAATCCTACTGTGAACTGCTCGTTCAAGGGATCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652721.1 |
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3UTR TCA 90 bp | GAAATAATTACACAACTCATCATAATGGAGAATCAATGGGAGTCCTaGGCTTGTTTTTCTGTAACTAGATGGTCCCATCGTGAAGAGATA | + |
Preference number: 1 (lower is better) Translates to: EIITQLIIMENQWES*ACFSVTRWSHREEI Trigger: TATCTCTTCACGATGGGACCATCTAGTTACAGAAAAACAAGCTCAGGACTCCCATTGATTCTCCATTATGATGAGTTGTGTAATTATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652721.1 |
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CDS GCA 90 bp | CCCCTTCAGTCTGCATATTGTTCATGGCTACTTTTGTGCTGTAATTaGAGGGCCGAGTTATTGCAACAAGGATCTTATGGCTCACAAAGC | + |
Preference number: 5 (lower is better) Translates to: PLQSAYCSWLLLCCN*RAELLQQGSYGSQS Trigger: GCTTTGTGAGCCATAAGATCCTTGTTGCAATAACTCGGCCCTGCAATTACAGCACAAAAGTAGCCATGAACAATATGCAGACTGAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421946.2 |
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CDS GCA 90 bp | ACTGCTACACCCCTTCAGTCTGCATATTGTTCATGGCTACTTTTGTaGTGTAATTGCAGGGCCGAGTTATTGCAACAAGGATCTTATGGC | + |
Preference number: 5 (lower is better) Translates to: TATPLQSAYCSWLLL*CNCRAELLQQGSYG Trigger: GCCATAAGATCCTTGTTGCAATAACTCGGCCCTGCAATTACAGCACAAAAGTAGCCATGAACAATATGCAGACTGAAGGGGTGTAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421946.2 |
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CDS GCA 90 bp | ATTGTTCATGGCTACTTTTGTGCTGTAATTGCAGGGCCGAGTTATTaGAACAAGGATCTTATGGCTCACAAAGCCTTACATAACACTATC | + |
Preference number: 5 (lower is better) Translates to: IVHGYFCAVIAGPSY*NKDLMAHKALHNTI Trigger: GATAGTGTTATGTAAGGCTTTGTGAGCCATAAGATCCTTGTTGCAATAACTCGGCCCTGCAATTACAGCACAAAAGTAGCCATGAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421946.2 |
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CDS CCA 72 bp | GACACTGCTACACCCCTTCAGTCTGCATATTGTTCATaGCTACTTTTGTGCTGTAATTGCAGGGCCGAGTTA | + |
Preference number: 6 (lower is better) Translates to: DTATPLQSAYCS*LLLCCNCRAEL Trigger: TAACTCGGCCCTGCAATTACAGCACAAAAGTAGCCATGAACAATATGCAGACTGAAGGGGTGTAGCAGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421946.2 |
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CDS CAA 90 bp | GACACTGCTACACCCCTTCAGTCTGCATATTGTTCATGGCTACTTTaGTGCTGTAATTGCAGGGCCGAGTTATTGCAACAAGGATCTTAT | + |
Preference number: 6 (lower is better) Translates to: DTATPLQSAYCSWLL*CCNCRAELLQQGSY Trigger: ATAAGATCCTTGTTGCAATAACTCGGCCCTGCAATTACAGCACAAAAGTAGCCATGAACAATATGCAGACTGAAGGGGTGTAGCAGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421946.2 |
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CDS GCA 72 bp | TCTGCATATTGTTCATGGCTACTTTTGTGCTGTAATTaGAGGGCCGAGTTATTGCAACAAGGATCTTATGGC | + |
Preference number: 6 (lower is better) Translates to: SAYCSWLLLCCN*RAELLQQGSYG Trigger: GCCATAAGATCCTTGTTGCAATAACTCGGCCCTGCAATTACAGCACAAAAGTAGCCATGAACAATATGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421946.2 |