RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD35 (Homo sapiens)

Ensembl gene IDs: ENSG00000198483

Ensembl transcript IDs: ENST00000355594.9, ENST00000544626.2

Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp TCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATaGCCTAGTGGCCAACACCCCCGCCCACCACAGCCTGATGAAGCC +
Preference number: 2 (lower is better)
Translates to: SGLRSIMSGEALPIP*PSGQHPRPPQPDEA
Trigger: GGCTTCATCAGGCTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
3UTR-3UTR TCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCAGAATCTCGTATCCCTaGGGGCACACAGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRRISYP*GHTVRL
Trigger: CAGCCTCACTGTGTGCCCTCAGGGATACGAGATTCT...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
3UTR-3UTR TCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGAGAATCTCGTATCCCTaGGGGCACACAGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLRISYP*GHTVRL
Trigger: CAGCCTCACTGTGTGCCCTCAGGGATACGAGATTCT...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGGCCCTCGGAGACCGCTaGTCTGGGAGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQALGDR*SGRPGA
Trigger: AGCTCCTGGCCTCCCAGAGCAGCGGTCTCCGAGGGC...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGGCCCCCGCATCTCGCTaGCCTGGCGCTCTTGTTCGG +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQAPASR*PGALVR
Trigger: CCGAACAAGAGCGCCAGGCCAGCGAGATGCGGGGGC...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCATCTTGTTCGGCTGCCTaGGCGGCCAGGTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPSCSAA*AARSPL
Trigger: GAGCGGGGACCTGGCCGCTCAGGCAGCCGAACAAGA...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCAGCGCTCTTGTTCGGCTaGCTGAGCGGCCAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPALLFG*LSGQVP
Trigger: GGGGACCTGGCCGCTCAGGCAGCCGAACAAGAGCGC...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGCCCGCGTCAGCTCCGTaGCTCAGGAGCAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQPASAP*LRSSSA
Trigger: GGCTGAACTGCTCCTGAGCCACGGAGCTGACGCGGG...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGTCGCTGCAGCAGCTGTaGGCAGATAGCTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQSLQQL*ADSCVP
Trigger: GGGCACGCAGCTATCTGCTCACAGCTGCTGCAGCGA...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCTGCTGGACTAGCCTCTaGCCGCCCCGCCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPCWTSL*PPRRRR
Trigger: CCGGCGGCGGCGGGGCGGTCAGAGGCTAGTCCAGCA...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCAGATCCACCAGGGTGCTaGTGCAGGCCCGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPDPPGC*CRPAAP
Trigger: AGGAGCTGCGGGCCTGCATCAGCACCCTGGTGGATC...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCATCCCTCTGCAACCTCTaGCGCTCCCGCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPSLCNL*RSRPNS
Trigger: GGAGTTGGGGCGGGAGCGGCAGAGGTTGCAGAGGGA...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGTGCCTGGGGCTCAGATaGAGAGGCCTGGGATGCGAG +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQCLGLR*RGLGCE
Trigger: CTCGCATCCCAGGCCTCTCCATCTGAGCCCCAGGCA...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGCTGGACCTGCGCCTGTaGCTTGGGCACAAACTCCCG +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQLDLRL*LGHKLP
Trigger: CGGGAGTTTGTGCCCAAGCCACAGGCGCAGGTCCAG...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGTCCAGAGCGGCCACTTaGGGGGATGCTGGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQSRAAT*GDAGAF
Trigger: AAAGGCCCCAGCATCCCCCCAAGTGGCCGCTCTGGA...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACCAGGGCTCCCTCCATaGCCGGTCTTGACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPPGLPP*PVLTKP
Trigger: GGGCTTTGTCAAGACCGGTCATGGAGGGAGCCCTGG...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGAGGACCCCTAGCTCCTaGGCCTGCTCTCGAATCTGG +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQRTPSS*ACSRIW
Trigger: CCAGATTCGAGAGCAGGCGCAGGAGCTAGGGGTCCT...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCAGACTGTAGCTCCCTCTaGAACCTCTGCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPDCSSL*NLCRSR
Trigger: GCGGGAGCGGCAGAGGTTGCAGAGGGAGCTACAGTC...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCAGGAGGAGAACCTGCCTaGGGCTCAGATGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPGGEPA*GSDGEA
Trigger: GGCCTCTCCATCTGAGCCCCAGGCAGGTTCTCCTCC...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGTGGGAACTCTCCTTCTaGCCAGCAGGCAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQWELSF*PAGSWS
Trigger: TGACCAGCTGCCTGCTGGTCAGAAGGAGAGTTCCCA...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGCCTAGAGGCTCTCCTTaGGCCCCAGGAACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQPRGSP*APGTLF
Trigger: GAAAAGGGTTCCTGGGGCTCAAGGAGAGCCTCTAGG...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACCTGAGGGCACACAGTaGGGCTGCCTCACTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPPEGTQ*GCLTPL
Trigger: AAGAGGAGTGAGGCAGCCTCACTGTGTGCCCTCAGG...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGCCACCTCGGCACTaGCTTTCTCACAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPQPPRH*LSHRPG
Trigger: TCCTGGCCTGTGAGAAAGGCAGTGCCGAGGTGGCTG...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAAGCCGAGCCAGCACCTaGTGGGCCTCCCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPISRAST*WASRCR
Trigger: TCGGCACCGGGAGGCCCAGCAGGTGCTGGCTCGGCT...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACGAACCCACCGGACTTaGCTGCGGCTGTGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPRTHRT*LRLCKR
Trigger: TCTCTTGCACAGCCGCAGCCAAGTCCGGTGGGTTCG...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCATCTTCCCGCTCATCGTaGCCTGAACTGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPSSRSS*PELPAA
Trigger: AGCTGCGGGCAGTTCAGGCCACGATGAGCGGGAAGA...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTTGCTGGACTAGCCTCTaGCCGCCCCGCCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEACWTSL*PPRRRR
Trigger: CCGGCGGCGGCGGGGCGGTCAGAGGCTAGTCCAGCA...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCAGGCAGCTGCTGCTaGCTCAGCACGGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIPGSCC*LSTGSP
Trigger: GGGACTCCCCGTGCTGAGGCAGCAGCAGCTGCCTGG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCTCCCAGGCAGCTGCTaGTGCCTCAGCACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRLPGSC*CLSTGS
Trigger: ACTCCCCGTGCTGAGGCAGCAGCAGCTGCCTGGGAG...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGCTCCAGGGACTCCGCTaGTTTGCTTTGTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQLQGLR*FALCTP
Trigger: AGGAGTGCACAAAGCAAAGCAGCGGAGTCCCTGGAG...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCTGCTGGGCCTCCCGGTaGCGATCCACCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPCWASR*RSTRVL
Trigger: CAGCACCCTGGTGGATCGGCACCGGGAGGCCCAGCA...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCAGCAGAAGCTGGTTCATaGCTGCTGGGCCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPAEAGS*LLGPLV
Trigger: AACCAGTGGGCCCAGCAGCCATGAACCAGCTTCTGC...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCGCATCTCGCTGGCCTaGCGCTCTTGTTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRRISLA*RSCSAA
Trigger: GGCAGCCGAACAAGAGCGCCAGGCCAGCGAGATGCG...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCAAGGCTCTGCTCTCCATaGGCTCTTAGGAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPRLCSP*ALRRRT
Trigger: GGTTCTCCTCCTAAGAGCTCATGGAGAGCAGAGCCT...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCGCTCATCGTGGCCTaGACTGCCCGCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIPLIVA*TARSSS
Trigger: GGAAGAGCTGCGGGCAGTTCAGGCCACGATGAGCGG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGAAGGACCCCCGCAACTaGTGGTTTTCTTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQKDPRN*WFSSCS
Trigger: GCTGCAAGAAGAAAACCAGCAGTTGCGGGGGTCCTT...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGTTAACACACTGTGGCTaGCAGGAGATGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQLTHCG*QEMVAK
Trigger: CTTGGCCACCATCTCCTGCCAGCCACAGTGTGTTAA...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCTCCCGCTGCAGCCGCTaGCTCAGGGACTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPSRCSR*LRDCSS
Trigger: GGAGCTACAGTCCCTGAGCCAGCGGCTGCAGCGGGA...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTCGAGCCAGCACCTGCTaGGCCTCCCGGTGCCGATCC +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPRASTC*ASRCRS
Trigger: GGATCGGCACCGGGAGGCCCAGCAGGTGCTGGCTCG...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACGTGTTGCCGTAGGCTaGCTGCCTCCCGGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIRVAVG*LPPGPL
Trigger: TAAGGGCCCGGGAGGCAGCCAGCCTACGGCAACACG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
3UTR CAA 72 bp AGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATaGCCTAGTGGCCAACACCCCCGCCCACCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RSIMSGEALPIP*PSGQHPRPPQP
Trigger: AGGCTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCAGCCACCTCGGCACTaGCTTTCTCACAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRQPPRH*LSHRPG
Trigger: TCCTGGCCTGTGAGAAAGGCAGTGCCGAGGTGGCTG...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCAGTGGCTGCTGCCTGCTaGTGCTTCTTTAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPVAAAC*CFFSSC
Trigger: ACAAGAGCTAAAGAAGCAGCAGCAGGCAGCAGCCAC...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATATGCCCATTCCAGCCTTaGCAGCACCCGCTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPICPFQP*QHPLQS
Trigger: CGACTGGAGCGGGTGCTGGCAAGGCTGGAATGGGCA...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCGGGCCTTTAAGGAGGTaGCTGGCTCCCTACACGGGG +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPGPLRR*LAPYTG
Trigger: CCCCGTGTAGGGAGCCAGGCACCTCCTTAAAGGCCC...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCATCGTGGCCTGAACTaGCCGCAGCTCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRHRGLN*PQLFLQ
Trigger: CTGGAGGAAGAGCTGCGGGCAGTTCAGGCCACGATG...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCTGGGCTCTGGGGTaGCCCCTGTTCTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPRWALG*PLFFWL
Trigger: CAACCAGAAGAACAGGGGCCACCCCAGAGCCCAGCG...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGACGGAGACCGCTGCTCTaGGAGGCCAGGAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRRRPLL*EARSFR
Trigger: GCGGAAGCTCCTGGCCTCCCAGAGCAGCGGTCTCCG...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATATCCAGAGCGGCCACTTaGGGGGATGCTGGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPISRAAT*GDAGAF
Trigger: AAAGGCCCCAGCATCCCCCCAAGTGGCCGCTCTGGA...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCGTCCTGTGGCTTTCCTaGTGGTCTCAGACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPVLWLS*WSQTLG
Trigger: GCCCAGCGTCTGAGACCATCAGGAAAGCCACAGGAC...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCTGAGGGCACACAGTaGGGCTGCCTCACTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIPEGTQ*GCLTPL
Trigger: AAGAGGAGTGAGGCAGCCTCACTGTGTGCCCTCAGG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCAACTTGGCTGCGGCTGTaGAAGAGACAGCTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPTWLRL*KRQLSK
Trigger: TTTTGACAGCTGTCTCTTGCACAGCCGCAGCCAAGT...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCGCCACCTGTGTaGTGGAGCAGGAGAAGATAC +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRPPPPV*WSRRRY
Trigger: GTATCTTCTCCTGCTCCAGCACACAGGTGGCGGTGG...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAACTCGGGCGCCTCGCTaGAGCAGCTGTGAGCAGATA +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPITRAPR*SSCEQI
Trigger: TATCTGCTCACAGCTGCTGCAGCGAGGCGCCCGAGT...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGATCCCTCTGCAACCTCTaGCGCTCCCGCCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRSLCNL*RSRPNS
Trigger: GGAGTTGGGGCGGGAGCGGCAGAGGTTGCAGAGGGA...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACAAGCCGAGCCAGCACCTaGTGGGCCTCCCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTSRAST*WASRCR
Trigger: TCGGCACCGGGAGGCCCAGCAGGTGCTGGCTCGGCT...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCATCGTGGCCTGAACTaGCCGCAGCTCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPHRGLN*PQLFLQ
Trigger: CTGGAGGAAGAGCTGCGGGCAGTTCAGGCCACGATG...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTGCGCTCTTGTTCGGCTaGCTGAGCGGCCAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEAALLFG*LSGQVP
Trigger: GGGGACCTGGCCGCTCAGGCAGCCGAACAAGAGCGC...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAGCCGTTTTCTCAAACTaGTCGGAGCGCCCCCGCATC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIAVFSN*SERPRI
Trigger: GATGCGGGGGCGCTCCGAGCAGTTTGAGAAAACGGC...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCCTGCCCATACCATTaGCTAGTGGCCAACACCCCC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIPCPYH*LVANTP
Trigger: GGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACGAACCCACCGGACTTaGCTGCGGCTGTGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIRTHRT*LRLCKR
Trigger: TCTCTTGCACAGCCGCAGCCAAGTCCGGTGGGTTCG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAGCTGGCAGGAGATGGTaGCCAAGTGTAGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIAGRRW*PSVGQC
Trigger: GCACTGCCCTACACTTGGCCACCATCTCCTGCCAGC...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAGTGGCTGGCAGGAGATaGTGGCCAAGTGTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIVAGRR*WPSVGQ
Trigger: CTGCCCTACACTTGGCCACCATCTCCTGCCAGCCAC...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTCCCGCGTCAGCTCCGTaGCTCAGGAGCAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPPASAP*LRSSSA
Trigger: GGCTGAACTGCTCCTGAGCCACGGAGCTGACGCGGG...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTCGGAGACCGCTGCTCTaGGAGGCCAGGAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEARRPLL*EARSFR
Trigger: GCGGAAGCTCCTGGCCTCCCAGAGCAGCGGTCTCCG...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAACGAGCCAGCACCTGCTaGGCCTCCCGGTGCCGATCC +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRERASTC*ASRCRS
Trigger: GGATCGGCACCGGGAGGCCCAGCAGGTGCTGGCTCG...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTCGCATCTCGCTGGCCTaGCGCTCTTGTTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPRISLA*RSCSAA
Trigger: GGCAGCCGAACAAGAGCGCCAGGCCAGCGAGATGCG...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGATCGCTGCAGCAGCTGTaGGCAGATAGCTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRSLQQL*ADSCVP
Trigger: GGGCACGCAGCTATCTGCTCACAGCTGCTGCAGCGA...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCTAGAGGCTCTCCTTaGGCCCCAGGAACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIPRGSP*APGTLF
Trigger: GAAAAGGGTTCCTGGGGCTCAAGGAGAGCCTCTAGG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTGATCCACCAGGGTGCTaGTGCAGGCCCGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEADPPGC*CRPAAP
Trigger: AGGAGCTGCGGGCCTGCATCAGCACCCTGGTGGATC...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTCCGCTCATCGTGGCCTaGACTGCCCGCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEAPLIVA*TARSSS
Trigger: GGAAGAGCTGCGGGCAGTTCAGGCCACGATGAGCGG...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACATCTTGTTCGGCTGCCTaGGCGGCCAGGTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTSCSAA*AARSPL
Trigger: GAGCGGGGACCTGGCCGCTCAGGCAGCCGAACAAGA...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCCACCGGACTTGGCTaGGGCTGTGCAAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLPTGLG*GCARDS
Trigger: GCTGTCTCTTGCACAGCCGCAGCCAAGTCCGGTGGG...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAAGGGCCTGCTGTAGGTaGCTCCACAGTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIRACCR*LHSALS
Trigger: AGACAAGGCACTGTGGAGGCACCTACAGCAGGCCCT...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAAAGCTGGTTCATGGCTaGTGGGCCCACTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIKLVHG*WAHWFS
Trigger: GCTGAACCAGTGGGCCCAGCAGCCATGAACCAGCTT...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTCTCCCAGGCAGCTGCTaGTGCCTCAGCACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEALPGSC*CLSTGS
Trigger: ACTCCCCGTGCTGAGGCAGCAGCAGCTGCCTGGGAG...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGCCAGCAAGTTACTGTTaGTCAGTCTCAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQPASYC*SVSVLT
Trigger: TGTCAGTACTGAGACTGAGCAACAGTAACTTGCTGG...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGACTGTAGCTCCCTCTaGAACCTCTGCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRDCSSL*NLCRSR
Trigger: GCGGGAGCGGCAGAGGTTGCAGAGGGAGCTACAGTC...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAGGGACTCCGCTGCTTTaGTTTGTGCACTCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIGTPLL*FVHSSR
Trigger: GCGAGAGGAGTGCACAAAGCAAAGCAGCGGAGTCCC...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGAGTTTTCTCGTGTTaGCGTAGGCTGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPRVFSC*RRLAAS
Trigger: GGAGGCAGCCAGCCTACGGCAACACGAGAAAACTCG...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAAGCCCCAATGAGATaGTCCATCTTCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPQAPMR*SIFSFS
Trigger: GCTGAAAGAGAAGATGGAGCATCTCATTGGGGCTTG...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCTGGGAATCCTGCAGCTaGAGGGCAAGGCGAGCATTT +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRWESCS*RARRAF
Trigger: AAATGCTCGCCTTGCCCTGCAGCTGCAGGATTCCCA...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCTTCTTCTGGGAATCCTaGAGCTGCAGGGCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRFFWES*SCRARR
Trigger: TCGCCTTGCCCTGCAGCTGCAGGATTCCCAGAAGAA...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAAGAAGATACGCTTCATaGCCGGGGTCGGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRRRYAS*PGSGPR
Trigger: CCGTGGCCCCGACCCCGGCCATGAAGCGTATCTTCT...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATATCAGATGGAGAGGCCTaGGATGCGAGATCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPISDGEA*DARSGC
Trigger: GCACCCAGATCTCGCATCCCAGGCCTCTCCATCTGA...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCGCTGGGCTCTGGGGTaGCCCCTGTTCTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLRWALG*PLFFWL
Trigger: CAACCAGAAGAACAGGGGCCACCCCAGAGCCCAGCG...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTGATGGTCTCAGACGCTaGGCTCTGGGGTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEADGLRR*ALGWPL
Trigger: CAGGGGCCACCCCAGAGCCCAGCGTCTGAGACCATC...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCGCAGAAGCTGGTTCATaGCTGCTGGGCCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPAEAGS*LLGPLV
Trigger: AACCAGTGGGCCCAGCAGCCATGAACCAGCTTCTGC...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTGCGCCTGTGGCTTaGGCACAAACTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLPAPVA*AQTPAA
Trigger: TGCAGCGGGAGTTTGTGCCCAAGCCACAGGCGCAGG...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCAGCTTTCCGATCTCCTaGCTCTTCCCGCTCATCGTG +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRSFPIS*LFPLIV
Trigger: CACGATGAGCGGGAAGAGCCAGGAGATCGGAAAGCT...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTCGTGTTGCCGTAGGCTaGCTGCCTCCCGGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEARVAVG*LPPGPL
Trigger: TAAGGGCCCGGGAGGCAGCCAGCCTACGGCAACACG...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACAGCCCCCGCATCTCGCTaGCCTGGCGCTCTTGTTCGG +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTAPASR*PGALVR
Trigger: CCGAACAAGAGCGCCAGGCCAGCGAGATGCGGGGGC...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGGAGATGATCTCTTCATaGTTCTTCTGGGAATCCTGC +
Preference number: 4 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQEMISS*FFWESC
Trigger: GCAGGATTCCCAGAAGAACCATGAAGAGATCATCTC...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGGAGCAGATAGCTGCGTaGCCACCCAGCGATGCGATC +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLEQIAA*PPSDAI
Trigger: GATCGCATCGCTGGGTGGGCACGCAGCTATCTGCTC...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTGAGCAGATAGCTGCGTaGCCACCCAGCGATGCGATC +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPEQIAA*PPSDAI
Trigger: GATCGCATCGCTGGGTGGGCACGCAGCTATCTGCTC...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACGCCGGCTCAGGGCCTaGTGTAGGTGCCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTRRLRA*CRCLHS
Trigger: ACTGTGGAGGCACCTACAGCAGGCCCTGAGCCGGCG...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGAGGACCCCTAGCTCCTaGGCCTGCTCTCGAATCTGG +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLRTPSS*ACSRIW
Trigger: CCAGATTCGAGAGCAGGCGCAGGAGCTAGGGGTCCT...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACCAGCAAGTTACTGTTaGTCAGTCTCAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPPASYC*SVSVLT
Trigger: TGTCAGTACTGAGACTGAGCAACAGTAACTTGCTGG...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCTCCAGGGACTCCGCTaGTTTGCTTTGTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPLQGLR*FALCTP
Trigger: AGGAGTGCACAAAGCAAAGCAGCGGAGTCCCTGGAG...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTGGGCCTTTAAGGAGGTaGCTGGCTCCCTACACGGGG +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEAGPLRR*LAPYTG
Trigger: CCCCGTGTAGGGAGCCAGGCACCTCCTTAAAGGCCC...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAAGCTTCCCCAGGTCTTaGTCCAGAGCGGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRSFPRS*SRAATW
Trigger: CCAAGTGGCCGCTCTGGAGCAAGACCTGGGGAAGCT...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGCCGTTTTCTCAAACTaGTCGGAGCGCCCCCGCATC +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRAVFSN*SERPRI
Trigger: GATGCGGGGGCGCTCCGAGCAGTTTGAGAAAACGGC...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATATGGGAATCCTGCAGCTaGAGGGCAAGGCGAGCATTT +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIWESCS*RARRAF
Trigger: AAATGCTCGCCTTGCCCTGCAGCTGCAGGATTCCCA...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGACCCTGCCCATACCATTaGCTAGTGGCCAACACCCCC +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRPCPYH*LVANTP
Trigger: GGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGG...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATATCGAGTCAAGCTTGGTaGGTCGGGCAGATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPISSQAW*VGQISW
Trigger: CCAGGAAATCTGCCCGACCCACCAAGCTTGACTCGA...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCGGCTGCCCAGTGCAATaGACTACGGTTTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRGCPVQ*TTVFCI
Trigger: GATGCAGAAAACCGTAGTCCATTGCACTGGGCAGCC...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTTGCCTGGGGCTCAGATaGAGAGGCCTGGGATGCGAG +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEACLGLR*RGLGCE
Trigger: CTCGCATCCCAGGCCTCTCCATCTGAGCCCCAGGCA...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTGGAGGAGAACCTGCCTaGGGCTCAGATGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEAGGEPA*GSDGEA
Trigger: GGCCTCTCCATCTGAGCCCCAGGCAGGTTCTCCTCC...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATATGGCCCCTGTTCTTCTaGTTGGGACCTTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIWPLFF*LGPSMD
Trigger: GTCCATGGAAGGTCCCAACCAGAAGAACAGGGGCCA...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGATCAGACGCTGGGCTCTaGGGTGGCCCCTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRSDAGL*GGPCSS
Trigger: AGAAGAACAGGGGCCACCCCAGAGCCCAGCGTCTGA...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACAGATGGTCTCAGACGCTaGGCTCTGGGGTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTDGLRR*ALGWPL
Trigger: CAGGGGCCACCCCAGAGCCCAGCGTCTGAGACCATC...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCCTCTCTGGACTCCTaGGAAGGAACCTCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIPSLDS*EGTSGF
Trigger: GAAACCTGAGGTTCCTTCCCAGGAGTCCAGAGAGGG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATATTAGGGCTCCCTCTCTaGACTCCTGGGAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPILGLPL*TPGKEP
Trigger: AGGTTCCTTCCCAGGAGTCCAGAGAGGGAGCCCTAA...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCCCGCTGCAGCCGCTaGCTCAGGGACTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRESRCSR*LRDCSS
Trigger: GGAGCTACAGTCCCTGAGCCAGCGGCTGCAGCGGGA...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTCTGGACCTGCGCCTGTaGCTTGGGCACAAACTCCCG +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEALDLRL*LGHKLP
Trigger: CGGGAGTTTGTGCCCAAGCCACAGGCGCAGGTCCAG...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGACGCAACTGCTGTAGCTaGACCTGCGCCTGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRRNCCS*TCACGL
Trigger: CAAGCCACAGGCGCAGGTCCAGCTACAGCAGTTGCG...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGTCTTCCCGCTCATCGTaGCCTGAACTGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLSSRSS*PELPAA
Trigger: AGCTGCGGGCAGTTCAGGCCACGATGAGCGGGAAGA...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAAGCTTTCCGATCTCCTaGCTCTTCCCGCTCATCGTG +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPISFPIS*LFPLIV
Trigger: CACGATGAGCGGGAAGAGCCAGGAGATCGGAAAGCT...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGTGGGAACTCTCCTTCTaGCCAGCAGGCAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLWELSF*PAGSWS
Trigger: TGACCAGCTGCCTGCTGGTCAGAAGGAGAGTTCCCA...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCTCGGCAAGCCCCAATaGGATGCTCCATCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPLGKPQ*DAPSSL
Trigger: AAGAGAAGATGGAGCATCTCATTGGGGCTTGCCGAG...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACTCGGCAAGCCCCAATaGGATGCTCCATCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPILGKPQ*DAPSSL
Trigger: AAGAGAAGATGGAGCATCTCATTGGGGCTTGCCGAG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACCCACCGGACTTGGCTaGGGCTGTGCAAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTPTGLG*GCARDS
Trigger: GCTGTCTCTTGCACAGCCGCAGCCAAGTCCGGTGGG...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGACAGGCCTTTGGAGGCTaGCAGATGAAACGGGGACTG +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRQAFGG*QMKRGL
Trigger: CAGTCCCCGTTTCATCTGGCAGCCTCCAAAGGCCTG...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR GCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTGTGCCCACCCAGCGATaGGATCATCAGGGGTGTACG +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEAVPTQR*DHQGCT
Trigger: CGTACACCCCTGATGATCGCATCGCTGGGTGGGCAC...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGAGGGCCTGCTGTAGGTaGCTCCACAGTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLRACCR*LHSALS
Trigger: AGACAAGGCACTGTGGAGGCACCTACAGCAGGCCCT...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCTTTTGCACCAGCTCCTaGTCCAGCCGAACAACTTTC +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRFCTSS*SSRTTF
Trigger: GAAAGTTGTTCGGCTGGAGCAGGAGCTGGTGCAAAA...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAGTGGCTGCTGCCTGCTaGTGCTTCTTTAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIVAAAC*CFFSSC
Trigger: ACAAGAGCTAAAGAAGCAGCAGCAGGCAGCAGCCAC...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCATTGGTAGTCAGTTaGTGTCCTGTGGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRPLVVS*CPVAFL
Trigger: CAGGAAAGCCACAGGACAGCAACTGACTACCAATGG...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAAGGGCCAAAGGTCTGTaGCCCATTGGTAGTCAGTTG +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIRAKGL*PIGSQL
Trigger: CAACTGACTACCAATGGGGCACAGACCTTTGGCCCT...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCAGGGCCAAAGGTCTGTaGCCCATTGGTAGTCAGTTG +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPRAKGL*PIGSQL
Trigger: CAACTGACTACCAATGGGGCACAGACCTTTGGCCCT...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAATGCCCATTCCAGCCTTaGCAGCACCCGCTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRECPFQP*QHPLQS
Trigger: CGACTGGAGCGGGTGCTGGCAAGGCTGGAATGGGCA...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGACACTCTGTCGCAACTaGTGTAGCTGGACCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLTLCRN*CSWTCA
Trigger: GGCGCAGGTCCAGCTACAGCAGTTGCGACAGAGTGT...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAAAGAAGATACGCTTCATaGCCGGGGTCGGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRERRYAS*PGSGPR
Trigger: CCGTGGCCCCGACCCCGGCCATGAAGCGTATCTTCT...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGACCGCCACCTGTGTGCTaGAGCAGGAGAAGATACGCT +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRPPPVC*SRRRYA
Trigger: AGCGTATCTTCTCCTGCTCCAGCACACAGGTGGCGG...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACATTCGAGTCAAGCTTaGTGGGTCGGGCAGATTTCC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIHSSQA*WVGQIS
Trigger: GGAAATCTGCCCGACCCACCAAGCTTGACTCGAATG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAGGCTGCCCAGTGCAATaGACTACGGTTTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIGCPVQ*TTVFCI
Trigger: GATGCAGAAAACCGTAGTCCATTGCACTGGGCAGCC...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCCTGTTCTTCTGGTTaGGACCTTCCATGGACTTCA +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRPCSSG*DLPWTS
Trigger: TGAAGTCCATGGAAGGTCCCAACCAGAAGAACAGGG...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACCTGCGCCTGTGGCTTaGGCACAAACTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTPAPVA*AQTPAA
Trigger: TGCAGCGGGAGTTTGTGCCCAAGCCACAGGCGCAGG...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGGATCTTTCCTGGGGCTaGGTCCTCAGCCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLDLSWG*VLSLLW
Trigger: CCAAAGAAGGCTGAGGACTCAGCCCCAGGAAAGATC...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAAGTCCTGTGGCTTTCCTaGTGGTCTCAGACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNREVLWLS*WSQTLG
Trigger: GCCCAGCGTCTGAGACCATCAGGAAAGCCACAGGAC...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGAATCTCGTATCCCTaGGGGCACACAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPRISYP*GHTVRL
Trigger: CAGCCTCACTGTGTGCCCTCAGGGATACGAGATTCT...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAGTCCATAATGTCAGGTaGAGCCCTGCCCATACCATT +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIVHNVR*SPAHTI
Trigger: AATGGTATGGGCAGGGCTTCACCTGACATTATGGAC...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAACTTGGCTGCGGCTGTaGAAGAGACAGCTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPITWLRL*KRQLSK
Trigger: TTTTGACAGCTGTCTCTTGCACAGCCGCAGCCAAGT...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAAGTGCCCACCCAGCGATaGGATCATCAGGGGTGTACG +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNREVPTQR*DHQGCT
Trigger: CGTACACCCCTGATGATCGCATCGCTGGGTGGGCAC...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGCTCCTGCGCCTaGTCTCGAATCTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLPSSCA*SRIWFS
Trigger: TGAGAACCAGATTCGAGAGCAGGCGCAGGAGCTAGG...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTCCTAGCTCCTGCGCCTaGTCTCGAATCTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPPSSCA*SRIWFS
Trigger: TGAGAACCAGATTCGAGAGCAGGCGCAGGAGCTAGG...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGTCCTTAGGACAACCCTaGTCCATGCCATCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLSLGQP*SMPSPP
Trigger: TGGAGGGGATGGCATGGAGCAGGGTTGTCCTAAGGA...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGTGCTGGTTTTCTTCTTaGAGCCGAGCCAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLCWFSS*SRASTC
Trigger: GCAGGTGCTGGCTCGGCTGCAAGAAGAAAACCAGCA...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTCGAGTTTTCTCGTGTTaGCGTAGGCTGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEARVFSC*RRLAAS
Trigger: GGAGGCAGCCAGCCTACGGCAACACGAGAAAACTCG...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGATTCTTCTGGGAATCCTaGAGCTGCAGGGCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRFFWES*SCRARR
Trigger: TCGCCTTGCCCTGCAGCTGCAGGATTCCCAGAAGAA...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCATTCTGTCAGGCCTTTaGAGGCTGCCAGATGAAACG +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPILSGL*RLPDET
Trigger: CGTTTCATCTGGCAGCCTCCAAAGGCCTGACAGAAT...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGTCCAGGAAGGCTTCGTaGTCACACAGCAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLSRKAS*SHSRST
Trigger: TGTGCTCCTGCTGTGTGACCACGAAGCCTTCCTGGA...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTTCAGATGGAGAGGCCTaGGATGCGAGATCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEASDGEA*DARSGC
Trigger: GCACCCAGATCTCGCATCCCAGGCCTCTCCATCTGA...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATGGACTTCATACTaGATCTTTCCTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIPWTSY*IFPGAE
Trigger: CTCAGCCCCAGGAAAGATCCAGTATGAAGTCCATGG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCCTCTCTGGACTCCTaGGAAGGAACCTCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLPSLDS*EGTSGF
Trigger: GAAACCTGAGGTTCCTTCCCAGGAGTCCAGAGAGGG...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACGCAACTGCTGTAGCTaGACCTGCGCCTGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTRNCCS*TCACGL
Trigger: CAAGCCACAGGCGCAGGTCCAGCTACAGCAGTTGCG...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTTCCGCAGCTTCTCTGTaGCCTCCTTCTCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEASAASL*PPSPWP
Trigger: TGGCCATGGAGAAGGAGGCCACAGAGAAGCTGCGGA...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTGACCCCCGCAACTGCTaGTTTTCTTCTTGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPDPRNC*FSSCSR
Trigger: TCGGCTGCAAGAAGAAAACCAGCAGTTGCGGGGGTC...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTAGGCTCTGCTCTCCATaGGCTCTTAGGAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEARLCSP*ALRRRT
Trigger: GGTTCTCCTCCTAAGAGCTCATGGAGAGCAGAGCCT...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTGATCTTTCCTGGGGCTaGGTCCTCAGCCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEADLSWG*VLSLLW
Trigger: CCAAAGAAGGCTGAGGACTCAGCCCCAGGAAAGATC...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTGAGGAGGCTGCCCAGTaGAATGGACTACGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPEEAAQ*NGLRFS
Trigger: AGAAAACCGTAGTCCATTGCACTGGGCAGCCTCCTC...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAAAGGTCCAGATAGGCTaGAGCTTGAGTCTTACACTC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIKVQIG*SLSLTL
Trigger: GAGTGTAAGACTCAAGCTGCAGCCTATCTGGACCTT...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACAAAGCTGGTTCATGGCTaGTGGGCCCACTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTKLVHG*WAHWFS
Trigger: GCTGAACCAGTGGGCCCAGCAGCCATGAACCAGCTT...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAAACACTCTGTCGCAACTaGTGTAGCTGGACCTGCGCC +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRETLCRN*CSWTCA
Trigger: GGCGCAGGTCCAGCTACAGCAGTTGCGACAGAGTGT...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAAAGGACCCCCGCAACTaGTGGTTTTCTTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRKDPRN*WFSSCS
Trigger: GCTGCAAGAAGAAAACCAGCAGTTGCGGGGGTCCTT...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCTCTTTCAGCAGCTCTaGCGTTTTCTCAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPLFQQL*RFLKLL
Trigger: GAGCAGTTTGAGAAAACGGCAGAGCTGCTGAAAGAG...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCAAGCCCCAATGAGATaGTCCATCTTCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPQAPMR*SIFSFS
Trigger: GCTGAAAGAGAAGATGGAGCATCTCATTGGGGCTTG...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGTGTCAGGTGAAGCCCTaGCCATACCATTGCCTAGTG +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLCQVKP*PYHCLV
Trigger: CACTAGGCAATGGTATGGGCAGGGCTTCACCTGACA...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCGGTTGGGACCTTCCATaGACTTCATACTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRGWDLP*TSYWIF
Trigger: AAAGATCCAGTATGAAGTCCATGGAAGGTCCCAACC...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTTGGCCCCTGTTCTTCTaGTTGGGACCTTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEAWPLFF*LGPSMD
Trigger: GTCCATGGAAGGTCCCAACCAGAAGAACAGGGGCCA...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACATCCGCAGCTTCTCTGTaGCCTCCTTCTCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTSAASL*PPSPWP
Trigger: TGGCCATGGAGAAGGAGGCCACAGAGAAGCTGCGGA...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGAGCTCCTCCCTTAGTTaGAGCAGAAGCTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLSSSLS*SRSWFM
Trigger: CATGAACCAGCTTCTGCTTCAACTAAGGGAGGAGCT...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACAAGAATCTCGTATCCCTaGGGGCACACAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTRISYP*GHTVRL
Trigger: CAGCCTCACTGTGTGCCCTCAGGGATACGAGATTCT...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAACTTAGGAGGAGAACCTaGCTGGGGCTCAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRELRRRT*LGLRWR
Trigger: TCTCCATCTGAGCCCCAGGCAGGTTCTCCTCCTAAG...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCCTTAGGACAACCCTaGTCCATGCCATCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRESLGQP*SMPSPP
Trigger: TGGAGGGGATGGCATGGAGCAGGGTTGTCCTAAGGA...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTGCTGCTGCCTGCTGCTaGTTCTTTAGCTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPAAACC*FFSSCV
Trigger: TACACAAGAGCTAAAGAAGCAGCAGCAGGCAGCAGC...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGGCTGCTGCCTGCTGCTaGTTCTTTAGCTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLAAACC*FFSSCV
Trigger: TACACAAGAGCTAAAGAAGCAGCAGCAGGCAGCAGC...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTACTGTGGCTGCTGCCTaGTGCTGCTTCTTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEATVAAA*CCFFSS
Trigger: AGAGCTAAAGAAGCAGCAGCAGGCAGCAGCCACAGT...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGATGGATTTACTGTGGCTaGTGCCTGCTGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRWIYCG*CLLLLL
Trigger: AAGAAGCAGCAGCAGGCAGCAGCCACAGTAAATCCA...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTTGGATTTACTGTGGCTaGTGCCTGCTGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPWIYCG*CLLLLL
Trigger: AAGAAGCAGCAGCAGGCAGCAGCCACAGTAAATCCA...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGACCATTGGTAGTCAGTTaGTGTCCTGTGGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRPLVVS*CPVAFL
Trigger: CAGGAAAGCCACAGGACAGCAACTGACTACCAATGG...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTCTGGTTCAGCCACTGTaGCTCCTGGTTCAACTCCTA +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEALVQPL*LLVQLL
Trigger: TAGGAGTTGAACCAGGAGGCACAGTGGCTGAACCAG...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAATGCTGGTTTTCTTCTTaGAGCCGAGCCAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRECWFSS*SRASTC
Trigger: GCAGGTGCTGGCTCGGCTGCAAGAAGAAAACCAGCA...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATAACCTCTTCTGAAAGCTaGTCCAGCTTCTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: GSRFSGLRSIMSGEALPITSSES*SSFFNN
Trigger: GTTGTTGAAGAAGCTGGAGCAGCTTTCAGAAGAGGT...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTTGTCAGGTGAAGCCCTaGCCATACCATTGCCTAGTG +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEACQVKP*PYHCLV
Trigger: CACTAGGCAATGGTATGGGCAGGGCTTCACCTGACA...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCCAGGAAGGCTTCGTaGTCACACAGCAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRESRKAS*SHSRST
Trigger: TGTGCTCCTGCTGTGTGACCACGAAGCCTTCCTGGA...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGATACTGGATTTACTGTaGCTGCTGCCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLILDLL*LLPAAA
Trigger: AGCAGCAGCAGGCAGCAGCCACAGTAAATCCAGTAT...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTCCCTGTTCTTCTGGTTaGGACCTTCCATGGACTTCA +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPPCSSG*DLPWTS
Trigger: TGAAGTCCATGGAAGGTCCCAACCAGAAGAACAGGG...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACATTAGGGCTCCCTCTCTaGACTCCTGGGAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTLGLPL*TPGKEP
Trigger: AGGTTCCTTCCCAGGAGTCCAGAGAGGGAGCCCTAA...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACAGACCCCCGCAACTGCTaGTTTTCTTCTTGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTDPRNC*FSSCSR
Trigger: TCGGCTGCAAGAAGAAAACCAGCAGTTGCGGGGGTC...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACAGCTCAGTCTCAGTACTaGCATCTCCTTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTAQSQY*HLLLQL
Trigger: CAGCTGGAGAAGGAGATGTCAGTACTGAGACTGAGC...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCTGGACTACGGTTTTCTaGATCCACAGCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPWTTVF*IHSIFI
Trigger: AATGAAGATGCTGTGGATGCAGAAAACCGTAGTCCA...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTTTTTGCACCAGCTCCTaGTCCAGCCGAACAACTTTC +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEAFCTSS*SSRTTF
Trigger: GAAAGTTGTTCGGCTGGAGCAGGAGCTGGTGCAAAA...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAAACTGTGGCTGCTGCCTaGTGCTGCTTCTTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRETVAAA*CCFFSS
Trigger: AGAGCTAAAGAAGCAGCAGCAGGCAGCAGCCACAGT...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAACTGGTTCAGCCACTGTaGCTCCTGGTTCAACTCCTA +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRELVQPL*LLVQLL
Trigger: TAGGAGTTGAACCAGGAGGCACAGTGGCTGAACCAG...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGACTCTTTCAGCAGCTCTaGCGTTTTCTCAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRLFQQL*RFLKLL
Trigger: GAGCAGTTTGAGAAAACGGCAGAGCTGCTGAAAGAG...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTCCTCATTCTTGCTGTTaGTGTCAGCCCCATTTGCAA +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEAPHSCC*CQPHLQ
Trigger: TTGCAAATGGGGCTGACATCAACAGCAAGAATGAGG...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR TCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACAAGCTCCTCCCTTAGTTaGAGCAGAAGCTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTSSSLS*SRSWFM
Trigger: CATGAACCAGCTTCTGCTTCAACTAAGGGAGGAGCT...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTTCTTCAACAACTCCTTaGTCTTGGCTTCCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPSSTTP*SWLPCL
Trigger: GAGACAAGGAAGCCAAGATCAAGGAGTTGTTGAAGA...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGATCTTCAACAACTCCTTaGTCTTGGCTTCCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRSSTTP*SWLPCL
Trigger: GAGACAAGGAAGCCAAGATCAAGGAGTTGTTGAAGA...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGTCCTGTAGGTGGAGATaGTCTCTTCATGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLSCRWR*SLHGSS
Trigger: AGAAGAACCATGAAGAGATCATCTCCACCTACAGGA...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAAGTCCATAATGTCAGGTaGAGCCCTGCCCATACCATT +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNREVHNVR*SPAHTI
Trigger: AATGGTATGGGCAGGGCTTCACCTGACATTATGGAC...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAACCATGGACTTCATACTaGATCTTTCCTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNREPWTSY*IFPGAE
Trigger: CTCAGCCCCAGGAAAGATCCAGTATGAAGTCCATGG...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAGATGATCTCTTCATaGTTCTTCTGGGAATCCTGC +
Preference number: 4 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNREMISS*FFWESC
Trigger: GCAGGATTCCCAGAAGAACCATGAAGAGATCATCTC...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR TCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTTCCTGTAGGTGGAGATaGTCTCTTCATGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEASCRWR*SLHGSS
Trigger: AGAAGAACCATGAAGAGATCATCTCCACCTACAGGA...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACAGATGTCAGCCCCATTTaGAAGCAGGATAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTDVSPI*KQDSQT
Trigger: TGTCTGACTATCCTGCTTGCAAATGGGGCTGACATC...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR GCA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTTGGACTACGGTTTTCTaGATCCACAGCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPWTTVF*IHSIFI
Trigger: AATGAAGATGCTGTGGATGCAGAAAACCGTAGTCCA...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAAAAGGTCCAGATAGGCTaGAGCTTGAGTCTTACACTC +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNREKVQIG*SLSLTL
Trigger: GAGTGTAAGACTCAAGCTGCAGCCTATCTGGACCTT...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTACCTCTTCTGAAAGCTaGTCCAGCTTCTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEATSSES*SSFFNN
Trigger: GTTGTTGAAGAAGCTGGAGCAGCTTTCAGAAGAGGT...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CCA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACAGGTTGGGACCTTCCATaGACTTCATACTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTGWDLP*TSYWIF
Trigger: AAAGATCCAGTATGAAGTCCATGGAAGGTCCCAACC...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTTCCATGCTAAGGATTTaGAGCAGGATATTGTACACT +
Preference number: 4 (lower is better)
Translates to: GFLIPTENLVSLRAHSEASMLRI*SRILYT
Trigger: AGTGTACAATATCCTGCTGCAAATCCTTAGCATGGA...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR GCA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCCATGCTAAGGATTTaGAGCAGGATATTGTACACT +
Preference number: 4 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRESMLRI*SRILYT
Trigger: AGTGTACAATATCCTGCTGCAAATCCTTAGCATGGA...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp CTCGGAGCGCCCCCGCATCTCGCTGGCCTGGCGCTCTTGTTCGGCTaGCTGAGCGGCCAGGTCCCCGCTCCGGCGGCGCTCCTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: LGAPPHLAGLALLFG*LSGQVPAPAALLGH
Trigger: GTGGCCGAGGAGCGCCGCCGGAGCGGGGACCTGGCCGCTCAGGCAGCCGAACAAGAGCGCCAGGCCAGCGAGATGCGGGGGCGCTCCGAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 90 bp TGGACCTGCGCCTGTGGCTTGGGCACAAACTCCCGCTGCAGCCGCTaGCTCAGGGACTGTAGCTCCCTCTGCAACCTCTGCCGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: WTCACGLGTNSRCSR*LRDCSSLCNLCRSR
Trigger: GCGGGAGCGGCAGAGGTTGCAGAGGGAGCTACAGTCCCTGAGCCAGCGGCTGCAGCGGGAGTTTGTGCCCAAGCCACAGGCGCAGGTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 90 bp AGGTCTGCGGGCAGGCAGTCCCACAGCCCTCGGAGACCGCTGCTCTaGGAGGCCAGGAGCTTCCGCAGCTTCTCTGTGGCCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RSAGRQSHSPRRPLL*EARSFRSFSVASFS
Trigger: GGAGAAGGAGGCCACAGAGAAGCTGCGGAAGCTCCTGGCCTCCCAGAGCAGCGGTCTCCGAGGGCTGTGGGACTGCCTGCCCGCAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 90 bp CCCCGCAACTGCTGGTTTTCTTCTTGCAGCCGAGCCAGCACCTGCTaGGCCTCCCGGTGCCGATCCACCAGGGTGCTGATGCAGGCCCGC +
Preference number: 5 (lower is better)
Translates to: PRNCWFSSCSRASTC*ASRCRSTRVLMQAR
Trigger: GCGGGCCTGCATCAGCACCCTGGTGGATCGGCACCGGGAGGCCCAGCAGGTGCTGGCTCGGCTGCAAGAAGAAAACCAGCAGTTGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp CGCTGCAGCCGCTGGCTCAGGGACTGTAGCTCCCTCTGCAACCTCTaGCGCTCCCGCCCCAACTCCCCTAACTCCTCCAGCAAGTTACTG +
Preference number: 5 (lower is better)
Translates to: RCSRWLRDCSSLCNL*RSRPNSPNSSSKLL
Trigger: CAGTAACTTGCTGGAGGAGTTAGGGGAGTTGGGGCGGGAGCGGCAGAGGTTGCAGAGGGAGCTACAGTCCCTGAGCCAGCGGCTGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp TGCTGTAGCTGGACCTGCGCCTGTGGCTTGGGCACAAACTCCCGCTaGAGCCGCTGGCTCAGGGACTGTAGCTCCCTCTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: CCSWTCACGLGTNSR*SRWLRDCSSLCNLC
Trigger: GCAGAGGTTGCAGAGGGAGCTACAGTCCCTGAGCCAGCGGCTGCAGCGGGAGTTTGTGCCCAAGCCACAGGCGCAGGTCCAGCTACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 90 bp CCTGGGCCACCAGCGAACCCCGAGTTTTCTCGTGTTGCCGTAGGCTaGCTGCCTCCCGGGCCCTTAGCTCAGCCACTTCCTCTGTGGCTT +
Preference number: 5 (lower is better)
Translates to: PGPPANPEFSRVAVG*LPPGPLAQPLPLWL
Trigger: AAGCCACAGAGGAAGTGGCTGAGCTAAGGGCCCGGGAGGCAGCCAGCCTACGGCAACACGAGAAAACTCGGGGTTCGCTGGTGGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGCAGCTTCCCCAGGTCTaGCTCCAGAGCGGCCACTTG +
Preference number: 5 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQQLPQV*LQSGHL
Trigger: CAAGTGGCCGCTCTGGAGCAAGACCTGGGGAAGCTG...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGGCCCTGCCCATACCATaGCCTAGTGGCCAACACCCC +
Preference number: 5 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQALPIP*PSGQHP
Trigger: GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGC...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 90 bp AGGCTGCCAGATGAAACGGGGACTGGCCATTCGAGTCAAGCTTGGTaGGTCGGGCAGATTTCCTGGAGGCCAGGGCAGCCACGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: RLPDETGTGHSSQAW*VGQISWRPGQPRVP
Trigger: TGGGACGCGTGGCTGCCCTGGCCTCCAGGAAATCTGCCCGACCCACCAAGCTTGACTCGAATGGCCAGTCCCCGTTTCATCTGGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS CCA 90 bp TGGAGGCTGCCAGATGAAACGGGGACTGGCCATTCGAGTCAAGCTTaGTGGGTCGGGCAGATTTCCTGGAGGCCAGGGCAGCCACGCGTC +
Preference number: 5 (lower is better)
Translates to: WRLPDETGTGHSSQA*WVGQISWRPGQPRV
Trigger: GACGCGTGGCTGCCCTGGCCTCCAGGAAATCTGCCCGACCCACCAAGCTTGACTCGAATGGCCAGTCCCCGTTTCATCTGGCAGCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CAA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCATCTCCAGCTGTCCCTTaGCCAGGCCTCCTAGGGCCT +
Preference number: 5 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPSPAVP*PGLLGP
Trigger: AGGCCCTAGGAGGCCTGGCAAAGGGACAGCTGGAGA...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGCTGCTGGTTTTCTTCTaGCAGCCGAGCCAGCACCTG +
Preference number: 5 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQLLVFF*QPSQHL
Trigger: CAGGTGCTGGCTCGGCTGCAAGAAGAAAACCAGCAG...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS TCA 90 bp TGCTTCAGCTTTCCGATCTCCTGGCTCTTCCCGCTCATCGTGGCCTaGACTGCCCGCAGCTCTTCCTCCAGCTTCCCCAGGTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: CFSFPISWLFPLIVA*TARSSSSSFPRSCS
Trigger: GGAGCAAGACCTGGGGAAGCTGGAGGAAGAGCTGCGGGCAGTTCAGGCCACGATGAGCGGGAAGAGCCAGGAGATCGGAAAGCTGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 90 bp AGTTCATTTGTCAGCAGCCCCACACTCTGTCGCAACTGCTGTAGCTaGACCTGCGCCTGTGGCTTGGGCACAAACTCCCGCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SSFVSSPTLCRNCCS*TCACGLGTNSRCSR
Trigger: GCGGCTGCAGCGGGAGTTTGTGCCCAAGCCACAGGCGCAGGTCCAGCTACAGCAGTTGCGACAGAGTGTGGGGCTGCTGACAAATGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGTGCCTCCACAGTGCCTaGTCTTGTGTGTGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQCLHSA*SCVCRA
Trigger: TGCTCTGCACACACAAGACAAGGCACTGTGGAGGCA...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCACCTGCGCCTGTGGCTaGGGCACAAACTCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRTCACG*GTNSRC
Trigger: GCAGCGGGAGTTTGTGCCCAAGCCACAGGCGCAGGT...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp TCCATGGCCAGTTCATTTGTCAGCAGCCCCACACTCTGTCGCAACTaGTGTAGCTGGACCTGCGCCTGTGGCTTGGGCACAAACTCCCGC +
Preference number: 5 (lower is better)
Translates to: SMASSFVSSPTLCRN*CSWTCACGLGTNSR
Trigger: GCGGGAGTTTGTGCCCAAGCCACAGGCGCAGGTCCAGCTACAGCAGTTGCGACAGAGTGTGGGGCTGCTGACAAATGAACTGGCCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCGAACCCACCGGACTaGGCTGCGGCTGTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIPNPPD*AAAVQE
Trigger: CTCTTGCACAGCCGCAGCCAAGTCCGGTGGGTTCGG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACCATGGCCAGTTCATTaGTCAGCAGCCCCACACTCT +
Preference number: 5 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPPWPVH*SAAPHS
Trigger: AGAGTGTGGGGCTGCTGACAAATGAACTGGCCATGG...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGCTGGCCTGGCGCTCTaGTTCGGCTGCCTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRAGLAL*FGCLSG
Trigger: GCCGCTCAGGCAGCCGAACAAGAGCGCCAGGCCAGC...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTGCTGGCCTGGCGCTCTaGTTCGGCTGCCTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPAGLAL*FGCLSG
Trigger: GCCGCTCAGGCAGCCGAACAAGAGCGCCAGGCCAGC...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp TTAACTCGGGCGCCTCGCTGCAGCAGCTGTGAGCAGATAGCTGCGTaGCCACCCAGCGATGCGATCATCAGGGGTGTACGTCCATCATTA +
Preference number: 5 (lower is better)
Translates to: LTRAPRCSSCEQIAA*PPSDAIIRGVRPSL
Trigger: TAATGATGGACGTACACCCCTGATGATCGCATCGCTGGGTGGGCACGCAGCTATCTGCTCACAGCTGCTGCAGCGAGGCGCCCGAGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp AGATGCTCCATCTTCTCTTTCAGCAGCTCTGCCGTTTTCTCAAACTaGTCGGAGCGCCCCCGCATCTCGCTGGCCTGGCGCTCTTGTTCG +
Preference number: 5 (lower is better)
Translates to: RCSIFSFSSSAVFSN*SERPRISLAWRSCS
Trigger: CGAACAAGAGCGCCAGGCCAGCGAGATGCGGGGGCGCTCCGAGCAGTTTGAGAAAACGGCAGAGCTGCTGAAAGAGAAGATGGAGCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCACAGCAGGAGCACACTaGAGGCACAGCCAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRTAGAH*RHSQRR
Trigger: CCTCCTCTGGCTGTGCCTCAAGTGTGCTCCTGCTGT...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCAAAGGTCTGTGCCCCATaGGTAGTCAGTTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPKVCAP*VVSCCP
Trigger: AGGACAGCAACTGACTACCAATGGGGCACAGACCTT...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCTCCGCTGCTTTGCTTaGTGCACTCCTCTCGCCCAC +
Preference number: 5 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRLRCFA*CTPLAH
Trigger: GTGGGCGAGAGGAGTGCACAAAGCAAAGCAGCGGAG...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCATTGATCTTGGCTTCCTaGTCTCGGCAAGCCCCAATG +
Preference number: 5 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPLILAS*SRQAPM
Trigger: CATTGGGGCTTGCCGAGACAAGGAAGCCAAGATCAA...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS TCA 90 bp ATTCTTGTCTGTAACATTAACTCGGGCGCCTCGCTGCAGCAGCTGTaGGCAGATAGCTGCGTGCCCACCCAGCGATGCGATCATCAGGGG +
Preference number: 5 (lower is better)
Translates to: ILVCNINSGASLQQL*ADSCVPTQRCDHQG
Trigger: CCCCTGATGATCGCATCGCTGGGTGGGCACGCAGCTATCTGCTCACAGCTGCTGCAGCGAGGCGCCCGAGTTAATGTTACAGACAAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp GCCGATTTGTCATTCTTGTCTGTAACATTAACTCGGGCGCCTCGCTaGAGCAGCTGTGAGCAGATAGCTGCGTGCCCACCCAGCGATGCG +
Preference number: 5 (lower is better)
Translates to: ADLSFLSVTLTRAPR*SSCEQIAACPPSDA
Trigger: CGCATCGCTGGGTGGGCACGCAGCTATCTGCTCACAGCTGCTGCAGCGAGGCGCCCGAGTTAATGTTACAGACAAGAATGACAAATCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp CCGCGTCAGCTCCGTGGCTCAGGAGCAGTTCAGCCACCTCGGCACTaGCTTTCTCACAGGCCAGGATCAAAGCCGATTTGTCATTCTTGT +
Preference number: 5 (lower is better)
Translates to: PRQLRGSGAVQPPRH*LSHRPGSKPICHSC
Trigger: ACAAGAATGACAAATCGGCTTTGATCCTGGCCTGTGAGAAAGGCAGTGCCGAGGTGGCTGAACTGCTCCTGAGCCACGGAGCTGACGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp GCAGAAGCTGGTTCATGGCTGCTGGGCCCACTGGTTCAGCCACTGTaGCTCCTGGTTCAACTCCTAGAACCTGGGAACTCTCCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: AEAGSWLLGPLVQPL*LLVQLLEPGNSPSD
Trigger: GTCAGAAGGAGAGTTCCCAGGTTCTAGGAGTTGAACCAGGAGGCACAGTGGCTGAACCAGTGGGCCCAGCAGCCATGAACCAGCTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 90 bp TTGATGCTCCCTGGGGCTGCCTTTAGGGCTCCCTCTCTGGACTCCTaGGAAGGAACCTCAGGTTTCACCTGTAGTCCTGCCTTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: LMLPGAAFRAPSLDS*EGTSGFTCSPAFAH
Trigger: ATGGGCAAAGGCAGGACTACAGGTGAAACCTGAGGTTCCTTCCCAGGAGTCCAGAGAGGGAGCCCTAAAGGCAGCCCCAGGGAGCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTACCTGCGCCTGTGGCTaGGGCACAAACTCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPTCACG*GTNSRC
Trigger: GCAGCGGGAGTTTGTGCCCAAGCCACAGGCGCAGGT...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACTCCGCTGCTTTGCTTaGTGCACTCCTCTCGCCCAC +
Preference number: 5 (lower is better)
Translates to: GSRFSGLRSIMSGEALPILRCFA*CTPLAH
Trigger: GTGGGCGAGAGGAGTGCACAAAGCAAAGCAGCGGAG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCAGGGACTCCGCTGCTTaGCTTTGTGCACTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRRDSAA*LCALLS
Trigger: CGAGAGGAGTGCACAAAGCAAAGCAGCGGAGTCCCT...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGAACAACTCCTTGATCTaGGCTTCCTTGTCTCGGCAA +
Preference number: 5 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQNNSLI*ASLSRQ
Trigger: TTGCCGAGACAAGGAAGCCAAGATCAAGGAGTTGTT...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp CTGACCAGCAGGCAGCTGGTCAGCATGATCAGGGCCAAAGGTCTGTaGCCCATTGGTAGTCAGTTGCTGTCCTGTGGCTTTCCTGATGGT +
Preference number: 5 (lower is better)
Translates to: LTSRQLVSMIRAKGL*PIGSQLLSCGFPDG
Trigger: ACCATCAGGAAAGCCACAGGACAGCAACTGACTACCAATGGGGCACAGACCTTTGGCCCTGATCATGCTGACCAGCTGCCTGCTGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 90 bp AGGGGTGTACGTCCATCATTATCCAACACGTCCAGGAAGGCTTCGTaGTCACACAGCAGGAGCACACTTGAGGCACAGCCAGAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RGVRPSLSNTSRKAS*SHSRSTLEAQPEEA
Trigger: AGCCTCCTCTGGCTGTGCCTCAAGTGTGCTCCTGCTGTGTGACCACGAAGCCTTCCTGGACGTGTTGGATAATGATGGACGTACACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 90 bp ACACTGCAGCAAGCTCCTCCCTTAGTTGAAGCAGAAGCTGGTTCATaGCTGCTGGGCCCACTGGTTCAGCCACTGTGCCTCCTGGTTCAA +
Preference number: 5 (lower is better)
Translates to: TLQQAPPLVEAEAGS*LLGPLVQPLCLLVQ
Trigger: TTGAACCAGGAGGCACAGTGGCTGAACCAGTGGGCCCAGCAGCCATGAACCAGCTTCTGCTTCAACTAAGGGAGGAGCTTGCTGCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGATAGGCTGCAGCTaGAGTCTTACACTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPQIGCS*SLTLFC
Trigger: ACAGAAGAGTGTAAGACTCAAGCTGCAGCCTATCTG...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCCTGTAGTCCTGCCTTaGCCCATTCCAGCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPPVVLP*PIPALP
Trigger: TGGCAAGGCTGGAATGGGCAAAGGCAGGACTACAGG...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGATCTCCAGCTGTCCCTTaGCCAGGCCTCCTAGGGCCT +
Preference number: 5 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRSPAVP*PGLLGP
Trigger: AGGCCCTAGGAGGCCTGGCAAAGGGACAGCTGGAGA...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACTGCTGGTTTTCTTCTaGCAGCCGAGCCAGCACCTG +
Preference number: 5 (lower is better)
Translates to: GSRFSGLRSIMSGEALPILLVFF*QPSQHL
Trigger: CAGGTGCTGGCTCGGCTGCAAGAAGAAAACCAGCAG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp TTTAGCTCTTGTGTACTCTCAGCCAGCAGGTCCTTAGGACAACCCTaGTCCATGCCATCCCCTCCAGGCCGGAGACTAGAGCCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: FSSCVLSASRSLGQP*SMPSPPGRRLEPCF
Trigger: AAAGCAAGGCTCTAGTCTCCGGCCTGGAGGGGATGGCATGGAGCAGGGTTGTCCTAAGGACCTGCTGGCTGAGAGTACACAAGAGCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACCGAACCCACCGGACTaGGCTGCGGCTGTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTPNPPD*AAAVQE
Trigger: CTCTTGCACAGCCGCAGCCAAGTCCGGTGGGTTCGG...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCCATTCGAGTCAAGCTaGGTGGGTCGGGCAGATTTC +
Preference number: 5 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPPFESS*VGRADF
Trigger: GAAATCTGCCCGACCCACCAAGCTTGACTCGAATGG...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CAA 90 bp GGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCACAGGCCGATTTGTCATTCTaGTCTGTAACATTAACTCGG +
Preference number: 5 (lower is better)
Translates to: GEALPIPLPSGQHPRPPQADLSF*SVTLTR
Trigger: CCGAGTTAATGTTACAGACAAGAATGACAAATCGGC...CTGTGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCTGCCTCCACAGTGCCTaGTCTTGTGTGTGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPCLHSA*SCVCRA
Trigger: TGCTCTGCACACACAAGACAAGGCACTGTGGAGGCA...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCCCCTGTTCTTCTGGTaGGGACCTTCCATGGACTTC +
Preference number: 5 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPPLFFW*GPSMDF
Trigger: GAAGTCCATGGAAGGTCCCAACCAGAAGAACAGGGG...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
56% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCCCACCAAGTCCTCAGCCTTCTTaGGAGCTAATACTGGATTTA +
Preference number: 5 (lower is better)
Translates to: SGEALPIPLPSGQHPRPPSPQPS*ELILDL
Trigger: TAAATCCAGTATTAGCTCCAAAGAAGGCTGAGGACT...TGGTGGGCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCCATTGGTAGTCAGTaGCTGTCCTGTGGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: GSRFSGLRSIMSGEALPIPIGSQ*LSCGFP
Trigger: AGGAAAGCCACAGGACAGCAACTGACTACCAATGGG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACATTGCCCATTCCAGCCTaGCCAGCACCCGCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTLPIPA*PAPAPV
Trigger: GACTGGAGCGGGTGCTGGCAAGGCTGGAATGGGCAA...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTCCTGTAGTCCTGCCTTaGCCCATTCCAGCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPPVVLP*PIPALP
Trigger: TGGCAAGGCTGGAATGGGCAAAGGCAGGACTACAGG...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAACAGCTTCCCCAGGTCTaGCTCCAGAGCGGCCACTTG +
Preference number: 5 (lower is better)
Translates to: HHSLMKPLSTRVSYSNREQLPQV*LQSGHL
Trigger: CAAGTGGCCGCTCTGGAGCAAGACCTGGGGAAGCTG...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp GGCACAGCCAGAGGAGGCTGCCCAGTGCAATGGACTACGGTTTTCTaGATCCACAGCATCTTCATTAGCACCATGCTGAAGCAGAACCTT +
Preference number: 5 (lower is better)
Translates to: GTARGGCPVQWTTVF*IHSIFISTMLKQNL
Trigger: AAGGTTCTGCTTCAGCATGGTGCTAATGAAGATGCTGTGGATGCAGAAAACCGTAGTCCATTGCACTGGGCAGCCTCCTCTGGCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp CTCCTGCGCCTGCTCTCGAATCTGGTTCTCAAGGTCCAGATAGGCTaGAGCTTGAGTCTTACACTCTTCTGTCTTTTGCACCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LLRLLSNLVLKVQIG*SLSLTLFCLLHQLL
Trigger: CAGGAGCTGGTGCAAAAGACAGAAGAGTGTAAGACTCAAGCTGCAGCCTATCTGGACCTTGAGAACCAGATTCGAGAGCAGGCGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGGTCCAGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACTTCCATCCTCATTCTaGCTGTTGATGTCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: GSRFSGLRSIMSGEALPILPSSF*LLMSAP
Trigger: TGGGGCTGACATCAACAGCAAGAATGAGGATGGAAG...TATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCTGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CAA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCCCTGTTCTTCTGGTaGGGACCTTCCATGGACTTC +
Preference number: 5 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLPLFFW*GPSMDF
Trigger: GAAGTCCATGGAAGGTCCCAACCAGAAGAACAGGGG...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp GGCAGTGCTTCCATCCTCATTCTTGCTGTTGATGTCAGCCCCATTTaGAAGCAGGATAGTCAGACATTCTGTCAGGCCTTTGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: GSASILILAVDVSPI*KQDSQTFCQAFGGC
Trigger: GCAGCCTCCAAAGGCCTGACAGAATGTCTGACTATCCTGCTTGCAAATGGGGCTGACATCAACAGCAAGAATGAGGATGGAAGCACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CAA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTCCACAGTGCCTTGTCTaGTGTGTGCAGAGCATAGTG +
Preference number: 5 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPPQCLV*CVQSIV
Trigger: CACTATGCTCTGCACACACAAGACAAGGCACTGTGG...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GCCCACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGACCACAGTGCCTTGTCTaGTGTGTGCAGAGCATAGTG +
Preference number: 5 (lower is better)
Translates to: AHHSLMKPLSTRVSYSNRPQCLV*CVQSIV
Trigger: CACTATGCTCTGCACACACAAGACAAGGCACTGTGG...TCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCCATTGGTAGTCAGTaGCTGTCCTGTGGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLPIGSQ*LSCGFP
Trigger: AGGAAAGCCACAGGACAGCAACTGACTACCAATGGG...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACAAGGGACTCCGCTGCTTaGCTTTGTGCACTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTRDSAA*LCALLS
Trigger: CGAGAGGAGTGCACAAAGCAAAGCAGCGGAGTCCCT...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp TCAGCCTTCTTTGGAGCTAATACTGGATTTACTGTGGCTGCTGCCTaGTGCTGCTTCTTTAGCTCTTGTGTACTCTCAGCCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SAFFGANTGFTVAAA*CCFFSSCVLSASRS
Trigger: GGACCTGCTGGCTGAGAGTACACAAGAGCTAAAGAAGCAGCAGCAGGCAGCAGCCACAGTAAATCCAGTATTAGCTCCAAAGAAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 90 bp GGGCTGAGTCCTCAGCCTTCTTTGGAGCTAATACTGGATTTACTGTaGCTGCTGCCTGCTGCTGCTTCTTTAGCTCTTGTGTACTCTCAG +
Preference number: 5 (lower is better)
Translates to: GLSPQPSLELILDLL*LLPAAASLALVYSQ
Trigger: CTGAGAGTACACAAGAGCTAAAGAAGCAGCAGCAGGCAGCAGCCACAGTAAATCCAGTATTAGCTCCAAAGAAGGCTGAGGACTCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp ATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCCGCGCCGATTTGTCATTCTaGTCTGTAACATTAACTCGG +
Preference number: 5 (lower is better)
Translates to: IMSGEALPIPLPSGQHPRADLSF*SVTLTR
Trigger: CCGAGTTAATGTTACAGACAAGAATGACAAATCGGC...GCGGGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACCATGGCCAGTTCATTaGTCAGCAGCCCCACACTCT +
Preference number: 5 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTPWPVH*SAAPHS
Trigger: AGAGTGTGGGGCTGCTGACAAATGAACTGGCCATGG...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS TCA 90 bp TGTAACCCCGAGCAGCATTCAGTAGATGATTCCTGTAGGTGGAGATaGTCTCTTCATGGTTCTTCTGGGAATCCTGCAGCTGCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: CNPEQHSVDDSCRWR*SLHGSSGNPAAAGQ
Trigger: TTGCCCTGCAGCTGCAGGATTCCCAGAAGAACCATGAAGAGATCATCTCCACCTACAGGAATCATCTACTGAATGCTGCTCGGGGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp GCCTTCTTTGGAGCTAATACTGGATTTACTGTGGCTGCTGCCTGCTaGTGCTTCTTTAGCTCTTGTGTACTCTCAGCCAGCAGGTCCTTA +
Preference number: 5 (lower is better)
Translates to: AFFGANTGFTVAAAC*CFFSSCVLSASRSL
Trigger: TAAGGACCTGCTGGCTGAGAGTACACAAGAGCTAAAGAAGCAGCAGCAGGCAGCAGCCACAGTAAATCCAGTATTAGCTCCAAAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTCAGATAGGCTGCAGCTaGAGTCTTACACTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: FSGLRSIMSGEALPIPLPQIGCS*SLTLFC
Trigger: ACAGAAGAGTGTAAGACTCAAGCTGCAGCCTATCTG...AGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp TCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGCCTAGTGGCCAACACCCCAGTCCTCAGCCTTCTTaGGAGCTAATACTGGATTTA +
Preference number: 5 (lower is better)
Translates to: SIMSGEALPIPLPSGQHPSPQPS*ELILDL
Trigger: TAAATCCAGTATTAGCTCCAAAGAAGGCTGAGGACT...GGGGTGTTGGCCACTAGGCAATGGTATGGGCAGGGCTTCACCTGACATTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAAAAGGTCTGTGCCCCATaGGTAGTCAGTTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: HHSLMKPLSTRVSYSNREKVCAP*VVSCCP
Trigger: AGGACAGCAACTGACTACCAATGGGGCACAGACCTT...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAATTGATCTTGGCTTCCTaGTCTCGGCAAGCCCCAATG +
Preference number: 5 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRELILAS*SRQAPM
Trigger: CATTGGGGCTTGCCGAGACAAGGAAGCCAAGATCAA...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 90 bp TTCTTTGGAGCTAATACTGGATTTACTGTGGCTGCTGCCTGCTGCTaGTTCTTTAGCTCTTGTGTACTCTCAGCCAGCAGGTCCTTAGGA +
Preference number: 5 (lower is better)
Translates to: FFGANTGFTVAAACC*FFSSCVLSASRSLG
Trigger: TCCTAAGGACCTGCTGGCTGAGAGTACACAAGAGCTAAAGAAGCAGCAGCAGGCAGCAGCCACAGTAAATCCAGTATTAGCTCCAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTTCCTCATTCTTGCTGTaGATGTCAGCCCCATTTGCA +
Preference number: 5 (lower is better)
Translates to: GFLIPTENLVSLRAHSEASSFLL*MSAPFA
Trigger: TGCAAATGGGGCTGACATCAACAGCAAGAATGAGGA...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS-3UTR CAA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTAACAACTCCTTGATCTaGGCTTCCTTGTCTCGGCAA +
Preference number: 5 (lower is better)
Translates to: GFLIPTENLVSLRAHSEANNSLI*ASLSRQ
Trigger: TTGCCGAGACAAGGAAGCCAAGATCAAGGAGTTGTT...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp AGGTTCTCAGGTCTGAGGTCCATAATGTCAGGTGAAGCCCTGCCCATACCATTGAGGATCAAAGCCGATTaGTCATTCTTGTCTGTAACA +
Preference number: 5 (lower is better)
Translates to: RFSGLRSIMSGEALPIPLRIKAD*SFLSVT
Trigger: TGTTACAGACAAGAATGACAAATCGGCTTTGATCCT...CAATGGTATGGGCAGGGCTTCACCTGACATTATGGACCTCAGACCTGAGAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp GGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACAGTGAGGCTTTCTTCAACAACTCCTaGATCTTGGCTTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: GFLIPTENLVSLRAHSEAFFNNS*ILASLS
Trigger: AGACAAGGAAGCCAAGATCAAGGAGTTGTTGAAGAA...AGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAATTCTTCAACAACTCCTaGATCTTGGCTTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: HHSLMKPLSTRVSYSNREFFNNS*ILASLS
Trigger: AGACAAGGAAGCCAAGATCAAGGAGTTGTTGAAGAA...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp CTGTCAACCAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTGAGGGCACACATTTTCTCCCCGAATaGCTAGAACCTCTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: LSTRVSYSNRESRIPEGTHFLPE*LEPLLK
Trigger: TTTCAGAAGAGGTTCTAGCAATTCGGGGAGAAAATG...TGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTGGTTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS-3UTR CAA 90 bp CACCACAGCCTGATGAAGCCTCTGTCAACCAGGGTTTCTTATTCCAACAGAGAAAGGATCAAAGCCGATTaGTCATTCTTGTCTGTAACA +
Preference number: 5 (lower is better)
Translates to: HHSLMKPLSTRVSYSNRERIKAD*SFLSVT
Trigger: TGTTACAGACAAGAATGACAAATCGGCTTTGATCCT...TTCTCTGTTGGAATAAGAAACCCTGGTTGACAGAGGCTTCATCAGGCTGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp CCCCCGCATCTCGCTGGCCTGGCGCTCTTGTTCGGCTaGCTGAGCGGCCAGGTCCCCGCTCCGGCGGCGCTC +
Preference number: 6 (lower is better)
Translates to: PPHLAGLALLFG*LSGQVPAPAAL
Trigger: GAGCGCCGCCGGAGCGGGGACCTGGCCGCTCAGGCAGCCGAACAAGAGCGCCAGGCCAGCGAGATGCGGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 72 bp CTCGGAGCGCCCCCGCATCTCGCTGGCCTGGCGCTCTaGTTCGGCTGCCTGAGCGGCCAGGTCCCCGCTCCG +
Preference number: 6 (lower is better)
Translates to: LGAPPHLAGLAL*FGCLSGQVPAP
Trigger: CGGAGCGGGGACCTGGCCGCTCAGGCAGCCGAACAAGAGCGCCAGGCCAGCGAGATGCGGGGGCGCTCCGAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 90 bp CTCAAACTGCTCGGAGCGCCCCCGCATCTCGCTGGCCTGGCGCTCTaGTTCGGCTGCCTGAGCGGCCAGGTCCCCGCTCCGGCGGCGCTC +
Preference number: 6 (lower is better)
Translates to: LKLLGAPPHLAGLAL*FGCLSGQVPAPAAL
Trigger: GAGCGCCGCCGGAGCGGGGACCTGGCCGCTCAGGCAGCCGAACAAGAGCGCCAGGCCAGCGAGATGCGGGGGCGCTCCGAGCAGTTTGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp CTCCAGTCGGGCTTCCATCTTCTCCCAGGCAGCTGCTaGTGCCTCAGCACGGGGAGTCCCCAGGGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: LQSGFHLLPGSC*CLSTGSPQGSL
Trigger: GAGGGAGCCCTGGGGACTCCCCGTGCTGAGGCAGCAGCAGCTGCCTGGGAGAAGATGGAAGCCCGACTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp TGGACCTGCGCCTGTGGCTTGGGCACAAACTCCCGCTaGAGCCGCTGGCTCAGGGACTGTAGCTCCCTCTGC +
Preference number: 6 (lower is better)
Translates to: WTCACGLGTNSR*SRWLRDCSSLC
Trigger: GCAGAGGGAGCTACAGTCCCTGAGCCAGCGGCTGCAGCGGGAGTTTGTGCCCAAGCCACAGGCGCAGGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp GCCTGGGCCACCAGCGAACCCCGAGTTTTCTCGTGTTaGCGTAGGCTGGCTGCCTCCCGGGCCCTTAGCTCA +
Preference number: 6 (lower is better)
Translates to: AWATSEPRVFSC*RRLAASRALSS
Trigger: TGAGCTAAGGGCCCGGGAGGCAGCCAGCCTACGGCAACACGAGAAAACTCGGGGTTCGCTGGTGGCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 90 bp AGGGTGCTGATGCAGGCCCGCAGCTCCTCCAGGGACTCCGCTGCTTaGCTTTGTGCACTCCTCTCGCCCACTAGGTCTGCGGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RVLMQARSSSRDSAA*LCALLSPTRSAGRQ
Trigger: CTGCCTGCCCGCAGACCTAGTGGGCGAGAGGAGTGCACAAAGCAAAGCAGCGGAGTCCCTGGAGGAGCTGCGGGCCTGCATCAGCACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp TGCAGGCCCGCAGCTCCTCCAGGGACTCCGCTGCTTTaGTTTGTGCACTCCTCTCGCCCACTAGGTCTGCGG +
Preference number: 6 (lower is better)
Translates to: CRPAAPPGTPLL*FVHSSRPLGLR
Trigger: CCGCAGACCTAGTGGGCGAGAGGAGTGCACAAAGCAAAGCAGCGGAGTCCCTGGAGGAGCTGCGGGCCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp GCCTGTGGCTTGGGCACAAACTCCCGCTGCAGCCGCTaGCTCAGGGACTGTAGCTCCCTCTGCAACCTCTGC +
Preference number: 6 (lower is better)
Translates to: ACGLGTNSRCSR*LRDCSSLCNLC
Trigger: GCAGAGGTTGCAGAGGGAGCTACAGTCCCTGAGCCAGCGGCTGCAGCGGGAGTTTGTGCCCAAGCCACAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp TTTTCTCAAACTGCTCGGAGCGCCCCCGCATCTCGCTaGCCTGGCGCTCTTGTTCGGCTGCCTGAGCGGCCA +
Preference number: 6 (lower is better)
Translates to: FSQTARSAPASR*PGALVRLPERP
Trigger: TGGCCGCTCAGGCAGCCGAACAAGAGCGCCAGGCCAGCGAGATGCGGGGGCGCTCCGAGCAGTTTGAGAAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 72 bp TGTCGCAACTGCTGTAGCTGGACCTGCGCCTGTGGCTaGGGCACAAACTCCCGCTGCAGCCGCTGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: CRNCCSWTCACG*GTNSRCSRWLR
Trigger: CCTGAGCCAGCGGCTGCAGCGGGAGTTTGTGCCCAAGCCACAGGCGCAGGTCCAGCTACAGCAGTTGCGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp GCGCCTCGCTGCAGCAGCTGTGAGCAGATAGCTGCGTaGCCACCCAGCGATGCGATCATCAGGGGTGTACGT +
Preference number: 6 (lower is better)
Translates to: APRCSSCEQIAA*PPSDAIIRGVR
Trigger: ACGTACACCCCTGATGATCGCATCGCTGGGTGGGCACGCAGCTATCTGCTCACAGCTGCTGCAGCGAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp GTCAGCAGCCCCACACTCTGTCGCAACTGCTGTAGCTaGACCTGCGCCTGTGGCTTGGGCACAAACTCCCGC +
Preference number: 6 (lower is better)
Translates to: VSSPTLCRNCCS*TCACGLGTNSR
Trigger: GCGGGAGTTTGTGCCCAAGCCACAGGCGCAGGTCCAGCTACAGCAGTTGCGACAGAGTGTGGGGCTGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp TGCTGGTTTTCTTCTTGCAGCCGAGCCAGCACCTGCTaGGCCTCCCGGTGCCGATCCACCAGGGTGCTGATG +
Preference number: 6 (lower is better)
Translates to: CWFSSCSRASTC*ASRCRSTRVLM
Trigger: CATCAGCACCCTGGTGGATCGGCACCGGGAGGCCCAGCAGGTGCTGGCTCGGCTGCAAGAAGAAAACCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp CCAGCGAACCCCGAGTTTTCTCGTGTTGCCGTAGGCTaGCTGCCTCCCGGGCCCTTAGCTCAGCCACTTCCT +
Preference number: 6 (lower is better)
Translates to: PANPEFSRVAVG*LPPGPLAQPLP
Trigger: AGGAAGTGGCTGAGCTAAGGGCCCGGGAGGCAGCCAGCCTACGGCAACACGAGAAAACTCGGGGTTCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 72 bp ATGCAGGCCCGCAGCTCCTCCAGGGACTCCGCTGCTTaGCTTTGTGCACTCCTCTCGCCCACTAGGTCTGCG +
Preference number: 6 (lower is better)
Translates to: MQARSSSRDSAA*LCALLSPTRSA
Trigger: CGCAGACCTAGTGGGCGAGAGGAGTGCACAAAGCAAAGCAGCGGAGTCCCTGGAGGAGCTGCGGGCCTGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp GAGAGCCGGGCCACAGGTTCCCGAACCCACCGGACTTaGCTGCGGCTGTGCAAGAGACAGCTGTCAAAAAGC +
Preference number: 6 (lower is better)
Translates to: ESRATGSRTHRT*LRLCKRQLSKS
Trigger: GCTTTTTGACAGCTGTCTCTTGCACAGCCGCAGCCAAGTCCGGTGGGTTCGGGAACCTGTGGCCCGGCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp TCCATGCCATCCCCTCCAGGCCGGAGACTAGAGCCTTaGTTTCCTGAAGCTCTGGGCTCCCAGGATAGGAGG +
Preference number: 6 (lower is better)
Translates to: SMPSPPGRRLEP*FPEALGSQDRR
Trigger: CCTCCTATCCTGGGAGCCCAGAGCTTCAGGAAAGCAAGGCTCTAGTCTCCGGCCTGGAGGGGATGGCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp ATCTTCTCTTTCAGCAGCTCTGCCGTTTTCTCAAACTaGTCGGAGCGCCCCCGCATCTCGCTGGCCTGGCGC +
Preference number: 6 (lower is better)
Translates to: IFSFSSSAVFSN*SERPRISLAWR
Trigger: GCGCCAGGCCAGCGAGATGCGGGGGCGCTCCGAGCAGTTTGAGAAAACGGCAGAGCTGCTGAAAGAGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp GATGAAACGGGGACTGGCCATTCGAGTCAAGCTTGGTaGGTCGGGCAGATTTCCTGGAGGCCAGGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: DETGTGHSSQAW*VGQISWRPGQP
Trigger: TGGCTGCCCTGGCCTCCAGGAAATCTGCCCGACCCACCAAGCTTGACTCGAATGGCCAGTCCCCGTTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS CCA 72 bp CCAGATGAAACGGGGACTGGCCATTCGAGTCAAGCTTaGTGGGTCGGGCAGATTTCCTGGAGGCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: PDETGTGHSSQA*WVGQISWRPGQ
Trigger: CTGCCCTGGCCTCCAGGAAATCTGCCCGACCCACCAAGCTTGACTCGAATGGCCAGTCCCCGTTTCATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS CCA 72 bp CCTGGGGCTGCCTTTAGGGCTCCCTCTCTGGACTCCTaGGAAGGAACCTCAGGTTTCACCTGTAGTCCTGCC +
Preference number: 6 (lower is better)
Translates to: PGAAFRAPSLDS*EGTSGFTCSPA
Trigger: GGCAGGACTACAGGTGAAACCTGAGGTTCCTTCCCAGGAGTCCAGAGAGGGAGCCCTAAAGGCAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 72 bp AGAGAGCCGGGCCACAGGTTCCCGAACCCACCGGACTaGGCTGCGGCTGTGCAAGAGACAGCTGTCAAAAAG +
Preference number: 6 (lower is better)
Translates to: REPGHRFPNPPD*AAAVQETAVKK
Trigger: CTTTTTGACAGCTGTCTCTTGCACAGCCGCAGCCAAGTCCGGTGGGTTCGGGAACCTGTGGCCCGGCTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 90 bp CCAACACGTCCAGGAAGGCTTCGTGGTCACACAGCAGGAGCACACTaGAGGCACAGCCAGAGGAGGCTGCCCAGTGCAATGGACTACGGT +
Preference number: 6 (lower is better)
Translates to: PTRPGRLRGHTAGAH*RHSQRRLPSAMDYG
Trigger: ACCGTAGTCCATTGCACTGGGCAGCCTCCTCTGGCTGTGCCTCAAGTGTGCTCCTGCTGTGTGACCACGAAGCCTTCCTGGACGTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 90 bp TGGACTCCTGGGAAGGAACCTCAGGTTTCACCTGTAGTCCTGCCTTaGCCCATTCCAGCCTTGCCAGCACCCGCTCCAGTCGGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: WTPGKEPQVSPVVLP*PIPALPAPAPVGLP
Trigger: TGGAAGCCCGACTGGAGCGGGTGCTGGCAAGGCTGGAATGGGCAAAGGCAGGACTACAGGTGAAACCTGAGGTTCCTTCCCAGGAGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS TCA 72 bp TGTAACATTAACTCGGGCGCCTCGCTGCAGCAGCTGTaGGCAGATAGCTGCGTGCCCACCCAGCGATGCGAT +
Preference number: 6 (lower is better)
Translates to: CNINSGASLQQL*ADSCVPTQRCD
Trigger: ATCGCATCGCTGGGTGGGCACGCAGCTATCTGCTCACAGCTGCTGCAGCGAGGCGCCCGAGTTAATGTTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp TGTGTACTCTCAGCCAGCAGGTCCTTAGGACAACCCTaGTCCATGCCATCCCCTCCAGGCCGGAGACTAGAG +
Preference number: 6 (lower is better)
Translates to: CVLSASRSLGQP*SMPSPPGRRLE
Trigger: CTCTAGTCTCCGGCCTGGAGGGGATGGCATGGAGCAGGGTTGTCCTAAGGACCTGCTGGCTGAGAGTACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 72 bp GGGAAGGAACCTCAGGTTTCACCTGTAGTCCTGCCTTaGCCCATTCCAGCCTTGCCAGCACCCGCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: GKEPQVSPVVLP*PIPALPAPAPV
Trigger: GACTGGAGCGGGTGCTGGCAAGGCTGGAATGGGCAAAGGCAGGACTACAGGTGAAACCTGAGGTTCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 90 bp GCTTCCGCAGCTTCTCTGTGGCCTCCTTCTCCATGGCCAGTTCATTaGTCAGCAGCCCCACACTCTGTCGCAACTGCTGTAGCTGGACCT +
Preference number: 6 (lower is better)
Translates to: ASAASLWPPSPWPVH*SAAPHSVATAVAGP
Trigger: AGGTCCAGCTACAGCAGTTGCGACAGAGTGTGGGGCTGCTGACAAATGAACTGGCCATGGAGAAGGAGGCCACAGAGAAGCTGCGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp CTCCGTGGCTCAGGAGCAGTTCAGCCACCTCGGCACTaGCTTTCTCACAGGCCAGGATCAAAGCCGATTTGT +
Preference number: 6 (lower is better)
Translates to: LRGSGAVQPPRH*LSHRPGSKPIC
Trigger: ACAAATCGGCTTTGATCCTGGCCTGTGAGAAAGGCAGTGCCGAGGTGGCTGAACTGCTCCTGAGCCACGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp GGTTCATGGCTGCTGGGCCCACTGGTTCAGCCACTGTaGCTCCTGGTTCAACTCCTAGAACCTGGGAACTCT +
Preference number: 6 (lower is better)
Translates to: GSWLLGPLVQPL*LLVQLLEPGNS
Trigger: AGAGTTCCCAGGTTCTAGGAGTTGAACCAGGAGGCACAGTGGCTGAACCAGTGGGCCCAGCAGCCATGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp AGTTCATTTGTCAGCAGCCCCACACTCTGTCGCAACTaGTGTAGCTGGACCTGCGCCTGTGGCTTGGGCACA +
Preference number: 6 (lower is better)
Translates to: SSFVSSPTLCRN*CSWTCACGLGT
Trigger: TGTGCCCAAGCCACAGGCGCAGGTCCAGCTACAGCAGTTGCGACAGAGTGTGGGGCTGCTGACAAATGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp CAAGCTCCTCCCTTAGTTGAAGCAGAAGCTGGTTCATaGCTGCTGGGCCCACTGGTTCAGCCACTGTGCCTC +
Preference number: 6 (lower is better)
Translates to: QAPPLVEAEAGS*LLGPLVQPLCL
Trigger: GAGGCACAGTGGCTGAACCAGTGGGCCCAGCAGCCATGAACCAGCTTCTGCTTCAACTAAGGGAGGAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp TCATTCTTGTCTGTAACATTAACTCGGGCGCCTCGCTaGAGCAGCTGTGAGCAGATAGCTGCGTGCCCACCC +
Preference number: 6 (lower is better)
Translates to: SFLSVTLTRAPR*SSCEQIAACPP
Trigger: GGGTGGGCACGCAGCTATCTGCTCACAGCTGCTGCAGCGAGGCGCCCGAGTTAATGTTACAGACAAGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp GACGCTGGGCTCTGGGGTGGCCCCTGTTCTTCTGGTTaGGACCTTCCATGGACTTCATACTGGATCTTTCCT +
Preference number: 6 (lower is better)
Translates to: DAGLWGGPCSSG*DLPWTSYWIFP
Trigger: AGGAAAGATCCAGTATGAAGTCCATGGAAGGTCCCAACCAGAAGAACAGGGGCCACCCCAGAGCCCAGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp CTCAGACGCTGGGCTCTGGGGTGGCCCCTGTTCTTCTaGTTGGGACCTTCCATGGACTTCATACTGGATCTT +
Preference number: 6 (lower is better)
Translates to: LRRWALGWPLFF*LGPSMDFILDL
Trigger: AAGATCCAGTATGAAGTCCATGGAAGGTCCCAACCAGAAGAACAGGGGCCACCCCAGAGCCCAGCGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 72 bp AGACGCTGGGCTCTGGGGTGGCCCCTGTTCTTCTGGTaGGGACCTTCCATGGACTTCATACTGGATCTTTCC +
Preference number: 6 (lower is better)
Translates to: RRWALGWPLFFW*GPSMDFILDLS
Trigger: GGAAAGATCCAGTATGAAGTCCATGGAAGGTCCCAACCAGAAGAACAGGGGCCACCCCAGAGCCCAGCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS TCA 72 bp TTTTCTCGCCACACTGCAGCAAGCTCCTCCCTTAGTTaGAGCAGAAGCTGGTTCATGGCTGCTGGGCCCACT +
Preference number: 6 (lower is better)
Translates to: FSRHTAASSSLS*SRSWFMAAGPT
Trigger: AGTGGGCCCAGCAGCCATGAACCAGCTTCTGCTTCAACTAAGGGAGGAGCTTGCTGCAGTGTGGCGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp TCAGGGCCAAAGGTCTGTGCCCCATTGGTAGTCAGTTaGTGTCCTGTGGCTTTCCTGATGGTCTCAGACGCT +
Preference number: 6 (lower is better)
Translates to: SGPKVCAPLVVS*CPVAFLMVSDA
Trigger: AGCGTCTGAGACCATCAGGAAAGCCACAGGACAGCAACTGACTACCAATGGGGCACAGACCTTTGGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp AGGCAGCTGGTCAGCATGATCAGGGCCAAAGGTCTGTaGCCCATTGGTAGTCAGTTGCTGTCCTGTGGCTTT +
Preference number: 6 (lower is better)
Translates to: RQLVSMIRAKGL*PIGSQLLSCGF
Trigger: AAAGCCACAGGACAGCAACTGACTACCAATGGGGCACAGACCTTTGGCCCTGATCATGCTGACCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp CGTCCATCATTATCCAACACGTCCAGGAAGGCTTCGTaGTCACACAGCAGGAGCACACTTGAGGCACAGCCA +
Preference number: 6 (lower is better)
Translates to: RPSLSNTSRKAS*SHSRSTLEAQP
Trigger: TGGCTGTGCCTCAAGTGTGCTCCTGCTGTGTGACCACGAAGCCTTCCTGGACGTGTTGGATAATGATGGACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 72 bp ATCAGGGCCAAAGGTCTGTGCCCCATTGGTAGTCAGTaGCTGTCCTGTGGCTTTCCTGATGGTCTCAGACGC +
Preference number: 6 (lower is better)
Translates to: IRAKGLCPIGSQ*LSCGFPDGLRR
Trigger: GCGTCTGAGACCATCAGGAAAGCCACAGGACAGCAACTGACTACCAATGGGGCACAGACCTTTGGCCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 72 bp GCTTCTCTGTGGCCTCCTTCTCCATGGCCAGTTCATTaGTCAGCAGCCCCACACTCTGTCGCAACTGCTGTA +
Preference number: 6 (lower is better)
Translates to: ASLWPPSPWPVH*SAAPHSVATAV
Trigger: TACAGCAGTTGCGACAGAGTGTGGGGCTGCTGACAAATGAACTGGCCATGGAGAAGGAGGCCACAGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS TCA 72 bp CAGGGTTTCTTATTCCAACAGAGAATCTCGTATCCCTaGGGGCACACAGTGAGGCTGCCTCACTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: QGFLFQQRISYP*GHTVRLPHSSS
Trigger: GGAAGAGGAGTGAGGCAGCCTCACTGTGTGCCCTCAGGGATACGAGATTCTCTGTTGGAATAAGAAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 90 bp GGACTTCATACTGGATCTTTCCTGGGGCTGAGTCCTCAGCCTTCTTaGGAGCTAATACTGGATTTACTGTGGCTGCTGCCTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: GLHTGSFLGLSPQPS*ELILDLLWLLPAAA
Trigger: AGCAGCAGCAGGCAGCAGCCACAGTAAATCCAGTATTAGCTCCAAAGAAGGCTGAGGACTCAGCCCCAGGAAAGATCCAGTATGAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 90 bp GGGAATCCTGCAGCTGCAGGGCAAGGCGAGCATTTTCTCCCCGAATaGCTAGAACCTCTTCTGAAAGCTGCTCCAGCTTCTTCAACAACT +
Preference number: 6 (lower is better)
Translates to: GNPAAAGQGEHFLPE*LEPLLKAAPASSTT
Trigger: AGTTGTTGAAGAAGCTGGAGCAGCTTTCAGAAGAGGTTCTAGCAATTCGGGGAGAAAATGCTCGCCTTGCCCTGCAGCTGCAGGATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 90 bp AGGGCACACAGTGAGGCTGCCTCACTCCTCTTCCATGCTAAGGATTaGCAGCAGGATATTGTACACTTCATGTTCCATGTAACCCCGAGC +
Preference number: 6 (lower is better)
Translates to: RAHSEAASLLFHAKD*QQDIVHFMFHVTPS
Trigger: GCTCGGGGTTACATGGAACATGAAGTGTACAATATCCTGCTGCAAATCCTTAGCATGGAAGAGGAGTGAGGCAGCCTCACTGTGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp AGAGGAGGCTGCCCAGTGCAATGGACTACGGTTTTCTaGATCCACAGCATCTTCATTAGCACCATGCTGAAG +
Preference number: 6 (lower is better)
Translates to: RGGCPVQWTTVF*IHSIFISTMLK
Trigger: CTTCAGCATGGTGCTAATGAAGATGCTGTGGATGCAGAAAACCGTAGTCCATTGCACTGGGCAGCCTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp GCTAATACTGGATTTACTGTGGCTGCTGCCTGCTGCTaGTTCTTTAGCTCTTGTGTACTCTCAGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: ANTGFTVAAACC*FFSSCVLSASR
Trigger: CCTGCTGGCTGAGAGTACACAAGAGCTAAAGAAGCAGCAGCAGGCAGCAGCCACAGTAAATCCAGTATTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CCA 72 bp CCTCAGCCTTCTTTGGAGCTAATACTGGATTTACTGTaGCTGCTGCCTGCTGCTGCTTCTTTAGCTCTTGTG +
Preference number: 6 (lower is better)
Translates to: PQPSLELILDLL*LLPAAASLALV
Trigger: CACAAGAGCTAAAGAAGCAGCAGCAGGCAGCAGCCACAGTAAATCCAGTATTAGCTCCAAAGAAGGCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp TTTGGAGCTAATACTGGATTTACTGTGGCTGCTGCCTaGTGCTGCTTCTTTAGCTCTTGTGTACTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: FGANTGFTVAAA*CCFFSSCVLSA
Trigger: GGCTGAGAGTACACAAGAGCTAAAGAAGCAGCAGCAGGCAGCAGCCACAGTAAATCCAGTATTAGCTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 72 bp AAGTGTAGGGCAGTGCTTCCATCCTCATTCTTGCTGTaGATGTCAGCCCCATTTGCAAGCAGGATAGTCAGA +
Preference number: 6 (lower is better)
Translates to: KCRAVLPSSFLL*MSAPFASRIVR
Trigger: TCTGACTATCCTGCTTGCAAATGGGGCTGACATCAACAGCAAGAATGAGGATGGAAGCACTGCCCTACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS TCA 72 bp GAGCAGCATTCAGTAGATGATTCCTGTAGGTGGAGATaGTCTCTTCATGGTTCTTCTGGGAATCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: EQHSVDDSCRWR*SLHGSSGNPAA
Trigger: AGCTGCAGGATTCCCAGAAGAACCATGAAGAGATCATCTCCACCTACAGGAATCATCTACTGAATGCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS GCA 72 bp TCCATCCTCATTCTTGCTGTTGATGTCAGCCCCATTTaGAAGCAGGATAGTCAGACATTCTGTCAGGCCTTT +
Preference number: 6 (lower is better)
Translates to: SILILAVDVSPI*KQDSQTFCQAF
Trigger: AAAGGCCTGACAGAATGTCTGACTATCCTGCTTGCAAATGGGGCTGACATCAACAGCAAGAATGAGGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355594.9
CDS GCA 72 bp TTTTCTCCCCGAATTGCTAGAACCTCTTCTGAAAGCTaGTCCAGCTTCTTCAACAACTCCTTGATCTTGGCT +
Preference number: 6 (lower is better)
Translates to: FSPRIARTSSES*SSFFNNSLILA
Trigger: AGCCAAGATCAAGGAGTTGTTGAAGAAGCTGGAGCAGCTTTCAGAAGAGGTTCTAGCAATTCGGGGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2
CDS CAA 72 bp AGTGAGGCTGCCTCACTCCTCTTCCATGCTAAGGATTaGCAGCAGGATATTGTACACTTCATGTTCCATGTA +
Preference number: 6 (lower is better)
Translates to: SEAASLLFHAKD*QQDIVHFMFHV
Trigger: TACATGGAACATGAAGTGTACAATATCCTGCTGCAAATCCTTAGCATGGAAGAGGAGTGAGGCAGCCTCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355594.9
ENST00000544626.2