RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD33B (Homo sapiens)

Ensembl gene IDs: ENSG00000164236

Ensembl transcript IDs: ENST00000296657.7, ENST00000504806.5

Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCTGGAAATGCGCGCAGCCCCGTGGTCCATGGAGCGGAAGTGGTaGGATGCGCAACGGGGCCGCCTCCTTCTCCGCGCCCAGCCCTGC +
Preference number: 1 (lower is better)
Translates to: SLEMRAAPWSMERKW*DAQRGRLLLRAQPC
Trigger: GCAGGGCTGGGCGCGGAGAAGGAGGCGGCCCCGTTGCGCATCGCACCACTTCCGCTCCATGGACCACGGGGCTGCGCGCATTTCCAGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 90 bp AACAGCCTGGAAATGCGCGCAGCCCCGTGGTCCATGGAGCGGAAGTaGTGCGATGCGCAACGGGGCCGCCTCCTTCTCCGCGCCCAGCCC +
Preference number: 1 (lower is better)
Translates to: NSLEMRAAPWSMERK*CDAQRGRLLLRAQP
Trigger: GGGCTGGGCGCGGAGAAGGAGGCGGCCCCGTTGCGCATCGCACCACTTCCGCTCCATGGACCACGGGGCTGCGCGCATTTCCAGGCTGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 90 bp CAGCCTGGACAAACAGCCTGGAAATGCGCGCAGCCCCGTGGTCCATaGAGCGGAAGTGGTGCGATGCGCAACGGGGCCGCCTCCTTCTCC +
Preference number: 1 (lower is better)
Translates to: QPGQTAWKCAQPRGP*SGSGAMRNGAASFS
Trigger: GGAGAAGGAGGCGGCCCCGTTGCGCATCGCACCACTTCCGCTCCATGGACCACGGGGCTGCGCGCATTTCCAGGCTGTTTGTCCAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 90 bp TTGGAAGCAGCCTGGACAAACAGCCTGGAAATGCGCGCAGCCCCGTaGTCCATGGAGCGGAAGTGGTGCGATGCGCAACGGGGCCGCCTC +
Preference number: 1 (lower is better)
Translates to: LEAAWTNSLEMRAAP*SMERKWCDAQRGRL
Trigger: GAGGCGGCCCCGTTGCGCATCGCACCACTTCCGCTCCATGGACCACGGGGCTGCGCGCATTTCCAGGCTGTTTGTCCAGGCTGCTTCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 90 bp CCCTCAGCCCTCTCTTGGAAGCAGCCTGGACAAACAGCCTGGAAATaGGCGCAGCCCCGTGGTCCATGGAGCGGAAGTGGTGCGATGCGC +
Preference number: 1 (lower is better)
Translates to: PSALSWKQPGQTAWK*AQPRGPWSGSGAMR
Trigger: GCGCATCGCACCACTTCCGCTCCATGGACCACGGGGCTGCGCGCATTTCCAGGCTGTTTGTCCAGGCTGCTTCCAAGAGAGGGCTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 90 bp GTGGCTCCCTCAGCCCTCTCTTGGAAGCAGCCTGGACAAACAGCCTaGAAATGCGCGCAGCCCCGTGGTCCATGGAGCGGAAGTGGTGCG +
Preference number: 1 (lower is better)
Translates to: VAPSALSWKQPGQTA*KCAQPRGPWSGSGA
Trigger: CGCACCACTTCCGCTCCATGGACCACGGGGCTGCGCGCATTTCCAGGCTGTTTGTCCAGGCTGCTTCCAAGAGAGGGCTGAGGGAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 90 bp AACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGGTaGAGAATCCACACAGTTACCCACCGTGGGAGGTGGAGGGACCTG +
Preference number: 1 (lower is better)
Translates to: NRAPRCFQRGAPIAR*RIHTVTHRGRWRDL
Trigger: CAGGTCCCTCCACCTCCCACGGTGGGTAACTGTGTGGATTCTGCACCTGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 90 bp GGCCAGTTTAAGATCCCTGGTTGCTCGATGCCTGCTGGTGCCAAGTaGAAGGGAGTATGGAGAAGCCTGCACCAGCCCTGCCTGCATCCT +
Preference number: 1 (lower is better)
Translates to: GQFKIPGCSMPAGAK*KGVWRSLHQPCLHP
Trigger: AGGATGCAGGCAGGGCTGGTGCAGGCTTCTCCATACTCCCTTCCACTTGGCACCAGCAGGCATCGAGCAACCAGGGATCTTAAACTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 90 bp GCTCGATGCCTGCTGGTGCCAAGTGGAAGGGAGTATGGAGAAGCCTaGACCAGCCCTGCCTGCATCCTGAGACAGACACCATGTATCATG +
Preference number: 1 (lower is better)
Translates to: ARCLLVPSGREYGEA*TSPACILRQTPCIM
Trigger: CATGATACATGGTGTCTGTCTCAGGATGCAGGCAGGGCTGGTGCAGGCTTCTCCATACTCCCTTCCACTTGGCACCAGCAGGCATCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 90 bp GCTGGTGCCAAGTGGAAGGGAGTATGGAGAAGCCTGCACCAGCCCTaGCTGCATCCTGAGACAGACACCATGTATCATGATGTATCTAGG +
Preference number: 1 (lower is better)
Translates to: AGAKWKGVWRSLHQP*LHPETDTMYHDVSR
Trigger: CCTAGATACATCATGATACATGGTGTCTGTCTCAGGATGCAGGCAGGGCTGGTGCAGGCTTCTCCATACTCCCTTCCACTTGGCACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 90 bp GTGCCAAGTGGAAGGGAGTATGGAGAAGCCTGCACCAGCCCTGCCTaGATCCTGAGACAGACACCATGTATCATGATGTATCTAGGGTTA +
Preference number: 1 (lower is better)
Translates to: VPSGREYGEACTSPA*ILRQTPCIMMYLGL
Trigger: TAACCCTAGATACATCATGATACATGGTGTCTGTCTCAGGATGCAGGCAGGGCTGGTGCAGGCTTCTCCATACTCCCTTCCACTTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 90 bp TCCCAACTCCTTGGCCACGAGGGTGACCCACAGTCAACTAATATCTaGAGTTCTCAAAGAGGGTCCAGTCTCCTGTGGCATTCATCATGG +
Preference number: 1 (lower is better)
Translates to: SQLLGHEGDPQSTNI*SSQRGSSLLWHSSW
Trigger: CCATGATGAATGCCACAGGAGACTGGACCCTCTTTGAGAACTGCAGATATTAGTTGACTGTGGGTCACCCTCGTGGCCAAGGAGTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 90 bp CACCAATCTCCCATTAGCCTGGGTGCAGCCTGCAGTCCTGTTCAATaGAGTATTTGGAGAGGCCAGTTTAAGATCCCTGGTTGCTCGATG +
Preference number: 1 (lower is better)
Translates to: HQSPISLGAACSPVQ*SIWRGQFKIPGCSM
Trigger: CATCGAGCAACCAGGGATCTTAAACTGGCCTCTCCAAATACTCCATTGAACAGGACTGCAGGCTGCACCCAGGCTAATGGGAGATTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR TCA 90 bp ACAACCCACATGGCCAGAGAGCCATTAGAACTAGAAACTCCAGCCTaGGTTTCCAGCTTTCATACCCTGCCCTGCCGAATTAGAATGCTG +
Preference number: 1 (lower is better)
Translates to: TTHMAREPLELETPA*VSSFHTLPCRIRML
Trigger: CAGCATTCTAATTCGGCAGGGCAGGGTATGAAAGCTGGAAACTCAGGCTGGAGTTTCTAGTTCTAATGGCTCTCTGGCCATGTGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 90 bp ATCTGCAGTTCTCAAAGAGGGTCCAGTCTCCTGTGGCATTCATCATaGTGCCCTTCTGGGATTAAGGAGGAACTCACTGCAATCTCATCT +
Preference number: 1 (lower is better)
Translates to: ICSSQRGSSLLWHSS*CPSGIKEELTAISS
Trigger: AGATGAGATTGCAGTGAGTTCCTCCTTAATCCCAGAAGGGCACCATGATGAATGCCACAGGAGACTGGACCCTCTTTGAGAACTGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGCGGAAGTGGTGCGATaGGCAACGGGGCCGCCTCCT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPAEVVR*ATGPPP
Trigger: AGGAGGCGGCCCCGTTGCGCATCGCACCACTTCCGC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGCTGCAGGAGCTGCCTaGACCCGCCGCATGGGCCAA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPAAGAA*TRRMGQ
Trigger: TTGGCCCATGCGGCGGGTCCAGGCAGCTCCTGCAGC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGCCCTGTCCACATCCTaGGACCGAGGGGCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPALSTS*DRGACV
Trigger: GACACAGGCCCCTCGGTCTCAGGATGTGGACAGGGC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCTCGTCTCCGCTCCTaGGACCTGGTCACCGCCAAC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPRLRS*DLVTAN
Trigger: GTTGGCGGTGACCAGGTCTCAGGAGCGGAGACGAGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAATGGAGCGGAAGTGGTaGGATGCGCAACGGGGCCGC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPMERKW*DAQRGR
Trigger: GCGGCCCCGTTGCGCATCGCACCACTTCCGCTCCAT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGGGAGCGGCCGGTTCTaGAGGGAAGAGCGAGGACTG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPGSGRF*REERGL
Trigger: CAGTCCTCGCTCTTCCCTCCAGAACCGGCCGCTCCC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAGGGGTAGCCGGTGTTaGGAAGCGTGCCTGGGAGAC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPRGSRC*EACLGD
Trigger: GTCTCCCAGGCACGCTTCTCAACACCGGCTACCCCT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACGGTCCCCTCCTCCCTaGACCACATGGCAGATCCAG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPRSPPP*TTWQIQ
Trigger: CTGGATCTGCCATGTGGTTCAGGGAGGAGGGGACCG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGGCAAATCACACCCATaGCCTGCCCTGCCCAAGGCC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPGKSHP*PALPKA
Trigger: GGCCTTGGGCAGGGCAGGGCATGGGTGTGATTTGCC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATCCATGGAGCGGAAGTaGTGCGATGCGCAACGGGGC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSMERK*CDAQRG
Trigger: GCCCCGTTGCGCATCGCACCACTTCCGCTCCATGGA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACAGCCCCGTGGTCCATaGAGCGGAAGTGGTGCGATG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPQPRGP*SGSGAM
Trigger: CATCGCACCACTTCCGCTCCATGGACCACGGGGCTG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATCCGCTCCTGAGACCTaGTCACCGCCAACAGCAGGG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSAPET*SPPTAG
Trigger: CCCTGCTGTTGGCGGTGACCAGGTCTCAGGAGCGGA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATGTGGCCGGTGGGGCTaGGGGGAGTGTAGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPCGRWG*GECSAL
Trigger: AAGAGCACTACACTCCCCCCAGCCCCACCGGCCACA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACACAGTTACCCACCGTaGGAGGTGGAGGGACCTGGG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPHSYPP*EVEGPG
Trigger: CCCAGGTCCCTCCACCTCCCACGGTGGGTAACTGTG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGTGGCCACTGACAGGTaGAGAGAAGGGGTCGGTGCT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPVATDR*REGVGA
Trigger: AGCACCGACCCCTTCTCTTCACCTGTCAGTGGCCAC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGTGTCAGGACGGAAATaGGCAAGCCTGCGTCTCCGG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPVSGRK*ASLRLR
Trigger: CCGGAGACGCAGGCTTGCTCATTTCCGTCCTGACAC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACAAACAGCCTGGAAATaGGCGCAGCCCCGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPQTAWK*AQPRGP
Trigger: TGGACCACGGGGCTGCGCGCATTTCCAGGCTGTTTG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAGCCTGCACCAGCCCTaGCTGCATCCTGAGACAGAC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSLHQP*LHPETD
Trigger: GTCTGTCTCAGGATGCAGGCAGGGCTGGTGCAGGCT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAAGAGAAGGGGTCGGTaGTCATCGGTCCCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPKRRGR*SSVPSS
Trigger: GGAGGAGGGGACCGATGAGCACCGACCCCTTCTCTT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCTGGACAAACAGCCTaGAAATGCGCGCAGCCCCGT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPGQTA*KCAQPR
Trigger: ACGGGGCTGCGCGCATTTCCAGGCTGTTTGTCCAGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGGAGGTGGAGGGACCTaGGCAAATCCCCGGGAAATG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPGGGGT*ANPREM
Trigger: CATTTCCCGGGGATTTGCCCAGGTCCCTCCACCTCC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACACTGTGGTGGCCACTaGCAGGTGAAGAGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPHCGGH*QVKRRG
Trigger: ACCCCTTCTCTTCACCTGTCAGTGGCCACCACAGTG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATGCACCAGCCCTGCCTaGATCCTGAGACAGACACCA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPCTSPA*ILRQTP
Trigger: TGGTGTCTGTCTCAGGATGCAGGCAGGGCTGGTGCA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATGGTTGCTCGATGCCTaGTGGTGCCAAGTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPWLLDA*WCQVEG
Trigger: CCCTTCCACTTGGCACCAGCAGGCATCGAGCAACCA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATCCCTGGTTGCTCGATaGCTGCTGGTGCCAAGTGGA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSLVAR*LLVPSG
Trigger: TCCACTTGGCACCAGCAGGCATCGAGCAACCAGGGA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAACAGGGACAACACATTaGCCCACACAGGCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPTGTTH*PTQALA
Trigger: AGCCAGGGCCTGTGTGGGGCAATGTGTTGTCCCTGT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAGGTGGAGCCCTCTGTaGGAGCTCAGAATGGGTGTC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPRWSPL*ELRMGV
Trigger: GACACCCATTCTGAGCTCCCACAGAGGGCTCCACCT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGGACAATCCCTGTGCTaGCCCCAGAGTATCCTGTGC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPGQSLC*PQSILC
Trigger: GCACAGGATACTCTGGGGCCAGCACAGGGATTGTCC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGCCCTGCCTGCATCCTaGGACAGACACCATGTATCA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPALPAS*DRHHVS
Trigger: TGATACATGGTGTCTGTCTCAGGATGCAGGCAGGGC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAGGCCACAGCTAGAATaGGTCCAGAGAGAGGGACTG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPRPQLE*VQREGL
Trigger: CAGTCCCTCTCTCTGGACTCATTCTAGCTGTGGCCT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACTCGATGCCTGCTGGTaGCAAGTGGAAGGGAGTATG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPLDACW*QVEGSM
Trigger: CATACTCCCTTCCACTTGGCACCAGCAGGCATCGAG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAGCCTGGGTGCAGCCTaGAGTCCTGTTCAATGGAGT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSLGAA*SPVQWS
Trigger: ACTCCATTGAACAGGACTGCAGGCTGCACCCAGGCT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACAATGCGGGCTGCAGTaGAGTTACCTGCGGAGCTTT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPQCGLQ*SYLRSF
Trigger: AAAGCTCCGCAGGTAACTGCACTGCAGCCCGCATTG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGTTCTCAATGCGGGCTaGAGTGCAGTTACCTGCGGA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPVLNAG*SAVTCG
Trigger: TCCGCAGGTAACTGCACTGCAGCCCGCATTGAGAAC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCCCAGAGTATCCTGTaGACCTGGATGAGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPQSIL*TWMRLE
Trigger: TTCCAGCCTCATCCAGGTGCACAGGATACTCTGGGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAACTGGACAATCCCTGTaGTGGCCCCAGAGTATCCTG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPTGQSL*WPQSIL
Trigger: CAGGATACTCTGGGGCCAGCACAGGGATTGTCCAGT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAGTCACTGGCAGGCCTaGCATTCATTCACTCTGGGG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSHWQA*HSFTLG
Trigger: CCCCAGAGTGAATGAATGGCAGGCCTGCCAGTGACT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCCTCAGCCCTCTCTTaGAAGCAGCCTGGACAAACA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPSALS*KQPGQT
Trigger: TGTTTGTCCAGGCTGCTTCCAAGAGAGGGCTGAGGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAAGTGGAAGGGAGTATaGAGAAGCCTGCACCAGCCC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPKWKGV*RSLHQP
Trigger: GGGCTGGTGCAGGCTTCTCCATACTCCCTTCCACTT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATTGCTCGATGCCTGCTaGTGCCAAGTGGAAGGGAGT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPLLDAC*CQVEGS
Trigger: ACTCCCTTCCACTTGGCACCAGCAGGCATCGAGCAA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAATCTCCCATTAGCCTaGGTGCAGCCTGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPNLPLA*VQPAVL
Trigger: CAGGACTGCAGGCTGCACCCAGGCTAATGGGAGATT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGGGCTACCAGGGATGTaGCAGACCCACTTTTCAGGT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPGLPGM*QTHFSG
Trigger: ACCTGAAAAGTGGGTCTGCCACATCCCTGGTAGCCC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAGTCTCCATCAAGGGTaGGCTCCAGGCATCTCAGTT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSLHQG*APGISV
Trigger: AACTGAGATGCCTGGAGCTCACCCTTGATGGAGACT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATTTAAGATCCCTGGTTaGTCGATGCCTGCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPFKIPG*SMPAGA
Trigger: GGCACCAGCAGGCATCGAGCAACCAGGGATCTTAAA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCAAGGGGCAGCCTCTaGACATCGAGTAATTCCAGA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPRGSL*TSSNSR
Trigger: TCTGGAATTACTCGATGTGCAGAGGCTGCCCCTTGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACTCACCAAGAGCTTGTaGCCCAAGGCAAATCACACC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPLTKSL*PKANHT
Trigger: GGTGTGATTTGCCTTGGGCCACAAGCTCTTGGTGAG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATGTGGGAGCTCAGAATaGGTGTCCTCTCGCAATCAC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPCGSSE*VSSRNH
Trigger: GTGATTGCGAGAGGACACCCATTCTGAGCTCCCACA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCCGATGATACTGAGTaGGGATGGGACAAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPDDTE*GWDKKP
Trigger: AGGCTTCTTGTCCCATCCCCACTCAGTATCATCGGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACATCAGCACAGTCACTaGCAGGCCTGCCATTCATTC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPHQHSH*QACHSF
Trigger: GAATGAATGGCAGGCCTGCCAGTGACTGTGCTGATG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACTCCAAATAGGCCTGTaGTCGTGCGTGTCCAAGTAT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPLQIGL*SCVSKY
Trigger: ATACTTGGACACGCACGATCACAGGCCTATTTGGAG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACAGGAGTGGCCACACTaGGATGACAAAGCCATTACA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPQEWPH*DDKAIT
Trigger: TGTAATGGCTTTGTCATCTCAGTGTGGCCACTCCTG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCCTGCCCAAGGCCCTaGATCTTGGAAATTCTAAGA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPCPRP*ILEILR
Trigger: TCTTAGAATTTCCAAGATGCAGGGCCTTGGGCAGGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCAGCTTTCATACCCTaGCCTGCCGAATTAGAATGC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPAFIP*PAELEC
Trigger: GCATTCTAATTCGGCAGGGCAGGGTATGAAAGCTGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAAGAAATCCGTGTCCTaGCCCAAGCTTGTTGGCTCA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPKKSVS*PKLVGS
Trigger: TGAGCCAACAAGCTTGGGGCAGGACACGGATTTCTT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCCTCGGTGAGTGAATaGAGCTGTTCAAAGCAACGA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPSVSE*SCSKQR
Trigger: TCGTTGCTTTGAACAGCTGCATTCACTCACCGAGGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATCCTCGAAGAAGACATaGCCAATCCCAACTCCTTGG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSSKKT*PIPTPW
Trigger: CCAAGGAGTTGGGATTGGCCATGTCTTCTTCGAGGA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATCGAGTTGCAAACACTaGCCAGGTAATGGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSSCKH*PGNGSF
Trigger: GAAGCTGCCATTACCTGGCCAGTGTTTGCAACTCGA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGGGAAGAGCGAGGACTaGCCTATCTGTATTCTCATC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPGKSED*PICILI
Trigger: GATGAGAATACAGATAGGCCAGTCCTCGCTCTTCCC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACTAGAAACTCCAGCCTaGGTTTCCAGCTTTCATACC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPLETPA*VSSFHT
Trigger: GGTATGAAAGCTGGAAACTCAGGCTGGAGTTTCTAG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAATCCAATCTTTCCACTaGGGCCACAATAAAGCTCCC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPIQSFH*GHNKAP
Trigger: GGGAGCTTTATTGTGGCCTCAGTGGAAAGATTGGAT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATGGCATTCATCATGGTaGCCTTCTGGGATTAAGGAG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPWHSSW*PSGIKE
Trigger: CTCCTTAATCCCAGAAGGGCACCATGATGAATGCCA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACAGGAAGGTGCCACATaGCAAAGGATTCAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPQEGAT*QRIQER
Trigger: TCTTTCCTGAATCCTTTGGCATGTGGCACCTTCCTG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATGCAGTCCTGTTCAATaGAGTATTTGGAGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPCSPVQ*SIWRGQ
Trigger: CTGGCCTCTCCAAATACTCCATTGAACAGGACTGCA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCCATGATGTCTGTGTaGACTCATACAGGTATCATG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPMMSV*THTGIM
Trigger: CATGATACCTGTATGAGTTCACACAGACATCATGGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGTGGCCACACTGAGATaGCAAAGCCATTACAATTCT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPVATLR*QSHYNS
Trigger: AGAATTGTAATGGCTTTGTCATCTCAGTGTGGCCAC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATCGCGCTTTATCATGTaGAAGACTAGTAGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSRFIM*KTSSVQ
Trigger: CTGGACACTACTAGTCTTTCACATGATAAAGCGCGA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATTTCATACCCTGCCCTaGCGAATTAGAATGCTGCAA +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPFHTLP*RIRMLQ
Trigger: TTGCAGCATTCTAATTCGGCAGGGCAGGGTATGAAA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGCATTTCATTGTTGTTaGTACACACGTTCCATCCAG +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPAFHCC*YTRSIQ
Trigger: CTGGATGGAACGTGTGTATCAACAACAATGAAATGC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACAGTCAACTAATATCTaGAGTTCTCAAAGAGGGTCC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPQSTNI*SSQRGS
Trigger: GGACCCTCTTTGAGAACTGCAGATATTAGTTGACTG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CAA 90 bp TACAGTCTCCACCTCCTCGAAGAAGACATGGCCAATCCCAACTCCTaGGCCACGAGGGTGACCCACAGTCAACTAATATCTGCAGTTCTC +
Preference number: 2 (lower is better)
Translates to: YSLHLLEEDMANPNS*ATRVTHSQLISAVL
Trigger: GAGAACTGCAGATATTAGTTGACTGTGGGTCACCCTCGTGGCCAAGGAGTTGGGATTGGCCATGTCTTCTTCGAGGAGGTGGAGACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCTGCCGAATTAGAATaGTGCAAATCTGATAATGAT +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPAELE*CKSDND
Trigger: ATCATTATCAGATTTGCAGCATTCTAATTCGGCAGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGCCGAATTAGAATGCTaGAAATCTGATAATGATTAC +
Preference number: 2 (lower is better)
Translates to: RLEETGPPGVSKGERRLPAELEC*KSDNDY
Trigger: GTAATCATTATCAGATTTGCAGCATTCTAATTCGGC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 72 bp CGCAGCCCCGTGGTCCATGGAGCGGAAGTGGTGCGATaGGCAACGGGGCCGCCTCCTTCTCCGCGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: RSPVVHGAEVVR*ATGPPPSPRPA
Trigger: GGCTGGGCGCGGAGAAGGAGGCGGCCCCGTTGCGCATCGCACCACTTCCGCTCCATGGACCACGGGGCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 72 bp ATGCGCGCAGCCCCGTGGTCCATGGAGCGGAAGTGGTaGGATGCGCAACGGGGCCGCCTCCTTCTCCGCGCC +
Preference number: 3 (lower is better)
Translates to: MRAAPWSMERKW*DAQRGRLLLRA
Trigger: GGCGCGGAGAAGGAGGCGGCCCCGTTGCGCATCGCACCACTTCCGCTCCATGGACCACGGGGCTGCGCGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 72 bp CAAACAGCCTGGAAATGCGCGCAGCCCCGTGGTCCATaGAGCGGAAGTGGTGCGATGCGCAACGGGGCCGCC +
Preference number: 3 (lower is better)
Translates to: QTAWKCAQPRGP*SGSGAMRNGAA
Trigger: GGCGGCCCCGTTGCGCATCGCACCACTTCCGCTCCATGGACCACGGGGCTGCGCGCATTTCCAGGCTGTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 72 bp GCCTGGACAAACAGCCTGGAAATGCGCGCAGCCCCGTaGTCCATGGAGCGGAAGTGGTGCGATGCGCAACGG +
Preference number: 3 (lower is better)
Translates to: AWTNSLEMRAAP*SMERKWCDAQR
Trigger: CCGTTGCGCATCGCACCACTTCCGCTCCATGGACCACGGGGCTGCGCGCATTTCCAGGCTGTTTGTCCAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGCCAATCCCAACTCCTaGGCCACGAGGGTGACCCAC +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPANPNS*ATRVTH
Trigger: GTGGGTCACCCTCGTGGCCAAGGAGTTGGGATTGGC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGACAGGGACAACACATaGCCCCACACAGGCCCTGGC +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPDRDNT*PHTGPG
Trigger: GCCAGGGCCTGTGTGGGGCAATGTGTTGTCCCTGTC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGGGAGTGTAGTGCTCTaGGAGGCGGGCTACCAGGGA +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPGSVVL*EAGYQG
Trigger: TCCCTGGTAGCCCGCCTCCAAGAGCACTACACTCCC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 72 bp TCAGCCCTCTCTTGGAAGCAGCCTGGACAAACAGCCTaGAAATGCGCGCAGCCCCGTGGTCCATGGAGCGGA +
Preference number: 3 (lower is better)
Translates to: SALSWKQPGQTA*KCAQPRGPWSG
Trigger: TCCGCTCCATGGACCACGGGGCTGCGCGCATTTCCAGGCTGTTTGTCCAGGCTGCTTCCAAGAGAGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 72 bp CTCTCTTGGAAGCAGCCTGGACAAACAGCCTGGAAATaGGCGCAGCCCCGTGGTCCATGGAGCGGAAGTGGT +
Preference number: 3 (lower is better)
Translates to: LSWKQPGQTAWK*AQPRGPWSGSG
Trigger: ACCACTTCCGCTCCATGGACCACGGGGCTGCGCGCATTTCCAGGCTGTTTGTCCAGGCTGCTTCCAAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATCCCTCAGCCCTCTCTaGGAAGCAGCCTGGACAAAC +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSLSPL*EAAWTN
Trigger: GTTTGTCCAGGCTGCTTCCAAGAGAGGGCTGAGGGA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACTCCGCAGAGCACACTaGAGTCCCCAGGGTAAGGAT +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPLRRAH*SPQGKD
Trigger: ATCCTTACCCTGGGGACTCAAGTGTGCTCTGCGGAG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 72 bp CTGCTGGTGCCAAGTGGAAGGGAGTATGGAGAAGCCTaGACCAGCCCTGCCTGCATCCTGAGACAGACACCA +
Preference number: 3 (lower is better)
Translates to: LLVPSGREYGEA*TSPACILRQTP
Trigger: TGGTGTCTGTCTCAGGATGCAGGCAGGGCTGGTGCAGGCTTCTCCATACTCCCTTCCACTTGGCACCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACACACAACGGACTCTTaGGAACTGAGCCTGGAGGAG +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPHTTDS*ELSLEE
Trigger: CTCCTCCAGGCTCAGTTCCAAAGAGTCCGTTGTGTG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCAAGGCCCTGCATCTaGGAAATTCTAAGAGGTCGG +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPRPCI*EILRGR
Trigger: CCGACCTCTTAGAATTTCCAAGATGCAGGGCCTTGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAACTCTCACCAAGAGCTaGTGGCCCAAGGCAAATCAC +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPTLTKS*WPKANH
Trigger: GTGATTTGCCTTGGGCCACAAGCTCTTGGTGAGAGT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATTTGCTGTCCCATCATaGCTGTTCCACGCATCCCTG +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPFAVPS*LFHASL
Trigger: CAGGGATGCGTGGAACAGCAATGATGGGACAGCAAA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGTCGAGGCAAGAGGTTaGGCAACACTTCCCTTGACT +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPVEARG*ATLPLT
Trigger: AGTCAAGGGAAGTGTTGCCAAACCTCTTGCCTCGAC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACTCCAGGCATCTCAGTaGTCATCAGCAGCATCGACA +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPLQASQ*SSAAST
Trigger: TGTCGATGCTGCTGATGACAACTGAGATGCCTGGAG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 72 bp AATCTTCAAAGCTCTCCATCCTCAATGTGGGGTCCCTaGGCCAGTGGCATCAGCCTCACCAGGAAACCTGTT +
Preference number: 3 (lower is better)
Translates to: NLQSSPSSMWGP*ASGISLTRKPV
Trigger: AACAGGTTTCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGATGGAGAGCTTTGAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504806.5
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGATCTCCATGTCACTTaGGAGATAAAAGTGTGGACA +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPDLHVT*EIKVWT
Trigger: TGTCCACACTTTTATCTCCAAAGTGACATGGAGATC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 72 bp GGAAGGGAGTATGGAGAAGCCTGCACCAGCCCTGCCTaGATCCTGAGACAGACACCATGTATCATGATGTAT +
Preference number: 3 (lower is better)
Translates to: GREYGEACTSPA*ILRQTPCIMMY
Trigger: ATACATCATGATACATGGTGTCTGTCTCAGGATGCAGGCAGGGCTGGTGCAGGCTTCTCCATACTCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 72 bp AAGTGGAAGGGAGTATGGAGAAGCCTGCACCAGCCCTaGCTGCATCCTGAGACAGACACCATGTATCATGAT +
Preference number: 3 (lower is better)
Translates to: KWKGVWRSLHQP*LHPETDTMYHD
Trigger: ATCATGATACATGGTGTCTGTCTCAGGATGCAGGCAGGGCTGGTGCAGGCTTCTCCATACTCCCTTCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 72 bp TCAACACACCAATCTCCCATTAGCCTGGGTGCAGCCTaGAGTCCTGTTCAATGGAGTATTTGGAGAGGCCAG +
Preference number: 3 (lower is better)
Translates to: STHQSPISLGAA*SPVQWSIWRGQ
Trigger: CTGGCCTCTCCAAATACTCCATTGAACAGGACTGCAGGCTGCACCCAGGCTAATGGGAGATTGGTGTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 72 bp CTTGGCCACGAGGGTGACCCACAGTCAACTAATATCTaGAGTTCTCAAAGAGGGTCCAGTCTCCTGTGGCAT +
Preference number: 3 (lower is better)
Translates to: LGHEGDPQSTNI*SSQRGSSLLWH
Trigger: ATGCCACAGGAGACTGGACCCTCTTTGAGAACTGCAGATATTAGTTGACTGTGGGTCACCCTCGTGGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATGCATTTCATTGTTGTaGATACACACGTTCCATCCA +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPCISLL*IHTFHP
Trigger: TGGATGGAACGTGTGTATCAACAACAATGAAATGCA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAGGTGCATTTCATTGTaGTTGATACACACGTTCCAT +
Preference number: 3 (lower is better)
Translates to: RLEETGPPGVSKGERRLPRCISL*LIHTFH
Trigger: ATGGAACGTGTGTATCAACAACAATGAAATGCACCT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR GCA 72 bp CAAAGAGGGTCCAGTCTCCTGTGGCATTCATCATGGTaGCCTTCTGGGATTAAGGAGGAACTCACTGCAATC +
Preference number: 3 (lower is better)
Translates to: QRGSSLLWHSSW*PSGIKEELTAI
Trigger: GATTGCAGTGAGTTCCTCCTTAATCCCAGAAGGGCACCATGATGAATGCCACAGGAGACTGGACCCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR TCA 72 bp ATGGCCAGAGAGCCATTAGAACTAGAAACTCCAGCCTaGGTTTCCAGCTTTCATACCCTGCCCTGCCGAATT +
Preference number: 3 (lower is better)
Translates to: MAREPLELETPA*VSSFHTLPCRI
Trigger: AATTCGGCAGGGCAGGGTATGAAAGCTGGAAACTCAGGCTGGAGTTTCTAGTTCTAATGGCTCTCTGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CCA 72 bp ACACTGTATCATCAACACACCAATCTCCCATTAGCCTaGGTGCAGCCTGCAGTCCTGTTCAATGGAGTATTT +
Preference number: 3 (lower is better)
Translates to: TLYHQHTNLPLA*VQPAVLFNGVF
Trigger: AAATACTCCATTGAACAGGACTGCAGGCTGCACCCAGGCTAATGGGAGATTGGTGTGTTGATGATACAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACTCGAGCGCGGGGACTaGGCACCTGGCAGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPLERGD*APGSVA
Trigger: GGCAACGCTGCCAGGTGCCCAGTCCCCGCGCTCGAG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGCAGCCCCACGTTGTTaGCGCAGGCGGCGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPAAPRC*RRRRAG
Trigger: TCCTGCGCGCCGCCTGCGCCAACAACGTGGGGCTGC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAAAGTCTCCGGAGGCTaGGCGAGCCCCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPKVSGG*ASPWGG
Trigger: CCCACCCCAGGGGCTCGCTCAGCCTCCGGAGACTTT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGGCACCTGGCAGCGTTaGCCCAGAGCTGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPGTWQR*PRAGDS
Trigger: GCTGTCCCCAGCTCTGGGGCAACGCTGCCAGGTGCC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR GCA 90 bp GCTCTCCATCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGACGTCCGAGGCGATGCTaGGGGTGTCTGGCAGACTCG +
Preference number: 4 (lower is better)
Translates to: ALHPQCGVPGPVASASPGRPRRC*GCLADS
Trigger: CGAGTCTGCCAGACACCCGCAGCATCGCCTCGGACG...TCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGATGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACGGGGACTGGGCACCTaGCAGCGTTGCCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPRGLGT*QRCPRA
Trigger: AGCTCTGGGGCAACGCTGCCAGGTGCCCAGTCCCCG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACGCGGCCCGTGTAAGTaGCCCACTCCTGCGGCGACA +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPRGPCK*PTPAAT
Trigger: TGTCGCCGCAGGAGTGGGCCACTTACACGGGCCGCG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCAGCAGCCTCTGCATaGGACGGACGGCATCCACGC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPAASA*DGRHPR
Trigger: GCGTGGATGCCGTCCGTCTCATGCAGAGGCTGCTGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACGTCCGAGGCGATGCTaGGGGTGTCTGGCAGACTCG +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPRPRRC*GCLADS
Trigger: CGAGTCTGCCAGACACCCGCAGCATCGCCTCGGACG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR GCA 90 bp GCTCTCCATCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGAAGTCGTCCGAGGCGATaGTGCGGGTGTCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ALHPQCGVPGPVASASPGSRPRR*CGCLAD
Trigger: GTCTGCCAGACACCCGCAGCATCGCCTCGGACGACT...TCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGATGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR GCA 90 bp GCTCTCCATCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGATACTTCTCCCAGAACTaGTCCGGGCAGGGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ALHPQCGVPGPVASASPGYFSQN*SGQGRS
Trigger: GGAGCGCCCCTGCCCGGAGCAGTTCTGGGAGAAGTA...TCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGATGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGCAGTCCCATGCAGGTaGCGGCTGAAAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPAVPCR*RLKAAG
Trigger: CCCAGCCGCTTTCAGCCGGCACCTGCATGGGACTGC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCTCGCGCCCCTTCCTaGCCAGAGTTCAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPRAPS*PEFRAR
Trigger: CCTGGCTCTGAACTCTGGCCAGGAAGGGGCGCGAGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CCA 90 bp TCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGAAACCTGTTCGCGGCCCGTGTAAGTaGCCCACTCCTGCGGCGACA +
Preference number: 4 (lower is better)
Translates to: SSMWGPWASGISLTRKPVRGPCK*PTPAAT
Trigger: TGTCGCCGCAGGAGTGGGCCACTTACACGGGCCGCG...AACAGGTTTCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGTCATCCGGACCATGTaGTCCAGGACGCCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPVIRTM*SRTPPS
Trigger: GGACGGGGGCGTCCTGGACCACATGGTCCGGATGAC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR TCA 90 bp GCTCTCCATCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGACTTTCATCAGGGCGGTaGACCCGAACGCGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALHPQCGVPGPVASASPGLSSGR*TRTRSS
Trigger: GGAGGAACGCGTTCGGGTTCACCGCCCTGATGAAAG...TCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGATGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR TCA 90 bp CAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGAAACCTGTTGATCCCAGCAGCCTCTGCATaGGACGGACGGCATCCACGC +
Preference number: 4 (lower is better)
Translates to: QCGVPGPVASASPGNLLIPAASA*DGRHPR
Trigger: GCGTGGATGCCGTCCGTCTCATGCAGAGGCTGCTGG...GATCAACAGGTTTCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAGTCGTCCGAGGCGATaGTGCGGGTGTCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSRPRR*CGCLAD
Trigger: GTCTGCCAGACACCCGCAGCATCGCCTCGGACGACT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATACTTCTCCCAGAACTaGTCCGGGCAGGGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPYFSQN*SGQGRS
Trigger: GGAGCGCCCCTGCCCGGAGCAGTTCTGGGAGAAGTA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATCTTCCAGGGCGCAGTaGGCCTCTCCTTCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSSRAQ*ASPSAP
Trigger: AGGCGCAGAAGGAGAGGCGCACTGCGCCCTGGAAGA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAGAGCTGGGGACAGCTaGCGCGGGAGAAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPRAGDS*RGRSRS
Trigger: GCTTCTGCTTCTCCCGCGCCAGCTGTCCCCAGCTCT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CCA 90 bp CAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGAAACCTGTTGATCGTCATCCGGACCATGTaGTCCAGGACGCCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: QCGVPGPVASASPGNLLIVIRTM*SRTPPS
Trigger: GGACGGGGGCGTCCTGGACCACATGGTCCGGATGAC...GATCAACAGGTTTCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATTCTGCGCCTCGGCCTaGCGCTTCTTTTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPFCASA*RFFSAS
Trigger: GGAGGCCGAAAAGAAGCGCCAGGCCGAGGCGCAGAA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CCA 90 bp GCTCTCCATCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGATCAATGTGGGGTCCCTaGGCCAGTGGCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ALHPQCGVPGPVASASPGSMWGP*ASGISL
Trigger: GAGGCTGATGCCACTGGCCCAGGGACCCCACATTGA...TCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGATGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACTTTCATCAGGGCGGTaGACCCGAACGCGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPLSSGR*TRTRSS
Trigger: GGAGGAACGCGTTCGGGTTCACCGCCCTGATGAAAG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGGTAAAGAATCCTCTTaGGCCTGGGCCCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPGKESS*AWAPPG
Trigger: GCCTGGAGGGGCCCAGGCCCAAGAGGATTCTTTACC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAAAGCAGGTTCCATCTaGCACTGCCTGGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPKAGSI*HCLGPT
Trigger: TGTGGGCCCCAGGCAGTGTCAGATGGAACCTGCTTT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR TCA 90 bp TCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGAAACCTGTTGTCTTCAGTGCCCACTaGGAGGGGTCCTTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: SSMWGPWASGISLTRKPVVFSAH*EGSFAV
Trigger: GACGGCAAAGGACCCCTCTCAGTGGGCACTGAAGAC...AACAGGTTTCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATGTCCACATTGGCACTaGCTGCTGCCAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPCPHWH*LLPRAV
Trigger: CACAGCCCTTGGCAGCAGGCAGTGCCAATGTGGACA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGCGCCGATTGCCAGGTaGAGAATCCACACAGTTACC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPAPIAR*RIHTVT
Trigger: GGTAACTGTGTGGATTCTGCACCTGGCAATCGGCGC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR GCA 90 bp GCTCTCCATCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGAGGAAACCTGTTGATCTaGTCATTCTTGGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: ALHPQCGVPGPVASASPGGNLLI*SFLGPT
Trigger: GGTGGGGCCCAAGAATGAGCAGATCAACAGGTTTCC...TCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGATGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR CCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAATGCACCGAGAGGCGTaGAGGGAAGATGCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPMHREA*REDASS
Trigger: ACTGCTTGCATCTTCCCTCCACGCCTCTCGGTGCAT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR TCA 90 bp GCTCTCCATCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGAAGCACAGGAAAGTCATaGACACATGCTCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: ALHPQCGVPGPVASASPGSTGKS*THAHLP
Trigger: AGGCAGGTGAGCATGTGTTCATGACTTTCCTGTGCT...TCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGATGGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATTAGTGATGATAGCGTaGCCTGCCTGTGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPLVMIA*PACAAV
Trigger: CACAGCTGCACAGGCAGGGCACGCTATCATCACTAA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATCCCAGCATGACCGCTaGAATGGCATTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSQHDR*NGIHPT
Trigger: AGTGGGATGAATGCCATTGCAGCGGTCATGCTGGGA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAACATGTGCTCGCCCGTaGACACACTCACAGCTTAGT +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPTCARP*THSQLS
Trigger: ACTAAGCTGTGAGTGTGTGCACGGGCGAGCACATGT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACACGGACCATTGCTTTaGTGGAAAGTTTCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPHGPLL*WKVSWG
Trigger: ACCCCACGAAACTTTCCATCAAAGCAATGGTCCGTG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR TCA 90 bp CAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGAAACCTGTTGATCCACCAGGAAACCTGTTaGTCTGCTCATTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: QCGVPGPVASASPGNLLIHQETC*SAHSWA
Trigger: GGCCCAAGAATGAGCAGATCAACAGGTTTCCTGGTG...GATCAACAGGTTTCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR GCA 90 bp TCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGAAACCTGTTTGTCTAAGGAAACTATaGCCATGGGGACAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSMWGPWASGISLTRKPVCLRKL*PWGQGQ
Trigger: CTGCCCCTGTCCCCATGGGCATAGTTTCCTTAGACA...AACAGGTTTCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATGGCATTCATCCCACTaGAGTTGTCATCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPWHSSH*SCHQWD
Trigger: GTCCCATTGATGACAACTGCAGTGGGATGAATGCCA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR GCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGCCAACACGGACCATTaGTTTGATGGAAAGTTTCGT +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPANTDH*FDGKFR
Trigger: ACGAAACTTTCCATCAAAGCAATGGTCCGTGTTGGC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR TCA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAGTTCATCTGGATGTATaGGTACACATACATGTGCTC +
Preference number: 4 (lower is better)
Translates to: RLEETGPPGVSKGERRLPVHLDV*VHIHVL
Trigger: GAGCACATGTATGTGTACTCATACATCCAGATGAAC...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
3UTR CAA 72 bp CACCTCCTCGAAGAAGACATGGCCAATCCCAACTCCTaGGCCACGAGGGTGACCCACAGTCAACTAATATCT +
Preference number: 4 (lower is better)
Translates to: HLLEEDMANPNS*ATRVTHSQLIS
Trigger: AGATATTAGTTGACTGTGGGTCACCCTCGTGGCCAAGGAGTTGGGATTGGCCATGTCTTCTTCGAGGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CAA 90 bp GCTCTCCATCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGACGCAGCAGCCCCACGTaGTTGGCGCAGGCGGCGCGC +
Preference number: 5 (lower is better)
Translates to: ALHPQCGVPGPVASASPGRSSPT*LAQAAR
Trigger: GCGCGCCGCCTGCGCCAACAACGTGGGGCTGCTGCG...TCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGATGGAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR CAA 90 bp GCTCTCCATCCTCAATGTGGGGTCCCTGGGCCAGTGGCATCAGCCTCACCAGGAAGCAGCCCCACGTTGTaGGCGCAGGCGGCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: ALHPQCGVPGPVASASPGSSPTL*AQAARR
Trigger: CCTGCGCGCCGCCTGCGCCAACAACGTGGGGCTGCT...TCCTGGTGAGGCTGATGCCACTGGCCCAGGGACCCCACATTGAGGATGGAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504806.5
CDS-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACGCAGCAGCCCCACGTaGTTGGCGCAGGCGGCGCGC +
Preference number: 5 (lower is better)
Translates to: RLEETGPPGVSKGERRLPRSSPT*LAQAAR
Trigger: GCGCGCCGCCTGCGCCAACAACGTGGGGCTGCTGCG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAAGCAGCCCCACGTTGTaGGCGCAGGCGGCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: RLEETGPPGVSKGERRLPSSPTL*AQAARR
Trigger: CCTGCGCGCCGCCTGCGCCAACAACGTGGGGCTGCT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATTCCTCTTCTCCTCCTaGGCCTCCTTGTACCGCCAC +
Preference number: 5 (lower is better)
Translates to: RLEETGPPGVSKGERRLPFLFSS*ASLYRH
Trigger: GTGGCGGTACAAGGAGGCCAAGGAGGAGAAGAGGAA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCACCTCAGGATATGGTGTaGATTCTGACGGTAACCTGC +
Preference number: 5 (lower is better)
Translates to: RLEETGPPGVSKGERRLPPQDMV*ILTVTC
Trigger: GCAGGTTACCGTCAGAATCAACACCATATCCTGAGG...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCAACACGGACCATTGCTTaGATGGAAAGTTTCGTGGGG +
Preference number: 5 (lower is better)
Translates to: RLEETGPPGVSKGERRLPTRTIA*MESFVG
Trigger: CCCCACGAAACTTTCCATCAAAGCAATGGTCCGTGT...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7
CDS-3UTR CAA 90 bp AGGCTGGAAGAAACAGGGCCCCCAGGTGTTTCCAAAGGGGAGCGCCGATTGCCATTCATCCCACTGCAGTaGTCATCAATGGGACTTTAT +
Preference number: 5 (lower is better)
Translates to: RLEETGPPGVSKGERRLPFIPLQ*SSMGLY
Trigger: ATAAAGTCCCATTGATGACAACTGCAGTGGGATGAA...TGGCAATCGGCGCTCCCCTTTGGAAACACCTGGGGGCCCTGTTTCTTCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296657.7