RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD31 (Homo sapiens)

Ensembl gene IDs: ENSG00000145700

Ensembl transcript IDs: ENST00000274361.3, ENST00000504022.1, ENST00000506364.6, ENST00000674120.1

Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGTCACGATCTCCACTCAAAACTCTGACCCCCTCAGAGGGCACCTaGGCCGCCCTGGCGCGAGGGTTCAGGCACTGTGGCCCTAATGAT +
Preference number: 1 (lower is better)
Translates to: WSRSPLKTLTPSEGT*AALARGFRHCGPND
Trigger: ATCATTAGGGCCACAGTGCCTGAACCCTCGCGCCAGGGCGGCCCAGGTGCCCTCTGAGGGGGTCAGAGTTTTGAGTGGAGATCGTGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR TCA 90 bp ATCAGGGCTTTCACTAGGGGCAGATTTCCTCTTCTGACAGCTAAATaGAGCTGGCTTTCCCCTCTGGCATTCCTCTTGTTGATCCTACCT +
Preference number: 1 (lower is better)
Translates to: IRAFTRGRFPLLTAK*SWLSPLAFLLLILP
Trigger: AGGTAGGATCAACAAGAGGAATGCCAGAGGGGAAAGCCAGCTTCATTTAGCTGTCAGAAGAGGAAATCTGCCCCTAGTGAAAGCCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR GCA 90 bp GGTTCTGGATGTGTTTCTCTTTGGAAACTGAACAAGCCTCAGTACTaGTATCTAATCCATTTCTCAGGCTTGACAGAGTTAAGCTGGAAG +
Preference number: 1 (lower is better)
Translates to: GSGCVSLWKLNKPQY*YLIHFSGLTELSWK
Trigger: CTTCCAGCTTAACTCTGTCAAGCCTGAGAAATGGATTAGATAGCAGTACTGAGGCTTGTTCAGTTTCCAAAGAGAAACACATCCAGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CCA 90 bp CTTCCTATACCTTTTGGTACGTTTGTGTTGGGATCTTTGACGTTATaGAGATTGCCCTTTCTGAGTCCTGTAGAGTATATCTGGTCAAGA +
Preference number: 1 (lower is better)
Translates to: LPIPFGTFVLGSLTL*RLPFLSPVEYIWSR
Trigger: TCTTGACCAGATATACTCTACAGGACTCAGAAAGGGCAATCTCCATAACGTCAAAGATCCCAACACAAACGTACCAAAAGGTATAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CCA 90 bp CAGTACTGCTATCTAATCCATTTCTCAGGCTTGACAGAGTTAAGCTaGAAGGTTCACACAATTCTTCTGGAAGGTCATTATGAGTTTCTG +
Preference number: 1 (lower is better)
Translates to: QYCYLIHFSGLTELS*KVHTILLEGHYEFL
Trigger: CAGAAACTCATAATGACCTTCCAGAAGAATTGTGTGAACCTTCCAGCTTAACTCTGTCAAGCCTGAGAAATGGATTAGATAGCAGTACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR TCA 90 bp GAGATTGCCCTTTCTGAGTCCTGTAGAGTATATCTGGTCAAGAGTTaGTTGTTTATGCTTGGATTTACCAAATTTTGTGTTTTTGGGATC +
Preference number: 1 (lower is better)
Translates to: EIALSESCRVYLVKS*LFMLGFTKFCVFGI
Trigger: GATCCCAAAAACACAAAATTTGGTAAATCCAAGCATAAACAATCAACTCTTGACCAGATATACTCTACAGGACTCAGAAAGGGCAATCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTGCACCTGGGCCGCCCTaGCGCGAGGGTTCAGGCACT +
Preference number: 2 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFAPGPP*REGSGT
Trigger: AGTGCCTGAACCCTCGCGCCAGGGCGGCCCAGGTGC...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp GGTGGGAACAGACTGTGTTTGCTTATTTACAAGCTCTCAGCTCAGGCACGGCTGCTCCACTCAAAACTCTaGCCCCCTCAGAGGGCACCT +
Preference number: 2 (lower is better)
Translates to: GGNRLCLLIYKLSAQARLLHSKL*PPQRAP
Trigger: AGGTGCCCTCTGAGGGGGTCAGAGTTTTGAGTGGAG...CAGCCGTGCCTGAGCTGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGTGCCCCACAAGGCTCTaGTCCTGCCCACAAGCACAT +
Preference number: 2 (lower is better)
Translates to: SSDALYHCLRQQSLDVPECPTRL*SCPQAH
Trigger: ATGTGCTTGTGGGCAGGATCAGAGCCTTGTGGGGCA...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGATGGCACTGAGGGTCTaGTGCACAGAAAGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: SSDALYHCLRQQSLDVPEMALRV*CTERLS
Trigger: AGAAAGCCTTTCTGTGCATCAGACCCTCAGTGCCAT...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGCTTGTAGAATGGCACTaGGGGTCTGATGCACAGAAA +
Preference number: 2 (lower is better)
Translates to: SSDALYHCLRQQSLDVPELVEWH*GSDAQK
Trigger: TTTCTGTGCATCAGACCCTCAGTGCCATTCTACAAG...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCACTTCTGACAGCTAAATaGAGCTGGCTTTCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPLLTAK*SWLSPL
Trigger: CAGAGGGGAAAGCCAGCTTCATTTAGCTGTCAGAAG...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGGCAGATTTCCTCTTCTaGCAGCTAAATGAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQADFLF*QLNEAG
Trigger: GCCAGCTTCATTTAGCTGTCAGAAGAGGAAATCTGC...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR GCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGTGTCTAGTGGGTCAATaGTACTCCTTTGAGCTGATG +
Preference number: 2 (lower is better)
Translates to: SSDALYHCLRQQSLDVPECLVGQ*YSFELM
Trigger: CATCAGCTCAAAGGAGTAGCATTGACCCACTAGACA...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTCATTTTATCCCTAGCTaGTTGGGGGTAGGTGGGAAC +
Preference number: 2 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFHFIPS*LGVGGN
Trigger: GTTCCCACCTACCCCCAACCAGCTAGGGATAAAATG...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp TTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGCTACTCCCTACACTAGCTTCATaGAGTGCTGTCCAACCAGCA +
Preference number: 2 (lower is better)
Translates to: FGFLCWYTSSMSSGSMLLPTLAS*SAVQPA
Trigger: TGCTGGTTGGACAGCACTTCATGAAGCTAGTGTAGG...GAGTAGCATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCATGTTCCTGGAGAGTGTaGGGCTGCTTATCTGTAGTA +
Preference number: 2 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPCSWRV*GCLSVV
Trigger: TACTACAGATAAGCAGCCTCACACTCTCCAGGAACA...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCATCATTAGATGCCTCATaGAGTGGTGTCCAACCTGCA +
Preference number: 2 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPSLDAS*SGVQPA
Trigger: TGCAGGTTGGACACCACTTCATGAGGCATCTAATGA...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGCTCCGGTTAATGCTATaGAGAGATATTTTGTTCACC +
Preference number: 2 (lower is better)
Translates to: SSDALYHCLRQQSLDVPELRLML*RDILFT
Trigger: GGTGAACAAAATATCTCTTCATAGCATTAACCGGAG...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGTCAATGCTACTCCTTTaGGCTGATGTAAGGCATTTT +
Preference number: 2 (lower is better)
Translates to: SSDALYHCLRQQSLDVPESMLLL*ADVRHF
Trigger: AAAATGCCTTACATCAGCTCAAAGGAGTAGCATTGA...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGGAAGTGTGGTTAGGCTaGCTGCTTTTAACTCATTTT +
Preference number: 2 (lower is better)
Translates to: SSDALYHCLRQQSLDVPEEVWLG*LLLTHF
Trigger: AAAATGAGTTAAAAGCAGTCAGCCTAACCACACTTC...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR GCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTACAGATCATCCCTTTCTaGTTTCTGCTTGGCAAGCAC +
Preference number: 2 (lower is better)
Translates to: GASSETYLKSSFPRYVTLQIIPF*FLLGKH
Trigger: GTGCTTGCCAAGCAGAAAGCAGAAAGGGATGATCTG...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR GCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGGAGAAGGCATGCCTTTaGACATTCCTCTTGTATCAG +
Preference number: 2 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMEKACL*TFLLYQ
Trigger: CTGATACAAGAGGAATGTGCAAAGGCATGCCTTCTC...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR GCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCAGATCTGACTGTCATCTaGACATGGAACAACAGAAAC +
Preference number: 2 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPDLTVI*TWNNRN
Trigger: GTTTCTGTTGTTCCATGTGCAGATGACAGTCAGATC...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTACACAAGCACATGTTCTaGTCACGATCTCCACTCAAA +
Preference number: 2 (lower is better)
Translates to: GASSETYLKSSFPRYVTLHKHMF*SRSPLK
Trigger: TTTGAGTGGAGATCGTGACCAGAACATGTGCTTGTG...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCAGGATCTTTGACGTTATaGAGATTGCCCTTTCTGAGT +
Preference number: 2 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPGSLTL*RLPFLS
Trigger: ACTCAGAAAGGGCAATCTCCATAACGTCAAAGATCC...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGCGTTCTGTTTCATCTTaGGACTGCTGTAATATTGTA +
Preference number: 2 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQRSVSS*DCCNIV
Trigger: TACAATATTACAGCAGTCTCAAGATGAAACAGAACG...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTAATTTTGGTGGTTCAATaGAAGTCCAGACTGGCGAAA +
Preference number: 2 (lower is better)
Translates to: GASSETYLKSSFPRYVTLILVVQ*KSRLAK
Trigger: TTTCGCCAGTCTGGACTTTCATTGAACCACCAAAAT...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTATTTCTCTTTGGAAACTaGACAAGCCTCAGTACTGCT +
Preference number: 2 (lower is better)
Translates to: GASSETYLKSSFPRYVTLFLFGN*TSLSTA
Trigger: AGCAGTACTGAGGCTTGTTCAGTTTCCAAAGAGAAA...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR GCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTACTTGTTGATCCTACCTaGTTTCATTCCTGGTTTGTG +
Preference number: 2 (lower is better)
Translates to: GASSETYLKSSFPRYVTLLVDPT*FHSWFV
Trigger: CACAAACCAGGAATGAAAGCAGGTAGGATCAACAAG...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGTCATACATAAATCCTTaGCCTCATCCAAAGCACATT +
Preference number: 2 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQSYINP*PHPKHI
Trigger: AATGTGCTTTGGATGAGGCCAAGGATTTATGTATGA...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCATCTTCCTATACCTTTTaGTACGTTTGTGTTGGGATC +
Preference number: 2 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPSSYTF*YVCVGI
Trigger: GATCCCAACACAAACGTACCAAAAGGTATAGGAAGA...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCAAAAAAGTTGGTGCTCTaGGAATATAATCCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPKKLVL*EYNPVA
Trigger: AGCCACAGGATTATATTCCCAGAGCACCAACTTTTT...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCAATAATATTTGATGGATaGGCAGCATTTTCGGCAAGG +
Preference number: 2 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPIIFDG*AAFSAR
Trigger: CCTTGCCGAAAATGCTGCCCATCCATCAAATATTAT...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 90 bp ATACCTTTTGGTACGTTTGTGTTGGGATCTTTGACGTTATGGAGATaGCCCTTTCTGAGTCCTGTAGAGTATATCTGGTCAAGAGTTGAT +
Preference number: 2 (lower is better)
Translates to: IPFGTFVLGSLTLWR*PFLSPVEYIWSRVD
Trigger: ATCAACTCTTGACCAGATATACTCTACAGGACTCAGAAAGGGCAATCTCCATAACGTCAAAGATCCCAACACAAACGTACCAAAAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 90 bp TGGGACCAAGTTACTGTTTTCATGAGATTTATAAAGTACATGGTGTaGTTCCTGGAGAGTGTGAGGCTGCTTATCTGTAGTAACAACTGG +
Preference number: 2 (lower is better)
Translates to: WDQVTVFMRFIKYMV*FLESVRLLICSNNW
Trigger: CCAGTTGTTACTACAGATAAGCAGCCTCACACTCTCCAGGAACAACACCATGTACTTTATAAATCTCATGAAAACAGTAACTTGGTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp TTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGCTACTCTTAAGAGATGCGTCTTaGTCAAACAGCAACCTCATT +
Preference number: 2 (lower is better)
Translates to: FGFLCWYTSSMSSGSMLLLRDAS*SNSNLI
Trigger: AATGAGGTTGCTGTTTGATCAAGACGCATCTCTTAA...GAGTAGCATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR GCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTTCTCAGGAGAAGGCATaGCTTTGCACATTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLSQEKA*LCTFLL
Trigger: CAAGAGGAATGTGCAAAGGCATGCCTTCTCCTGAGA...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR GCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTATTTATTGTATCTTGTTaGCCAGATCCAGAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: GASSETYLKSSFPRYVTLFIVSC*PDPEEE
Trigger: CTCTTCCTCTGGATCTGGGCAACAAGATACAATAAA...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGTTTAGAACTGAACTTTaGTTTCTTGTGTTGGTACAC +
Preference number: 2 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQFRTEL*FLVLVH
Trigger: GTGTACCAACACAAGAAACCAAAGTTCAGTTCTAAA...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTAGAAAGTGAACCTGATTaGGGATGCTCTAAATTTTCC +
Preference number: 2 (lower is better)
Translates to: GASSETYLKSSFPRYVTLESEPD*GCSKFS
Trigger: GGAAAATTTAGAGCATCCCCAATCAGGTTCACTTTC...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 90 bp GTTTTTCTTCTTCCTATACCTTTTGGTACGTTTGTGTTGGGATCTTaGACGTTATGGAGATTGCCCTTTCTGAGTCCTGTAGAGTATATC +
Preference number: 2 (lower is better)
Translates to: VFLLPIPFGTFVLGS*TLWRLPFLSPVEYI
Trigger: GATATACTCTACAGGACTCAGAAAGGGCAATCTCCATAACGTCAAAGATCCCAACACAAACGTACCAAAAGGTATAGGAAGAAGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTTTGTGTTGGGATCTTTaGCGTTATGGAGATTGCCCT +
Preference number: 2 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLLCWDL*RYGDCP
Trigger: AGGGCAATCTCCATAACGTCAAAGATCCCAACACAA...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR TCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTAATGATTAGTCAACTTTaGAGCCTCATGTGTCAAAAG +
Preference number: 2 (lower is better)
Translates to: GASSETYLKSSFPRYVTLMISQL*SLMCQK
Trigger: CTTTTGACACATGAGGCTTCAAAGTTGACTAATCAT...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR GCA 90 bp TTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGCTACTCCTCAGATTTAAGAGATaGGTCTTGATCAAACAGCAA +
Preference number: 2 (lower is better)
Translates to: FGFLCWYTSSMSSGSMLLLRFKR*VLIKQQ
Trigger: TTGCTGTTTGATCAAGACGCATCTCTTAAATCTGAG...GAGTAGCATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR GCA 90 bp TTCTTCTGGAAGGTCATTATGAGTTTCTGGAATATGCTGCTGATAGGTAACCAAACTAGCTTCATGAAGTaGTGTCCAACCAGCATAACT +
Preference number: 2 (lower is better)
Translates to: FFWKVIMSFWNMLLIGNQTSFMK*CPTSIT
Trigger: AGTTATGCTGGTTGGACAGCACTTCATGAAGCTAGT...TTGGTTACCTATCAGCAGCATATTCCAGAAACTCATAATGACCTTCCAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 90 bp CCATTCATCACTGCATCATGTAGGGGAGTAATCTGGTATAATCCTTaGATATTTACATCTGCTCCACCTTTTAATAGTTCACTTGCTGTC +
Preference number: 2 (lower is better)
Translates to: PFITASCRGVIWYNP*IFTSAPPFNSSLAV
Trigger: GACAGCAAGTGAACTATTAAAAGGTGGAGCAGATGTAAATATCAAAGGATTATACCAGATTACTCCCCTACATGATGCAGTGATGAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR GCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGATTAAAGCCGGATCCTaGATTCTTCAATATTTTGGT +
Preference number: 2 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMIKAGS*ILQYFG
Trigger: ACCAAAATATTGAAGAATGCAGGATCCGGCTTTAAT...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTCCAACCAGCATAACTTaGCTGATTAACATTTCCACC +
Preference number: 2 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLPTSIT*LINIST
Trigger: GGTGGAAATGTTAATCAGCCAAGTTATGCTGGTTGG...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 90 bp TCTCTTGATCTTTCTTGGTGTGAAAGGGAAGATGAGTCAATAGTTTaGCCATCATCACAAAAACACTGTTTATGTCTTTTAGACCGGACA +
Preference number: 2 (lower is better)
Translates to: SLDLSWCEREDESIV*PSSQKHCLCLLDRT
Trigger: TGTCCGGTCTAAAAGACATAAACAGTGTTTTTGTGATGATGGCAAAACTATTGACTCATCTTCCCTTTCACACCAAGAAAGATCAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR GCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTAACAAGCCTCAGTACTaGTATCTAATCCATTTCTCA +
Preference number: 2 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLNKPQY*YLIHFS
Trigger: TGAGAAATGGATTAGATAGCAGTACTGAGGCTTGTT...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTTTCACACAATTCTTCTaGAAGGTCATTATGAGTTTC +
Preference number: 2 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLFTQFF*KVIMSF
Trigger: GAAACTCATAATGACCTTCCAGAAGAATTGTGTGAA...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CCA 72 bp TCTCCACTCAAAACTCTGACCCCCTCAGAGGGCACCTaGGCCGCCCTGGCGCGAGGGTTCAGGCACTGTGGC +
Preference number: 3 (lower is better)
Translates to: SPLKTLTPSEGT*AALARGFRHCG
Trigger: GCCACAGTGCCTGAACCCTCGCGCCAGGGCGGCCCAGGTGCCCTCTGAGGGGGTCAGAGTTTTGAGTGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR TCA 72 bp AGCACATGTTCTGGTCACGATCTCCACTCAAAACTCTaGCCCCCTCAGAGGGCACCTGGGCCGCCCTGGCGC +
Preference number: 3 (lower is better)
Translates to: STCSGHDLHSKL*PPQRAPGPPWR
Trigger: GCGCCAGGGCGGCCCAGGTGCCCTCTGAGGGGGTCAGAGTTTTGAGTGGAGATCGTGACCAGAACATGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CCA 72 bp CCACAAGGCTCTGATCCTGCCCACAAGCACATGTTCTaGTCACGATCTCCACTCAAAACTCTGACCCCCTCA +
Preference number: 3 (lower is better)
Translates to: PQGSDPAHKHMF*SRSPLKTLTPS
Trigger: TGAGGGGGTCAGAGTTTTGAGTGGAGATCGTGACCAGAACATGTGCTTGTGGGCAGGATCAGAGCCTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR TCA 72 bp CTATCAGGGCTTTCACTAGGGGCAGATTTCCTCTTCTaGCAGCTAAATGAAGCTGGCTTTCCCCTCTGGCAT +
Preference number: 3 (lower is better)
Translates to: LSGLSLGADFLF*QLNEAGFPLWH
Trigger: ATGCCAGAGGGGAAAGCCAGCTTCATTTAGCTGTCAGAAGAGGAAATCTGCCCCTAGTGAAAGCCCTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR TCA 72 bp TTCACTAGGGGCAGATTTCCTCTTCTGACAGCTAAATaGAGCTGGCTTTCCCCTCTGGCATTCCTCTTGTTG +
Preference number: 3 (lower is better)
Translates to: FTRGRFPLLTAK*SWLSPLAFLLL
Trigger: CAACAAGAGGAATGCCAGAGGGGAAAGCCAGCTTCATTTAGCTGTCAGAAGAGGAAATCTGCCCCTAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTTTTATCCCTAGCTGGTaGGGGGTAGGTGGGAACAGA +
Preference number: 3 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFFIPSW*GVGGNR
Trigger: TCTGTTCCCACCTACCCCCAACCAGCTAGGGATAAA...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGTTGACGTTATGGAGATaGCCCTTTCTGAGTCCTGTA +
Preference number: 3 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQLTLWR*PFLSPV
Trigger: TACAGGACTCAGAAAGGGCAATCTCCATAACGTCAA...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR TCA 72 bp GTATCTTGTTGCCCAGATCCAGAGGAAGAGGAGATCTaGCTGTCATCTGCACATGGAACAACAGAAACTGAT +
Preference number: 3 (lower is better)
Translates to: VSCCPDPEEEEI*LSSAHGTTETD
Trigger: ATCAGTTTCTGTTGTTCCATGTGCAGATGACAGTCAGATCTCCTCTTCCTCTGGATCTGGGCAACAAGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGTTTAAGAGATGCGTCTaGATCAAACAGCAACCTCAT +
Preference number: 3 (lower is better)
Translates to: SSDALYHCLRQQSLDVPEFKRCV*IKQQPH
Trigger: ATGAGGTTGCTGTTTGATCAAGACGCATCTCTTAAA...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGTTCTTCCTATACCTTTaGGTACGTTTGTGTTGGGAT +
Preference number: 3 (lower is better)
Translates to: SSDALYHCLRQQSLDVPEFFLYL*VRLCWD
Trigger: ATCCCAACACAAACGTACCAAAAGGTATAGGAAGAA...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR TCA 72 bp GGATGCAGACTGAACTCAGATTTAAGAGATGCGTCTTaGTCAAACAGCAACCTCATTTTATCCCTAGCTGGT +
Preference number: 3 (lower is better)
Translates to: GCRLNSDLRDAS*SNSNLILSLAG
Trigger: ACCAGCTAGGGATAAAATGAGGTTGCTGTTTGATCAAGACGCATCTCTTAAATCTGAGTTCAGTCTGCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CCA 72 bp CCTTTTGGTACGTTTGTGTTGGGATCTTTGACGTTATaGAGATTGCCCTTTCTGAGTCCTGTAGAGTATATC +
Preference number: 3 (lower is better)
Translates to: PFGTFVLGSLTL*RLPFLSPVEYI
Trigger: GATATACTCTACAGGACTCAGAAAGGGCAATCTCCATAACGTCAAAGATCCCAACACAAACGTACCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp TTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGCTACTCGGGAACAGACTGTGTTaGCTTATTTACAAGCTCTCA +
Preference number: 3 (lower is better)
Translates to: FGFLCWYTSSMSSGSMLLGNRLC*LIYKLS
Trigger: TGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCC...GAGTAGCATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTACTGAACTTTGGTTTCTaGTGTTGGTACACATCCTCT +
Preference number: 3 (lower is better)
Translates to: GASSETYLKSSFPRYVTLLNFGF*CWYTSS
Trigger: AGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGCAGCTAGTATCTTTCTaGGATTACAGTCTACATCAT +
Preference number: 3 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQQLVSF*DYSLHH
Trigger: ATGATGTAGACTGTAATCCAAGAAAGATACTAGCTG...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGGATGAGTCAATAGTTTaGCCATCATCACAAAAACAC +
Preference number: 3 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQDESIV*PSSQKH
Trigger: GTGTTTTTGTGATGATGGCAAAACTATTGACTCATC...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCACAGAAAGGCTTTCTCTaGATCTTTCTTGGTGTGAAA +
Preference number: 3 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPQKGFL*IFLGVK
Trigger: TTTCACACCAAGAAAGATCAAGAGAAAGCCTTTCTG...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCAGAGCTTAAATCCAAGTaGAATCTCAGGAGAAGGCAT +
Preference number: 3 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASELKSK*NLRRRH
Trigger: ATGCCTTCTCCTGAGATTCAACTTGGATTTAAGCTC...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTAGTCTACATCATCTACTaGGGTCCTTTTATGTTGTGT +
Preference number: 3 (lower is better)
Translates to: GASSETYLKSSFPRYVTLVYIIY*GPFMLC
Trigger: ACACAACATAAAAGGACCCAAGTAGATGATGTAGAC...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCACAGTGTCACAATTCTTaGCCATCTTTTCCACAATAT +
Preference number: 3 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPQCHNS*PSFPQY
Trigger: ATATTGTGGAAAAGATGGCAAAGAATTGTGACACTG...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTATTTTATTGTATCTTGTaGCCCAGATCCAGAGGAAGA +
Preference number: 3 (lower is better)
Translates to: GASSETYLKSSFPRYVTLFYCIL*PRSRGR
Trigger: TCTTCCTCTGGATCTGGGCAACAAGATACAATAAAA...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR GCA 72 bp TGTATCAGGATGCAGACTGAACTCAGATTTAAGAGATaGGTCTTGATCAAACAGCAACCTCATTTTATCCCT +
Preference number: 3 (lower is better)
Translates to: CIRMQTELRFKR*VLIKQQPHFIP
Trigger: AGGGATAAAATGAGGTTGCTGTTTGATCAAGACGCATCTCTTAAATCTGAGTTCAGTCTGCATCCTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR-3UTR CAA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTTTTGGTACGTTTGTGTaGGGATCTTTGACGTTATGG +
Preference number: 3 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLFGTFV*GSLTLW
Trigger: CCATAACGTCAAAGATCCCAACACAAACGTACCAAA...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CCA 72 bp TATATCTCTCAAGGAGACGCTTCATACATAAATCCTTaGCCTCATCCAAAGCACATTTTCCATCATCATTTC +
Preference number: 3 (lower is better)
Translates to: YISQGDASYINP*PHPKHIFHHHF
Trigger: GAAATGATGATGGAAAATGTGCTTTGGATGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR TCA 72 bp ACAATTATATCAATAGATCCTTCATTAGATGCCTCATaGAGTGGTGTCCAACCTGCATTATCATTTAGATTC +
Preference number: 3 (lower is better)
Translates to: TIISIDPSLDAS*SGVQPALSFRF
Trigger: GAATCTAAATGATAATGCAGGTTGGACACCACTTCATGAGGCATCTAATGAAGGATCTATTGATATAATTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR TCA 72 bp TTTGTCTGTAGCTTCTGTAAGATCATTCTCTTTCTGTaGATATTCTGTTTGACCAATAAAAGCAACAGGTTG +
Preference number: 3 (lower is better)
Translates to: FVCSFCKIILFL*IFCLTNKSNRL
Trigger: CAACCTGTTGCTTTTATTGGTCAAACAGAATATTCACAGAAAGAGAATGATCTTACAGAAGCTACAGACAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR GCA 72 bp CCTGTAGAGTATATCTGGTCAAGAGTTGATTGTTTATaGTTGGATTTACCAAATTTTGTGTTTTTGGGATCT +
Preference number: 3 (lower is better)
Translates to: PVEYIWSRVDCL*LDLPNFVFLGS
Trigger: AGATCCCAAAAACACAAAATTTGGTAAATCCAAGCATAAACAATCAACTCTTGACCAGATATACTCTACAGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCATTGTCGCAGGGCTGCTaGGGAGGACGCAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPLSQGC*GGRRRP
Trigger: CGGCCGCCTGCGTCCTCCTCAGCAGCCCTGCGACAA...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp GGTGGGAACAGACTGTGTTTGCTTATTTACAAGCTCTCAGCTCAGGCACGGCTGTGCCCCACAAGGCTCTaGTCCTGCCCACAAGCACAT +
Preference number: 4 (lower is better)
Translates to: GGNRLCLLIYKLSAQARLCPTRL*SCPQAH
Trigger: ATGTGCTTGTGGGCAGGATCAGAGCCTTGTGGGGCA...CAGCCGTGCCTGAGCTGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp GGTGGGAACAGACTGTGTTTGCTTATTTACAAGCTCTCAGCTCAGGCACGGCTGTCCCAGTCTGGGGCCTaGACGCCTTCCTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: GGNRLCLLIYKLSAQARLSQSGA*TPSSIF
Trigger: AAAGATGGAGGAAGGCGTCCAGGCCCCAGACTGGGA...CAGCCGTGCCTGAGCTGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTAGCACCTGGGCCGCCCTaGCGCGAGGGTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: GASSETYLKSSFPRYVTLAPGPP*REGSGT
Trigger: AGTGCCTGAACCCTCGCGCCAGGGCGGCCCAGGTGC...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp GGTGGGAACAGACTGTGTTTGCTTATTTACAAGCTCTCAGCTCAGGCACGGCTGGCCCCTGTAGGTGATTaGTGGGAACTTGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GGNRLCLLIYKLSAQARLAPVGD*WELVFL
Trigger: CAGAAAAACAAGTTCCCAGCAATCACCTACAGGGGC...CAGCCGTGCCTGAGCTGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp GGTGGGAACAGACTGTGTTTGCTTATTTACAAGCTCTCAGCTCAGGCACGGCTGGGCTCCATGCTTAAATaGCTCTATGGATACCCTGTA +
Preference number: 4 (lower is better)
Translates to: GGNRLCLLIYKLSAQARLGSMLK*LYGYPV
Trigger: TACAGGGTATCCATAGAGTCATTTAAGCATGGAGCC...CAGCCGTGCCTGAGCTGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGCTCCACTCAAAACTCTaGCCCCCTCAGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMLHSKL*PPQRAP
Trigger: AGGTGCCCTCTGAGGGGGTCAGAGTTTTGAGTGGAG...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp GGTGGGAACAGACTGTGTTTGCTTATTTACAAGCTCTCAGCTCAGGCACGGCTGTGTCTAGTGGGTCAATaGTACTCCTTTGAGCTGATG +
Preference number: 4 (lower is better)
Translates to: GGNRLCLLIYKLSAQARLCLVGQ*YSFELM
Trigger: CATCAGCTCAAAGGAGTAGCATTGACCCACTAGACA...CAGCCGTGCCTGAGCTGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp GGTGGGAACAGACTGTGTTTGCTTATTTACAAGCTCTCAGCTCAGGCACGGCTGCTTGAGCCAGGTGACTaGGTTTTTATAAATCTGACC +
Preference number: 4 (lower is better)
Translates to: GGNRLCLLIYKLSAQARLLEPGD*VFINLT
Trigger: GGTCAGATTTATAAAAACCCAGTCACCTGGCTCAAG...CAGCCGTGCCTGAGCTGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp GGTGGGAACAGACTGTGTTTGCTTATTTACAAGCTCTCAGCTCAGGCACGGCTGATATTGCTGAGGTACTaGGTTTGGTTCTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: GGNRLCLLIYKLSAQARLILLRY*VWFWKY
Trigger: ATACTTCCAGAACCAAACTCAGTACCTCAGCAATAT...CAGCCGTGCCTGAGCTGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGCAAAACTTCCAATGCTaGTCCATTATGTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: SSDALYHCLRQQSLDVPEQNFQC*SIMWHG
Trigger: CCCATGCCACATAATGGATCAGCATTGGAAGTTTTG...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGTCTCAGGAGAAGGCATaGCTTTGCACATTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQSQEKA*LCTFLL
Trigger: CAAGAGGAATGTGCAAAGGCATGCCTTCTCCTGAGA...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTATCACTGTCCCAGTCTaGGGCCTGGACGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLITVPV*GLDAFL
Trigger: GAGGAAGGCGTCCAGGCCCCAGACTGGGACAGTGAT...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGCACAAGCACATGTTCTaGTCACGATCTCCACTCAAA +
Preference number: 4 (lower is better)
Translates to: SSDALYHCLRQQSLDVPEHKHMF*SRSPLK
Trigger: TTTGAGTGGAGATCGTGACCAGAACATGTGCTTGTG...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp GCCACAACTAAAAGGCTCTTCTGTCTTGCAGCCAAGTaGGCCAATTGTTCTCTCAGGGCTCCATGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: ATTKRLFCLAAK*ANCSLRAPCLN
Trigger: ATTTAAGCATGGAGCCCTGAGAGAACAATTGGCCAACTTGGCTGCAAGACAGAAGAGCCTTTTAGTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCAGTCGCTCTCCGTCACTaGACCCTCTATCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASVALRH*TLYHSF
Trigger: GAAACTGTGATAGAGGGTTCAGTGACGGAGAGCGAC...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGTTGTGTTGGGATCTTTaGCGTTATGGAGATTGCCCT +
Preference number: 4 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQLCWDL*RYGDCP
Trigger: AGGGCAATCTCCATAACGTCAAAGATCCCAACACAA...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGCTTCTGACAGCTAAATaGAGCTGGCTTTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMLLTAK*SWLSPL
Trigger: CAGAGGGGAAAGCCAGCTTCATTTAGCTGTCAGAAG...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGATGGCACTGAGGGTCTaGTGCACAGAAAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMMALRV*CTERLS
Trigger: AGAAAGCCTTTCTGTGCATCAGACCCTCAGTGCCAT...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGAGATATGGTTTCATCTaGTGCACTGTATCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SSDALYHCLRQQSLDVPERYGFI*CTVSLP
Trigger: AGGCAGTGATACAGTGCATCAGATGAAACCATATCT...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTAGAGGAAGAGGAGATCTaGCTGTCATCTGCACATGGA +
Preference number: 4 (lower is better)
Translates to: GASSETYLKSSFPRYVTLEEEEI*LSSAHG
Trigger: TCCATGTGCAGATGACAGTCAGATCTCCTCTTCCTC...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTAGTCTTGCAGCCAAGTTaGCCAATTGTTCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GASSETYLKSSFPRYVTLVLQPS*PIVLSG
Trigger: CCCTGAGAGAACAATTGGCCAACTTGGCTGCAAGAC...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTATCATTAGATGCCTCATaGAGTGGTGTCCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: GASSETYLKSSFPRYVTLSLDAS*SGVQPA
Trigger: TGCAGGTTGGACACCACTTCATGAGGCATCTAATGA...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGTTCACTAGAGATTTCTaGTCTGGGTGGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMFTRDF*SGWELP
Trigger: AGGAAGCTCCCACCCAGATCAGAAATCTCTAGTGAA...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGTTAAGAGATGCGTCTTaGTCAAACAGCAACCTCATT +
Preference number: 4 (lower is better)
Translates to: SSDALYHCLRQQSLDVPELRDAS*SNSNLI
Trigger: AATGAGGTTGCTGTTTGATCAAGACGCATCTCTTAA...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGGCCTTCCTCCATCTTTaGCTCACATTCAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQAFLHL*LTFKVF
Trigger: AAAGACTTTGAATGTGAGGCAAAGATGGAGGAAGGC...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGGTAGATAACGTGGGCTaGTTTGCATTGACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMVDNVG*FALTLW
Trigger: CCAGAGAGTCAATGCAAAGCAGCCCACGTTATCTAC...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCAAATGAAAGTCCAGACTaGCGAAACGACCCAATGAAC +
Preference number: 4 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPNESPD*RNDPMN
Trigger: GTTCATTGGGTCGTTTCGCCAGTCTGGACTTTCATT...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp GGTGGGAACAGACTGTGTTTGCTTATTTACAAGCTCTCAGCTCAGGCACGGCTGCCTGTAGAGTATATCTaGTCAAGAGTTGATTGTTTA +
Preference number: 4 (lower is better)
Translates to: GGNRLCLLIYKLSAQARLPVEYI*SRVDCL
Trigger: TAAACAATCAACTCTTGACCAGATATACTCTACAGG...CAGCCGTGCCTGAGCTGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGAGACTAGTGAGCTCTTaGCTGTCTTTTTCACTAGAG +
Preference number: 4 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQRLVSS*LSFSLE
Trigger: CTCTAGTGAAAAAGACAGCCAAGAGCTCACTAGTCT...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCACATTTTATCCCTAGCTaGTTGGGGGTAGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASHFIPS*LGVGGN
Trigger: GTTCCCACCTACCCCCAACCAGCTAGGGATAAAATG...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp CTGGAAGACAAGGTTGATATTGCTGAGGTACTGAGTTaGGTTCTGGAAGTATGGGTGCATCCTCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: LEDKVDIAEVLS*VLEVWVHPQKH
Trigger: ATGTTTCTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAACCTTGTCTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTAGCTTAAATCCAAGTTaGATCTCAGGAGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFSLNPS*ISGEGM
Trigger: CATGCCTTCTCCTGAGATTCAACTTGGATTTAAGCT...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp TTCTTCTGGAAGGTCATTATGAGTTTCTGGAATATGCTGCTGATAGGTAACCAACCTACACTAGCTTCATaGAGTGCTGTCCAACCAGCA +
Preference number: 4 (lower is better)
Translates to: FFWKVIMSFWNMLLIGNQPTLAS*SAVQPA
Trigger: TGCTGGTTGGACAGCACTTCATGAAGCTAGTGTAGG...TTGGTTACCTATCAGCAGCATATTCCAGAAACTCATAATGACCTTCCAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTTTTCTCTTTGGAAACTaGACAAGCCTCAGTACTGCT +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFFLFGN*TSLSTA
Trigger: AGCAGTACTGAGGCTTGTTCAGTTTCCAAAGAGAAA...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCATGTTCCTGGAGAGTGTaGGGCTGCTTATCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASCSWRV*GCLSVV
Trigger: TACTACAGATAAGCAGCCTCACACTCTCCAGGAACA...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTCTTCTCTGTGCCATCTaGATGTCTGGATTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFLLCAI*MSGFWK
Trigger: TTTCCAAAATCCAGACATTCAGATGGCACAGAGAAG...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGTCCCTTTCTGCTTTCTaGTTGGCAAGCACATTATCC +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMSLSAF*LASTLS
Trigger: GGATAATGTGCTTGCCAAGCAGAAAGCAGAAAGGGA...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCACAGATCATCCCTTTCTaGTTTCTGCTTGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASQIIPF*FLLGKH
Trigger: GTGCTTGCCAAGCAGAAAGCAGAAAGGGATGATCTG...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGGATGCACTGTATCACTaGCTAAGACAGCAATCCCTT +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMDALYH*LRQQSL
Trigger: AAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATC...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTTTCTGGAAGTATGGGTaGATCCTCAGAAACATACCT +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFFWKYG*ILRNIP
Trigger: AGGTATGTTTCTGAGGATGCACCCATACTTCCAGAA...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp AGGATGCAGACTGAACTCAGATTTAAGAGATGCGTCTaGATCAAACAGCAACCTCATTTTATCCCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RMQTELRFKRCV*IKQQPHFIPSW
Trigger: CCAGCTAGGGATAAAATGAGGTTGCTGTTTGATCAAGACGCATCTCTTAAATCTGAGTTCAGTCTGCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp CTTCCTATACCTTTTGGTACGTTTGTGTTGGGATCTTaGACGTTATGGAGATTGCCCTTTCTGAGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LPIPFGTFVLGS*TLWRLPFLSPV
Trigger: TACAGGACTCAGAAAGGGCAATCTCCATAACGTCAAAGATCCCAACACAAACGTACCAAAAGGTATAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGATTTTGGTGGTTCAATaGAAGTCCAGACTGGCGAAA +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMILVVQ*KSRLAK
Trigger: TTTCGCCAGTCTGGACTTTCATTGAACCACCAAAAT...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCATCAATGCTACTCCTTTaGGCTGATGTAAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPSMLLL*ADVRHF
Trigger: AAAATGCCTTACATCAGCTCAAAGGAGTAGCATTGA...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCAGGATTGCCATTTGAGTaGTCAAAAGAAGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPGLPFE*SKEGPN
Trigger: ATTTGGACCTTCTTTTGATCACTCAAATGGCAATCC...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCACTCAGGATTGCCATTTaGGTGATCAAAAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASLRIAI*VIKRRS
Trigger: GGACCTTCTTTTGATCACTCAAATGGCAATCCTGAG...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTTTGAATAGCTCCACATaGTTAGTCAACTTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFLNSST*LVNFEA
Trigger: GGCTTCAAAGTTGACTAATCATGTGGAGCTATTCAA...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCATCAGCTGCCTTTAAATaGTTGTTTGCAACAGCATCA +
Preference number: 4 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPSAAFK*LFATAS
Trigger: TGATGCTGTTGCAAACAATCATTTAAAGGCAGCTGA...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTTGGGCTGCTTTGCATTaGCTCTCTGGAAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLWAALH*LSGSSL
Trigger: CAAGGAACTTCCAGAGAGTCAATGCAAAGCAGCCCA...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGACTAGCTTCATGAAGTaGTGTCCAACCAGCATAACT +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMTSFMK*CPTSIT
Trigger: AGTTATGCTGGTTGGACAGCACTTCATGAAGCTAGT...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGGACAATTGTGTTTCCTaGATGCTTCCAGAAACAGGA +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMDNCVS*MLPETG
Trigger: TCCTGTTTCTGGAAGCATGCAGGAAACACAATTGTC...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGATTAAAGCCGGATCCTaGATTCTTCAATATTTTGGT +
Preference number: 4 (lower is better)
Translates to: SSDALYHCLRQQSLDVPEIKAGS*ILQYFG
Trigger: ACCAAAATATTGAAGAATGCAGGATCCGGCTTTAAT...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGGGATCTTTGACGTTATaGAGATTGCCCTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMGSLTL*RLPFLS
Trigger: ACTCAGAAAGGGCAATCTCCATAACGTCAAAGATCC...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCAATCTGTTTATTCTCCTaGAAGGAGAGACAGCTAGTA +
Preference number: 4 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPICLFS*KERQLV
Trigger: TACTAGCTGTCTCTCCTTCCAGGAGAATAAACAGAT...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCATGCCATCTGAATGTCTaGATTTTGGAAAACCATCCA +
Preference number: 4 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPCHLNV*ILENHP
Trigger: TGGATGGTTTTCCAAAATCCAGACATTCAGATGGCA...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTCCTGTAGGTGATTGCTaGGAACTTGTTTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFPVGDC*ELVFLF
Trigger: AAACAGAAAAACAAGTTCCCAGCAATCACCTACAGG...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTAAAATACTGGCTTTGTaGGTAGTCTCCTGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFKILAL*VVSCVL
Trigger: CAAAACACAGGAGACTACCCACAAAGCCAGTATTTT...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGTTGGTTCTGGAAGTATaGGTGCATCCTCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMLVLEV*VHPQKH
Trigger: ATGTTTCTGAGGATGCACCCATACTTCCAGAACCAA...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCATCTGGAAGGTCATTATaGGTTTCTGGAATATGCTGC +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASSGRSL*VSGICC
Trigger: GCAGCATATTCCAGAAACTCATAATGACCTTCCAGA...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTACTAAGACAAGGCAATaGTGTAACATTCCTACAGTT +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFTKTRQ*CNIPTV
Trigger: AACTGTAGGAATGTTACATCATTGCCTTGTCTTAGT...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCACGTTCTGTTTCATCTTaGGACTGCTGTAATATTGTA +
Preference number: 4 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPRSVSS*DCCNIV
Trigger: TACAATATTACAGCAGTCTCAAGATGAAACAGAACG...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCACCAACCAGCATAACTTaGCTGATTAACATTTCCACC +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASPTSIT*LINIST
Trigger: GGTGGAAATGTTAATCAGCCAAGTTATGCTGGTTGG...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTTCATACATAAATCCTTaGCCTCATCCAAAGCACATT +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFSYINP*PHPKHI
Trigger: AATGTGCTTTGGATGAGGCCAAGGATTTATGTATGA...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTGTCATTATGAGTTTCTaGAATATGCTGCTGATAGGT +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFVIMSF*NMLLIG
Trigger: ACCTATCAGCAGCATATTCCAGAAACTCATAATGAC...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTGAAACAGCTTCAGTTTaGTCAACAGATTCTAATTCC +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFETASV*STDSNS
Trigger: GGAATTAGAATCTGTTGACCAAACTGAAGCTGTTTC...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGGAAAGTGAACCTGATTaGGGATGCTCTAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMESEPD*GCSKFS
Trigger: GGAAAATTTAGAGCATCCCCAATCAGGTTCACTTTC...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGTCTGGTATAATCCTTTaGTATTTACATCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMSGIIL*YLHLLH
Trigger: GTGGAGCAGATGTAAATATCAAAGGATTATACCAGA...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCAGAAGTGTGGTTAGGCTaGCTGCTTTTAACTCATTTT +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASEVWLG*LLLTHF
Trigger: AAAATGAGTTAAAAGCAGTCAGCCTAACCACACTTC...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTTGGCATTCCTCTTGTTaGTCCTACCTGCTTTCATTC +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLWHSSC*SYLLSF
Trigger: GAATGAAAGCAGGTAGGATCAACAAGAGGAATGCCA...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTGAGAAGGCATGCCTTTaGACATTCCTCTTGTATCAG +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLEKACL*TFLLYQ
Trigger: CTGATACAAGAGGAATGTGCAAAGGCATGCCTTCTC...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp TTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGCTACTCAACAAGCCTCAGTACTaGTATCTAATCCATTTCTCA +
Preference number: 4 (lower is better)
Translates to: FGFLCWYTSSMSSGSMLLNKPQY*YLIHFS
Trigger: TGAGAAATGGATTAGATAGCAGTACTGAGGCTTGTT...GAGTAGCATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp TTCTTCTGGAAGGTCATTATGAGTTTCTGGAATATGCTGCTGATAGGTAACCAACTTGTTGATCCTACCTaGTTTCATTCCTGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: FFWKVIMSFWNMLLIGNQLVDPT*FHSWFV
Trigger: CACAAACCAGGAATGAAAGCAGGTAGGATCAACAAG...TTGGTTACCTATCAGCAGCATATTCCAGAAACTCATAATGACCTTCCAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTTTCTGTTTCCTCTTTTaGGATCATAATTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFFCFLF*DHNWKG
Trigger: ACCTTTCCAATTATGATCCCAAAAGAGGAAACAGAA...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp CTGAACTTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGATCCATTATGTGGCATaGGAGAAATTCTTGATCACT +
Preference number: 4 (lower is better)
Translates to: LNFGFLCWYTSSMSSGSMIHYVA*EKFLIT
Trigger: AGTGATCAAGAATTTCTCCCATGCCACATAATGGAT...CATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp GTTTTTCTTCTTCCTATACCTTTTGGTACGTTTGTGTaGGGATCTTTGACGTTATGGAGATTGCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VFLLPIPFGTFV*GSLTLWRLPFL
Trigger: CAGAAAGGGCAATCTCCATAACGTCAAAGATCCCAACACAAACGTACCAAAAGGTATAGGAAGAAGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp TTATTCTCCTGGAAGGAGAGACAGCTAGTATCTTTCTaGGATTACAGTCTACATCATCTACTTGGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LFSWKERQLVSF*DYSLHHLLGSF
Trigger: AAAGGACCCAAGTAGATGATGTAGACTGTAATCCAAGAAAGATACTAGCTGTCTCTCCTTCCAGGAGAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCAATGATTAGTCAACTTTaGAGCCTCATGTGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASMISQL*SLMCQK
Trigger: CTTTTGACACATGAGGCTTCAAAGTTGACTAATCAT...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTAGATCCTTCATTAGATaGCTCATGAAGTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLRSFIR*LMKWCP
Trigger: TGGACACCACTTCATGAGGCATCTAATGAAGGATCT...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTTCTCTCAGGGCTCCATaGTTAAATGACTCTATGGAT +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLSLRAP*LNDSMD
Trigger: ATCCATAGAGTCATTTAAGCATGGAGCCCTGAGAGA...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTGATCTGACTGTCATCTaGACATGGAACAACAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLDLTVI*TWNNRN
Trigger: GTTTCTGTTGTTCCATGTGCAGATGACAGTCAGATC...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCATTGACAGAGTTAAGCTaGAAGGTTCACACAATTCTT +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASLTELS*KVHTIL
Trigger: AAGAATTGTGTGAACCTTCCAGCTTAACTCTGTCAA...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp TTCTTCTGGAAGGTCATTATGAGTTTCTGGAATATGCTGCTGATAGGTAACCAAAAAAAGTTGGTGCTCTaGGAATATAATCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: FFWKVIMSFWNMLLIGNQKKLVL*EYNPVA
Trigger: AGCCACAGGATTATATTCCCAGAGCACCAACTTTTT...TTGGTTACCTATCAGCAGCATATTCCAGAAACTCATAATGACCTTCCAGAAGAA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp TCATACAAGCCAGGGAATTTTGCTCAGGATTGCCATTaGAGTGATCAAAAGAAGGTCCAAATATGCATTGTT +
Preference number: 4 (lower is better)
Translates to: SYKPGNFAQDCH*SDQKKVQICIV
Trigger: AACAATGCATATTTGGACCTTCTTTTGATCACTCAAATGGCAATCCTGAGCAAAATTCCCTGGCTTGTATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp TATTTGATGGATGGGCAGCATTTTCGGCAAGGACACTaGCAGTTTCTGAAATATTTAATTTGCCGATTACTG +
Preference number: 4 (lower is better)
Translates to: YLMDGQHFRQGH*QFLKYLICRLL
Trigger: CAGTAATCGGCAAATTAAATATTTCAGAAACTGCAAGTGTCCTTGCCGAAAATGCTGCCCATCCATCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR TCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTCTCCGGTTAATGCTATaGAGAGATATTTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLLRLML*RDILFT
Trigger: GGTGAACAAAATATCTCTTCATAGCATTAACCGGAG...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTTTTATTGTATCTTGTTaGCCAGATCCAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLFIVSC*PDPEEE
Trigger: CTCTTCCTCTGGATCTGGGCAACAAGATACAATAAA...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCATTTAGAACTGAACTTTaGTTTCTTGTGTTGGTACAC +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASFRTEL*FLVLVH
Trigger: GTGTACCAACACAAGAAACCAAAGTTCAGTTCTAAA...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTTCTTCCTATACCTTTTaGTACGTTTGTGTTGGGATC +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLSSYTF*YVCVGI
Trigger: GATCCCAACACAAACGTACCAAAAGGTATAGGAAGA...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCATTTTGGGATCATAATTaGAAAGGTCCTGATCACAAA +
Preference number: 4 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASFWDHN*KGPDHK
Trigger: TTTGTGATCAGGACCTTTCCAATTATGATCCCAAAA...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp ATATATCTCTCAAGGAGACGCTTCATACATAAATCCTaGGCCTCATCCAAAGCACATTTTCCATCATCATTT +
Preference number: 4 (lower is better)
Translates to: IYLSRRRFIHKS*ASSKAHFPSSF
Trigger: AAATGATGATGGAAAATGTGCTTTGGATGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp ATTTATTCTTCTCTGTGCCATCTGAATGTCTGGATTTaGGAAAACCATCCAAGGTACAATCACTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: IYSSLCHLNVWI*ENHPRYNHCHF
Trigger: AAAATGGCAGTGATTGTACCTTGGATGGTTTTCCAAAATCCAGACATTCAGATGGCACAGAGAAGAATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR GCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTCTCAGATTTAAGAGATaGGTCTTGATCAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLLRFKR*VLIKQQ
Trigger: TTGCTGTTTGATCAAGACGCATCTCTTAAATCTGAG...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTTTTGGTTTCTTGTGTTaGTACACATCCTCTATGTCT +
Preference number: 4 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLFGFLC*YTSSMS
Trigger: AGACATAGAGGATGTGTACCAACACAAGAAACCAAA...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CCA 90 bp TTCTTCTGGAAGGTCATTATGAGTTTCTGGAATATGCTGCTGATAGGTAACCAATTCACACAATTCTTCTaGAAGGTCATTATGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FFWKVIMSFWNMLLIGNQFTQFF*KVIMSF
Trigger: GAAACTCATAATGACCTTCCAGAAGAATTGTGTGAA...TTGGTTACCTATCAGCAGCATATTCCAGAAACTCATAATGACCTTCCAGAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp ACTGCATCATGTAGGGGAGTAATCTGGTATAATCCTTaGATATTTACATCTGCTCCACCTTTTAATAGTTCA +
Preference number: 4 (lower is better)
Translates to: TASCRGVIWYNP*IFTSAPPFNSS
Trigger: TGAACTATTAAAAGGTGGAGCAGATGTAAATATCAAAGGATTATACCAGATTACTCCCCTACATGATGCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp CTCTGTCAATGTAATTCCTCTCAGTGTCACAATTCTTaGCCATCTTTTCCACAATATGTGTATCTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: LCQCNSSQCHNS*PSFPQYVYLFD
Trigger: ATCAAACAGATACACATATTGTGGAAAAGATGGCAAAGAATTGTGACACTGAGAGGAATTACATTGACAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp TCTACCTTAAGTTTACCATTCAATAAAATACTGGCTTaGTGGGTAGTCTCCTGTGTTTTGAATTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: STLSLPFNKILA*WVVSCVLNSRM
Trigger: CATTCTGGAATTCAAAACACAGGAGACTACCCACAAAGCCAGTATTTTATTGAATGGTAAACTTAAGGTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
3UTR CAA 72 bp TTTCATTTATTTGTAGATAACGTGGGCTGCTTTGCATaGACTCTCTGGAAGTTCCTTGTCCAAATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: FHLFVDNVGCFA*TLWKFLVQILF
Trigger: AAACAAAATTTGGACAAGGAACTTCCAGAGAGTCAATGCAAAGCAGCCCACGTTATCTACAAATAAATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS TCA 90 bp CCTTCTCCAGGGCAGCTCCTTTTCTTCCAGGTCGCTCTCCGTCACTaGACCCTCTATCACAGTTTCATCACTGTCCCAGTCTGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PSPGQLLFFQVALRH*TLYHSFITVPVWGL
Trigger: CAGGCCCCAGACTGGGACAGTGATGAAACTGTGATAGAGGGTTCAGTGACGGAGAGCGACCTGGAAGAAAAGGAGCTGCCCTGGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274361.3
ENST00000506364.6
ENST00000674120.1
CDS-3UTR CAA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGAGCCAAGTTGGCCAATaGTTCTCTCAGGGCTCCATG +
Preference number: 5 (lower is better)
Translates to: SSDALYHCLRQQSLDVPESQVGQ*FSQGSM
Trigger: CATGGAGCCCTGAGAGAACAATTGGCCAACTTGGCT...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCACCTCCCAGAAGATCCTaGAGCCAGGTGACTGGGTTT +
Preference number: 5 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPPPRRS*SQVTGF
Trigger: AAACCCAGTCACCTGGCTCAAGGATCTTCTGGGAGG...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGTTTATCCCTAGCTGGTaGGGGGTAGGTGGGAACAGA +
Preference number: 5 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQFIPSW*GVGGNR
Trigger: TCTGTTCCCACCTACCCCCAACCAGCTAGGGATAAA...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGCGCCTTCCTCCATCTTaGCCTCACATTCAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: SSDALYHCLRQQSLDVPERLPPS*PHIQSL
Trigger: AAGACTTTGAATGTGAGGCAAAGATGGAGGAAGGCG...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GGTGGGAACAGACTGTGTTTGCTTATTTACAAGCTCTCAGCTCAGGCACGGCTGTGGATGTGTTTCTCTTaGGAAACTGAACAAGCCTCA +
Preference number: 5 (lower is better)
Translates to: GGNRLCLLIYKLSAQARLWMCFS*ETEQAS
Trigger: TGAGGCTTGTTCAGTTTCCAAAGAGAAACACATCCA...CAGCCGTGCCTGAGCTGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGTTGACGTTATGGAGATaGCCCTTTCTGAGTCCTGTA +
Preference number: 5 (lower is better)
Translates to: SSDALYHCLRQQSLDVPELTLWR*PFLSPV
Trigger: TACAGGACTCAGAAAGGGCAATCTCCATAACGTCAA...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp TCATCTGATGCACTGTATCACTGCCTAAGACAGCAATCCCTTGATGTGCCAGAGTTTGTGTTGGGATCTTaGACGTTATGGAGATTGCCC +
Preference number: 5 (lower is better)
Translates to: SSDALYHCLRQQSLDVPEFVLGS*TLWRLP
Trigger: GGGCAATCTCCATAACGTCAAAGATCCCAACACAAA...CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTGTGGGCTGCTTTGCATaGACTCTCTGGAAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFVGCFA*TLWKFL
Trigger: AAGGAACTTCCAGAGAGTCAATGCAAAGCAGCCCAC...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GGTGGGAACAGACTGTGTTTGCTTATTTACAAGCTCTCAGCTCAGGCACGGCTGCAGTGTCACAATTCTTaGCCATCTTTTCCACAATAT +
Preference number: 5 (lower is better)
Translates to: GGNRLCLLIYKLSAQARLQCHNS*PSFPQY
Trigger: ATATTGTGGAAAAGATGGCAAAGAATTGTGACACTG...CAGCCGTGCCTGAGCTGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTATGTCTTGCAGCCAAGTaGGCCAATTGTTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: GASSETYLKSSFPRYVTLCLAAK*ANCSLR
Trigger: CCTGAGAGAACAATTGGCCAACTTGGCTGCAAGACA...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp TTTGGTTTCTTGTGTTGGTACACATCCTCTATGTCTAGTGGGTCAATGCTACTCGGAGAAGGCATGCCTTaGCACATTCCTCTTGTATCA +
Preference number: 5 (lower is better)
Translates to: FGFLCWYTSSMSSGSMLLGEGMP*HIPLVS
Trigger: TGATACAAGAGGAATGTGCAAAGGCATGCCTTCTCC...GAGTAGCATTGACCCACTAGACATAGAGGATGTGTACCAACACAAGAAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGGAGCTTAAATCCAAGTaGAATCTCAGGAGAAGGCAT +
Preference number: 5 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQELKSK*NLRRRH
Trigger: ATGCCTTCTCCTGAGATTCAACTTGGATTTAAGCTC...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCATTTGGTACGTTTGTGTaGGGATCTTTGACGTTATGG +
Preference number: 5 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPFGTFV*GSLTLW
Trigger: CCATAACGTCAAAGATCCCAACACAAACGTACCAAA...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp AGGCATGCCTTTGCACATTCCTCTTGTATCAGGATGCAGACTGAACTCAGATTTCTGAATGTCTGGATTTaGGAAAACCATCCAAGGTAC +
Preference number: 5 (lower is better)
Translates to: RHAFAHSSCIRMQTELRFLNVWI*ENHPRY
Trigger: GTACCTTGGATGGTTTTCCAAAATCCAGACATTCAG...AAATCTGAGTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS CCA 90 bp GATCTGAGTACTTTGCATCTCTGCTTACTTTCAGTTTTTCTAGTCTaGATGATCTCCTCAACACACACGCAGTTTCCTGATCAGAGCTAT +
Preference number: 5 (lower is better)
Translates to: DLSTLHLCLLSVFLV*MISSTHTQFPDQSY
Trigger: ATAGCTCTGATCAGGAAACTGCGTGTGTGTTGAGGAGATCATCCAGACTAGAAAAACTGAAAGTAAGCAGAGATGCAAAGTACTCAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS-3UTR CAA 90 bp GTTGATATTGCTGAGGTACTGAGTTTGGTTCTGGAAGTATGGGTGCATCCTCAGATCTGTTTTCCATTCTaGAACCTTGCTGAATGCATA +
Preference number: 5 (lower is better)
Translates to: VDIAEVLSLVLEVWVHPQICFPF*NLAECI
Trigger: TATGCATTCAGCAAGGTTCAAGAATGGAAAACAGAT...CTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCACTGGCATTCCTCTTGTaGATCCTACCTGCTTTCATT +
Preference number: 5 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASLAFLL*ILPAFI
Trigger: AATGAAAGCAGGTAGGATCAACAAGAGGAATGCCAG...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTACTTTCTGCTTTCTGCTaGGCAAGCACATTATCCATA +
Preference number: 5 (lower is better)
Translates to: GASSETYLKSSFPRYVTLLSAFC*ASTLSI
Trigger: TATGGATAATGTGCTTGCCAAGCAGAAAGCAGAAAG...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GATACGTTACCTTACTCCAAGCATAATTCCAGGTCACATAACTGTTGCCTCCCAAATAAAATACTGGCTTaGTGGGTAGTCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: DTLPYSKHNSRSHNCCLPNKILA*WVVSCV
Trigger: AACACAGGAGACTACCCACAAAGCCAGTATTTTATT...TGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTGCTGAGGTACTGAGTTaGGTTCTGGAAGTATGGGTG +
Preference number: 5 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLAEVLS*VLEVWV
Trigger: CACCCATACTTCCAGAACCAAACTCAGTACCTCAGC...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS TCA 90 bp GGGTCTTGCAGAGTCTCTGCTATTTGTGTACAATCTTCATTGGTCTaGGACGTATTGAACTCCACTTCTAAACATTCATTTCTGGCAATG +
Preference number: 5 (lower is better)
Translates to: GSCRVSAICVQSSLV*DVLNSTSKHSFLAM
Trigger: CATTGCCAGAAATGAATGTTTAGAAGTGGAGTTCAATACGTCTCAGACCAATGAAGATTGTACACAAATAGCAGAGACTCTGCAAGACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS-3UTR CAA 90 bp TTCTTCTGGAAGGTCATTATGAGTTTCTGGAATATGCTGCTGATAGGTAACCAAAGTTTCCAGAGACAATaGTGTTTCCTGCATGCTTCC +
Preference number: 5 (lower is better)
Translates to: FFWKVIMSFWNMLLIGNQSFQRQ*CFLHAS
Trigger: GGAAGCATGCAGGAAACACAATTGTCTCTGGAAACT...TTGGTTACCTATCAGCAGCATATTCCAGAAACTCATAATGACCTTCCAGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTACAAACATTGATTTGTTaGGTTCCTGTACTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: GASSETYLKSSFPRYVTLQTLIC*VPVLGH
Trigger: ATGACCCAGTACAGGAACCAAACAAATCAATGTTTG...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCATTCTTCCTATACCTTTaGGTACGTTTGTGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASFFLYL*VRLCWD
Trigger: ATCCCAACACAAACGTACCAAAAGGTATAGGAAGAA...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTATCCATTTCTCAGGCTaGACAGAGTTAAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLIHFSG*TELSWK
Trigger: CTTCCAGCTTAACTCTGTCAAGCCTGAGAAATGGAT...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTAGATGAGTCAATAGTTTaGCCATCATCACAAAAACAC +
Preference number: 5 (lower is better)
Translates to: GASSETYLKSSFPRYVTLDESIV*PSSQKH
Trigger: GTGTTTTTGTGATGATGGCAAAACTATTGACTCATC...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp GGTGCATCCTCAGAAACATACCTTAAAAGCTCCTTCCCAAGATACGTTACCTTACATCTTTTCAATGTATaGTTCTGCATCTTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: GASSETYLKSSFPRYVTLHLFNV*FCIFRV
Trigger: AACCCTGAAGATGCAGAACAATACATTGAAAAGATG...TAAGGTAACGTATCTTGGGAAGGAGCTTTTAAGGTATGTTTCTGAGGATGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCATTTTATTGTATCTTGTaGCCCAGATCCAGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASFYCIL*PRSRGR
Trigger: TCTTCCTCTGGATCTGGGCAACAAGATACAATAAAA...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp TTCTTCTGGAAGGTCATTATGAGTTTCTGGAATATGCTGCTGATAGGTAACCAAGGGAACAGACTGTGTTaGCTTATTTACAAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: FFWKVIMSFWNMLLIGNQGNRLC*LIYKLS
Trigger: TGAGAGCTTGTAAATAAGCAAACACAGTCTGTTCCC...TTGGTTACCTATCAGCAGCATATTCCAGAAACTCATAATGACCTTCCAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp TGTTTAGGGATATATCTCTCAAGGAGACGCTTCATACATAAATCCTTGGCCTCATTTAAGAGATGCGTCTaGATCAAACAGCAACCTCAT +
Preference number: 5 (lower is better)
Translates to: CLGIYLSRRRFIHKSLASFKRCV*IKQQPH
Trigger: ATGAGGTTGCTGTTTGATCAAGACGCATCTCTTAAA...TGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATATATCCCTAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS GCA 90 bp TCTTTTCTGGCATCTTATACATGTGATCTGAGTACTTTGCATCTCTaGTTACTTTCAGTTTTTCTAGTCTGGATGATCTCCTCAACACAC +
Preference number: 5 (lower is better)
Translates to: SFLASYTCDLSTLHL*LLSVFLVWMISSTH
Trigger: GTGTGTTGAGGAGATCATCCAGACTAGAAAAACTGAAAGTAAGCAGAGATGCAAAGTACTCAGATCACATGTATAAGATGCCAGAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS GCA 90 bp TTCACTTGCTGTCCGATAAAATCCTCCTACACTAGCTTCATGAAGTaGTGTCCAACCTATCATACAAAAAGATACGGCATTTGTTTACAT +
Preference number: 5 (lower is better)
Translates to: FTCCPIKSSYTSFMK*CPTYHTKRYGICLH
Trigger: ATGTAAACAAATGCCGTATCTTTTTGTATGATAGGTTGGACAGCACTTCATGAAGCTAGTGTAGGAGGATTTTATCGGACAGCAAGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504022.1
CDS-3UTR CAA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTCTGAACTTTGGTTTCTaGTGTTGGTACACATCCTCT +
Preference number: 5 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLLNFGF*CWYTSS
Trigger: AGAGGATGTGTACCAACACAAGAAACCAAAGTTCAG...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS-3UTR CAA 90 bp TTCTTCTGGAAGGTCATTATGAGTTTCTGGAATATGCTGCTGATAGGTAACCAACTCTCTGGAAGTTCCTaGTCCAAATTTTGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: FFWKVIMSFWNMLLIGNQLSGSS*SKFCFL
Trigger: GAGAAAACAAAATTTGGACAAGGAACTTCCAGAGAG...TTGGTTACCTATCAGCAGCATATTCCAGAAACTCATAATGACCTTCCAGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS TCA 90 bp AGTTTTTCTAGTCTGGATGATCTCCTCAACACACACGCAGTTTCCTaGTCAGAGCTATTTGTCACTGAATTTGAATTTCTCTTATTACTT +
Preference number: 5 (lower is better)
Translates to: SFSSLDDLLNTHAVS*SELFVTEFEFLLLL
Trigger: AAGTAATAAGAGAAATTCAAATTCAGTGACAAATAGCTCTGATCAGGAAACTGCGTGTGTGTTGAGGAGATCATCCAGACTAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS CCA 90 bp TCTTTACGATCAAAATCACTTACTAATTCAAACAATCTTTCCTCCTaGGTGCTTTCTGGTGATGTAAGTAAACTTTCTAAGGCAGACACA +
Preference number: 5 (lower is better)
Translates to: SLRSKSLTNSNNLSS*VLSGDVSKLSKADT
Trigger: TGTGTCTGCCTTAGAAAGTTTACTTACATCACCAGAAAGCACCCAGGAGGAAAGATTGTTTGAATTAGTAAGTGATTTTGATCGTAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS-3UTR CAA 90 bp AGCCTTCTCAGAGGTAGAGCAATCATCATCATCATCATTATCAGAATTTTCCTTACAAATGTTGGTATTTaGGCTGTAGTTCCAAGTTTC +
Preference number: 5 (lower is better)
Translates to: SLLRGRAIIIIIIIRIFLTNVGI*AVVPSF
Trigger: GAAACTTGGAACTACAGCCAAAATACCAACATTTGT...AAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAGAAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674120.1
CDS TCA 90 bp TCACTGAATTTGAATTTCTCTTATTACTTAGTGGCTCACAAGAAGTaGTATTTTGATGAGCCAAAGTTTGCAATCCAGATGGATTTGGGT +
Preference number: 5 (lower is better)
Translates to: SLNLNFSYYLVAHKK*YFDEPKFAIQMDLG
Trigger: ACCCAAATCCATCTGGATTGCAAACTTTGGCTCATCAAAATATCACTTCTTGTGAGCCACTAAGTAATAAGAGAAATTCAAATTCAGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS TCA 72 bp GGGCAGCTCCTTTTCTTCCAGGTCGCTCTCCGTCACTaGACCCTCTATCACAGTTTCATCACTGTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: GQLLFFQVALRH*TLYHSFITVPV
Trigger: GACTGGGACAGTGATGAAACTGTGATAGAGGGTTCAGTGACGGAGAGCGACCTGGAAGAAAAGGAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274361.3
ENST00000506364.6
ENST00000674120.1
CDS CCA 72 bp TCTATCACAGTTTCATCACTGTCCCAGTCTGGGGCCTaGACGCCTTCCTCCATCTTTGCCTCACATTCAAAG +
Preference number: 6 (lower is better)
Translates to: SITVSSLSQSGA*TPSSIFASHSK
Trigger: CTTTGAATGTGAGGCAAAGATGGAGGAAGGCGTCCAGGCCCCAGACTGGGACAGTGATGAAACTGTGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274361.3
ENST00000506364.6
ENST00000674120.1
CDS CAA 72 bp AGGATGCAGACTGAACTCAGATTTAAGAGATGCGTCTaGATCAAACAGCAACCTTCTCCAGGGCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: RMQTELRFKRCV*IKQQPSPGQLL
Trigger: AAGGAGCTGCCCTGGAGAAGGTTGCTGTTTGATCAAGACGCATCTCTTAAATCTGAGTTCAGTCTGCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS TCA 72 bp TTCAGCCTCTGGCCCTTCAATATTTTGGTGGTTCAATaGAAGTCCAGACTGGCGAAACGACCCAATGAACAT +
Preference number: 6 (lower is better)
Translates to: FSLWPFNILVVQ*KSRLAKRPNEH
Trigger: ATGTTCATTGGGTCGTTTCGCCAGTCTGGACTTTCATTGAACCACCAAAATATTGAAGGGCCAGAGGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS GCA 72 bp TGTATCAGGATGCAGACTGAACTCAGATTTAAGAGATaGGTCTTGATCAAACAGCAACCTTCTCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: CIRMQTELRFKR*VLIKQQPSPGQ
Trigger: CTGCCCTGGAGAAGGTTGCTGTTTGATCAAGACGCATCTCTTAAATCTGAGTTCAGTCTGCATCCTGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS CCA 72 bp TACCTCCCTCTTTTCTGTGACAGATGGTTTCCACCTTaGCTTCTGACAATGTGTTCAGGGCTTCCAATAACT +
Preference number: 6 (lower is better)
Translates to: YLPLFCDRWFPP*LLTMCSGLPIT
Trigger: AGTTATTGGAAGCCCTGAACACATTGTCAGAAGCCAAGGTGGAAACCATCTGTCACAGAAAAGAGGGAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS CAA 90 bp ATGTGTTCAGGGCTTCCAATAACTCAGCTGGCAATGCATCATCTTTaGCATCTTCTAGTAAATCTCTATGACATGCCGACCAGGAATTCA +
Preference number: 6 (lower is better)
Translates to: MCSGLPITQLAMHHL*HLLVNLYDMPTRNS
Trigger: TGAATTCCTGGTCGGCATGTCATAGAGATTTACTAGAAGATGCAAAAGATGATGCATTGCCAGCTGAGTTATTGGAAGCCCTGAACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS TCA 72 bp AGTCTGGATGATCTCCTCAACACACACGCAGTTTCCTaGTCAGAGCTATTTGTCACTGAATTTGAATTTCTC +
Preference number: 6 (lower is better)
Translates to: SLDDLLNTHAVS*SELFVTEFEFL
Trigger: GAGAAATTCAAATTCAGTGACAAATAGCTCTGATCAGGAAACTGCGTGTGTGTTGAGGAGATCATCCAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS CCA 72 bp ACTTTGCATCTCTGCTTACTTTCAGTTTTTCTAGTCTaGATGATCTCCTCAACACACACGCAGTTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: TLHLCLLSVFLV*MISSTHTQFPD
Trigger: ATCAGGAAACTGCGTGTGTGTTGAGGAGATCATCCAGACTAGAAAAACTGAAAGTAAGCAGAGATGCAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS CAA 90 bp TGGATGATCTCCTCAACACACACGCAGTTTCCTGATCAGAGCTATTaGTCACTGAATTTGAATTTCTCTTATTACTTAGTGGCTCACAAG +
Preference number: 6 (lower is better)
Translates to: WMISSTHTQFPDQSY*SLNLNFSYYLVAHK
Trigger: CTTGTGAGCCACTAAGTAATAAGAGAAATTCAAATTCAGTGACAAATAGCTCTGATCAGGAAACTGCGTGTGTGTTGAGGAGATCATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS TCA 72 bp ATCTCTATGACATGCCGACCAGGAATTCAAAGGTATTaGTATGGAACTAAGAGAGTCACTCAATGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: ISMTCRPGIQRY*YGTKRVTQWVH
Trigger: ATGAACCCATTGAGTGACTCTCTTAGTTCCATATCAATACCTTTGAATTCCTGGTCGGCATGTCATAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6
CDS GCA 72 bp TGTCCGATAAAATCCTCCTACACTAGCTTCATGAAGTaGTGTCCAACCTATCATACAAAAAGATACGGCATT +
Preference number: 6 (lower is better)
Translates to: CPIKSSYTSFMK*CPTYHTKRYGI
Trigger: AATGCCGTATCTTTTTGTATGATAGGTTGGACAGCACTTCATGAAGCTAGTGTAGGAGGATTTTATCGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504022.1
CDS TCA 72 bp AGAGTCTCTGCTATTTGTGTACAATCTTCATTGGTCTaGGACGTATTGAACTCCACTTCTAAACATTCATTT +
Preference number: 6 (lower is better)
Translates to: RVSAICVQSSLV*DVLNSTSKHSF
Trigger: AAATGAATGTTTAGAAGTGGAGTTCAATACGTCTCAGACCAATGAAGATTGTACACAAATAGCAGAGACTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274361.3
ENST00000506364.6