Pregenerated sensors for ANKRD30B (Homo sapiens)
Ensembl gene IDs: ENSG00000180777Ensembl transcript IDs: ENST00000358984.9, ENST00000580206.1, ENST00000665241.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGGTTCTCACATTCTCCTaGCTCAGCCTCCCGAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVVLTFS*LSLPSS Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGTGAGAAC...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR-3UTR TCA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGCCACAGTGCCCGGCCTaGAATCTTCTAATTTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVPQCPA*NLLIFH Trigger: GTGGAAAATTAGAAGATTTCAGGCCGGGCACTGTGG...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR-3UTR GCA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGTGGGAACATCTGAGCTaGTTTGAATGTTTCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVWEHLS*FECFSV Trigger: GACAGAGAAACATTCAAAGCAGCTCAGATGTTCCCA...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR-3UTR CCA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGCTGCGTAGTGTTCCATaGTGTATATGTGCCATACTT | + |
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Preference number: 2 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVLRSVP*CICAIL Trigger: AAGTATGGCACATATACACCATGGAACACTACGCAG...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTTCTGATGGGAACATCTaGGCTGCTTTTAATGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: SPNAIPPPTPQQSPECDVSDGNI*AAFNVS Trigger: AGAAACATTAAAAGCAGCTCAGATGTTCCCATCAGA...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR-3UTR GCA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCAATGATCTTGGCTCACTaGAATCTCTGCCTCATGGGT | + |
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Preference number: 2 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSMILAH*NLCLMG Trigger: ACCCATGAGGCAGAGATTGCAGTGAGCCAAGATCAT...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR-3UTR CCA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCAGTTGGACATTTGGTTTaGTTCCAAGTCTTTGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSVGHLV*FQVFAV Trigger: AACAGCAAAGACTTGGAACCAAACCAAATGTCCAAC...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR-3UTR GCA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCATTTATCAGGAGACTCTaGTTTGAATGTTTCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSFIRRL*FECFSV Trigger: GACAGAGAAACATTCAAAGCAGAGTCTCCTGATAAA...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR TCA 72 bp | GGTTTCACCATGTTAGCCAGGATGGTCTCGATCTGCTaGCCTCGTGATCCGCATGCCTCTGCCTCCCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: GFTMLARMVSIC*PRDPHASASQR Trigger: CCTTTGGGAGGCAGAGGCATGCGGATCACGAGGTCAGCAGATCGAGACCATCCTGGCTAACATGGTGAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR GCA 72 bp | CCCAGGCTGGAGTGTAGGTGCATGATCTTGGCTCACTaGAATCTCTGCCTCATGGGTTCTCACATTCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: PRLECRCMILAH*NLCLMGSHILL Trigger: CAGGAGAATGTGAGAACCCATGAGGCAGAGATTGCAGTGAGCCAAGATCATGCACCTACACTCCAGCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR-3UTR CAA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTTGTAGGTGCATGATCTaGGCTCACTGCAATCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: SPNAIPPPTPQQSPECDVCRCMI*AHCNLC Trigger: GCAGAGATTGCAGTGAGCCAAGATCATGCACCTACA...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR-3UTR CAA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGTGTTGGACATTTGGTTaGGTTCCAAGTCTTTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVCWTFG*VPSLCC Trigger: ACAGCAAAGACTTGGAACCAAACCAAATGTCCAACA...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR CCA 72 bp | TTCTTAATCCAGTCTAGCGTTGTTGGACATTTGGTTTaGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCACA | + |
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Preference number: 3 (lower is better) Translates to: FLIQSSVVGHLV*FQVFAVVNSAT Trigger: TGTGGCACTATTCACAACAGCAAAGACTTGGAACCAAACCAAATGTCCAACAACGCTAGACTGGATTAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| 3UTR-3UTR CAA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCATCCAGTCTAGCGTTGTaGGACATTTGGTTTGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSSSLAL*DIWFGS Trigger: GGAACCAAACCAAATGTCCAACAACGCTAGACTGGA...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR GCA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGGGCCCCGCACGCCCTTaGCAGCGGCAGCTAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVGPARP*QRQLRA Trigger: GGCTCTTAGCTGCCGCTGGCAAGGGCGTGCGGGGCC...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR TCA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTACAGTCCCCGGAGTGTaGTGTTCCCCTTCCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SPNAIPPPTPQQSPECDVTVPGV*CSPSCV Trigger: GACACAGGAAGGGGAACATCACACTCCGGGGACTGT...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CCA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTGATCCCCGAAGTAGATaGTCCCGTAGTCCTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SPNAIPPPTPQQSPECDVDPRSR*SRSPSQ Trigger: CTGAGAAGGACTACGGGACCATCTACTTCGGGGATC...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR TCA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGCTCTTTTGTTCAGGTTaGCGGGCTTCTTCCCTACTG | + |
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Preference number: 4 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVLFCSG*RASSLL Trigger: CAGTAGGGAAGAAGCCCGTCAACCTGAACAAAAGAG...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR TCA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGTGTTTTGCACCTCGATaGCTGCACCATAGGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVCFAPR*LHHRTA Trigger: TGCTGTCCTATGGTGCAGTCATCGAGGTGCAAAACA...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR GCA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTTTGCACCTCGATGACTaGACCATAGGACAGCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: SPNAIPPPTPQQSPECDVLHLDD*TIGQQC Trigger: ACACTGCTGTCCTATGGTGCAGTCATCGAGGTGCAA...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR GCA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTATGATCTTGGCTCACTaGAATCTCTGCCTCATGGGT | + |
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Preference number: 4 (lower is better) Translates to: SPNAIPPPTPQQSPECDVMILAH*NLCLMG Trigger: ACCCATGAGGCAGAGATTGCAGTGAGCCAAGATCAT...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR TCA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTATTCACACCTATGAGTaGGAACACGCAGTGTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SPNAIPPPTPQQSPECDVIHTYE*EHAVFG Trigger: ACCAAACACTGCGTGTTCTCACTCATAGGTGTGAAT...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR TCA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCATGTAGACCCGTTCGCTaGAGGGGTTCGGGGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSCRPVR*RGSGAP Trigger: CGGAGCCCCCGAACCCCTTCAGCGAACGGGTCTACA...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR GCA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTTGGGAACATCTGAGCTaGTTTGAATGTTTCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SPNAIPPPTPQQSPECDVWEHLS*FECFSV Trigger: GACAGAGAAACATTCAAAGCAGCTCAGATGTTCCCA...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR GCA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGTACATGTGCACAATGTaGAGGTTCCCATTAACTCGT | + |
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Preference number: 4 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVYMCTM*RFPLTR Trigger: ACGAGTTAATGGGAACCTGCACATTGTGCACATGTA...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CCA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTCTGCGTAGTGTTCCATaGTGTATATGTGCCATACTT | + |
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Preference number: 4 (lower is better) Translates to: SPNAIPPPTPQQSPECDVLRSVP*CICAIL Trigger: AAGTATGGCACATATACACCATGGAACACTACGCAG...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR GCA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATTCCACAGTTTGCTTaGTTCTTTTCTGTATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVIPQFA*FFSVWP Trigger: TGGCCATACAGAAAAGAAGCAAGCAAACTGTGGAAT...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR GCA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGTGGGAACATCTGAGCTaGTCTCAATGTTTGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVWEHLS*SQCLFI Trigger: AATGAACAAACATTGAGAGCAGCTCAGATGTTCCCA...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR GCA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTTTTATCAGGAGACTCTaGTTTGAATGTTTCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SPNAIPPPTPQQSPECDVFIRRL*FECFSV Trigger: GACAGAGAAACATTCAAAGCAGAGTCTCCTGATAAA...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR GCA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGACACGTATAATTCTGTaGAGCACTCTTAGAGATAAT | + |
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Preference number: 4 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVTRIIL*STLRDN Trigger: ATTATCTCTAAGAGTGCTGCACAGAATTATACGTGT...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CCA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTTGTAGATGTTCCTTCTaGATTGGTATTTTGAGGATT | + |
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Preference number: 4 (lower is better) Translates to: SPNAIPPPTPQQSPECDVCRCSF*IGILRI Trigger: AATCCTCAAAATACCAATCCAGAAGGAACATCTACA...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CCA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCACTAAGAGCCTCTTCATaGCTGCAGCCCCCTGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSLRASS*LQPPAR Trigger: TCTAGCAGGGGGCTGCAGCCATGAAGAGGCTCTTAG...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR TCA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCACCACAGTGCCCGGCCTaGAATCTTCTAATTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSPQCPA*NLLIFH Trigger: GTGGAAAATTAGAAGATTTCAGGCCGGGCACTGTGG...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR GCA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCATTTGGAACAGTCTTTTaGATTTCAACGGCAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSFGTVF*ISTAGL Trigger: CAAGCCTGCCGTTGAAATGCAAAAGACTGTTCCAAA...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CAA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCAGGGCCCCGCACGCCCTaGCCAGCGGCAGCTAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSGPRTP*PAAAKS Trigger: GCTCTTAGCTGCCGCTGGCAAGGGCGTGCGGGGCCC...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CAA 90 bp | GTATATCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGTGTAGGTGCATGATCTaGGCTCACTGCAATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: VYLLMLSLLQPHNSPRSVCRCMI*AHCNLC Trigger: GCAGAGATTGCAGTGAGCCAAGATCATGCACCTACA...CACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGATATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CAA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTTCCAGTCTAGCGTTGTaGGACATTTGGTTTGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: SPNAIPPPTPQQSPECDVSSLAL*DIWFGS Trigger: GGAACCAAACCAAATGTCCAACAACGCTAGACTGGA...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CAA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTTTCTTCATATCTCTTTaGTTCAGGTTGACGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SPNAIPPPTPQQSPECDVFFISL*FRLTGF Trigger: GAAGCCCGTCAACCTGAACAAAAGAGATATGAAGAA...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CAA 90 bp | TCTCCTAATGCTATCCCTCCTCCAACCCCACAACAGTCCCCGGAGTGTGATGTTCATAGGACAGCAGTGTaGCCACCATTAACAAATTCT | + |
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Preference number: 5 (lower is better) Translates to: SPNAIPPPTPQQSPECDVHRTAV*PPLTNS Trigger: AGAATTTGTTAATGGTGGCAACACTGCTGTCCTATG...AACATCACACTCCGGGGACTGTTGTGGGGTTGGAGGAGGGATAGCATTAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CAA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCAGGTGTGAGGCTAGCCTaGTTTTGCACCTCGATGACT | + |
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Preference number: 5 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSGVRLA*FCTSMT Trigger: AGTCATCGAGGTGCAAAACAAGGCTAGCCTCACACC...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CAA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCAATTTCAACGGCAGGCTaGAAGGCAGATGGCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSISTAG*KADGFS Trigger: TGAGAAGCCATCTGCCTTCAAGCCTGCCGTTGAAAT...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS-3UTR CAA 90 bp | AGAATGATGGTTTCCAGTTTCATTCATGTCCCTACAAAGGACATGAACTTATCATGTTGGACATTTGGTTaGGTTCCAAGTCTTTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: RMMVSSFIHVPTKDMNLSCWTFG*VPSLCC Trigger: ACAGCAAAGACTTGGAACCAAACCAAATGTCCAACA...TGATAAGTTCATGTCCTTTGTAGGGACATGAATGAAACTGGAAACCATCATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580206.1 |
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| CDS CCA 72 bp | CAGCTGTATGGATCTTCCCTAGATCCCCGAAGTAGATaGTCCCGTAGTCCTTCTCAGTGTAGACCCGTTCGC | + |
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Preference number: 6 (lower is better) Translates to: QLYGSSLDPRSR*SRSPSQCRPVR Trigger: GCGAACGGGTCTACACTGAGAAGGACTACGGGACCATCTACTTCGGGGATCTAGGGAAGATCCATACAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358984.9 ENST00000580206.1 ENST00000665241.1 |
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