RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD28 (Homo sapiens)

Ensembl gene IDs: ENSG00000206560

Ensembl transcript IDs: ENST00000399451.6, ENST00000412318.5, ENST00000439830.5, ENST00000451422.1, ENST00000460278.5, ENST00000461696.1, ENST00000462657.1, ENST00000463533.1, ENST00000476472.5, ENST00000479043.1, ENST00000492895.1, ENST00000497037.5, ENST00000498524.5, ENST00000498713.1, ENST00000624145.3, ENST00000683139.1

Found 694 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTaGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAG +
Preference number: 1 (lower is better)
Translates to: AECARFILPTFSGFS*RTDPGPKTEVTGRE
Trigger: CTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR CCA 90 bp TCCAACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTaGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGC +
Preference number: 1 (lower is better)
Translates to: SNNTGVVQIPFETVL*GFPSLGADQRKWLS
Trigger: GCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR GCA 90 bp AGCACTGCTAACCAGCATCTCAACTGTATTTGTTTGTCCATTTTCTaGAGCCATCATAAGAGGTGTTTTCCCTGTAGAGTCCACAGAATT +
Preference number: 1 (lower is better)
Translates to: STANQHLNCICLSIF*SHHKRCFPCRVHRI
Trigger: AATTCTGTGGACTCTACAGGGAAAACACCTCTTATGATGGCTGCAGAAAATGGACAAACAAATACAGTTGAGATGCTGGTTAGCAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451422.1
3UTR TCA 90 bp TTAATGTACTTATTCCAACAATACTGGCGTAGTTCAAATACCATTTaGGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAG +
Preference number: 1 (lower is better)
Translates to: LMYLFQQYWRSSNTI*DSTLGFPFIGCRPK
Trigger: CTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTTGGAATAAGTACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR GCA 90 bp TCTACTCTGTGTGAGGATAAGAAACACTACAGAACAGGGCCTGAATaGTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGT +
Preference number: 1 (lower is better)
Translates to: STLCEDKKHYRTGPE*FRHTRCNHKGNFYG
Trigger: ACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTCAGGCCCTGTTCTGTAGTGTTTCTTATCCTCACACAGAGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR GCA 90 bp TGTAAGCAGGTTAGAGTGCACAGTGTCCCCAATTGTTCCTGGCACTaGAAAACCAAATTAAACAATTCCACAAAGAATTCTGACATCAAT +
Preference number: 1 (lower is better)
Translates to: CKQVRVHSVPNCSWH*KTKLNNSTKNSDIN
Trigger: ATTGATGTCAGAATTCTTTGTGGAATTGTTTAATTTGGTTTTGCAGTGCCAGGAACAATTGGGGACACTGTGCACTCTAACCTGCTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR TCA 90 bp TATTTAAAAGCCGAAATATCAGCCTTCTCTCTCTCTTTTGCTATTTaGAAGGTAGTCTTCAATTTGGCAGGCAACTGCTTCTCTCTCCAA +
Preference number: 1 (lower is better)
Translates to: YLKAEISAFSLSFAI*KVVFNLAGNCFSLQ
Trigger: TTGGAGAGAGAAGCAGTTGCCTGCCAAATTGAAGACTACCTTTCAAATAGCAAAAGAGAGAGAGAAGGCTGATATTTCGGCTTTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR GCA 90 bp GCACACTTTACAGCTTTATTAGCAGCAGCTATATGTAAAGGGGTTTaGCAATTTTTGTCTCGAGCATTAACATCTGCAGAATGCTTCAAA +
Preference number: 1 (lower is better)
Translates to: AHFTALLAAAICKGV*QFLSRALTSAECFK
Trigger: TTTGAAGCATTCTGCAGATGTTAATGCTCGAGACAAAAATTGGCAAACCCCTTTACATATAGCTGCTGCTAATAAAGCTGTAAAGTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439830.5
3UTR CCA 90 bp TTCATTAGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTaGAAATCACTTCAGCAGAGAAGTCAAACAGCCTGTAAAAGAGAA +
Preference number: 1 (lower is better)
Translates to: FIRCGKSNSVSNESF*KSLQQRSQTACKRE
Trigger: TTCTCTTTTACAGGCTGTTTGACTTCTCTGCTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCTAATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR TCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGAGCTGCTCAACAACTaGATGGACTGCTTGGTGAGG +
Preference number: 2 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGELLNN*MDCLVR
Trigger: CCTCACCAAGCAGTCCATTCAGTTGTTGAGCAGCTC...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR TCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGCTGCTCAACAACTaGATGGACTGCTTGGTGAGG +
Preference number: 2 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRELLNN*MDCLVR
Trigger: CCTCACCAAGCAGTCCATTCAGTTGTTGAGCAGCTC...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGAGGAAGTGGTTAAGCTaGGGGGCAGACTCTCACAGA +
Preference number: 2 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGRKWLS*GADSHR
Trigger: TCTGTGAGAGTCTGCCCCCCAGCTTAACCACTTCCT...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGGGGGTTTCCCTTCATTaGGTGCAGACCAAAGGAAGT +
Preference number: 2 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGGVSLH*VQTKGS
Trigger: ACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCC...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
52% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR TCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCTTTGAAGCTTTACTGTaGGAACTCCCTCCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQAFEALL*ELPPPQ
Trigger: CTGAGGAGGAGGGAGTTCTCACAGTAAAGCTTCAAA...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGGTAAGCAGGTTAGAGTaGACAGTGTCCCCAATTGTT +
Preference number: 2 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRVSRLE*TVSPIV
Trigger: AACAATTGGGGACACTGTGCACTCTAACCTGCTTAC...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR CCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGTGGAAGTGTTCAAGGTaGAAAGATCACCCTTGTAGA +
Preference number: 2 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRWKCSR*KDHPCR
Trigger: TCTACAAGGGTGATCTTTCCACCTTGAACACTTCCA...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGTATTTTCACCCGTATTaGACCCAGTCAGCTGGTTTT +
Preference number: 2 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRYFHPY*TQSAGF
Trigger: AAAACCAGCTGACTGGGTGCAATACGGGTGAAAATA...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR TCA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGCACTTAGAGATCTCCTaGACTAAATGGCATTGTTTG +
Preference number: 2 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRHLEIS*TKWHCL
Trigger: CAAACAATGCCATTTAGTTCAGGAGATCTCTAAGTG...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp CTGCATGATGTAATGCAGTCCTCCCTGCTCGATCAGATACGTTTACATTACTCAATCTCCAAGGTAAGCTaGGGCGTGCAATGGGGTTCG +
Preference number: 2 (lower is better)
Translates to: LHDVMQSSLLDQIRLHYSISKVS*GVQWGS
Trigger: CGAACCCCATTGCACGCCGCAGCTTACCTTGGAGAT...TGAGTAATGTAAACGTATCTGATCGAGCAGGGAGGACTGCATTACATCATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439830.5
3UTR-3UTR TCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCAGTTCAAATACCATTTaGGACAGTACTTTGGGGTTT +
Preference number: 2 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQASSNTI*DSTLGF
Trigger: AAACCCCAAAGTACTGTCTCAAATGGTATTTGAACT...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTAGACATGGCAGAATGTaGGAGATTCATCCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGRHGRM*EIHPSN
Trigger: GTTGGAAGGATGAATCTCGCACATTCTGCCATGTCT...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCAGGAAATTTCTACGGTaGTGTGTTCATTCATTCAAG +
Preference number: 2 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQARKFLR*CVHSFK
Trigger: CTTGAATGAATGAACACAGCACCGTAGAAATTTCCT...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CCA 90 bp CATCTGCAGAATGCTTCAAAAGTACCTGAACTGCTTCCTCACTACAAGATGCAAAGCTGCGGCGTGCAATaGGGTTCGCTTTTCATTGTC +
Preference number: 2 (lower is better)
Translates to: HLQNASKVPELLPHYKMQSCGVQ*GSLFIV
Trigger: GACAATGAAAAGCGAACCCCATTGCACGCCGCAGCT...TTGCATCTTGTAGTGAGGAAGCAGTTCAGGTACTTTTGAAGCATTCTGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439830.5
3UTR-3UTR TCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAAGGTTAGAGACTGGATaGACCTCAGGTCTCTTTCAA +
Preference number: 2 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRRLETG*TSGLFQ
Trigger: TTGAAAGAGACCTGAGGTTCATCCAGTCTCTAACCT...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGACATGGCAGAATGTaGGAGATTCATCCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGRHGRM*EIHPSN
Trigger: GTTGGAAGGATGAATCTCGCACATTCTGCCATGTCT...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTTTTCCCTTCATTGGGTaGAGACCAAAGGAAGTGGTT +
Preference number: 2 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSFPFIG*RPKEVV
Trigger: AACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAA...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTGGTCCTTTTGCAATTTaGTGTGCACATAATGCCTAC +
Preference number: 2 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGGPFAI*CAHNAY
Trigger: GTAGGCATTATGTGCACAGCAAATTGCAAAAGGACC...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR CCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCGCAGACTCTCACAGATaGATTACAAAAGTAATGAAA +
Preference number: 2 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQAADSHR*ITKVMK
Trigger: TTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGC...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCGGTTTAATACAGCATTaGAAGGCTTTCAGATGTTTT +
Preference number: 2 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQAGLIQH*KAFRCF
Trigger: AAAACATCTGAAAGCCTTCCAATGCTGTATTAAACC...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR TCA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGGAGCTGCTCAACAACTaGATGGACTGCTTGGTGAGG +
Preference number: 2 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVELLNN*MDCLVR
Trigger: CCTCACCAAGCAGTCCATTCAGTTGTTGAGCAGCTC...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACAGACATGGCAGAATGTaGGAGATTCATCCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: VQIPFETVLWGFPSLGADRHGRM*EIHPSN
Trigger: GTTGGAAGGATGAATCTCGCACATTCTGCCATGTCT...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTGTAAGCAGGTTAGAGTaGACAGTGTCCCCAATTGTT +
Preference number: 2 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSIVSRLE*TVSPIV
Trigger: AACAATTGGGGACACTGTGCACTCTAACCTGCTTAC...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR TCA 90 bp AACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTTTGAAGCTTTACTGTaGGAACTCCCTCCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: NNTGVVQIPFETVLWGFPFEALL*ELPPPQ
Trigger: CTGAGGAGGAGGGAGTTCTCACAGTAAAGCTTCAAA...AGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR TCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTTCCACAAAGAATTCTaGCATCAATGTGTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGFHKEF*HQCVFL
Trigger: GAGGAAAACACATTGATGTCAGAATTCTTTGTGGAA...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR GCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTAATTTGGCAGGCAACTaGTTCTCTCTCCAAATAGTA +
Preference number: 2 (lower is better)
Translates to: VESLGSVQGGKITLVEGTNLAGN*FSLQIV
Trigger: TACTATTTGGAGAGAGAAGCAGTTGCCTGCCAAATT...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR CCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTGTAAAAGAGAAGACATaGCAGAATGTGCGAGATTCA +
Preference number: 2 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSVKEKT*QNVRDS
Trigger: TGAATCTCGCACATTCTGCCATGTCTTCTCTTTTAC...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAGTAAAAGAGAAGACATaGCAGAATGTGCGAGATTCA +
Preference number: 2 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGVKEKT*QNVRDS
Trigger: TGAATCTCGCACATTCTGCCATGTCTTCTCTTTTAC...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CCA 90 bp CAGAATGCTTCAAAAGTACCTGAACTGCTTCCTCACTACAAGATGCAACTGCTCCATACTATTTTCCTCTaGTGGAGGCAGTTGTACTGT +
Preference number: 2 (lower is better)
Translates to: QNASKVPELLPHYKMQLLHTIFL*WRQLYC
Trigger: ACAGTACAACTGCCTCCACCAGAGGAAAATAGTATG...GAGCAGTTGCATCTTGTAGTGAGGAAGCAGTTCAGGTACTTTTGAAGCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439830.5
3UTR-3UTR TCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTTTCCACAAAGAATTCTaGCATCAATGTGTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: VESLGSVQGGKITLVEGTFHKEF*HQCVFL
Trigger: GAGGAAAACACATTGATGTCAGAATTCTTTGTGGAA...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR GCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTTTAAAGGAGGTCATTTaGTATTACCACCATTTCACC +
Preference number: 2 (lower is better)
Translates to: VESLGSVQGGKITLVEGTLKEVI*YYHHFT
Trigger: GGTGAAATGGTGGTAATAGCAAATGACCTCCTTTAA...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp ATGCAGTCCTCCCTGCTCGATCAGATACGTTTACATTACTCAGAAGAGGTACCAATATGTAAAGGGGTTTaGCAATTTTTGTCTCGAGCA +
Preference number: 2 (lower is better)
Translates to: MQSSLLDQIRLHYSEEVPICKGV*QFLSRA
Trigger: TGCTCGAGACAAAAATTGGCAAACCCCTTTACATAT...TGGTACCTCTTCTGAGTAATGTAAACGTATCTGATCGAGCAGGGAGGACTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439830.5
3UTR-3UTR CCA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTTCAAATGAGTCCTTCTaGAAATCACTTCAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSISNESF*KSLQQR
Trigger: TCTCTGCTGAAGTGATTTCCAGAAGGACTCATTTGA...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR CAA 90 bp TTGCCTTTAAAACTCTTCCTCCTAATGCCATCAGATCTCTTAACATaGGCTCACTGTGGGATCTTTCCTCTTAGGTTGAATTTCTACGTG +
Preference number: 2 (lower is better)
Translates to: LPLKLFLLMPSDLLT*AHCGIFPLRLNFYV
Trigger: CACGTAGAAATTCAACCTAAGAGGAAAGATCCCACAGTGAGCCAATGTTAAGAGATCTGATGGCATTAGGAGGAAGAGTTTTAAAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR TCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCTTTGAAGCTTTACTGTaGGAACTCCCTCCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFFEALL*ELPPPQ
Trigger: CTGAGGAGGAGGGAGTTCTCACAGTAAAGCTTCAAA...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR TCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGAGGTTAGAGACTGGATaGACCTCAGGTCTCTTTCAA +
Preference number: 2 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGRLETG*TSGLFQ
Trigger: TTGAAAGAGACCTGAGGTTCATCCAGTCTCTAACCT...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR GCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCACTGTCATTAAAATaGATATTCACCTTCCTACTA +
Preference number: 2 (lower is better)
Translates to: VESLGSVQGGKITLVEGTPLSLK*IFTFLL
Trigger: TAGTAGGAAGGTGAATATGCATTTTAATGACAGTGG...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR CAA 90 bp ATTCCTTTAAAACTCTTCCTCCTAATGCCATCAGATCTCTTAACATaGGCTCACTGTGGGATCTTTCCTCTTAGGTTGAATTTCTACGTG +
Preference number: 2 (lower is better)
Translates to: IPLKLFLLMPSDLLT*AHCGIFPLRLNFYV
Trigger: CACGTAGAAATTCAACCTAAGAGGAAAGATCCCACAGTGAGCCAATGTTAAGAGATCTGATGGCATTAGGAGGAAGAGTTTTAAAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412318.5
3UTR CAA 90 bp TCCTCACTACAAGATGCAACTGCTCTGTGTAAAGGTGTCAACCATTaGCTGTCTTTGGCATTAACTCTAGCTCCAGATAAAATAAGAAGT +
Preference number: 2 (lower is better)
Translates to: SSLQDATALCKGVNH*LSLALTLAPDKIRS
Trigger: ACTTCTTATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439830.5
3UTR-3UTR TCA 90 bp CATCTGCAGAATGCTTCAAAAGTACCTGAACTGCTTCCTCACTACAAGATGCAACGCTTTTCATTGTCCTaGAAGTTAACATCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: HLQNASKVPELLPHYKMQRFSLS*KLTSSF
Trigger: GAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCG...TTGCATCTTGTAGTGAGGAAGCAGTTCAGGTACTTTTGAAGCATTCTGCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439830.5
3UTR-3UTR GCA 90 bp CATCTGCAGAATGCTTCAAAAGTACCTGAACTGCTTCCTCACTACAAGATGCAACCGTTAAATATAGCTTaGACCAGTGATGGCATAATA +
Preference number: 2 (lower is better)
Translates to: HLQNASKVPELLPHYKMQPLNIA*TSDGII
Trigger: TATTATGCCATCACTGGTGCAAGCTATATTTAACGG...TTGCATCTTGTAGTGAGGAAGCAGTTCAGGTACTTTTGAAGCATTCTGCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439830.5
3UTR-3UTR CCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGTGGAAGTGTTCAAGGTaGAAAGATCACCCTTGTAGA +
Preference number: 2 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGWKCSR*KDHPCR
Trigger: TCTACAAGGGTGATCTTTCCACCTTGAACACTTCCA...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCATCTGCTTTCTCTCATaGTTTAATACAGCATTGGAA +
Preference number: 2 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTICFLS*FNTALE
Trigger: TTCCAATGCTGTATTAAACCATGAGAGAAAGCAGAT...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR GCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATTTTCCCTTCATTGGGTaGAGACCAAAGGAAGTGGTT +
Preference number: 2 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNFPFIG*RPKEVV
Trigger: AACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAA...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGTGGAAGTGTTCAAGGTaGAAAGATCACCCTTGTAGA +
Preference number: 2 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQWKCSR*KDHPCR
Trigger: TCTACAAGGGTGATCTTTCCACCTTGAACACTTCCA...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCGTCCCCAATTGTTCCTaGCACTGCAAAACCAAATTA +
Preference number: 2 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFVPNCS*HCKTKL
Trigger: TAATTTGGTTTTGCAGTGCCAGGAACAATTGGGGAC...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR CCA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATAGTCCCCAATTGTTCCTaGCACTGCAAAACCAAATTA +
Preference number: 2 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYIVPNCS*HCKTKL
Trigger: TAATTTGGTTTTGCAGTGCCAGGAACAATTGGGGAC...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR CCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGGGTTTAATACAGCATTaGAAGGCTTTCAGATGTTTT +
Preference number: 2 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGGLIQH*KAFRCF
Trigger: AAAACATCTGAAAGCCTTCCAATGCTGTATTAAACC...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR CCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATAACCTTTCAGTTATTTaGTCCTTTTGCAATTTGCTG +
Preference number: 2 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNNLSVI*SFCNLL
Trigger: CAGCAAATTGCAAAAGGACCAAATAACTGAAAGGTT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR CCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATATCTGCTTTCTCTCATaGTTTAATACAGCATTGGAA +
Preference number: 2 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNICFLS*FNTALE
Trigger: TTCCAATGCTGTATTAAACCATGAGAGAAAGCAGAT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR CCA 72 bp GCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTaGAGGACAGACCCAGGCCCAAAGACAGAAGTTACC +
Preference number: 3 (lower is better)
Translates to: ARFILPTFSGFS*RTDPGPKTEVT
Trigger: GGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CAA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTGGGGTTTCCCTTCATaGGGTGCAGACCAAAGGAAG +
Preference number: 3 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDWGFPS*GADQRK
Trigger: CTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCA...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CAA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACCCATTCATAGAGAGGTaGAAGACTCCATGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDPFIER*KTPCPR
Trigger: CCTGGGGCATGGAGTCTTCAACCTCTCTATGAATGG...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR CAA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCTCAGATCTCTTAACATaGGCTCACTGTGGGATCTTT +
Preference number: 3 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQASDLLT*AHCGIF
Trigger: AAAGATCCCACAGTGAGCCAATGTTAAGAGATCTGA...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR CCA 72 bp CCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTaGGGGGCAGACTCTCACAGATGGATTACAAAAGTA +
Preference number: 3 (lower is better)
Translates to: PSLGADQRKWLS*GADSHRWITKV
Trigger: TACTTTTGTAATCCATCTGTGAGAGTCTGCCCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CAA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGGTTAAAGGAGGTCATTaGCTATTACCACCATTTCAC +
Preference number: 3 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGVKGGH*LLPPFH
Trigger: GTGAAATGGTGGTAATAGCAAATGACCTCCTTTAAC...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CAA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCTTTGAGATGAGTGTCTaGTTAAAGGAGGTCATTTGC +
Preference number: 3 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQAFEMSV*LKEVIC
Trigger: GCAAATGACCTCCTTTAACAAGACACTCATCTCAAA...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR CCA 72 bp GATTTCTGCATCTCCAAGGTAAGCTGCGGCGTGCAATaGGGTTCGCTTTTCATTGTCCTGAAAGTTAACATC +
Preference number: 3 (lower is better)
Translates to: DFCISKVSCGVQ*GSLFIVLKVNI
Trigger: GATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439830.5
3UTR-3UTR CAA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTCAGATCTCTTAACATaGGCTCACTGTGGGATCTTT +
Preference number: 3 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGSDLLT*AHCGIF
Trigger: AAAGATCCCACAGTGAGCCAATGTTAAGAGATCTGA...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CAA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGAATTCTCAGGGTTCTCTaGGAGGACAGACCCAGGCCC +
Preference number: 3 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRILRVL*EDRPRP
Trigger: GGGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAAT...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR CCA 72 bp ACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTaGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAG +
Preference number: 3 (lower is better)
Translates to: TGVVQIPFETVL*GFPSLGADQRK
Trigger: CTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR GCA 72 bp TGTTACAATAGTGTTGCTTGTGTAAGCAGGTTAGAGTaGACAGTGTCCCCAATTGTTCCTGGCACTGCAAAA +
Preference number: 3 (lower is better)
Translates to: CYNSVACVSRLE*TVSPIVPGTAK
Trigger: TTTTGCAGTGCCAGGAACAATTGGGGACACTGTGCACTCTAACCTGCTTACACAAGCAACACTATTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR CAA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATGCACAGTGTCCCCAATaGTTCCTGGCACTGCAAAAC +
Preference number: 3 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNAQCPQ*FLALQN
Trigger: GTTTTGCAGTGCCAGGAACAATTGGGGACACTGTGC...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR TCA 72 bp TTATTCCAACAATACTGGCGTAGTTCAAATACCATTTaGGACAGTACTTTGGGGTTTCCCTTCATTGGGTGC +
Preference number: 3 (lower is better)
Translates to: LFQQYWRSSNTI*DSTLGFPFIGC
Trigger: GCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTTGGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR GCA 72 bp GCTCGAACTTCATCAGGATCTCCGTTAAATATAGCTTaGACCAGTGATGGCATAATAGGAATTCCCATACTA +
Preference number: 3 (lower is better)
Translates to: ARTSSGSPLNIA*TSDGIIGIPIL
Trigger: TAGTATGGGAATTCCTATTATGCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439830.5
3UTR-3UTR CAA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACAGTTATTTGGTCCTTTaGCAATTTGCTGTGCACATA +
Preference number: 3 (lower is better)
Translates to: VQIPFETVLWGFPSLGADSYLVL*QFAVHI
Trigger: TATGTGCACAGCAAATTGCAAAAGGACCAAATAACT...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
3UTR-3UTR CAA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATCAGATCTCTTAACATaGGCTCACTGTGGGATCTTT +
Preference number: 3 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYISDLLT*AHCGIF
Trigger: AAAGATCCCACAGTGAGCCAATGTTAAGAGATCTGA...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR GCA 72 bp ACAGCTTTATTAGCAGCAGCTATATGTAAAGGGGTTTaGCAATTTTTGTCTCGAGCATTAACATCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: TALLAAAICKGV*QFLSRALTSAE
Trigger: TTCTGCAGATGTTAATGCTCGAGACAAAAATTGGCAAACCCCTTTACATATAGCTGCTGCTAATAAAGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439830.5
3UTR GCA 72 bp TTGTTTGAGATGAGTGTCTTGTTAAAGGAGGTCATTTaGTATTACCACCATTTCACCCAAAGTAGTTCTAGA +
Preference number: 3 (lower is better)
Translates to: LFEMSVLLKEVI*YYHHFTQSSSR
Trigger: TCTAGAACTACTTTGGGTGAAATGGTGGTAATAGCAAATGACCTCCTTTAACAAGACACTCATCTCAAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CAA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATCTTTATAGCTACACCTaGGATTTCATTAGATGTGGT +
Preference number: 3 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNLYSYT*DFIRCG
Trigger: ACCACATCTAATGAAATCCAAGGTGTAGCTATAAAG...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR-3UTR CAA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATAGTTATTTGGTCCTTTaGCAATTTGCTGTGCACATA +
Preference number: 3 (lower is better)
Translates to: VAFARTTLMFLVTASFTYSYLVL*QFAVHI
Trigger: TATGTGCACAGCAAATTGCAAAAGGACCAAATAACT...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGATGCGCTGAGAAGACCTaGGGGCAGGGGGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGCAEKT*GQGAAP
Trigger: CGGCGCCGCCCCCTGCCCGCAGGTCTTCTCAGCGCA...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399451.6
CDS-3UTR GCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCATCTCCAAGGTAAGCTaGGGCGTGCAATGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFISKVS*GVQWGS
Trigger: CGAACCCCATTGCACGCCGCAGCTTACCTTGGAGAT...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCACAGAATCGGAGTCGTTaGGCTCATCCACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASQNRSR*AHPRQC
Trigger: ACACTGACGTGGATGAGCTCAACGACTCCGATTCTG...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGATGCACCAGTGATGGCTaGTCACGGAGTTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGCTSDG*SRSLRN
Trigger: GTTCCTCAAACTCCGTGACCAGCCATCACTGGTGCA...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000412318.5
CDS-3UTR CCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGAGCTGCGGCGTGCAATaGGGTTCGCTTTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRSCGVQ*GSLFIV
Trigger: GACAATGAAAAGCGAACCCCATTGCACGCCGCAGCT...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAAGGAAGTGGTTAAGCTaGGGGGCAGACTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASRKWLS*GADSHR
Trigger: TCTGTGAGAGTCTGCCCCCCAGCTTAACCACTTCCT...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCGGGGTTTCCCTTCATTaGGTGCAGACCAAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFGVSLH*VQTKGS
Trigger: ACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCC...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCACCACTGAAAGCTGCATaGTGTAATGCAGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASPLKAA*CNAVLP
Trigger: AGGGAGGACTGCATTACATCATGCAGCTTTCAGTGG...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGACTCTACATGGTCTGTaGAGGCGGCTGCATGGAGAG +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGTLHGL*RRLHGE
Trigger: CTCTCCATGCAGCCGCCTTCACAGACCATGTAGAGT...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGACAGGCACTGGTAATTaGAGTTGGCAGCAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRTGTGN*SWQQRS
Trigger: ACTACGCTGCTGCCAACTGCAATTACCAGTGCCTGT...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGATTTCGGGCAGCAACATaGAGAGGTGTTTGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGFRAAT*RGVCKA
Trigger: AGCCTTGCAAACACCTCTGCATGTTGCTGCCCGAAA...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGACTGGTAATTGCAGTTaGCAGCAGCGTAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRTGNCS*QQRSAV
Trigger: CACTGCACTACGCTGCTGCCAACTGCAATTACCAGT...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAAGCCACAAGGAAATCTaGTGTACTGCCTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASSHKEI*CTASAD
Trigger: GTCAGCAGAGGCAGTACACCAGATTTCCTTGTGGCT...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624145.3
CDS-3UTR TCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCACTGGATAATGGTTTGTaGTCGGGAGAATCTACCGTG +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASLDNGL*SGESTV
Trigger: CACGGTAGATTCTCCCGATCACAAACCATTATCCAG...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAATTCACACTTGCTCCTaGTCCCACAAGAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGIHTCS*SHKSKQ
Trigger: CTGTTTGCTCTTGTGGGATCAGGAGCAAGTGTGAAT...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGTCATGGTGGCCAAAATaGGAGCCAGGCAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGSWWPK*EPGNQP
Trigger: TGGCTGATTGCCTGGCTCTCATTTTGGCCACCATGA...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAGAATCGGAGTCGTTaGGCTCATCCACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQAQNRSR*AHPRQC
Trigger: ACACTGACGTGGATGAGCTCAACGACTCCGATTCTG...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAGGTTAGAGACTGGATaGACCTCAGGTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFRLETG*TSGLFQ
Trigger: TTGAAAGAGACCTGAGGTTCATCCAGTCTCTAACCT...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCTCCACTAGAGGCTGCTaGATGAAGAGGTGTATAAGA +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFSTRGC*MKRCIR
Trigger: TCTTATACACCTCTTCATGCAGCAGCCTCTAGTGGA...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGCTCATGGCCATACCGTaGTGCTATGTGCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGLMAIP*CYVQRG
Trigger: ACCCCTTTGCACATAGCAGCACGGTATGGCCATGAG...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCCTCATGGCCATACCGTaGTGCTATGTGCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQALMAIP*CYVQRG
Trigger: ACCCCTTTGCACATAGCAGCACGGTATGGCCATGAG...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAACTGCGTTGTATCCTTaGTTATCACGGATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGTALYP*LSRIPG
Trigger: TCCAGGGATCCGTGATAAGCAAGGATACAACGCAGT...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGCAAGCCCAGTGAAGTaGCGTATATCCATGATTGTC +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRASPVK*RISMIV
Trigger: GACAATCATGGATATACGGCACTTCACTGGGCTTGC...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCGTAAGCAGGTTAGAGTaGACAGTGTCCCCAATTGTT +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFVSRLE*TVSPIV
Trigger: AACAATTGGGGACACTGTGCACTCTAACCTGCTTAC...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCTGCACCAGTGATGGCTaGTCACGGAGTTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQACTSDG*SRSLRN
Trigger: GTTCCTCAAACTCCGTGACCAGCCATCACTGGTGCA...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000412318.5
CDS-3UTR CCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAAGCAGCGTAGTGCAGTaGAGATCTCCCAAATTTGTC +
Preference number: 4 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGSSVVQ*RSPKFV
Trigger: GACAAATTTGGGAGATCTCCACTGCACTACGCTGCT...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGATGTAAACACTCTACATaGTCTGTGAAGGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGCKHST*SVKAAA
Trigger: TGCAGCCGCCTTCACAGACCATGTAGAGTGTTTACA...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGAGCACAGGCCAAAGCTaGGGTATAGCCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRSTGQS*GIAIFI
Trigger: GATGAAAATGGCTATACCCCAGCTTTGGCCTGTGCT...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCAGGAAGTGGTTAAGCTaGGGGGCAGACTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQARKWLS*GADSHR
Trigger: TCTGTGAGAGTCTGCCCCCCAGCTTAACCACTTCCT...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGACGCGGCCGACTGCGCTaGGAAGACCTGCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRRGRLR*EDLRAG
Trigger: CCCTGCCCGCAGGTCTTCTCAGCGCAGTCGGCCGCG...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399451.6
CDS-3UTR TCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCGCTGGTCACGGAGTTTaGGGAACGCCATGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTAGHGV*GTPWRS
Trigger: CGACCGCCATGGCGTTCCTCAAACTCCGTGACCAGC...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000412318.5
CDS-3UTR TCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGCTTGCCATCTGTGTCTaGTGTAGCTGCATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGLAICV*CSCIVQ
Trigger: CTGCACTATGCAGCTACATCAGACACAGATGGCAAG...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAGCAAAGCTTCAAAGCTaGCTGTTTTTGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASAKLQS*LFLRCW
Trigger: CCAACACCTCAAAAACAGTCAGCTTTGAAGCTTTGC...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGGGGTCCGCGGCCGACTaGGCTGAGAAGACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGGSAAD*AEKTCG
Trigger: CCCGCAGGTCTTCTCAGCGCAGTCGGCCGCGGACCC...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000399451.6
CDS-3UTR GCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGATCCACTAGAGGCTGCTaGATGAAGAGGTGTATAAGA +
Preference number: 4 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGSTRGC*MKRCIR
Trigger: TCTTATACACCTCTTCATGCAGCAGCCTCTAGTGGA...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCACATTCCACTAGAGGCTaGTGCATGAAGAGGTGTATA +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASHSTRG*CMKRCI
Trigger: TATACACCTCTTCATGCAGCAGCCTCTAGTGGAATG...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGACAGGCACTGGTAATTaGAGTTGGCAGCAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGTGTGN*SWQQRS
Trigger: ACTACGCTGCTGCCAACTGCAATTACCAGTGCCTGT...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCGTCTGTGAAGGCGGCTaGATGGAGAGGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCVCEGG*MERSSS
Trigger: GGAAGAACTCCTCTCCATGCAGCCGCCTTCACAGAC...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGACATGCAGAGGTGTTTaGAAGGCTGCGTTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGTCRGV*KAALVA
Trigger: TGCAACCAACGCAGCCTTGCAAACACCTCTGCATGT...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCGCCATTTTCATCTACTaGAAGCACACTTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFAIFIY*KHTCSF
Trigger: AAAGGAGCAAGTGTGCTTGCAGTAGATGAAAATGGC...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCATTACAGCTCCACTCTaGATAATGGTTTGTGATCGG +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFITAPL*IMVCDR
Trigger: CCGATCACAAACCATTATCCAGAGTGGAGCTGTAAT...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGACTGGTAATTGCAGTTaGCAGCAGCGTAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGTGNCS*QQRSAV
Trigger: CACTGCACTACGCTGCTGCCAACTGCAATTACCAGT...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAATTGTCTGCTGTGGCTaGATTTGCATCCATAGATGC +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASIVCCG*ICIHRC
Trigger: GCATCTATGGATGCAAATCCAGCCACAGCAGACAAT...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGATTCCTTTTGAATCTGTaGCGTTCACAATGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGFLLNL*RSQCWH
Trigger: GTGCCAGCATTGTGAACGCCACAGATTCAAAAGGAA...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp CTGCATCTCCAAGGTAAGCTGCGGCGTGCAATGGGGTTCGCTTTTCATTGTCCTTTCCAATCACAGGCCTaGTCACGGAGTTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LHLQGKLRRAMGFAFHCPFQSQA*SRSLRN
Trigger: GTTCCTCAAACTCCGTGACCAGGCCTGTGATTGGAA...AGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS-3UTR TCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGTGCTTCAAAAGTACCTaGACTGCTTCCTCACTACAA +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRCFKST*TASSLQ
Trigger: TTGTAGTGAGGAAGCAGTTCAGGTACTTTTGAAGCA...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGATTCACACTTGCTCCTaGTCCCACAAGAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGIHTCS*SHKSKQ
Trigger: CTGTTTGCTCTTGTGGGATCAGGAGCAAGTGTGAAT...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAAAGATTGAGGCTCCCTaGTTAATGAGTACATCCACA +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASKIEAP*LMSTST
Trigger: TGTGGATGTACTCATTAATCAGGGAGCCTCAATCTT...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGTTTGTTGCTGCTGCATaGATAGGTGTCCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRFVAAA*IGVLFK
Trigger: TTTGAAGAGGACACCTATTCATGCAGCAGCAACAAA...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGACTCTACATGGTCTGTaGAGGCGGCTGCATGGAGAG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLTLHGL*RRLHGE
Trigger: CTCTCCATGCAGCCGCCTTCACAGACCATGTAGAGT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCCTTGAGCATTATGGCTaGGCAGCAGCTGTAAACACT +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQALEHYG*AAAVNT
Trigger: AGTGTTTACAGCTGCTGCTCAGCCATAATGCTCAAG...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGTTTCCCAAAAGTTCCTaGACCACCATTGTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRFPKSS*TTIVSP
Trigger: TGGGCTAACAATGGTGGTTCAGGAACTTTTGGGAAA...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAAAGCTGACTGTTTTTaGGGTGTTGGTATAACGGTT +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFKADCF*GVGITV
Trigger: AACCGTTATACCAACACCTCAAAAACAGTCAGCTTT...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATCTCCAAGGTAAGCTaGGGCGTGCAATGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLISKVS*GVQWGS
Trigger: CGAACCCCATTGCACGCCGCAGCTTACCTTGGAGAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCGATGCAGCAGCAAAGTaGAAAGGAGTAAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFDAAAK*KGVNPF
Trigger: AAAAGGATTTACTCCTTTGCACTTTGCTGCTGCATC...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGCATGTAGACAAGTCCTaGCAAAATCATCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRHVDKS*QNHLGY
Trigger: ATACCCCAGATGATTTTGGCAGGACTTGTCTACATG...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCACATGTAGACAAGTCCTaGCAAAATCATCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASHVDKS*QNHLGY
Trigger: ATACCCCAGATGATTTTGGCAGGACTTGTCTACATG...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCATACCAACACTTCCAGTaGTTGATGGTGACCATGATA +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASYQHFQ*LMVTMI
Trigger: TATCATGGTCACCATCAAGCACTGGAAGTGTTGGTA...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGGTAACTGCCCCTCTATaGAACGCTGTCCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLVTAPL*NAVLPH
Trigger: GTGGGGAAGGACAGCGTTGCATAGAGGGGCAGTTAC...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGCACGGCACAATGCAATaGACTAAAAGCATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRHGTMQ*TKSISF
Trigger: GAAGGAAATGCTTTTAGTCCATTGCATTGTGCCGTG...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCTCAAATGAGTCCTTCTaGAAATCACTTCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFSNESF*KSLQQR
Trigger: TCTCTGCTGAAGTGATTTCCAGAAGGACTCATTTGA...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCATTTGAGACAGTACTTTaGGGTTTCCCTTCATTGGGT +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASFETVL*GFPSLG
Trigger: ACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAA...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGCACTTAGCACCATGTTaGAGTAATGCATCTACACAT +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRHLAPC*SNASTH
Trigger: ATGTGTAGATGCATTACTTCAACATGGTGCTAAGTG...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCGCAAAGCTTCAAAGCTaGCTGTTTTTGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQAAKLQS*LFLRCW
Trigger: CCAACACCTCAAAAACAGTCAGCTTTGAAGCTTTGC...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCAGGTTAGAGACTGGATaGACCTCAGGTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQARLETG*TSGLFQ
Trigger: TTGAAAGAGACCTGAGGTTCATCCAGTCTCTAACCT...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATCTTCCCTCTGCTGCCTaGCCTACCCGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNLPSAA*PTRRCR
Trigger: GCGGCAGCGGCGGGTAGGGCAGGCAGCAGAGGGAAG...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399451.6
CDS-3UTR GCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAATCTCCAAGGTAAGCTaGGGCGTGCAATGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRISKVS*GVQWGS
Trigger: CGAACCCCATTGCACGCCGCAGCTTACCTTGGAGAT...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTCATGGCCATACCGTaGTGCTATGTGCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLMAIP*CYVQRG
Trigger: ACCCCTTTGCACATAGCAGCACGGTATGGCCATGAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTGTCTGTGAAGGCGGCTaGATGGAGAGGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VESLGSVQGGKITLVEGTVCEGG*MERSSS
Trigger: GGAAGAACTCCTCTCCATGCAGCCGCCTTCACAGAC...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGAATTTGGCAGGCAACTaGTTCTCTCTCCAAATAGTA +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRNLAGN*FSLQIV
Trigger: TACTATTTGGAGAGAGAAGCAGTTGCCTGCCAAATT...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCTTAAAGGAGGTCATTTaGTATTACCACCATTTCACC +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFLKEVI*YYHHFT
Trigger: GGTGAAATGGTGGTAATAGCAAATGACCTCCTTTAA...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGGTCTGTGAAGGCGGCTaGATGGAGAGGAGTTCATTG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLVCEGG*MERSSL
Trigger: CAATGAACTCCTCTCCATGCAGCCGCCTTCACAGAC...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTAGCTGCGGCGTGCAATaGGGTTCGCTTTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGSCGVQ*GSLFIV
Trigger: GACAATGAAAAGCGAACCCCATTGCACGCCGCAGCT...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGTGGCGTTCACAATGCTaGCACCTAATGTATCAATTA +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRWRSQC*HLMYQL
Trigger: TAATTGATACATTAGGTGCCAGCATTGTGAACGCCA...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTCAGCCACATCCTTATTaGGAGCACAGGCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGQPHPY*EHRPKL
Trigger: CAGCTTTGGCCTGTGCTCCCAATAAGGATGTGGCTG...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACCAGCCACATCCTTATTaGGAGCACAGGCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDQPHPY*EHRPKL
Trigger: CAGCTTTGGCCTGTGCTCCCAATAAGGATGTGGCTG...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCGGGGTTTCCCTTCATTaGGTGCAGACCAAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCGVSLH*VQTKGS
Trigger: ACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCC...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGGTGAAGGCGGCTGCATaGAGAGGAGTTCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLVKAAA*RGVHCS
Trigger: GCTACAATGAACTCCTCTCCATGCAGCCGCCTTCAC...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCCACTGAAAGCTGCATaGTGTAATGCAGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLPLKAA*CNAVLP
Trigger: AGGGAGGACTGCATTACATCATGCAGCTTTCAGTGG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTCACACTTGCTCCTaGTCCCACAAGAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCIHTCS*SHKSKQ
Trigger: CTGTTTGCTCTTGTGGGATCAGGAGCAAGTGTGAAT...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTTGCCATCTGTGTCTaGTGTAGCTGCATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLAICV*CSCIVQ
Trigger: CTGCACTATGCAGCTACATCAGACACAGATGGCAAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTCTTGCCATCTGTGTCTaGTGTAGCTGCATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGLAICV*CSCIVQ
Trigger: CTGCACTATGCAGCTACATCAGACACAGATGGCAAG...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACAGTCTGTGTGCCCGTTaGGAACAGATAGCATCAGAG +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDSLCAR*EQIASE
Trigger: CTCTGATGCTATCTGTTCTCAACGGGCACACAGACT...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGAGTCTGTGTGCCCGTTaGGAACAGATAGCATCAGAG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLSLCAR*EQIASE
Trigger: CTCTGATGCTATCTGTTCTCAACGGGCACACAGACT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCTCCTTTGTTCAGCAATaGGTAAACACAGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQASFVQQ*VNTVCV
Trigger: CACACAGACTGTGTTTACTCATTGCTGAACAAAGGA...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTATCCATAGATGCTGCTaGCTGCAAAAGGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLIHRCC*LQKGSK
Trigger: CTTGGAGCCCTTTTGCAGTCAGCAGCATCTATGGAT...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATCCATAGATGCTGCTaGCTGCAAAAGGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLIHRCC*LQKGSK
Trigger: CTTGGAGCCCTTTTGCAGTCAGCAGCATCTATGGAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTATCCATAGATGCTGCTaGCTGCAAAAGGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGIHRCC*LQKGSK
Trigger: CTTGGAGCCCTTTTGCAGTCAGCAGCATCTATGGAT...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACAGTGCCGTATATCCATaGTTGTCTGCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDSAVYP*LSAVAG
Trigger: TCCAGCCACAGCAGACAATCATGGATATACGGCACT...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGAGTGCCGTATATCCATaGTTGTCTGCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLSAVYP*LSAVAG
Trigger: TCCAGCCACAGCAGACAATCATGGATATACGGCACT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGAGGAGTTCTTCCTTTTaGATCTGTGGCGTTCACAAT +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGRSSSF*ICGVHN
Trigger: ATTGTGAACGCCACAGATTCAAAAGGAAGAACTCCT...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTACTCTACATGGTCTGTaGAGGCGGCTGCATGGAGAG +
Preference number: 4 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSITLHGL*RRLHGE
Trigger: CTCTCCATGCAGCCGCCTTCACAGACCATGTAGAGT...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR TCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGATCATGGTGGCCAAAATaGGAGCCAGGCAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRSWWPK*EPGNQP
Trigger: TGGCTGATTGCCTGGCTCTCATTTTGGCCACCATGA...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAGAGCTGCTCAACAACTaGATGGACTGCTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGELLNN*MDCLVR
Trigger: CCTCACCAAGCAGTCCATTCAGTTGTTGAGCAGCTC...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAAGTTCAAATACCATTTaGGACAGTACTTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGSSNTI*DSTLGF
Trigger: AAACCCCAAAGTACTGTCTCAAATGGTATTTGAACT...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GCACACTTTACAGCTTTATTAGCAGCAGCTATATGTAAAGGGGTTTGCCAATTTCCTGGTCACGGAGTTTaGGGAACGCCATGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: AHFTALLAAAICKGVCQFPGHGV*GTPWRS
Trigger: CGACCGCCATGGCGTTCCTCAAACTCCGTGACCAGG...AAATTGGCAAACCCCTTTACATATAGCTGCTGCTAATAAAGCTGTAAAGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS-3UTR GCA 90 bp ACAAGTATTTTCACCCGTATTGCACCCAGTCAGCTGGTTTTTAATTCTAATAGTTCTCCTTCCCTCTGCTaGCTGCCCTACCCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: TSIFTRIAPSQLVFNSNSSPSLC*LPYPPL
Trigger: CAGCGGCGGGTAGGGCAGGCAGCAGAGGGAAGGAGA...ACTATTAGAATTAAAAACCAGCTGACTGGGTGCAATACGGGTGAAAATACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399451.6
CDS-3UTR GCA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGATATGTAAAGGGGTTTaGCAATTTTTGTCTCGAGCA +
Preference number: 4 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRICKGV*QFLSRA
Trigger: TGCTCGAGACAAAAATTGGCAAACCCCTTTACATAT...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGGTGACCCATATATGCTaGCCAATGGATAGCACGCCT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLVTHIC*PMDSTP
Trigger: AGGCGTGCTATCCATTGGGCAGCATATATGGGTCAC...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCATGGCCATACCGTGCTaGTATGTGCAAAGGGGTATT +
Preference number: 4 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCMAIPC*YVQRGI
Trigger: AATACCCCTTTGCACATAGCAGCACGGTATGGCCAT...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGACTCATGGCCATACCGTaGTGCTATGTGCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGLMAIP*CYVQRG
Trigger: ACCCCTTTGCACATAGCAGCACGGTATGGCCATGAG...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCATGTATGCCACGCTTTaGAGTGTCAGCACCACTTGT +
Preference number: 4 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCMYATL*SVSTTC
Trigger: ACAAGTGGTGCTGACACTGCAAAGCGTGGCATACAT...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGACAGGCACTGGTAATTaGAGTTGGCAGCAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLTGTGN*SWQQRS
Trigger: ACTACGCTGCTGCCAACTGCAATTACCAGTGCCTGT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTCATAGTGCAGGGGTGTaGAGCCTCTTTCATCAAGGT +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLHSAGV*SLFHQG
Trigger: ACCTTGATGAAAGAGGCTGCACACCCCTGCACTATG...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCATAGTGCAGGGGTGTaGAGCCTCTTTCATCAAGGT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLHSAGV*SLFHQG
Trigger: ACCTTGATGAAAGAGGCTGCACACCCCTGCACTATG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTCATAGTGCAGGGGTGTaGAGCCTCTTTCATCAAGGT +
Preference number: 4 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGHSAGV*SLFHQG
Trigger: ACCTTGATGAAAGAGGCTGCACACCCCTGCACTATG...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACGTAACTGCCCCTCTATaGAACGCTGTCCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADVTAPL*NAVLPH
Trigger: GTGGGGAAGGACAGCGTTGCATAGAGGGGCAGTTAC...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTGTAACTGCCCCTCTATaGAACGCTGTCCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GKITLVEGTPAFVKRLETVTAPL*NAVLPH
Trigger: GTGGGGAAGGACAGCGTTGCATAGAGGGGCAGTTAC...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTTTCGGGCAGCAACATaGAGAGGTGTTTGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDFRAAT*RGVCKA
Trigger: AGCCTTGCAAACACCTCTGCATGTTGCTGCCCGAAA...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGTACTGCAAGCACACTTaGTCCTTTTCCCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGYCKHT*SFSQKF
Trigger: GAACTTTTGGGAAAAGGAGCAAGTGTGCTTGCAGTA...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAAGGAAATTTCTACGGTaGTGTGTTCATTCATTCAAG +
Preference number: 4 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGRKFLR*CVHSFK
Trigger: CTTGAATGAATGAACACAGCACCGTAGAAATTTCCT...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTTGATCAGCAGCTCATaGCCATACCGTGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLISSS*PYRAAM
Trigger: CATAGCAGCACGGTATGGCCATGAGCTGCTGATCAA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGACTGGTAATTGCAGTTaGCAGCAGCGTAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLTGNCS*QQRSAV
Trigger: CACTGCACTACGCTGCTGCCAACTGCAATTACCAGT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCTCCACACATTCAACATaGCCCTTAAAAGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQASTHST*PLKAAR
Trigger: TCTTGCAGCTTTTAAGGGCCATGTTGAATGTGTGGA...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGGTCCCCAATTGTTCCTaGCACTGCAAAACCAAATTA +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGVPNCS*HCKTKL
Trigger: TAATTTGGTTTTGCAGTGCCAGGAACAATTGGGGAC...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCATCTGCTTTCTCTCATaGTTTAATACAGCATTGGAA +
Preference number: 4 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFICFLS*FNTALE
Trigger: TTCCAATGCTGTATTAAACCATGAGAGAAAGCAGAT...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGGGGTTTCCCTTCATTaGGTGCAGACCAAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLGVSLH*VQTKGS
Trigger: ACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCC...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR CAA 72 bp ATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATaGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: IPFETVLWGFPS*GADQRKWLSWG
Trigger: CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGGCTGGTCACGGAGTTTaGGGAACGCCATGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQAGHGV*GTPWRS
Trigger: CGACCGCCATGGCGTTCCTCAAACTCCGTGACCAGC...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000412318.5
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCAATGCTCCATGTGTTaGTGCAGCAGCAAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLQCSMC*CSSKVQ
Trigger: TTGCACTTTGCTGCTGCATCAACACATGGAGCATTG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCCTTTACTCTTCATATTaGCATCGGCCCCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCLYSSY*HRPHCQ
Trigger: TTGGCAATGGGGCCGATGTCAATATGAAGAGTAAAG...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTGGATAATGGTTTGTaGTCGGGAGAATCTACCGTG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLDNGL*SGESTV
Trigger: CACGGTAGATTCTCCCGATCACAAACCATTATCCAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATTCACACTTGCTCCTaGTCCCACAAGAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLIHTCS*SHKSKQ
Trigger: CTGTTTGCTCTTGTGGGATCAGGAGCAAGTGTGAAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGCCATCTGTGTCTaGTGTAGCTGCATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSLAICV*CSCIVQ
Trigger: CTGCACTATGCAGCTACATCAGACACAGATGGCAAG...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTTGAGCATTATGGCTaGGCAGCAGCTGTAAACACT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLEHYG*AAAVNT
Trigger: AGTGTTTACAGCTGCTGCTCAGCCATAATGCTCAAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCGAGCTGCTCAACAACTaGATGGACTGCTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTELLNN*MDCLVR
Trigger: CCTCACCAAGCAGTCCATTCAGTTGTTGAGCAGCTC...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTTATAGCTTGCACCAGTaGTGGCAGAGATCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLYSLHQ*WQRSEL
Trigger: TAGCTCAGATCTCTGCCATCACTGGTGCAAGCTATA...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATGGCCATACCGTGCTaGTATGTGCAAAGGGGTATT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLMAIPC*YVQRGI
Trigger: AATACCCCTTTGCACATAGCAGCACGGTATGGCCAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATGTATGCCACGCTTTaGAGTGTCAGCACCACTTGT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLMYATL*SVSTTC
Trigger: ACAAGTGGTGCTGACACTGCAAAGCGTGGCATACAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGACTGCGTTGTATCCTTaGTTATCACGGATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLTALYP*LSRIPG
Trigger: TCCAGGGATCCGTGATAAGCAAGGATACAACGCAGT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGATCTTGAATATCCACTaGATTCTGTGGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRILNIH*ILWFCI
Trigger: AATGCAGAACCACAGAATGCAGTGGATATTCAAGAT...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGGCAAGCCCAGTGAAGTaGCGTATATCCATGATTGTC +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLASPVK*RISMIV
Trigger: GACAATCATGGATATACGGCACTTCACTGGGCTTGC...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCAGACATGGCAGAATGTaGGAGATTCATCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCRHGRM*EIHPSN
Trigger: GTTGGAAGGATGAATCTCGCACATTCTGCCATGTCT...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGTTAAAGGAGGTCATTTaGTATTACCACCATTTCACC +
Preference number: 4 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRLKEVI*YYHHFT
Trigger: GGTGAAATGGTGGTAATAGCAAATGACCTCCTTTAA...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGATTGATCAGCAGCTCATaGCCATACCGTGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGLISSS*PYRAAM
Trigger: CATAGCAGCACGGTATGGCCATGAGCTGCTGATCAA...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTTAAGGCTGCCAAATaGAGGGGGAACATTCCATGT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLKAAK*RGNIPC
Trigger: ACATGGAATGTTCCCCCTCCATTTGGCAGCCTTAAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGCCTGCCAAAATCATCTaGGGTATCTATATCAAATCC +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGPAKII*GIYIKS
Trigger: GGATTTGATATAGATACCCCAGATGATTTTGGCAGG...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGAGCAGCGTAGTGCAGTaGAGATCTCCCAAATTTGTC +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLSSVVQ*RSPKFV
Trigger: GACAAATTTGGGAGATCTCCACTGCACTACGCTGCT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCTTCCTTTTGAATCTGTaGCGTTCACAATGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCFLLNL*RSQCWH
Trigger: GTGCCAGCATTGTGAACGCCACAGATTCAAAAGGAA...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTGTGAAGGCGGCTGCATaGAGAGGAGTTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSVKAAA*RGVLPF
Trigger: AAAAGGAAGAACTCCTCTCCATGCAGCCGCCTTCAC...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTGTAAACACTCTACATaGTCTGTGAAGGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLCKHST*SVKAAA
Trigger: TGCAGCCGCCTTCACAGACCATGTAGAGTGTTTACA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCCAGCCACATCCTTATTaGGAGCACAGGCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTQPHPY*EHRPKL
Trigger: CAGCTTTGGCCTGTGCTCCCAATAAGGATGTGGCTG...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAAACCTTTCAGTTATTTaGTCCTTTTGCAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: SWRTDPGPKTEVTGREASNLSVI*SFCNLL
Trigger: CAGCAAATTGCAAAAGGACCAAATAACTGAAAGGTT...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCTCAAATGAGTCCTTCTaGAAATCACTTCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQASNESF*KSLQQR
Trigger: TCTCTGCTGAAGTGATTTCCAGAAGGACTCATTTGA...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACAGGAAGTGGTTAAGCTaGGGGGCAGACTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADRKWLS*GADSHR
Trigger: TCTGTGAGAGTCTGCCCCCCAGCTTAACCACTTCCT...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CTGCATGATGTAATGCAGTCCTCCCTGCTCGATCAGATACGTTTACATTACTCACCACTGAAAGCTGCATaGTGTAATGCAGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LHDVMQSSLLDQIRLHYSPLKAA*CNAVLP
Trigger: AGGGAGGACTGCATTACATCATGCAGCTTTCAGTGG...TGAGTAATGTAAACGTATCTGATCGAGCAGGGAGGACTGCATTACATCATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS-3UTR TCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCCACTGAAAGCTGCATaGTGTAATGCAGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADPLKAA*CNAVLP
Trigger: AGGGAGGACTGCATTACATCATGCAGCTTTCAGTGG...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTCTCACCATGTCCACTaGAAGCTGCATGATGTAATG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLSHHVH*KLHDVM
Trigger: CATTACATCATGCAGCTTTCAGTGGACATGGTGAGA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTTTACTCTTCATATTaGCATCGGCCCCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLYSSY*HRPHCQ
Trigger: TTGGCAATGGGGCCGATGTCAATATGAAGAGTAAAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTGGATAATGGTTTGTaGTCGGGAGAATCTACCGTG +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSLDNGL*SGESTV
Trigger: CACGGTAGATTCTCCCGATCACAAACCATTATCCAG...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCGTAAGCATTCTGAATaGCCATTTGTTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLRKHSE*PFVAAA
Trigger: TGCAGCAGCAACAAATGGTCATTCAGAATGCTTACG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTAGTCTGTGTGCCCGTTaGGAACAGATAGCATCAGAG +
Preference number: 4 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSISLCAR*EQIASE
Trigger: CTCTGATGCTATCTGTTCTCAACGGGCACACAGACT...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR TCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACAGTGCCGTATATCCATaGTTGTCTGCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADSAVYP*LSAVAG
Trigger: TCCAGCCACAGCAGACAATCATGGATATACGGCACT...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTAAGGCACTAGTTTCATaGCCCTTGCTACAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGKALVS*PLLQAK
Trigger: TTTGGCTTGTAGCAAGGGTCATGAAACTAGTGCCTT...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGTTCCACAAAGAATTCTaGCATCAATGTGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGFHKEF*HQCVFL
Trigger: GAGGAAAACACATTGATGTCAGAATTCTTTGTGGAA...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR TCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGGGAATCTTGATGTACTaGAAGAGTGCAAGTAAATAC +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGGILMY*KSASKY
Trigger: GTATTTACTTGCACTCTTTCAGTACATCAAGATTCC...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR TCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACGTGATGGCAGAGATCTaGGCTACTTCTCGGGATGTA +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADVMAEI*ATSRDV
Trigger: TACATCCCGAGAAGTAGCTCAGATCTCTGCCATCAC...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624145.3
CDS-3UTR GCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACGTGACCCATATATGCTaGCCAATGGATAGCACGCCT +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADVTHIC*PMDSTP
Trigger: AGGCGTGCTATCCATTGGGCAGCATATATGGGTCAC...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTAATGTGACCCATATATaGTGCCCAATGGATAGCACG +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLNVTHI*CPMDST
Trigger: CGTGCTATCCATTGGGCAGCATATATGGGTCACATT...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGAATGTGACCCATATATaGTGCCCAATGGATAGCACG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLNVTHI*CPMDST
Trigger: CGTGCTATCCATTGGGCAGCATATATGGGTCACATT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGGTCACTTCAGCTCCATaGGACACAAGCAATTTCACT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLVTSAP*DTSNFT
Trigger: AGTGAAATTGCTTGTGTCGCATGGAGCTGAAGTGAC...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACGTCACTTCAGCTCCATaGGACACAAGCAATTTCACT +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDVTSAP*DTSNFT
Trigger: AGTGAAATTGCTTGTGTCGCATGGAGCTGAAGTGAC...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTCCACTAGAGGCTGCTaGATGAAGAGGTGTATAAGA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLSTRGC*MKRCIR
Trigger: TCTTATACACCTCTTCATGCAGCAGCCTCTAGTGGA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCATTCCACTAGAGGCTaGTGCATGAAGAGGTGTATA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLHSTRG*CMKRCI
Trigger: TATACACCTCTTCATGCAGCAGCCTCTAGTGGAATG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTACCGTGCTGCTATGTaGAAAGGGGTATTTCCATTC +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLYRAAM*KGVFPF
Trigger: GAATGGAAATACCCCTTTGCACATAGCAGCACGGTA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAATGGCCATACCGTGCTaGTATGTGCAAAGGGGTATT +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGMAIPC*YVQRGI
Trigger: AATACCCCTTTGCACATAGCAGCACGGTATGGCCAT...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTGCAAGCCCAGTGAAGTaGCGTATATCCATGATTGTC +
Preference number: 4 (lower is better)
Translates to: VESLGSVQGGKITLVEGTASPVK*RISMIV
Trigger: GACAATCATGGATATACGGCACTTCACTGGGCTTGC...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTGTCTGTGAAGGCGGCTaGATGGAGAGGAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NNTGVVQIPFETVLWGFPVCEGG*MERSSS
Trigger: GGAAGAACTCCTCTCCATGCAGCCGCCTTCACAGAC...AGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAAGGTGTTTGCAAGGCTaGGTTGGTTGCATTGATGAG +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRRCLQG*VGCIDE
Trigger: CTCATCAATGCAACCAACGCAGCCTTGCAAACACCT...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTAGGTGTTTGCAAGGCTaGGTTGGTTGCATTGATGAG +
Preference number: 4 (lower is better)
Translates to: VESLGSVQGGKITLVEGTRCLQG*VGCIDE
Trigger: CTCATCAATGCAACCAACGCAGCCTTGCAAACACCT...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCTATTTTCACCCGTATTaGACCCAGTCAGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCYFHPY*TQSAGF
Trigger: AAAACCAGCTGACTGGGTGCAATACGGGTGAAAATA...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGATTTCCATAGGCATTTaGTTCATTCATATCAACTCC +
Preference number: 4 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRISIGI*FIHINS
Trigger: GGAGTTGATATGAATGAACCAAATGCCTATGGAAAT...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTTTGATCAGCAGCTCATaGCCATACCGTGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: GKITLVEGTPAFVKRLETLISSS*PYRAAM
Trigger: CATAGCAGCACGGTATGGCCATGAGCTGCTGATCAA...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTAAGGCTGCCAAATaGAGGGGGAACATTCCATGT +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSLKAAK*RGNIPC
Trigger: ACATGGAATGTTCCCCCTCCATTTGGCAGCCTTAAG...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACTTAAGGCTGCCAAATaGAGGGGGAACATTCCATGT +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRLKAAK*RGNIPC
Trigger: ACATGGAATGTTCCCCCTCCATTTGGCAGCCTTAAG...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTAGCAGCGTAGTGCAGTaGAGATCTCCCAAATTTGTC +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSSSVVQ*RSPKFV
Trigger: GACAAATTTGGGAGATCTCCACTGCACTACGCTGCT...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCTACACATTCTTCATaGCCTGTAACTGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDSTHSS*PVTAPL
Trigger: TAGAGGGGCAGTTACAGGCCATGAAGAATGTGTAGA...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTCTACACATTCTTCATaGCCTGTAACTGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLSTHSS*PVTAPL
Trigger: TAGAGGGGCAGTTACAGGCCATGAAGAATGTGTAGA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATTGTCTGCTGTGGCTaGATTTGCATCCATAGATGC +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLIVCCG*ICIHRC
Trigger: GCATCTATGGATGCAAATCCAGCCACAGCAGACAAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCCACGGCACAATGCAATaGACTAAAAGCATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCHGTMQ*TKSISF
Trigger: GAAGGAAATGCTTTTAGTCCATTGCATTGTGCCGTG...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGATGTAAACACTCTACATaGTCTGTGAAGGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGCKHST*SVKAAA
Trigger: TGCAGCCGCCTTCACAGACCATGTAGAGTGTTTACA...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTAGCACAGGCCAAAGCTaGGGTATAGCCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSSTGQS*GIAIFI
Trigger: GATGAAAATGGCTATACCCCAGCTTTGGCCTGTGCT...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTTCACTACTTCAATGTaGCCCATATATGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLFTTSM*PIYAAQ
Trigger: TTGGGCAGCATATATGGGTCACATTGAAGTAGTGAA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAATGCTCCATGTGTTaGTGCAGCAGCAAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADQCSMC*CSSKVQ
Trigger: TTGCACTTTGCTGCTGCATCAACACATGGAGCATTG...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACTTTACTCTTCATATTaGCATCGGCCCCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRLYSSY*HRPHCQ
Trigger: TTGGCAATGGGGCCGATGTCAATATGAAGAGTAAAG...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTGACCATAAGCAGCTaGATAATGAACTGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLVTISS*IMNCVV
Trigger: TACAACGCAGTTCATTATTCAGCTGCTTATGGTCAC...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGGTGACCATAAGCAGCTaGATAATGAACTGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLVTISS*IMNCVV
Trigger: TACAACGCAGTTCATTATTCAGCTGCTTATGGTCAC...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGAAGATTGAGGCTCCCTaGTTAATGAGTACATCCACA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLKIEAP*LMSTST
Trigger: TGTGGATGTACTCATTAATCAGGGAGCCTCAATCTT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTTTGTTGCTGCTGCATaGATAGGTGTCCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLFVAAA*IGVLFK
Trigger: TTTGAAGAGGACACCTATTCATGCAGCAGCAACAAA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCGTAAGCATTCTGAATaGCCATTTGTTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSRKHSE*PFVAAA
Trigger: TGCAGCAGCAACAAATGGTCATTCAGAATGCTTACG...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCGTAAGCATTCTGAATaGCCATTTGTTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VESLGSVQGGKITLVEGTRKHSE*PFVAAA
Trigger: TGCAGCAGCAACAAATGGTCATTCAGAATGCTTACG...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTCCTTTGTTCAGCAATaGGTAAACACAGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLSFVQQ*VNTVCV
Trigger: CACACAGACTGTGTTTACTCATTGCTGAACAAAGGA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTTTTCCCAAAAGTTCCTaGACCACCATTGTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSFPKSS*TTIVSP
Trigger: TGGGCTAACAATGGTGGTTCAGGAACTTTTGGGAAA...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAGCAAAGCTTCAAAGCTaGCTGTTTTTGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRAKLQS*LFLRCW
Trigger: CCAACACCTCAAAAACAGTCAGCTTTGAAGCTTTGC...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACTTTGAAGCTTTACTGTaGGAACTCCCTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADFEALL*ELPPPQ
Trigger: CTGAGGAGGAGGGAGTTCTCACAGTAAAGCTTCAAA...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGGTTAGAGACTGGATaGACCTCAGGTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGRLETG*TSGLFQ
Trigger: TTGAAAGAGACCTGAGGTTCATCCAGTCTCTAACCT...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCGTTAAATATAGCTTaGACCAGTGATGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VESLGSVQGGKITLVEGTPLNIA*TSDGWS
Trigger: TGACCAGCCATCACTGGTGCAAGCTATATTTAACGG...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000412318.5
CDS-3UTR GCA 90 bp ACAGCTTTATTAGCAGCAGCTATATGTAAAGGGGTTTGCCAATTTTTGTCTCGAATCTCCAAGGTAAGCTaGGGCGTGCAATGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: TALLAAAICKGVCQFLSRISKVS*GVQWGS
Trigger: CGAACCCCATTGCACGCCGCAGCTTACCTTGGAGAT...TCGAGACAAAAATTGGCAAACCCCTTTACATATAGCTGCTGCTAATAAAGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS-3UTR GCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTGTCACTTCAGCTCCATaGGACACAAGCAATTTCACT +
Preference number: 4 (lower is better)
Translates to: VESLGSVQGGKITLVEGTVTSAP*DTSNFT
Trigger: AGTGAAATTGCTTGTGTCGCATGGAGCTGAAGTGAC...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCATTCCACTAGAGGCTaGTGCATGAAGAGGTGTATA +
Preference number: 4 (lower is better)
Translates to: VESLGSVQGGKITLVEGTHSTRG*CMKRCI
Trigger: TATACACCTCTTCATGCAGCAGCCTCTAGTGGAATG...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCATGGCCATACCGTGCTaGTATGTGCAAAGGGGTATT +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTMAIPC*YVQRGI
Trigger: AATACCCCTTTGCACATAGCAGCACGGTATGGCCAT...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCATGTAGACAAGTCCTaGCAAAATCATCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLHVDKS*QNHLGY
Trigger: ATACCCCAGATGATTTTGGCAGGACTTGTCTACATG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGCTTTTTATTAAAGTCTaGACCAGTATTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGLFIKV*TSIQQK
Trigger: CTTCTGCTGAATACTGGTGCAGACTTTAATAAAAAG...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTACTGCGTTGTATCCTTaGTTATCACGGATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSITALYP*LSRIPG
Trigger: TCCAGGGATCCGTGATAAGCAAGGATACAACGCAGT...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTACCAACACTTCCAGTaGTTGATGGTGACCATGATA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLYQHFQ*LMVTMI
Trigger: TATCATGGTCACCATCAAGCACTGGAAGTGTTGGTA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACACCATTTGTTGCTGCTaGATGAATAGGTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDTICCC*MNRCPL
Trigger: AAGAGGACACCTATTCATGCAGCAGCAACAAATGGT...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGACCATTTGTTGCTGCTaGATGAATAGGTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLTICCC*MNRCPL
Trigger: AAGAGGACACCTATTCATGCAGCAGCAACAAATGGT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTACCATTTGTTGCTGCTaGATGAATAGGTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGTICCC*MNRCPL
Trigger: AAGAGGACACCTATTCATGCAGCAGCAACAAATGGT...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCGCAAGCCCAGTGAAGTaGCGTATATCCATGATTGTC +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTASPVK*RISMIV
Trigger: GACAATCATGGATATACGGCACTTCACTGGGCTTGC...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGACTGTGGCGTTCACAATaGTGGCACCTAATGTATCAA +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGLWRSQ*WHLMYQ
Trigger: TTGATACATTAGGTGCCAGCATTGTGAACGCCACAG...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACGCCATTTTCATCTACTaGAAGCACACTTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDAIFIY*KHTCSF
Trigger: AAAGGAGCAAGTGTGCTTGCAGTAGATGAAAATGGC...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCCCACTGTCATTAAAATaGATATTCACCTTCCTACTA +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQAPLSLK*IFTFLL
Trigger: TAGTAGGAAGGTGAATATGCATTTTAATGACAGTGG...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGATTTCCCTTCATTGGGTaGAGACCAAAGGAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGFPFIG*RPKEVV
Trigger: AACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAA...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACATATATGCTGCCCAATaGATAGCACGCCTATCTTTC +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDIYAAQ*IARLSF
Trigger: GAAAGATAGGCGTGCTATCCATTGGGCAGCATATAT...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATATATGCTGCCCAATaGATAGCACGCCTATCTTTC +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLIYAAQ*IARLSF
Trigger: GAAAGATAGGCGTGCTATCCATTGGGCAGCATATAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACATTACAGCTCCACTCTaGATAATGGTTTGTGATCGG +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDITAPL*IMVCDR
Trigger: CCGATCACAAACCATTATCCAGAGTGGAGCTGTAAT...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATTACAGCTCCACTCTaGATAATGGTTTGTGATCGG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLITAPL*IMVCDR
Trigger: CCGATCACAAACCATTATCCAGAGTGGAGCTGTAAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTCTTAAGGCTGCCAAATaGAGGGGGAACATTCCATGT +
Preference number: 4 (lower is better)
Translates to: GKITLVEGTPAFVKRLETLKAAK*RGNIPC
Trigger: ACATGGAATGTTCCCCCTCCATTTGGCAGCCTTAAG...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTCCACACATTCAACATaGCCCTTAAAAGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLSTHST*PLKAAR
Trigger: TCTTGCAGCTTTTAAGGGCCATGTTGAATGTGTGGA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTTCCACACATTCAACATaGCCCTTAAAAGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLSTHST*PLKAAR
Trigger: TCTTGCAGCTTTTAAGGGCCATGTTGAATGTGTGGA...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCTTTCCTTCCGTTTTCTaGAAAACTTCCTGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQAFPSVF*KTSCSK
Trigger: TTTAGAACAGGAAGTTTTCCAGAAAACGGAAGGAAA...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTCACGGCACAATGCAATaGACTAAAAGCATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGHGTMQ*TKSISF
Trigger: GAAGGAAATGCTTTTAGTCCATTGCATTGTGCCGTG...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCTGGCGTTCACAATGCTaGCACCTAATGTATCAATTA +
Preference number: 4 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCWRSQC*HLMYQL
Trigger: TAATTGATACATTAGGTGCCAGCATTGTGAACGCCA...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACTGTAAACACTCTACATaGTCTGTGAAGGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADCKHST*SVKAAA
Trigger: TGCAGCCGCCTTCACAGACCATGTAGAGTGTTTACA...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCTCCCCCAACCCATGGTaGGGACACAAAAGTAACATA +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTSPNPW*GHKSNI
Trigger: TATGTTACTTTTGTGTCCCCACCATGGGTTGGGGGA...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp GTAAGCTGCGGCGTGCAATGGGGTTCGCTTTTCATTGTCCTGAAAGTTAACATCACTATTTTCCTCTGGTaGAGGCAGTTGTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: VSCGVQWGSLFIVLKVNITIFLW*RQLYCF
Trigger: GAAACAGTACAACTGCCTCCACCAGAGGAAAATAGT...GATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS-3UTR TCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTTGTTGCTCTATTATCTaGATCACTCAGCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLCCSII*ITQHVC
Trigger: ACAGACATGCTGAGTGATTCAGATAATAGAGCAACA...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTGTTGCTCTATTATCTaGATCACTCAGCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLCCSII*ITQHVC
Trigger: ACAGACATGCTGAGTGATTCAGATAATAGAGCAACA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTAAGATTGAGGCTCCCTaGTTAATGAGTACATCCACA +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSKIEAP*LMSTST
Trigger: TGTGGATGTACTCATTAATCAGGGAGCCTCAATCTT...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGATTTGTTGCTGCTGCATaGATAGGTGTCCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGFVAAA*IGVLFK
Trigger: TTTGAAGAGGACACCTATTCATGCAGCAGCAACAAA...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTCGTAAGCATTCTGAATaGCCATTTGTTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GKITLVEGTPAFVKRLETRKHSE*PFVAAA
Trigger: TGCAGCAGCAACAAATGGTCATTCAGAATGCTTACG...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTCACTTAGCACCATGTTaGAGTAATGCATCTACACAT +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLHLAPC*SNASTH
Trigger: ATGTGTAGATGCATTACTTCAACATGGTGCTAAGTG...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCACTTAGCACCATGTTaGAGTAATGCATCTACACAT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLHLAPC*SNASTH
Trigger: ATGTGTAGATGCATTACTTCAACATGGTGCTAAGTG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR TCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTAGGAGTTCTTCCTTTTaGATCTGTGGCGTTCACAAT +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSRSSSF*ICGVHN
Trigger: ATTGTGAACGCCACAGATTCAAAAGGAAGAACTCCT...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAAGGAGTTCTTCCTTTTaGATCTGTGGCGTTCACAAT +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRRSSSF*ICGVHN
Trigger: ATTGTGAACGCCACAGATTCAAAAGGAAGAACTCCT...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACCACTTAGAGATCTCCTaGACTAAATGGCATTGTTTG +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDHLEIS*TKWHCL
Trigger: CAAACAATGCCATTTAGTTCAGGAGATCTCTAAGTG...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTATAGCTTGCACCAGTaGTGGATATCTTACCAATAC +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLYSLHQ*WISYQY
Trigger: GTATTGGTAAGATATCCATCACTGGTGCAAGCTATA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGAATCTCCAAGGTAAGCTaGGGCGTGCAATGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRISKVS*GVQWGS
Trigger: CGAACCCCATTGCACGCCGCAGCTTACCTTGGAGAT...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACAATGTGACCCATATATaGTGCCCAATGGATAGCACG +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADNVTHI*CPMDST
Trigger: CGTGCTATCCATTGGGCAGCATATATGGGTCACATT...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACTCCACTAGAGGCTGCTaGATGAAGAGGTGTATAAGA +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADSTRGC*MKRCIR
Trigger: TCTTATACACCTCTTCATGCAGCAGCCTCTAGTGGA...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGGATGCAGCAGCAAAGTaGAAAGGAGTAAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLDAAAK*KGVNPF
Trigger: AAAAGGATTTACTCCTTTGCACTTTGCTGCTGCATC...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTTACCGTGCTGCTATGTaGAAAGGGGTATTTCCATTC +
Preference number: 4 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSIYRAAM*KGVFPF
Trigger: GAATGGAAATACCCCTTTGCACATAGCAGCACGGTA...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACTACCGTGCTGCTATGTaGAAAGGGGTATTTCCATTC +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADYRAAM*KGVFPF
Trigger: GAATGGAAATACCCCTTTGCACATAGCAGCACGGTA...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTACAGGCACTGGTAATTaGAGTTGGCAGCAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: NNTGVVQIPFETVLWGFPTGTGN*SWQQRS
Trigger: ACTACGCTGCTGCCAACTGCAATTACCAGTGCCTGT...AGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCGTAACTGCCCCTCTATaGAACGCTGTCCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFVTAPL*NAVLPH
Trigger: GTGGGGAAGGACAGCGTTGCATAGAGGGGCAGTTAC...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTCTGTGGCGTTCACAATaGTGGCACCTAATGTATCAA +
Preference number: 4 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSILWRSQ*WHLMYQ
Trigger: TTGATACATTAGGTGCCAGCATTGTGAACGCCACAG...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTGTTTGTCCATTTTCTaGAGCCATCATAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLCLSIF*SHHKRC
Trigger: ACACCTCTTATGATGGCTGCAGAAAATGGACAAACA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTCAAGGCTGCGTTGGTTaGATTGATGAGGTTTCTATC +
Preference number: 4 (lower is better)
Translates to: GKITLVEGTPAFVKRLETQGCVG*IDEVSI
Trigger: GATAGAAACCTCATCAATGCAACCAACGCAGCCTTG...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTTACTGCAAGCACACTTaGTCCTTTTCCCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSYCKHT*SFSQKF
Trigger: GAACTTTTGGGAAAAGGAGCAAGTGTGCTTGCAGTA...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTAGACATGGCAGAATGTaGGAGATTCATCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: GKITLVEGTPAFVKRLETRHGRM*EIHPSN
Trigger: GTTGGAAGGATGAATCTCGCACATTCTGCCATGTCT...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp ATCTCCAAGGTAAGCTGCGGCGTGCAATGGGGTTCGCTTTTCATTGTCCTGAAACCGTTAAATATAGCTTaGACCAGTGATGGCATAATA +
Preference number: 4 (lower is better)
Translates to: ISKVSCGVQWGSLFIVLKPLNIA*TSDGII
Trigger: TATTATGCCATCACTGGTGCAAGCTATATTTAACGG...TTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS-3UTR CCA 90 bp GCACACTTTACAGCTTTATTAGCAGCAGCTATATGTAAAGGGGTTTGCCAATTTAGCTGCGGCGTGCAATaGGGTTCGCTTTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: AHFTALLAAAICKGVCQFSCGVQ*GSLFIV
Trigger: GACAATGAAAAGCGAACCCCATTGCACGCCGCAGCT...AAATTGGCAAACCCCTTTACATATAGCTGCTGCTAATAAAGCTGTAAAGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCCTGCCAAAATCATCTaGGGTATCTATATCAAATCC +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLPAKII*GIYIKS
Trigger: GGATTTGATATAGATACCCCAGATGATTTTGGCAGG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGATCCACACATTCAACATaGCCCTTAAAAGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRSTHST*PLKAAR
Trigger: TCTTGCAGCTTTTAAGGGCCATGTTGAATGTGTGGA...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTTCCCCACTTATCTTTaGCATCTACATTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLFPTYL*HLHLLL
Trigger: AAGGAGCAAATGTAGATGCCAAAGATAAGTGGGGAA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTTCCCCACTTATCTTTaGCATCTACATTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDFPTYL*HLHLLL
Trigger: AAGGAGCAAATGTAGATGCCAAAGATAAGTGGGGAA...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTATTGTCTGCTGTGGCTaGATTTGCATCCATAGATGC +
Preference number: 4 (lower is better)
Translates to: GKITLVEGTPAFVKRLETIVCCG*ICIHRC
Trigger: GCATCTATGGATGCAAATCCAGCCACAGCAGACAAT...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACTTCCTTTTGAATCTGTaGCGTTCACAATGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADFLLNL*RSQCWH
Trigger: GTGCCAGCATTGTGAACGCCACAGATTCAAAAGGAA...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAGTCCCCAATTGTTCCTaGCACTGCAAAACCAAATTA +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRVPNCS*HCKTKL
Trigger: TAATTTGGTTTTGCAGTGCCAGGAACAATTGGGGAC...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTTGGAAGTGTTCAAGGTaGAAAGATCACCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VESLGSVQGGKITLVEGTWKCSR*KDHPCR
Trigger: TCTACAAGGGTGATCTTTCCACCTTGAACACTTCCA...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAAAAGAGAAGACATaGCAGAATGTGCGAGATTCA +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLVKEKT*QNVRDS
Trigger: TGAATCTCGCACATTCTGCCATGTCTTCTCTTTTAC...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGATTTGAGACAGTACTTTaGGGTTTCCCTTCATTGGGT +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGFETVL*GFPSLG
Trigger: ACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAA...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGATTTGAGACAGTACTTTaGGGTTTCCCTTCATTGGGT +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRFETVL*GFPSLG
Trigger: ACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAA...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp ATGCAGTCCTCCCTGCTCGATCAGATACGTTTACATTACTCAGAAGAGGTACCACATACTATTTTCCTCTaGTGGAGGCAGTTGTACTGT +
Preference number: 4 (lower is better)
Translates to: MQSSLLDQIRLHYSEEVPHTIFL*WRQLYC
Trigger: ACAGTACAACTGCCTCCACCAGAGGAAAATAGTATG...TGGTACCTCTTCTGAGTAATGTAAACGTATCTGATCGAGCAGGGAGGACTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS-3UTR TCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTCGCTTTTCATTGTCCTaGAAGTTAACATCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGRFSLS*KLTSSF
Trigger: GAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCG...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACTTCACTACTTCAATGTaGCCCATATATGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADFTTSM*PIYAAQ
Trigger: TTGGGCAGCATATATGGGTCACATTGAAGTAGTGAA...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACGTGACCATAAGCAGCTaGATAATGAACTGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADVTISS*IMNCVV
Trigger: TACAACGCAGTTCATTATTCAGCTGCTTATGGTCAC...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTTGTTGCTCTATTATCTaGATCACTCAGCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSCCSII*ITQHVC
Trigger: ACAGACATGCTGAGTGATTCAGATAATAGAGCAACA...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTTGTTGCTCTATTATCTaGATCACTCAGCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: VESLGSVQGGKITLVEGTCCSII*ITQHVC
Trigger: ACAGACATGCTGAGTGATTCAGATAATAGAGCAACA...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATACTCTACATGGTCTGTaGAGGCGGCTGCATGGAGAG +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNTLHGL*RRLHGE
Trigger: CTCTCCATGCAGCCGCCTTCACAGACCATGTAGAGT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCTCATGGTGGCCAAAATaGGAGCCAGGCAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFSWWPK*EPGNQP
Trigger: TGGCTGATTGCCTGGCTCTCATTTTGGCCACCATGA...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGGAGCTGCTCAACAACTaGATGGACTGCTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQELLNN*MDCLVR
Trigger: CCTCACCAAGCAGTCCATTCAGTTGTTGAGCAGCTC...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATATGTAAAGGGGTTTaGCAATTTTTGTCTCGAGCA +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLICKGV*QFLSRA
Trigger: TGCTCGAGACAAAAATTGGCAAACCCCTTTACATAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACATATGTAAAGGGGTTTaGCAATTTTTGTCTCGAGCA +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDICKGV*QFLSRA
Trigger: TGCTCGAGACAAAAATTGGCAAACCCCTTTACATAT...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGAAGACTTTTTATCCTTaGATGTCACTTCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLKTFYP*MSLQLH
Trigger: ATGGAGCTGAAGTGACATGCAAGGATAAAAAGTCTT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTAAGACTTTTTATCCTTaGATGTCACTTCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLKTFYP*MSLQLH
Trigger: ATGGAGCTGAAGTGACATGCAAGGATAAAAAGTCTT...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCATGTAGACAAGTCCTaGCAAAATCATCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADHVDKS*QNHLGY
Trigger: ATACCCCAGATGATTTTGGCAGGACTTGTCTACATG...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCTACCAACACTTCCAGTaGTTGATGGTGACCATGATA +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTYQHFQ*LMVTMI
Trigger: TATCATGGTCACCATCAAGCACTGGAAGTGTTGGTA...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATCTTGAATATCCACTaGATTCTGTGGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLILNIH*ILWFCI
Trigger: AATGCAGAACCACAGAATGCAGTGGATATTCAAGAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCGGTCCTTTTGCAATTTaGTGTGCACATAATGCCTAC +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTGPFAI*CAHNAY
Trigger: GTAGGCATTATGTGCACAGCAAATTGCAAAAGGACC...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACTATTTTCACCCGTATTaGACCCAGTCAGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADYFHPY*TQSAGF
Trigger: AAAACCAGCTGACTGGGTGCAATACGGGTGAAAATA...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTAGGAAATTTCTACGGTaGTGTGTTCATTCATTCAAG +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLRKFLR*CVHSFK
Trigger: CTTGAATGAATGAACACAGCACCGTAGAAATTTCCT...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCCGTTAAATATAGCTTaGACCAGTGATGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADPLNIA*TSDGRD
Trigger: ATCTCTGCCATCACTGGTGCAAGCTATATTTAACGG...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624145.3
CDS-3UTR CCA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTGATCAGCAGCTCATaGCCATACCGTGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVLISSS*PYRAAM
Trigger: CATAGCAGCACGGTATGGCCATGAGCTGCTGATCAA...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCCTGCCAAAATCATCTaGGGTATCTATATCAAATCC +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSPAKII*GIYIKS
Trigger: GGATTTGATATAGATACCCCAGATGATTTTGGCAGG...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGACCTGCCAAAATCATCTaGGGTATCTATATCAAATCC +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGPAKII*GIYIKS
Trigger: GGATTTGATATAGATACCCCAGATGATTTTGGCAGG...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGGTGAAGGCGGCTGCATaGAGAGGAGTTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGVKAAA*RGVLPF
Trigger: AAAAGGAAGAACTCCTCTCCATGCAGCCGCCTTCAC...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCTGGAAGTGTTCAAGGTaGAAAGATCACCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTWKCSR*KDHPCR
Trigger: TCTACAAGGGTGATCTTTCCACCTTGAACACTTCCA...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAGTAAAAGAGAAGACATaGCAGAATGTGCGAGATTCA +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRVKEKT*QNVRDS
Trigger: TGAATCTCGCACATTCTGCCATGTCTTCTCTTTTAC...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGACGCTTTTCATTGTCCTaGAAGTTAACATCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGRFSLS*KLTSSF
Trigger: GAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCG...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGACCACTGAAAGCTGCATaGTGTAATGCAGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRPLKAA*CNAVLP
Trigger: AGGGAGGACTGCATTACATCATGCAGCTTTCAGTGG...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCTCACCATGTCCACTaGAAGCTGCATGATGTAATG +
Preference number: 4 (lower is better)
Translates to: NNTGVVQIPFETVLWGFPSHHVH*KLHDVM
Trigger: CATTACATCATGCAGCTTTCAGTGGACATGGTGAGA...AGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGCTGGATAATGGTTTGTaGTCGGGAGAATCTACCGTG +
Preference number: 4 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGLDNGL*SGESTV
Trigger: CACGGTAGATTCTCCCGATCACAAACCATTATCCAG...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATCAGAATCGGAGTCGTTaGGCTCATCCACGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNQNRSR*AHPRQC
Trigger: ACACTGACGTGGATGAGCTCAACGACTCCGATTCTG...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAGGAATCTTGATGTACTaGAAGAGTGCAAGTAAATAC +
Preference number: 4 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRGILMY*KSASKY
Trigger: GTATTTACTTGCACTCTTTCAGTACATCAAGATTCC...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR TCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCACTTAGAGATCTCCTaGACTAAATGGCATTGTTTG +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADHLEIS*TKWHCL
Trigger: CAAACAATGCCATTTAGTTCAGGAGATCTCTAAGTG...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGGTGACCCATATATGCTaGCCAATGGATAGCACGCCT +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQVTHIC*PMDSTP
Trigger: AGGCGTGCTATCCATTGGGCAGCATATATGGGTCAC...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCGTGACCCATATATGCTaGCCAATGGATAGCACGCCT +
Preference number: 4 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFVTHIC*PMDSTP
Trigger: AGGCGTGCTATCCATTGGGCAGCATATATGGGTCAC...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTGATGCAGCAGCAAAGTaGAAAGGAGTAAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: GKITLVEGTPAFVKRLETDAAAK*KGVNPF
Trigger: AAAAGGATTTACTCCTTTGCACTTTGCTGCTGCATC...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGATGTATGCCACGCTTTaGAGTGTCAGCACCACTTGT +
Preference number: 4 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGMYATL*SVSTTC
Trigger: ACAAGTGGTGCTGACACTGCAAAGCGTGGCATACAT...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTTTTTATTAAAGTCTaGACCAGTATTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLFIKV*TSIQQK
Trigger: CTTCTGCTGAATACTGGTGCAGACTTTAATAAAAAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR GCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGCATAGTGCAGGGGTGTaGAGCCTCTTTCATCAAGGT +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQHSAGV*SLFHQG
Trigger: ACCTTGATGAAAGAGGCTGCACACCCCTGCACTATG...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATAACATGCAGAGGTGTTTaGAAGGCTGCGTTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYITCRGV*KAALVA
Trigger: TGCAACCAACGCAGCCTTGCAAACACCTCTGCATGT...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGATTTCGGGCAGCAACATaGAGAGGTGTTTGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRFRAAT*RGVCKA
Trigger: AGCCTTGCAAACACCTCTGCATGTTGCTGCCCGAAA...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATTTCCATAGGCATTTaGTTCATTCATATCAACTCC +
Preference number: 4 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLISIGI*FIHINS
Trigger: GGAGTTGATATGAATGAACCAAATGCCTATGGAAAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGACTGGTAATTGCAGTTaGCAGCAGCGTAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQTGNCS*QQRSAV
Trigger: CACTGCACTACGCTGCTGCCAACTGCAATTACCAGT...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGGTGAAGGCGGCTGCATaGAGAGGAGTTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQVKAAA*RGVLPF
Trigger: AAAAGGAAGAACTCCTCTCCATGCAGCCGCCTTCAC...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTAACCTTTCAGTTATTTaGTCCTTTTGCAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGNLSVI*SFCNLL
Trigger: CAGCAAATTGCAAAAGGACCAAATAACTGAAAGGTT...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGGTTTAATACAGCATTaGAAGGCTTTCAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: LLGEVESLGSVQGGKITLGLIQH*KAFRCF
Trigger: AAAACATCTGAAAGCCTTCCAATGCTGTATTAAACC...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTGTAAAAGAGAAGACATaGCAGAATGTGCGAGATTCA +
Preference number: 4 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSIVKEKT*QNVRDS
Trigger: TGAATCTCGCACATTCTGCCATGTCTTCTCTTTTAC...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTTCAAATGAGTCCTTCTaGAAATCACTTCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GKITLVEGTPAFVKRLETSNESF*KSLQQR
Trigger: TCTCTGCTGAAGTGATTTCCAGAAGGACTCATTTGA...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACGCAGACTCTCACAGATaGATTACAAAAGTAATGAAA +
Preference number: 4 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDADSHR*ITKVMK
Trigger: TTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGC...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR CAA 72 bp AAACTCTTCCTCCTAATGCCATCAGATCTCTTAACATaGGCTCACTGTGGGATCTTTCCTCTTAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: KLFLLMPSDLLT*AHCGIFPLRLN
Trigger: ATTCAACCTAAGAGGAAAGATCCCACAGTGAGCCAATGTTAAGAGATCTGATGGCATTAGGAGGAAGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTGCTTCAAAAGTACCTaGACTGCTTCCTCACTACAA +
Preference number: 4 (lower is better)
Translates to: NNTGVVQIPFETVLWGFPCFKST*TASSLQ
Trigger: TTGTAGTGAGGAAGCAGTTCAGGTACTTTTGAAGCA...AGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATATCCATAGATGCTGCTaGCTGCAAAAGGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNIHRCC*LQKGSK
Trigger: CTTGGAGCCCTTTTGCAGTCAGCAGCATCTATGGAT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATAGTGCCGTATATCCATaGTTGTCTGCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNSAVYP*LSAVAG
Trigger: TCCAGCCACAGCAGACAATCATGGATATACGGCACT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGCTTGAGCATTATGGCTaGGCAGCAGCTGTAAACACT +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQLEHYG*AAAVNT
Trigger: AGTGTTTACAGCTGCTGCTCAGCCATAATGCTCAAG...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGATTTGAAGCTTTACTGTaGGAACTCCCTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRFEALL*ELPPPQ
Trigger: CTGAGGAGGAGGGAGTTCTCACAGTAAAGCTTCAAA...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCGACCCTCAATGTATATaGAATCATTTTCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTDPQCI*NHFHWE
Trigger: TTCCCAGTGAAAATGATTTCATATACATTGAGGGTC...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR TCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAGTTCAAATACCATTTaGGACAGTACTTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTSSNTI*DSTLGF
Trigger: AAACCCCAAAGTACTGTCTCAAATGGTATTTGAACT...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACAGTTCAAATACCATTTaGGACAGTACTTTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADSSNTI*DSTLGF
Trigger: AAACCCCAAAGTACTGTCTCAAATGGTATTTGAACT...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGCATTCCACTAGAGGCTaGTGCATGAAGAGGTGTATA +
Preference number: 4 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVHSTRG*CMKRCI
Trigger: TATACACCTCTTCATGCAGCAGCCTCTAGTGGAATG...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTACCAACACTTCCAGTaGTTGATGGTGACCATGATA +
Preference number: 4 (lower is better)
Translates to: NNTGVVQIPFETVLWGFPYQHFQ*LMVTMI
Trigger: TATCATGGTCACCATCAAGCACTGGAAGTGTTGGTA...AGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACATCTTGAATATCCACTaGATTCTGTGGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADILNIH*ILWFCI
Trigger: AATGCAGAACCACAGAATGCAGTGGATATTCAAGAT...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATAAGGTGTTTGCAAGGCTaGGTTGGTTGCATTGATGAG +
Preference number: 4 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYIRCLQG*VGCIDE
Trigger: CTCATCAATGCAACCAACGCAGCCTTGCAAACACCT...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTTCCCTTCATTGGGTaGAGACCAAAGGAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVFPFIG*RPKEVV
Trigger: AACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAA...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAGGAAATTTCTACGGTaGTGTGTTCATTCATTCAAG +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTRKFLR*CVHSFK
Trigger: CTTGAATGAATGAACACAGCACCGTAGAAATTTCCT...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTATTTCCATAGGCATTTaGTTCATTCATATCAACTCC +
Preference number: 4 (lower is better)
Translates to: VESLGSVQGGKITLVEGTISIGI*FIHINS
Trigger: GGAGTTGATATGAATGAACCAAATGCCTATGGAAAT...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGTCTACACATTCTTCATaGCCTGTAACTGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGSTHSS*PVTAPL
Trigger: TAGAGGGGCAGTTACAGGCCATGAAGAATGTGTAGA...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGATTGTCTGCTGTGGCTaGATTTGCATCCATAGATGC +
Preference number: 4 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGIVCCG*ICIHRC
Trigger: GCATCTATGGATGCAAATCCAGCCACAGCAGACAAT...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGAAGCACAGGCCAAAGCTaGGGTATAGCCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRSTGQS*GIAIFI
Trigger: GATGAAAATGGCTATACCCCAGCTTTGGCCTGTGCT...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATCCCCCAACCCATGGTaGGGACACAAAAGTAACATA +
Preference number: 4 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYISPNPW*GHKSNI
Trigger: TATGTTACTTTTGTGTCCCCACCATGGGTTGGGGGA...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTGCAGACTCTCACAGATaGATTACAAAAGTAATGAAA +
Preference number: 4 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSADSHR*ITKVMK
Trigger: TTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGC...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GCACACTTTACAGCTTTATTAGCAGCAGCTATATGTAAAGGGGTTTGCCAATTTTGCTTCAAAAGTACCTaGACTGCTTCCTCACTACAA +
Preference number: 4 (lower is better)
Translates to: AHFTALLAAAICKGVCQFCFKST*TASSLQ
Trigger: TTGTAGTGAGGAAGCAGTTCAGGTACTTTTGAAGCA...AAATTGGCAAACCCCTTTACATATAGCTGCTGCTAATAAAGCTGTAAAGTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS-3UTR TCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGTGCTTCAAAAGTACCTaGACTGCTTCCTCACTACAA +
Preference number: 4 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGCFKST*TASSLQ
Trigger: TTGTAGTGAGGAAGCAGTTCAGGTACTTTTGAAGCA...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATCTCACCATGTCCACTaGAAGCTGCATGATGTAATG +
Preference number: 4 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYISHHVH*KLHDVM
Trigger: CATTACATCATGCAGCTTTCAGTGGACATGGTGAGA...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp ACAAGTATTTTCACCCGTATTGCACCCAGTCAGCTGGTTTTTAATTCTAATAGTTCTCACCATGTCCACTaGAAGCTGCATGATGTAATG +
Preference number: 4 (lower is better)
Translates to: TSIFTRIAPSQLVFNSNSSHHVH*KLHDVM
Trigger: CATTACATCATGCAGCTTTCAGTGGACATGGTGAGA...ACTATTAGAATTAAAAACCAGCTGACTGGGTGCAATACGGGTGAAAATACTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR TCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATCAATGCTCCATGTGTTaGTGCAGCAGCAAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNQCSMC*CSSKVQ
Trigger: TTGCACTTTGCTGCTGCATCAACACATGGAGCATTG...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATCAATGCTCCATGTGTTaGTGCAGCAGCAAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: VAFARTTLMFLVTASFTYQCSMC*CSSKVQ
Trigger: TTGCACTTTGCTGCTGCATCAACACATGGAGCATTG...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGCTTTACTCTTCATATTaGCATCGGCCCCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQLYSSY*HRPHCQ
Trigger: TTGGCAATGGGGCCGATGTCAATATGAAGAGTAAAG...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGGTGACCATAAGCAGCTaGATAATGAACTGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVVTISS*IMNCVV
Trigger: TACAACGCAGTTCATTATTCAGCTGCTTATGGTCAC...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGAAGATTGAGGCTCCCTaGTTAATGAGTACATCCACA +
Preference number: 4 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGKIEAP*LMSTST
Trigger: TGTGGATGTACTCATTAATCAGGGAGCCTCAATCTT...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTTGTTGCTGCTGCATaGATAGGTGTCCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVFVAAA*IGVLFK
Trigger: TTTGAAGAGGACACCTATTCATGCAGCAGCAACAAA...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATCTTGAGCATTATGGCTaGGCAGCAGCTGTAAACACT +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNLEHYG*AAAVNT
Trigger: AGTGTTTACAGCTGCTGCTCAGCCATAATGCTCAAG...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGAAGGCACTAGTTTCATaGCCCTTGCTACAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQKALVS*PLLQAK
Trigger: TTTGGCTTGTAGCAAGGGTCATGAAACTAGTGCCTT...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGAATGTGACCCATATATaGTGCCCAATGGATAGCACG +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQNVTHI*CPMDST
Trigger: CGTGCTATCCATTGGGCAGCATATATGGGTCACATT...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp ACAAGTATTTTCACCCGTATTGCACCCAGTCAGCTGGTTTTTAATTCTAATAGTGTCACTTCAGCTCCATaGGACACAAGCAATTTCACT +
Preference number: 4 (lower is better)
Translates to: TSIFTRIAPSQLVFNSNSVTSAP*DTSNFT
Trigger: AGTGAAATTGCTTGTGTCGCATGGAGCTGAAGTGAC...ACTATTAGAATTAAAAACCAGCTGACTGGGTGCAATACGGGTGAAAATACTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp ACAAGTATTTTCACCCGTATTGCACCCAGTCAGCTGGTTTTTAATTCTAATAGTTACCGTGCTGCTATGTaGAAAGGGGTATTTCCATTC +
Preference number: 4 (lower is better)
Translates to: TSIFTRIAPSQLVFNSNSYRAAM*KGVFPF
Trigger: GAATGGAAATACCCCTTTGCACATAGCAGCACGGTA...ACTATTAGAATTAAAAACCAGCTGACTGGGTGCAATACGGGTGAAAATACTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATATGTATGCCACGCTTTaGAGTGTCAGCACCACTTGT +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNMYATL*SVSTTC
Trigger: ACAAGTGGTGCTGACACTGCAAAGCGTGGCATACAT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTCTTTTTATTAAAGTCTaGACCAGTATTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GKITLVEGTPAFVKRLETLFIKV*TSIQQK
Trigger: CTTCTGCTGAATACTGGTGCAGACTTTAATAAAAAG...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATACTGCGTTGTATCCTTaGTTATCACGGATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNTALYP*LSRIPG
Trigger: TCCAGGGATCCGTGATAAGCAAGGATACAACGCAGT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGACCATTTGTTGCTGCTaGATGAATAGGTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVTICCC*MNRCPL
Trigger: AAGAGGACACCTATTCATGCAGCAGCAACAAATGGT...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCCTGTGGCGTTCACAATaGTGGCACCTAATGTATCAA +
Preference number: 4 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFLWRSQ*WHLMYQ
Trigger: TTGATACATTAGGTGCCAGCATTGTGAACGCCACAG...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCCCACTGTCATTAAAATaGATATTCACCTTCCTACTA +
Preference number: 4 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTPLSLK*IFTFLL
Trigger: TAGTAGGAAGGTGAATATGCATTTTAATGACAGTGG...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGATTACAGCTCCACTCTaGATAATGGTTTGTGATCGG +
Preference number: 4 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVITAPL*IMVCDR
Trigger: CCGATCACAAACCATTATCCAGAGTGGAGCTGTAAT...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATAGCAGCGTAGTGCAGTaGAGATCTCCCAAATTTGTC +
Preference number: 4 (lower is better)
Translates to: VAFARTTLMFLVTASFTYSSVVQ*RSPKFV
Trigger: GACAAATTTGGGAGATCTCCACTGCACTACGCTGCT...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACTTTCCTTCCGTTTTCTaGAAAACTTCCTGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADFPSVF*KTSCSK
Trigger: TTTAGAACAGGAAGTTTTCCAGAAAACGGAAGGAAA...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACGGTTTAATACAGCATTaGAAGGCTTTCAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: VQIPFETVLWGFPSLGADGLIQH*KAFRCF
Trigger: AAAACATCTGAAAGCCTTCCAATGCTGTATTAAACC...GTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTATCTGCTTTCTCTCATaGTTTAATACAGCATTGGAA +
Preference number: 4 (lower is better)
Translates to: GKITLVEGTPAFVKRLETICFLS*FNTALE
Trigger: TTCCAATGCTGTATTAAACCATGAGAGAAAGCAGAT...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR TCA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATTCACTACTTCAATGTaGCCCATATATGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYIFTTSM*PIYAAQ
Trigger: TTGGGCAGCATATATGGGTCACATTGAAGTAGTGAA...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGATCCTTTGTTCAGCAATaGGTAAACACAGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRSFVQQ*VNTVCV
Trigger: CACACAGACTGTGTTTACTCATTGCTGAACAAAGGA...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATAAGGCACTAGTTTCATaGCCCTTGCTACAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: VAFARTTLMFLVTASFTYKALVS*PLLQAK
Trigger: TTTGGCTTGTAGCAAGGGTCATGAAACTAGTGCCTT...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATTTTCCCAAAAGTTCCTaGACCACCATTGTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: VAFARTTLMFLVTASFTYFPKSS*TTIVSP
Trigger: TGGGCTAACAATGGTGGTTCAGGAACTTTTGGGAAA...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTGTTTGTCCATTTTCTaGAGCCATCATAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVCLSIF*SHHKRC
Trigger: ACACCTCTTATGATGGCTGCAGAAAATGGACAAACA...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATCAAGGCTGCGTTGGTTaGATTGATGAGGTTTCTATC +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNQGCVG*IDEVSI
Trigger: GATAGAAACCTCATCAATGCAACCAACGCAGCCTTG...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp ACAAGTATTTTCACCCGTATTGCACCCAGTCAGCTGGTTTTTAATTCTAATAGTGCCATTTTCATCTACTaGAAGCACACTTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TSIFTRIAPSQLVFNSNSAIFIY*KHTCSF
Trigger: AAAGGAGCAAGTGTGCTTGCAGTAGATGAAAATGGC...ACTATTAGAATTAAAAACCAGCTGACTGGGTGCAATACGGGTGAAAATACTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATGTAAGCAGGTTAGAGTaGACAGTGTCCCCAATTGTT +
Preference number: 4 (lower is better)
Translates to: VAFARTTLMFLVTASFTYVSRLE*TVSPIV
Trigger: AACAATTGGGGACACTGTGCACTCTAACCTGCTTAC...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGGGTCCTTTTGCAATTTaGTGTGCACATAATGCCTAC +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQGPFAI*CAHNAY
Trigger: GTAGGCATTATGTGCACAGCAAATTGCAAAAGGACC...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATATATGCTGCCCAATaGATAGCACGCCTATCTTTC +
Preference number: 4 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFIYAAQ*IARLSF
Trigger: GAAAGATAGGCGTGCTATCCATTGGGCAGCATATAT...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR CAA 72 bp ACTGCTCTGTGTAAAGGTGTCAACCATTTGCTGTCTTaGGCATTAACTCTAGCTCCAGATAAAATAAGAAGT +
Preference number: 4 (lower is better)
Translates to: TALCKGVNHLLS*ALTLAPDKIRS
Trigger: ACTTCTTATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS-3UTR TCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATTTCACTACTTCAATGTaGCCCATATATGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNFTTSM*PIYAAQ
Trigger: TTGGGCAGCATATATGGGTCACATTGAAGTAGTGAA...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATTCCTTTGTTCAGCAATaGGTAAACACAGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNSFVQQ*VNTVCV
Trigger: CACACAGACTGTGTTTACTCATTGCTGAACAAAGGA...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGACACTTAGCACCATGTTaGAGTAATGCATCTACACAT +
Preference number: 4 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRHLAPC*SNASTH
Trigger: ATGTGTAGATGCATTACTTCAACATGGTGCTAAGTG...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATAAAAGCTGACTGTTTTTaGGGTGTTGGTATAACGGTT +
Preference number: 4 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYIKADCF*GVGITV
Trigger: AACCGTTATACCAACACCTCAAAAACAGTCAGCTTT...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGTTCCACAAAGAATTCTaGCATCAATGTGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGFHKEF*HQCVFL
Trigger: GAGGAAAACACATTGATGTCAGAATTCTTTGTGGAA...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR TCA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGGACCCTCAATGTATATaGAATCATTTTCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGDPQCI*NHFHWE
Trigger: TTCCCAGTGAAAATGATTTCATATACATTGAGGGTC...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCGATGCAGCAGCAAAGTaGAAAGGAGTAAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFDAAAK*KGVNPF
Trigger: AAAAGGATTTACTCCTTTGCACTTTGCTGCTGCATC...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGATGTTTGTCCATTTTCTaGAGCCATCATAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRCLSIF*SHHKRC
Trigger: ACACCTCTTATGATGGCTGCAGAAAATGGACAAACA...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCTGTTTGTCCATTTTCTaGAGCCATCATAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFCLSIF*SHHKRC
Trigger: ACACCTCTTATGATGGCTGCAGAAAATGGACAAACA...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATTACTGCAAGCACACTTaGTCCTTTTCCCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: VAFARTTLMFLVTASFTYYCKHT*SFSQKF
Trigger: GAACTTTTGGGAAAAGGAGCAAGTGTGCTTGCAGTA...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCAATTTGGCAGGCAACTaGTTCTCTCTCCAAATAGTA +
Preference number: 4 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFNLAGN*FSLQIV
Trigger: TACTATTTGGAGAGAGAAGCAGTTGCCTGCCAAATT...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCTTCCCCACTTATCTTTaGCATCTACATTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFFPTYL*HLHLLL
Trigger: AAGGAGCAAATGTAGATGCCAAAGATAAGTGGGGAA...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCTGGCGTTCACAATGCTaGCACCTAATGTATCAATTA +
Preference number: 4 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFWRSQC*HLMYQL
Trigger: TAATTGATACATTAGGTGCCAGCATTGTGAACGCCA...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATTGGAAGTGTTCAAGGTaGAAAGATCACCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VAFARTTLMFLVTASFTYWKCSR*KDHPCR
Trigger: TCTACAAGGGTGATCTTTCCACCTTGAACACTTCCA...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATAAAGCTGACTGTTTTTaGGGTGTTGGTATAACGGTT +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNKADCF*GVGITV
Trigger: AACCGTTATACCAACACCTCAAAAACAGTCAGCTTT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR TCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATCACTTAGAGATCTCCTaGACTAAATGGCATTGTTTG +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNHLEIS*TKWHCL
Trigger: CAAACAATGCCATTTAGTTCAGGAGATCTCTAAGTG...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGAAAGACTTTTTATCCTTaGATGTCACTTCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRKTFYP*MSLQLH
Trigger: ATGGAGCTGAAGTGACATGCAAGGATAAAAAGTCTT...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGATCTTGAATATCCACTaGATTCTGTGGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQILNIH*ILWFCI
Trigger: AATGCAGAACCACAGAATGCAGTGGATATTCAAGAT...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCTGCCCAATACAGAAATaGCTTTCAAGAGACTTTAGT +
Preference number: 4 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFCPIQK*LSRDFS
Trigger: ACTAAAGTCTCTTGAAAGGCATTTCTGTATTGGGCA...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATTTCCCCACTTATCTTTaGCATCTACATTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNFPTYL*HLHLLL
Trigger: AAGGAGCAAATGTAGATGCCAAAGATAAGTGGGGAA...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGGCAGACTCTCACAGATaGATTACAAAAGTAATGAAA +
Preference number: 4 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVADSHR*ITKVMK
Trigger: TTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGC...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATATATGTAAAGGGGTTTaGCAATTTTTGTCTCGAGCA +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNICKGV*QFLSRA
Trigger: TGCTCGAGACAAAAATTGGCAAACCCCTTTACATAT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATAAGACTTTTTATCCTTaGATGTCACTTCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNKTFYP*MSLQLH
Trigger: ATGGAGCTGAAGTGACATGCAAGGATAAAAAGTCTT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR GCA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATTGCCCAATACAGAAATaGCTTTCAAGAGACTTTAGT +
Preference number: 4 (lower is better)
Translates to: VAFARTTLMFLVTASFTYCPIQK*LSRDFS
Trigger: ACTAAAGTCTCTTGAAAGGCATTTCTGTATTGGGCA...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR GCA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATTTAAAGGAGGTCATTTaGTATTACCACCATTTCACC +
Preference number: 4 (lower is better)
Translates to: VAFARTTLMFLVTASFTYLKEVI*YYHHFT
Trigger: GGTGAAATGGTGGTAATAGCAAATGACCTCCTTTAA...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
3UTR CAA 72 bp ATCTCAATGTCTATGTCACAAGTATTTTCACCCGTATaGCACCCAGTCAGCTGGTTTTTAATTCTAATAGTA +
Preference number: 4 (lower is better)
Translates to: ISMSMSQVFSPV*HPVSWFLILIV
Trigger: TACTATTAGAATTAAAAACCAGCTGACTGGGTGCAATACGGGTGAAAATACTTGTGACATAGACATTGAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CCA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATATTTCCATAGGCATTTaGTTCATTCATATCAACTCC +
Preference number: 4 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNISIGI*FIHINS
Trigger: GGAGTTGATATGAATGAACCAAATGCCTATGGAAAT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CCA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATTTTCCTTCCGTTTTCTaGAAAACTTCCTGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: VAFARTTLMFLVTASFTYFPSVF*KTSCSK
Trigger: TTTAGAACAGGAAGTTTTCCAGAAAACGGAAGGAAA...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS GCA 90 bp CGCCGCCGACCGGCCCACTGCTCCCGCCCCAGTAGCCTTGGCCGCTaGCCGGGACCAGCGGGTCCGCGGCCGACTGCGCTGAGAAGACCT +
Preference number: 5 (lower is better)
Translates to: RRRPAHCSRPSSLGR*PGPAGPRPTALRRP
Trigger: AGGTCTTCTCAGCGCAGTCGGCCGCGGACCCGCTGGTCCCGGGCAGCGGCCAAGGCTACTGGGGCGGGAGCAGTGGGCCGGTCGGCGGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399451.6
CDS-3UTR CAA 90 bp CTGCTTGGTGAGGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTCCCGCCCCAGTAGCCTaGGCCGCTGCCCGGGACCAG +
Preference number: 5 (lower is better)
Translates to: LLGEVESLGSVQGGKITLPAPVA*AAARDQ
Trigger: CTGGTCCCGGGCAGCGGCCAAGGCTACTGGGGCGGG...AAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACCTCACCAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399451.6
CDS-3UTR CAA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAATTCTCAGGGTTCTCTaGGAGGACAGACCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGILRVL*EDRPRP
Trigger: GGGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAAT...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCTCAGCCACATCCTTATaGGGAGCACAGGCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFSATSL*GAQAKA
Trigger: AGCTTTGGCCTGTGCTCCCAATAAGGATGTGGCTGA...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGATTCTCAGGGTTCTCTaGGAGGACAGACCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRILRVL*EDRPRP
Trigger: GGGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAAT...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCTGGGGTTTCCCTTCATaGGGTGCAGACCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFWGFPS*GADQRK
Trigger: CTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCA...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCGGCTGGTCACGGAGTTaGAGGAACGCCATGGCGGTC +
Preference number: 5 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCGWSRS*RNAMAV
Trigger: GACCGCCATGGCGTTCCTCAAACTCCGTGACCAGCC...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000412318.5
CDS-3UTR CAA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCCAAGGTCATTCACACTaGCTCCTGATCCCACAAGAG +
Preference number: 5 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFQGHSH*LLIPQE
Trigger: CTCTTGTGGGATCAGGAGCAAGTGTGAATGACCTTG...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGTCAGAATCGGAGTCGTaGAGCTCATCCACGTCAGTG +
Preference number: 5 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRSESES*SSSTSV
Trigger: CACTGACGTGGATGAGCTCAACGACTCCGATTCTGA...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGCATGTATGCCACGCTTaGCAGTGTCAGCACCACTTG +
Preference number: 5 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRHVCHA*QCQHHL
Trigger: CAAGTGGTGCTGACACTGCAAAGCGTGGCATACATG...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAAACTGCGTTGTATCCTaGCTTATCACGGATCCCTGG +
Preference number: 5 (lower is better)
Translates to: SWRTDPGPKTEVTGREASNCVVS*LITDPW
Trigger: CCAGGGATCCGTGATAAGCAAGGATACAACGCAGTT...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCACAGTCTGTGTGCCCGTaGAGAACAGATAGCATCAGA +
Preference number: 5 (lower is better)
Translates to: SWRTDPGPKTEVTGREASQSVCP*RTDSIR
Trigger: TCTGATGCTATCTGTTCTCAACGGGCACACAGACTG...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCGTCCACAGAATTGACTaGAGCATTATGGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFVHRID*SIMAEQ
Trigger: CTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGAC...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGTGGGGTTTCCCTTCATaGGGTGCAGACCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRWGFPS*GADQRK
Trigger: CTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCA...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS TCA 90 bp CTCCCTCCTCCTCAGCCTCTCAGTAGGTCTCAGAATCGGAGTCGTTaGGCTCATCCACGTCAGTGTATAAGTACTCCTGTTCCCCTCCAA +
Preference number: 5 (lower is better)
Translates to: LPPPQPLSRSQNRSR*AHPRQCISTPVPLQ
Trigger: TTGGAGGGGAACAGGAGTACTTATACACTGACGTGGATGAGCTCAACGACTCCGATTCTGAGACCTACTGAGAGGCTGAGGAGGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000498713.1
ENST00000624145.3
ENST00000683139.1
CDS GCA 90 bp CCTAATAACAAAGATGGGGGCAGGGAGAGCAGAACCTCTGTGCAGTaGACTGTCACACCTTGTCAACGTGTAGCTCGGCATCAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: PNNKDGGRESRTSVQ*TVTPCQRVARHQAQ
Trigger: CTGAGCTTGATGCCGAGCTACACGTTGACAAGGTGTGACAGTGCACTGCACAGAGGTTCTGCTCTCCCTGCCCCCATCTTTGTTATTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498713.1
CDS-3UTR CAA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGCAACACTTCCAGTGCTaGATGGTGACCATGATAGGC +
Preference number: 5 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRQHFQC*MVTMIG
Trigger: GCCTATCATGGTCACCATCAAGCACTGGAAGTGTTG...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS TCA 90 bp CAGGGGTGTGCAGCCTCTTTCATCAAGGTCATTCACACTTGCTCCTaGTCCCACAAGAGCAAACAGGCACTGGTAATTGCAGTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: QGCAASFIKVIHTCS*SHKSKQALVIAVGS
Trigger: GCTGCCAACTGCAATTACCAGTGCCTGTTTGCTCTTGTGGGATCAGGAGCAAGTGTGAATGACCTTGATGAAAGAGGCTGCACACCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS TCA 90 bp GGCGTCCGGCCCCTGCTATCCCGAAGTAAGCACTTAGCACCATGTTaGAGTAATGCATCTACACATTCTTCATGGCCTGTAACTGCCCCT +
Preference number: 5 (lower is better)
Translates to: GVRPLLSRSKHLAPC*SNASTHSSWPVTAP
Trigger: AGGGGCAGTTACAGGCCATGAAGAATGTGTAGATGCATTACTTCAACATGGTGCTAAGTGCTTACTTCGGGATAGCAGGGGCCGGACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000463533.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS GCA 90 bp AAGGCAGAGCGTTCATTCTTTCTCCATCAGGCAGTTGTCTGTGGCTaGTCCAGCAAAAGGGCACAGGCACCAGGCAGAAATGGTGTTAGT +
Preference number: 5 (lower is better)
Translates to: KAERSFFLHQAVVCG*SSKRAQAPGRNGVS
Trigger: ACTAACACCATTTCTGCCTGGTGCCTGTGCCCTTTTGCTGGAGCAGCCACAGACAACTGCCTGATGGAGAAAGAATGAACGCTCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461696.1
ENST00000683139.1
CDS-3UTR CAA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGATCTTTACTCTTCATATaGACATCGGCCCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGSLLFI*TSAPLP
Trigger: TGGCAATGGGGCCGATGTCAATATGAAGAGTAAAGA...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGCAAGGTCATTCACACTaGCTCCTGATCCCACAAGAG +
Preference number: 5 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGQGHSH*LLIPQE
Trigger: CTCTTGTGGGATCAGGAGCAAGTGTGAATGACCTTG...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCCTGTCCATTTCCATCTaGAATATCCACTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFLSISI*NIHCIL
Trigger: CAGAATGCAGTGGATATTCAAGATGGAAATGGACAG...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGTCAGCAGCACCTTCGTaGTCATTTATCACGGCACAA +
Preference number: 5 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRSAAPS*SFITAQ
Trigger: TTGTGCCGTGATAAATGACAACGAAGGTGCTGCTGA...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCATGATAAAGGACTACTaGATGAGACAGGCATCATGG +
Preference number: 5 (lower is better)
Translates to: LLEDRPRPKDRSYREGGFMIKDY*MRQASW
Trigger: CCATGATGCCTGTCTCATCAAGTAGTCCTTTATCAT...GAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS TCA 90 bp TCCATGATTGTCTGCTGTGGCTGGATTTGCATCCATAGATGCTGCTaGCTGCAAAAGGGCTCCAAGAACACCAATGTGTCCACAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SMIVCCGWICIHRCC*LQKGSKNTNVSTGS
Trigger: GCTGCCTGTGGACACATTGGTGTTCTTGGAGCCCTTTTGCAGTCAGCAGCATCTATGGATGCAAATCCAGCCACAGCAGACAATCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000463533.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS-3UTR CAA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGAACCATTTGCTGTCTTaGGCATTAACTCTAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRNHLLS*ALTLAP
Trigger: TGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTT...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAAGATCTAGAAGGTACTaGACTACGCTGATCATTCCA +
Preference number: 5 (lower is better)
Translates to: SWRTDPGPKTEVTGREASRSRRY*TTLIIP
Trigger: TGGAATGATCAGCGTAGTCAAGTACCTTCTAGATCT...TGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGCTTTGGCATCTACATTaGCTCCTTTGTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRLWHLH*LLCSAM
Trigger: CATTGCTGAACAAAGGAGCAAATGTAGATGCCAAAG...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGCTTCCCCACTTATCTTaGGCATCTACATTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRLPHLS*ASTFAP
Trigger: AGGAGCAAATGTAGATGCCAAAGATAAGTGGGGAAG...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGGAGGAGTTCTTCCTTTaGAATCTGTGGCGTTCACAA +
Preference number: 5 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLREEFFL*NLWRSQ
Trigger: TTGTGAACGCCACAGATTCAAAAGGAAGAACTCCTC...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGGTTTGCAAGGCTGCGTaGGTTGCATTGATGAGGTTT +
Preference number: 5 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGVCKAA*VALMRF
Trigger: AAACCTCATCAATGCAACCAACGCAGCCTTGCAAAC...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCGCACAGTGTCCCCAATaGTTCCTGGCACTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCAQCPQ*FLALQN
Trigger: GTTTTGCAGTGCCAGGAACAATTGGGGACACTGTGC...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS GCA 90 bp TCACACTTGCTCCTGATCCCACAAGAGCAAACAGGCACTGGTAATTaGAGTTGGCAGCAGCGTAGTGCAGTGGAGATCTCCCAAATTTGT +
Preference number: 5 (lower is better)
Translates to: SHLLLIPQEQTGTGN*SWQQRSAVEISQIC
Trigger: ACAAATTTGGGAGATCTCCACTGCACTACGCTGCTGCCAACTGCAATTACCAGTGCCTGTTTGCTCTTGTGGGATCAGGAGCAAGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS-3UTR CAA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCCTTGTAATAAGAGTGTaGATCAGCAGCTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQALVIRV*ISSSWP
Trigger: TGGCCATGAGCTGCTGATCAACACTCTTATTACAAG...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCATGTATGCCACGCTTaGCAGTGTCAGCACCACTTG +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLHVCHA*QCQHHL
Trigger: CAAGTGGTGCTGACACTGCAAAGCGTGGCATACATG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGCTTTGGCATCTACATTaGCTCCTTTGTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRLWHLH*LLCSAM
Trigger: CATTGCTGAACAAAGGAGCAAATGTAGATGCCAAAG...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTAACATGCAGAGGTGTTaGCAAGGCTGCGTTGGTTGC +
Preference number: 5 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGNMQRC*QGCVGC
Trigger: GCAACCAACGCAGCCTTGCAAACACCTCTGCATGTT...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGTTAAAGGAGGTCATTaGCTATTACCACCATTTCAC +
Preference number: 5 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRVKGGH*LLPPFH
Trigger: GTGAAATGGTGGTAATAGCAAATGACCTCCTTTAAC...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGATCAAAAGCATTAATATaGGCACCTCTAGACAAGAGT +
Preference number: 5 (lower is better)
Translates to: RVLLEDRPRPKDRSYREGSKALI*APLDKS
Trigger: ACTCTTGTCTAGAGGTGCCAATATTAATGCTTTTGA...TCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCAAGGTCATTCACACTaGCTCCTGATCCCACAAGAG +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLQGHSH*LLIPQE
Trigger: CTCTTGTGGGATCAGGAGCAAGTGTGAATGACCTTG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCCACGGATCCCTGGATTaGCATCGTTTCTTAATAAGT +
Preference number: 5 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQAHGSLD*HRFLIS
Trigger: ACTTATTAAGAAACGATGCAAATCCAGGGATCCGTG...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGAACTGCGTTGTATCCTaGCTTATCACGGATCCCTGG +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLNCVVS*LITDPW
Trigger: CCAGGGATCCGTGATAAGCAAGGATACAACGCAGTT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCCTAGAGGAGTTTCACTaGCAATCAGCTGAAGACATA +
Preference number: 5 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQALEEFH*QSAEDI
Trigger: TATGTCTTCAGCTGATTGCAAGTGAAACTCCTCTAG...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACCAACACTTCCAGTGCTaGATGGTGACCATGATAGGC +
Preference number: 5 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDQHFQC*MVTMIG
Trigger: GCCTATCATGGTCACCATCAAGCACTGGAAGTGTTG...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCAACACTTCCAGTGCTaGATGGTGACCATGATAGGC +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLQHFQC*MVTMIG
Trigger: GCCTATCATGGTCACCATCAAGCACTGGAAGTGTTG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACCAGTCTGTGTGCCCGTaGAGAACAGATAGCATCAGA +
Preference number: 5 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDQSVCP*RTDSIR
Trigger: TCTGATGCTATCTGTTCTCAACGGGCACACAGACTG...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCAGTCTGTGTGCCCGTaGAGAACAGATAGCATCAGA +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLQSVCP*RTDSIR
Trigger: TCTGATGCTATCTGTTCTCAACGGGCACACAGACTG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGATCAGCCACATCCTTATaGGGAGCACAGGCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGSATSL*GAQAKA
Trigger: AGCTTTGGCCTGTGCTCCCAATAAGGATGTGGCTGA...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAGCACAGTGTCCCCAATaGTTCCTGGCACTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRAQCPQ*FLALQN
Trigger: GTTTTGCAGTGCCAGGAACAATTGGGGACACTGTGC...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp TCAGGGTTCTCTTGGAGGACAGACCCAGGCCCAAAGACAGAAGTTACCGGGAGGAGTTATTTGGTCCTTTaGCAATTTGCTGTGCACATA +
Preference number: 5 (lower is better)
Translates to: SGFSWRTDPGPKTEVTGRSYLVL*QFAVHI
Trigger: TATGTGCACAGCAAATTGCAAAAGGACCAAATAACT...CCTCCCGGTAACTTCTGTCTTTGGGCCTGGGTCTGTCCTCCAAGAGAACCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp ACAGCTTTATTAGCAGCAGCTATATGTAAAGGGGTTTGCCAATTTTTGTCTCGAGCCTGGTCACGGAGTTaGAGGAACGCCATGGCGGTC +
Preference number: 5 (lower is better)
Translates to: TALLAAAICKGVCQFLSRAWSRS*RNAMAV
Trigger: GACCGCCATGGCGTTCCTCAAACTCCGTGACCAGGC...TCGAGACAAAAATTGGCAAACCCCTTTACATATAGCTGCTGCTAATAAAGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS-3UTR CAA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTTGACATCGGCCCCATaGCCAACTAGAAGCTCTAAA +
Preference number: 5 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDLTSAP*PTRSSK
Trigger: TTTAGAGCTTCTAGTTGGCAATGGGGCCGATGTCAA...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTTGACATCGGCCCCATaGCCAACTAGAAGCTCTAAA +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLTSAP*PTRSSK
Trigger: TTTAGAGCTTCTAGTTGGCAATGGGGCCGATGTCAA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTCATGTATGCCACGCTTaGCAGTGTCAGCACCACTTG +
Preference number: 5 (lower is better)
Translates to: GKITLVEGTPAFVKRLETHVCHA*QCQHHL
Trigger: CAAGTGGTGCTGACACTGCAAAGCGTGGCATACATG...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTCATGTATGCCACGCTTaGCAGTGTCAGCACCACTTG +
Preference number: 5 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSIHVCHA*QCQHHL
Trigger: CAAGTGGTGCTGACACTGCAAAGCGTGGCATACATG...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAAACTGCGTTGTATCCTaGCTTATCACGGATCCCTGG +
Preference number: 5 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRNCVVS*LITDPW
Trigger: CCAGGGATCCGTGATAAGCAAGGATACAACGCAGTT...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGGTCCACAGAATTGACTaGAGCATTATGGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLVHRID*SIMAEQ
Trigger: CTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGAC...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCGCTGCGTTGGTTGCATaGATGAGGTTTCTATCTGTT +
Preference number: 5 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCAALVA*MRFLSV
Trigger: AACAGATAGAAACCTCATCAATGCAACCAACGCAGC...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCTCAGAATCGGAGTCGTaGAGCTCATCCACGTCAGTG +
Preference number: 5 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTSESES*SSSTSV
Trigger: CACTGACGTGGATGAGCTCAACGACTCCGATTCTGA...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACGTATTTTCACCCGTATaGCACCCAGTCAGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDVFSPV*HPVSWF
Trigger: AAACCAGCTGACTGGGTGCAATACGGGTGAAAATAC...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp ACCCAGGCCCAAAGACAGAAGTTACCGGGAGGGAGGCTTCAACTCCATCTAAGGCTTTATAGCTACACCTaGGATTTCATTAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: TQAQRQKLPGGRLQLHLRLYSYT*DFIRCG
Trigger: ACCACATCTAATGAAATCCAAGGTGTAGCTATAAAG...CCTTAGATGGAGTTGAAGCCTCCCTCCCGGTAACTTCTGTCTTTGGGCCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGACCCAGGCCGTTAAAGGAGGTCATTaGCTATTACCACCATTTCAC +
Preference number: 5 (lower is better)
Translates to: RDSSFQHSQGSLGGQTQAVKGGH*LLPPFH
Trigger: GTGAAATGGTGGTAATAGCAAATGACCTCCTTTAAC...GGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS CCA 90 bp GCAGTGTCAGCACCACTTGTAATAAGAGTGTTGATCAGCAGCTCATaGCCATACCGTGCTGCTATGTGCAAAGGGGTATTTCCATTCTTA +
Preference number: 5 (lower is better)
Translates to: AVSAPLVIRVLISSS*PYRAAMCKGVFPFL
Trigger: TAAGAATGGAAATACCCCTTTGCACATAGCAGCACGGTATGGCCATGAGCTGCTGATCAACACTCTTATTACAAGTGGTGCTGACACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000492895.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS-3UTR CAA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATGGCTGGTCACGGAGTTaGAGGAACGCCATGGCGGTC +
Preference number: 5 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNGWSRS*RNAMAV
Trigger: GACCGCCATGGCGTTCCTCAAACTCCGTGACCAGCC...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000412318.5
CDS-3UTR CAA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTCTAGACAAGAGTAGTTaGACCATCTCACCATGTCCA +
Preference number: 5 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGLDKSS*TISPCP
Trigger: TGGACATGGTGAGATGGTCAAACTACTCTTGTCTAG...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTAGACAAGAGTAGTTaGACCATCTCACCATGTCCA +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLDKSS*TISPCP
Trigger: TGGACATGGTGAGATGGTCAAACTACTCTTGTCTAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCAGATCTAGAAGGTACTaGACTACGCTGATCATTCCA +
Preference number: 5 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCRSRRY*TTLIIP
Trigger: TGGAATGATCAGCGTAGTCAAGTACCTTCTAGATCT...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTTTGACATCGGCCCCATaGCCAACTAGAAGCTCTAAA +
Preference number: 5 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSLTSAP*PTRSSK
Trigger: TTTAGAGCTTCTAGTTGGCAATGGGGCCGATGTCAA...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTCTTTACTCTTCATATaGACATCGGCCCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLSLLFI*TSAPLP
Trigger: TGGCAATGGGGCCGATGTCAATATGAAGAGTAAAGA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTTGTAATAAGAGTGTaGATCAGCAGCTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLVIRV*ISSSWP
Trigger: TGGCCATGAGCTGCTGATCAACACTCTTATTACAAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTCAAGGTCATTCACACTaGCTCCTGATCCCACAAGAG +
Preference number: 5 (lower is better)
Translates to: GKITLVEGTPAFVKRLETQGHSH*LLIPQE
Trigger: CTCTTGTGGGATCAGGAGCAAGTGTGAATGACCTTG...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGAAGTATTCCAGGCACTaGCCATCTGTGTCTGATGTA +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLKYSRH*PSVSDV
Trigger: TACATCAGACACAGATGGCAAGTGCCTGGAATACTT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCCACGGATCCCTGGATTaGCATCGTTTCTTAATAAGT +
Preference number: 5 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCHGSLD*HRFLIS
Trigger: ACTTATTAAGAAACGATGCAAATCCAGGGATCCGTG...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGGTAAAGGGCTTATTGTaGCTCTATTATCTGAATCAC +
Preference number: 5 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGVKGLL*LYYLNH
Trigger: GTGATTCAGATAATAGAGCAACAATAAGCCCTTTAC...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTTCCCCACTTATCTTaGGCATCTACATTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLPHLS*ASTFAP
Trigger: AGGAGCAAATGTAGATGCCAAAGATAAGTGGGGAAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAGTTTGCAAGGCTGCGTaGGTTGCATTGATGAGGTTT +
Preference number: 5 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGVCKAA*VALMRF
Trigger: AAACCTCATCAATGCAACCAACGCAGCCTTGCAAAC...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTAAGGTAGTCTTCAATTaGGCAGGCAACTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LRQYFGVSLHWVQTKGSGKVVFN*AGNCFS
Trigger: AGAGAAGCAGTTGCCTGCCAAATTGAAGACTACCTT...ACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp CTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAAGTGGTTAAGCTGGGGGCTTTATAGCTACACCTaGGATTTCATTAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: LWGFPSLGADQRKWLSWGLYSYT*DFIRCG
Trigger: ACCACATCTAATGAAATCCAAGGTGTAGCTATAAAG...CCCCCAGCTTAACCACTTCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS TCA 90 bp TTGCTCCTTTGTTCAGCAATGAGTAAACACAGTCTGTGTGCCCGTTaGGAACAGATAGCATCAGAGGCGTCTGTCCATTTCCATCTTGAA +
Preference number: 5 (lower is better)
Translates to: LLLCSAMSKHSLCAR*EQIASEASVHFHLE
Trigger: TTCAAGATGGAAATGGACAGACGCCTCTGATGCTATCTGTTCTCAACGGGCACACAGACTGTGTTTACTCATTGCTGAACAAAGGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000463533.1
ENST00000497037.5
ENST00000624145.3
ENST00000683139.1
CDS GCA 90 bp ATAAGAGTGTTGATCAGCAGCTCATGGCCATACCGTGCTGCTATGTaGAAAGGGGTATTTCCATTCTTATCCTCACAGTCGATTACAGCT +
Preference number: 5 (lower is better)
Translates to: IRVLISSSWPYRAAM*KGVFPFLSSQSITA
Trigger: AGCTGTAATCGACTGTGAGGATAAGAATGGAAATACCCCTTTGCACATAGCAGCACGGTATGGCCATGAGCTGCTGATCAACACTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000492895.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS GCA 90 bp ACCACTTGTAATAAGAGTGTTGATCAGCAGCTCATGGCCATACCGTaGTGCTATGTGCAAAGGGGTATTTCCATTCTTATCCTCACAGTC +
Preference number: 5 (lower is better)
Translates to: TTCNKSVDQQLMAIP*CYVQRGISILILTV
Trigger: GACTGTGAGGATAAGAATGGAAATACCCCTTTGCACATAGCAGCACGGTATGGCCATGAGCTGCTGATCAACACTCTTATTACAAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000492895.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS GCA 90 bp CTGCATGGAGAGGAGTTCTTCCTTTTGAATCTGTGGCGTTCACAATaGTGGCACCTAATGTATCAATTAACATCTCAGCAGCACCTTCGT +
Preference number: 5 (lower is better)
Translates to: LHGEEFFLLNLWRSQ*WHLMYQLTSQQHLR
Trigger: ACGAAGGTGCTGCTGAGATGTTAATTGATACATTAGGTGCCAGCATTGTGAACGCCACAGATTCAAAAGGAAGAACTCCTCTCCATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000624145.3
ENST00000683139.1
CDS-3UTR CAA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCTAGACAAGAGTAGTTaGACCATCTCACCATGTCCA +
Preference number: 5 (lower is better)
Translates to: VESLGSVQGGKITLVEGTLDKSS*TISPCP
Trigger: TGGACATGGTGAGATGGTCAAACTACTCTTGTCTAG...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGAGATCTAGAAGGTACTaGACTACGCTGATCATTCCA +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLRSRRY*TTLIIP
Trigger: TGGAATGATCAGCGTAGTCAAGTACCTTCTAGATCT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp GGAAAGATCACCCTTGTAGAAGGGACTCCTGCATTTGTTAAGAGGTTAGAGACTTTGACATCGGCCCCATaGCCAACTAGAAGCTCTAAA +
Preference number: 5 (lower is better)
Translates to: GKITLVEGTPAFVKRLETLTSAP*PTRSSK
Trigger: TTTAGAGCTTCTAGTTGGCAATGGGGCCGATGTCAA...AGTCTCTAACCTCTTAACAAATGCAGGAGTCCCTTCTACAAGGGTGATCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGTAATAAGAGTGTaGATCAGCAGCTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSLVIRV*ISSSWP
Trigger: TGGCCATGAGCTGCTGATCAACACTCTTATTACAAG...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTAAGTATTCCAGGCACTaGCCATCTGTGTCTGATGTA +
Preference number: 5 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSKYSRH*PSVSDV
Trigger: TACATCAGACACAGATGGCAAGTGCCTGGAATACTT...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCACGGATCCCTGGATTaGCATCGTTTCTTAATAAGT +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLHGSLD*HRFLIS
Trigger: ACTTATTAAGAAACGATGCAAATCCAGGGATCCGTG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTAGAGGAGTTTCACTaGCAATCAGCTGAAGACATA +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLEEFH*QSAEDI
Trigger: TATGTCTTCAGCTGATTGCAAGTGAAACTCCTCTAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTGTCCATTTCCATCTaGAATATCCACTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLSISI*NIHCIL
Trigger: CAGAATGCAGTGGATATTCAAGATGGAAATGGACAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGCTTTGGCATCTACATTaGCTCCTTTGTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLLWHLH*LLCSAM
Trigger: CATTGCTGAACAAAGGAGCAAATGTAGATGCCAAAG...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTGTCCACAGAATTGACTaGAGCATTATGGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSIVHRID*SIMAEQ
Trigger: CTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGAC...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAGCTGCGTTGGTTGCATaGATGAGGTTTCTATCTGTT +
Preference number: 5 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRAALVA*MRFLSV
Trigger: AACAGATAGAAACCTCATCAATGCAACCAACGCAGC...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCTACTGCAAGCACACTaGCTCCTTTTCCCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: VESLGSVQGGKITLVEGTLLQAH*LLFPKV
Trigger: AACTTTTGGGAAAAGGAGCAAGTGTGCTTGCAGTAG...AGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGATTCTCAGGGTTCTCTaGGAGGACAGACCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQILRVL*EDRPRP
Trigger: GGGCCTGGGTCTGTCCTCCAAGAGAACCCTGAGAAT...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTCCTGCTTTGAGATGAGTGTCTaGTTAAAGGAGGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: VTWKCSRWKDHPCRRDSCFEMSV*LKEVIC
Trigger: GCAAATGACCTCCTTTAACAAGACACTCATCTCAAA...GCAGGAGTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp ATGCAGTCCTCCCTGCTCGATCAGATACGTTTACATTACTCAGAAGAGGTACCACTCTGGTGGAGGCAGTaGTACTGTTTCAATTCCAAT +
Preference number: 5 (lower is better)
Translates to: MQSSLLDQIRLHYSEEVPLWWRQ*YCFNSN
Trigger: ATTGGAATTGAAACAGTACAACTGCCTCCACCAGAG...TGGTACCTCTTCTGAGTAATGTAAACGTATCTGATCGAGCAGGGAGGACTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS TCA 90 bp GACAAGAGTAGTTTGACCATCTCACCATGTCCACTGAAAGCTGCATaGTGTAATGCAGTCCTCCCTGCTCGATCAGATACGTTTACATTA +
Preference number: 5 (lower is better)
Translates to: DKSSLTISPCPLKAA*CNAVLPARSDTFTL
Trigger: TAATGTAAACGTATCTGATCGAGCAGGGAGGACTGCATTACATCATGCAGCTTTCAGTGGACATGGTGAGATGGTCAAACTACTCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000460278.5
ENST00000476472.5
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS GCA 90 bp ACTTGTAATAAGAGTGTTGATCAGCAGCTCATGGCCATACCGTGCTaGTATGTGCAAAGGGGTATTTCCATTCTTATCCTCACAGTCGAT +
Preference number: 5 (lower is better)
Translates to: TCNKSVDQQLMAIPC*YVQRGISILILTVD
Trigger: ATCGACTGTGAGGATAAGAATGGAAATACCCCTTTGCACATAGCAGCACGGTATGGCCATGAGCTGCTGATCAACACTCTTATTACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000492895.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS CCA 90 bp CATGGAGAGGAGTTCTTCCTTTTGAATCTGTGGCGTTCACAATGCTaGCACCTAATGTATCAATTAACATCTCAGCAGCACCTTCGTTGT +
Preference number: 5 (lower is better)
Translates to: HGEEFFLLNLWRSQC*HLMYQLTSQQHLRC
Trigger: ACAACGAAGGTGCTGCTGAGATGTTAATTGATACATTAGGTGCCAGCATTGTGAACGCCACAGATTCAAAAGGAAGAACTCCTCTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000624145.3
ENST00000683139.1
CDS-3UTR CAA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTCTAGACAAGAGTAGTTaGACCATCTCACCATGTCCA +
Preference number: 5 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSILDKSS*TISPCP
Trigger: TGGACATGGTGAGATGGTCAAACTACTCTTGTCTAG...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGATTCACTACAACATCTaGTCCATTATAGCAGGCTAC +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLIHYNI*SIIAGY
Trigger: GTAGCCTGCTATAATGGACAAGATGTTGTAGTGAAT...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGACTGTCCATTTCCATCTaGAATATCCACTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGLSISI*NIHCIL
Trigger: CAGAATGCAGTGGATATTCAAGATGGAAATGGACAG...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGAACATGCAGAGGTGTTaGCAAGGCTGCGTTGGTTGC +
Preference number: 5 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVNMQRC*QGCVGC
Trigger: GCAACCAACGCAGCCTTGCAAACACCTCTGCATGTT...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTCAGCCACATCCTTATaGGGAGCACAGGCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVSATSL*GAQAKA
Trigger: AGCTTTGGCCTGTGCTCCCAATAAGGATGTGGCTGA...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGCCATTCATAGAGAGGTaGAAGACTCCATGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGPFIER*KTPCPR
Trigger: CCTGGGGCATGGAGTCTTCAACCTCTCTATGAATGG...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp GGTAGAGTCACTTGGAAGTGTTCAAGGTGGAAAGATCACCCTTGTAGAAGGGACTTTGAGATGAGTGTCTaGTTAAAGGAGGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: GRVTWKCSRWKDHPCRRDFEMSV*LKEVIC
Trigger: GCAAATGACCTCCTTTAACAAGACACTCATCTCAAA...GTCCCTTCTACAAGGGTGATCTTTCCACCTTGAACACTTCCAAGTGACTCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGTCAAAAGCATTAATATaGGCACCTCTAGACAAGAGT +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLSKALI*APLDKS
Trigger: ACTCTTGTCTAGAGGTGCCAATATTAATGCTTTTGA...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGGCACGCCTATCTTTCTaGTCAAAAGCATTAATATTG +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLARLSF*SKALIL
Trigger: CAATATTAATGCTTTTGACAAGAAAGATAGGCGTGC...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAGATCTAGAAGGTACTaGACTACGCTGATCATTCCA +
Preference number: 5 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTRSRRY*TTLIIP
Trigger: TGGAATGATCAGCGTAGTCAAGTACCTTCTAGATCT...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTCTTGGAGGACAGAATTCACTACAACATCTaGTCCATTATAGCAGGCTAC +
Preference number: 5 (lower is better)
Translates to: RMCEIHPSNILRVLLEDRIHYNI*SIIAGY
Trigger: GTAGCCTGCTATAATGGACAAGATGTTGTAGTGAAT...TCTGTCCTCCAAGAGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GAGAAGACATGGCAGAATGTGCGAGATTCATCCTTCCAACATTCTCAGGGTTCTATTCACTACAACATCTaGTCCATTATAGCAGGCTAC +
Preference number: 5 (lower is better)
Translates to: EKTWQNVRDSSFQHSQGSIHYNI*SIIAGY
Trigger: GTAGCCTGCTATAATGGACAAGATGTTGTAGTGAAT...AGAACCCTGAGAATGTTGGAAGGATGAATCTCGCACATTCTGCCATGTCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTTCCCTGTAGAGTCCACAGAATTGACTTGAGCATTATGGCTGAGCAGCAGCTGGTAAAGGGCTTATTGTaGCTCTATTATCTGAATCAC +
Preference number: 5 (lower is better)
Translates to: FPCRVHRIDLSIMAEQQLVKGLL*LYYLNH
Trigger: GTGATTCAGATAATAGAGCAACAATAAGCCCTTTAC...CAGCTGCTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGACTCTACAGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS-3UTR CAA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGCAGTCTGTGTGCCCGTaGAGAACAGATAGCATCAGA +
Preference number: 5 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVQSVCP*RTDSIR
Trigger: TCTGATGCTATCTGTTCTCAACGGGCACACAGACTG...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp ACAAGTATTTTCACCCGTATTGCACCCAGTCAGCTGGTTTTTAATTCTAATAGTAACATGCAGAGGTGTTaGCAAGGCTGCGTTGGTTGC +
Preference number: 5 (lower is better)
Translates to: TSIFTRIAPSQLVFNSNSNMQRC*QGCVGC
Trigger: GCAACCAACGCAGCCTTGCAAACACCTCTGCATGTT...ACTATTAGAATTAAAAACCAGCTGACTGGGTGCAATACGGGTGAAAATACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp AAACAGGGCAACAGCCTGACCCCAATCCATCTCAATGTCTATGTCACAAGTATTATGATAAAGGACTACTaGATGAGACAGGCATCATGG +
Preference number: 5 (lower is better)
Translates to: KQGNSLTPIHLNVYVTSIMIKDY*MRQASW
Trigger: CCATGATGCCTGTCTCATCAAGTAGTCCTTTATCAT...AATACTTGTGACATAGACATTGAGATGGATTGGGGTCAGGCTGTTGCCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCTCAGAATCGGAGTCGTaGAGCTCATCCACGTCAGTG +
Preference number: 5 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFSESES*SSSTSV
Trigger: CACTGACGTGGATGAGCTCAACGACTCCGATTCTGA...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCTCAGATCTCTTAACATaGGCTCACTGTGGGATCTTT +
Preference number: 5 (lower is better)
Translates to: FKYHLRQYFGVSLHWVQTSDLLT*AHCGIF
Trigger: AAAGATCCCACAGTGAGCCAATGTTAAGAGATCTGA...GGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGCCATTCATAGAGAGGTaGAAGACTCCATGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQPFIER*KTPCPR
Trigger: CCTGGGGCATGGAGTCTTCAACCTCTCTATGAATGG...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAGTTAAAGGAGGTCATTaGCTATTACCACCATTTCAC +
Preference number: 5 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGVKGGH*LLPPFH
Trigger: GTGAAATGGTGGTAATAGCAAATGACCTCCTTTAAC...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS GCA 90 bp AGAAACAACTGCTGTGACAGAGATGATCACAGCGATACCCACTCTTaGCTGCAAGGTCATATAGTTACCAGTAGCTGTTTTGCTTATAAT +
Preference number: 5 (lower is better)
Translates to: RNNCCDRDDHSDTHS*LQGHIVTSSCFAYN
Trigger: ATTATAAGCAAAACAGCTACTGGTAACTATATGACCTTGCAGGCAAGAGTGGGTATCGCTGTGATCATCTCTGTCACAGCAGTTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461696.1
ENST00000683139.1
CDS-3UTR CAA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGAGCACGCCTATCTTTCTaGTCAAAAGCATTAATATTG +
Preference number: 5 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGARLSF*SKALIL
Trigger: CAATATTAATGCTTTTGACAAGAAAGATAGGCGTGC...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTAAGTATTCCAGGCACTaGCCATCTGTGTCTGATGTA +
Preference number: 5 (lower is better)
Translates to: NNTGVVQIPFETVLWGFPKYSRH*PSVSDV
Trigger: TACATCAGACACAGATGGCAAGTGCCTGGAATACTT...AGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCCAACACTTCCAGTGCTaGATGGTGACCATGATAGGC +
Preference number: 5 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFQHFQC*MVTMIG
Trigger: GCCTATCATGGTCACCATCAAGCACTGGAAGTGTTG...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTCTTCCCCACTTATCTTaGGCATCTACATTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: NNTGVVQIPFETVLWGFPLPHLS*ASTFAP
Trigger: AGGAGCAAATGTAGATGCCAAAGATAAGTGGGGAAG...AGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GGCAGACTCTCACAGATGGATTACAAAAGTAATGAAATAGTTTTCTTAGTGGGGGTCCACAGAATTGACTaGAGCATTATGGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: GRLSQMDYKSNEIVFLVGVHRID*SIMAEQ
Trigger: CTGCTCAGCCATAATGCTCAAGTCAATTCTGTGGAC...CCCCACTAAGAAAACTATTTCATTACTTTTGTAATCCATCTGTGAGAGTCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTCTACTGCAAGCACACTaGCTCCTTTTCCCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: NNTGVVQIPFETVLWGFPLLQAH*LLFPKV
Trigger: AACTTTTGGGAAAAGGAGCAAGTGTGCTTGCAGTAG...AGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TACCATTTGAGACAGTACTTTGGGGTTTCCCTTCATTGGGTGCAGACCAAAGGACTTTATAGCTACACCTaGGATTTCATTAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: YHLRQYFGVSLHWVQTKGLYSYT*DFIRCG
Trigger: ACCACATCTAATGAAATCCAAGGTGTAGCTATAAAG...TCCTTTGGTCTGCACCCAATGAAGGGAAACCCCAAAGTACTGTCTCAAATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTCTTTGGCATCTACATTaGCTCCTTTGTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: NNTGVVQIPFETVLWGFPLWHLH*LLCSAM
Trigger: CATTGCTGAACAAAGGAGCAAATGTAGATGCCAAAG...AGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATCTTTACTCTTCATATaGACATCGGCCCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYISLLFI*TSAPLP
Trigger: TGGCAATGGGGCCGATGTCAATATGAAGAGTAAAGA...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATACTTGTAATAAGAGTGTaGATCAGCAGCTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYILVIRV*ISSSWP
Trigger: TGGCCATGAGCTGCTGATCAACACTCTTATTACAAG...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGAAAGTATTCCAGGCACTaGCCATCTGTGTCTGATGTA +
Preference number: 5 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRKYSRH*PSVSDV
Trigger: TACATCAGACACAGATGGCAAGTGCCTGGAATACTT...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GAATGCTTTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGCTAGAGGAGTTTCACTaGCAATCAGCTGAAGACATA +
Preference number: 5 (lower is better)
Translates to: ECFRHTRCNHKGNFYGAVLEEFH*QSAEDI
Trigger: TATGTCTTCAGCTGATTGCAAGTGAAACTCCTCTAG...CACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAAAGCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp ACAAGTATTTTCACCCGTATTGCACCCAGTCAGCTGGTTTTTAATTCTAATAGTCTTCCCCACTTATCTTaGGCATCTACATTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: TSIFTRIAPSQLVFNSNSLPHLS*ASTFAP
Trigger: AGGAGCAAATGTAGATGCCAAAGATAAGTGGGGAAG...ACTATTAGAATTAAAAACCAGCTGACTGGGTGCAATACGGGTGAAAATACTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATTCAGCAGCACCTTCGTaGTCATTTATCACGGCACAA +
Preference number: 5 (lower is better)
Translates to: VAFARTTLMFLVTASFTYSAAPS*SFITAQ
Trigger: TTGTGCCGTGATAAATGACAACGAAGGTGCTGCTGA...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATTCAGCAGCACCTTCGTaGTCATTTATCACGGCACAA +
Preference number: 5 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNSAAPS*SFITAQ
Trigger: TTGTGCCGTGATAAATGACAACGAAGGTGCTGCTGA...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGAGAGGAGTTCTTCCTTTaGAATCTGTGGCGTTCACAA +
Preference number: 5 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIREEFFL*NLWRSQ
Trigger: TTGTGAACGCCACAGATTCAAAAGGAAGAACTCCTC...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATGTTTGCAAGGCTGCGTaGGTTGCATTGATGAGGTTT +
Preference number: 5 (lower is better)
Translates to: VAFARTTLMFLVTASFTYVCKAA*VALMRF
Trigger: AAACCTCATCAATGCAACCAACGCAGCCTTGCAAAC...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATGTATTTTCACCCGTATaGCACCCAGTCAGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: VAFARTTLMFLVTASFTYVFSPV*HPVSWF
Trigger: AAACCAGCTGACTGGGTGCAATACGGGTGAAAATAC...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATTCTTTACTCTTCATATaGACATCGGCCCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: VAFARTTLMFLVTASFTYSLLFI*TSAPLP
Trigger: TGGCAATGGGGCCGATGTCAATATGAAGAGTAAAGA...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp CATTTCACCCAAAGTAGTTCTAGAGCAGAAGCTGGTATTATAATACACATCAGACTAGAGGAGTTTCACTaGCAATCAGCTGAAGACATA +
Preference number: 5 (lower is better)
Translates to: HFTQSSSRAEAGIIIHIRLEEFH*QSAEDI
Trigger: TATGTCTTCAGCTGATTGCAAGTGAAACTCCTCTAG...TCTGATGTGTATTATAATACCAGCTTCTGCTCTAGAACTACTTTGGGTGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGCTGTCCATTTCCATCTaGAATATCCACTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQLSISI*NIHCIL
Trigger: CAGAATGCAGTGGATATTCAAGATGGAAATGGACAG...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATGAGGAGTTCTTCCTTTaGAATCTGTGGCGTTCACAA +
Preference number: 5 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNEEFFL*NLWRSQ
Trigger: TTGTGAACGCCACAGATTCAAAAGGAAGAACTCCTC...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATGCTGCGTTGGTTGCATaGATGAGGTTTCTATCTGTT +
Preference number: 5 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNAALVA*MRFLSV
Trigger: AACAGATAGAAACCTCATCAATGCAACCAACGCAGC...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATCTACTGCAAGCACACTaGCTCCTTTTCCCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNLLQAH*LLFPKV
Trigger: AACTTTTGGGAAAAGGAGCAAGTGTGCTTGCAGTAG...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATAATGATAAAGGACTACTaGATGAGACAGGCATCATGG +
Preference number: 5 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYIMIKDY*MRQASW
Trigger: CCATGATGCCTGTCTCATCAAGTAGTCCTTTATCAT...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCTCAGATCTCTTAACATaGGCTCACTGTGGGATCTTT +
Preference number: 5 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFSDLLT*AHCGIF
Trigger: AAAGATCCCACAGTGAGCCAATGTTAAGAGATCTGA...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AACAATACTGGCGTAGTTCAAATACCATTTGAGACAGTACTTTGGGGTTTCCCTAGTTATTTGGTCCTTTaGCAATTTGCTGTGCACATA +
Preference number: 5 (lower is better)
Translates to: NNTGVVQIPFETVLWGFPSYLVL*QFAVHI
Trigger: TATGTGCACAGCAAATTGCAAAAGGACCAAATAACT...AGGGAAACCCCAAAGTACTGTCTCAAATGGTATTTGAACTACGCCAGTATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATAAGGTAGTCTTCAATTaGGCAGGCAACTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNKVVFN*AGNCFS
Trigger: AGAGAAGCAGTTGCCTGCCAAATTGAAGACTACCTT...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS TCA 90 bp CTGTCACTTAAGACTGTACTCTGGTTTTCGAAATACGCCCTTCTGTaGTGCAACAATTATTTATCGAAACTTACTGTCCATTTCCATCTT +
Preference number: 5 (lower is better)
Translates to: LSLKTVLWFSKYALL*CNNYLSKLTVHFHL
Trigger: AAGATGGAAATGGACAGTAAGTTTCGATAAATAATTGTTGCATCACAGAAGGGCGTATTTCGAAAACCAGAGTACAGTCTTAAGTGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498524.5
CDS-3UTR CAA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATAACCATTTGCTGTCTTaGGCATTAACTCTAGCTCCA +
Preference number: 5 (lower is better)
Translates to: VAFARTTLMFLVTASFTYNHLLS*ALTLAP
Trigger: TGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTT...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATAATTCACTACAACATCTaGTCCATTATAGCAGGCTAC +
Preference number: 5 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYIIHYNI*SIIAGY
Trigger: GTAGCCTGCTATAATGGACAAGATGTTGTAGTGAAT...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCTCAAAAGCATTAATATaGGCACCTCTAGACAAGAGT +
Preference number: 5 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFSKALI*APLDKS
Trigger: ACTCTTGTCTAGAGGTGCCAATATTAATGCTTTTGA...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GGTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATCAAAAGCATTAATATaGGCACCTCTAGACAAGAGT +
Preference number: 5 (lower is better)
Translates to: GGIRKNYLNVFGNSIIYISKALI*APLDKS
Trigger: ACTCTTGTCTAGAGGTGCCAATATTAATGCTTTTGA...TATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp TTAGACATACAAGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCGCACGCCTATCTTTCTaGTCAAAAGCATTAATATTG +
Preference number: 5 (lower is better)
Translates to: LDIQGVTIKEISTVLCSFARLSF*SKALIL
Trigger: CAATATTAATGCTTTTGACAAGAAAGATAGGCGTGC...GAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCTTGTATGTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp ACAAGTATTTTCACCCGTATTGCACCCAGTCAGCTGGTTTTTAATTCTAATAGTGCACGCCTATCTTTCTaGTCAAAAGCATTAATATTG +
Preference number: 5 (lower is better)
Translates to: TSIFTRIAPSQLVFNSNSARLSF*SKALIL
Trigger: CAATATTAATGCTTTTGACAAGAAAGATAGGCGTGC...ACTATTAGAATTAAAAACCAGCTGACTGGGTGCAATACGGGTGAAAATACTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399451.6
ENST00000624145.3
CDS-3UTR CAA 90 bp AGATGTGGTAAATCTAATAGTGTGTCAAATGAGTCCTTCTGGAAATCACTTCAGGTAAAGGGCTTATTGTaGCTCTATTATCTGAATCAC +
Preference number: 5 (lower is better)
Translates to: RCGKSNSVSNESFWKSLQVKGLL*LYYLNH
Trigger: GTGATTCAGATAATAGAGCAACAATAAGCCCTTTAC...CTGAAGTGATTTCCAGAAGGACTCATTTGACACACTATTAGATTTACCACATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp GTGGCATTCGCAAGAACTACCTTAATGTTTTTGGTAACAGCATCATTTACATATTTTGAGATGAGTGTCTaGTTAAAGGAGGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: VAFARTTLMFLVTASFTYFEMSV*LKEVIC
Trigger: GCAAATGACCTCCTTTAACAAGACACTCATCTCAAA...ATATGTAAATGATGCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS-3UTR CAA 90 bp AGGTGTAACCATAAAGGAAATTTCTACGGTGCTGTGTTCATTCATTCAAGTAATGTAAAGGGCTTATTGTaGCTCTATTATCTGAATCAC +
Preference number: 5 (lower is better)
Translates to: RCNHKGNFYGAVFIHSSNVKGLL*LYYLNH
Trigger: GTGATTCAGATAATAGAGCAACAATAAGCCCTTTAC...ATTACTTGAATGAATGAACACAGCACCGTAGAAATTTCCTTTATGGTTACACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000624145.3
CDS GCA 72 bp CCGGCCCACTGCTCCCGCCCCAGTAGCCTTGGCCGCTaGCCGGGACCAGCGGGTCCGCGGCCGACTGCGCTG +
Preference number: 6 (lower is better)
Translates to: PAHCSRPSSLGR*PGPAGPRPTAL
Trigger: CAGCGCAGTCGGCCGCGGACCCGCTGGTCCCGGGCAGCGGCCAAGGCTACTGGGGCGGGAGCAGTGGGCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399451.6
CDS CAA 90 bp TGGGGGCAGGGAGAGCAGAACCTCTGTGCAGTGCACTGTCACACCTaGTCAACGTGTAGCTCGGCATCAAGCTCAGCCATAGGTCCCATC +
Preference number: 6 (lower is better)
Translates to: WGQGEQNLCAVHCHT*STCSSASSSAIGPI
Trigger: GATGGGACCTATGGCTGAGCTTGATGCCGAGCTACACGTTGACAAGGTGTGACAGTGCACTGCACAGAGGTTCTGCTCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498713.1
CDS CAA 72 bp GCAAGGCAGAGCGTTCATTCTTTCTCCATCAGGCAGTaGTCTGTGGCTGCTCCAGCAAAAGGGCACAGGCAC +
Preference number: 6 (lower is better)
Translates to: ARQSVHSFSIRQ*SVAAPAKGHRH
Trigger: GTGCCTGTGCCCTTTTGCTGGAGCAGCCACAGACAACTGCCTGATGGAGAAAGAATGAACGCTCTGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461696.1
ENST00000683139.1
CDS CAA 72 bp GGAGAGCAGAACCTCTGTGCAGTGCACTGTCACACCTaGTCAACGTGTAGCTCGGCATCAAGCTCAGCCATA +
Preference number: 6 (lower is better)
Translates to: GEQNLCAVHCHT*STCSSASSSAI
Trigger: TATGGCTGAGCTTGATGCCGAGCTACACGTTGACAAGGTGTGACAGTGCACTGCACAGAGGTTCTGCTCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498713.1
CDS CCA 72 bp CTGCAGCAATCTGAAAAGCCGCTTAAGGCTGCCAAATaGAGGGGGAACATTCCATGTATGCCACGCTTTGCA +
Preference number: 6 (lower is better)
Translates to: LQQSEKPLKAAK*RGNIPCMPRFA
Trigger: TGCAAAGCGTGGCATACATGGAATGTTCCCCCTCCATTTGGCAGCCTTAAGCGGCTTTTCAGATTGCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000492895.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS CCA 72 bp GCATTATGGCTGAGCAGCAGCTGTAAACACTCTACATaGTCTGTGAAGGCGGCTGCATGGAGAGGAGTTCTT +
Preference number: 6 (lower is better)
Translates to: ALWLSSSCKHST*SVKAAAWRGVL
Trigger: AAGAACTCCTCTCCATGCAGCCGCCTTCACAGACCATGTAGAGTGTTTACAGCTGCTGCTCAGCCATAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000624145.3
ENST00000683139.1
CDS CCA 72 bp GCATTATGGCTGAGCAGCAGCTGTAAACACTCTACATaGTCTGTGAAGGCGGCTGCATGGAGAGGAGTTCAT +
Preference number: 6 (lower is better)
Translates to: ALWLSSSCKHST*SVKAAAWRGVH
Trigger: ATGAACTCCTCTCCATGCAGCCGCCTTCACAGACCATGTAGAGTGTTTACAGCTGCTGCTCAGCCATAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS CAA 90 bp CATAGTGCAGGGGTGTGCAGCCTCTTTCATCAAGGTCATTCACACTaGCTCCTGATCCCACAAGAGCAAACAGGCACTGGTAATTGCAGT +
Preference number: 6 (lower is better)
Translates to: HSAGVCSLFHQGHSH*LLIPQEQTGTGNCS
Trigger: ACTGCAATTACCAGTGCCTGTTTGCTCTTGTGGGATCAGGAGCAAGTGTGAATGACCTTGATGAAAGAGGCTGCACACCCCTGCACTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS CAA 90 bp CTGCAAGCACACTTGCTCCTTTTCCCAAAAGTTCCTGAACCACCATaGTTAGCCCATTTCGGGCAGCAACATGCAGAGGTGTTTGCAAGG +
Preference number: 6 (lower is better)
Translates to: LQAHLLLFPKVPEPP*LAHFGQQHAEVFAR
Trigger: CCTTGCAAACACCTCTGCATGTTGCTGCCCGAAATGGGCTAACAATGGTGGTTCAGGAACTTTTGGGAAAAGGAGCAAGTGTGCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000624145.3
ENST00000683139.1
CDS TCA 72 bp CCTCAGCCTCTCAGTAGGTCTCAGAATCGGAGTCGTTaGGCTCATCCACGTCAGTGTATAAGTACTCCTGTT +
Preference number: 6 (lower is better)
Translates to: PQPLSRSQNRSR*AHPRQCISTPV
Trigger: AACAGGAGTACTTATACACTGACGTGGATGAGCTCAACGACTCCGATTCTGAGACCTACTGAGAGGCTGAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000498713.1
ENST00000624145.3
ENST00000683139.1
CDS TCA 72 bp TCAGTCCCACAGAAGCATTCCAACGGAGCAACAGTCTaGAGAGCAAAGACTGCAGACCCACAGGATGAAATG +
Preference number: 6 (lower is better)
Translates to: SVPQKHSNGATV*RAKTADPQDEM
Trigger: CATTTCATCCTGTGGGTCTGCAGTCTTTGCTCTTCAGACTGTTGCTCCGTTGGAATGCTTCTGTGGGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461696.1
ENST00000683139.1
CDS CCA 72 bp TGTAAACACTCTACATGGTCTGTGAAGGCGGCTGCATaGAGAGGAGTTCATTGTAGCAAGCCCAGTGAAGTG +
Preference number: 6 (lower is better)
Translates to: CKHSTWSVKAAA*RGVHCSKPSEV
Trigger: CACTTCACTGGGCTTGCTACAATGAACTCCTCTCCATGCAGCCGCCTTCACAGACCATGTAGAGTGTTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451422.1
CDS CAA 72 bp CACTTGCTCCTTTTCCCAAAAGTTCCTGAACCACCATaGTTAGCCCATTTCGGGCAGCAACATGCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: HLLLFPKVPEPP*LAHFGQQHAEV
Trigger: CACCTCTGCATGTTGCTGCCCGAAATGGGCTAACAATGGTGGTTCAGGAACTTTTGGGAAAAGGAGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000624145.3
ENST00000683139.1
CDS CAA 72 bp CACTTGCTCCTTTTCCCAAAAGTTCCTGAACCACCATaGTTAGCCCATTTCGGGCAGCAACATGCAGAGGTC +
Preference number: 6 (lower is better)
Translates to: HLLLFPKVPEPP*LAHFGQQHAEV
Trigger: GACCTCTGCATGTTGCTGCCCGAAATGGGCTAACAATGGTGGTTCAGGAACTTTTGGGAAAAGGAGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498713.1
CDS TCA 72 bp ACAGTCGATTACAGCTCCACTCTGGATAATGGTTTGTaGTCGGGAGAATCTACCGTGGAGAGCAGTCATGTG +
Preference number: 6 (lower is better)
Translates to: TVDYSSTLDNGL*SGESTVESSHV
Trigger: CACATGACTGCTCTCCACGGTAGATTCTCCCGATCACAAACCATTATCCAGAGTGGAGCTGTAATCGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS TCA 72 bp GCAGCCTCTTTCATCAAGGTCATTCACACTTGCTCCTaGTCCCACAAGAGCAAACAGGCACTGGTAATTGCA +
Preference number: 6 (lower is better)
Translates to: AASFIKVIHTCS*SHKSKQALVIA
Trigger: TGCAATTACCAGTGCCTGTTTGCTCTTGTGGGATCAGGAGCAAGTGTGAATGACCTTGATGAAAGAGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS TCA 72 bp ACTGCAAGCACACTTGCTCCTTTTCCCAAAAGTTCCTaGACCACCATTGTTAGCCCATTTCGGGCAGCAACA +
Preference number: 6 (lower is better)
Translates to: TASTLAPFPKSS*TTIVSPFRAAT
Trigger: TGTTGCTGCCCGAAATGGGCTAACAATGGTGGTTCAGGAACTTTTGGGAAAAGGAGCAAGTGTGCTTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000498713.1
ENST00000624145.3
ENST00000683139.1
CDS GCA 72 bp TTGATCAGCAGCTCATGGCCATACCGTGCTGCTATGTaGAAAGGGGTATTTCCATTCTTATCCTCACAGTCG +
Preference number: 6 (lower is better)
Translates to: LISSSWPYRAAM*KGVFPFLSSQS
Trigger: CGACTGTGAGGATAAGAATGGAAATACCCCTTTGCACATAGCAGCACGGTATGGCCATGAGCTGCTGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000492895.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS CCA 72 bp TGTAAACACTCTACATGGTCTGTGAAGGCGGCTGCATaGAGAGGAGTTCTTCCTTTTGAATCTGTGGCGTTC +
Preference number: 6 (lower is better)
Translates to: CKHSTWSVKAAA*RGVLPFESVAF
Trigger: GAACGCCACAGATTCAAAAGGAAGAACTCCTCTCCATGCAGCCGCCTTCACAGACCATGTAGAGTGTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000624145.3
ENST00000683139.1
CDS CAA 72 bp GCCCCTCTATGCAACGCTGTCCTTCCCCACTTATCTTaGGCATCTACATTTGCTCCTTTGTTCAGCAATGAG +
Preference number: 6 (lower is better)
Translates to: APLCNAVLPHLS*ASTFAPLFSNE
Trigger: CTCATTGCTGAACAAAGGAGCAAATGTAGATGCCAAAGATAAGTGGGGAAGGACAGCGTTGCATAGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000463533.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS CAA 90 bp CTCTATGCAACGCTGTCCTTCCCCACTTATCTTTGGCATCTACATTaGCTCCTTTGTTCAGCAATGAGTAAACACAGTCTGTGTGCCCGT +
Preference number: 6 (lower is better)
Translates to: LYATLSFPTYLWHLH*LLCSAMSKHSLCAR
Trigger: ACGGGCACACAGACTGTGTTTACTCATTGCTGAACAAAGGAGCAAATGTAGATGCCAAAGATAAGTGGGGAAGGACAGCGTTGCATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000463533.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS TCA 72 bp TGTTCAGCAATGAGTAAACACAGTCTGTGTGCCCGTTaGGAACAGATAGCATCAGAGGCGTCTGTCCATTTC +
Preference number: 6 (lower is better)
Translates to: CSAMSKHSLCAR*EQIASEASVHF
Trigger: GAAATGGACAGACGCCTCTGATGCTATCTGTTCTCAACGGGCACACAGACTGTGTTTACTCATTGCTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000463533.1
ENST00000497037.5
ENST00000624145.3
ENST00000683139.1
CDS GCA 72 bp AAGAGTGTTGATCAGCAGCTCATGGCCATACCGTGCTaGTATGTGCAAAGGGGTATTTCCATTCTTATCCTC +
Preference number: 6 (lower is better)
Translates to: KSVDQQLMAIPC*YVQRGISILIL
Trigger: GAGGATAAGAATGGAAATACCCCTTTGCACATAGCAGCACGGTATGGCCATGAGCTGCTGATCAACACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000492895.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS GCA 72 bp GCTCGAACTTCATCAGGATCTCCGTTAAATATAGCTTaGACCAGTGATGGCAGAGATCTGAGCTACTTCTCG +
Preference number: 6 (lower is better)
Translates to: ARTSSGSPLNIA*TSDGRDLSYFS
Trigger: CGAGAAGTAGCTCAGATCTCTGCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497037.5
ENST00000624145.3
CDS CCA 72 bp GCACCACTTGTAATAAGAGTGTTGATCAGCAGCTCATaGCCATACCGTGCTGCTATGTGCAAAGGGGTATTT +
Preference number: 6 (lower is better)
Translates to: APLVIRVLISSS*PYRAAMCKGVF
Trigger: AAATACCCCTTTGCACATAGCAGCACGGTATGGCCATGAGCTGCTGATCAACACTCTTATTACAAGTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000492895.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS CCA 72 bp CCCCTCTATGCAACGCTGTCCTTCCCCACTTATCTTTaGCATCTACATTTGCTCCTTTGTTCAGCAATGAGT +
Preference number: 6 (lower is better)
Translates to: PLYATLSFPTYL*HLHLLLCSAMS
Trigger: ACTCATTGCTGAACAAAGGAGCAAATGTAGATGCCAAAGATAAGTGGGGAAGGACAGCGTTGCATAGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000463533.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS CAA 72 bp CGGGCAGCAACATGCAGAGGTGTTTGCAAGGCTGCGTaGGTTGCATTGATGAGGTTTCTATCTGTTATCTTT +
Preference number: 6 (lower is better)
Translates to: RAATCRGVCKAA*VALMRFLSVIF
Trigger: AAAGATAACAGATAGAAACCTCATCAATGCAACCAACGCAGCCTTGCAAACACCTCTGCATGTTGCTGCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000624145.3
ENST00000683139.1
CDS TCA 72 bp CCCCTGCTATCCCGAAGTAAGCACTTAGCACCATGTTaGAGTAATGCATCTACACATTCTTCATGGCCTGTA +
Preference number: 6 (lower is better)
Translates to: PLLSRSKHLAPC*SNASTHSSWPV
Trigger: TACAGGCCATGAAGAATGTGTAGATGCATTACTTCAACATGGTGCTAAGTGCTTACTTCGGGATAGCAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000463533.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS GCA 72 bp AATTCCCTCCAGCTGCAGCTGCATGTAGACAAGTCCTaGCAAAATCATCTGGGGTATCTATATCAAATCCTG +
Preference number: 6 (lower is better)
Translates to: NSLQLQLHVDKS*QNHLGYLYQIL
Trigger: CAGGATTTGATATAGATACCCCAGATGATTTTGGCAGGACTTGTCTACATGCAGCTGCAGCTGGAGGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000492895.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS GCA 72 bp TGCTGTGACAGAGATGATCACAGCGATACCCACTCTTaGCTGCAAGGTCATATAGTTACCAGTAGCTGTTTT +
Preference number: 6 (lower is better)
Translates to: CCDRDDHSDTHS*LQGHIVTSSCF
Trigger: AAAACAGCTACTGGTAACTATATGACCTTGCAGGCAAGAGTGGGTATCGCTGTGATCATCTCTGTCACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461696.1
ENST00000683139.1
CDS CAA 72 bp AGGAATTCCCATACTATTTTCCTCTGGTGGAGGCAGTaGTACTGTTTCAATTCCAATCACAGGCCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: RNSHTIFLWWRQ*YCFNSNHRPGH
Trigger: GTGACCAGGCCTGTGATTGGAATTGAAACAGTACAACTGCCTCCACCAGAGGAAAATAGTATGGGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439830.5
CDS CAA 72 bp GTCGATTACAGCTCCTTCATATTGACATCGGCCCCATaGCCAACTAGAAGCTCTAAACACAATGCTCCATGT +
Preference number: 6 (lower is better)
Translates to: VDYSSFILTSAP*PTRSSKHNAPC
Trigger: ACATGGAGCATTGTGTTTAGAGCTTCTAGTTGGCAATGGGGCCGATGTCAATATGAAGGAGCTGTAATCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492895.1
CDS GCA 72 bp AATAAGAGTGTTGATCAGCAGCTCATGGCCATACCGTaGTGCTATGTGCAAAGGGGTATTTCCATTCTTATC +
Preference number: 6 (lower is better)
Translates to: NKSVDQQLMAIP*CYVQRGISILI
Trigger: GATAAGAATGGAAATACCCCTTTGCACATAGCAGCACGGTATGGCCATGAGCTGCTGATCAACACTCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000492895.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS GCA 72 bp TCTGAAGAGCAAAGACTGCAGACCCACAGGATGAAATaGCTAGTAATGCTCACATGTTACACTTACCAGAGA +
Preference number: 6 (lower is better)
Translates to: SEEQRLQTHRMK*LVMLTCYTYQR
Trigger: TCTCTGGTAAGTGTAACATGTGAGCATTACTAGGCATTTCATCCTGTGGGTCTGCAGTCTTTGCTCTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461696.1
ENST00000683139.1
CDS GCA 72 bp GCTCGAACTTCATCAGGATCTCCGTTAAATATAGCTTaGACCAGTGATGGCAATACATTTCCAGAAGGTGGA +
Preference number: 6 (lower is better)
Translates to: ARTSSGSPLNIA*TSDGNTFPEGG
Trigger: TCCACCTTCTGGAAATGTATTGCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461696.1
ENST00000683139.1
CDS CAA 72 bp GGTTCATTCATATCAACTCCAAGATCTAGAAGGTACTaGACTACGCTGATCATTCCACTAGAGGCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: GSFISTPRSRRY*TTLIIPLEAAA
Trigger: TGCAGCAGCCTCTAGTGGAATGATCAGCGTAGTCAAGTACCTTCTAGATCTTGGAGTTGATATGAATGAACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000476472.5
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS CAA 72 bp GGTGACCATGATAGGCAGCCAAGTGTAAAGGGCTTATaGTTGCTCTATTATCTGAATCACTCAGCATGTCTG +
Preference number: 6 (lower is better)
Translates to: GDHDRQPSVKGL*LLYYLNHSACL
Trigger: CAGACATGCTGAGTGATTCAGATAATAGAGCAACAATAAGCCCTTTACACTTGGCTGCCTATCATGGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000462657.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS TCA 72 bp ATCTTTGGCATCTACATTTGCTCCTTTGTTCAGCAATaGGTAAACACAGTCTGTGTGCCCGTTGAGAACAGA +
Preference number: 6 (lower is better)
Translates to: IFGIYICSFVQQ*VNTVCVPVENR
Trigger: TCTGTTCTCAACGGGCACACAGACTGTGTTTACTCATTGCTGAACAAAGGAGCAAATGTAGATGCCAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000463533.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS TCA 72 bp AGAACACCTTTGACAACTAGTGTCTTGGCTTTAGCATaGCAAAGGACAGGAGTGAGCCTACGTACTAAGTAT +
Preference number: 6 (lower is better)
Translates to: RTPLTTSVLALA*QRTGVSLRTKY
Trigger: ATACTTAGTACGTAGGCTCACTCCTGTCCTTTGTCATGCTAAAGCCAAGACACTAGTTGTCAAAGGTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498524.5
CDS GCA 72 bp GTACTTGACTACGCTGATCATTCCACTAGAGGCTGCTaGATGAAGAGGTGTATAAGACTTTTTATCCTTGCA +
Preference number: 6 (lower is better)
Translates to: VLDYADHSTRGC*MKRCIRLFILA
Trigger: TGCAAGGATAAAAAGTCTTATACACCTCTTCATGCAGCAGCCTCTAGTGGAATGATCAGCGTAGTCAAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000460278.5
ENST00000476472.5
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS CCA 72 bp GAGTTCTTCCTTTTGAATCTGTGGCGTTCACAATGCTaGCACCTAATGTATCAATTAACATCTCAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: EFFLLNLWRSQC*HLMYQLTSQQH
Trigger: GTGCTGCTGAGATGTTAATTGATACATTAGGTGCCAGCATTGTGAACGCCACAGATTCAAAAGGAAGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000624145.3
ENST00000683139.1
CDS CAA 72 bp TTCCCATCTTTACTCTTCATATTGACATCGGCCCCATaGCCAACTAGAAGCTCTAAACACAATGCTCCATGT +
Preference number: 6 (lower is better)
Translates to: FPSLLFILTSAP*PTRSSKHNAPC
Trigger: ACATGGAGCATTGTGTTTAGAGCTTCTAGTTGGCAATGGGGCCGATGTCAATATGAAGAGTAAAGATGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS TCA 72 bp CCTCATGATGGGCAAAGCTTCAAAGCTGACTGTTTTTaGGGTGTTGGTATAACGGTTAATGGCATTGAATGT +
Preference number: 6 (lower is better)
Translates to: PHDGQSFKADCF*GVGITVNGIEC
Trigger: ACATTCAATGCCATTAACCGTTATACCAACACCTCAAAAACAGTCAGCTTTGAAGCTTTGCCCATCATGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000497037.5
ENST00000498713.1
ENST00000624145.3
ENST00000683139.1
CDS GCA 72 bp AAGGTACTTGACTACGCTGATCATTCCACTAGAGGCTaGTGCATGAAGAGGTGTATAAGACTTTTTATCCTT +
Preference number: 6 (lower is better)
Translates to: KVLDYADHSTRG*CMKRCIRLFIL
Trigger: AAGGATAAAAAGTCTTATACACCTCTTCATGCAGCAGCCTCTAGTGGAATGATCAGCGTAGTCAAGTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000460278.5
ENST00000476472.5
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS CAA 72 bp CTAGATACTGACAGTACTCACGTTTGCAAGGCTGCGTaGGTTGCATTGATGAGGTTTCTATCTGTTATCTTT +
Preference number: 6 (lower is better)
Translates to: LDTDSTHVCKAA*VALMRFLSVIF
Trigger: AAAGATAACAGATAGAAACCTCATCAATGCAACCAACGCAGCCTTGCAAACGTGAGTACTGTCAGTATCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479043.1
CDS CAA 72 bp ACATACACATACACACCTGGCTGTCAAAGAGCATTTTaGTCAACTTGTGAAGACCAAGAGGTACAAACTCGA +
Preference number: 6 (lower is better)
Translates to: TYTYTPGCQRAF*STCEDQEVQTR
Trigger: TCGAGTTTGTACCTCTTGGTCTTCACAAGTTGACAAAAATGCTCTTTGACAGCCAGGTGTGTATGTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498713.1
CDS CAA 90 bp AATAATGAACTGCGTTGTATCCTTGCTTATCACGGATCCCTGGATTaGCATCGTTTCTTAATAAGTATTCCAGGCACTTGCCATCTGTGT +
Preference number: 6 (lower is better)
Translates to: NNELRCILAYHGSLD*HRFLISIPGTCHLC
Trigger: ACACAGATGGCAAGTGCCTGGAATACTTATTAAGAAACGATGCAAATCCAGGGATCCGTGATAAGCAAGGATACAACGCAGTTCATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS TCA 72 bp CTGCAAGATCTAGGGGTGTTCTTCCACTACTATTTCTaGCATCAAGATCTAACAAAGACTGTACCAACACTT +
Preference number: 6 (lower is better)
Translates to: LQDLGVFFHYYF*HQDLTKTVPTL
Trigger: AAGTGTTGGTACAGTCTTTGTTAGATCTTGATGTCAGAAATAGTAGTGGAAGAACACCCCTAGATCTTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000462657.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS GCA 72 bp ACAAAGTTTATACTAGATACTGACAGTACTCACGTTTaGAAGGCTGCGTTGGTTGCATTGATGAGGTTTCTA +
Preference number: 6 (lower is better)
Translates to: TKFILDTDSTHV*KAALVALMRFL
Trigger: TAGAAACCTCATCAATGCAACCAACGCAGCCTTGCAAACGTGAGTACTGTCAGTATCTAGTATAAACTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479043.1
CDS CAA 90 bp GTCAGACCACAAGAGACAATACGACTCTTGGTACTAGAATACAGCTaGATTAATCCAGGTTTCCCATATAATAGAAGAAACACAGTTAGC +
Preference number: 6 (lower is better)
Translates to: VRPQETIRLLVLEYS*INPGFPYNRRNTVS
Trigger: GCTAACTGTGTTTCTTCTATTATATGGGAAACCTGGATTAATCAAGCTGTATTCTAGTACCAAGAGTCGTATTGTCTCTTGTGGTCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461696.1
ENST00000683139.1
CDS CAA 72 bp AGCACCACAGTCTATAAGTTCATTCACTACAACATCTaGTCCATTATAGCAGGCTACATGAAGAGGTGTATT +
Preference number: 6 (lower is better)
Translates to: STTVYKFIHYNI*SIIAGYMKRCI
Trigger: AATACACCTCTTCATGTAGCCTGCTATAATGGACAAGATGTTGTAGTGAATGAACTTATAGACTGTGGTGCT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399451.6
ENST00000412318.5
ENST00000451422.1
ENST00000492895.1
ENST00000497037.5
ENST00000498524.5
ENST00000624145.3
ENST00000683139.1
CDS CAA 90 bp AAGTTTATACTAGATACTGACAGTACTCACGTTTGCAAGGCTGCGTaGGTTGCATTGATGAGGTTTCTATCTGTTATCTTTTCCAGTATT +
Preference number: 6 (lower is better)
Translates to: KFILDTDSTHVCKAA*VALMRFLSVIFSSI
Trigger: AATACTGGAAAAGATAACAGATAGAAACCTCATCAATGCAACCAACGCAGCCTTGCAAACGTGAGTACTGTCAGTATCTAGTATAAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479043.1
CDS TCA 72 bp AAGACTGTACTCTGGTTTTCGAAATACGCCCTTCTGTaGTGCAACAATTATTTATCGAAACTTACTGTCCAT +
Preference number: 6 (lower is better)
Translates to: KTVLWFSKYALL*CNNYLSKLTVH
Trigger: ATGGACAGTAAGTTTCGATAAATAATTGTTGCATCACAGAAGGGCGTATTTCGAAAACCAGAGTACAGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498524.5
CDS CCA 72 bp ACACTAAATTCCAAGCTATGTGATAAAAGTCACAGTTaGAAGAGCACAAGTAGTTTTTCCTCCTCTTCTGTA +
Preference number: 6 (lower is better)
Translates to: TLNSKLCDKSHS*KSTSSFSSSSV
Trigger: TACAGAAGAGGAGGAAAAACTACTTGTGCTCTTCCAACTGTGACTTTTATCACATAGCTTGGAATTTAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461696.1
ENST00000498524.5
ENST00000683139.1
CDS TCA 72 bp ATCTATAACTTCAAAGTAGCTTTATGCTTCCCTACGTaGCCTTTTATGAGTCTACCTATAAAAGCGATGACT +
Preference number: 6 (lower is better)
Translates to: IYNFKVALCFPT*PFMSLPIKAMT
Trigger: AGTCATCGCTTTTATAGGTAGACTCATAAAAGGTCACGTAGGGAAGCATAAAGCTACTTTGAAGTTATAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498524.5
CDS TCA 72 bp CAAATTTTAAAAACCTCTAATTTCTCTACTAAAGCCTaGAGCTTGAACTTTGACAACACTGATGCTTGCACT +
Preference number: 6 (lower is better)
Translates to: QILKTSNFSTKA*SLNFDNTDACT
Trigger: AGTGCAAGCATCAGTGTTGTCAAAGTTCAAGCTTCAGGCTTTAGTAGAGAAATTAGAGGTTTTTAAAATTTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498524.5