RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD26 (Homo sapiens)

Ensembl gene IDs: ENSG00000107890

Ensembl transcript IDs: ENST00000376087.5, ENST00000436985.7, ENST00000445828.5, ENST00000466890.1, ENST00000490015.1, ENST00000674670.1, ENST00000674697.1, ENST00000675116.1, ENST00000675187.1, ENST00000675439.1, ENST00000675846.1, ENST00000675936.1, ENST00000676280.1, ENST00000676299.1, ENST00000676361.1, ENST00000676420.1

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGAGCAGAGAGATGACTTTGATTTCTGTCCTCTGTTCTGCACCTaGAAGTTGGTTCAGGCTATGCTACTGCCTCCTCAGTTAGAGCAC +
Preference number: 1 (lower is better)
Translates to: GEQRDDFDFCPLFCT*KLVQAMLLPPQLEH
Trigger: GTGCTCTAACTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCTCTGCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
3UTR TCA 90 bp ATGAGAGATGTTCCTACAGGTTCCCCCTTTTCCACTTCTTCCAGATaGAAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGA +
Preference number: 1 (lower is better)
Translates to: MRDVPTGSPFSTSSR*KAARETVVKSSGDG
Trigger: TCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTTTCATCTGGAAGAAGTGGAAAAGGGGGAACCTGTAGGAACATCTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR GCA 90 bp GTCTCAGGTGAGCAGAGAGATGACTTTGATTTCTGTCCTCTGTTCTaGACCTGGAAGTTGGTTCAGGCTATGCTACTGCCTCCTCAGTTA +
Preference number: 1 (lower is better)
Translates to: VSGEQRDDFDFCPLF*TWKLVQAMLLPPQL
Trigger: TAACTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCTCTGCTCACCTGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
3UTR GCA 90 bp TCTTGCAAATGGCCATCAGAGCACTGGACTGAAAACACTGGACTCTaGTGCGAAACAAGGTTCCCAAATCAAGTCATTTGCAACAACTGT +
Preference number: 1 (lower is better)
Translates to: SCKWPSEHWTENTGL*CETRFPNQVICNNC
Trigger: ACAGTTGTTGCAAATGACTTGATTTGGGAACCTTGTTTCGCAGCAGAGTCCAGTGTTTTCAGTCCAGTGCTCTGATGGCCATTTGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR TCA 90 bp GGAGCCACCGTGCCCGGCCTACCTCTGCATGTTTATCCTCCTTCCTaGAATAGATTCTTTAGACATTACTTTAGTCCCTTGGTAATAAAT +
Preference number: 1 (lower is better)
Translates to: GATVPGLPLHVYPPS*NRFFRHYFSPLVIN
Trigger: ATTTATTACCAAGGGACTAAAGTAATGTCTAAAGAATCTATTTCAGGAAGGAGGATAAACATGCAGAGGTAGGCCGGGCACGGTGGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR CCA 90 bp TGTTTGATTAATCTGATTGGCAGCTGTTACTGGTCATTCCCTATATaGTGTGATCATGAGAGATGTTCCTACAGGTTCCCCCTTTTCCAC +
Preference number: 1 (lower is better)
Translates to: CLINLIGSCYWSFPI*CDHERCSYRFPLFH
Trigger: GTGGAAAAGGGGGAACCTGTAGGAACATCTCTCATGATCACACCATATAGGGAATGACCAGTAACAGCTGCCAATCAGATTAATCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR TCA 90 bp ACTTTGATTGATGTTGTAGGAAGGCTTTCAACCACAACTTCATCTTaGCTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTT +
Preference number: 1 (lower is better)
Translates to: TLIDVVGRLSTTTSS*LSESLSSNKVLFPV
Trigger: AACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTTGAAAGCCTTCCTACAACATCAATCAAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
3UTR CCA 90 bp TCCAGACTGAAAGATCTAACAGATACAACAACTAAATACAAGCCATaGATTAGAATGGGATCCTTTTGCTATAAAGGACATTACAGAGAA +
Preference number: 1 (lower is better)
Translates to: SRLKDLTDTTTKYKP*IRMGSFCYKGHYRE
Trigger: TTCTCTGTAATGTCCTTTATAGCAAAAGGATCCCATTCTAATCCATGGCTTGTATTTAGTTGTTGTATCTGTTAGATCTTTCAGTCTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
3UTR-3UTR GCA 90 bp TGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTGGCATCGTGGCTCCCAGATTGCCCCACTaGACTCCAGTGTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: CPLHTVSKEELYRPGIVAPRLPH*TPVWVT
Trigger: TGTCACCCACACTGGAGTGCAGTGGGGCAATCTGGG...AGCCACGATGCCAGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR TCA 90 bp TGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTGGCATCGTGGCTCCAGGGAGACTGTTGTaGAATCATCAGGAGACGGAG +
Preference number: 2 (lower is better)
Translates to: CPLHTVSKEELYRPGIVAPGRLL*NHQETE
Trigger: CTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGG...AGCCACGATGCCAGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR GCA 90 bp GCCACTGTGCCCTGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTAGTAGACCACCCTGTTaGCTTCTGGAAGTTGGTTCA +
Preference number: 2 (lower is better)
Translates to: ATVPCPLHTVSKEELYRPSRPPC*LLEVGS
Trigger: TGAACCAACTTCCAGAAGGCAACAGGGTGGTCTACT...AGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCAGGGCACAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675439.1
3UTR-3UTR GCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGCTGTCTATGCTGAGCTaGTTTAGCGAGCACTCTGGT +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLLSMLS*FSEHSG
Trigger: ACCAGAGTGCTCGCTAAAGCAGCTCAGCATAGACAG...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR GCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGCGATCCTGTGCTTCTTaGAAATGGCCATCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLRSCAS*KWPSEH
Trigger: GTGCTCTGATGGCCATTTGCAAGAAGCACAGGATCG...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR CCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTGGCCATCAGAGCACTaGACTGAAAACACTGGACTC +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLWPSEH*TENTGL
Trigger: GAGTCCAGTGTTTTCAGTCCAGTGCTCTGATGGCCA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR GCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGGAAAACACTGGACTCTaGTGCGAAACAAGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLENTGL*CETRFP
Trigger: TGGGAACCTTGTTTCGCAGCAGAGTCCAGTGTTTTC...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR CCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTGTGCTTCTTGCAAATaGCCATCAGAGCACTGGACT +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLCASCK*PSEHWT
Trigger: AGTCCAGTGCTCTGATGGCCATTTGCAAGAAGCACA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR TCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTCTTCTCAGCACATCTaGCAGCTTCTGTATGTCGAT +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLSSQHI*QLLYVD
Trigger: ATCGACATACAGAAGCTGTCAGATGTGCTGAGAAGA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR GCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGAACACTGGACTCTGCTaGGAAACAAGGTTCCCAAAT +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLNTGLC*ETRFPN
Trigger: ATTTGGGAACCTTGTTTCGCAGCAGAGTCCAGTGTT...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR GCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTGTATGTCGATCCTGTaGTTCTTGCAAATGGCCATC +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLCMSIL*FLQMAI
Trigger: GATGGCCATTTGCAAGAAGCACAGGATCGACATACA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR TCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTCAAGCTTTTGCTTGTaGTCTTGCATCTTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLSSFCL*SCIFSA
Trigger: TGCTGAGAAGATGCAAGATCACAAGCAAAAGCTTGA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR CAA 90 bp CAGAGAGATGACTTTGATTTCTGTCCTCTGTTCTGCACCTGGAAGTaGGTTCAGGCTATGCTACTGCCTCCTCAGTTAGAGCACTTCTTT +
Preference number: 2 (lower is better)
Translates to: QRDDFDFCPLFCTWK*VQAMLLPPQLEHFF
Trigger: AAAGAAGTGCTCTAACTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
3UTR-3UTR TCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTATGACTTCTCAGGTTaGTCACTTCTTGTTCCAACT +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLYDFSG*SLLVPT
Trigger: AGTTGGAACAAGAAGTGATCAACCTGAGAAGTCATA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR TCA 90 bp AATCTGATTGGCAGCTGTTACTGGTCATTCCCTATATGGTGTGATCATGAGAGATCCACTTCTTCCAGATaGAAGGCTGCCAGGGAGACT +
Preference number: 2 (lower is better)
Translates to: NLIGSCYWSFPIWCDHERSTSSR*KAARET
Trigger: AGTCTCCCTGGCAGCCTTTCATCTGGAAGAAGTGGA...TCTCTCATGATCACACCATATAGGGAATGACCAGTAACAGCTGCCAATCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR TCA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTAAGGCAGAGGTTGCAGTaGGCCCAGATTGCCCCACTG +
Preference number: 2 (lower is better)
Translates to: ILIEINQGVVLQETCLELRQRLQ*AQIAPL
Trigger: CAGTGGGGCAATCTGGGCTCACTGCAACCTCTGCCT...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR GCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTGCAGTCTCCAGTTCTaGTGTAAGATCATCAATCTT +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLCSLQF*CKIINL
Trigger: AAGATTGATGATCTTACAGCAGAACTGGAGACTGCA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR TCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTTTAACAGGTTTTTCTaGAGCTCCTCAATTTTGTCC +
Preference number: 2 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLFNRFF*SSSILS
Trigger: GGACAAAATTGAGGAGCTTCAGAAAAACCTGTTAAA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR TCA 90 bp ATTCATAGAAGGTACGCTCTCTGGAATACTTCTAGGTTGAGAATTCTTCGCTCTGTGATCATAGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: IHRRYALWNTSRLRILRSVIIAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTTCAGTGAGCTATGATCAC...AGAGCGAAGAATTCTCAACCTAGAAGTATTCCAGAGAGCGTACCTTCTATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR GCA 90 bp ATTCATAGAAGGTACGCTCTCTGGAATACTTCTAGGTTGAGAATTCTTCGCTCTCTGTGCCCTGCCCTCTaGACACAGTTTCTAAAGAGG +
Preference number: 2 (lower is better)
Translates to: IHRRYALWNTSRLRILRSLCPAL*TQFLKR
Trigger: CCTCTTTAGAAACTGTGTGCAGAGGGCAGGGCACAG...AGAGCGAAGAATTCTCAACCTAGAAGTATTCCAGAGAGCGTACCTTCTATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR TCA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTATCCACTTCTTCCAGATaGAAGGCTGCCAGGGAGACT +
Preference number: 2 (lower is better)
Translates to: ILIEINQGVVLQETCLELSTSSR*KAARET
Trigger: AGTCTCCCTGGCAGCCTTTCATCTGGAAGAAGTGGA...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR GCA 90 bp CGTTATTGTTCTTTGTGGGTGATCAGTCTTTTCTCTCTCACTATTATTAGAATCGAGGTCTCTCTATGTTaGCCAGGCTGGCCTCAAGCA +
Preference number: 2 (lower is better)
Translates to: RYCSLWVISLFSLTIIRIEVSLC*PGWPQA
Trigger: TGCTTGAGGCCAGCCTGGGCAACATAGAGAGACCTC...GATTCTAATAATAGTGAGAGAGAAAAGACTGATCACCCACAAAGAACAATAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR GCA 90 bp GGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGGTGTTTGCCAGAAAGCCTaGTTAAGGAGTCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: GSTYFCGKFSEILSESQGVCQKA*LRSLQS
Trigger: GCTCTGAAGACTCCTTAAGCAGGCTTTCTGGCAAAC...ACCTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675187.1
ENST00000676420.1
3UTR-3UTR GCA 90 bp AAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGCATCAACACCCGGTTTaGCAGAAAGCCTGCTTAAGG +
Preference number: 2 (lower is better)
Translates to: KDQHTSVENSQRYSQNPKHQHPV*QKACLR
Trigger: CCTTAAGCAGGCTTTCTGGCAAACCGGGTGTTGATG...CTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675187.1
ENST00000676420.1
3UTR-3UTR GCA 90 bp GTGATTCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCCATCAACACCCGGTTTaGCAGAAAGCAGATCCCTCT +
Preference number: 2 (lower is better)
Translates to: VILYLPLVLILMRTSYHFHQHPV*QKADPS
Trigger: AGAGGGATCTGCTTTCTGGCAAACCGGGTGTTGATG...GAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676299.1
3UTR-3UTR GCA 90 bp GGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGGTAGTGAAGAGCAGTGTTaGCATGGACATCCGCAAGAT +
Preference number: 2 (lower is better)
Translates to: GSTYFCGKFSEILSESQGSEEQC*HGHPQD
Trigger: ATCTTGCGGATGTCCATGGCAACACTGCTCTTCACT...ACCTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676420.1
3UTR-3UTR CCA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTAGAGGTCGGAGTAAGCTaGGGATGTACCTGGAAGTTG +
Preference number: 2 (lower is better)
Translates to: ILIEINQGVVLQETCLELEVGVS*GCTWKL
Trigger: CAACTTCCAGGTACATCCCCAGCTTACTCCGACCTC...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674670.1
3UTR-3UTR TCA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGTCCAAACATGAACAATaGCCACAGTTCCTGCACAAC +
Preference number: 2 (lower is better)
Translates to: NANITSNRANQNCRVTGKSKHEQ*PQFLHN
Trigger: GTTGTGCAGGAACTGTGGTCATTGTTCATGTTTGGA...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
3UTR-3UTR GCA 90 bp AAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGTTTGCCAGAAAGCCTaGTTAAGGAGTCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: KGSTYFCGKFSEILSESQVCQKA*LRSLQS
Trigger: GCTCTGAAGACTCCTTAAGCAGGCTTTCTGGCAAAC...TTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675187.1
ENST00000676420.1
3UTR-3UTR GCA 90 bp CTGCAGCCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTTCCTGTTCTCACAGTaGCATATGTTGCTTCTAAAT +
Preference number: 2 (lower is better)
Translates to: LQPQLKDQHTSVENSQRYFLFSQ*HMLLLN
Trigger: ATTTAGAAGCAACATATGGCACTGTGAGAACAGGAA...GTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGGCTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
3UTR-3UTR TCA 90 bp GACTTGAATTTCCTATTTATCCTGTTTTATAGGGCCTCTTGTATCACTAGATTCACAGGAGACTTGTCTTaGGTTATGCCTCCTCAGCTA +
Preference number: 2 (lower is better)
Translates to: DLNFLFILFYRASCITRFTGDLS*VMPPQL
Trigger: TAGCTGAGGAGGCATAACTCAAGACAAGTCTCCTGT...GAATCTAGTGATACAAGAGGCCCTATAAAACAGGATAAATAGGAAATTCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR TCA 90 bp CTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCACCACAACTTCATCTTaGCTATCGGAATCTCTATCC +
Preference number: 2 (lower is better)
Translates to: LKDQHTSVENSQRYSQNPTTTSS*LSESLS
Trigger: GGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGT...GGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
3UTR-3UTR TCA 90 bp CAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATTGGAAGAAGGTCAGGTaGTTGATAGGTAGGATGAGA +
Preference number: 2 (lower is better)
Translates to: QLKDQHTSVENSQRYSQNWKKVR*LIGRMR
Trigger: TCTCATCCTACCTATCAATCACCTGACCTTCTTCCA...ATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
3UTR-3UTR GCA 90 bp CCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGTTCCTGTTCTCACAGTaGCATATGTTGCTTCTAAAT +
Preference number: 2 (lower is better)
Translates to: PQLKDQHTSVENSQRYSQFLFSQ*HMLLLN
Trigger: ATTTAGAAGCAACATATGGCACTGTGAGAACAGGAA...CTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
3UTR-3UTR CCA 90 bp GAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTGTAACTAAATACAAGCCATaGATTAGAATGGGATCCTTT +
Preference number: 2 (lower is better)
Translates to: EGSMGSRDMYIVSNYLPVTKYKP*IRMGSF
Trigger: AAAGGATCCCATTCTAATCCATGGCTTGTATTTAGT...TACAGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
3UTR-3UTR CCA 90 bp ATTCATAGAAGGTACGCTCTCTGGAATACTTCTAGGTTGAGAATTCTTCGCTCTATCACTCTTACCTCCTaGAAAATTGCATCCTATTCC +
Preference number: 2 (lower is better)
Translates to: IHRRYALWNTSRLRILRSITLTS*KIASYS
Trigger: GGAATAGGATGCAATTTTCCAGGAGGTAAGAGTGAT...AGAGCGAAGAATTCTCAACCTAGAAGTATTCCAGAGAGCGTACCTTCTATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR CCA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTACAGACTGAAGTATGGTaGTGTGATCATAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: ILIEINQGVVLQETCLELQTEVW*CDHSSL
Trigger: CAGTGAGCTATGATCACACCACCATACTTCAGTCTG...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR TCA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGACCATGAAACCCAATTaGGGGACATTCTTATATTAC +
Preference number: 2 (lower is better)
Translates to: NANITSNRANQNCRVTGKTMKPN*GTFLYY
Trigger: GTAATATAAGAATGTCCCTCAATTGGGTTTCATGGT...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
3UTR-3UTR TCA 90 bp ATTCATAGAAGGTACGCTCTCTGGAATACTTCTAGGTTGAGAATTCTTCGCTCTTCACTAGATTCTAATTaGAATAAACCAGGGGGTTGT +
Preference number: 2 (lower is better)
Translates to: IHRRYALWNTSRLRILRSSLDSN*NKPGGC
Trigger: ACAACCCCCTGGTTTATTTCAATTAGAATCTAGTGA...AGAGCGAAGAATTCTCAACCTAGAAGTATTCCAGAGAGCGTACCTTCTATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR TCA 90 bp GTGATTCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCCAGCTTTGTTGCTACTaGTATGTCCTCATTATAGAC +
Preference number: 2 (lower is better)
Translates to: VILYLPLVLILMRTSYHFQLCCY*YVLIID
Trigger: GTCTATAATGAGGACATATCAGTAGCAACAAAGCTG...GAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGAATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676420.1
3UTR-3UTR GCA 90 bp CATGAAGGTCAAGGAAAGACTGAGGAACTGTTCCAGACTGAAAGATCTAACAGAAGAATGGGATCCTTTTaGTATAAAGGACATTACAGA +
Preference number: 2 (lower is better)
Translates to: HEGQGKTEELFQTERSNRRMGSF*YKGHYR
Trigger: TCTGTAATGTCCTTTATAGCAAAAGGATCCCATTCT...TCTGTTAGATCTTTCAGTCTGGAACAGTTCCTCAGTCTTTCCTTGACCTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
3UTR-3UTR GCA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTATACCTCCTGGAAAATTaGATCCTATTCCCCCAATTG +
Preference number: 2 (lower is better)
Translates to: ILIEINQGVVLQETCLELYLLEN*ILFPQL
Trigger: CAATTGGGGGAATAGGATGCAATTTTCCAGGAGGTA...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR GCA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGAGAATGGGATCCTTTTaGTATAAAGGACATTACAGA +
Preference number: 2 (lower is better)
Translates to: NANITSNRANQNCRVTGKRMGSF*YKGHYR
Trigger: TCTGTAATGTCCTTTATAGCAAAAGGATCCCATTCT...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
3UTR-3UTR GCA 90 bp GACTTGAATTTCCTATTTATCCTGTTTTATAGGGCCTCTTGTATCACTAGATTCTACCTCCTGGAAAATTaGATCCTATTCCCCCAATTG +
Preference number: 2 (lower is better)
Translates to: DLNFLFILFYRASCITRFYLLEN*ILFPQL
Trigger: CAATTGGGGGAATAGGATGCAATTTTCCAGGAGGTA...GAATCTAGTGATACAAGAGGCCCTATAAAACAGGATAAATAGGAAATTCAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR TCA 90 bp CAGCAATTTACTCTCAAATTGTTCGGAGGAGAAAGTCTTTGTACTAAAACTTCGTCCTGCACAACAAAATaGTGTCTAAGTCCAATTAGA +
Preference number: 2 (lower is better)
Translates to: QQFTLKLFGGESLCTKTSSCTTK*CLSPIR
Trigger: TCTAATTGGACTTAGACATCATTTTGTTGTGCAGGA...CGAAGTTTTAGTACAAAGACTTTCTCCTCCGAACAATTTGAGAGTAAATTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
3UTR-3UTR GCA 90 bp GTGATTCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCAAATTAGTTGGTGACTaGTTTCCAACTTATCTACTG +
Preference number: 2 (lower is better)
Translates to: VILYLPLVLILMRTSYHFKLVGD*FPTYLL
Trigger: CAGTAGATAAGTTGGAAAGCAGTCACCAACTAATTT...GAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGAATCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675187.1
ENST00000676420.1
3UTR-3UTR TCA 90 bp AAAATAACATTACAGAGGAGAAATTCAGCAGATACCACTGTTAGTGATCAATGCTCCTGCACAACAAAATaGTGTCTAAGTCCAATTAGA +
Preference number: 2 (lower is better)
Translates to: KITLQRRNSADTTVSDQCSCTTK*CLSPIR
Trigger: TCTAATTGGACTTAGACATCATTTTGTTGTGCAGGA...GCATTGATCACTAACAGTGGTATCTGCTGAATTTCTCCTCTGTAATGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
3UTR-3UTR TCA 90 bp AAAATAACATTACAGAGGAGAAATTCAGCAGATACCACTGTTAGTGATCAATGCACCATGAAACCCAATTaGGGGACATTCTTATATTAC +
Preference number: 2 (lower is better)
Translates to: KITLQRRNSADTTVSDQCTMKPN*GTFLYY
Trigger: GTAATATAAGAATGTCCCTCAATTGGGTTTCATGGT...GCATTGATCACTAACAGTGGTATCTGCTGAATTTCTCCTCTGTAATGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
3UTR-3UTR GCA 90 bp AAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAAAATTAGTTGGTGACTaGTTTCCAACTTATCTACTG +
Preference number: 2 (lower is better)
Translates to: KGSTYFCGKFSEILSESQKLVGD*FPTYLL
Trigger: CAGTAGATAAGTTGGAAAGCAGTCACCAACTAATTT...TTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675187.1
ENST00000676420.1
3UTR-3UTR CCA 90 bp AAAATAACATTACAGAGGAGAAATTCAGCAGATACCACTGTTAGTGATCAATGCAGCCATGGATTAGAATaGGATCCTTTTGCTATAAAG +
Preference number: 2 (lower is better)
Translates to: KITLQRRNSADTTVSDQCSHGLE*DPFAIK
Trigger: CTTTATAGCAAAAGGATCCCATTCTAATCCATGGCT...GCATTGATCACTAACAGTGGTATCTGCTGAATTTCTCCTCTGTAATGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
3UTR GCA 72 bp AGGTTCCCCCTTTTCCACTTCTTCCAGATGAAAGGCTaGCAGGGAGACTGTTGTGAAATCATCAGGAGACGG +
Preference number: 3 (lower is better)
Translates to: RFPLFHFFQMKG*QGDCCEIIRRR
Trigger: CCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTTTCATCTGGAAGAAGTGGAAAAGGGGGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR CAA 90 bp TGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTGGCATCGTGGCTTTACCTCCTGGAAAATaGCATCCTATTCCCCCAATT +
Preference number: 3 (lower is better)
Translates to: CPLHTVSKEELYRPGIVALPPGK*HPIPPI
Trigger: AATTGGGGGAATAGGATGCAATTTTCCAGGAGGTAA...AGCCACGATGCCAGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR TCA 72 bp GGAGTTGTAGAAGTAGACCACCCTGTTGCCTTCTGTTaGGTGAGTAGCAGACAAGGAGAGGAAGATGGTAGG +
Preference number: 3 (lower is better)
Translates to: GVVEVDHPVAFC*VSSRQGEEDGR
Trigger: CCTACCATCTTCCTCTCCTTGTCTGCTACTCACTCAACAGAAGGCAACAGGGTGGTCTACTTCTACAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674670.1
3UTR GCA 72 bp TGGCCATCAGAGCACTGGACTGAAAACACTGGACTCTaGTGCGAAACAAGGTTCCCAAATCAAGTCATTTGC +
Preference number: 3 (lower is better)
Translates to: WPSEHWTENTGL*CETRFPNQVIC
Trigger: GCAAATGACTTGATTTGGGAACCTTGTTTCGCAGCAGAGTCCAGTGTTTTCAGTCCAGTGCTCTGATGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR CCA 72 bp AGAGATGACTTTGATTTCTGTCCTCTGTTCTGCACCTaGAAGTTGGTTCAGGCTATGCTACTGCCTCCTCAG +
Preference number: 3 (lower is better)
Translates to: RDDFDFCPLFCT*KLVQAMLLPPQ
Trigger: CTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
3UTR-3UTR CAA 90 bp TCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAGGTTTTGGAAGATCATCAACACCCGGTTaGCCAGAAAGCAGATCCCTC +
Preference number: 3 (lower is better)
Translates to: SSFIRPGFANDLWEGFGRSSTPG*PESRSL
Trigger: GAGGGATCTGCTTTCTGGCAAACCGGGTGTTGATGA...TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676299.1
3UTR-3UTR CAA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGCTCCTCTTGAAGAATTaGGTTCTTTGTATCCAGATG +
Preference number: 3 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLLLLKN*VLCIQM
Trigger: CATCTGGATACAAAGAACCAAATTCTTCAAGAGGAG...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR-3UTR CAA 90 bp CTGCAGCCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACCTGTTCTCGAGAAAGTaGCCTCTGAGCGTCATTTCG +
Preference number: 3 (lower is better)
Translates to: LQPQLKDQHTSVENSQRYLFSRK*PLSVIS
Trigger: CGAAATGACGCTCAGAGGCAACTTTCTCGAGAACAG...GTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676420.1
3UTR-3UTR CAA 90 bp TCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAGGTTTTGGAAGAGCTGTCCTGTTTTCGTaGTCACAGACATTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: SSFIRPGFANDLWEGFGRAVLFS*SQTLSW
Trigger: CCAGCTCAATGTCTGTGACAACGAAAACAGGACAGC...TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676420.1
3UTR CCA 72 bp GGCTATGCTACTGCCTCCTCAGTTAGAGCACTTCTTTaGGCAACCATTACTCTAGACTTCTCAGTTGCACAT +
Preference number: 3 (lower is better)
Translates to: GYATASSVRALL*ATITLDFSVAH
Trigger: ATGTGCAACTGAGAAGTCTAGAGTAATGGTTGCCCAAAGAAGTGCTCTAACTGAGGAGGCAGTAGCATAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
3UTR TCA 72 bp GCAAATCAAAACTGTAGGGTCACAGGTAAGATGCAATaGGAAGATCACTGGGTCACTTCTGTGATACTCCTG +
Preference number: 3 (lower is better)
Translates to: ANQNCRVTGKMQ*EDHWVTSVILL
Trigger: CAGGAGTATCACAGAAGTGACCCAGTGATCTTCTCATTGCATCTTACCTGTGACCCTACAGTTTTGATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
3UTR-3UTR CAA 90 bp CTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCATCAACACCCGGTTaGCCAGAAAGCCTGCTTAAG +
Preference number: 3 (lower is better)
Translates to: LHLDYRNLYPQTKFYFLFSSTPG*PESLLK
Trigger: CTTAAGCAGGCTTTCTGGCAAACCGGGTGTTGATGA...GAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675187.1
ENST00000676420.1
3UTR-3UTR CAA 90 bp AAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAATCATCAACACCCGGTTaGCCAGAAAGCCTGCTTAAG +
Preference number: 3 (lower is better)
Translates to: KGSTYFCGKFSEILSESQSSTPG*PESLLK
Trigger: CTTAAGCAGGCTTTCTGGCAAACCGGGTGTTGATGA...TTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675187.1
ENST00000676420.1
3UTR-3UTR CAA 90 bp TCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAGGTTTTGGAAGAAACCACAACTTCATCTaGACTATCGGAATCTCTATC +
Preference number: 3 (lower is better)
Translates to: SSFIRPGFANDLWEGFGRNHNFI*TIGISI
Trigger: GATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT...TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
3UTR-3UTR CAA 90 bp AAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGGGTTTGCTAACGACTaGTGGGAAGGTTTTGGAAGA +
Preference number: 3 (lower is better)
Translates to: KGSTYFCGKFSEILSESQGFAND*WEGFGR
Trigger: TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCC...TTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
3UTR-3UTR CAA 90 bp GACTTGAATTTCCTATTTATCCTGTTTTATAGGGCCTCTTGTATCACTAGATTCTACAGGAGACTTGTCTaGAGTTATGCCTCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: DLNFLFILFYRASCITRFYRRLV*SYASSA
Trigger: AGCTGAGGAGGCATAACTCAAGACAAGTCTCCTGTA...GAATCTAGTGATACAAGAGGCCCTATAAAACAGGATAAATAGGAAATTCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR CAA 90 bp CAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATACTTGTGGGAAGGTTTaGGAAGAAGGTCAGGTGATT +
Preference number: 3 (lower is better)
Translates to: QLKDQHTSVENSQRYSQNTCGKV*EEGQVI
Trigger: AATCACCTGACCTTCTTCCAAAACCTTCCCACAAGT...ATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
3UTR-3UTR CAA 90 bp GGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGGTTTCTTAGTATCAAAATaGAGGTCTTCGTCATCTGAG +
Preference number: 3 (lower is better)
Translates to: GSTYFCGKFSEILSESQGFLVSK*RSSSSE
Trigger: CTCAGATGACGAAGACCTCAATTTTGATACTAAGAA...ACCTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675187.1
ENST00000676299.1
ENST00000676420.1
3UTR-3UTR CAA 90 bp AAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGAACCACAACTTCATCTaGACTATCGGAATCTCTATC +
Preference number: 3 (lower is better)
Translates to: KDQHTSVENSQRYSQNPKNHNFI*TIGISI
Trigger: GATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT...CTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
3UTR TCA 72 bp TGTTTTATAGGGCCTCTTGTATCACTAGATTCTAATTaGAATAAACCAGGGGGTTGTGTTACAGGAGACTTG +
Preference number: 3 (lower is better)
Translates to: CFIGPLVSLDSN*NKPGGCVTGDL
Trigger: CAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAATCTAGTGATACAAGAGGCCCTATAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR TCA 72 bp GATGTTGTAGGAAGGCTTTCAACCACAACTTCATCTTaGCTATCGGAATCTCTATCCTCAAACAAAGTTCTA +
Preference number: 3 (lower is better)
Translates to: DVVGRLSTTTSS*LSESLSSNKVL
Trigger: TAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTTGAAAGCCTTCCTACAACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
3UTR CCA 72 bp CTTTATTTTATCTGCATTCATAGAAGGTACGCTCTCTaGAATACTTCTAGGTTGAGAATTCTTCGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: LYFICIHRRYAL*NTSRLRILRSQ
Trigger: CTGAGAGCGAAGAATTCTCAACCTAGAAGTATTCCAGAGAGCGTACCTTCTATGAATGCAGATAAAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR CAA 90 bp GTGATTCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCTTCTTAGTATCAAAATaGAGGTCTTCGTCATCTGAG +
Preference number: 3 (lower is better)
Translates to: VILYLPLVLILMRTSYHFFLVSK*RSSSSE
Trigger: CTCAGATGACGAAGACCTCAATTTTGATACTAAGAA...GAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675187.1
ENST00000676299.1
ENST00000676420.1
3UTR-3UTR CAA 90 bp CAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATAACCACAACTTCATCTaGACTATCGGAATCTCTATC +
Preference number: 3 (lower is better)
Translates to: QLKDQHTSVENSQRYSQNNHNFI*TIGISI
Trigger: GATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT...ATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
3UTR GCA 72 bp TTATTGTTGCTTTATCACTCTTACCTCCTGGAAAATTaGATCCTATTCCCCCAATTGCAACCTCATCTTTTT +
Preference number: 3 (lower is better)
Translates to: LLLLYHSYLLEN*ILFPQLQPHLF
Trigger: AAAAAGATGAGGTTGCAATTGGGGGAATAGGATGCAATTTTCCAGGAGGTAAGAGTGATAAAGCAACAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR-3UTR CAA 90 bp AAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAACACCATCATGTATGTTaGCTGATACTTCCATTTCAT +
Preference number: 3 (lower is better)
Translates to: KGSTYFCGKFSEILSESQHHHVC*LILPFH
Trigger: ATGAAATGGAAGTATCAGCAAACATACATGATGGTG...TTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676420.1
3UTR-3UTR CAA 90 bp TCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCTATTATTCTTAGTATCAAAATaGAGGTCTTCGTCATCTGAG +
Preference number: 3 (lower is better)
Translates to: SISSSCPNPNADIISLLLFLVSK*RSSSSE
Trigger: CTCAGATGACGAAGACCTCAATTTTGATACTAAGAA...TAATAGAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675187.1
ENST00000676299.1
ENST00000676420.1
CDS-3UTR TCA 90 bp AGAGCATGCAGGCAGAGGAAACAGATCTGGTCCAGGAAGTTCAGAGAGGTCGGAAGGCAGAGGTTGCAGTaGGCCCAGATTGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: RACRQRKQIWSRKFREVGRQRLQ*AQIAPL
Trigger: CAGTGGGGCAATCTGGGCTCACTGCAACCTCTGCCT...TCCGACCTCTCTGAACTTCCTGGACCAGATCTGTTTCCTCTGCCTGCATGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674670.1
CDS-3UTR GCA 90 bp TGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTGGCATCGTGGCTGCAGTGAGCCCAGATTaGCCCACTGCACTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: CPLHTVSKEELYRPGIVAAVSPD*PTALQC
Trigger: ACACTGGAGTGCAGTGGGGCAATCTGGGCTCACTGC...AGCCACGATGCCAGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTAAGGCGGGAGCCACCGTaGCCGGCCTACCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: KAARETVVKSSGDGVVEVRREPP*PAYLCM
Trigger: CATGCAGAGGTAGGCCGGGCACGGTGGCTCCCGCCT...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp GCCACTGTGCCCTGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTCTATGTTGCCCAGGCTaGCCTCAAGCAGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: ATVPCPLHTVSKEELYRPLCCPG*PQAVLS
Trigger: TGAGAGGACTGCTTGAGGCCAGCCTGGGCAACATAG...AGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCAGGGCACAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp TGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTGGCATCGTGGCTGAGGTCTCTCTATGTTaGCCAGGCTGGCCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: CPLHTVSKEELYRPGIVAEVSLC*PGWPQA
Trigger: TGCTTGAGGCCAGCCTGGGCAACATAGAGAGACCTC...AGCCACGATGCCAGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp GCCACTGTGCCCTGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTCCTGTTGCCTTCTGTTaGGTGAGTAGCAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: ATVPCPLHTVSKEELYRPPVAFC*VSSRQG
Trigger: TCCTTGTCTGCTACTCACTCAACAGAAGGCAACAGG...AGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCAGGGCACAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674670.1
CDS-3UTR TCA 90 bp TGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTGGCATCGTGGCTTCCACTTCTTCCAGATaGAAGGCTGCCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: CPLHTVSKEELYRPGIVASTSSR*KAARET
Trigger: AGTCTCCCTGGCAGCCTTTCATCTGGAAGAAGTGGA...AGCCACGATGCCAGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp AGAGCATGCAGGCAGAGGAAACAGATCTGGTCCAGGAAGTTCAGAGAGGTCGGAAGGTGGCTCCATGACTaGCCTGGTAGTGAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: RACRQRKQIWSRKFREVGRWLHD*PGSESG
Trigger: ACCACTCTCACTACCAGGCCAGTCATGGAGCCACCT...TCCGACCTCTCTGAACTTCCTGGACCAGATCTGTTTCCTCTGCCTGCATGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674670.1
CDS-3UTR TCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGGGTGGGAAAGCGGTATaGATCTACGGATCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLGGKAV*IYGSQL
Trigger: GAGCTGGGATCCGTAGATTCATACCGCTTTCCCACC...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR TCA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTAAGGCAGAGGTTGCAGTaGGCCCAGATTGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: KAARETVVKSSGDGVVEVRQRLQ*AQIAPL
Trigger: CAGTGGGGCAATCTGGGCTCACTGCAACCTCTGCCT...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp GCCACTGTGCCCTGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTACTCCTGCTGCATCTTaGTCAAGTAGTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: ATVPCPLHTVSKEELYRPTPAAS*SSSSPC
Trigger: GCATGGAGAACTACTTGAGCAAGATGCAGCAGGAGT...AGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCAGGGCACAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGAGGTGGCTCCATGACTaGCCTGGTAGTGAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLRWLHD*PGSESG
Trigger: ACCACTCTCACTACCAGGCCAGTCATGGAGCCACCT...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR TCA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTAGATCTTCTGACCTCCTaGTCTGCCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KAARETVVKSSGDGVVEVDLLTS*SACLGL
Trigger: GAGGCCAAGGCAGGCAGATCAGGAGGTCAGAAGATC...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTACCCAGATTGCCCCACTaGACTCCAGTGTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: KAARETVVKSSGDGVVEVPRLPH*TPVWVT
Trigger: TGTCACCCACACTGGAGTGCAGTGGGGCAATCTGGG...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp TGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTGGCATCGTGGCTAGTAGACCACCCTGTTaGCTTCTGGAAGTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: CPLHTVSKEELYRPGIVASRPPC*LLEVGS
Trigger: TGAACCAACTTCCAGAAGGCAACAGGGTGGTCTACT...AGCCACGATGCCAGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675439.1
CDS-3UTR CCA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTCAAGTCAGCCCCGGCTaGCCGCAGCCTCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPQVSPG*PQPPKG
Trigger: TCCTTTGGGAGGCTGCGGCCAGCCGGGGCTGACTTG...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp CTGCAGCCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACCTGGTCTCGGACTCCTaGCCTCAAGTGATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LQPQLKDQHTSVENSQRYLVSDS*PQVICP
Trigger: CGGGCAGATCACTTGAGGTCAGGAGTCCGAGACCAG...GTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR TCA 90 bp GGCTTTGTTGGTTCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAATGGAGTGCAGTGACGTaGTCTCAGCTCACTGCCACC +
Preference number: 4 (lower is better)
Translates to: GFVGSSFIRPGFANDLWEWSAVT*SQLTAT
Trigger: GGTGGCAGTGAGCTGAGATCACGTCACTGCACTCCA...TTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGAACCAACAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR CCA 90 bp CAGAGGGATGACTTTGAGTTCTGTCCTTTGTCCTGCACCAGTCTATCTCAGCATAGGTGGCTCCATGACTaGCCTGGTAGTGAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: QRDDFEFCPLSCTSLSQHRWLHD*PGSESG
Trigger: ACCACTCTCACTACCAGGCCAGTCATGGAGCCACCT...ATGCTGAGATAGACTGGTGCAGGACAAAGGACAGAACTCAAAGTCATCCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS-3UTR CCA 90 bp GTGAGCAGAGAGATGACTTTGATTTCTGTCCTCTGTTCTGCACCTGGAAGTTGGAGGTGGCTCCATGACTaGCCTGGTAGTGAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: VSREMTLISVLCSAPGSWRWLHD*PGSESG
Trigger: ACCACTCTCACTACCAGGCCAGTCATGGAGCCACCT...CCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCTCTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR CCA 90 bp TGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTGGCATCGTGGCTCAGACTGAAGTATGGTaGTGTGATCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CPLHTVSKEELYRPGIVAQTEVW*CDHSSL
Trigger: CAGTGAGCTATGATCACACCACCATACTTCAGTCTG...AGCCACGATGCCAGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGAGGGCATCTCTCGTGTaGTGGAACTCAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLRASLV*WNSISR
Trigger: CCTAGAAATTGAGTTCCATCACACGAGAGATGCCCT...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR TCA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTAGTGATCATAGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KAARETVVKSSGDGVVEVVIIAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTTCAGTGAGCTATGATCAC...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTAATGGTCTTGATCTTCTaGCCTCCTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KAARETVVKSSGDGVVEVMVLIF*PPDLPA
Trigger: GGCAGGCAGATCAGGAGGTCAGAAGATCAAGACCAT...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGACTCCTGCTGCATCTTaGTCAAGTAGTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLTPAAS*SSSSPC
Trigger: GCATGGAGAACTACTTGAGCAAGATGCAGCAGGAGT...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR GCA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTACTGTGCCCTGCCCTCTaGACACAGTTTCTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KAARETVVKSSGDGVVEVLCPAL*TQFLKR
Trigger: CCTCTTTAGAAACTGTGTGCAGAGGGCAGGGCACAG...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTATGCCCGGCCTACCTCTaGATGTTTATCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KAARETVVKSSGDGVVEVCPAYL*MFILLP
Trigger: AGGAAGGAGGATAAACATGCAGAGGTAGGCCGGGCA...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGCTGGAGCTCTTTGGGTaGGAAAGCGGTATGAATCTA +
Preference number: 4 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLLELFG*ESGMNL
Trigger: TAGATTCATACCGCTTTCCCACCCAAAGAGCTCCAG...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR CCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGAAAGCTGGAGCTCTTTaGGTGGGAAAGCGGTATGAA +
Preference number: 4 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLKAGAL*VGKRYE
Trigger: TTCATACCGCTTTCCCACCCAAAGAGCTCCAGCTTT...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR TCA 90 bp TCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAGGTTTTGGAAGATTGCCTTCCCAACAGTaGGGTGGATGGGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SSFIRPGFANDLWEGFGRLPSQQ*GGWEEW
Trigger: CCACTCTTCCCATCCACCTCACTGTTGGGAAGGCAA...TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR TCA 90 bp GCCACTGTGCCCTGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTATTAGGGGAATTGTTTaGCTCTTTAACCAGAATGAC +
Preference number: 4 (lower is better)
Translates to: ATVPCPLHTVSKEELYRPIRGIV*LFNQND
Trigger: GTCATTCTGGTTAAAGAGTCAAACAATTCCCCTAAT...AGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCAGGGCACAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp CGTTATTGTTCTTTGTGGGTGATCAGTCTTTTCTCTCTCACTATTATTAGAATCAGGCGGGAGCCACCGTaGCCGGCCTACCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: RYCSLWVISLFSLTIIRIRREPP*PAYLCM
Trigger: CATGCAGAGGTAGGCCGGGCACGGTGGCTCCCGCCT...GATTCTAATAATAGTGAGAGAGAAAAGACTGATCACCCACAAAGAACAATAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp AAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAACAAGTCAGCCCCGGCTaGCCGCAGCCTCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: KGSTYFCGKFSEILSESQQVSPG*PQPPKG
Trigger: TCCTTTGGGAGGCTGCGGCCAGCCGGGGCTGACTTG...TTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676420.1
3UTR CAA 72 bp TCAGGTCAGCAGAGGGATGACTTTGAGTTCTGTCCTTaGTCCTGCACCAGTCTATCTCAGCATTATCCAGTG +
Preference number: 4 (lower is better)
Translates to: SGQQRDDFEFCP*SCTSLSQHYPV
Trigger: CACTGGATAATGCTGAGATAGACTGGTGCAGGACAAAGGACAGAACTCAAAGTCATCCCTCTGCTGACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS-3UTR TCA 90 bp TGTCCTCTGTTCTGCACCTGGAAGTTGGTTCAGGCTATGCTACTGCCTCCTCAGTATGACTTCTCAGGTTaGTCACTTCTTGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: CPLFCTWKLVQAMLLPPQYDFSG*SLLVPT
Trigger: AGTTGGAACAAGAAGTGATCAACCTGAGAAGTCATA...CTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGAACAGAGGACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR TCA 90 bp TGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTGGCATCGTGGCTGCAATTATCCTAAAATaGTACCCTGAATACCTGAGT +
Preference number: 4 (lower is better)
Translates to: CPLHTVSKEELYRPGIVAAIILK*YPEYLS
Trigger: ACTCAGGTATTCAGGGTATCATTTTAGGATAATTGC...AGCCACGATGCCAGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp ATTCATCTACAGCAGATGAAATGTGCCATAGATGGTCCAGTACCTCCATCCTTGCAGCTTTGTGGATCTTaGCGAGATCTCGGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: IHLQQMKCAIDGPVPPSLQLCGS*RDLGLG
Trigger: TCCGAGACCGAGATCTCGGCAAGATCCACAAAGCTG...CAAGGATGGAGGTACTGGACCATCTATGGCACATTTCATCTGCTGTAGATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR GCA 90 bp GGCTTTGTTGGTTCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAACATCAACACCCGGTTTaGCAGAAAGCCTGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: GFVGSSFIRPGFANDLWEHQHPV*QKACLR
Trigger: CCTTAAGCAGGCTTTCTGGCAAACCGGGTGTTGATG...TTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGAACCAACAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675187.1
ENST00000676420.1
CDS-3UTR GCA 90 bp ATTCATAGAAGGTACGCTCTCTGGAATACTTCTAGGTTGAGAATTCTTCGCTCTCTTGGCCTCCCAAAGTaGTGCGATTACAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: IHRRYALWNTSRLRILRSLGLPK*CDYRRE
Trigger: CTCCCGCCTGTAATCGCAGCACTTTGGGAGGCCAAG...AGAGCGAAGAATTCTCAACCTAGAAGTATTCCAGAGAGCGTACCTTCTATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp AATCTGATTGGCAGCTGTTACTGGTCATTCCCTATATGGTGTGATCATGAGAGAAGGTGGCTCCATGACTaGCCTGGTAGTGAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: NLIGSCYWSFPIWCDHERRWLHD*PGSESG
Trigger: ACCACTCTCACTACCAGGCCAGTCATGGAGCCACCT...TCTCTCATGATCACACCATATAGGGAATGACCAGTAACAGCTGCCAATCAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp AGAGATGACTTTGATTTCTGTCCTCTGTTCTGCACCTGGAAGTTGGTTCAGGCTTCTGCACCTGGAAGTTaGTTCAGGCTATGCTACTGC +
Preference number: 4 (lower is better)
Translates to: RDDFDFCPLFCTWKLVQASAPGS*FRLCYC
Trigger: GCAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGA...AGCCTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR CCA 90 bp AGAGAGATGACTTTGATTTCTGTCCTCTGTTCTGCACCTGGAAGTTGGTTCAGGCCTCTGTTCTGCACCTaGAAGTTGGTTCAGGCTATG +
Preference number: 4 (lower is better)
Translates to: REMTLISVLCSAPGSWFRPLFCT*KLVQAM
Trigger: CATAGCCTGAACCAACTTCCAGGTGCAGAACAGAGG...CCTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR CCA 90 bp AATCTGATTGGCAGCTGTTACTGGTCATTCCCTATATGGTGTGATCATGAGAGACTATGTTGCCCAGGCTaGCCTCAAGCAGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: NLIGSCYWSFPIWCDHERLCCPG*PQAVLS
Trigger: TGAGAGGACTGCTTGAGGCCAGCCTGGGCAACATAG...TCTCTCATGATCACACCATATAGGGAATGACCAGTAACAGCTGCCAATCAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp CATCTACAGCAGATGAAATGTGCCATAGATGGTCCAGTACCTCCATCCTTGCCTTGGAAGAAGGTCAGGTaGTTGATAGGTAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: HLQQMKCAIDGPVPPSLPWKKVR*LIGRMR
Trigger: TCTCATCCTACCTATCAATCACCTGACCTTCTTCCA...AGGCAAGGATGGAGGTACTGGACCATCTATGGCACATTTCATCTGCTGTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR TCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGCAATCTAGAATGGTATaGTTCAACTTCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLQSRMV*FNFCFQ
Trigger: CTGGAAGCAGAAGTTGAATCATACCATTCTAGATTG...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR TCA 90 bp GGTGAGCAGAGAGATGACTTTGATTTCTGTCCTCTGTTCTGCACCTGGAAGTTGTCTTCTCAGCACATCTaGCAGCTTCTGTATGTCGAT +
Preference number: 4 (lower is better)
Translates to: GEQRDDFDFCPLFCTWKLSSQHI*QLLYVD
Trigger: ATCGACATACAGAAGCTGTCAGATGTGCTGAGAAGA...CAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCTCTGCTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR TCA 90 bp GAAGTTGGTTCAGGCTATGCTACTGCCTCCTCAGTTAGAGCACTTCTTTGGGCATCAAGCTTTTGCTTGTaGTCTTGCATCTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: EVGSGYATASSVRALLWASSFCL*SCIFSA
Trigger: TGCTGAGAAGATGCAAGATCACAAGCAAAAGCTTGA...TGCCCAAAGAAGTGCTCTAACTGAGGAGGCAGTAGCATAGCCTGAACCAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR TCA 90 bp AATCTGATTGGCAGCTGTTACTGGTCATTCCCTATATGGTGTGATCATGAGAGACCAGGGAGACTGTTGTaGAATCATCAGGAGACGGAG +
Preference number: 4 (lower is better)
Translates to: NLIGSCYWSFPIWCDHERPGRLL*NHQETE
Trigger: CTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGG...TCTCTCATGATCACACCATATAGGGAATGACCAGTAACAGCTGCCAATCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp AGAGCATGCAGGCAGAGGAAACAGATCTGGTCCAGGAAGTTCAGAGAGGTCGGAGCAATTATCCTAAAATaGTACCCTGAATACCTGAGT +
Preference number: 4 (lower is better)
Translates to: RACRQRKQIWSRKFREVGAIILK*YPEYLS
Trigger: ACTCAGGTATTCAGGGTATCATTTTAGGATAATTGC...TCCGACCTCTCTGAACTTCCTGGACCAGATCTGTTTCCTCTGCCTGCATGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674670.1
CDS-3UTR TCA 90 bp TCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAGGTTTTGGAAGAGAGATTGCAGTGAGCTaGGATCATGCTGTAGCACTC +
Preference number: 4 (lower is better)
Translates to: SSFIRPGFANDLWEGFGREIAVS*DHAVAL
Trigger: GAGTGCTACAGCATGATCTCAGCTCACTGCAATCTC...TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676361.1
CDS-3UTR GCA 90 bp GAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTGTACATCAACACCCGGTTTaGCAGAAAGCCTGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: EGSMGSRDMYIVSNYLPVHQHPV*QKACLR
Trigger: CCTTAAGCAGGCTTTCTGGCAAACCGGGTGTTGATG...TACAGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR GCA 90 bp TCCTCTGTTCTGCACCTGGAAGTTGGTTCAGGCTATGCTACTGCCTCCTCAGTTTGCAGTCTCCAGTTCTaGTGTAAGATCATCAATCTT +
Preference number: 4 (lower is better)
Translates to: SSVLHLEVGSGYATASSVCSLQF*CKIINL
Trigger: AAGATTGATGATCTTACAGCAGAACTGGAGACTGCA...AACTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGAACAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR GCA 90 bp TTTGATTTCTGTCCTCTGTTCTGCACCTGGAAGTTGGTTCAGGCTATGCTACTGACTCCTGCTGCATCTTaGTCAAGTAGTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: FDFCPLFCTWKLVQAMLLTPAAS*SSSSPC
Trigger: GCATGGAGAACTACTTGAGCAAGATGCAGCAGGAGT...CAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR GCA 90 bp TCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAGGTTTTGGAAGACATCAACACCCGGTTTaGCAGAAAGCAGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSFIRPGFANDLWEGFGRHQHPV*QKADPS
Trigger: AGAGGGATCTGCTTTCTGGCAAACCGGGTGTTGATG...TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR GCA 90 bp AGAGATGACTTTGATTTCTGTCCTCTGTTCTGCACCTGGAAGTTGGTTCAGGCTTTCTGTCCTCTGTTCTaGACCTGGAAGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RDDFDFCPLFCTWKLVQAFCPLF*TWKLVQ
Trigger: CTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAA...AGCCTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR GCA 90 bp AATCTGATTGGCAGCTGTTACTGGTCATTCCCTATATGGTGTGATCATGAGAGACTGTGCCCTGCCCTCTaGACACAGTTTCTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NLIGSCYWSFPIWCDHERLCPAL*TQFLKR
Trigger: CCTCTTTAGAAACTGTGTGCAGAGGGCAGGGCACAG...TCTCTCATGATCACACCATATAGGGAATGACCAGTAACAGCTGCCAATCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp AATCTGATTGGCAGCTGTTACTGGTCATTCCCTATATGGTGTGATCATGAGAGATGCCCGGCCTACCTCTaGATGTTTATCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: NLIGSCYWSFPIWCDHERCPAYL*MFILLP
Trigger: AGGAAGGAGGATAAACATGCAGAGGTAGGCCGGGCA...TCTCTCATGATCACACCATATAGGGAATGACCAGTAACAGCTGCCAATCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp CTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGTGCCAGTGGTCCCAGCTACTTaGGAGGTGGAGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LSESLSSNKVLFPVLTVPVVPAT*EVEAEE
Trigger: TTCTTCTGCCTCCACCTCCCAAGTAGCTGGGACCAC...TGGCACTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676361.1
CDS-3UTR CCA 90 bp GGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGGTTTGCCAGAAAGCCTGTaGTCCCAGCTACTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSTYFCGKFSEILSESQGLPESL*SQLLGR
Trigger: CCTCCCAAGTAGCTGGGACCACAGGCTTTCTGGCAA...ACCTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676361.1
3UTR CAA 72 bp GATACACATTTGTCTCAGGTCAGCAGAGGGATGACTTaGAGTTCTGTCCTTTGTCCTGCACCAGTCTATCTC +
Preference number: 4 (lower is better)
Translates to: DTHLSQVSRGMT*SSVLCPAPVYL
Trigger: GAGATAGACTGGTGCAGGACAAAGGACAGAACTCAAAGTCATCCCTCTGCTGACCTGAGACAAATGTGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS-3UTR TCA 90 bp GGCTTTGTTGGTTCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAATGGAAGAAGGTCAGGTaGTTGATAGGTAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: GFVGSSFIRPGFANDLWEWKKVR*LIGRMR
Trigger: TCTCATCCTACCTATCAATCACCTGACCTTCTTCCA...TTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGAACCAACAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR TCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTTTGATGTCTCACTTTaGTCACGATCATGTATAGCA +
Preference number: 4 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLFDVSL*SRSCIA
Trigger: TGCTATACATGATCGTGATCAAAGTGAGACATCAAA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR TCA 90 bp TCCTCTGTTCTGCACCTGGAAGTTGGTTCAGGCTATGCTACTGCCTCCTCAGTTTTTAACAGGTTTTTCTaGAGCTCCTCAATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSVLHLEVGSGYATASSVFNRFF*SSSILS
Trigger: GGACAAAATTGAGGAGCTTCAGAAAAACCTGTTAAA...AACTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGAACAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR GCA 90 bp CTGCAGCCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACAGTGAAGAGCAGTGTTaGCATGGACATCCGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LQPQLKDQHTSVENSQRYSEEQC*HGHPQD
Trigger: ATCTTGCGGATGTCCATGGCAACACTGCTCTTCACT...GTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp TCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAGGTTTTGGAAGAAGTGAAGAGCAGTGTTaGCATGGACATCCGCAAGAT +
Preference number: 4 (lower is better)
Translates to: SSFIRPGFANDLWEGFGRSEEQC*HGHPQD
Trigger: ATCTTGCGGATGTCCATGGCAACACTGCTCTTCACT...TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp AGATACACATTTGTCTCAGGTCAGCAGAGGGATGACTTTGAGTTCTGTCCTTTGACTCCTGCTGCATCTTaGTCAAGTAGTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: RYTFVSGQQRDDFEFCPLTPAAS*SSSSPC
Trigger: GCATGGAGAACTACTTGAGCAAGATGCAGCAGGAGT...CAAAGGACAGAACTCAAAGTCATCCCTCTGCTGACCTGAGACAAATGTGTATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS-3UTR GCA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTATACCTCCTGGAAAATTaGATCCTATTCCCCCAATTG +
Preference number: 4 (lower is better)
Translates to: KAARETVVKSSGDGVVEVYLLEN*ILFPQL
Trigger: CAATTGGGGGAATAGGATGCAATTTTCCAGGAGGTA...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTACCCAGATTGCCCCACTaGACTCCAGTGTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: ILIEINQGVVLQETCLELPRLPH*TPVWVT
Trigger: TGTCACCCACACTGGAGTGCAGTGGGGCAATCTGGG...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTACTTGGCCTCCCAAAGTaGTGCGATTACAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: ILIEINQGVVLQETCLELLGLPK*CDYRRE
Trigger: CTCCCGCCTGTAATCGCAGCACTTTGGGAGGCCAAG...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTAGCAATCTCAGCTCACTaGAAGCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: ILIEINQGVVLQETCLELAISAH*KLCLPG
Trigger: ACCCGGGAGGCAGAGCTTGCAGTGAGCTGAGATTGC...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp CTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCCATCAACACCCGGTTTaGCAGAAAGCCTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LKDQHTSVENSQRYSQNPHQHPV*QKACGP
Trigger: GGGACCACAGGCTTTCTGGCAAACCGGGTGTTGATG...GGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676361.1
CDS-3UTR CCA 90 bp CTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGTGCCATCAGGAGACTCCATGTaGGCTACTGGCATGCCTACA +
Preference number: 4 (lower is better)
Translates to: LSESLSSNKVLFPVLTVPSGDSM*ATGMPT
Trigger: TGTAGGCATGCCAGTAGCCCACATGGAGTCTCCTGA...TGGCACTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676420.1
CDS-3UTR CCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGGTTTGGAAAGGTGATTaGTCAGAATTCCATCTTGTA +
Preference number: 4 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLVWKGD*SEFHLV
Trigger: TACAAGATGGAATTCTGACCAATCACCTTTCCAAAC...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
3UTR CAA 72 bp GATATGTGTTTGTCTCAGGTGAGCAGAGAGATGACTTaGATTTCTGTCCTCTGTTCTGCACCTGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: DMCLSQVSREMT*ISVLCSAPGSW
Trigger: CCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCTCTGCTCACCTGAGACAAACACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR TCA 90 bp CTGCAGCCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTGGAAGAAGGTCAGGTaGTTGATAGGTAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: LQPQLKDQHTSVENSQRYWKKVR*LIGRMR
Trigger: TCTCATCCTACCTATCAATCACCTGACCTTCTTCCA...GTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGGCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR TCA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTAATTGTTCTTTGTGGGTaGTCAGTCTTTTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: KAARETVVKSSGDGVVEVIVLCG*SVFSLS
Trigger: TGAGAGAGAAAAGACTGATCACCCACAAAGAACAAT...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp AAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGCAGCTTTGTGGATCTTaGCGAGATCTCGGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: KDQHTSVENSQRYSQNPKQLCGS*RDLGLG
Trigger: TCCGAGACCGAGATCTCGGCAAGATCCACAAAGCTG...CTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676420.1
CDS-3UTR GCA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTAGCAAAAGGATCTGCTaGACTTTCGCCACATTACCC +
Preference number: 4 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPSKRIC*TFATLP
Trigger: GGGTAATGTGGCGAAAGTGCAGCAGATCCTTTTGCT...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR GCA 90 bp CATGAAGGTCAAGGAAAGACTGAGGAACTGTTCCAGACTGAAAGATCTAACAGAAGTGAAGAGCAGTGTTaGCATGGACATCCGCAAGAT +
Preference number: 4 (lower is better)
Translates to: HEGQGKTEELFQTERSNRSEEQC*HGHPQD
Trigger: ATCTTGCGGATGTCCATGGCAACACTGCTCTTCACT...TCTGTTAGATCTTTCAGTCTGGAACAGTTCCTCAGTCTTTCCTTGACCTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR GCA 90 bp AATCTGATTGGCAGCTGTTACTGGTCATTCCCTATATGGTGTGATCATGAGAGAACTCCTGCTGCATCTTaGTCAAGTAGTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: NLIGSCYWSFPIWCDHERTPAAS*SSSSPC
Trigger: GCATGGAGAACTACTTGAGCAAGATGCAGCAGGAGT...TCTCTCATGATCACACCATATAGGGAATGACCAGTAACAGCTGCCAATCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp CTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCTTGCCCAGGATGGAGTaGAGTGACGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LKDQHTSVENSQRYSQNPLPRME*SDVISA
Trigger: AGCTGAGATCACGTCACTGCACTCCATCCTGGGCAA...GGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR GCA 90 bp AGGATAAGATTATTGTTGCTTTATCACTCTTACCTCCTGGAAAATTGCATCCTAGCAGTGAGCCCAGATTaGCCCACTGCACTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: RIRLLLLYHSYLLENCILAVSPD*PTALQC
Trigger: ACACTGGAGTGCAGTGGGGCAATCTGGGCTCACTGC...TAGGATGCAATTTTCCAGGAGGTAAGAGTGATAAAGCAACAATAATCTTATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTATCTGACCTCCTGATCTaGCTGCCTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: ILIEINQGVVLQETCLELSDLLI*LPWPPK
Trigger: TTTGGGAGGCCAAGGCAGGCAGATCAGGAGGTCAGA...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGAGCCGTCCATTATACTaGGATATTGTTTGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLSRPLY*DIVCVN
Trigger: ATTAACACAAACAATATCCCAGTATAATGGACGGCT...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR CCA 90 bp CACCATGAAACCCAATTGAGGGACATTCTTATATTACCAGACTTTACTCTTCAAAGGTGGCTCCATGACTaGCCTGGTAGTGAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: HHETQLRDILILPDFTLQRWLHD*PGSESG
Trigger: ACCACTCTCACTACCAGGCCAGTCATGGAGCCACCT...TTGAAGAGTAAAGTCTGGTAATATAAGAATGTCCCTCAATTGGGTTTCATGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp GAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTGTAACCACAACTTCATCTTaGCTATCGGAATCTCTATCC +
Preference number: 4 (lower is better)
Translates to: EGSMGSRDMYIVSNYLPVTTTSS*LSESLS
Trigger: GGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGT...TACAGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTTGGAAGAAGGTCAGGTaGTTGATAGGTAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPWKKVR*LIGRMR
Trigger: TCTCATCCTACCTATCAATCACCTGACCTTCTTCCA...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp CTGCAGCCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACCTTCCCAAACACTGGTaGATTCACAGATTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: LQPQLKDQHTSVENSQRYLPKHW*IHRFFR
Trigger: TCGAAAGAATCTGTGAATTCACCAGTGTTTGGGAAG...GTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGGCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676420.1
CDS-3UTR TCA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGAGGGCATCTCTCGTGTaGTGGAACTCAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: NANITSNRANQNCRVTGKRASLV*WNSISR
Trigger: CCTAGAAATTGAGTTCCATCACACGAGAGATGCCCT...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTTCCAAACATGAACAATaGCCACAGTTCCTGCACAAC +
Preference number: 4 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPSKHEQ*PQFLHN
Trigger: GTTGTGCAGGAACTGTGGTCATTGTTCATGTTTGGA...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR TCA 90 bp CAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATTCAGGAGACTCAATGTaGGCATGCTGGTCGATGTGG +
Preference number: 4 (lower is better)
Translates to: QLKDQHTSVENSQRYSQNSGDSM*ACWSMW
Trigger: CCACATCGACCAGCATGCTCACATTGAGTCTCCTGA...ATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675846.1
CDS-3UTR TCA 90 bp ATTCATAGAAGGTACGCTCTCTGGAATACTTCTAGGTTGAGAATTCTTCGCTCTACAGGAGACTTGTCTTaGGTTATGCCTCCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: IHRRYALWNTSRLRILRSTGDLS*VMPPQL
Trigger: TAGCTGAGGAGGCATAACTCAAGACAAGTCTCCTGT...AGAGCGAAGAATTCTCAACCTAGAAGTATTCCAGAGAGCGTACCTTCTATGAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp AGGATAAGATTATTGTTGCTTTATCACTCTTACCTCCTGGAAAATTGCATCCTATCTGACCTCCTGATCTaGCTGCCTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: RIRLLLLYHSYLLENCILSDLLI*LPWPPK
Trigger: TTTGGGAGGCCAAGGCAGGCAGATCAGGAGGTCAGA...TAGGATGCAATTTTCCAGGAGGTAAGAGTGATAAAGCAACAATAATCTTATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp CAGCAATTTACTCTCAAATTGTTCGGAGGAGAAAGTCTTTGTACTAAAACTTCGTCAGGAGACTCCATGTaGGCTACTGGCATGCCTACA +
Preference number: 4 (lower is better)
Translates to: QQFTLKLFGGESLCTKTSSGDSM*ATGMPT
Trigger: TGTAGGCATGCCAGTAGCCCACATGGAGTCTCCTGA...CGAAGTTTTAGTACAAAGACTTTCTCCTCCGAACAATTTGAGAGTAAATTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp CTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGTGCCATGGAAGAAGGTCAGGTaGTTGATAGGTAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: LSESLSSNKVLFPVLTVPWKKVR*LIGRMR
Trigger: TCTCATCCTACCTATCAATCACCTGACCTTCTTCCA...TGGCACTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR TCA 90 bp GAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTGTATATGACTTCTCAGGTTaGTCACTTCTTGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: EGSMGSRDMYIVSNYLPVYDFSG*SLLVPT
Trigger: AGTTGGAACAAGAAGTGATCAACCTGAGAAGTCATA...TACAGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR TCA 90 bp CCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGCTAGATATGTATGGCTaGCCACATATGCCTGTATTC +
Preference number: 4 (lower is better)
Translates to: PQLKDQHTSVENSQRYSQLDMYG*PHMPVF
Trigger: GAATACAGGCATATGTGGTCAGCCATACATATCTAG...CTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR TCA 90 bp GACTTGAATTTCCTATTTATCCTGTTTTATAGGGCCTCTTGTATCACTAGATTCTCCACTTCTTCCAGATaGAAGGCTGCCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: DLNFLFILFYRASCITRFSTSSR*KAARET
Trigger: AGTCTCCCTGGCAGCCTTTCATCTGGAAGAAGTGGA...GAATCTAGTGATACAAGAGGCCCTATAAAACAGGATAAATAGGAAATTCAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp AGGATAAGATTATTGTTGCTTTATCACTCTTACCTCCTGGAAAATTGCATCCTAGTGATCATAGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RIRLLLLYHSYLLENCILVIIAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTTCAGTGAGCTATGATCAC...TAGGATGCAATTTTCCAGGAGGTAAGAGTGATAAAGCAACAATAATCTTATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp CGTTATTGTTCTTTGTGGGTGATCAGTCTTTTCTCTCTCACTATTATTAGAATCATGGTCTTGATCTTCTaGCCTCCTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RYCSLWVISLFSLTIIRIMVLIF*PPDLPA
Trigger: GGCAGGCAGATCAGGAGGTCAGAAGATCAAGACCAT...GATTCTAATAATAGTGAGAGAGAAAAGACTGATCACCCACAAAGAACAATAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp ACAACTAAATACAAGCCATGGATTAGAATGGGATCCTTTTGCTATAAAGGACATCAGCTTTGTGGATCTTaGCGAGATCTCGGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: TTKYKPWIRMGSFCYKGHQLCGS*RDLGLG
Trigger: TCCGAGACCGAGATCTCGGCAAGATCCACAAAGCTG...ATGTCCTTTATAGCAAAAGGATCCCATTCTAATCCATGGCTTGTATTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR GCA 90 bp AACCACAACTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTCAGCTTTGTGGATCTTaGCGAGATCTCGGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: NHNFILTIGISILKQSSIQLCGS*RDLGLG
Trigger: TCCGAGACCGAGATCTCGGCAAGATCCACAAAGCTG...AATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676420.1
CDS-3UTR GCA 90 bp CTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGTGCCACTGAGCAAAAGGATCTaGTGCACTTTCGCCACATTA +
Preference number: 4 (lower is better)
Translates to: LSESLSSNKVLFPVLTVPLSKRI*CTFATL
Trigger: TAATGTGGCGAAAGTGCAGCAGATCCTTTTGCTCAG...TGGCACTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp GGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGGTCTGAGCAAAAGGATCTaGTGCACTTTCGCCACATTA +
Preference number: 4 (lower is better)
Translates to: GSTYFCGKFSEILSESQGLSKRI*CTFATL
Trigger: TAATGTGGCGAAAGTGCAGCAGATCCTTTTGCTCAG...ACCTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp AAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGAGTGAAGAGCAGTGTTaGCATGGACATCCGCAAGAT +
Preference number: 4 (lower is better)
Translates to: KDQHTSVENSQRYSQNPKSEEQC*HGHPQD
Trigger: ATCTTGCGGATGTCCATGGCAACACTGCTCTTCACT...CTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp AGAGATGACTTTGATTTCTGTCCTCTGTTCTGCACCTGGAAGTTGGTTCAGGCTTGTATGTCGATCCTGTaGTTCTTGCAATTGATTTCT +
Preference number: 4 (lower is better)
Translates to: RDDFDFCPLFCTWKLVQACMSIL*FLQLIS
Trigger: AGAAATCAATTGCAAGAAGCACAGGATCGACATACA...AGCCTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR GCA 90 bp CTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGTGCCACTATATCTCTGCTCCTaGTTAAGGAGTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSESLSSNKVLFPVLTVPLYLCS*LRSLQS
Trigger: GCTCTGAAGACTCCTTAAGCAGGAGCAGAGATATAG...TGGCACTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR GCA 90 bp CTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCCCAGGAAGCAGAGATTaGAGTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: LHLDYRNLYPQTKFYFLFPGSRD*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAATCTCTGCTTCCTGG...GAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676361.1
CDS-3UTR CCA 90 bp CTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCTTCCCAACAGTGAGGTaGATGGGAAGAGTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: LKDQHTSVENSQRYSQNPFPTVR*MGRVGK
Trigger: TTTACCCACTCTTCCCATCCACCTCACTGTTGGGAA...GGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR CCA 90 bp CGTTATTGTTCTTTGTGGGTGATCAGTCTTTTCTCTCTCACTATTATTAGAATCGAGGTCGGAGTAAGCTaGGGATGTACCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RYCSLWVISLFSLTIIRIEVGVS*GCTWKL
Trigger: CAACTTCCAGGTACATCCCCAGCTTACTCCGACCTC...GATTCTAATAATAGTGAGAGAGAAAAGACTGATCACCCACAAAGAACAATAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674670.1
3UTR CAA 72 bp ATTCATAGAAGGTACGCTCTCTGGAATACTTCTAGGTaGAGAATTCTTCGCTCTCAGCGTTCTGAAGATATC +
Preference number: 4 (lower is better)
Translates to: IHRRYALWNTSR*RILRSQRSEDI
Trigger: GATATCTTCAGAACGCTGAGAGCGAAGAATTCTCAACCTAGAAGTATTCCAGAGAGCGTACCTTCTATGAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp CTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGTGCCACTTCCCAAACACTGGTaGATTCACAGATTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: LSESLSSNKVLFPVLTVPLPKHW*IHRFFR
Trigger: TCGAAAGAATCTGTGAATTCACCAGTGTTTGGGAAG...TGGCACTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676420.1
CDS-3UTR TCA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTCAATCTAGAATGGTATaGTTCAACTTCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPQSRMV*FNFCFQ
Trigger: CTGGAAGCAGAAGTTGAATCATACCATTCTAGATTG...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp GAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTGTATCCTGCACAACAAAATaGTGTCTAAGTCCAATTAGA +
Preference number: 4 (lower is better)
Translates to: EGSMGSRDMYIVSNYLPVSCTTK*CLSPIR
Trigger: TCTAATTGGACTTAGACATCATTTTGTTGTGCAGGA...TACAGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR TCA 90 bp GAAATTCAGCAGATACCACTGTTAGTGATCAATGCTAACATTACCAGTAACAGGACAGGTAAGATGCAATaGGAAGATCACTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: EIQQIPLLVINANITSNRTGKMQ*EDHWVT
Trigger: AGTGACCCAGTGATCTTCTCATTGCATCTTACCTGT...CCTGTTACTGGTAATGTTAGCATTGATCACTAACAGTGGTATCTGCTGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR GCA 90 bp AAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGCTGAGCAAAAGGATCTaGTGCACTTTCGCCACATTA +
Preference number: 4 (lower is better)
Translates to: KDQHTSVENSQRYSQNPKLSKRI*CTFATL
Trigger: TAATGTGGCGAAAGTGCAGCAGATCCTTTTGCTCAG...CTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp CAGCAATTTACTCTCAAATTGTTCGGAGGAGAAAGTCTTTGTACTAAAACTTCGGTTTGCCAGAAAGCCTaGTTAAGGAGTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QQFTLKLFGGESLCTKTSVCQKA*LRSLQS
Trigger: GCTCTGAAGACTCCTTAAGCAGGCTTTCTGGCAAAC...CGAAGTTTTAGTACAAAGACTTTCTCCTCCGAACAATTTGAGAGTAAATTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR GCA 90 bp AACCACAACTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTCATCAACACCCGGTTTaGCAGAAAGCCTGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: NHNFILTIGISILKQSSIHQHPV*QKACLR
Trigger: CCTTAAGCAGGCTTTCTGGCAAACCGGGTGTTGATG...AATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675187.1
ENST00000676420.1
CDS-3UTR GCA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTTGCAGTCTCCAGTTCTaGTGTAAGATCATCAATCTT +
Preference number: 4 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPCSLQF*CKIINL
Trigger: AAGATTGATGATCTTACAGCAGAACTGGAGACTGCA...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR GCA 90 bp CAGCAATTTACTCTCAAATTGTTCGGAGGAGAAAGTCTTTGTACTAAAACTTCGACTCCTGCTGCATCTTaGTCAAGTAGTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: QQFTLKLFGGESLCTKTSTPAAS*SSSSPC
Trigger: GCATGGAGAACTACTTGAGCAAGATGCAGCAGGAGT...CGAAGTTTTAGTACAAAGACTTTCTCCTCCGAACAATTTGAGAGTAAATTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR GCA 90 bp GTGATTCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCACAGCAGATGAAATGTaGCATAGATGGTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: VILYLPLVLILMRTSYHFTADEM*HRWSST
Trigger: GGTACTGGACCATCTATGGCACATTTCATCTGCTGT...GAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGAATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR CCA 90 bp AACCACAACTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTCTAGTTTCGAACTCCTaGGTCAAGCAATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NHNFILTIGISILKQSSILVSNS*VKQSSC
Trigger: GCAGGAGGATTGCTTGACCCAGGAGTTCGAAACTAG...AATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676420.1
CDS-3UTR CCA 90 bp CTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGCTCTTCCTTATTTCCTaGCTCCCTCAGGTCTTAATG +
Preference number: 4 (lower is better)
Translates to: LDYRNLYPQTKFYFLFSQLFLIS*LPQVLM
Trigger: CATTAAGACCTGAGGGAGCCAGGAAATAAGGAAGAG...CTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR CCA 90 bp AATCTGATTGGCAGCTGTTACTGGTCATTCCCTATATGGTGTGATCATGAGAGAATCACTCTTACCTCCTaGAAAATTGCATCCTATTCC +
Preference number: 4 (lower is better)
Translates to: NLIGSCYWSFPIWCDHERITLTS*KIASYS
Trigger: GGAATAGGATGCAATTTTCCAGGAGGTAAGAGTGAT...TCTCTCATGATCACACCATATAGGGAATGACCAGTAACAGCTGCCAATCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp GACTTGAATTTCCTATTTATCCTGTTTTATAGGGCCTCTTGTATCACTAGATTCCACCCTGTTGCCTTCTaGAAGTTGGTTCAGGCTATG +
Preference number: 4 (lower is better)
Translates to: DLNFLFILFYRASCITRFHPVAF*KLVQAM
Trigger: CATAGCCTGAACCAACTTCCAGAAGGCAACAGGGTG...GAATCTAGTGATACAAGAGGCCCTATAAAACAGGATAAATAGGAAATTCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675439.1
CDS-3UTR TCA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGCAGCTTTGTTGCTACTaGTATGTCCTCATTATAGAC +
Preference number: 4 (lower is better)
Translates to: NANITSNRANQNCRVTGKQLCCY*YVLIID
Trigger: GTCTATAATGAGGACATATCAGTAGCAACAAAGCTG...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp GTGATTCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCACCACAACTTCATCTTaGCTATCGGAATCTCTATCC +
Preference number: 4 (lower is better)
Translates to: VILYLPLVLILMRTSYHFTTTSS*LSESLS
Trigger: GGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGT...GAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGAATCAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR TCA 90 bp CTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGACCACAACTTCATCTTaGCTATCGGAATCTCTATCC +
Preference number: 4 (lower is better)
Translates to: LDYRNLYPQTKFYFLFSQTTTSS*LSESLS
Trigger: GGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGT...CTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR TCA 90 bp CCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAAACCACAACTTCATCTTaGCTATCGGAATCTCTATCC +
Preference number: 4 (lower is better)
Translates to: PAKGSTYFCGKFSEILSETTTSS*LSESLS
Trigger: GGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGT...TTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR TCA 90 bp CATGAAGGTCAAGGAAAGACTGAGGAACTGTTCCAGACTGAAAGATCTAACAGATTTGATGTCTCACTTTaGTCACGATCATGTATAGCA +
Preference number: 4 (lower is better)
Translates to: HEGQGKTEELFQTERSNRFDVSL*SRSCIA
Trigger: TGCTATACATGATCGTGATCAAAGTGAGACATCAAA...TCTGTTAGATCTTTCAGTCTGGAACAGTTCCTCAGTCTTTCCTTGACCTTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTTTTAACAGGTTTTTCTaGAGCTCCTCAATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPFNRFF*SSSILS
Trigger: GGACAAAATTGAGGAGCTTCAGAAAAACCTGTTAAA...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp CACCATGAAACCCAATTGAGGGACATTCTTATATTACCAGACTTTACTCTTCAAACAGGTAAGATGCAATaGGAAGATCACTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: HHETQLRDILILPDFTLQTGKMQ*EDHWVT
Trigger: AGTGACCCAGTGATCTTCTCATTGCATCTTACCTGT...TTGAAGAGTAAAGTCTGGTAATATAAGAATGTCCCTCAATTGGGTTTCATGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR TCA 90 bp AGGATAAGATTATTGTTGCTTTATCACTCTTACCTCCTGGAAAATTGCATCCTAACAGGAGACTTGTCTTaGGTTATGCCTCCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: RIRLLLLYHSYLLENCILTGDLS*VMPPQL
Trigger: TAGCTGAGGAGGCATAACTCAAGACAAGTCTCCTGT...TAGGATGCAATTTTCCAGGAGGTAAGAGTGATAAAGCAACAATAATCTTATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp TTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTGGCAGAAGAATTGTGTaGACCCAGGAAGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: FILTIGISILKQSSISCSGRRIV*TQEAEI
Trigger: AATCTCTGCTTCCTGGGTTCACACAATTCTTCTGCC...AGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676361.1
CDS-3UTR GCA 90 bp CAGCAATTTACTCTCAAATTGTTCGGAGGAGAAAGTCTTTGTACTAAAACTTCGCTGAGCAAAAGGATCTaGTGCACTTTCGCCACATTA +
Preference number: 4 (lower is better)
Translates to: QQFTLKLFGGESLCTKTSLSKRI*CTFATL
Trigger: TAATGTGGCGAAAGTGCAGCAGATCCTTTTGCTCAG...CGAAGTTTTAGTACAAAGACTTTCTCCTCCGAACAATTTGAGAGTAAATTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR GCA 90 bp CAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCTGAGCAAAAGGATCTaGTGCACTTTCGCCACATTA +
Preference number: 4 (lower is better)
Translates to: QLKDQHTSVENSQRYSQNLSKRI*CTFATL
Trigger: TAATGTGGCGAAAGTGCAGCAGATCCTTTTGCTCAG...ATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp AAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAACTGAGCAAAAGGATCTaGTGCACTTTCGCCACATTA +
Preference number: 4 (lower is better)
Translates to: KGSTYFCGKFSEILSESQLSKRI*CTFATL
Trigger: TAATGTGGCGAAAGTGCAGCAGATCCTTTTGCTCAG...TTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp AACCACAACTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTAGTGAAGAGCAGTGTTaGCATGGACATCCGCAAGAT +
Preference number: 4 (lower is better)
Translates to: NHNFILTIGISILKQSSISEEQC*HGHPQD
Trigger: ATCTTGCGGATGTCCATGGCAACACTGCTCTTCACT...AATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp CACCATGAAACCCAATTGAGGGACATTCTTATATTACCAGACTTTACTCTTCAATGTGGGCTACTGGCATaGCTACATTTCTTGTATCCT +
Preference number: 4 (lower is better)
Translates to: HHETQLRDILILPDFTLQCGLLA*LHFLYP
Trigger: AGGATACAAGAAATGTAGGCATGCCAGTAGCCCACA...TTGAAGAGTAAAGTCTGGTAATATAAGAATGTCCCTCAATTGGGTTTCATGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR GCA 90 bp CTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTGTGGGCTACTGGCATaGCTACATTTCTTGTATCCT +
Preference number: 4 (lower is better)
Translates to: LHLDYRNLYPQTKFYFLFCGLLA*LHFLYP
Trigger: AGGATACAAGAAATGTAGGCATGCCAGTAGCCCACA...GAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676420.1
CDS-3UTR GCA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTTGTATGTCGATCCTGTaGTTCTTGCAATTGATTTCT +
Preference number: 4 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPCMSIL*FLQLIS
Trigger: AGAAATCAATTGCAAGAAGCACAGGATCGACATACA...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR GCA 90 bp CTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAGCTCTCTATATCTCTaGTCCTGCTTAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LKDQHTSVENSQRYSQNPSSLYL*SCLRSL
Trigger: AAGACTCCTTAAGCAGGAGCAGAGATATAGAGAGCT...GGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR GCA 90 bp CAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATTTCAAACAAATCTCTTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: QLKDQHTSVENSQRYSQNFKQIS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAAGAGATTTGTTTGAA...ATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR GCA 90 bp GTGATTCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCATGGCTGACCACATATaGCTGTATTCATCTACAGCA +
Preference number: 4 (lower is better)
Translates to: VILYLPLVLILMRTSYHFMADHI*LYSSTA
Trigger: TGCTGTAGATGAATACAGGCATATGTGGTCAGCCAT...GAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGAATCAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR CCA 90 bp CAGCAATTTACTCTCAAATTGTTCGGAGGAGAAAGTCTTTGTACTAAAACTTCGTCCATCTCCAGTGTTTaGAGACTCAGTTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QQFTLKLFGGESLCTKTSSISSV*RLSSSC
Trigger: ACAGCTTGAACTGAGTCTCCAAACACTGGAGATGGA...CGAAGTTTTAGTACAAAGACTTTCTCCTCCGAACAATTTGAGAGTAAATTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CCA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTAGCCATGGATTAGAATaGGATCCTTTTGCTATAAAG +
Preference number: 4 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPSHGLE*DPFAIK
Trigger: CTTTATAGCAAAAGGATCCCATTCTAATCCATGGCT...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR CCA 90 bp GACTTGAATTTCCTATTTATCCTGTTTTATAGGGCCTCTTGTATCACTAGATTCTTGCCTTCTGGAAGTTaGTTCAGGCTATGCTACTGC +
Preference number: 4 (lower is better)
Translates to: DLNFLFILFYRASCITRFLPSGS*FRLCYC
Trigger: GCAGTAGCATAGCCTGAACCAACTTCCAGAAGGCAA...GAATCTAGTGATACAAGAGGCCCTATAAAACAGGATAAATAGGAAATTCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675439.1
CDS-3UTR TCA 90 bp AAGGCTTTCAACCACAACTTCATCTTGACTATCGGAATCTCTATCCTCAAACAACAGCTTTGTTGCTACTaGTATGTCCTCATTATAGAC +
Preference number: 4 (lower is better)
Translates to: KAFNHNFILTIGISILKQQLCCY*YVLIID
Trigger: GTCTATAATGAGGACATATCAGTAGCAACAAAGCTG...TTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTTGAAAGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR TCA 90 bp AAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGCAGCTTTGTTGCTACTaGTATGTCCTCATTATAGAC +
Preference number: 4 (lower is better)
Translates to: KDQHTSVENSQRYSQNPKQLCCY*YVLIID
Trigger: GTCTATAATGAGGACATATCAGTAGCAACAAAGCTG...CTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR TCA 90 bp ATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACACCACAACTTCATCTTaGCTATCGGAATCTCTATCC +
Preference number: 4 (lower is better)
Translates to: ILTIGISILKQSSISCSHTTTSS*LSESLS
Trigger: GGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGT...GTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR TCA 90 bp AAAATAACATTACAGAGGAGAAATTCAGCAGATACCACTGTTAGTGATCAATGCTCTTCTCAGCACATCTaGCAGCTTCTGTATGTCGAT +
Preference number: 4 (lower is better)
Translates to: KITLQRRNSADTTVSDQCSSQHI*QLLYVD
Trigger: ATCGACATACAGAAGCTGTCAGATGTGCTGAGAAGA...GCATTGATCACTAACAGTGGTATCTGCTGAATTTCTCCTCTGTAATGTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp CACCATGAAACCCAATTGAGGGACATTCTTATATTACCAGACTTTACTCTTCAATCAAGCTTTTGCTTGTaGTCTTGCATCTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HHETQLRDILILPDFTLQSSFCL*SCIFSA
Trigger: TGCTGAGAAGATGCAAGATCACAAGCAAAAGCTTGA...TTGAAGAGTAAAGTCTGGTAATATAAGAATGTCCCTCAATTGGGTTTCATGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGTCCTGCACAACAAAATaGTGTCTAAGTCCAATTAGA +
Preference number: 4 (lower is better)
Translates to: NANITSNRANQNCRVTGKSCTTK*CLSPIR
Trigger: TCTAATTGGACTTAGACATCATTTTGTTGTGCAGGA...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR GCA 90 bp CATGAAGGTCAAGGAAAGACTGAGGAACTGTTCCAGACTGAAAGATCTAACAGAAAATTAGTTGGTGACTaGTTTCCAACTTATCTACTG +
Preference number: 4 (lower is better)
Translates to: HEGQGKTEELFQTERSNRKLVGD*FPTYLL
Trigger: CAGTAGATAAGTTGGAAAGCAGTCACCAACTAATTT...TCTGTTAGATCTTTCAGTCTGGAACAGTTCCTCAGTCTTTCCTTGACCTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR GCA 90 bp CCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAAATTAGTTGGTGACTaGTTTCCAACTTATCTACTG +
Preference number: 4 (lower is better)
Translates to: PQLKDQHTSVENSQRYSQKLVGD*FPTYLL
Trigger: CAGTAGATAAGTTGGAAAGCAGTCACCAACTAATTT...CTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CCA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGGTTTGGAAAGGTGATTaGTCAGAATTCCATCTTGTA +
Preference number: 4 (lower is better)
Translates to: NANITSNRANQNCRVTGKVWKGD*SEFHLV
Trigger: TACAAGATGGAATTCTGACCAATCACCTTTCCAAAC...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CCA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTAGCCGTCCATTATACTaGGATATTGTTTGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPSRPLY*DIVCVN
Trigger: ATTAACACAAACAATATCCCAGTATAATGGACGGCT...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CCA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTACTAAATACAAGCCATaGATTAGAATGGGATCCTTT +
Preference number: 4 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPTKYKP*IRMGSF
Trigger: AAAGGATCCCATTCTAATCCATGGCTTGTATTTAGT...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR CCA 90 bp AAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGGGTGGATGGGAAGAGTaGGTAAATTTTGCTCTATTT +
Preference number: 4 (lower is better)
Translates to: KDQHTSVENSQRYSQNPKGGWEE*VNFALF
Trigger: AAATAGAGCAAAATTTACCCACTCTTCCCATCCACC...CTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR CCA 90 bp TCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCTATTAGAAATGTGCCATAGATaGTCCAGTACCTCCATCCTT +
Preference number: 4 (lower is better)
Translates to: SISSSCPNPNADIISLLLEMCHR*SSTSIL
Trigger: AAGGATGGAGGTACTGGACCATCTATGGCACATTTC...TAATAGAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR CCA 90 bp AGGATAAGATTATTGTTGCTTTATCACTCTTACCTCCTGGAAAATTGCATCCTACAGACTGAAGTATGGTaGTGTGATCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RIRLLLLYHSYLLENCILQTEVW*CDHSSL
Trigger: CAGTGAGCTATGATCACACCACCATACTTCAGTCTG...TAGGATGCAATTTTCCAGGAGGTAAGAGTGATAAAGCAACAATAATCTTATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp AAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAACAGCTTTGTTGCTACTaGTATGTCCTCATTATAGAC +
Preference number: 4 (lower is better)
Translates to: KGSTYFCGKFSEILSESQQLCCY*YVLIID
Trigger: GTCTATAATGAGGACATATCAGTAGCAACAAAGCTG...TTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR TCA 90 bp ATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACCAGCTTTGTTGCTACTaGTATGTCCTCATTATAGAC +
Preference number: 4 (lower is better)
Translates to: ILTIGISILKQSSISCSHQLCCY*YVLIID
Trigger: GTCTATAATGAGGACATATCAGTAGCAACAAAGCTG...GTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR TCA 90 bp ACAACTAAATACAAGCCATGGATTAGAATGGGATCCTTTTGCTATAAAGGACATCTTCCCAAACACTGGTaGATTCACAGATTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: TTKYKPWIRMGSFCYKGHLPKHW*IHRFFR
Trigger: TCGAAAGAATCTGTGAATTCACCAGTGTTTGGGAAG...ATGTCCTTTATAGCAAAAGGATCCCATTCTAATCCATGGCTTGTATTTAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR TCA 90 bp TTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCTTCCCAAACACTGGTaGATTCACAGATTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: FILTIGISILKQSSISCSLPKHW*IHRFFR
Trigger: TCGAAAGAATCTGTGAATTCACCAGTGTTTGGGAAG...AGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676420.1
CDS-3UTR GCA 90 bp GGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGGTAAATTAGTTGGTGACTaGTTTCCAACTTATCTACTG +
Preference number: 4 (lower is better)
Translates to: GSTYFCGKFSEILSESQGKLVGD*FPTYLL
Trigger: CAGTAGATAAGTTGGAAAGCAGTCACCAACTAATTT...ACCTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp AAGGCTTTCAACCACAACTTCATCTTGACTATCGGAATCTCTATCCTCAAACAATTCCTGTTCTCACAGTaGCATATGTTGCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: KAFNHNFILTIGISILKQFLFSQ*HMLLLN
Trigger: ATTTAGAAGCAACATATGGCACTGTGAGAACAGGAA...TTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTTGAAAGCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp CTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCTTCCTGTTCTCACAGTaGCATATGTTGCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: LKDQHTSVENSQRYSQNPFLFSQ*HMLLLN
Trigger: ATTTAGAAGCAACATATGGCACTGTGAGAACAGGAA...GGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp CGTTATTGTTCTTTGTGGGTGATCAGTCTTTTCTCTCTCACTATTATTAGAATCTACCTCCTGGAAAATTaGATCCTATTCCCCCAATTG +
Preference number: 4 (lower is better)
Translates to: RYCSLWVISLFSLTIIRIYLLEN*ILFPQL
Trigger: CAATTGGGGGAATAGGATGCAATTTTCCAGGAGGTA...GATTCTAATAATAGTGAGAGAGAAAAGACTGATCACCCACAAAGAACAATAACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp CCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAAGTTTGGAAAGGTGATTaGTCAGAATTCCATCTTGTA +
Preference number: 4 (lower is better)
Translates to: PAKGSTYFCGKFSEILSEVWKGD*SEFHLV
Trigger: TACAAGATGGAATTCTGACCAATCACCTTTCCAAAC...TTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676420.1
CDS-3UTR CCA 90 bp AAGGCTTTCAACCACAACTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAGCATGCTGGTCGATGTaGAGAAAAGTAATCTTTAAT +
Preference number: 4 (lower is better)
Translates to: KAFNHNFILTIGISILKQACWSM*RKVIFN
Trigger: ATTAAAGATTACTTTTCTCCACATCGACCAGCATGC...TTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTTGAAAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675846.1
CDS-3UTR CCA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTACGTTCCACTTCCTTCTaGCTTCTATTGTTGCATTTA +
Preference number: 4 (lower is better)
Translates to: ILIEINQGVVLQETCLELRSTSF*LLLLHL
Trigger: TAAATGCAACAATAGAAGCCAGAAGGAAGTGGAACG...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
3UTR CAA 72 bp ATTATTGTTGCTTTATCACTCTTACCTCCTGGAAAATaGCATCCTATTCCCCCAATTGCAACCTCATCTTTT +
Preference number: 4 (lower is better)
Translates to: IIVALSLLPPGK*HPIPPIATSSF
Trigger: AAAAGATGAGGTTGCAATTGGGGGAATAGGATGCAATTTTCCAGGAGGTAAGAGTGATAAAGCAACAATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp CGTTATTGTTCTTTGTGGGTGATCAGTCTTTTCTCTCTCACTATTATTAGAATCATTGTTCTTTGTGGGTaGTCAGTCTTTTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RYCSLWVISLFSLTIIRIIVLCG*SVFSLS
Trigger: TGAGAGAGAAAAGACTGATCACCCACAAAGAACAAT...GATTCTAATAATAGTGAGAGAGAAAAGACTGATCACCCACAAAGAACAATAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp CTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAATTAGTTGGTGACTaGTTTCCAACTTATCTACTG +
Preference number: 4 (lower is better)
Translates to: LKDQHTSVENSQRYSQNPKLVGD*FPTYLL
Trigger: CAGTAGATAAGTTGGAAAGCAGTCACCAACTAATTT...GGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp CAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATTTCCTGTTCTCACAGTaGCATATGTTGCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: QLKDQHTSVENSQRYSQNFLFSQ*HMLLLN
Trigger: ATTTAGAAGCAACATATGGCACTGTGAGAACAGGAA...ATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp CTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTTCCTGTTCTCACAGTaGCATATGTTGCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: LHLDYRNLYPQTKFYFLFFLFSQ*HMLLLN
Trigger: ATTTAGAAGCAACATATGGCACTGTGAGAACAGGAA...GAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp AAAATAACATTACAGAGGAGAAATTCAGCAGATACCACTGTTAGTGATCAATGCTGCAGTCTCCAGTTCTaGTGTAAGATCATCAATCTT +
Preference number: 4 (lower is better)
Translates to: KITLQRRNSADTTVSDQCCSLQF*CKIINL
Trigger: AAGATTGATGATCTTACAGCAGAACTGGAGACTGCA...GCATTGATCACTAACAGTGGTATCTGCTGAATTTCTCCTCTGTAATGTTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR GCA 90 bp CTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCCTCAGGAGACTCTTCTaGTTGTTCATTTCCTATATT +
Preference number: 4 (lower is better)
Translates to: LHLDYRNLYPQTKFYFLFLRRLF*LFISYI
Trigger: AATATAGGAAATGAACAAGCAGAAGAGTCTCCTGAG...GAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675187.1
CDS-3UTR CCA 90 bp CAGCAATTTACTCTCAAATTGTTCGGAGGAGAAAGTCTTTGTACTAAAACTTCGAGCCATGGATTAGAATaGGATCCTTTTGCTATAAAG +
Preference number: 4 (lower is better)
Translates to: QQFTLKLFGGESLCTKTSSHGLE*DPFAIK
Trigger: CTTTATAGCAAAAGGATCCCATTCTAATCCATGGCT...CGAAGTTTTAGTACAAAGACTTTCTCCTCCGAACAATTTGAGAGTAAATTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR CCA 90 bp CAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATAATTCTAGATATGTATaGCTGACCACATATGCCTGT +
Preference number: 4 (lower is better)
Translates to: QLKDQHTSVENSQRYSQNNSRYV*LTTYAC
Trigger: ACAGGCATATGTGGTCAGCCATACATATCTAGAATT...ATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR CCA 90 bp CGTTATTGTTCTTTGTGGGTGATCAGTCTTTTCTCTCTCACTATTATTAGAATCATCACTCTTACCTCCTaGAAAATTGCATCCTATTCC +
Preference number: 4 (lower is better)
Translates to: RYCSLWVISLFSLTIIRIITLTS*KIASYS
Trigger: GGAATAGGATGCAATTTTCCAGGAGGTAAGAGTGAT...GATTCTAATAATAGTGAGAGAGAAAAGACTGATCACCCACAAAGAACAATAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CCA 90 bp CGTTATTGTTCTTTGTGGGTGATCAGTCTTTTCTCTCTCACTATTATTAGAATCCGTTCCACTTCCTTCTaGCTTCTATTGTTGCATTTA +
Preference number: 4 (lower is better)
Translates to: RYCSLWVISLFSLTIIRIRSTSF*LLLLHL
Trigger: TAAATGCAACAATAGAAGCCAGAAGGAAGTGGAACG...GATTCTAATAATAGTGAGAGAGAAAAGACTGATCACCCACAAAGAACAATAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp ACAACTAAATACAAGCCATGGATTAGAATGGGATCCTTTTGCTATAAAGGACATACCATGAAACCCAATTaGGGGACATTCTTATATTAC +
Preference number: 4 (lower is better)
Translates to: TTKYKPWIRMGSFCYKGHTMKPN*GTFLYY
Trigger: GTAATATAAGAATGTCCCTCAATTGGGTTTCATGGT...ATGTCCTTTATAGCAAAAGGATCCCATTCTAATCCATGGCTTGTATTTAGTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR TCA 90 bp GACTTGAATTTCCTATTTATCCTGTTTTATAGGGCCTCTTGTATCACTAGATTCTCACTAGATTCTAATTaGAATAAACCAGGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: DLNFLFILFYRASCITRFSLDSN*NKPGGC
Trigger: ACAACCCCCTGGTTTATTTCAATTAGAATCTAGTGA...GAATCTAGTGATACAAGAGGCCCTATAAAACAGGATAAATAGGAAATTCAAGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR TCA 90 bp AGGATAAGATTATTGTTGCTTTATCACTCTTACCTCCTGGAAAATTGCATCCTATCACTAGATTCTAATTaGAATAAACCAGGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: RIRLLLLYHSYLLENCILSLDSN*NKPGGC
Trigger: ACAACCCCCTGGTTTATTTCAATTAGAATCTAGTGA...TAGGATGCAATTTTCCAGGAGGTAAGAGTGATAAAGCAACAATAATCTTATCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR GCA 90 bp ACAACTAAATACAAGCCATGGATTAGAATGGGATCCTTTTGCTATAAAGGACATTTCCTGTTCTCACAGTaGCATATGTTGCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: TTKYKPWIRMGSFCYKGHFLFSQ*HMLLLN
Trigger: ATTTAGAAGCAACATATGGCACTGTGAGAACAGGAA...ATGTCCTTTATAGCAAAAGGATCCCATTCTAATCCATGGCTTGTATTTAGTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR GCA 90 bp TTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTTCCATTACATACACTTaGTTCTTTGCCCTTCATTCA +
Preference number: 4 (lower is better)
Translates to: FILTIGISILKQSSISCSSITYT*FFALHS
Trigger: TGAATGAAGGGCAAAGAAGCAAGTGTATGTAATGGA...AGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR GCA 90 bp CAGCAATTTACTCTCAAATTGTTCGGAGGAGAAAGTCTTTGTACTAAAACTTCGTTTTCCAACTCCTGCTaGATCTGTAAAAATAGATTG +
Preference number: 4 (lower is better)
Translates to: QQFTLKLFGGESLCTKTSFSNSC*ICKNRL
Trigger: CAATCTATTTTTACAGATGCAGCAGGAGTTGGAAAA...CGAAGTTTTAGTACAAAGACTTTCTCCTCCGAACAATTTGAGAGTAAATTGCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676280.1
CDS-3UTR GCA 90 bp TTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTAAATTAGTTGGTGACTaGTTTCCAACTTATCTACTG +
Preference number: 4 (lower is better)
Translates to: FILTIGISILKQSSISCSKLVGD*FPTYLL
Trigger: CAGTAGATAAGTTGGAAAGCAGTCACCAACTAATTT...AGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR GCA 90 bp AAAATAACATTACAGAGGAGAAATTCAGCAGATACCACTGTTAGTGATCAATGCAGAATGGGATCCTTTTaGTATAAAGGACATTACAGA +
Preference number: 4 (lower is better)
Translates to: KITLQRRNSADTTVSDQCRMGSF*YKGHYR
Trigger: TCTGTAATGTCCTTTATAGCAAAAGGATCCCATTCT...GCATTGATCACTAACAGTGGTATCTGCTGAATTTCTCCTCTGTAATGTTATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR CCA 90 bp ACAACTAAATACAAGCCATGGATTAGAATGGGATCCTTTTGCTATAAAGGACATACTAAATACAAGCCATaGATTAGAATGGGATCCTTT +
Preference number: 4 (lower is better)
Translates to: TTKYKPWIRMGSFCYKGHTKYKP*IRMGSF
Trigger: AAAGGATCCCATTCTAATCCATGGCTTGTATTTAGT...ATGTCCTTTATAGCAAAAGGATCCCATTCTAATCCATGGCTTGTATTTAGTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS CCA 90 bp ACACCCGGTTTGCCAGAAAGCCTGTGGTCCCAGCTACTTGGGAGGTaGAGGCAGAAGAATTGTGTGAACCCAGGAAGCAGAGATTGCAGT +
Preference number: 5 (lower is better)
Translates to: TPGLPESLWSQLLGR*RQKNCVNPGSRDCS
Trigger: ACTGCAATCTCTGCTTCCTGGGTTCACACAATTCTTCTGCCTCCACCTCCCAAGTAGCTGGGACCACAGGCTTTCTGGCAAACCGGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676361.1
CDS TCA 90 bp GAGCCGTCCTGTTCATCTTGTCTCTATCGTTCAAGCCATTCTTCCTaGGCAAAAGGATCTGCTGCACTTTCGCCACATTACCCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: EPSCSSCLYRSSHSS*AKGSAALSPHYPRW
Trigger: CCAGCGCGGGTAATGTGGCGAAAGTGCAGCAGATCCTTTTGCTCAGGAAGAATGGCTTGAACGATAGAGACAAGATGAACAGGACGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376087.5
ENST00000436985.7
ENST00000674697.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
CDS-3UTR CAA 90 bp TGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTGGCATCGTGGCTTACAGGAGACTTGTCTaGAGTTATGCCTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: CPLHTVSKEELYRPGIVAYRRLV*SYASSA
Trigger: AGCTGAGGAGGCATAACTCAAGACAAGTCTCCTGTA...AGCCACGATGCCAGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CAA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGCTGTTCTCGAGAAAGTaGCCTCTGAGCGTCATTTCG +
Preference number: 5 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLLFSRK*PLSVIS
Trigger: CGAAATGACGCTCAGAGGCAACTTTCTCGAGAACAG...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR CAA 90 bp AGAGCATGCAGGCAGAGGAAACAGATCTGGTCCAGGAAGTTCAGAGAGGTCGGATACAGGAGACTTGTCTaGAGTTATGCCTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: RACRQRKQIWSRKFREVGYRRLV*SYASSA
Trigger: AGCTGAGGAGGCATAACTCAAGACAAGTCTCCTGTA...TCCGACCTCTCTGAACTTCCTGGACCAGATCTGTTTCCTCTGCCTGCATGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674670.1
CDS TCA 90 bp AGGTCATCCTGTTCATCTTGTCTCTATCGTTCAAGCCATTCTTCCTaGGCAAAAGGATCTGCTGCACTTTCGCCACATTACCCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: RSSCSSCLYRSSHSS*AKGSAALSPHYPRW
Trigger: CCAGCGCGGGTAATGTGGCGAAAGTGCAGCAGATCCTTTTGCTCAGGAAGAATGGCTTGAACGATAGAGACAAGATGAACAGGATGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675187.1
CDS-3UTR CAA 90 bp CATGAAGGTCAAGGAAAGACTGAGGAACTGTTCCAGACTGAAAGATCTAACAGACCCGCGCTGGCAGCTTaGTGGATCTTGCCGAGATCT +
Preference number: 5 (lower is better)
Translates to: HEGQGKTEELFQTERSNRPALAA*WILPRS
Trigger: AGATCTCGGCAAGATCCACAAAGCTGCCAGCGCGGG...TCTGTTAGATCTTTCAGTCTGGAACAGTTCCTCAGTCTTTCCTTGACCTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTTCCATCTCCAGTGTTaGGAGACTCAGTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLFHLQC*ETQFKL
Trigger: CAGCTTGAACTGAGTCTCCAAACACTGGAGATGGAA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR CAA 90 bp AGAGCATGCAGGCAGAGGAAACAGATCTGGTCCAGGAAGTTCAGAGAGGTCGGATCTCCATGCTATTATTaGAAGCCCGTGGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: RACRQRKQIWSRKFREVGSPCYY*KPVDLR
Trigger: CCTCAAATCCACGGGCTTCAAATAATAGCATGGAGA...TCCGACCTCTCTGAACTTCCTGGACCAGATCTGTTTCCTCTGCCTGCATGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674670.1
CDS-3UTR CAA 90 bp CATCTACAGCAGATGAAATGTGCCATAGATGGTCCAGTACCTCCATCCTTGCCTTCATCAACACCCGGTTaGCCAGAAAGCAGATCCCTC +
Preference number: 5 (lower is better)
Translates to: HLQQMKCAIDGPVPPSLPSSTPG*PESRSL
Trigger: GAGGGATCTGCTTTCTGGCAAACCGGGTGTTGATGA...AGGCAAGGATGGAGGTACTGGACCATCTATGGCACATTTCATCTGCTGTAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676299.1
CDS-3UTR CAA 90 bp ATTTCTGTCCTCTGTTCTGCACCTGGAAGTTGGTTCAGGCTATGCTACTGCCTCTTCTGCACCTGGAAGTaGGTTCAGGCTATGCTACTG +
Preference number: 5 (lower is better)
Translates to: ISVLCSAPGSWFRLCYCLFCTWK*VQAMLL
Trigger: CAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGAA...GAGGCAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR CAA 90 bp GCCACTGTGCCCTGCCCTCTGCACACAGTTTCTAAAGAGGAGCTCTACAGGCCTATCAGTTCATCGTTATaGTTCTTTGTGGGTGATCAG +
Preference number: 5 (lower is better)
Translates to: ATVPCPLHTVSKEELYRPISSSL*FFVGDQ
Trigger: CTGATCACCCACAAAGAACAATAACGATGAACTGAT...AGGCCTGTAGAGCTCCTCTTTAGAAACTGTGTGCAGAGGGCAGGGCACAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS TCA 90 bp CTCAAACGCCGTCTGTGCCCATCCACTATAGTCAGGGCTCCATGGTaGCCATTTATTGAAATGGCTGCTTGTCAAAGTCACTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LKRRLCPSTIVRAPW*PFIEMAACQSHLSS
Trigger: TGAGGACAAGTGACTTTGACAAGCAGCCATTTCAATAAATGGTCACCATGGAGCCCTGACTATAGTGGATGGGCACAGACGGCGTTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490015.1
CDS-3UTR CAA 90 bp CATGAAGGTCAAGGAAAGACTGAGGAACTGTTCCAGACTGAAAGATCTAACAGAGCAGCTTTGTGGATCTaGCCGAGATCTCGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: HEGQGKTEELFQTERSNRAALWI*PRSRSR
Trigger: CCGAGACCGAGATCTCGGCAAGATCCACAAAGCTGC...TCTGTTAGATCTTTCAGTCTGGAACAGTTCCTCAGTCTTTCCTTGACCTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp GGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGGTCCCGCGCTGGCAGCTTaGTGGATCTTGCCGAGATCT +
Preference number: 5 (lower is better)
Translates to: GSTYFCGKFSEILSESQGPALAA*WILPRS
Trigger: AGATCTCGGCAAGATCCACAAAGCTGCCAGCGCGGG...ACCTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676420.1
CDS-3UTR CAA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGACTGTCTTCTCTTTATaGTCAGCCTTGTTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLTVFSL*SALLWA
Trigger: TGCCCACAACAAGGCTGACAATAAAGAGAAGACAGT...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR CAA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTCTCCATGCTATTATTaGAAGCCCGTGGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLSPCYY*KPVDLR
Trigger: CCTCAAATCCACGGGCTTCAAATAATAGCATGGAGA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR CAA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTAGGATGTACCTGGAAGTaGGTTCAGGCTATGCTACTG +
Preference number: 5 (lower is better)
Translates to: KAARETVVKSSGDGVVEVGCTWK*VQAMLL
Trigger: CAGTAGCATAGCCTGAACCAACTTCCAGGTACATCC...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674670.1
CDS TCA 90 bp CTTTACTTCTGTTCATCTTGTCTCTATCGTTCAAGCCATTCTTCCTaGGCAAAAGGATCTGCTGCACTTTCGCCACATTACCCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LYFCSSCLYRSSHSS*AKGSAALSPHYPRW
Trigger: CCAGCGCGGGTAATGTGGCGAAAGTGCAGCAGATCCTTTTGCTCAGGAAGAATGGCTTGAACGATAGAGACAAGATGAACAGAAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676420.1
CDS CCA 90 bp AGTTCTGTCCTTTGTCCTGCACCAGTCTATCTCAGCATTATCCAGTaGCATCTATTGCAGGTCTGTCCTGGAAGTGAGACATTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: SSVLCPAPVYLSIIQ*HLLQVCPGSETLVS
Trigger: ACTGACCAATGTCTCACTTCCAGGACAGACCTGCAATAGATGCCACTGGATAATGCTGAGATAGACTGGTGCAGGACAAAGGACAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS-3UTR CAA 90 bp AAGGCTTTCAACCACAACTTCATCTTGACTATCGGAATCTCTATCCTCAAACAACCCGCGCTGGCAGCTTaGTGGATCTTGCCGAGATCT +
Preference number: 5 (lower is better)
Translates to: KAFNHNFILTIGISILKQPALAA*WILPRS
Trigger: AGATCTCGGCAAGATCCACAAAGCTGCCAGCGCGGG...TTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTTGAAAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGCCCGCGCTGGCAGCTTaGTGGATCTTGCCGAGATCT +
Preference number: 5 (lower is better)
Translates to: LDYRNLYPQTKFYFLFSQPALAA*WILPRS
Trigger: AGATCTCGGCAAGATCCACAAAGCTGCCAGCGCGGG...CTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAACCCGCGCTGGCAGCTTaGTGGATCTTGCCGAGATCT +
Preference number: 5 (lower is better)
Translates to: PAKGSTYFCGKFSEILSEPALAA*WILPRS
Trigger: AGATCTCGGCAAGATCCACAAAGCTGCCAGCGCGGG...TTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676420.1
CDS-3UTR CAA 90 bp GGCTTTGTTGGTTCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAGCTGTCCTGTTTTCGTaGTCACAGACATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GFVGSSFIRPGFANDLWEAVLFS*SQTLSW
Trigger: CCAGCTCAATGTCTGTGACAACGAAAACAGGACAGC...TTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGAACCAACAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGAGCGTCATTTCGCTCTaGAACGACCTGATTCAAATT +
Preference number: 5 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLSVISL*NDLIQI
Trigger: AATTTGAATCAGGTCGTTCAAGAGCGAAATGACGCT...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR CAA 90 bp CTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGGCAGCTTTGTGGATCTaGCCGAGATCTCGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: LDYRNLYPQTKFYFLFSQAALWI*PRSRSR
Trigger: CCGAGACCGAGATCTCGGCAAGATCCACAAAGCTGC...CTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676420.1
CDS-3UTR CAA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGCTCAGCTTGAAGTTTTaGCACAATAGCATGAAACTG +
Preference number: 5 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLLSLKF*HNSMKL
Trigger: CAGTTTCATGCTATTGTGCAAAAACTTCAAGCTGAG...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR CAA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGCTTTTCACTCTCAGCTaGAAGTTTTTGCACAATAGC +
Preference number: 5 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLLFTLS*KFLHNS
Trigger: GCTATTGTGCAAAAACTTCAAGCTGAGAGTGAAAAG...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR CAA 90 bp CAGAGGGATGACTTTGAGTTCTGTCCTTTGTCCTGCACCAGTCTATCTCAGCATTCTCCATGCTATTATTaGAAGCCCGTGGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: QRDDFEFCPLSCTSLSQHSPCYY*KPVDLR
Trigger: CCTCAAATCCACGGGCTTCAAATAATAGCATGGAGA...ATGCTGAGATAGACTGGTGCAGGACAAAGGACAGAACTCAAAGTCATCCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS-3UTR CAA 90 bp ACCTGGAAGTTGGTTCAGGCTATGCTACTGCCTCCTCAGTTAGAGCACTTCTTTTCTCCATGCTATTATTaGAAGCCCGTGGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: TWKLVQAMLLPPQLEHFFSPCYY*KPVDLR
Trigger: CCTCAAATCCACGGGCTTCAAATAATAGCATGGAGA...AAAGAAGTGCTCTAACTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR CAA 90 bp TGTCCTCTGTTCTGCACCTGGAAGTTGGTTCAGGCTATGCTACTGCCTCCTCAGTCAGCAGCAGCTTCTTaGAGTTCTCTAGTTATATTT +
Preference number: 5 (lower is better)
Translates to: CPLFCTWKLVQAMLLPPQSAAAS*SSLVIF
Trigger: AAATATAACTAGAGAACTCAAAGAAGCTGCTGCTGA...CTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGGTGCAGAACAGAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR CAA 90 bp AGATACACATTTGTCTCAGGTCAGCAGAGGGATGACTTTGAGTTCTGTCCTTTGCACTCAGATACACATTaGTCTCAGGTCAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: RYTFVSGQQRDDFEFCPLHSDTH*SQVSRG
Trigger: CCCTCTGCTGACCTGAGACAAATGTGTATCTGAGTG...CAAAGGACAGAACTCAAAGTCATCCCTCTGCTGACCTGAGACAAATGTGTATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS-3UTR CAA 90 bp AGAGAGATGACTTTGATTTCTGTCCTCTGTTCTGCACCTGGAAGTTGGTTCAGGCAGTCAGATATGTGTTaGTCTCAGGTGAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: REMTLISVLCSAPGSWFRQSDMC*SQVSRE
Trigger: CTCTCTGCTCACCTGAGACAAACACATATCTGACTG...CCTGAACCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR CAA 90 bp CTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCTGTGGTCCCAGCTACTaGGGAGGTGGAGGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: LKDQHTSVENSQRYSQNPCGPSY*GGGGRR
Trigger: TCTTCTGCCTCCACCTCCCAAGTAGCTGGGACCACA...GGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676361.1
CDS-3UTR CAA 90 bp AAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGCAGCTTTGTGGATCTaGCCGAGATCTCGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: KGSTYFCGKFSEILSESQAALWI*PRSRSR
Trigger: CCGAGACCGAGATCTCGGCAAGATCCACAAAGCTGC...TTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676420.1
CDS-3UTR CAA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTTCATCAACACCCGGTTaGCCAGAAAGCCTGCTTAAG +
Preference number: 5 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPSSTPG*PESLLK
Trigger: CTTAAGCAGGCTTTCTGGCAAACCGGGTGTTGATGA...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp GGCTTTGTTGGTTCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAACTTGTGGGAAGGTTTaGGAAGAAGGTCAGGTGATT +
Preference number: 5 (lower is better)
Translates to: GFVGSSFIRPGFANDLWETCGKV*EEGQVI
Trigger: AATCACCTGACCTTCTTCCAAAACCTTCCCACAAGT...TTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGAACCAACAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp ACACAAGGTGGCTCCATGACTGGCCTGGTAGTGAGAGTGGTGAACAAAGATCTGTCAGCAGCAGCTTCTTaGAGTTCTCTAGTTATATTT +
Preference number: 5 (lower is better)
Translates to: TQGGSMTGLVVRVVNKDLSAAAS*SSLVIF
Trigger: AAATATAACTAGAGAACTCAAAGAAGCTGCTGCTGA...CAGATCTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS-3UTR CAA 90 bp GTGAGCAGAGAGATGACTTTGATTTCTGTCCTCTGTTCTGCACCTGGAAGTTGGAGCAGAGAGATGACTTaGATTTCTGTCCTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: VSREMTLISVLCSAPGSWSREMT*ISVLCS
Trigger: AGAACAGAGGACAGAAATCAAAGTCATCTCTCTGCT...CCAACTTCCAGGTGCAGAACAGAGGACAGAAATCAAAGTCATCTCTCTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR CAA 90 bp GGCTTTGTTGGTTCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAGTCATCCTGTTCATCTaGTCTCTATCGTTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: GFVGSSFIRPGFANDLWEVILFI*SLSFKP
Trigger: TGGCTTGAACGATAGAGACAAGATGAACAGGATGAC...TTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGAACCAACAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675187.1
CDS-3UTR CAA 90 bp GTGATTCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCTCATCAACACCCGGTTaGCCAGAAAGCCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: VILYLPLVLILMRTSYHFSSTPG*PESLWS
Trigger: GGACCACAGGCTTTCTGGCAAACCGGGTGTTGATGA...GAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676361.1
CDS-3UTR CAA 90 bp AACCACAACTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTGCAGCTTTGTGGATCTaGCCGAGATCTCGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: NHNFILTIGISILKQSSIAALWI*PRSRSR
Trigger: CCGAGACCGAGATCTCGGCAAGATCCACAAAGCTGC...AATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676420.1
CDS-3UTR CAA 90 bp TCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCTATTAGCAGCTTTGTGGATCTaGCCGAGATCTCGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: SISSSCPNPNADIISLLLAALWI*PRSRSR
Trigger: CCGAGACCGAGATCTCGGCAAGATCCACAAAGCTGC...TAATAGAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGTGCCAGCCGTCCTGTTCATCTaGTCTCTATCGTTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: LSESLSSNKVLFPVLTVPAVLFI*SLSFKP
Trigger: TGGCTTGAACGATAGAGACAAGATGAACAGGACGGC...TGGCACTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
CDS-3UTR CAA 90 bp GAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTGTAACTTGTGGGAAGGTTTaGGAAGAAGGTCAGGTGATT +
Preference number: 5 (lower is better)
Translates to: EGSMGSRDMYIVSNYLPVTCGKV*EEGQVI
Trigger: AATCACCTGACCTTCTTCCAAAACCTTCCCACAAGT...TACAGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp CCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGGGGTTTGCTAACGACTaGTGGGAAGGTTTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: PQLKDQHTSVENSQRYSQGFAND*WEGFGR
Trigger: TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCC...CTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGCTGTTCTCGAGAAAGTaGCCTCTGAGCGTCATTTCG +
Preference number: 5 (lower is better)
Translates to: NANITSNRANQNCRVTGKLFSRK*PLSVIS
Trigger: CGAAATGACGCTCAGAGGCAACTTTCTCGAGAACAG...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp AGATACACATTTGTCTCAGGTCAGCAGAGGGATGACTTTGAGTTCTGTCCTTTGCCTGGAAGTGAGACATaGGTCAGTCATCAGAACATA +
Preference number: 5 (lower is better)
Translates to: RYTFVSGQQRDDFEFCPLPGSET*VSHQNI
Trigger: TATGTTCTGATGACTGACCAATGTCTCACTTCCAGG...CAAAGGACAGAACTCAAAGTCATCCCTCTGCTGACCTGAGACAAATGTGTATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS-3UTR CAA 90 bp AAGGCTGCCAGGGAGACTGTTGTGAAATCATCAGGAGACGGAGTTGTAGAAGTAATCAGTTCATCGTTATaGTTCTTTGTGGGTGATCAG +
Preference number: 5 (lower is better)
Translates to: KAARETVVKSSGDGVVEVISSSL*FFVGDQ
Trigger: CTGATCACCCACAAAGAACAATAACGATGAACTGAT...TACTTCTACAACTCCGTCTCCTGATGATTTCACAACAGTCTCCCTGGCAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CAA 90 bp GAAATTCAGCAGATACCACTGTTAGTGATCAATGCTAACATTACCAGTAACAGGGCCGTCCTGTTCATCTaGTCTCTATCGTTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: EIQQIPLLVINANITSNRAVLFI*SLSFKP
Trigger: TGGCTTGAACGATAGAGACAAGATGAACAGGACGGC...CCTGTTACTGGTAATGTTAGCATTGATCACTAACAGTGGTATCTGCTGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp CCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAAGCCGTCCTGTTCATCTaGTCTCTATCGTTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: PAKGSTYFCGKFSEILSEAVLFI*SLSFKP
Trigger: TGGCTTGAACGATAGAGACAAGATGAACAGGACGGC...TTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
CDS-3UTR CAA 90 bp CTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCGCTGTCCTGTTTTCGTaGTCACAGACATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LKDQHTSVENSQRYSQNPAVLFS*SQTLSW
Trigger: CCAGCTCAATGTCTGTGACAACGAAAACAGGACAGC...GGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp GGCTTTGTTGGTTCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAACAAAAGCAGCTTTGTaGCTACTGATATGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: GFVGSSFIRPGFANDLWETKAAL*LLICPH
Trigger: ATGAGGACATATCAGTAGCAACAAAGCTGCTTTTGT...TTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGAACCAACAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGACTTGTGGGAAGGTTTaGGAAGAAGGTCAGGTGATT +
Preference number: 5 (lower is better)
Translates to: PQLKDQHTSVENSQRYSQTCGKV*EEGQVI
Trigger: AATCACCTGACCTTCTTCCAAAACCTTCCCACAAGT...CTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGTGCCAGGGTTTGCTAACGACTaGTGGGAAGGTTTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LSESLSSNKVLFPVLTVPGFAND*WEGFGR
Trigger: TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCC...TGGCACTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp ACTGCCTCCTCAGTTAGAGCACTTCTTTGGGCAACCATTACTCTAGACTTCTCACTCCTCTTGAAGAATTaGGTTCTTTGTATCCAGATG +
Preference number: 5 (lower is better)
Translates to: TASSVRALLWATITLDFSLLLKN*VLCIQM
Trigger: CATCTGGATACAAAGAACCAAATTCTTCAAGAGGAG...TGAGAAGTCTAGAGTAATGGTTGCCCAAAGAAGTGCTCTAACTGAGGAGGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS-3UTR CAA 90 bp ATTGAGGGTTCGATGGGGAGTAGAGATATGTACATAGTCTCAAATTACCTCCCTTCTCCATGCTATTATTaGAAGCCCGTGGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: IEGSMGSRDMYIVSNYLPSPCYY*KPVDLR
Trigger: CCTCAAATCCACGGGCTTCAAATAATAGCATGGAGA...AGGGAGGTAATTTGAGACTATGTACATATCTCTACTCCCCATCGAACCCTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp CAGAGGGATGACTTTGAGTTCTGTCCTTTGTCCTGCACCAGTCTATCTCAGCATTCAGCAGCAGCTTCTTaGAGTTCTCTAGTTATATTT +
Preference number: 5 (lower is better)
Translates to: QRDDFEFCPLSCTSLSQHSAAAS*SSLVIF
Trigger: AAATATAACTAGAGAACTCAAAGAAGCTGCTGCTGA...ATGCTGAGATAGACTGGTGCAGGACAAAGGACAGAACTCAAAGTCATCCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS-3UTR CAA 90 bp CTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCGCCGTCCTGTTCATCTaGTCTCTATCGTTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: LHLDYRNLYPQTKFYFLFAVLFI*SLSFKP
Trigger: TGGCTTGAACGATAGAGACAAGATGAACAGGACGGC...GAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
CDS-3UTR CAA 90 bp CAGCAATTTACTCTCAAATTGTTCGGAGGAGAAAGTCTTTGTACTAAAACTTCGGCTGTCCTGTTTTCGTaGTCACAGACATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QQFTLKLFGGESLCTKTSAVLFS*SQTLSW
Trigger: CCAGCTCAATGTCTGTGACAACGAAAACAGGACAGC...CGAAGTTTTAGTACAAAGACTTTCTCCTCCGAACAATTTGAGAGTAAATTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp CTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCGCTGTCCTGTTTTCGTaGTCACAGACATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LHLDYRNLYPQTKFYFLFAVLFS*SQTLSW
Trigger: CCAGCTCAATGTCTGTGACAACGAAAACAGGACAGC...GAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CTGCAGCCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACCATACAAAAGCAGCTTaGTTGCTACTGATATGTCCT +
Preference number: 5 (lower is better)
Translates to: LQPQLKDQHTSVENSQRYHTKAA*LLLICP
Trigger: AGGACATATCAGTAGCAACAAAGCTGCTTTTGTATG...GTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGGCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp TCTTCCTTCATAAGACCAGGGTTTGCTAACGACTTGTGGGAAGGTTTTGGAAGACATACAAAAGCAGCTTaGTTGCTACTGATATGTCCT +
Preference number: 5 (lower is better)
Translates to: SSFIRPGFANDLWEGFGRHTKAA*LLLICP
Trigger: AGGACATATCAGTAGCAACAAAGCTGCTTTTGTATG...TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCCTGGTCTTATGAAGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp GTGATTCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCGGGTTTGCTAACGACTaGTGGGAAGGTTTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: VILYLPLVLILMRTSYHFGFAND*WEGFGR
Trigger: TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCC...GAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGACTGTCTTCTCTTTATaGTCAGCCTTGTTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: NANITSNRANQNCRVTGKTVFSL*SALLWA
Trigger: TGCCCACAACAAGGCTGACAATAAAGAGAAGACAGT...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS GCA 90 bp TGGGCAACCATTACTCTAGACTTCTCAGTTGCACATTGTCTTAGTTaGAAGCACATACCATTACGACAACCTGTACATATTCTCTTGATG +
Preference number: 5 (lower is better)
Translates to: WATITLDFSVAHCLS*KHIPLRQPVHILLM
Trigger: CATCAAGAGAATATGTACAGGTTGTCGTAATGGTATGTGCTTGCAACTAAGACAATGTGCAACTGAGAAGTCTAGAGTAATGGTTGCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675936.1
CDS GCA 90 bp TGGGCAACCATTACTCTAGACTTCTCAGTTGCACATTGTCTTAGTTaGAAGCACATACCATTACGACAACCTTCTTTGAGTTCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: WATITLDFSVAHCLS*KHIPLRQPSLSSLV
Trigger: AACTAGAGAACTCAAAGAAGGTTGTCGTAATGGTATGTGCTTGCAACTAAGACAATGTGCAACTGAGAAGTCTAGAGTAATGGTTGCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CAA 90 bp TTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTGCTGTCCTGTTTTCGTaGTCACAGACATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: FILTIGISILKQSSISCSAVLFS*SQTLSW
Trigger: CCAGCTCAATGTCTGTGACAACGAAAACAGGACAGC...AGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGACAAAAGCAGCTTTGTaGCTACTGATATGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: PQLKDQHTSVENSQRYSQTKAAL*LLICPH
Trigger: ATGAGGACATATCAGTAGCAACAAAGCTGCTTTTGT...CTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CTGCAGCCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTTCTTAGTATCAAAATaGAGGTCTTCGTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: LQPQLKDQHTSVENSQRYFLVSK*RSSSSE
Trigger: CTCAGATGACGAAGACCTCAATTTTGATACTAAGAA...GTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGGCTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGACTTGTGGGAAGGTTTaGGAAGAAGGTCAGGTGATT +
Preference number: 5 (lower is better)
Translates to: LDYRNLYPQTKFYFLFSQTCGKV*EEGQVI
Trigger: AATCACCTGACCTTCTTCCAAAACCTTCCCACAAGT...CTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATGGGTTTGCTAACGACTaGTGGGAAGGTTTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: QLKDQHTSVENSQRYSQNGFAND*WEGFGR
Trigger: TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCC...ATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp ATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACTTCCATCTCCAGTGTTaGGAGACTCAGTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: ILTIGISILKQSSISCSHFHLQC*ETQFKL
Trigger: CAGCTTGAACTGAGTCTCCAAACACTGGAGATGGAA...GTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676420.1
CDS-3UTR CAA 90 bp CTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGTGCCAAGCGTCATTTCGCTCTaGAACGACCTGATTCAAATT +
Preference number: 5 (lower is better)
Translates to: LSESLSSNKVLFPVLTVPSVISL*NDLIQI
Trigger: AATTTGAATCAGGTCGTTCAAGAGCGAAATGACGCT...TGGCACTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676420.1
CDS-3UTR CAA 90 bp TTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCTGTTCTCGAGAAAGTaGCCTCTGAGCGTCATTTCG +
Preference number: 5 (lower is better)
Translates to: FILTIGISILKQSSISCSLFSRK*PLSVIS
Trigger: CGAAATGACGCTCAGAGGCAACTTTCTCGAGAACAG...AGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676420.1
CDS-3UTR CAA 90 bp CTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCATCAACACCCGGTTaGCCAGAAAGCCTGAATTAC +
Preference number: 5 (lower is better)
Translates to: LHLDYRNLYPQTKFYFLFSSTPG*PESLNY
Trigger: GTAATTCAGGCTTTCTGGCAAACCGGGTGTTGATGA...GAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675846.1
CDS-3UTR CAA 90 bp CTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGTGCCACATACAAAAGCAGCTTaGTTGCTACTGATATGTCCT +
Preference number: 5 (lower is better)
Translates to: LSESLSSNKVLFPVLTVPHTKAA*LLLICP
Trigger: AGGACATATCAGTAGCAACAAAGCTGCTTTTGTATG...TGGCACTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp GGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGGTAACCACAACTTCATCTaGACTATCGGAATCTCTATC +
Preference number: 5 (lower is better)
Translates to: GSTYFCGKFSEILSESQGNHNFI*TIGISI
Trigger: GATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT...ACCTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp ACAACTAAATACAAGCCATGGATTAGAATGGGATCCTTTTGCTATAAAGGACATGGGTTTGCTAACGACTaGTGGGAAGGTTTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: TTKYKPWIRMGSFCYKGHGFAND*WEGFGR
Trigger: TCTTCCAAAACCTTCCCACAAGTCGTTAGCAAACCC...ATGTCCTTTATAGCAAAAGGATCCCATTCTAATCCATGGCTTGTATTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp CCCCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGCACCATCATGTATGTTaGCTGATACTTCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: PQLKDQHTSVENSQRYSQHHHVC*LILPFH
Trigger: ATGAAATGGAAGTATCAGCAAACATACATGATGGTG...CTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676420.1
CDS-3UTR CAA 90 bp AAAATAACATTACAGAGGAGAAATTCAGCAGATACCACTGTTAGTGATCAATGCTTCCATCTCCAGTGTTaGGAGACTCAGTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: KITLQRRNSADTTVSDQCFHLQC*ETQFKL
Trigger: CAGCTTGAACTGAGTCTCCAAACACTGGAGATGGAA...GCATTGATCACTAACAGTGGTATCTGCTGAATTTCTCCTCTGTAATGTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp GAAATTCAGCAGATACCACTGTTAGTGATCAATGCTAACATTACCAGTAACAGGAGCGTCATTTCGCTCTaGAACGACCTGATTCAAATT +
Preference number: 5 (lower is better)
Translates to: EIQQIPLLVINANITSNRSVISL*NDLIQI
Trigger: AATTTGAATCAGGTCGTTCAAGAGCGAAATGACGCT...CCTGTTACTGGTAATGTTAGCATTGATCACTAACAGTGGTATCTGCTGAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGCTTTTCACTCTCAGCTaGAAGTTTTTGCACAATAGC +
Preference number: 5 (lower is better)
Translates to: NANITSNRANQNCRVTGKLFTLS*KFLHNS
Trigger: GCTATTGTGCAAAAACTTCAAGCTGAGAGTGAAAAG...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTATCTCCATGCTATTATTaGAAGCCCGTGGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: ILIEINQGVVLQETCLELSPCYY*KPVDLR
Trigger: CCTCAAATCCACGGGCTTCAAATAATAGCATGGAGA...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CAA 90 bp ATTCATAGAAGGTACGCTCTCTGGAATACTTCTAGGTTGAGAATTCTTCGCTCTCATCGTTATTGTTCTTaGTGGGTGATCAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: IHRRYALWNTSRLRILRSHRYCS*WVISLF
Trigger: GAAAAGACTGATCACCCACAAAGAACAATAACGATG...AGAGCGAAGAATTCTCAACCTAGAAGTATTCCAGAGAGCGTACCTTCTATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CAA 90 bp AAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGACAAAAGCAGCTTTGTaGCTACTGATATGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: KDQHTSVENSQRYSQNPKTKAAL*LLICPH
Trigger: ATGAGGACATATCAGTAGCAACAAAGCTGCTTTTGT...CTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp GTGATTCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCAACCACAACTTCATCTaGACTATCGGAATCTCTATC +
Preference number: 5 (lower is better)
Translates to: VILYLPLVLILMRTSYHFNHNFI*TIGISI
Trigger: GATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT...GAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGAATCAC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAGAACCACAACTTCATCTaGACTATCGGAATCTCTATC +
Preference number: 5 (lower is better)
Translates to: LDYRNLYPQTKFYFLFSQNHNFI*TIGISI
Trigger: GATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT...CTGTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp TTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTACTTGTGGGAAGGTTTaGGAAGAAGGTCAGGTGATT +
Preference number: 5 (lower is better)
Translates to: FILTIGISILKQSSISCSTCGKV*EEGQVI
Trigger: AATCACCTGACCTTCTTCCAAAACCTTCCCACAAGT...AGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGCACCATCATGTATGTTaGCTGATACTTCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: NANITSNRANQNCRVTGKHHHVC*LILPFH
Trigger: ATGAAATGGAAGTATCAGCAAACATACATGATGGTG...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp GGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATCCCAAGGTCACCATCATGTATGTTaGCTGATACTTCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: GSTYFCGKFSEILSESQGHHHVC*LILPFH
Trigger: ATGAAATGGAAGTATCAGCAAACATACATGATGGTG...ACCTTGGGATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676420.1
CDS-3UTR CAA 90 bp GAAATTCAGCAGATACCACTGTTAGTGATCAATGCTAACATTACCAGTAACAGGCTCCTCTTGAAGAATTaGGTTCTTTGTATCCAGATG +
Preference number: 5 (lower is better)
Translates to: EIQQIPLLVINANITSNRLLLKN*VLCIQM
Trigger: CATCTGGATACAAAGAACCAAATTCTTCAAGAGGAG...CCTGTTACTGGTAATGTTAGCATTGATCACTAACAGTGGTATCTGCTGAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR CAA 90 bp AATGCTAACATTACCAGTAACAGGGCAAATCAAAACTGTAGGGTCACAGGTAAGTCAGCAGCAGCTTCTTaGAGTTCTCTAGTTATATTT +
Preference number: 5 (lower is better)
Translates to: NANITSNRANQNCRVTGKSAAAS*SSLVIF
Trigger: AAATATAACTAGAGAACTCAAAGAAGCTGCTGCTGA...CTTACCTGTGACCCTACAGTTTTGATTTGCCCTGTTACTGGTAATGTTAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR CAA 90 bp GAAATTCAGCAGATACCACTGTTAGTGATCAATGCTAACATTACCAGTAACAGGAAGCAAATGAATAAATaGAGGGTTCGATGGGGAGTA +
Preference number: 5 (lower is better)
Translates to: EIQQIPLLVINANITSNRKQMNK*RVRWGV
Trigger: TACTCCCCATCGAACCCTCAATTTATTCATTTGCTT...CCTGTTACTGGTAATGTTAGCATTGATCACTAACAGTGGTATCTGCTGAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR CAA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTATGGAATACTTCTAGGTaGAGAATTCTTCGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: ILIEINQGVVLQETCLELWNTSR*RILRSQ
Trigger: CTGAGAGCGAAGAATTCTCAACCTAGAAGTATTCCA...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CAA 90 bp CTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCACAAAAGCAGCTTTGTaGCTACTGATATGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: LHLDYRNLYPQTKFYFLFTKAAL*LLICPH
Trigger: ATGAGGACATATCAGTAGCAACAAAGCTGCTTTTGT...GAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CACCATGAAACCCAATTGAGGGACATTCTTATATTACCAGACTTTACTCTTCAACATACAAAAGCAGCTTaGTTGCTACTGATATGTCCT +
Preference number: 5 (lower is better)
Translates to: HHETQLRDILILPDFTLQHTKAA*LLLICP
Trigger: AGGACATATCAGTAGCAACAAAGCTGCTTTTGTATG...TTGAAGAGTAAAGTCTGGTAATATAAGAATGTCCCTCAATTGGGTTTCATGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp CCAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATTCTTAGTATCAAAATaGAGGTCTTCGTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: PAKGSTYFCGKFSEILSEFLVSK*RSSSSE
Trigger: CTCAGATGACGAAGACCTCAATTTTGATACTAAGAA...TTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CAGCAATTTACTCTCAAATTGTTCGGAGGAGAAAGTCTTTGTACTAAAACTTCGAACCACAACTTCATCTaGACTATCGGAATCTCTATC +
Preference number: 5 (lower is better)
Translates to: QQFTLKLFGGESLCTKTSNHNFI*TIGISI
Trigger: GATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT...CGAAGTTTTAGTACAAAGACTTTCTCCTCCGAACAATTTGAGAGTAAATTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp ATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTCCTGTTCTCACAACCACAACTTCATCTaGACTATCGGAATCTCTATC +
Preference number: 5 (lower is better)
Translates to: ILTIGISILKQSSISCSHNHNFI*TIGISI
Trigger: GATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT...GTGAGAACAGGAAATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp GTGATTCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCCACCATCATGTATGTTaGCTGATACTTCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: VILYLPLVLILMRTSYHFHHHVC*LILPFH
Trigger: ATGAAATGGAAGTATCAGCAAACATACATGATGGTG...GAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGAATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676420.1
CDS-3UTR CAA 90 bp AGGATAAGATTATTGTTGCTTTATCACTCTTACCTCCTGGAAAATTGCATCCTATTACCTCCTGGAAAATaGCATCCTATTCCCCCAATT +
Preference number: 5 (lower is better)
Translates to: RIRLLLLYHSYLLENCILLPPGK*HPIPPI
Trigger: AATTGGGGGAATAGGATGCAATTTTCCAGGAGGTAA...TAGGATGCAATTTTCCAGGAGGTAAGAGTGATAAAGCAACAATAATCTTATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CAA 90 bp ATTCTAATTGAAATAAACCAGGGGGTTGTGTTACAGGAGACTTGTCTTGAGTTATCCTTCTGGCTTCTATaGTTGCATTTAGAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: ILIEINQGVVLQETCLELSFWLL*LHLEKC
Trigger: GCACTTTTCTAAATGCAACAATAGAAGCCAGAAGGA...TAACTCAAGACAAGTCTCCTGTAACACAACCCCCTGGTTTATTTCAATTAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CAA 90 bp CGTTATTGTTCTTTGTGGGTGATCAGTCTTTTCTCTCTCACTATTATTAGAATCTGGAATACTTCTAGGTaGAGAATTCTTCGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: RYCSLWVISLFSLTIIRIWNTSR*RILRSQ
Trigger: CTGAGAGCGAAGAATTCTCAACCTAGAAGTATTCCA...GATTCTAATAATAGTGAGAGAGAAAAGACTGATCACCCACAAAGAACAATAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CAA 90 bp AAAATAACATTACAGAGGAGAAATTCAGCAGATACCACTGTTAGTGATCAATGCACAAAAGCAGCTTTGTaGCTACTGATATGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: KITLQRRNSADTTVSDQCTKAAL*LLICPH
Trigger: ATGAGGACATATCAGTAGCAACAAAGCTGCTTTTGT...GCATTGATCACTAACAGTGGTATCTGCTGAATTTCTCCTCTGTAATGTTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp TCTATATCTTCCTCTTGTCCTAATCCTAATGCGGACATCATATCACTTCTATTACATACAAAAGCAGCTTaGTTGCTACTGATATGTCCT +
Preference number: 5 (lower is better)
Translates to: SISSSCPNPNADIISLLLHTKAA*LLLICP
Trigger: AGGACATATCAGTAGCAACAAAGCTGCTTTTGTATG...TAATAGAAGTGATATGATGTCCGCATTAGGATTAGGACAAGAGGAAGATATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp CAGCTAAAGGATCAACATACTTCTGTGGAAAATTCTCAGAGATACTCTCAGAATTTCTTAGTATCAAAATaGAGGTCTTCGTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: QLKDQHTSVENSQRYSQNFLVSK*RSSSSE
Trigger: CTCAGATGACGAAGACCTCAATTTTGATACTAAGAA...ATTCTGAGAGTATCTCTGAGAATTTTCCACAGAAGTATGTTGATCCTTTAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS-3UTR CAA 90 bp ACAACTAAATACAAGCCATGGATTAGAATGGGATCCTTTTGCTATAAAGGACATCTCAGCTTGAAGTTTTaGCACAATAGCATGAAACTG +
Preference number: 5 (lower is better)
Translates to: TTKYKPWIRMGSFCYKGHLSLKF*HNSMKL
Trigger: CAGTTTCATGCTATTGTGCAAAAACTTCAAGCTGAG...ATGTCCTTTATAGCAAAAGGATCCCATTCTAATCCATGGCTTGTATTTAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp ACAACTAAATACAAGCCATGGATTAGAATGGGATCCTTTTGCTATAAAGGACATCTCCTCTTGAAGAATTaGGTTCTTTGTATCCAGATG +
Preference number: 5 (lower is better)
Translates to: TTKYKPWIRMGSFCYKGHLLLKN*VLCIQM
Trigger: CATCTGGATACAAAGAACCAAATTCTTCAAGAGGAG...ATGTCCTTTATAGCAAAAGGATCCCATTCTAATCCATGGCTTGTATTTAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR CAA 90 bp CAGCAATTTACTCTCAAATTGTTCGGAGGAGAAAGTCTTTGTACTAAAACTTCGTCAGCAGCAGCTTCTTaGAGTTCTCTAGTTATATTT +
Preference number: 5 (lower is better)
Translates to: QQFTLKLFGGESLCTKTSSAAAS*SSLVIF
Trigger: AAATATAACTAGAGAACTCAAAGAAGCTGCTGCTGA...CGAAGTTTTAGTACAAAGACTTTCTCCTCCGAACAATTTGAGAGTAAATTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR CAA 90 bp ACAACTAAATACAAGCCATGGATTAGAATGGGATCCTTTTGCTATAAAGGACATAAGCAAATGAATAAATaGAGGGTTCGATGGGGAGTA +
Preference number: 5 (lower is better)
Translates to: TTKYKPWIRMGSFCYKGHKQMNK*RVRWGV
Trigger: TACTCCCCATCGAACCCTCAATTTATTCATTTGCTT...ATGTCCTTTATAGCAAAAGGATCCCATTCTAATCCATGGCTTGTATTTAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376087.5
ENST00000676280.1
CDS-3UTR CAA 90 bp GACTTGAATTTCCTATTTATCCTGTTTTATAGGGCCTCTTGTATCACTAGATTCTGGGTCATCATTCCTTaGCACATTCTAGACATTACT +
Preference number: 5 (lower is better)
Translates to: DLNFLFILFYRASCITRFWVIIP*HILDIT
Trigger: AGTAATGTCTAGAATGTGCAAAGGAATGATGACCCA...GAATCTAGTGATACAAGAGGCCCTATAAAACAGGATAAATAGGAAATTCAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674670.1
ENST00000675439.1
CDS-3UTR CAA 90 bp AAAATAACATTACAGAGGAGAAATTCAGCAGATACCACTGTTAGTGATCAATGCTTCTTAGTATCAAAATaGAGGTCTTCGTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: KITLQRRNSADTTVSDQCFLVSK*RSSSSE
Trigger: CTCAGATGACGAAGACCTCAATTTTGATACTAAGAA...GCATTGATCACTAACAGTGGTATCTGCTGAATTTCTCCTCTGTAATGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376087.5
CDS-3UTR CAA 90 bp AACCACAACTTCATCTTGACTATCGGAATCTCTATCCTCAAACAAAGTTCTATTTTCTTAGTATCAAAATaGAGGTCTTCGTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: NHNFILTIGISILKQSSIFLVSK*RSSSSE
Trigger: CTCAGATGACGAAGACCTCAATTTTGATACTAAGAA...AATAGAACTTTGTTTGAGGATAGAGATTCCGATAGTCAAGATGAAGTTGTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS GCA 72 bp CTATCGTTCAAGCCATTCTTCCTGAGCAAAAGGATCTaGTGCACTTTCGCCACATTACCCGCGCTGGCAGCT +
Preference number: 6 (lower is better)
Translates to: LSFKPFFLSKRI*CTFATLPALAA
Trigger: AGCTGCCAGCGCGGGTAATGTGGCGAAAGTGCAGCAGATCCTTTTGCTCAGGAAGAATGGCTTGAACGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376087.5
ENST00000436985.7
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676420.1
CDS CCA 72 bp AAGTTCAGAGAGGTCGGAGTAAGCTGGGGATGTACCTaGAAGTTGGTTCAGGCTATGCTACTGCCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: KFREVGVSWGCT*KLVQAMLLPPQ
Trigger: CTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGGTACATCCCCAGCTTACTCCGACCTCTCTGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674670.1
CDS CCA 72 bp GACGGAGTTGTAGAAGTAGACCACCCTGTTGCCTTCTaGAAGTTGGTTCAGGCTATGCTACTGCCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: DGVVEVDHPVAF*KLVQAMLLPPQ
Trigger: CTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGAAGGCAACAGGGTGGTCTACTTCTACAACTCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675439.1
CDS CAA 72 bp AGAGAGGTCGGAGTAAGCTGGGGATGTACCTGGAAGTaGGTTCAGGCTATGCTACTGCCTCCTCAGTTAGAG +
Preference number: 6 (lower is better)
Translates to: REVGVSWGCTWK*VQAMLLPPQLE
Trigger: CTCTAACTGAGGAGGCAGTAGCATAGCCTGAACCAACTTCCAGGTACATCCCCAGCTTACTCCGACCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674670.1
CDS GCA 72 bp ATCAGGAGACGGAGTTGTAGAAGTAGACCACCCTGTTaGCTTCTGGAAGTTGGTTCAGGCTATGCTACTGCC +
Preference number: 6 (lower is better)
Translates to: IRRRSCRSRPPC*LLEVGSGYATA
Trigger: GGCAGTAGCATAGCCTGAACCAACTTCCAGAAGGCAACAGGGTGGTCTACTTCTACAACTCCGTCTCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675439.1
CDS CCA 72 bp ATCTGGTCCAGGAAGTTCAGAGAGGTCGGAGTAAGCTaGGGATGTACCTGGAAGTTGGTTCAGGCTATGCTA +
Preference number: 6 (lower is better)
Translates to: IWSRKFREVGVS*GCTWKLVQAML
Trigger: TAGCATAGCCTGAACCAACTTCCAGGTACATCCCCAGCTTACTCCGACCTCTCTGAACTTCCTGGACCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674670.1
CDS TCA 72 bp CGTCTGTGCCCATCCACTATAGTCAGGGCTCCATGGTaGCCATTTATTGAAATGGCTGCTTGTCAAAGTCAC +
Preference number: 6 (lower is better)
Translates to: RLCPSTIVRAPW*PFIEMAACQSH
Trigger: GTGACTTTGACAAGCAGCCATTTCAATAAATGGTCACCATGGAGCCCTGACTATAGTGGATGGGCACAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490015.1
CDS TCA 72 bp GAGAAAAGCTGGAGCTCTTTGGGTGGGAAAGCGGTATaGATCTACGGATCCCAGCTCTGGTTGATTTCTGAT +
Preference number: 6 (lower is better)
Translates to: EKSWSSLGGKAV*IYGSQLWLISD
Trigger: ATCAGAAATCAACCAGAGCTGGGATCCGTAGATTCATACCGCTTTCCCACCCAAAGAGCTCCAGCTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675116.1
CDS CAA 72 bp TGGCATCTATTGCAGGTCTGTCCTGGAAGTGAGACATaGGTCAGTCATCAGAACATAGTCATGAGGGGTTTC +
Preference number: 6 (lower is better)
Translates to: WHLLQVCPGSET*VSHQNIVMRGF
Trigger: GAAACCCCTCATGACTATGTTCTGATGACTGACCAATGTCTCACTTCCAGGACAGACCTGCAATAGATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS CAA 90 bp ATTATCCAGTGGCATCTATTGCAGGTCTGTCCTGGAAGTGAGACATaGGTCAGTCATCAGAACATAGTCATGAGGGGTTTCATCAGAAGG +
Preference number: 6 (lower is better)
Translates to: IIQWHLLQVCPGSET*VSHQNIVMRGFIRR
Trigger: CCTTCTGATGAAACCCCTCATGACTATGTTCTGATGACTGACCAATGTCTCACTTCCAGGACAGACCTGCAATAGATGCCACTGGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS CAA 90 bp ACATTTGTCTCAGGTCAGCAGAGGGATGACTTTGAGTTCTGTCCTTaGTCCTGCACCAGTCTATCTCAGCATTATCCAGTGGCATCTATT +
Preference number: 6 (lower is better)
Translates to: TFVSGQQRDDFEFCP*SCTSLSQHYPVASI
Trigger: AATAGATGCCACTGGATAATGCTGAGATAGACTGGTGCAGGACAAAGGACAGAACTCAAAGTCATCCCTCTGCTGACCTGAGACAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445828.5
CDS TCA 72 bp TGTTCATCTTGTCTCTATCGTTCAAGCCATTCTTCCTaGGCAAAAGGATCTGCTGCACTTTCGCCACATTAC +
Preference number: 6 (lower is better)
Translates to: CSSCLYRSSHSS*AKGSAALSPHY
Trigger: GTAATGTGGCGAAAGTGCAGCAGATCCTTTTGCTCAGGAAGAATGGCTTGAACGATAGAGACAAGATGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376087.5
ENST00000436985.7
ENST00000674697.1
ENST00000675187.1
ENST00000675846.1
ENST00000676299.1
ENST00000676361.1
ENST00000676420.1
CDS TCA 72 bp GAATCCAACAGCACATCACAAAGTAATAATTCACCATaGTCAAGTGGGTTTCATTTCAAGGATGCAGGGATG +
Preference number: 6 (lower is better)
Translates to: ESNSTSQSNNSP*SSGFHFKDAGM
Trigger: CATCCCTGCATCCTTGAAATGAAACCCACTTGATCATGGTGAATTATTACTTTGTGATGTGCTGTTGGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466890.1