RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD23 (Homo sapiens)

Ensembl gene IDs: ENSG00000163126

Ensembl transcript IDs: ENST00000318357.9, ENST00000331001.2, ENST00000418232.5, ENST00000462692.1, ENST00000476975.5, ENST00000482175.5

Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATaGGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGG +
Preference number: 1 (lower is better)
Translates to: VEWATSNPQCPGASP*EPPAGNGVPGRPER
Trigger: CCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR TCA 90 bp CCTTGTGGTCCTCTGCTCCAGCCCTGGGAGGGAACGCGGCTCCCCTaGCACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCTGGGCCC +
Preference number: 1 (lower is better)
Translates to: PCGPLLQPWEGTRLP*HSKPGRPLSLPAGP
Trigger: GGGCCCAGCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCGTTCCCTCCCAGGGCTGGAGCAGAGGACCACAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR TCA 90 bp TTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTaGGCGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGC +
Preference number: 1 (lower is better)
Translates to: FPMRAASRQRCARPA*AGPVHSGCEASLKC
Trigger: GCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 90 bp CCCTGGGTGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTaGCCCTCACTCTCCTCCCCTTCCTGGCCCTCATCTGGACCCGCG +
Preference number: 1 (lower is better)
Translates to: PWVAPAWDCSLKARS*PSLSSPSWPSSGPA
Trigger: CGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAGTGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR GCA 90 bp TCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTaGACGCTGGCTGTCGCCACAGGGCAGGAGCTTCCTCTGCTTCCC +
Preference number: 1 (lower is better)
Translates to: SMVLNACFAMAPASG*TLAVATGQELPLLP
Trigger: GGGAAGCAGAGGAAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418232.5
3UTR CCA 90 bp CAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCAGTACACAGTaGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCATCAGTCT +
Preference number: 1 (lower is better)
Translates to: QATVCQAGLSGASTQ*VRGFSQMRAPAHQS
Trigger: AGACTGATGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 90 bp CTTCTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTaGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTGCTCATGGA +
Preference number: 1 (lower is better)
Translates to: LLHGLERLLRHGTSV*VHAGCRHRAGAAHG
Trigger: TCCATGAGCAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR CCA 90 bp CTTCTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTaGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTTCCTCTGCT +
Preference number: 1 (lower is better)
Translates to: LLHGLERLLRHGTSV*VHAGCRHRAGASSA
Trigger: AGCAGAGGAAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418232.5
3UTR CCA 90 bp CAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTaGGTGCAGCTGCAGCGTTCCAGGCAAGAGCTCAAGCTCCAGTAC +
Preference number: 1 (lower is better)
Translates to: QSSSVSWPPRWDQAG*VQLQRSRQELKLQY
Trigger: GTACTGGAGCTTGAGCTCTTGCCTGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 90 bp TGCTCCCTTAAGGCTCGTTCTTGGCCCTCACTCTCCTCCCCTTCCTaGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGTCCTCT +
Preference number: 1 (lower is better)
Translates to: CSLKARSWPSLSSPS*PSSGPALSAALWSS
Trigger: AGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAGTGAGGGCCAAGAACGAGCCTTAAGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR TCA 90 bp CCTAGTGGGTCCTGGACTTCTGTTGCTGTGGGGCCTCAAACCTGTTaGGTAGCCACCTCAGATGACCAGAACCCACCTCCAGAGTTCCTA +
Preference number: 1 (lower is better)
Translates to: PSGSWTSVAVGPQTC*VATSDDQNPPPEFL
Trigger: TAGGAACTCTGGAGGTGGGTTCTGGTCATCTGAGGTGGCTACTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGACCCACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR TCA 90 bp AGGTGTCCTCATTTTCTAGATGAGGAGTTGTCTTCTCCATGGTCTTaGACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGG +
Preference number: 1 (lower is better)
Translates to: RCPHFLDEELSSPWS*TPASPWHQRLGARW
Trigger: CCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAGACAACTCCTCATCTAGAAAATGAGGACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 90 bp GCAGGAGCTGCTCATGGAAAGGTGTGTGCCCCTAGTGTGCAGCACTaGTCAGCTTTTCCACATAGTAACAACAGCCTTGTTCTGGGCCTG +
Preference number: 1 (lower is better)
Translates to: AGAAHGKVCAPSVQH*SAFPHSNNSLVLGL
Trigger: CAGGCCCAGAACAAGGCTGTTGTTACTATGTGGAAAAGCTGACCAGTGCTGCACACTAGGGGCACACACCTTTCCATGAGCAGCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR CCA 90 bp CATGTGGTTCTCAGTTTAGGGCAGAGCTTCTTAAGATTCACTTTCTaGCGTTTAGGGGCCCAGCCCCACCAGCAGTACAGGCCTACACCA +
Preference number: 1 (lower is better)
Translates to: HVVLSLGQSFLRFTF*RLGAQPHQQYRPTP
Trigger: TGGTGTAGGCCTGTACTGCTGGTGGGGCTGGGCCCCTAAACGCCAGAAAGTGAATCTTAAGAAGCTCTGCCCTAAACTGAGAACCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR-3UTR CCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCCTCTCCTCCCCTTCCTaGCCCTCATCTGGACCCGCG +
Preference number: 2 (lower is better)
Translates to: PHESRQQATVCQAGLSGALSSPS*PSSGPA
Trigger: CGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAG...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCGGGCACAGGATGGAATaGTGGCAGTGCGAAAGGCGC +
Preference number: 2 (lower is better)
Translates to: PHESRQQATVCQAGLSGAGHRME*WQCERR
Trigger: GCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCC...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCCACACAGACTGGCCCTaGAGAGAGCAAGGCAAGCCC +
Preference number: 2 (lower is better)
Translates to: PHESRQQATVCQAGLSGAHTDWP*REQGKP
Trigger: GGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTG...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCCCTCTGCTCCAGCCCTaGGAGGGAACGCGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: LSGPQAIPSAQALPHESRPLLQP*EGTRLP
Trigger: GGGGAGCCGCGTTCCCTCCCAGGGCTGGAGCAGAGG...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCCTTAAGGCTCGTTCTTaGCCCTCACTCTCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: PHESRQQATVCQAGLSGALKARS*PSLSSP
Trigger: AGGGGAGGAGAGTGAGGGCCAAGAACGAGCCTTAAG...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCCAACCTAGTGGGTCCTaGACTTCTGTTGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: PHESRQQATVCQAGLSGAQPSGS*TSVAVG
Trigger: CCCCACAGCAACAGAAGTCCAGGACCCACTAGGTTG...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCCACACAGACTGGCCCTaGAGAGAGCAAGGCAAGCCC +
Preference number: 2 (lower is better)
Translates to: SAQALPHESRQQATVCQAHTDWP*REQGKP
Trigger: GGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTG...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CGCGGCTCCCCTGACACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCTGGGCGGGCACAGGATGGAATaGTGGCAGTGCGAAAGGCGC +
Preference number: 2 (lower is better)
Translates to: RGSPDTRSQGGLSLCLLGGHRME*WQCERR
Trigger: GCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCC...GCCCAGCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGGGCGGGGCACAGGATaGAATGGTGGCAGTGCGAAA +
Preference number: 2 (lower is better)
Translates to: LRHGTSVWVHAGCRHRAGGRGTG*NGGSAK
Trigger: TTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCC...TCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCCTCTCCTCCCCTTCCTaGCCCTCATCTGGACCCGCG +
Preference number: 2 (lower is better)
Translates to: LSGPQAIPSAQALPHESRLSSPS*PSSGPA
Trigger: CGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAG...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp GTGCCAGGCCGGCCTGAGCGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCACTTGTACATCCTGGATaGCATCTGCCGGCCACGGGC +
Preference number: 2 (lower is better)
Translates to: VPGRPERGQYTVGARLLSLVHPG*HLPATG
Trigger: GCCCGTGGCCGGCAGATGCCATCCAGGATGTACAAG...TGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp GCAGGAGCTGCTCATGGAAAGGTGTGTGCCCCTAGTGTGCAGCACTGGTCAGCTCCTCTGCTCCAGCCCTaGGAGGGAACGCGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: AGAAHGKVCAPSVQHWSAPLLQP*EGTRLP
Trigger: GGGGAGCCGCGTTCCCTCCCAGGGCTGGAGCAGAGG...AGCTGACCAGTGCTGCACACTAGGGGCACACACCTTTCCATGAGCAGCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR-3UTR CCA 90 bp GGGTTACGGGCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCTCTCCTCCCCTTCCTaGCCCTCATCTGGACCCGCG +
Preference number: 2 (lower is better)
Translates to: GLRATAPRVEWATSNPQCLSSPS*PSSGPA
Trigger: CGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAG...GCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGCCCGTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGATGGGTGGCTCCAGCTTaGGACTGCTCCCTTAAGGCT +
Preference number: 2 (lower is better)
Translates to: LRHGTSVWVHAGCRHRAGWVAPA*DCSLKA
Trigger: AGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCA...TCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAAGCTCCTCAGTGTCCTaGCCTCCCAGGTGGGATCAA +
Preference number: 2 (lower is better)
Translates to: LRHGTSVWVHAGCRHRAGSSSVS*PPRWDQ
Trigger: TTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCT...TCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCACACAGGATGGAATGGTaGCAGTGCGAAAGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPHRMEW*QCERRG
Trigger: GCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTG...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp GGGTTACGGGCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCACAGGATGGAATGGTaGCAGTGCGAAAGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: GLRATAPRVEWATSNPQCHRMEW*QCERRG
Trigger: GCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTG...GCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGCCCGTAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTTCTCTCTTTGCCTGCTaGGCCCGGTGCCGCTCTTCA +
Preference number: 2 (lower is better)
Translates to: LHGLERLLRHGTSVWVHASLFAC*ARCRSS
Trigger: TGAAGAGCGGCACCGGGCCCAGCAGGCAAAGAGAGA...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CCCTGGGTGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCATTCCTGGCCCTCATCTaGACCCGCGCTTTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: PWVAPAWDCSLKARSWPSFLALI*TRAFCC
Trigger: GCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA...TGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTTTCCTGGCCCTCATCTaGACCCGCGCTTTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: LHGLERLLRHGTSVWVHAFLALI*TRAFCC
Trigger: GCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp GCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTGCAAGCCCCCTAACCTaGGACAAGTGGACACTGAGG +
Preference number: 2 (lower is better)
Translates to: ATAPRVEWATSNPQCPGAASPLT*DKWTLR
Trigger: CCTCAGTGTCCACTTGTCCCAGGTTAGGGGGCTTGC...AGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTCCCACACACACAGACTaGCCCTGGAGAGAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: LHGLERLLRHGTSVWVHAPTHTD*PWREQG
Trigger: GCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGGG...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCAGCACCTTGTACATCCTaGATGGCATCTGCCGGCCAC +
Preference number: 2 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPAPCTS*MASAGH
Trigger: GTGGCCGGCAGATGCCATCCAGGATGTACAAGGTGC...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CTTCTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACCCCACACACACAGACTaGCCCTGGAGAGAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: LLHGLERLLRHGTSVWVHPTHTD*PWREQG
Trigger: GCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGGG...GTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp GCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTCTGCATGGCCTGCCTTaGCTGCACCTTGTACATCCT +
Preference number: 2 (lower is better)
Translates to: ATAPRVEWATSNPQCPGALHGLP*LHLVHP
Trigger: AGGATGTACAAGGTGCAGCCAAGGCAGGCCATGCAG...AGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGCCCCAAGAGTTGAGTaGGCCACAAGCAATCCCCAG +
Preference number: 2 (lower is better)
Translates to: LGSELLSVLASQVGSSRVAPRVE*ATSNPQ
Trigger: CTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGC...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp GCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTGCTCATGTTAAGATTCACTTTCTaGCGTTTAGGGGCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: APASGCTLAVATGQELLMLRFTF*RLGAQP
Trigger: GGGCTGGGCCCCTAAACGCCAGAAAGTGAATCTTAA...CATGAGCAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR-3UTR CCA 90 bp GCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTCTAACCTGGGACAAGTaGACACTGAGGACTCCCAGA +
Preference number: 2 (lower is better)
Translates to: ATAPRVEWATSNPQCPGALTWDK*TLRTPR
Trigger: TCTGGGAGTCCTCAGTGTCCACTTGTCCCAGGTTAG...AGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCACTAACCTGGGACAAGTaGACACTGAGGACTCCCAGA +
Preference number: 2 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPLTWDK*TLRTPR
Trigger: TCTGGGAGTCCTCAGTGTCCACTTGTCCCAGGTTAG...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp ATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTCTGCATGGCCTGCCTTaGCTGCACCTTGTACATCCT +
Preference number: 2 (lower is better)
Translates to: MVLNACFAMAPASGCTLALHGLP*LHLVHP
Trigger: AGGATGTACAAGGTGCAGCCAAGGCAGGCCATGCAG...AGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp GCAGGAGCTGCTCATGGAAAGGTGTGTGCCCCTAGTGTGCAGCACTGGTCAGCTTGGGATCAAGCAGGGTaGGTGCAGCTGCAGCGTTCC +
Preference number: 2 (lower is better)
Translates to: AGAAHGKVCAPSVQHWSAWDQAG*VQLQRS
Trigger: GGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCA...AGCTGACCAGTGCTGCACACTAGGGGCACACACCTTTCCATGAGCAGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR-3UTR CCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCACTAACCTGGGACAAGTaGACACTGAGGACTCCCAGA +
Preference number: 2 (lower is better)
Translates to: RGQYTVGARLLSNARSSSLTWDK*TLRTPR
Trigger: TCTGGGAGTCCTCAGTGTCCACTTGTCCCAGGTTAG...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp ATAAGGGGACATAAGGGCCTCAGGCAAACTAGGGTTACGGGCCACTGCCCCAAGCCCACACACACAGACTaGCCCTGGAGAGAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: IRGHKGLRQTRVTGHCPKPTHTD*PWREQG
Trigger: GCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGGG...CTTGGGGCAGTGGCCCGTAACCCTAGTTTGCCTGAGGCCCTTATGTCCCCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp TGGGTCCTGGACTTCTGTTGCTGTGGGGCCTCAAACCTGTTGAGTAGCCACCTCCTTGTACATCCTGGATaGCATCTGCCGGCCACGGGC +
Preference number: 2 (lower is better)
Translates to: WVLDFCCCGASNLLSSHLLVHPG*HLPATG
Trigger: GCCCGTGGCCGGCAGATGCCATCCAGGATGTACAAG...GAGGTGGCTACTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CTTCTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACCTGCATGGCCTGCCTTaGCTGCACCTTGTACATCCT +
Preference number: 2 (lower is better)
Translates to: LLHGLERLLRHGTSVWVHLHGLP*LHLVHP
Trigger: AGGATGTACAAGGTGCAGCCAAGGCAGGCCATGCAG...GTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp GCAGGAGCTGCTCATGGAAAGGTGTGTGCCCCTAGTGTGCAGCACTGGTCAGCTCTTAAGGCTCGTTCTTaGCCCTCACTCTCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: AGAAHGKVCAPSVQHWSALKARS*PSLSSP
Trigger: AGGGGAGGAGAGTGAGGGCCAAGAACGAGCCTTAAG...AGCTGACCAGTGCTGCACACTAGGGGCACACACCTTTCCATGAGCAGCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR-3UTR CCA 90 bp TGGGTCCTGGACTTCTGTTGCTGTGGGGCCTCAAACCTGTTGAGTAGCCACCTCGCAAGCCCCCTAACCTaGGACAAGTGGACACTGAGG +
Preference number: 2 (lower is better)
Translates to: WVLDFCCCGASNLLSSHLASPLT*DKWTLR
Trigger: CCTCAGTGTCCACTTGTCCCAGGTTAGGGGGCTTGC...GAGGTGGCTACTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp TGGGTCCTGGACTTCTGTTGCTGTGGGGCCTCAAACCTGTTGAGTAGCCACCTCGCACCTTGTACATCCTaGATGGCATCTGCCGGCCAC +
Preference number: 2 (lower is better)
Translates to: WVLDFCCCGASNLLSSHLAPCTS*MASAGH
Trigger: GTGGCCGGCAGATGCCATCCAGGATGTACAAGGTGC...GAGGTGGCTACTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp ATAAGGGGACATAAGGGCCTCAGGCAAACTAGGGTTACGGGCCACTGCCCCAAGGCACCTTGTACATCCTaGATGGCATCTGCCGGCCAC +
Preference number: 2 (lower is better)
Translates to: IRGHKGLRQTRVTGHCPKAPCTS*MASAGH
Trigger: GTGGCCGGCAGATGCCATCCAGGATGTACAAGGTGC...CTTGGGGCAGTGGCCCGTAACCCTAGTTTGCCTGAGGCCCTTATGTCCCCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CTTCTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGGACTTCTGTTGCTGTaGGGCCTCAAACCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: LLHGLERLLRHGTSVWVHGLLLL*GLKPVE
Trigger: CTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCC...GTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp GCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTGCTCATGGACGAAAAGGAACCATaGCCAAATGCCTATCAATCA +
Preference number: 2 (lower is better)
Translates to: APASGCTLAVATGQELLMDEKEP*PNAYQS
Trigger: TGATTGATAGGCATTTGGCCATGGTTCCTTTTCGTC...CATGAGCAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR-3UTR CCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTCACAGGATGGAATGGTaGCAGTGCGAAAGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSHRMEW*QCERRG
Trigger: GCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTG...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTGGGCGGGGCACAGGATaGAATGGTGGCAGTGCGAAA +
Preference number: 2 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSGRGTG*NGGSAK
Trigger: TTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCC...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp GGAACCATGGCCAAATGCCTATCAATCAGCCCGGTACCTAATGTAACCCAGGACGGGCGGGGCACAGGATaGAATGGTGGCAGTGCGAAA +
Preference number: 2 (lower is better)
Translates to: GTMAKCLSISPVPNVTQDGRGTG*NGGSAK
Trigger: TTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCC...GTCCTGGGTTACATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR-3UTR CCA 90 bp ATAAGGGGACATAAGGGCCTCAGGCAAACTAGGGTTACGGGCCACTGCCCCAAGGGACTTCTGTTGCTGTaGGGCCTCAAACCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: IRGHKGLRQTRVTGHCPKGLLLL*GLKPVE
Trigger: CTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCC...CTTGGGGCAGTGGCCCGTAACCCTAGTTTGCCTGAGGCCCTTATGTCCCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CCA 90 bp GGAACCATGGCCAAATGCCTATCAATCAGCCCGGTACCTAATGTAACCCAGGACTCCTCTGCTTCCCTGTaGGCTGGGTTCAGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: GTMAKCLSISPVPNVTQDSSASL*AGFRAP
Trigger: AGGAGCTCTGAACCCAGCCCACAGGGAAGCAGAGGA...GTCCTGGGTTACATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR-3UTR CAA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCCGGACACTGCCAGGGTaGCTACTGACAGGAATGGGG +
Preference number: 3 (lower is better)
Translates to: PHESRQQATVCQAGLSGARTLPG*LLTGMG
Trigger: CCCCATTCCTGTCAGTAGCAACCCTGGCAGTGTCCG...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR TCA 72 bp AGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTaGGCGGGGCCAGTACACAGTGGGTGCGAGGCTTCT +
Preference number: 3 (lower is better)
Translates to: RAASRQRCARPA*AGPVHSGCEAS
Trigger: AGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR TCA 72 bp CCTCTGCTCCAGCCCTGGGAGGGAACGCGGCTCCCCTaGCACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: PLLQPWEGTRLP*HSKPGRPLSLP
Trigger: AGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCGTTCCCTCCCAGGGCTGGAGCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 72 bp GTGTGCCAGGCCGGCCTGAGCGGGGCCAGTACACAGTaGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: VCQAGLSGASTQ*VRGFSQMRAPA
Trigger: AGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 72 bp GGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTaGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: GLERLLRHGTSV*VHAGCRHRAGA
Trigger: AGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CAA 90 bp GTGCCAGGCCGGCCTGAGCGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCACCTGCATGGCCTGCCTaGGCTGCACCTTGTACATCC +
Preference number: 3 (lower is better)
Translates to: VPGRPERGQYTVGARLLSPAWPA*AAPCTS
Trigger: GGATGTACAAGGTGCAGCCAAGGCAGGCCATGCAGG...TGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CAA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGTCCTGGACTTCTGTaGCTGTGGGGCCTCAAACCT +
Preference number: 3 (lower is better)
Translates to: SAQALPHESRQQATVCQAGPGLL*LWGLKP
Trigger: AGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGACC...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CAA 90 bp TCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCGGTCCTGGACTTCTGTaGCTGTGGGGCCTCAAACCT +
Preference number: 3 (lower is better)
Translates to: SPWHQRLGARWLSPQGRSGPGLL*LWGLKP
Trigger: AGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGACC...GCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR GCA 72 bp TTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTaGACGCTGGCTGTCGCCACAGGGCAGGAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: LNACFAMAPASG*TLAVATGQELP
Trigger: AGGAAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418232.5
3UTR CCA 72 bp CCTGCATGGCCTGCCTTGGCTGCACCTTGTACATCCTaGATGGCATCTGCCGGCCACGGGCTGAGTCCCCAC +
Preference number: 3 (lower is better)
Translates to: PAWPALAAPCTS*MASAGHGLSPH
Trigger: GTGGGGACTCAGCCCGTGGCCGGCAGATGCCATCCAGGATGTACAAGGTGCAGCCAAGGCAGGCCATGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 72 bp CCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTaGCTGTCGCCACAGGGCAGGAGCTGCTCATGGAAA +
Preference number: 3 (lower is better)
Translates to: PASPWHQRLGAR*LSPQGRSCSWK
Trigger: TTTCCATGAGCAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR-3UTR CAA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCAGCGCTTTCTGCTGCCTaGTGGTCCTCTGCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPALSAA*WSSAPA
Trigger: GGCTGGAGCAGAGGACCACAAGGCAGCAGAAAGCGC...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CAA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGCGCTTTCTGCTGCCTaGTGGTCCTCTGCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: LHGLERLLRHGTSVWVHAALSAA*WSSAPA
Trigger: GGCTGGAGCAGAGGACCACAAGGCAGCAGAAAGCGC...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR TCA 72 bp AGGCAAACTAGGGTTACGGGCCACTGCCCCAAGAGTTaGGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGC +
Preference number: 3 (lower is better)
Translates to: RQTRVTGHCPKS*VGHKQSPVPRR
Trigger: GCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGCCCGTAACCCTAGTTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 72 bp ACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTaGGACAAGTGGACACTGAGGACTCCCAGACCCAGC +
Preference number: 3 (lower is better)
Translates to: TGPGESKASPLT*DKWTLRTPRPS
Trigger: GCTGGGTCTGGGAGTCCTCAGTGTCCACTTGTCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 72 bp TCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTaGGTGCAGCTGCAGCGTTCCAGGCAAGAGCTCAAG +
Preference number: 3 (lower is better)
Translates to: SVSWPPRWDQAG*VQLQRSRQELK
Trigger: CTTGAGCTCTTGCCTGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 72 bp AAACTAGGGTTACGGGCCACTGCCCCAAGAGTTGAGTaGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCC +
Preference number: 3 (lower is better)
Translates to: KLGLRATAPRVE*ATSNPQCPGAS
Trigger: GGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGCCCGTAACCCTAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR-3UTR CAA 90 bp TTTAGGGCAGAGCTTCTTAAGATTCACTTTCTGGCGTTTAGGGGCCCAGCCCCACCTGCATGGCCTGCCTaGGCTGCACCTTGTACATCC +
Preference number: 3 (lower is better)
Translates to: FRAELLKIHFLAFRGPAPPAWPA*AAPCTS
Trigger: GGATGTACAAGGTGCAGCCAAGGCAGGCCATGCAGG...TGGGGCTGGGCCCCTAAACGCCAGAAAGTGAATCTTAAGAAGCTCTGCCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR-3UTR CAA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTCTACACCAGTGTAATTaGAAACGTACAGACGGTGGA +
Preference number: 3 (lower is better)
Translates to: LHGLERLLRHGTSVWVHALHQCN*KRTDGG
Trigger: TCCACCGTCTGTACGTTTCAAATTACACTGGTGTAG...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR TCA 72 bp TCCTGGACTTCTGTTGCTGTGGGGCCTCAAACCTGTTaGGTAGCCACCTCAGATGACCAGAACCCACCTCCA +
Preference number: 3 (lower is better)
Translates to: SWTSVAVGPQTC*VATSDDQNPPP
Trigger: TGGAGGTGGGTTCTGGTCATCTGAGGTGGCTACTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 72 bp CTCAGTTTAGGGCAGAGCTTCTTAAGATTCACTTTCTaGCGTTTAGGGGCCCAGCCCCACCAGCAGTACAGG +
Preference number: 3 (lower is better)
Translates to: LSLGQSFLRFTF*RLGAQPHQQYR
Trigger: CCTGTACTGCTGGTGGGGCTGGGCCCCTAAACGCCAGAAAGTGAATCTTAAGAAGCTCTGCCCTAAACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR TCA 72 bp TGTGGGGCCTCAAACCTGTTGAGTAGCCACCTCAGATaGCCAGAACCCACCTCCAGAGTTCCTATGACCAAA +
Preference number: 3 (lower is better)
Translates to: CGASNLLSSHLR*PEPTSRVPMTK
Trigger: TTTGGTCATAGGAACTCTGGAGGTGGGTTCTGGTCATCTGAGGTGGCTACTCAACAGGTTTGAGGCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR TCA 72 bp CATTTTCTAGATGAGGAGTTGTCTTCTCCATGGTCTTaGACGCCTGCTTCGCCATGGCACCAGCGTCTGGGT +
Preference number: 3 (lower is better)
Translates to: HFLDEELSSPWS*TPASPWHQRLG
Trigger: ACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAGACAACTCCTCATCTAGAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
3UTR CCA 72 bp CTGAGAAGGCCCCCAAAGGTAGACGAAAAGGAACCATaGCCAAATGCCTATCAATCAGCCCGGTACCTAATG +
Preference number: 3 (lower is better)
Translates to: LRRPPKVDEKEP*PNAYQSARYLM
Trigger: CATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGTTCCTTTTCGTCTACCTTTGGGGGCCTTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
3UTR CCA 72 bp GCTCATGGAAAGGTGTGTGCCCCTAGTGTGCAGCACTaGTCAGCTTTTCCACATAGTAACAACAGCCTTGTT +
Preference number: 3 (lower is better)
Translates to: AHGKVCAPSVQH*SAFPHSNNSLV
Trigger: AACAAGGCTGTTGTTACTATGTGGAAAAGCTGACCAGTGCTGCACACTAGGGGCACACACCTTTCCATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR TCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCTTCTGCCAGGGCTGCTaGGGCGGCACAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PHESRQQATVCQAGLSGAFCQGC*GGTGQR
Trigger: TCTCTGGCCTGTGCCGCCTCAGCAGCCCTGGCAGAA...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCCACCGGGTGCGGGGATaGGCCACGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPWHQRLGARWLSPQGRSHRVRG*ATWACR
Trigger: CCTGCAGGCCCACGTGGCGCATCCCCGCACCCGGTG...GCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTCCAGGCAGTCGGGGTaGCGGGTGCGCACTGCCACG +
Preference number: 4 (lower is better)
Translates to: SPWHQRLGARWLSPQGRSSRQSG*RVRTAT
Trigger: CGTGGCAGTGCGCACCCGGCACCCCGACTGCCTGGA...GCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCATCCTGGATGGCATCTaGCGGCCACGGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PHESRQQATVCQAGLSGAILDGI*RPRAES
Trigger: GGACTCAGCCCGTGGCCGGCAGATGCCATCCAGGAT...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCCAGGGTGGGTGCAGCTaGAGCGTTCCAGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: PHESRQQATVCQAGLSGAQGGCS*SVPGKS
Trigger: GCTCTTGCCTGGAACGCTGCAGCTGCACCCACCCTG...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCTGTGCCAGGCCGGCCTaGGCGGGGCCAGTACACAGT +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQACARPA*AGPVHS
Trigger: ACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCACA...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp ACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGGTTCAGACAGGCCCAGTaGAAGGCGGTGCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TRGRGTGWNGGSAKGAAGFRQAQ*KAVRWS
Trigger: GCTCCACCGCACCGCCTTGCACTGGGCCTGTCTGAA...CCCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTCGGGGTGCCGGGTaGGCACTGCCACGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGTTEVQTRGRGTGWNGGSRGAG*ALPRAG
Trigger: CCCTGCACGTGGCAGTGCGCACCCGGCACCCCGACT...GCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTGCTCATGTCCAGGCAGTCGGGGTaGCGGGTGCGCACTGCCACG +
Preference number: 4 (lower is better)
Translates to: APASGCTLAVATGQELLMSRQSG*RVRTAT
Trigger: CGTGGCAGTGCGCACCCGGCACCCCGACTGCCTGGA...CATGAGCAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCTGCCGCACGGCCTCGTaGAGAGCCGTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQACRTAS*RAVSPS
Trigger: GGAAGGGGACACGGCTCTGCACGAGGCCGTGCGGCA...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTCCCGGATGCCGCGCTaGCAGTCTCGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPWHQRLGARWLSPQGRSSRMPR*QSRASC
Trigger: GCAGCTGGCTCGAGACTGGCAGCGCGGCATCCGGGA...GCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTGCTCATGGCAGGGCCTCCCGGATaGCGCGCTGCCAGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: APASGCTLAVATGQELLMAGPPG*RAASLE
Trigger: CTCGAGACTGGCAGCGCGGCATCCGGGAGGCCCTGC...CATGAGCAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp GGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCCAGGCATCCACCAGCTaGAGACAGGCCCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GADAGAGHRMEWWQCERRQASTS*RQARPL
Trigger: CAGGGGCCGGGCCTGTCTGCAGCTGGTGGATGCCTG...GCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGACCTCTGCTCCAGCCCTaGGAGGGAACGCGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRHGTSVWVHAGCRHRAGPLLQP*EGTRLP
Trigger: GGGGAGCCGCGTTCCCTCCCAGGGCTGGAGCAGAGG...TCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCCGTCTGGGTGCACGCTaGCTGTCGCCACAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQARLGAR*LSPQGR
Trigger: CCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACG...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCTTCTGCCAGGGCTGCTaGGGCGGCACAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQAFCQGC*GGTGQR
Trigger: TCTCTGGCCTGTGCCGCCTCAGCAGCCCTGGCAGAA...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp GCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCCTGCCGGCCACGGGCTaGGTCCCCACACACACAGAC +
Preference number: 4 (lower is better)
Translates to: AGTTEVQTRGRGTGWNGGLPATG*VPTHTD
Trigger: GTCTGTGTGTGTGGGGACTCAGCCCGTGGCCGGCAG...GCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp GTGCCAGGCCGGCCTGAGCGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCATGTGCCAGGCCGGCCTaGGCGGGGCCAGTACACAGT +
Preference number: 4 (lower is better)
Translates to: VPGRPERGQYTVGARLLSCARPA*AGPVHS
Trigger: ACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCACA...TGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGATGCCGCACGGCCTCGTaGAGAGCCGTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LRHGTSVWVHAGCRHRAGCRTAS*RAVSPS
Trigger: GGAAGGGGACACGGCTCTGCACGAGGCCGTGCGGCA...TCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAATGCGCCACGTGGGCCTaGAGGGCCTCCCGGATGCCG +
Preference number: 4 (lower is better)
Translates to: HKQSPVPRRFPMRAASRQCATWA*RASRMP
Trigger: CGGCATCCGGGAGGCCCTGCAGGCCCACGTGGCGCA...TTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTCTCCTCCCCTTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGGCGGTCAGCACCGGGTaGGGGGATGCGCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: LSSPSWPSSGPALSAALWAVSTG*GDAPRG
Trigger: CCCACGTGGCGCATCCCCGCACCCGGTGCTGACCGC...CCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCGCGGTCAGCACCGGGTaGGGGGATGCGCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: LSGPQAIPSAQALPHESRAVSTG*GDAPRG
Trigger: CCCACGTGGCGCATCCCCGCACCCGGTGCTGACCGC...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp AGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGGGAGGCCTCTCTCTTTaGCTGCTGGGCCCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: RCRRGGGAQDGMVAVRKAGGLSL*LLGPVP
Trigger: CGGCACCGGGCCCAGCAGGCAAAGAGAGAGGCCTCC...CGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGGTGCAAGGCGGTGCGGTaGAGCTTAACCAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: TRGRGTGWNGGSAKGAAGCKAVR*SLTRGS
Trigger: TGAGCCCCTGGTTAAGCTCCACCGCACCGCCTTGCA...CCCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331001.2
CDS-3UTR CCA 90 bp GACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGCACAGGATGGAATGGTaGCAGTGCGAAAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: DAGAGHRMEWWQCERRGGHRMEW*QCERRG
Trigger: GCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTG...CCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGGTGGGATCAAGCAGGGTaGGTGCAGCTGCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: TRGRGTGWNGGSAKGAAGWDQAG*VQLQRS
Trigger: GGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCA...CCCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp GGGAACGCGGCTCCCCTGACACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCGGGCGCCACACTCGATaGGGTGCTCCAGGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: GNAAPLTLEAREASLFACGRHTR*GAPGSR
Trigger: CCGACTGCCTGGAGCACCTCATCGAGTGTGGCGCCC...GCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCGTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGGACAAGTGGACACTaGGGACTCCCAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQAGTSGH*GLPDPA
Trigger: GGCTGGGTCTGGGAGTCCTCAGTGTCCACTTGTCCC...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CTGAGGGCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATCTGCCGGCCACGGGCTaGGTCCCCACACACACAGAC +
Preference number: 4 (lower is better)
Translates to: LRAGTTEVQTRGRGTGWNLPATG*VPTHTD
Trigger: GTCTGTGTGTGTGGGGACTCAGCCCGTGGCCGGCAG...ATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGCCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp ATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTTCCTCTGCCGGCCACGGGCTaGGTCCCCACACACACAGAC +
Preference number: 4 (lower is better)
Translates to: MAPASGCTLAVATGQELPLPATG*VPTHTD
Trigger: GTCTGTGTGTGTGGGGACTCAGCCCGTGGCCGGCAG...AGGAAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418232.5
CDS-3UTR TCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCAGTAGCCACCTCAGATaGCCAGAACCCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PHESRQQATVCQAGLSGASSHLR*PEPTSR
Trigger: TCTGGAGGTGGGTTCTGGTCATCTGAGGTGGCTACT...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCTCTTCTCCATGGTCTTaGACGCCTGCTTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: PHESRQQATVCQAGLSGASSPWS*TPASPW
Trigger: CCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAGA...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCAGTCGGGGTGCCGGGTaGGCACTGCCACGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSGPQAIPSAQALPHESRSRGAG*ALPRAG
Trigger: CCCTGCACGTGGCAGTGCGCACCCGGCACCCCGACT...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp AGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCTCCAGGCAGTCGGGGTaGCGGGTGCGCACTGCCACG +
Preference number: 4 (lower is better)
Translates to: SVLASQVGSSRVGAAAAFSRQSG*RVRTAT
Trigger: CGTGGCAGTGCGCACCCGGCACCCCGACTGCCTGGA...GAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp ACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGGCCCTTCCTTATCCTGTaGGTTCAGGTGGGCGCCACA +
Preference number: 4 (lower is better)
Translates to: TRGRGTGWNGGSAKGAAGPFLIL*VQVGAT
Trigger: TGTGGCGCCCACCTGAACGCACAGGATAAGGAAGGG...CCCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGACGCGGTCAGCACCGGGTaGGGGGATGCGCCACGTGGG +
Preference number: 4 (lower is better)
Translates to: PHTQTGPGESKASPLTWDAVSTG*GDAPRG
Trigger: CCCACGTGGCGCATCCCCGCACCCGGTGCTGACCGC...GTCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTGAGGGCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGAGGCCTCTCTCTTTaGCTGCTGGGCCCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LRAGTTEVQTRGRGTGWNGGLSL*LLGPVP
Trigger: CGGCACCGGGCCCAGCAGGCAAAGAGAGAGGCCTCC...ATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGCCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp ACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGGATGGTCTTGAACGCCTaGTTCGCCATGGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: TRGRGTGWNGGSAKGAAGMVLNA*FAMAPA
Trigger: CGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCAT...CCCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp AGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCTCTCCTCCCCTTCCTaGCCCTCATCTGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: RCRRGGGAQDGMVAVRKALSSPS*PSSGPA
Trigger: CGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAG...CGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCCTGCATGGCCTGCCTTaGCTGCACCTTGTACATCCT +
Preference number: 4 (lower is better)
Translates to: PHESRQQATVCQAGLSGALHGLP*LHLVHP
Trigger: AGGATGTACAAGGTGCAGCCAAGGCAGGCCATGCAG...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGGAGCTCCTCAGTGTCCTaGCCTCCCAGGTGGGATCAA +
Preference number: 4 (lower is better)
Translates to: TRGRGTGWNGGSAKGAAGSSSVS*PPRWDQ
Trigger: TTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCT...CCCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GGGAACGCGGCTCCCCTGACACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCCGTCTGGGTGCACGCTaGCTGTCGCCACAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GNAAPLTLEAREASLFACRLGAR*LSPQGR
Trigger: CCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACG...GCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCGTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGGTGCAAGGCGGTGCGGTaGAGCTTGTCATGGGCATTG +
Preference number: 4 (lower is better)
Translates to: TRGRGTGWNGGSAKGAAGCKAVR*SLSWAL
Trigger: CAATGCCCATGACAAGCTCCACCGCACCGCCTTGCA...CCCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR TCA 90 bp AGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCGGAACGCGGCTCCCCTaGCACTCGAAGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SVLASQVGSSRVGAAAAFGTRLP*HSKPGR
Trigger: CCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCGTTCC...GAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp GCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTCCAGGCGCTTCCCCATaGGAGCCGCCAGCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: ATAPRVEWATSNPQCPGAPGASP*EPPAGN
Trigger: GTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGG...AGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTGCTCATGTTCAGACAGGCCCAGTaGAAGGCGGTGCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: APASGCTLAVATGQELLMFRQAQ*KAVRWS
Trigger: GCTCCACCGCACCGCCTTGCACTGGGCCTGTCTGAA...CATGAGCAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCAAGTCGGGGTGCCGGGTaGGCACTGCCACGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGQYTVGARLLSNARSSSSRGAG*ALPRAG
Trigger: CCCTGCACGTGGCAGTGCGCACCCGGCACCCCGACT...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CGCGGCTCCCCTGACACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCTGGGCCCACACTCGATGAGGTaGTCCAGGCAGTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RGSPDTRSQGGLSLCLLGPHSMR*SRQSGC
Trigger: GCACCCCGACTGCCTGGAGCACCTCATCGAGTGTGG...GCCCAGCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTCTCCTCCCCTTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGCAGTCTCGAGCCAGCTaGACCGGGGTCACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LSSPSWPSSGPALSAALWQSRAS*TGVTEA
Trigger: GGCCTCCGTGACCCCGGTGCAGCTGGCTCGAGACTG...CCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGCAGGGCCTCCCGGATaGCGCGCTGCCAGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVAGPPG*RAASLE
Trigger: CTCGAGACTGGCAGCGCGGCATCCGGGAGGCCCTGC...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACAGGAACCACAGAGGTaGAGACGCGGGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: HKQSPVPRRFPMRAASRQQEPQR*RRGGGA
Trigger: TGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTG...TTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTGAGGGCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGCCTGCTGGGCCCGGTaGCGCTCTTCAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRAGTTEVQTRGRGTGWNACWAR*RSSVLP
Trigger: TGGCAGAACTGAAGAGCGGCACCGGGCCCAGCAGGC...ATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGCCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GTGCCAGGCCGGCCTGAGCGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAATCCTGGATGGCATCTaGCGGCCACGGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: VPGRPERGQYTVGARLLSILDGI*RPRAES
Trigger: GGACTCAGCCCGTGGCCGGCAGATGCCATCCAGGAT...TGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp AGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCAGGCATCCACCAGCTaGAGACAGGCCCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SVLASQVGSSRVGAAAAFQASTS*RQARPL
Trigger: CAGGGGCCGGGCCTGTCTGCAGCTGGTGGATGCCTG...GAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTCAGGCATCCACCAGCTaGAGACAGGCCCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ATAPRVEWATSNPQCPGAQASTS*RQARPL
Trigger: CAGGGGCCGGGCCTGTCTGCAGCTGGTGGATGCCTG...AGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGGTCCTGGACTTCTGTTaGTGTGGGGCCTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: DAGAGHRMEWWQCERRGGVLDFC*CGASNL
Trigger: CAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGAC...CCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGACCAGCAGGCAACGGTGTaGCAGGCCGGCCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PHTQTGPGESKASPLTWDQQATV*QAGLSG
Trigger: CCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTG...GTCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTCAGCAGGCAACGGTGTaGCAGGCCGGCCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LHGLERLLRHGTSVWVHAQQATV*QAGLSG
Trigger: CCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTG...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCATCAAGCAGGGTGGGTaGAGCTGCAGCGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQAIKQGG*SCSVPG
Trigger: GCCTGGAACGCTGCAGCTGCACCCACCCTGCTTGAT...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGGCACAGGATGGAATaGTGGCAGTGCGAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQAGHRME*WQCERR
Trigger: GCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCC...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTCTCTCTTTGCCTGCTaGGCCCGGTGCCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SPWHQRLGARWLSPQGRSSLFAC*ARCRSS
Trigger: TGAAGAGCGGCACCGGGCCCAGCAGGCAAAGAGAGA...GCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGCCTCTGCTCCAGCCCTaGGAGGGAACGCGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVPLLQP*EGTRLP
Trigger: GGGGAGCCGCGTTCCCTCCCAGGGCTGGAGCAGAGG...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGCTGCATGGCCTGCCTTaGCTGCACCTTGTACATCCT +
Preference number: 4 (lower is better)
Translates to: DAGAGHRMEWWQCERRGGLHGLP*LHLVHP
Trigger: AGGATGTACAAGGTGCAGCCAAGGCAGGCCATGCAG...CCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GTGCCAGGCCGGCCTGAGCGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCACGGTGGAGCTTGTCATaGGCATTGGGGTCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: VPGRPERGQYTVGARLLSRWSLS*ALGSPP
Trigger: CGGAGGGGACCCCAATGCCCATGACAAGCTCCACCG...TGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR TCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGGCGCCACACTCGATaGGGTGCTCCAGGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: LHGLERLLRHGTSVWVHAGRHTR*GAPGSR
Trigger: CCGACTGCCTGGAGCACCTCATCGAGTGTGGCGCCC...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGAACGCGGCTCCCCTaGCACTCGAAGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVGTRLP*HSKPGR
Trigger: CCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCGTTCC...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCACCAGGCGCTTCCCCATaGGAGCCGCCAGCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: RGQYTVGARLLSNARSSSPGASP*EPPAGN
Trigger: GTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGG...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGCCAGGCGCTTCCCCATaGGAGCCGCCAGCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVPGASP*EPPAGN
Trigger: GTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGG...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCCACTGCCCCAAGAGTTaGGTGGGCCACAAGCAATCC +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQAHCPKS*VGHKQS
Trigger: GGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTG...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CGCGGCTCCCCTGACACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCTGGGCCCATGTGAGGGAGGCTaGGCCTTCACCTTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: RGSPDTRSQGGLSLCLLGPCEGG*AFTFQP
Trigger: GGGCTGAAAGGTGAAGGCTCAGCCTCCCTCACATGG...GCCCAGCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCCCCTTCCTTATCCTGTaGGTTCAGGTGGGCGCCACA +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQAPFLIL*VQVGAT
Trigger: TGTGGCGCCCACCTGAACGCACAGGATAAGGAAGGG...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTGCTCATGTCATGGCTTTGTAGCTaGCGTGCCGCACGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: APASGCTLAVATGQELLMSWLCS*RAARPR
Trigger: ACGAGGCCGTGCGGCACGGCAGCTACAAAGCCATGA...CATGAGCAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp ATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTCAGTCTCGAGCCAGCTaGACCGGGGTCACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: MVLNACFAMAPASGCTLAQSRAS*TGVTEA
Trigger: GGCCTCCGTGACCCCGGTGCAGCTGGCTCGAGACTG...AGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCATCCCGGATGCCGCGCTaGCAGTCTCGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGQYTVGARLLSNARSSSSRMPR*QSRASC
Trigger: GCAGCTGGCTCGAGACTGGCAGCGCGGCATCCGGGA...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCACTCTCCTTGCGCCACGTGGGCCTaGAGGGCCTCCCGGATGCCG +
Preference number: 4 (lower is better)
Translates to: WLQLGTAPLRLVLGPHSPCATWA*RASRMP
Trigger: CGGCATCCGGGAGGCCCTGCAGGCCCACGTGGCGCA...AGGAGAGTGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTGGCGTTTAGGGGCCCAGCCCCACCAGCAGTACAGGCCTACACCAGTGTAATTCACCGGGTGCGGGGATaGGCCACGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LAFRGPAPPAVQAYTSVIHRVRG*ATWACR
Trigger: CCTGCAGGCCCACGTGGCGCATCCCCGCACCCGGTG...AATTACACTGGTGTAGGCCTGTACTGCTGGTGGGGCTGGGCCCCTAAACGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp TTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGTCCTCTGCTCCCAGGAACCACAGAGGTaGAGACGCGGGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: FLALIWTRAFCCLVVLCSQEPQR*RRGGGA
Trigger: TGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTG...GGAGCAGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTCAGGAACCACAGAGGTaGAGACGCGGGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: LHGLERLLRHGTSVWVHAQEPQR*RRGGGA
Trigger: TGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTG...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCAGCCTGCTGGGCCCGGTaGCGCTCTTCAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPACWAR*RSSVLP
Trigger: TGGCAGAACTGAAGAGCGGCACCGGGCCCAGCAGGC...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCGCCTCTCTCTTTGCCTaGTGGGCCCGGTGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LSGPQAIPSAQALPHESRASLFA*WARCRS
Trigger: AGAGCGGCACCGGGCCCAGCAGGCAAAGAGAGAGGC...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCAGCCTCTCTCTTTGCCTaGTGGGCCCGGTGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPASLFA*WARCRS
Trigger: AGAGCGGCACCGGGCCCAGCAGGCAAAGAGAGAGGC...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGATGGCCTGCCTTGGCTaGACCTTGTACATCCTGGAT +
Preference number: 4 (lower is better)
Translates to: DAGAGHRMEWWQCERRGGMACLG*TLYILD
Trigger: ATCCAGGATGTACAAGGTGCAGCCAAGGCAGGCCAT...CCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGGCCTGAGCGGGGCCGGAACCATGGCCAAATaGCTATCAATCAGCCCGGTA +
Preference number: 4 (lower is better)
Translates to: PHESRQQATVCQAGLSGAGTMAK*LSISPV
Trigger: TACCGGGCTGATTGATAGGCATTTGGCCATGGTTCC...GGCCCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp AGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCGCACCAGCGTCTGGGTaGACGCTGGCTGTCGCCACA +
Preference number: 4 (lower is better)
Translates to: SVLASQVGSSRVGAAAAFAPASG*TLAVAT
Trigger: TGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGC...GAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAAGCACCAGCGTCTGGGTaGACGCTGGCTGTCGCCACA +
Preference number: 4 (lower is better)
Translates to: HKQSPVPRRFPMRAASRQAPASG*TLAVAT
Trigger: TGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGC...TTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp ACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGGCTGGTTCTCAGCAGCTaGCTTCAGGAACATCTCCAG +
Preference number: 4 (lower is better)
Translates to: TRGRGTGWNGGSAKGAAGLVLSS*LQEHLQ
Trigger: CTGGAGATGTTCCTGAAGGCAGCTGCTGAGAACCAG...CCCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR CCA 90 bp GCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTCTCGCGCGTCCACTGTaGCACCTGCCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ATAPRVEWATSNPQCPGALARPL*HLPPAA
Trigger: AGCTGCTGGTGGCAGGTGCCACAGTGGACGCGCGAG...AGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GTGCCAGGCCGGCCTGAGCGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCATCCTGTGCGTTCAGGTaGGCGCCACACTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: VPGRPERGQYTVGARLLSSCAFR*APHSMR
Trigger: CCTCATCGAGTGTGGCGCCCACCTGAACGCACAGGA...TGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp AGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGGGGCACAGGATGGAATaGTGGCAGTGCGAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: RCRRGGGAQDGMVAVRKAGHRME*WQCERR
Trigger: GCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCC...CGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTGCTCATGGGGCACAGGATGGAATaGTGGCAGTGCGAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: APASGCTLAVATGQELLMGHRME*WQCERR
Trigger: GCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCC...CATGAGCAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp GCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCGGGCGGGGCACAGGATaGAATGGTGGCAGTGCGAAA +
Preference number: 4 (lower is better)
Translates to: AGTTEVQTRGRGTGWNGGGRGTG*NGGSAK
Trigger: TTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCC...GCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGCACCTTGTACATCCTaGATGGCATCTGCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQAAPCTS*MASAGH
Trigger: GTGGCCGGCAGATGCCATCCAGGATGTACAAGGTGC...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CGCGGCTCCCCTGACACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCTGGGCTGGGATCAAGCAGGGTaGGTGCAGCTGCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: RGSPDTRSQGGLSLCLLGWDQAG*VQLQRS
Trigger: GGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCA...GCCCAGCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTCCTCTGCTTCCCTGTaGGCTGGGTTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPWHQRLGARWLSPQGRSSSASL*AGFRAP
Trigger: AGGAGCTCTGAACCCAGCCCACAGGGAAGCAGAGGA...GCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGCTTGTCATGGGCATTaGGGTCCCCTCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQAACHGH*GPLRLS
Trigger: TGACAGACGGAGGGGACCCCAATGCCCATGACAAGC...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR TCA 90 bp GGGTTACGGGCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCTTCTGCCAGGGCTGCTaGGGCGGCACAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GLRATAPRVEWATSNPQCFCQGC*GGTGQR
Trigger: TCTCTGGCCTGTGCCGCCTCAGCAGCCCTGGCAGAA...GCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGCCCGTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp AGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCGGGACAAGTGGACACTaGGGACTCCCAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SVLASQVGSSRVGAAAAFGTSGH*GLPDPA
Trigger: GGCTGGGTCTGGGAGTCCTCAGTGTCCACTTGTCCC...GAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CGCGGCTCCCCTGACACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCTGGGCCACTGCCCCAAGAGTTaGGTGGGCCACAAGCAATCC +
Preference number: 4 (lower is better)
Translates to: RGSPDTRSQGGLSLCLLGHCPKS*VGHKQS
Trigger: GGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTG...GCCCAGCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GTGCCAGGCCGGCCTGAGCGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAGTCCACTGTGGCACCTaGCACCAGCAGCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: VPGRPERGQYTVGARLLSVHCGT*HQQLVH
Trigger: GTGAACAAGCTGCTGGTGGCAGGTGCCACAGTGGAC...TGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGCCTGCTGGGCCCGGTaGCGCTCTTCAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVACWAR*RSSVLP
Trigger: TGGCAGAACTGAAGAGCGGCACCGGGCCCAGCAGGC...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGCCTCTCTCTTTGCCTaGTGGGCCCGGTGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LHGLERLLRHGTSVWVHAASLFA*WARCRS
Trigger: AGAGCGGCACCGGGCCCAGCAGGCAAAGAGAGAGGC...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GGGAACGCGGCTCCCCTGACACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCACCCGCGCTTTCTGCTaGCTTGTGGTCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GNAAPLTLEAREASLFACTRAFC*LVVLCS
Trigger: GGAGCAGAGGACCACAAGGCAGCAGAAAGCGCGGGT...GCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCGTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp AGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACGGTGTGCCAGGCCGCTCCAGCTTGGGACTaGTCCCTTAAGGCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SAQALPHESRQQATVCQAAPAWD*SLKARS
Trigger: AGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGC...GGCCTGGCACACCGTTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGTCCTCTGCTCCGCACCAGCGTCTGGGTaGACGCTGGCTGTCGCCACA +
Preference number: 4 (lower is better)
Translates to: FLALIWTRAFCCLVVLCSAPASG*TLAVAT
Trigger: TGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGC...GGAGCAGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCACCCAGTGCAAGGCGGTaGGGTGGAGCTTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPPSARR*GGACHG
Trigger: CCCATGACAAGCTCCACCGCACCGCCTTGCACTGGG...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR CCA 90 bp TTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGTCCTCTGCTCCCTCGCGCGTCCACTGTaGCACCTGCCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FLALIWTRAFCCLVVLCSLARPL*HLPPAA
Trigger: AGCTGCTGGTGGCAGGTGCCACAGTGGACGCGCGAG...GGAGCAGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTCTCTCCTCCCCTTCCTaGCCCTCATCTGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: MVLNACFAMAPASGCTLALSSPS*PSSGPA
Trigger: CGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAG...AGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GTGCCAGGCCGGCCTGAGCGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCATGGGTGGCTCCAGCTTaGGACTGCTCCCTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: VPGRPERGQYTVGARLLSWVAPA*DCSLKA
Trigger: AGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCA...TGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCGCTCAGGCCGGCCTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CGCGGCTCCCCTGACACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCTGGGCGCAAGCCCCCTAACCTaGGACAAGTGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: RGSPDTRSQGGLSLCLLGASPLT*DKWTLR
Trigger: CCTCAGTGTCCACTTGTCCCAGGTTAGGGGGCTTGC...GCCCAGCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCCCCAAGAGTTGAGTaGGCCACAAGCAATCCCCAG +
Preference number: 4 (lower is better)
Translates to: LRHGTSVWVHAGCRHRAGAPRVE*ATSNPQ
Trigger: CTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGC...TCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CCCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGACATGGCACCAGCGTCTaGGTGCACGCTGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: PTHTDWPWREQGKPPNLGHGTSV*VHAGCR
Trigger: GCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATG...TCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CCCTGGGTGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCACCCACAGGCTCCACCTaGGCCTGGGACTGCGGCTTA +
Preference number: 4 (lower is better)
Translates to: PWVAPAWDCSLKARSWPSPTGST*AWDCGL
Trigger: TAAGCCGCAGTCCCAGGCCCAGGTGGAGCCTGTGGG...TGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR TCA 90 bp CACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAATTCACCAGCTGGCTGTaGCCCTTCAGACAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HKQSPVPRRFPMRAASRQFTSWL*PFRQAQ
Trigger: CTGGGCCTGTCTGAAGGGTCACAGCCAGCTGGTGAA...TTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGACGGGACAAGTGGACACTaGGGACTCCCAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: PHTQTGPGESKASPLTWDGTSGH*GLPDPA
Trigger: GGCTGGGTCTGGGAGTCCTCAGTGTCCACTTGTCCC...GTCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp GCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCTGCTCATGGGGCCTCAAACCTGTTaGGTAGCCACCTCAGATGAC +
Preference number: 4 (lower is better)
Translates to: APASGCTLAVATGQELLMGPQTC*VATSDD
Trigger: GTCATCTGAGGTGGCTACTCAACAGGTTTGAGGCCC...CATGAGCAGCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTTTCAGACAGGCCCAGTaGAAGGCGGTGCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LHGLERLLRHGTSVWVHAFRQAQ*KAVRWS
Trigger: GCTCCACCGCACCGCCTTGCACTGGGCCTGTCTGAA...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CCCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGACCACACTCGATGAGGTaGTCCAGGCAGTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PTHTDWPWREQGKPPNLGPHSMR*SRQSGC
Trigger: GCACCCCGACTGCCTGGAGCACCTCATCGAGTGTGG...TCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGTCCTCTGCTCCCCACACTCGATGAGGTaGTCCAGGCAGTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: FLALIWTRAFCCLVVLCSPHSMR*SRQSGC
Trigger: GCACCCCGACTGCCTGGAGCACCTCATCGAGTGTGG...GGAGCAGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCTCATGGCTTTGTAGCTaGCGTGCCGCACGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LSGPQAIPSAQALPHESRSWLCS*RAARPR
Trigger: ACGAGGCCGTGCGGCACGGCAGCTACAAAGCCATGA...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCACTCTCCTCAGTCTCGAGCCAGCTaGACCGGGGTCACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WLQLGTAPLRLVLGPHSPQSRAS*TGVTEA
Trigger: GGCCTCCGTGACCCCGGTGCAGCTGGCTCGAGACTG...AGGAGAGTGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TGGGTCCTGGACTTCTGTTGCTGTGGGGCCTCAAACCTGTTGAGTAGCCACCTCGCAGGGCCTCCCGGATaGCGCGCTGCCAGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: WVLDFCCCGASNLLSSHLAGPPG*RAASLE
Trigger: CTCGAGACTGGCAGCGCGGCATCCGGGAGGCCCTGC...GAGGTGGCTACTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCAGGCCCCTGCATGGCCTaGCTTGGCTGCACCTTGTAC +
Preference number: 4 (lower is better)
Translates to: RGQYTVGARLLSNARSSSGPCMA*LGCTLY
Trigger: GTACAAGGTGCAGCCAAGGCAGGCCATGCAGGGGCC...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CCCTGGGTGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCAGGCCCCTGCATGGCCTaGCTTGGCTGCACCTTGTAC +
Preference number: 4 (lower is better)
Translates to: PWVAPAWDCSLKARSWPSGPCMA*LGCTLY
Trigger: GTACAAGGTGCAGCCAAGGCAGGCCATGCAGGGGCC...TGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTCCCCAGAGAAAGCCATaGCCACAGGCATCCACCAGC +
Preference number: 4 (lower is better)
Translates to: ATAPRVEWATSNPQCPGAPQRKP*PQASTS
Trigger: GCTGGTGGATGCCTGTGGGCATGGCTTTCTCTGGGG...AGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp AGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGGTCCTGGACTTCTGTTaGTGTGGGGCCTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: RCRRGGGAQDGMVAVRKAVLDFC*CGASNL
Trigger: CAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGAC...CGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp ATAAGGGGACATAAGGGCCTCAGGCAAACTAGGGTTACGGGCCACTGCCCCAAGCAGCAGGCAACGGTGTaGCAGGCCGGCCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: IRGHKGLRQTRVTGHCPKQQATV*QAGLSG
Trigger: CCCGCTCAGGCCGGCCTGGCACACCGTTGCCTGCTG...CTTGGGGCAGTGGCCCGTAACCCTAGTTTGCCTGAGGCCCTTATGTCCCCTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp ATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTCAGGGTGGGTGCAGCTaGAGCGTTCCAGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: MVLNACFAMAPASGCTLAQGGCS*SVPGKS
Trigger: GCTCTTGCCTGGAACGCTGCAGCTGCACCCACCCTG...AGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTGAGGGCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATCCACAGGGCAGGAGCTaGTCATGGAAAGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LRAGTTEVQTRGRGTGWNPQGRS*SWKGVC
Trigger: GCACACACCTTTCCATGAGCAGCTCCTGCCCTGTGG...ATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp GGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCCTGGTTCTCAGCAGCTaGCTTCAGGAACATCTCCAG +
Preference number: 4 (lower is better)
Translates to: GADAGAGHRMEWWQCERRLVLSS*LQEHLQ
Trigger: CTGGAGATGTTCCTGAAGGCAGCTGCTGAGAACCAG...GCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR GCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCACCCAGTGCAAGGCGGTaGGGTGGAGCTTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: RGQYTVGARLLSNARSSSPSARR*GGACHG
Trigger: CCCATGACAAGCTCCACCGCACCGCCTTGCACTGGG...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR CCA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCAGGGCGGGGCACAGGATaGAATGGTGGCAGTGCGAAA +
Preference number: 4 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPGRGTG*NGGSAK
Trigger: TTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCC...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCTCTCTCTTTGCCTGCTaGGCCCGGTGCCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSGPQAIPSAQALPHESRSLFAC*ARCRSS
Trigger: TGAAGAGCGGCACCGGGCCCAGCAGGCAAAGAGAGA...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCATCTCTCTTTGCCTGCTaGGCCCGGTGCCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPSLFAC*ARCRSS
Trigger: TGAAGAGCGGCACCGGGCCCAGCAGGCAAAGAGAGA...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTCTCCTCCCCTTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGTTCCTGGCCCTCATCTaGACCCGCGCTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSPSWPSSGPALSAALWFLALI*TRAFCC
Trigger: GCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA...CCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCCTTAAGGCTCGTTCTTaGCCCTCACTCTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AGTTEVQTRGRGTGWNGGLKARS*PSLSSP
Trigger: AGGGGAGGAGAGTGAGGGCCAAGAACGAGCCTTAAG...GCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCCTAACCTGGGACAAGTaGACACTGAGGACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SPWHQRLGARWLSPQGRSLTWDK*TLRTPR
Trigger: TCTGGGAGTCCTCAGTGTCCACTTGTCCCAGGTTAG...GCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTCCCACACACACAGACTaGCCCTGGAGAGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ATAPRVEWATSNPQCPGAPTHTD*PWREQG
Trigger: GCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGGG...AGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTCTCCTCCCCTTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGCTTGTACATCCTGGATaGCATCTGCCGGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: LSSPSWPSSGPALSAALWLVHPG*HLPATG
Trigger: GCCCGTGGCCGGCAGATGCCATCCAGGATGTACAAG...CCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCCTTGTACATCCTGGATaGCATCTGCCGGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: LSGPQAIPSAQALPHESRLVHPG*HLPATG
Trigger: GCCCGTGGCCGGCAGATGCCATCCAGGATGTACAAG...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GGGAACGCGGCTCCCCTGACACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCAGCTCCTCAGTGTCCTaGCCTCCCAGGTGGGATCAA +
Preference number: 4 (lower is better)
Translates to: GNAAPLTLEAREASLFACSSSVS*PPRWDQ
Trigger: TTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCT...GCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTTCTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACCCCACAGGCTCCACCTaGGCCTGGGACTGCGGCTTA +
Preference number: 4 (lower is better)
Translates to: LLHGLERLLRHGTSVWVHPTGST*AWDCGL
Trigger: TAAGCCGCAGTCCCAGGCCCAGGTGGAGCCTGTGGG...GTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR TCA 90 bp CCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGACTTCACCAGCTGGCTGTaGCCCTTCAGACAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PHTQTGPGESKASPLTWDFTSWL*PFRQAQ
Trigger: CTGGGCCTGTCTGAAGGGTCACAGCCAGCTGGTGAA...GTCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGCCATGTGAGGGAGGCTaGGCCTTCACCTTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVPCEGG*AFTFQP
Trigger: GGGCTGAAAGGTGAAGGCTCAGCCTCCCTCACATGG...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR TCA 90 bp CCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGACAACCCAGGACCCATGTaGGGGAGGCTGAGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: PHTQTGPGESKASPLTWDNPGPM*GRLSLH
Trigger: GTGAAGGCTCAGCCTCCCTCACATGGGTCCTGGGTT...GTCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR TCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTAACCCAGGACCCATGTaGGGGAGGCTGAGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LHGLERLLRHGTSVWVHANPGPM*GRLSLH
Trigger: GTGAAGGCTCAGCCTCCCTCACATGGGTCCTGGGTT...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp TGGGTCCTGGACTTCTGTTGCTGTGGGGCCTCAAACCTGTTGAGTAGCCACCTCTGCCGCACGGCCTCGTaGAGAGCCGTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: WVLDFCCCGASNLLSSHLCRTAS*RAVSPS
Trigger: GGAAGGGGACACGGCTCTGCACGAGGCCGTGCGGCA...GAGGTGGCTACTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGACTCATGGCTTTGTAGCTaGCGTGCCGCACGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PHTQTGPGESKASPLTWDSWLCS*RAARPR
Trigger: ACGAGGCCGTGCGGCACGGCAGCTACAAAGCCATGA...GTCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTTCTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTCACCGGGTGCGGGGATaGGCCACGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLSNARSSSSVLGLLRQPHRVRG*ATWACR
Trigger: CCTGCAGGCCCACGTGGCGCATCCCCGCACCCGGTG...AGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CCCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGAACCCGCGCTTTCTGCTaGCTTGTGGTCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PTHTDWPWREQGKPPNLGTRAFC*LVVLCS
Trigger: GGAGCAGAGGACCACAAGGCAGCAGAAAGCGCGGGT...TCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GGGTTACGGGCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCTGGACCCGCGCTTTCTaGTGCCTTGTGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GLRATAPRVEWATSNPQCWTRAF*CLVVLC
Trigger: GCAGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCA...GCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGCCCGTAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGACTGGACCCGCGCTTTCTaGTGCCTTGTGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PHTQTGPGESKASPLTWDWTRAF*CLVVLC
Trigger: GCAGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCA...GTCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCATGGCCTGCCTTGGCTaGACCTTGTACATCCTGGAT +
Preference number: 4 (lower is better)
Translates to: AGTTEVQTRGRGTGWNGGMACLG*TLYILD
Trigger: ATCCAGGATGTACAAGGTGCAGCCAAGGCAGGCCAT...GCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GGGTTACGGGCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCCCCAGAGAAAGCCATaGCCACAGGCATCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GLRATAPRVEWATSNPQCPQRKP*PQASTS
Trigger: GCTGGTGGATGCCTGTGGGCATGGCTTTCTCTGGGG...GCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGCCCGTAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGCCCCAGAGAAAGCCATaGCCACAGGCATCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVPQRKP*PQASTS
Trigger: GCTGGTGGATGCCTGTGGGCATGGCTTTCTCTGGGG...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCGAGGCTTCTCTCAAATaGGCGCTCCAGCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: AGTTEVQTRGRGTGWNGGEASLK*ALQLIS
Trigger: ACTGATGAGCTGGAGCGCGCATTTGAGAGAAGCCTC...GCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp AGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCCACAGGGCAGGAGCTaGTCATGGAAAGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SVLASQVGSSRVGAAAAFPQGRS*SWKGVC
Trigger: GCACACACCTTTCCATGAGCAGCTCCTGCCCTGTGG...GAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp GCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTATGGTCTTGAACGCCTaGTTCGCCATGGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: ATAPRVEWATSNPQCPGAMVLNA*FAMAPA
Trigger: CGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCAT...AGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTTCCTGTGCGTTCAGGTaGGCGCCACACTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: LHGLERLLRHGTSVWVHASCAFR*APHSMR
Trigger: CCTCATCGAGTGTGGCGCCCACCTGAACGCACAGGA...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGCACAGGATGGAATGGTaGCAGTGCGAAAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVHRMEW*QCERRG
Trigger: GCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTG...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCACACAGGATGGAATGGTaGCAGTGCGAAAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: RGQYTVGARLLSNARSSSHRMEW*QCERRG
Trigger: GCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTG...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGTCCTCTGCTCCGGGCGGGGCACAGGATaGAATGGTGGCAGTGCGAAA +
Preference number: 4 (lower is better)
Translates to: FLALIWTRAFCCLVVLCSGRGTG*NGGSAK
Trigger: TTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCC...GGAGCAGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGTCCTCTGCTCCTTCCTGGCCCTCATCTaGACCCGCGCTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLALIWTRAFCCLVVLCSFLALI*TRAFCC
Trigger: GCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA...GGAGCAGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GGGAACGCGGCTCCCCTGACACTCGAAGCCAGGGAGGCCTCTCTCTTTGCCTGCCTTAAGGCTCGTTCTTaGCCCTCACTCTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GNAAPLTLEAREASLFACLKARS*PSLSSP
Trigger: AGGGGAGGAGAGTGAGGGCCAAGAACGAGCCTTAAG...GCAGGCAAAGAGAGAGGCCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGCACACAGACTGGCCCTaGAGAGAGCAAGGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVHTDWP*REQGKP
Trigger: GGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTG...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCACACACAGACTGGCCCTaGAGAGAGCAAGGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: RGQYTVGARLLSNARSSSHTDWP*REQGKP
Trigger: GGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTG...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GGGTTACGGGCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCTTGTACATCCTGGATaGCATCTGCCGGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: GLRATAPRVEWATSNPQCLVHPG*HLPATG
Trigger: GCCCGTGGCCGGCAGATGCCATCCAGGATGTACAAG...GCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGCCCGTAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCATGCTTCCCTGTGGGCTaGGTTCAGAGCTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPCFPVG*VQSSSV
Trigger: CACTGAGGAGCTCTGAACCCAGCCCACAGGGAAGCA...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGTCGCCACAGGGCAGGAGCGAAACGTACAGACGGTaGAAGAGGAAGTCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPWHQRLGARWLSPQGRSETYRR*KRKSRE
Trigger: CTCCCTAGACTTCCTCTTCCACCGTCTGTACGTTTC...GCTCCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp TGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCACTCTCCTCATGGCACCAGCGTCTaGGTGCACGCTGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: WLQLGTAPLRLVLGPHSPHGTSV*VHAGCR
Trigger: GCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATG...AGGAGAGTGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCAGCTTGTCATGGGCATTaGGGTCCCCTCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPACHGH*GPLRLS
Trigger: TGACAGACGGAGGGGACCCCAATGCCCATGACAAGC...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR CCA 90 bp CTTCTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACCGGTGGAGCTTGTCATaGGCATTGGGGTCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: LLHGLERLLRHGTSVWVHRWSLS*ALGSPP
Trigger: CGGAGGGGACCCCAATGCCCATGACAAGCTCCACCG...GTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR TCA 90 bp CTCTCCTCCCCTTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGAGTAGCCACCTCAGATaGCCAGAACCCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LSSPSWPSSGPALSAALWSSHLR*PEPTSR
Trigger: TCTGGAGGTGGGTTCTGGTCATCTGAGGTGGCTACT...CCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp TGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCCATCTTCTCCATGGTCTTaGACGCCTGCTTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: CPGLPGGIKQGGCSCSVPSSPWS*TPASPW
Trigger: CCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAGA...TGGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTGGCGTTTAGGGGCCCAGCCCCACCAGCAGTACAGGCCTACACCAGTGTAATTGGCCCCTGCATGGCCTaGCTTGGCTGCACCTTGTAC +
Preference number: 4 (lower is better)
Translates to: LAFRGPAPPAVQAYTSVIGPCMA*LGCTLY
Trigger: GTACAAGGTGCAGCCAAGGCAGGCCATGCAGGGGCC...AATTACACTGGTGTAGGCCTGTACTGCTGGTGGGGCTGGGCCCCTAAACGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp GCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCGGAACCATGGCCAAATaGCTATCAATCAGCCCGGTA +
Preference number: 4 (lower is better)
Translates to: AGTTEVQTRGRGTGWNGGGTMAK*LSISPV
Trigger: TACCGGGCTGATTGATAGGCATTTGGCCATGGTTCC...GCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp CACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAATTGACCCGGGCTCCCTaGTTAAGCAGCTGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: HKQSPVPRRFPMRAASRQLTRAP*LSSCLR
Trigger: CCTCAAACAGCTGCTTAACCAGGGAGCCCGGGTCAA...TTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CCCTGGGTGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCATGGGTGGCTCCAGCTTaGGACTGCTCCCTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: PWVAPAWDCSLKARSWPSWVAPA*DCSLKA
Trigger: AGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCA...TGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCAGCAAGCCCCCTAACCTaGGACAAGTGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: RGQYTVGARLLSNARSSSASPLT*DKWTLR
Trigger: CCTCAGTGTCCACTTGTCCCAGGTTAGGGGGCTTGC...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CCCTGGGTGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCAGCACCTTGTACATCCTaGATGGCATCTGCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: PWVAPAWDCSLKARSWPSAPCTS*MASAGH
Trigger: GTGGCCGGCAGATGCCATCCAGGATGTACAAGGTGC...TGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTGCCCCAAGAGTTGAGTaGGCCACAAGCAATCCCCAG +
Preference number: 4 (lower is better)
Translates to: MVLNACFAMAPASGCTLAAPRVE*ATSNPQ
Trigger: CTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGC...AGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGAGCTCCTCAGTGTCCTaGCCTCCCAGGTGGGATCAA +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVSSSVS*PPRWDQ
Trigger: TTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCT...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGTCCTCTGCTCCTGCTTCCCTGTGGGCTaGGTTCAGAGCTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: FLALIWTRAFCCLVVLCSCFPVG*VQSSSV
Trigger: CACTGAGGAGCTCTGAACCCAGCCCACAGGGAAGCA...GGAGCAGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTTCCTCTGCTTCCCTGTaGGCTGGGTTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: MVLNACFAMAPASGCTLASSASL*AGFRAP
Trigger: AGGAGCTCTGAACCCAGCCCACAGGGAAGCAGAGGA...AGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GCAGGAACCACAGAGGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCTTAAGATTCACTTTCTaGCGTTTAGGGGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AGTTEVQTRGRGTGWNGGLRFTF*RLGAQP
Trigger: GGGCTGGGCCCCTAAACGCCAGAAAGTGAATCTTAA...GCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACCTCTGTGGTTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR TCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGAGTAGCCACCTCAGATaGCCAGAACCCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVSSHLR*PEPTSR
Trigger: TCTGGAGGTGGGTTCTGGTCATCTGAGGTGGCTACT...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CCCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGAGGGCCTCAAACCTGTTaGGTAGCCACCTCAGATGAC +
Preference number: 4 (lower is better)
Translates to: PTHTDWPWREQGKPPNLGGPQTC*VATSDD
Trigger: GTCATCTGAGGTGGCTACTCAACAGGTTTGAGGCCC...TCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp GGGTTACGGGCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCTCTTCTCCATGGTCTTaGACGCCTGCTTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: GLRATAPRVEWATSNPQCSSPWS*TPASPW
Trigger: CCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAGA...GCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGCCCGTAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCAGCTCCAGCTTGGGACTaGTCCCTTAAGGCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: RGQYTVGARLLSNARSSSAPAWD*SLKARS
Trigger: AGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGC...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp GCAGGAGCTGCTCATGGAAAGGTGTGTGCCCCTAGTGTGCAGCACTGGTCAGCTATCAAGCAGGGTGGGTaGAGCTGCAGCGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGAAHGKVCAPSVQHWSAIKQGG*SCSVPG
Trigger: GCCTGGAACGCTGCAGCTGCACCCACCCTGCTTGAT...AGCTGACCAGTGCTGCACACTAGGGGCACACACCTTTCCATGAGCAGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCAGCAGCAGTAGCTTCATaGCTTTGTAGCTGCCGTGCC +
Preference number: 4 (lower is better)
Translates to: RGQYTVGARLLSNARSSSAAVAS*LCSCRA
Trigger: GGCACGGCAGCTACAAAGCCATGAAGCTACTGCTGC...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CCCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGAGCAGCAGTAGCTTCATaGCTTTGTAGCTGCCGTGCC +
Preference number: 4 (lower is better)
Translates to: PTHTDWPWREQGKPPNLGAAVAS*LCSCRA
Trigger: GGCACGGCAGCTACAAAGCCATGAAGCTACTGCTGC...TCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTGGCGTTTAGGGGCCCAGCCCCACCAGCAGTACAGGCCTACACCAGTGTAATTTTCCTGGCCCTCATCTaGACCCGCGCTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAFRGPAPPAVQAYTSVIFLALI*TRAFCC
Trigger: GCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA...AATTACACTGGTGTAGGCCTGTACTGCTGGTGGGGCTGGGCCCCTAAACGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp TGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCACTCTCCTCACACAGACTGGCCCTaGAGAGAGCAAGGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: WLQLGTAPLRLVLGPHSPHTDWP*REQGKP
Trigger: GGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTG...AGGAGAGTGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTTCTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCACCTTGTACATCCTaGATGGCATCTGCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLHGLERLLRHGTSVWVHAPCTS*MASAGH
Trigger: GTGGCCGGCAGATGCCATCCAGGATGTACAAGGTGC...GTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp TGGGTCCTGGACTTCTGTTGCTGTGGGGCCTCAAACCTGTTGAGTAGCCACCTCTTCACCAGCTGGCTGTaGCCCTTCAGACAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WVLDFCCCGASNLLSSHLFTSWL*PFRQAQ
Trigger: CTGGGCCTGTCTGAAGGGTCACAGCCAGCTGGTGAA...GAGGTGGCTACTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp TTTAGGGCAGAGCTTCTTAAGATTCACTTTCTGGCGTTTAGGGGCCCAGCCCCAGGGCGCCACACTCGATaGGGTGCTCCAGGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: FRAELLKIHFLAFRGPAPGRHTR*GAPGSR
Trigger: CCGACTGCCTGGAGCACCTCATCGAGTGTGGCGCCC...TGGGGCTGGGCCCCTAAACGCCAGAAAGTGAATCTTAAGAAGCTCTGCCCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR TCA 90 bp GGAACCATGGCCAAATGCCTATCAATCAGCCCGGTACCTAATGTAACCCAGGACGGAACGCGGCTCCCCTaGCACTCGAAGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTMAKCLSISPVPNVTQDGTRLP*HSKPGR
Trigger: CCTCCCTGGCTTCGAGTGTCAGGGGAGCCGCGTTCC...GTCCTGGGTTACATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp GGAACCATGGCCAAATGCCTATCAATCAGCCCGGTACCTAATGTAACCCAGGACTCCCGGATGCCGCGCTaGCAGTCTCGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTMAKCLSISPVPNVTQDSRMPR*QSRASC
Trigger: GCAGCTGGCTCGAGACTGGCAGCGCGGCATCCGGGA...GTCCTGGGTTACATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGCCAGTACACAGTGGGTaGGAGGCTTCTCTCAAATGC +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVPVHSG*EASLKC
Trigger: GCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGG...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TGGGTCCTGGACTTCTGTTGCTGTGGGGCCTCAAACCTGTTGAGTAGCCACCTCATCAAGCAGGGTGGGTaGAGCTGCAGCGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WVLDFCCCGASNLLSSHLIKQGG*SCSVPG
Trigger: GCCTGGAACGCTGCAGCTGCACCCACCCTGCTTGAT...GAGGTGGCTACTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp ATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTTGTGTGCCCCTAGTGTaGAGCACTGGTCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: MVLNACFAMAPASGCTLACVPLV*STGQLF
Trigger: GAAAAGCTGACCAGTGCTGCACACTAGGGGCACACA...AGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTTGTGTGCCCCTAGTGTaGAGCACTGGTCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LHGLERLLRHGTSVWVHACVPLV*STGQLF
Trigger: GAAAAGCTGACCAGTGCTGCACACTAGGGGCACACA...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp CTTCTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTCTCGCGCGTCCACTGTaGCACCTGCCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLSNARSSSSVLGLLRQPLARPL*HLPPAA
Trigger: AGCTGCTGGTGGCAGGTGCCACAGTGGACGCGCGAG...AGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ATAAGGGGACATAAGGGCCTCAGGCAAACTAGGGTTACGGGCCACTGCCCCAAGTCCTGTGCGTTCAGGTaGGCGCCACACTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: IRGHKGLRQTRVTGHCPKSCAFR*APHSMR
Trigger: CCTCATCGAGTGTGGCGCCCACCTGAACGCACAGGA...CTTGGGGCAGTGGCCCGTAACCCTAGTTTGCCTGAGGCCCTTATGTCCCCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTTCTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCAGCAGTAGCTTCATaGCTTTGTAGCTGCCGTGCC +
Preference number: 4 (lower is better)
Translates to: LLHGLERLLRHGTSVWVHAAVAS*LCSCRA
Trigger: GGCACGGCAGCTACAAAGCCATGAAGCTACTGCTGC...GTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTTCTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACCTTAAGGCTCGTTCTTaGCCCTCACTCTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLHGLERLLRHGTSVWVHLKARS*PSLSSP
Trigger: AGGGGAGGAGAGTGAGGGCCAAGAACGAGCCTTAAG...GTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTGGCTCTAACCTGGGACAAGTaGACACTGAGGACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: MVLNACFAMAPASGCTLALTWDK*TLRTPR
Trigger: TCTGGGAGTCCTCAGTGTCCACTTGTCCCAGGTTAG...AGCCAGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACGCTCTAACCTGGGACAAGTaGACACTGAGGACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LHGLERLLRHGTSVWVHALTWDK*TLRTPR
Trigger: TCTGGGAGTCCTCAGTGTCCACTTGTCCCAGGTTAG...AGCGTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GCAGGAGCTGCTCATGGAAAGGTGTGTGCCCCTAGTGTGCAGCACTGGTCAGCTGCAAGCCCCCTAACCTaGGACAAGTGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: AGAAHGKVCAPSVQHWSAASPLT*DKWTLR
Trigger: CCTCAGTGTCCACTTGTCCCAGGTTAGGGGGCTTGC...AGCTGACCAGTGCTGCACACTAGGGGCACACACCTTTCCATGAGCAGCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp CTGGGTTCAGAGCTCCTCAGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGACTTCTGTTGCTGTaGGGCCTCAAACCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LGSELLSVLASQVGSSRVGLLLL*GLKPVE
Trigger: CTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCC...CACCCTGCTTGATCCCACCTGGGAGGCCAGGACACTGAGGAGCTCTGAACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTTCTCCATGGTCTTGAACGCCTGCTTCGCCATGGCACCAGCGTCTGGGTGCACCAACCTAGTGGGTCCTaGACTTCTGTTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLHGLERLLRHGTSVWVHQPSGS*TSVAVG
Trigger: CCCCACAGCAACAGAAGTCCAGGACCCACTAGGTTG...GTGCACCCAGACGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCATGGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCACTCTCCTGCCCCAAGAGTTGAGTaGGCCACAAGCAATCCCCAG +
Preference number: 4 (lower is better)
Translates to: WLQLGTAPLRLVLGPHSPAPRVE*ATSNPQ
Trigger: CTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGC...AGGAGAGTGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTGGCGTTTAGGGGCCCAGCCCCACCAGCAGTACAGGCCTACACCAGTGTAATTTCCTCTGCTTCCCTGTaGGCTGGGTTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LAFRGPAPPAVQAYTSVISSASL*AGFRAP
Trigger: AGGAGCTCTGAACCCAGCCCACAGGGAAGCAGAGGA...AATTACACTGGTGTAGGCCTGTACTGCTGGTGGGGCTGGGCCCCTAAACGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp ACCATGGCCAAATGCCTATCAATCAGCCCGGTACCTAATGTAACCCAGGACCCACGTCTGGGTGCACGCTaGCTGTCGCCACAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TMAKCLSISPVPNVTQDPRLGAR*LSPQGR
Trigger: CCTGCCCTGTGGCGACAGCCAGCGTGCACCCAGACG...TGGGTCCTGGGTTACATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp CTTCTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTCATGGCACCAGCGTCTaGGTGCACGCTGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: LLSNARSSSSVLGLLRQPHGTSV*VHAGCR
Trigger: GCGACAGCCAGCGTGCACCCAGACGCTGGTGCCATG...AGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTGGCTCCACCTGGGCCTaGGACTGCGGCTTAACCAGG +
Preference number: 4 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSGSTWA*DCGLTR
Trigger: CCTGGTTAAGCCGCAGTCCCAGGCCCAGGTGGAGCC...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR TCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCCCACTTACCAACTGCTaGATGCTGATGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: LSGPQAIPSAQALPHESRPLTNC*MLMKSM
Trigger: CATGGACTTCATCAGCATTCAGCAGTTGGTAAGTGG...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp TTCCTGGCCCTCATCTGGACCCGCGCTTTCTGCTGCCTTGTGGTCCTCTGCTCCCCTCCAGAGTTCCTATaGCCAAAGTTGTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: FLALIWTRAFCCLVVLCSPPEFL*PKLSRA
Trigger: GGCTCTAGACAACTTTGGTCATAGGAACTCTGGAGG...GGAGCAGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCAGATGAGGGCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTATCCTGGATGGCATCTaGCGGCCACGGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSILDGI*RPRAES
Trigger: GGACTCAGCCCGTGGCCGGCAGATGCCATCCAGGAT...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp GGAACCATGGCCAAATGCCTATCAATCAGCCCGGTACCTAATGTAACCCAGGACCTCTCCTCCCCTTCCTaGCCCTCATCTGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: GTMAKCLSISPVPNVTQDLSSPS*PSSGPA
Trigger: CGCGGGTCCAGATGAGGGCCAGGAAGGGGAGGAGAG...GTCCTGGGTTACATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp ATAAGGGGACATAAGGGCCTCAGGCAAACTAGGGTTACGGGCCACTGCCCCAAGTGCTTCCCTGTGGGCTaGGTTCAGAGCTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: IRGHKGLRQTRVTGHCPKCFPVG*VQSSSV
Trigger: CACTGAGGAGCTCTGAACCCAGCCCACAGGGAAGCA...CTTGGGGCAGTGGCCCGTAACCCTAGTTTGCCTGAGGCCCTTATGTCCCCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCCAGCAGGCAACCTAGTGTGCAGCACTaGTCAGCTTTTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: HKQSPVPRRFPMRAASRQPSVQH*SAFPHS
Trigger: ACTATGTGGAAAAGCTGACCAGTGCTGCACACTAGG...TTGCCTGCTGGCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp ACCATGGCCAAATGCCTATCAATCAGCCCGGTACCTAATGTAACCCAGGACCCAGGCTCCACCTGGGCCTaGGACTGCGGCTTAACCAGG +
Preference number: 4 (lower is better)
Translates to: TMAKCLSISPVPNVTQDPGSTWA*DCGLTR
Trigger: CCTGGTTAAGCCGCAGTCCCAGGCCCAGGTGGAGCC...TGGGTCCTGGGTTACATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318357.9
CDS-3UTR TCA 90 bp CCCTGGGTGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCACCACTTACCAACTGCTaGATGCTGATGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: PWVAPAWDCSLKARSWPSPLTNC*MLMKSM
Trigger: CATGGACTTCATCAGCATTCAGCAGTTGGTAAGTGG...TGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTTGGACCCGCGCTTTCTaGTGCCTTGTGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSWTRAF*CLVVLC
Trigger: GCAGAGGACCACAAGGCAGCAGAAAGCGCGGGTCCA...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp TGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCACTCTCCTATGGCCTGCCTTGGCTaGACCTTGTACATCCTGGAT +
Preference number: 4 (lower is better)
Translates to: WLQLGTAPLRLVLGPHSPMACLG*TLYILD
Trigger: ATCCAGGATGTACAAGGTGCAGCCAAGGCAGGCCAT...AGGAGAGTGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp ATAAGGGGACATAAGGGCCTCAGGCAAACTAGGGTTACGGGCCACTGCCCCAAGGTCCTGGACTTCTGTTaGTGTGGGGCCTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: IRGHKGLRQTRVTGHCPKVLDFC*CGASNL
Trigger: CAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGAC...CTTGGGGCAGTGGCCCGTAACCCTAGTTTGCCTGAGGCCCTTATGTCCCCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TGGGTCCTGGACTTCTGTTGCTGTGGGGCCTCAAACCTGTTGAGTAGCCACCTCCTGCATGGCCTGCCTTaGCTGCACCTTGTACATCCT +
Preference number: 4 (lower is better)
Translates to: WVLDFCCCGASNLLSSHLLHGLP*LHLVHP
Trigger: AGGATGTACAAGGTGCAGCCAAGGCAGGCCATGCAG...GAGGTGGCTACTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCCAGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ATAAGGGGACATAAGGGCCTCAGGCAAACTAGGGTTACGGGCCACTGCCCCAAGCAACCTAGTGGGTCCTaGACTTCTGTTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: IRGHKGLRQTRVTGHCPKQPSGS*TSVAVG
Trigger: CCCCACAGCAACAGAAGTCCAGGACCCACTAGGTTG...CTTGGGGCAGTGGCCCGTAACCCTAGTTTGCCTGAGGCCCTTATGTCCCCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTTGGGATCAAGCAGGGTaGGTGCAGCTGCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSWDQAG*VQLQRS
Trigger: GGAACGCTGCAGCTGCACCCACCCTGCTTGATCCCA...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp CCCTGGGTGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCACCTAGTGTGCAGCACTaGTCAGCTTTTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: PWVAPAWDCSLKARSWPSPSVQH*SAFPHS
Trigger: ACTATGTGGAAAAGCTGACCAGTGCTGCACACTAGG...TGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR TCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCCGCTTTTTCCGTCTTTaGACCAAGTTTTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: LSGPQAIPSAQALPHESRRFFRL*TKFSKS
Trigger: TGACTTGGAAAACTTGGTTCAAAGACGGAAAAAGCG...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTCACTGCCCCAAGAGTTaGGTGGGCCACAAGCAATCC +
Preference number: 4 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSHCPKS*VGHKQS
Trigger: GGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTG...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCTACACCAGTGTAATTTaGAACGTACAGACGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LSGPQAIPSAQALPHESRYTSVI*NVQTVE
Trigger: TTCCACCGTCTGTACGTTTCAAATTACACTGGTGTA...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR TCA 90 bp GCCACTGCCCCAAGAGTTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCTCATTTTCTAGATaGGGAGTTGTCTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: ATAPRVEWATSNPQCPGASSFSR*GVVFSM
Trigger: CATGGAGAAGACAACTCCTCATCTAGAAAATGAGGA...AGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAACTCTTGGGGCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTTCTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTGTCCACTGTGGCACCTaGCACCAGCAGCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LLSNARSSSSVLGLLRQPVHCGT*HQQLVH
Trigger: GTGAACAAGCTGCTGGTGGCAGGTGCCACAGTGGAC...AGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTTCTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTCCCTTCCTTATCCTGTaGGTTCAGGTGGGCGCCACA +
Preference number: 4 (lower is better)
Translates to: LLSNARSSSSVLGLLRQPPFLIL*VQVGAT
Trigger: TGTGGCGCCCACCTGAACGCACAGGATAAGGAAGGG...AGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp ATAAGGGGACATAAGGGCCTCAGGCAAACTAGGGTTACGGGCCACTGCCCCAAGCCAGTACACAGTGGGTaGGAGGCTTCTCTCAAATGC +
Preference number: 4 (lower is better)
Translates to: IRGHKGLRQTRVTGHCPKPVHSG*EASLKC
Trigger: GCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGG...CTTGGGGCAGTGGCCCGTAACCCTAGTTTGCCTGAGGCCCTTATGTCCCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR GCA 90 bp CTTCTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTATGGTCTTGAACGCCTaGTTCGCCATGGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: LLSNARSSSSVLGLLRQPMVLNA*FAMAPA
Trigger: CGCTGGTGCCATGGCGAAGCAGGCGTTCAAGACCAT...AGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp TGGCTCCAGCTTGGGACTGCTCCCTTAAGGCTCGTTCTTGGCCCTCACTCTCCTTTAAGATTCACTTTCTaGCGTTTAGGGGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: WLQLGTAPLRLVLGPHSPLRFTF*RLGAQP
Trigger: GGGCTGGGCCCCTAAACGCCAGAAAGTGAATCTTAA...AGGAGAGTGAGGGCCAAGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp TTGAGTGGGCCACAAGCAATCCCCAGTGCCCAGGCGCTTCCCCATGAGAGCCGCGACGAAAAGGAACCATaGCCAAATGCCTATCAATCA +
Preference number: 4 (lower is better)
Translates to: LSGPQAIPSAQALPHESRDEKEP*PNAYQS
Trigger: TGATTGATAGGCATTTGGCCATGGTTCCTTTTCGTC...GCGGCTCTCATGGGGAAGCGCCTGGGCACTGGGGATTGCTTGTGGCCCACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp AGTGTCCTGGCCTCCCAGGTGGGATCAAGCAGGGTGGGTGCAGCTGCAGCGTTCGACGAAAAGGAACCATaGCCAAATGCCTATCAATCA +
Preference number: 4 (lower is better)
Translates to: SVLASQVGSSRVGAAAAFDEKEP*PNAYQS
Trigger: TGATTGATAGGCATTTGGCCATGGTTCCTTTTCGTC...GAACGCTGCAGCTGCACCCACCCTGCTTGATCCCACCTGGGAGGCCAGGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTTGCAAGGCGGTGCGGTaGAGCTTGTCATGGGCATTG +
Preference number: 4 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSCKAVR*SLSWAL
Trigger: CAATGCCCATGACAAGCTCCACCGCACCGCCTTGCA...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR TCA 90 bp CGGGGCCAGTACACAGTGGGTGCGAGGCTTCTCTCAAATGCGCGCTCCAGCTCACGCTTTTTCCGTCTTTaGACCAAGTTTTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: RGQYTVGARLLSNARSSSRFFRL*TKFSKS
Trigger: TGACTTGGAAAACTTGGTTCAAAGACGGAAAAAGCG...TGAGCTGGAGCGCGCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGGCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CCACACACACAGACTGGCCCTGGAGAGAGCAAGGCAAGCCCCCTAACCTGGGACTACACCAGTGTAATTTaGAACGTACAGACGGTGGAA +
Preference number: 4 (lower is better)
Translates to: PHTQTGPGESKASPLTWDYTSVI*NVQTVE
Trigger: TTCCACCGTCTGTACGTTTCAAATTACACTGGTGTA...GTCCCAGGTTAGGGGGCTTGCCTTGCTCTCTCCAGGGCCAGTCTGTGTGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTGCTCCAGCTTGGGACTaGTCCCTTAAGGCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSAPAWD*SLKARS
Trigger: AGAACGAGCCTTAAGGGAGCAGTCCCAAGCTGGAGC...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ACCATGGCCAAATGCCTATCAATCAGCCCGGTACCTAATGTAACCCAGGACCCATGGGTGGCTCCAGCTTaGGACTGCTCCCTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: TMAKCLSISPVPNVTQDPWVAPA*DCSLKA
Trigger: AGCCTTAAGGGAGCAGTCCCAAGCTGGAGCCACCCA...TGGGTCCTGGGTTACATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTGGACTTCTGTTGCTGTaGGGCCTCAAACCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSGLLLL*GLKPVE
Trigger: CTCAACAGGTTTGAGGCCCCACAGCAACAGAAGTCC...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR CCA 90 bp ACCATGGCCAAATGCCTATCAATCAGCCCGGTACCTAATGTAACCCAGGACCCACAACCTAGTGGGTCCTaGACTTCTGTTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TMAKCLSISPVPNVTQDPQPSGS*TSVAVG
Trigger: CCCCACAGCAACAGAAGTCCAGGACCCACTAGGTTG...TGGGTCCTGGGTTACATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR TCA 90 bp CTTCTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTCCTCCAGAGTTCCTATaGCCAAAGTTGTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: LLSNARSSSSVLGLLRQPPPEFL*PKLSRA
Trigger: GGCTCTAGACAACTTTGGTCATAGGAACTCTGGAGG...AGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp CTGGCGTTTAGGGGCCCAGCCCCACCAGCAGTACAGGCCTACACCAGTGTAATTTCCTCATTTTCTAGATaGGGAGTTGTCTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LAFRGPAPPAVQAYTSVISSFSR*GVVFSM
Trigger: CATGGAGAAGACAACTCCTCATCTAGAAAATGAGGA...AATTACACTGGTGTAGGCCTGTACTGCTGGTGGGGCTGGGCCCCTAAACGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp TTTAGGGCAGAGCTTCTTAAGATTCACTTTCTGGCGTTTAGGGGCCCAGCCCCAGAGGCTTCTCTCAAATaGGCGCTCCAGCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: FRAELLKIHFLAFRGPAPEASLK*ALQLIS
Trigger: ACTGATGAGCTGGAGCGCGCATTTGAGAGAAGCCTC...TGGGGCTGGGCCCCTAAACGCCAGAAAGTGAATCTTAAGAAGCTCTGCCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp ACCATGGCCAAATGCCTATCAATCAGCCCGGTACCTAATGTAACCCAGGACCCAGAGGCTTCTCTCAAATaGGCGCTCCAGCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: TMAKCLSISPVPNVTQDPEASLK*ALQLIS
Trigger: ACTGATGAGCTGGAGCGCGCATTTGAGAGAAGCCTC...TGGGTCCTGGGTTACATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR GCA 90 bp TTTAGGGCAGAGCTTCTTAAGATTCACTTTCTGGCGTTTAGGGGCCCAGCCCCACCAGTACACAGTGGGTaGGAGGCTTCTCTCAAATGC +
Preference number: 4 (lower is better)
Translates to: FRAELLKIHFLAFRGPAPPVHSG*EASLKC
Trigger: GCATTTGAGAGAAGCCTCGCACCCACTGTGTACTGG...TGGGGCTGGGCCCCTAAACGCCAGAAAGTGAATCTTAAGAAGCTCTGCCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTGAAACGTACAGACGGTaGAAGAGGAAGTCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSETYRR*KRKSRE
Trigger: CTCCCTAGACTTCCTCTTCCACCGTCTGTACGTTTC...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR CCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTTCAATCAGGTACTCCTaGTTCTCAGCAGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSSIRYS*FSAAAF
Trigger: GAAGGCAGCTGCTGAGAACCAGGAGTACCTGATTGA...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS-3UTR TCA 90 bp CTTCTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTCCACTTACCAACTGCTaGATGCTGATGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: LLSNARSSSSVLGLLRQPPLTNC*MLMKSM
Trigger: CATGGACTTCATCAGCATTCAGCAGTTGGTAAGTGG...AGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS-3UTR TCA 90 bp TTTAGGGCAGAGCTTCTTAAGATTCACTTTCTGGCGTTTAGGGGCCCAGCCCCACCTCCAGAGTTCCTATaGCCAAAGTTGTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: FRAELLKIHFLAFRGPAPPPEFL*PKLSRA
Trigger: GGCTCTAGACAACTTTGGTCATAGGAACTCTGGAGG...TGGGGCTGGGCCCCTAAACGCCAGAAAGTGAATCTTAAGAAGCTCTGCCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000331001.2
CDS-3UTR TCA 90 bp CTCTCAAATGCGCGCTCCAGCTCATCAGTCTTAGGGCTTCTGAGGCAACCTAGTTCCTCATTTTCTAGATaGGGAGTTGTCTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LSNARSSSSVLGLLRQPSSSFSR*GVVFSM
Trigger: CATGGAGAAGACAACTCCTCATCTAGAAAATGAGGA...ACTAGGTTGCCTCAGAAGCCCTAAGACTGATGAGCTGGAGCGCGCATTTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS GCA 90 bp CGGGGATGCGCCACGTGGGCCTGCAGGGCCTCCCGGATGCCGCGCTaGCAGTCTCGAGCCAGCTGCACCGGGGTCACGGAGGCCGCGTTC +
Preference number: 5 (lower is better)
Translates to: RGCATWACRASRMPR*QSRASCTGVTEAAF
Trigger: GAACGCGGCCTCCGTGACCCCGGTGCAGCTGGCTCGAGACTGGCAGCGCGGCATCCGGGAGGCCCTGCAGGCCCACGTGGCGCATCCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
ENST00000482175.5
CDS-3UTR CAA 90 bp GACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCGGCGGGGCGGTGCGGTGGAGCTaGTCATGGGCATTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: DAGAGHRMEWWQCERRGGAVRWS*SWALGS
Trigger: GGACCCCAATGCCCATGACAAGCTCCACCGCACCGC...CCCGCCGCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS GCA 90 bp TCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTaGTCCACACCTCCCCACAGCCTCCCTGCAGGTGCTGTGTGGCCG +
Preference number: 5 (lower is better)
Translates to: SLRRVAPRRVAACCT*STPPHSLPAGAVWP
Trigger: CGGCCACACAGCACCTGCAGGGAGGCTGTGGGGAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS-3UTR CAA 90 bp GGTGCAGACGCGGGGGCGGGGCACAGGATGGAATGGTGGCAGTGCGAAAGGCGCAGCTTGTCATGGGCATaGGGGTCCCCTCCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: GADAGAGHRMEWWQCERRSLSWA*GSPPSV
Trigger: GACAGACGGAGGGGACCCCAATGCCCATGACAAGCT...GCGCCTTTCGCACTGCCACCATTCCATCCTGTGCCCCGCCCCCGCGTCTGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318357.9
ENST00000418232.5
CDS CCA 90 bp CTCCCGAAGGCCGCAGGTGCCCAAGATGTCACAGCTTCACCAGTCTaGCCCACGGGTCCCATGCAGCCCACCAAGGAACACTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LPKAAGAQDVTASPV*PTGPMQPTKEHCWL
Trigger: GAGCCAGCAGTGTTCCTTGGTGGGCTGCATGGGACCCGTGGGCCAGACTGGTGAAGCTGTGACATCTTGGGCACCTGCGGCCTTCGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482175.5
CDS CCA 90 bp TCCCAAGGACAGTCAGGCTGGGTGGCCCCACTCAGCTGCCCCGTGTaGACTGTCGCAGGAGAGCCTGTGTTTCCAGAGTCAGTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: SQGQSGWVAPLSCPV*TVAGEPVFPESVPL
Trigger: CAAGGGCACTGACTCTGGAAACACAGGCTCTCCTGCGACAGTCCACACGGGGCAGCTGAGTGGGGCCACCCAGCCTGACTGTCCTTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS TCA 90 bp AGGCCCACAGGCTCCACCTGGGCCTGGGACTGCGGCTGGTTCAGTTaGAGACAAGACCAAATCACTCCCGAAGGCCGCAGGTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: RPTGSTWAWDCGWFS*RQDQITPEGRRCPR
Trigger: TCTTGGGCACCTGCGGCCTTCGGGAGTGATTTGGTCTTGTCTTCAACTGAACCAGCCGCAGTCCCAGGCCCAGGTGGAGCCTGTGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482175.5
CDS GCA 90 bp CCAGCTCGGCCCCATAGAGCAGCAGTAGCTTCATGGCTTTGTAGCTaGCGTGCCGCACGGCCTCGTGCAGAGCCGTGTCCCCTTCCTTAT +
Preference number: 5 (lower is better)
Translates to: PARPHRAAVASWLCS*RAARPRAEPCPLPY
Trigger: ATAAGGAAGGGGACACGGCTCTGCACGAGGCCGTGCGGCACGGCAGCTACAAAGCCATGAAGCTACTGCTGCTCTATGGGGCCGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS TCA 90 bp TGCTCCACACCTCCCCACAGCCTCCCTGCAGGTGCTGTGTGGCCGTaGTGTGCAGAGAGCAGTGAGGGAGGGTTCATGAACCAGGTGGAT +
Preference number: 5 (lower is better)
Translates to: CSTPPHSLPAGAVWP*CAESSEGGFMNQVD
Trigger: ATCCACCTGGTTCATGAACCCTCCCTCACTGCTCTCTGCACATCACGGCCACACAGCACCTGCAGGGAGGCTGTGGGGAGGTGTGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS GCA 90 bp AGGAAATCCTCCCAAGGACAGTCAGGCTGGGTGGCCCCACTCAGCTaGCCCGTGTGGACTGTCGCAGGAGAGCCTGTGTTTCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: RKSSQGQSGWVAPLS*PVWTVAGEPVFPES
Trigger: TGACTCTGGAAACACAGGCTCTCCTGCGACAGTCCACACGGGGCAGCTGAGTGGGGCCACCCAGCCTGACTGTCCTTGGGAGGATTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS-3UTR CAA 90 bp ACCATGGCCAAATGCCTATCAATCAGCCCGGTACCTAATGTAACCCAGGACCCAGCGGTGCGGTGGAGCTaGTCATGGGCATTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: TMAKCLSISPVPNVTQDPAVRWS*SWALGS
Trigger: GGACCCCAATGCCCATGACAAGCTCCACCGCACCGC...TGGGTCCTGGGTTACATTAGGTACCGGGCTGATTGATAGGCATTTGGCCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318357.9
CDS CCA 90 bp CCAGTCTGGCCCACGGGTCCCATGCAGCCCACCAAGGAACACTGCTaGCTCGTACTAATGCAGTTTCTTATTCTAATCCCACGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PVWPTGPMQPTKEHC*LVLMQFLILIPRQE
Trigger: CTCCTGGCGTGGGATTAGAATAAGAAACTGCATTAGTACGAGCCAGCAGTGTTCCTTGGTGGGCTGCATGGGACCCGTGGGCCAGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482175.5
CDS GCA 90 bp TGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGAAGAGGTCATaGCTGGGAGGAAGGGATCGTCATGCTGCATCGAATCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CHSQCCQFPCSEKRS*LGGRDRHAASNPLS
Trigger: GGAGAGAGGATTCGATGCAGCATGACGATCCCTTCCTCCCAGGCATGACCTCTTCTCAGAACACGGGAACTGACAACACTGCGAGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS GCA 90 bp GAGGCATTTGTGTTCTCCACTGGAGGGAGGCATCCTTGTCTAAACTaGATCCATGTCATGGAGGTGCACGGACCTGGAGCTGGATCCCAG +
Preference number: 5 (lower is better)
Translates to: EAFVFSTGGRHPCLN*IHVMEVHGPGAGSQ
Trigger: CTGGGATCCAGCTCCAGGTCCGTGCACCTCCATGACATGGATGCAGTTTAGACAAGGATGCCTCCCTCCAGTGGAGAACACAAATGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS TCA 90 bp AGATCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTaGGAAGAGGTCATGCCTGGGAGGAAGGGATCGTCATGCTGCATC +
Preference number: 5 (lower is better)
Translates to: RSAELPLAVLSVPVF*EEVMPGRKGSSCCI
Trigger: GATGCAGCATGACGATCCCTTCCTCCCAGGCATGACCTCTTCTCAGAACACGGGAACTGACAACACTGCGAGTGGCAACTCAGCAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS TCA 90 bp GTTTCCAGAGTCAGTGCCCTTGTTAGCCTGCATGTGCAGGCTGGCTaGTGTGTGAGGCATTTGTGTTCTCCACTGGAGGGAGGCATCCTT +
Preference number: 5 (lower is better)
Translates to: VSRVSALVSLHVQAG*CVRHLCSPLEGGIL
Trigger: AAGGATGCCTCCCTCCAGTGGAGAACACAAATGCCTCACACATCAGCCAGCCTGCACATGCAGGCTAACAAGGGCACTGACTCTGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS GCA 72 bp GCCTCCCGGATGCCGCGCTGCCAGTCTCGAGCCAGCTaGACCGGGGTCACGGAGGCCGCGTTCCGCACCCCC +
Preference number: 6 (lower is better)
Translates to: ASRMPRCQSRAS*TGVTEAAFRTP
Trigger: GGGGGTGCGGAACGCGGCCTCCGTGACCCCGGTGCAGCTGGCTCGAGACTGGCAGCGCGGCATCCGGGAGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
ENST00000482175.5
CDS TCA 72 bp GCTTATCCTGTGCGTTCAGGTGGGCGCCACACTCGATaGGGTGCTCCAGGCAGTCGGGGTGCCGGGTGCGCA +
Preference number: 6 (lower is better)
Translates to: AYPVRSGGRHTR*GAPGSRGAGCA
Trigger: TGCGCACCCGGCACCCCGACTGCCTGGAGCACCTCATCGAGTGTGGCGCCCACCTGAACGCACAGGATAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482175.5
CDS TCA 72 bp TCTTATCCTGTGCGTTCAGGTGGGCGCCACACTCGATaGGGTGCTCCAGGCAGTCGGGGTGCCGGGTGCGCA +
Preference number: 6 (lower is better)
Translates to: SYPVRSGGRHTR*GAPGSRGAGCA
Trigger: TGCGCACCCGGCACCCCGACTGCCTGGAGCACCTCATCGAGTGTGGCGCCCACCTGAACGCACAGGATAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS CCA 72 bp GCCGCAGGTGCCCAAGATGTCACAGCTTCACCAGTCTaGCCCACGGGTCCCATGCAGCCCACCAAGGAACAC +
Preference number: 6 (lower is better)
Translates to: AAGAQDVTASPV*PTGPMQPTKEH
Trigger: GTGTTCCTTGGTGGGCTGCATGGGACCCGTGGGCCAGACTGGTGAAGCTGTGACATCTTGGGCACCTGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482175.5
CDS CCA 72 bp GCCGTGTCCCCTTCCTGCTTATCCTGTGCGTTCAGGTaGGCGCCACACTCGATGAGGTGCTCCAGGCAGTCG +
Preference number: 6 (lower is better)
Translates to: AVSPSCLSCAFR*APHSMRCSRQS
Trigger: CGACTGCCTGGAGCACCTCATCGAGTGTGGCGCCCACCTGAACGCACAGGATAAGCAGGAAGGGGACACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482175.5
CDS TCA 72 bp GGCTCCACCTGGGCCTGGGACTGCGGCTGGTTCAGTTaGAGACAAGACCAAATCACTCCCGAAGGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: GSTWAWDCGWFS*RQDQITPEGRR
Trigger: CCTGCGGCCTTCGGGAGTGATTTGGTCTTGTCTTCAACTGAACCAGCCGCAGTCCCAGGCCCAGGTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482175.5
CDS CCA 72 bp AGAGCCGTGTCCCCTTCCTTATCCTGTGCGTTCAGGTaGGCGCCACACTCGATGAGGTGCTCCAGGCAGTCG +
Preference number: 6 (lower is better)
Translates to: RAVSPSLSCAFR*APHSMRCSRQS
Trigger: CGACTGCCTGGAGCACCTCATCGAGTGTGGCGCCCACCTGAACGCACAGGATAAGGAAGGGGACACGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000331001.2
ENST00000418232.5
CDS CCA 72 bp GACTTAGGAAATCCTCCCAAGGACAGTCAGGCTGGGTaGCCCCACTCAGCTGCCCCGTGTGGACTGTCGCAG +
Preference number: 6 (lower is better)
Translates to: DLGNPPKDSQAG*PHSAAPCGLSQ
Trigger: CTGCGACAGTCCACACGGGGCAGCTGAGTGGGGCCACCCAGCCTGACTGTCCTTGGGAGGATTTCCTAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS CAA 72 bp AGGCTCCACCTGGGCCTGGGACTGCGGCTGGTTCAGTaGAAGACAAGACCAAATCACTCCCGAAGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: RLHLGLGLRLVQ*KTRPNHSRRPQ
Trigger: CTGCGGCCTTCGGGAGTGATTTGGTCTTGTCTTCAACTGAACCAGCCGCAGTCCCAGGCCCAGGTGGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482175.5
CDS CCA 72 bp AGTGCAAGGCGGTGCGGTGGAGCTTGTCATGGGCATTaGGGTCCCCTCCGTCTGTCAAGTACTTGTCAATCA +
Preference number: 6 (lower is better)
Translates to: SARRCGGACHGH*GPLRLSSTCQS
Trigger: TGATTGACAAGTACTTGACAGACGGAGGGGACCCCAATGCCCATGACAAGCTCCACCGCACCGCCTTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318357.9
ENST00000418232.5
ENST00000462692.1
CDS CCA 72 bp CAAGGCGGTGCGGTGGAGTTGTCAATCAGGTACTCCTaGTTCTCAGCAGCTGCCTTCAGGAACATCTCCAGG +
Preference number: 6 (lower is better)
Translates to: QGGAVELSIRYS*FSAAAFRNISR
Trigger: CCTGGAGATGTTCCTGAAGGCAGCTGCTGAGAACCAGGAGTACCTGATTGACAACTCCACCGCACCGCCTTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS TCA 72 bp GTCAGTGCCCTTGTTAGCCTGCATGTGCAGGCTGGCTaGTGTGTGAGGCATTTGTGTTCTCCACTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: VSALVSLHVQAG*CVRHLCSPLEG
Trigger: TCCCTCCAGTGGAGAACACAAATGCCTCACACATCAGCCAGCCTGCACATGCAGGCTAACAAGGGCACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS GCA 72 bp GTGTTCTCCACTGGAGGGAGGCATCCTTGTCTAAACTaGATCCATGTCATGGAGGTGCACGGACCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: VFSTGGRHPCLN*IHVMEVHGPGA
Trigger: AGCTCCAGGTCCGTGCACCTCCATGACATGGATGCAGTTTAGACAAGGATGCCTCCCTCCAGTGGAGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476975.5
CDS GCA 72 bp TGGCCCACGGGTCCCATGCAGCCCACCAAGGAACACTaGTGGCTCGTACTAATGCAGTTTCTTATTCTAATC +
Preference number: 6 (lower is better)
Translates to: WPTGPMQPTKEH*WLVLMQFLILI
Trigger: GATTAGAATAAGAAACTGCATTAGTACGAGCCAGCAGTGTTCCTTGGTGGGCTGCATGGGACCCGTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482175.5
CDS CCA 72 bp CCCACGGGTCCCATGCAGCCCACCAAGGAACACTGCTaGCTCGTACTAATGCAGTTTCTTATTCTAATCCCA +
Preference number: 6 (lower is better)
Translates to: PTGPMQPTKEHC*LVLMQFLILIP
Trigger: TGGGATTAGAATAAGAAACTGCATTAGTACGAGCCAGCAGTGTTCCTTGGTGGGCTGCATGGGACCCGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482175.5