RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD22 (Homo sapiens)

Ensembl gene IDs: ENSG00000152766

Ensembl transcript IDs: ENST00000371930.5, ENST00000476963.1

Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCATCTGATGCAGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTaGGGCCGTATTGTGAAGCATCTGACACTGACGATCTTAGGACAA +
Preference number: 1 (lower is better)
Translates to: PSDAAGGDQPFPGTV*GRIVKHLTLTILGQ
Trigger: TTGTCCTAAGATCGTCAGTGTCAGATGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCTGCATCAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR TCA 90 bp GGGGTTTGGATGCTCCTCACCGTATGTACAATGAAATCATCCATCTaGTGCAGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGG +
Preference number: 1 (lower is better)
Translates to: GVWMLLTVCTMKSSI*CSRRRPTFPRDGVR
Trigger: CCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCTGCATCAGATGGATGATTTCATTGTACATACGGTGAGGAGCATCCAAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR TCA 90 bp CGTGGATTTCATCTGGGGTTTGGATGCTCCTCACCGTATGTACAATaGAATCATCCATCTGATGCAGCAGGAGGAGACCAACCTTTCCCA +
Preference number: 1 (lower is better)
Translates to: RGFHLGFGCSSPYVQ*NHPSDAAGGDQPFP
Trigger: TGGGAAAGGTTGGTCTCCTCCTGCTGCATCAGATGGATGATTTCATTGTACATACGGTGAGGAGCATCCAAACCCCAGATGAAATCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR CCA 90 bp CTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATaGGCTCACGTGGATTTCATCTGGGGTTTGGATGCTCCTCACCGT +
Preference number: 1 (lower is better)
Translates to: LSEVTNLIYHKNIPE*AHVDFIWGLDAPHR
Trigger: ACGGTGAGGAGCATCCAAACCCCAGATGAAATCCACGTGAGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR CCA 90 bp CCTGTAAGGTACAGAGTCAGAGATATGACGGTCCCTACAGCAATGTaGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAA +
Preference number: 1 (lower is better)
Translates to: PVRYRVRDMTVPTAM*TGGQDWLSNPEDVK
Trigger: TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGTAGGGACCGTCATATCTCTGACTCTGTACCTTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR TCA 90 bp CAATACTCAAAGGGGGCTGGGAGGAACAGTTTGTCTCCTAGGGCATaGCATAGACTGGACAGTCTTTTTATAAGAGTGATACAACTGGGA +
Preference number: 1 (lower is better)
Translates to: QYSKGAGRNSLSPRA*HRLDSLFIRVIQLG
Trigger: TCCCAGTTGTATCACTCTTATAAAAAGACTGTCCAGTCTATGTCATGCCCTAGGAGACAAACTGTTCCTCCCAGCCCCCTTTGAGTATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR CCA 90 bp ATCTACCATAAGAATATTCCTGAATGGGCTCACGTGGATTTCATCTaGGGTTTGGATGCTCCTCACCGTATGTACAATGAAATCATCCAT +
Preference number: 1 (lower is better)
Translates to: IYHKNIPEWAHVDFI*GLDAPHRMYNEIIH
Trigger: ATGGATGATTTCATTGTACATACGGTGAGGAGCATCCAAACCCCAGATGAAATCCACGTGAGCCCATTCAGGAATATTCTTATGGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR TCA 90 bp GATTTGTCAATTTGCCAATTTCTGTGGTGTAAACACACTCACCGCTaGCACTTGATAGATGTTTTTATTGAAATTCCTTCACCAAAGGAA +
Preference number: 1 (lower is better)
Translates to: DLSICQFLWCKHTHR*HLIDVFIEIPSPKE
Trigger: TTCCTTTGGTGAAGGAATTTCAATAAAAACATCTATCAAGTGTCAGCGGTGAGTGTGTTTACACCACAGAAATTGGCAAATTGACAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCACTTAGGACAACCTCCTaGGGGATGGGGCTAGGACCC +
Preference number: 2 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEALRTTS*GMGLGP
Trigger: GGGTCCTAGCCCCATCCCTCAGGAGGTTGTCCTAAG...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR GCA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCACTCAGGAAGCTGAGCTaGTTTAAGGACAACAACAAC +
Preference number: 2 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEALRKLS*FKDNNN
Trigger: GTTGTTGTTGTCCTTAAAGCAGCTCAGCTTCCTGAG...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTTTCCCAGGGACGGTGTaGGGCCGTATTGTGAAGCAT +
Preference number: 2 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAFPGTV*GRIVKH
Trigger: ATGCTTCACAATACGGCCTCACACCGTCCCTGGGAA...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAACTGCTCTCAAACTCCTaGGTTCAAGTGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKLLSNS*VQVILP
Trigger: TGGGAGGATCACTTGAACTCAGGAGTTTGAGAGCAG...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCAGTCTCTGCAACTCATTaGCAAACCATGATTTATTTC +
Preference number: 2 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEAVSATH*QTMIYF
Trigger: GAAATAAATCATGGTTTGTCAATGAGTTGCAGAGAC...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTACTACCTCAGGAAGCTaGGCTGCTTTAAGGACAACA +
Preference number: 2 (lower is better)
Translates to: GARTHEGRITESRDLVYITTSGS*AALRTT
Trigger: TGTTGTCCTTAAAGCAGCTCAGCTTCCTGAGGTAGT...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAAATGAAATCATCCATCTaGTGCAGCAGGAGGAGACCA +
Preference number: 2 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKMKSSI*CSRRRP
Trigger: TGGTCTCCTCCTGCTGCATCAGATGGATGATTTCAT...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTATACTCAAAGGGGGCTaGGAGGAACAGTTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAILKGG*EEQFVS
Trigger: GGAGACAAACTGTTCCTCCCAGCCCCCTTTGAGTAT...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTCACGTGGATTTCATCTaGGGTTTGGATGCTCCTCAC +
Preference number: 2 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAHVDFI*GLDAPH
Trigger: GTGAGGAGCATCCAAACCCCAGATGAAATCCACGTG...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAAAATTGGGACAGATATTaGGGTCTGGAGTCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKNWDRY*GLESVD
Trigger: ATCCACAGACTCCAGACCTCAATATCTGTCCCAATT...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp TACGGAGAGCAGAGACCTAGTATACATTTTTCAGATTCCCTGCACTTGGCACTATTGTCTCCTAGGGCATaGCATAGACTGGACAGTCTT +
Preference number: 2 (lower is better)
Translates to: YGEQRPSIHFSDSLHLALLSPRA*HRLDSL
Trigger: AAGACTGTCCAGTCTATGTCATGCCCTAGGAGACAA...TAGTGCCAAGTGCAGGGAATCTGAAAAATGTATACTAGGTCTCTGCTCTCCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR GCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTGGCTTAGTTCCTGTCTaGAGCTATGTGAGATTCAGT +
Preference number: 2 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAGLVPV*SYVRFS
Trigger: ACTGAATCTCACATAGCTGCAGACAGGAACTAAGCC...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CCA 90 bp TACAAAGAGGCTGGCTTAGTTCCTGTCTGCAGCTATGTGAGATTCAGTCTTGATGGCATCCAGGTTAAATaGCCCACAGACCAAAAGTCT +
Preference number: 2 (lower is better)
Translates to: YKEAGLVPVCSYVRFSLDGIQVK*PTDQKS
Trigger: AGACTTTTGGTCTGTGGGCCATTTAACCTGGATGCC...ATCAAGACTGAATCTCACATAGCTGCAGACAGGAACTAAGCCAGCCTCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAATCACCGTATGTACAATaGAATCATCCATCTGATGCA +
Preference number: 2 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKSPYVQ*NHPSDA
Trigger: TGCATCAGATGGATGATTTCATTGTACATACGGTGA...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR GCA 90 bp TATCCTTTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACAAGGGTCTCGCTGTGTTaGCCTGGCTGCTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: YPLILTKLMSDSLCNSLTRVSLC*PGCSQT
Trigger: AGTTTGAGAGCAGCCAGGGCAACACAGCGAGACCCT...TGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAAAGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CCA 90 bp TACGGAGAGCAGAGACCTAGTATACATTTTTCAGATTCCCTGCACTTGGCACTAATTTGCCAATTTCTGTaGTGTAAACACACTCACCGC +
Preference number: 2 (lower is better)
Translates to: YGEQRPSIHFSDSLHLALICQFL*CKHTHR
Trigger: GCGGTGAGTGTGTTTACACCACAGAAATTGGCAAAT...TAGTGCCAAGTGCAGGGAATCTGAAAAATGTATACTAGGTCTCTGCTCTCCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CCA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTTTGTTGAAGGTATACTaGTGTGTGAAATTCACTTGT +
Preference number: 2 (lower is better)
Translates to: GARTHEGRITESRDLVYILLKVY*CVKFTC
Trigger: ACAAGTGAATTTCACACACCAGTATACCTTCAACAA...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CCA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAAACAGATATTGAGGTCTaGAGTCTGTGGATTATTGTT +
Preference number: 2 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKTDIEV*SLWIIV
Trigger: AACAATAATCCACAGACTCCAGACCTCAATATCTGT...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTTTCTTCAGGAAAGACTaGGTTTGGAACACCAGGGCT +
Preference number: 2 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSIFFRKD*VWNTRA
Trigger: AGCCCTGGTGTTCCAAACTCAGTCTTTCCTGAAGAA...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp TACAAAGAGGCTGGCTTAGTTCCTGTCTGCAGCTATGTGAGATTCAGTCTTGATAGGAATATTTACTTGTaGATCTCTAAGCCCACACAC +
Preference number: 2 (lower is better)
Translates to: YKEAGLVPVCSYVRFSLDRNIYL*ISKPTH
Trigger: GTGTGTGGGCTTAGAGATTCACAAGTAAATATTCCT...ATCAAGACTGAATCTCACATAGCTGCAGACAGGAACTAAGCCAGCCTCTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp TACAAAGAGGCTGGCTTAGTTCCTGTCTGCAGCTATGTGAGATTCAGTCTTGATGTGAGACAGATATTTTaGTATTCGCAATCTCTCACT +
Preference number: 2 (lower is better)
Translates to: YKEAGLVPVCSYVRFSLDVRQIF*YSQSLT
Trigger: AGTGAGAGATTGCGAATATCAAAATATCTGTCTCAC...ATCAAGACTGAATCTCACATAGCTGCAGACAGGAACTAAGCCAGCCTCTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CCA 90 bp TATCCTTTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACACACATACAAAGAGGCTaGCTTAGTTCCTGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: YPLILTKLMSDSLCNSLTHIQRG*LSSCLQ
Trigger: CTGCAGACAGGAACTAAGCCAGCCTCTTTGTATGTG...TGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAAAGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGCTGTCTGCAGCTATGTaGGATTCAGTCTTGATTTTC +
Preference number: 2 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLLSAAM*DSVLIF
Trigger: GAAAATCAAGACTGAATCTCACATAGCTGCAGACAG...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR TCA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGAGGTATACTGGTGTGTaGAATTCACTTGTGTGGGTT +
Preference number: 2 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLRYTGV*NSLVWV
Trigger: AACCCACACAAGTGAATTTCACACACCAGTATACCT...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTTTGCTCAAACCAAGATaGCTTTTATTTGTAAACCGA +
Preference number: 2 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSILLKPR*LLFVNR
Trigger: TCGGTTTACAAATAAAAGCCATCTTGGTTTGAGCAA...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR TCA 72 bp GCAGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTaGGGCCGTATTGTGAAGCATCTGACACTGACGATC +
Preference number: 3 (lower is better)
Translates to: AAGGDQPFPGTV*GRIVKHLTLTI
Trigger: GATCGTCAGTGTCAGATGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCACATAGTTGCATAGTCTaGCTCAAACCAAGATGGCTT +
Preference number: 3 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEAHSCIV*LKPRWL
Trigger: AAGCCATCTTGGTTTGAGCAAGACTATGCAACTATG...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR TCA 72 bp ATGCTCCTCACCGTATGTACAATGAAATCATCCATCTaGTGCAGCAGGAGGAGACCAACCTTTCCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: MLLTVCTMKSSI*CSRRRPTFPRD
Trigger: GTCCCTGGGAAAGGTTGGTCTCCTCCTGCTGCATCAGATGGATGATTTCATTGTACATACGGTGAGGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR TCA 72 bp CATCTGGGGTTTGGATGCTCCTCACCGTATGTACAATaGAATCATCCATCTGATGCAGCAGGAGGAGACCAA +
Preference number: 3 (lower is better)
Translates to: HLGFGCSSPYVQ*NHPSDAAGGDQ
Trigger: TTGGTCTCCTCCTGCTGCATCAGATGGATGATTTCATTGTACATACGGTGAGGAGCATCCAAACCCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTTCTAGTCCAAGCTTGTaGGAAGGTTTACAGCTTGTT +
Preference number: 3 (lower is better)
Translates to: GARTHEGRITESRDLVYISSPSL*EGLQLV
Trigger: AACAAGCTGTAAACCTTCCAACAAGCTTGGACTAGA...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTGATTCTAGTCCAAGCTaGTTGGAAGGTTTACAGCTT +
Preference number: 3 (lower is better)
Translates to: GARTHEGRITESRDLVYIDSSPS*LEGLQL
Trigger: AAGCTGTAAACCTTCCAACAAGCTTGGACTAGAATC...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR CCA 72 bp TTCCTGAATGGGCTCACGTGGATTTCATCTGGGGTTTaGATGCTCCTCACCGTATGTACAATGAAATCATCC +
Preference number: 3 (lower is better)
Translates to: FLNGLTWISSGV*MLLTVCTMKSS
Trigger: GGATGATTTCATTGTACATACGGTGAGGAGCATCCAAACCCCAGATGAAATCCACGTGAGCCCATTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR CCA 72 bp TCATCTACCATAAGAATATTCCTGAATGGGCTCACGTaGATTTCATCTGGGGTTTGGATGCTCCTCACCGTA +
Preference number: 3 (lower is better)
Translates to: SSTIRIFLNGLT*ISSGVWMLLTV
Trigger: TACGGTGAGGAGCATCCAAACCCCAGATGAAATCCACGTGAGCCCATTCAGGAATATTCTTATGGTAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR CCA 72 bp GTGACCAACCTCATCTACCATAAGAATATTCCTGAATaGGCTCACGTGGATTTCATCTGGGGTTTGGATGCT +
Preference number: 3 (lower is better)
Translates to: VTNLIYHKNIPE*AHVDFIWGLDA
Trigger: AGCATCCAAACCCCAGATGAAATCCACGTGAGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAAAGCTTGGCAACCACCTaGTATTTACAAAAGGATCAT +
Preference number: 3 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKSLATT*YLQKDH
Trigger: ATGATCCTTTTGTAAATACAAGGTGGTTGCCAAGCT...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTCTAGACATTTTCACCTaGTTGCCACAGAGACATAAC +
Preference number: 3 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWALDIFT*LPQRHN
Trigger: GTTATGTCTCTGTGGCAACAAGGTGAAAATGTCTAG...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAAAGTGAGACAGATATTTaGATATTCGCAATCTCTCAC +
Preference number: 3 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKSETDI*IFAISH
Trigger: GTGAGAGATTGCGAATATCAAAATATCTGTCTCACT...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTATATATTCTACCATCTaGAAGGGTAGGTTTTACCTG +
Preference number: 3 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAIYSTI*KGRFYL
Trigger: CAGGTAAAACCTACCCTTCAAGATGGTAGAATATAT...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp TACGGAGAGCAGAGACCTAGTATACATTTTTCAGATTCCCTGCACTTGGCACTAACAAAACTAACAAGCTaGGCAACCACCTTGTATTTA +
Preference number: 3 (lower is better)
Translates to: YGEQRPSIHFSDSLHLALTKLTS*ATTLYL
Trigger: TAAATACAAGGTGGTTGCCAAGCTTGTTAGTTTTGT...TAGTGCCAAGTGCAGGGAATCTGAAAAATGTATACTAGGTCTCTGCTCTCCGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGTCAGATTCCCTGCACTaGGCACTAAATCCGACACTT +
Preference number: 3 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLSDSLH*ALNPTL
Trigger: AAGTGTCGGATTTAGTGCCAAGTGCAGGGAATCTGA...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTAAGCTAGGGAGAAAATaGCATAATGTCATGAGCATG +
Preference number: 3 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSIKLGRK*HNVMSM
Trigger: CATGCTCATGACATTATGCAATTTTCTCCCTAGCTT...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGAAGGTTTACAGCTTGTaGCTAGGAGACCTAATGACT +
Preference number: 3 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLKVYSL*LGDLMT
Trigger: AGTCATTAGGTCTCCTAGCAACAAGCTGTAAACCTT...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGCCAGATCCTACCTCATaGTATAGCTCTGTTTCTTTT +
Preference number: 3 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLPDPTS*YSSVSF
Trigger: AAAAGAAACAGAGCTATACAATGAGGTAGGATCTGG...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR-3UTR CAA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGGTCAAAAGTATATTGTaGAAGGTATACTGGTGTGTG +
Preference number: 3 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLVKSIL*KVYWCV
Trigger: CACACACCAGTATACCTTCAACAATATACTTTTGAC...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR TCA 72 bp ATTTGCCAATTTCTGTGGTGTAAACACACTCACCGCTaGCACTTGATAGATGTTTTTATTGAAATTCCTTCA +
Preference number: 3 (lower is better)
Translates to: ICQFLWCKHTHR*HLIDVFIEIPS
Trigger: TGAAGGAATTTCAATAAAAACATCTATCAAGTGTCAGCGGTGAGTGTGTTTACACCACAGAAATTGGCAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR GCA 72 bp CCTTTAATCTTGACAAAGTTAATGTCAGACAGTCTCTaGAACTCATTGACAAACCATGATTTATTTCTTCAG +
Preference number: 3 (lower is better)
Translates to: PLILTKLMSDSL*NSLTNHDLFLQ
Trigger: CTGAAGAAATAAATCATGGTTTGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAAAGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCATCACATGCCCTCGCCTaGAAGCACAGATCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEASHALA*KHRSGA
Trigger: CGCCCCTGATCTGTGCTTGCAGGCGAGGGCATGTGA...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCAGAAACGATTCTCACATaGCCTCGCCTGCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEAETILT*PRLQAQ
Trigger: CTGTGCTTGCAGGCGAGGGCATGTGAGAATCGTTTC...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCACTTTATTGTGGGGTCTaGACGGGCTTCCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEALYCGV*TGFQEQ
Trigger: CTGCTCTTGGAAGCCCGTGCAGACCCCACAATAAAG...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCAAGAAGTCCAAGCTGGTaGCAAGCTCCAGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEARSPSW*QAPGVL
Trigger: AAGCACTCCTGGAGCTTGCCACCAGCTTGGACTTCT...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTCTTAGGACAACCTCCTaGGGGATGGGGCTAGGACCC +
Preference number: 4 (lower is better)
Translates to: GARTHEGRITESRDLVYILRTTS*GMGLGP
Trigger: GGGTCCTAGCCCCATCCCTCAGGAGGTTGTCCTAAG...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTTTCCCAGGGACGGTGTaGGGCCGTATTGTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: GARTHEGRITESRDLVYIFPGTV*GRIVKH
Trigger: ATGCTTCACAATACGGCCTCACACCGTCCCTGGGAA...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTAGGGTCTCGCTGTGTTaGCCTGGCTGCTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GARTHEGRITESRDLVYIRVSLC*PGCSQT
Trigger: AGTTTGAGAGCAGCCAGGGCAACACAGCGAGACCCT...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCAAGCCATCTTGAACGTTaGCATAGCTGCTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEASHLER*HSCCLL
Trigger: AAGAAGACAGCAGCTATGCCAACGTTCAAGATGGCT...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCACTGTCTGCAGCTATGTaGGATTCAGTCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEALSAAM*DSVLIF
Trigger: GAAAATCAAGACTGAATCTCACATAGCTGCAGACAG...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTGCAAACACCTGTCAGTaGTTTTCCAGCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GARTHEGRITESRDLVYIANTCQ*FSSSSG
Trigger: GCCTGAGCTGCTGGAAAAGCACTGACAGGTGTTTGC...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCACTAGTCCAAGCTTGTTaGAAGGTTTACAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEALVQAC*KVYSLL
Trigger: CAACAAGCTGTAAACCTTCCAACAAGCTTGGACTAG...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCAATTCTGCTTTGTCTTTaGTACCATGAGGAAATACCC +
Preference number: 4 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEAILLCL*YHEEIP
Trigger: GGGTATTTCCTCATGGTATCAAAGACAAAGCAGAAT...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTGTCCCTACAGCAATGTaGACAGGAGGTCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAVPTAM*TGGQDW
Trigger: CCAGTCCTGACCTCCTGTCCACATTGCTGTAGGGAC...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp TACAAAGAGGCTGGCTTAGTTCCTGTCTGCAGCTATGTGAGATTCAGTCTTGATGAGAGCCCAGCCCAATaGAACAAAGGCACTGGTGTC +
Preference number: 4 (lower is better)
Translates to: YKEAGLVPVCSYVRFSLDESPAQ*NKGTGV
Trigger: GACACCAGTGCCTTTGTTTCATTGGGCTGGGCTCTC...ATCAAGACTGAATCTCACATAGCTGCAGACAGGAACTAAGCCAGCCTCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAAATACTCAAAGGGGGCTaGGAGGAACAGTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKILKGG*EEQFVS
Trigger: GGAGACAAACTGTTCCTCCCAGCCCCCTTTGAGTAT...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAATTCTTCAGGAAAGACTaGGTTTGGAACACCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKFFRKD*VWNTRA
Trigger: AGCCCTGGTGTTCCAAACTCAGTCTTTCCTGAAGAA...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAATTGTCTCCTAGGGCATaGCATAGACTGGACAGTCTT +
Preference number: 4 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKLSPRA*HRLDSL
Trigger: AAGACTGTCCAGTCTATGTCATGCCCTAGGAGACAA...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTAATTGGGACAGATATTaGGGTCTGGAGTCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: GARTHEGRITESRDLVYINWDRY*GLESVD
Trigger: ATCCACAGACTCCAGACCTCAATATCTGTCCCAATT...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAAACAGAGTCAGAGATATaGCGGTCCCTACAGCAATGT +
Preference number: 4 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKTESEI*RSLQQC
Trigger: ACATTGCTGTAGGGACCGTCATATCTCTGACTCTGT...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAAGGCATCCAGGTTAAATaGCCCACAGACCAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKGIQVK*PTDQKS
Trigger: AGACTTTTGGTCTGTGGGCCATTTAACCTGGATGCC...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTCCGTGCAATATCCAGTaGGCTCTCACCATGCTTATT +
Preference number: 4 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAPCNIQ*ALTMLI
Trigger: AATAAGCATGGTGAGAGCTCACTGGATATTGCACGG...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTATGAAATCATCCATCTaGTGCAGCAGGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAMKSSI*CSRRRP
Trigger: TGGTCTCCTCCTGCTGCATCAGATGGATGATTTCAT...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTCAAATCCAGAAGACGTaGAAATGCTGCTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAQIQKT*KCCSLR
Trigger: CCTCAGAGAGCAGCATTTTCACGTCTTCTGGATTTG...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTAGTGAGCTCTCACCATaGTTATTCTTTATTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GARTHEGRITESRDLVYISELSP*LFFIVG
Trigger: CCCCACAATAAAGAATAAGCATGGTGAGAGCTCACT...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTGCTTATTCTTTATTGTaGGGTCTGCACGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAAYSLL*GLHGLP
Trigger: TGGAAGCCCGTGCAGACCCCACAATAAAGAATAAGC...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp TACAAAGAGGCTGGCTTAGTTCCTGTCTGCAGCTATGTGAGATTCAGTCTTGATCTGAATGGGCTCACGTaGATTTCATCTGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: YKEAGLVPVCSYVRFSLDLNGLT*ISSGVW
Trigger: CCAAACCCCAGATGAAATCCACGTGAGCCCATTCAG...ATCAAGACTGAATCTCACATAGCTGCAGACAGGAACTAAGCCAGCCTCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTATTTGCCAATTTCTGTaGTGTAAACACACTCACCGC +
Preference number: 4 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAICQFL*CKHTHR
Trigger: GCGGTGAGTGTGTTTACACCACAGAAATTGGCAAAT...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTCTGCTCTCAAACTCCTaGGTTCAAGTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSILLSNS*VQVILP
Trigger: TGGGAGGATCACTTGAACTCAGGAGTTTGAGAGCAG...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTAGGAATATTTACTTGTaGATCTCTAAGCCCACACAC +
Preference number: 4 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWARNIYL*ISKPTH
Trigger: GTGTGTGGGCTTAGAGATTCACAAGTAAATATTCCT...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp TACGGAGAGCAGAGACCTAGTATACATTTTTCAGATTCCCTGCACTTGGCACTAAGGTATACTGGTGTGTaGAATTCACTTGTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: YGEQRPSIHFSDSLHLALRYTGV*NSLVWV
Trigger: AACCCACACAAGTGAATTTCACACACCAGTATACCT...TAGTGCCAAGTGCAGGGAATCTGAAAAATGTATACTAGGTCTCTGCTCTCCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp TATCCTTTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACACCTAGAAGTCCAAGCTaGTGGCAAGCTCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: YPLILTKLMSDSLCNSLTPRSPS*WQAPGV
Trigger: CACTCCTGGAGCTTGCCACCAGCTTGGACTTCTAGG...TGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAAAGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp TACGGAGAGCAGAGACCTAGTATACATTTTTCAGATTCCCTGCACTTGGCACTATCACCGTATGTACAATaGAATCATCCATCTGATGCA +
Preference number: 4 (lower is better)
Translates to: YGEQRPSIHFSDSLHLALSPYVQ*NHPSDA
Trigger: TGCATCAGATGGATGATTTCATTGTACATACGGTGA...TAGTGCCAAGTGCAGGGAATCTGAAAAATGTATACTAGGTCTCTGCTCTCCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp TACGGAGAGCAGAGACCTAGTATACATTTTTCAGATTCCCTGCACTTGGCACTAATGTCAGACAGTCTCTaGAACTCATTGACAAACCAT +
Preference number: 4 (lower is better)
Translates to: YGEQRPSIHFSDSLHLALMSDSL*NSLTNH
Trigger: ATGGTTTGTCAATGAGTTGCAGAGACTGTCTGACAT...TAGTGCCAAGTGCAGGGAATCTGAAAAATGTATACTAGGTCTCTGCTCTCCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTCATCTGGGGTTTGGATaGTCCTCACCGTATGTACAA +
Preference number: 4 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSIHLGFG*SSPYVQ
Trigger: TTGTACATACGGTGAGGAGCATCCAAACCCCAGATG...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTACCTCTACAGCTCCTTaGATCTTCTGGAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSITSTAP*IFWRYF
Trigger: GAAATACCTCCAGAAGATTCAAGGAGCTGTAGAGGT...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGGTCATTCTGATAGGCTaGTTGGCAGATGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLVILIG*LADGLR
Trigger: TCTGAGCCCATCTGCCAAGCAGCCTATCAGAATGAC...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp TTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACAAACCATGAACGTTGGCATAGCTaGTGTCTTCTTTCACCCACC +
Preference number: 4 (lower is better)
Translates to: LILTKLMSDSLCNSLTNHERWHS*CLLSPT
Trigger: GGTGGGTGAAAGAAGACAGCAGCTATGCCAACGTTC...ATGGTTTGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTGGCTTAGTTCCTGTCTaGAGCTATGTGAGATTCAGT +
Preference number: 4 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSIGLVPV*SYVRFS
Trigger: ACTGAATCTCACATAGCTGCAGACAGGAACTAAGCC...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTCTCAGGAAGCTGAGCTaGTTTAAGGACAACAACAAC +
Preference number: 4 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSILRKLS*FKDNNN
Trigger: GTTGTTGTTGTCCTTAAAGCAGCTCAGCTTCCTGAG...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTATAGGATTCCCATGCTaGTCCTTCACAGGCTTACTT +
Preference number: 4 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSIIGFPC*SFTGLL
Trigger: AAGTAAGCCTGTGAAGGACCAGCATGGGAATCCTAT...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp TACAAAGAGGCTGGCTTAGTTCCTGTCTGCAGCTATGTGAGATTCAGTCTTGATCAGGTTCTCTCTTTCTaGTTTTTGAGGTTGACATTA +
Preference number: 4 (lower is better)
Translates to: YKEAGLVPVCSYVRFSLDQVLSF*FLRLTL
Trigger: TAATGTCAACCTCAAAAACCAGAAAGAGAGAACCTG...ATCAAGACTGAATCTCACATAGCTGCAGACAGGAACTAAGCCAGCCTCTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTTTGCTCAAACCAAGATaGCTTTTATTTGTAAACCGA +
Preference number: 4 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWALLKPR*LLFVNR
Trigger: TCGGTTTACAAATAAAAGCCATCTTGGTTTGAGCAA...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTATTTCATCTGGGGTTTaGATGCTCCTCACCGTATGT +
Preference number: 4 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSIISSGV*MLLTVC
Trigger: ACATACGGTGAGGAGCATCCAAACCCCAGATGAAAT...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp TTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACAAACCATCACGTGGATTTCATCTaGGGTTTGGATGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LILTKLMSDSLCNSLTNHHVDFI*GLDAPH
Trigger: GTGAGGAGCATCCAAACCCCAGATGAAATCCACGTG...ATGGTTTGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp TTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACAAACCATGAAAATGCTGCTCTCTaGGGTGACCAACCTCATCTA +
Preference number: 4 (lower is better)
Translates to: LILTKLMSDSLCNSLTNHENAAL*GDQPHL
Trigger: TAGATGAGGTTGGTCACCTCAGAGAGCAGCATTTTC...ATGGTTTGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
3UTR CAA 72 bp ATTCTAGTCCAAGCTTGTTGGAAGGTTTACAGCTTGTaGCTAGGAGACCTAATGACTAAAAATTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ILVQACWKVYSL*LGDLMTKNFWL
Trigger: GAGCCAGAAATTTTTAGTCATTAGGTCTCCTAGCAACAAGCTGTAAACCTTCCAACAAGCTTGGACTAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp TTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACAAACCATAGTATAGGATTCCCATaGTGGTCCTTCACAGGCTTA +
Preference number: 4 (lower is better)
Translates to: LILTKLMSDSLCNSLTNHSIGFP*WSFTGL
Trigger: TAAGCCTGTGAAGGACCAGCATGGGAATCCTATACT...ATGGTTTGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR GCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTACAAGAGCCTCATTCTaGTTTGTCTTTGATACCATG +
Preference number: 4 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSITRASF*FVFDTM
Trigger: CATGGTATCAAAGACAAAGCAGAATGAGGCTCTTGT...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTACAGATATTGAGGTCTaGAGTCTGTGGATTATTGTT +
Preference number: 4 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSITDIEV*SLWIIV
Trigger: AACAATAATCCACAGACTCCAGACCTCAATATCTGT...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTTTGTTGAAGGTATACTaGTGTGTGAAATTCACTTGT +
Preference number: 4 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSILLKVY*CVKFTC
Trigger: ACAAGTGAATTTCACACACCAGTATACCTTCAACAA...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CCA 90 bp TATCCTTTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACAAAGAATATTCCTGAATaGGCTCACGTGGATTTCATC +
Preference number: 4 (lower is better)
Translates to: YPLILTKLMSDSLCNSLTKNIPE*AHVDFI
Trigger: GATGAAATCCACGTGAGCCCATTCAGGAATATTCTT...TGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAAAGGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp TTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACAAACCATGTGAGACAGATATTTTaGTATTCGCAATCTCTCACT +
Preference number: 4 (lower is better)
Translates to: LILTKLMSDSLCNSLTNHVRQIF*YSQSLT
Trigger: AGTGAGAGATTGCGAATATCAAAATATCTGTCTCAC...ATGGTTTGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR TCA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGGTCTCTGCAACTCATTaGCAAACCATGATTTATTTC +
Preference number: 4 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLVSATH*QTMIYF
Trigger: GAAATAAATCATGGTTTGTCAATGAGTTGCAGAGAC...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS GCA 90 bp AGAGGAAAGTCCCTAGAAGTCCAAGCTGGTGGCAAGCTCCAGGAGTaGTTTTCTAGCAAACACCTGTCAGTGCTTTTCCAGCAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RGKSLEVQAGGKLQE*FSSKHLSVLFQQLR
Trigger: CCTGAGCTGCTGGAAAAGCACTGACAGGTGTTTGCTAGAAAAGCACTCCTGGAGCTTGCCACCAGCTTGGACTTCTAGGGACTTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTACTTGTGTGGGTTTTTaGTCCCCAAGGGTCACCTGG +
Preference number: 5 (lower is better)
Translates to: GARTHEGRITESRDLVYITCVGF*SPRVTW
Trigger: CCAGGTGACCCTTGGGGACAAAAAACCCACACAAGT...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCAAAGGTTTACAGCTTGTaGCTAGGAGACCTAATGACT +
Preference number: 5 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEAKVYSL*LGDLMT
Trigger: AGTCATTAGGTCTCCTAGCAACAAGCTGTAAACCTT...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp AGCAGGAGGAGACCAACCTTTCCCAGGGACGGTGTGAGGCCGTATTGTGAAGCATCTAGTCCAAGCTTGTaGGAAGGTTTACAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: SRRRPTFPRDGVRPYCEASSPSL*EGLQLV
Trigger: AACAAGCTGTAAACCTTCCAACAAGCTTGGACTAGA...TGCTTCACAATACGGCCTCACACCGTCCCTGGGAAAGGTTGGTCTCCTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTCATGCTTATTCTTTATaGTGGGGTCTGCACGGGCTT +
Preference number: 5 (lower is better)
Translates to: GARTHEGRITESRDLVYIHAYSL*WGLHGL
Trigger: AAGCCCGTGCAGACCCCACAATAAAGAATAAGCATG...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp ACAGCAATGTGGACAGGAGGTCAGGACTGGCTTTCAAATCCAGAAGACGTGAAATCAGATTCCCTGCACTaGGCACTAAATCCGACACTT +
Preference number: 5 (lower is better)
Translates to: TAMWTGGQDWLSNPEDVKSDSLH*ALNPTL
Trigger: AAGTGTCGGATTTAGTGCCAAGTGCAGGGAATCTGA...TTTCACGTCTTCTGGATTTGAAAGCCAGTCCTGACCTCCTGTCCACATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp GGGGCTAGGACCCATGAAGGCAGAATTACGGAGAGCAGAGACCTAGTATACATTCCAGATCCTACCTCATaGTATAGCTCTGTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: GARTHEGRITESRDLVYIPDPTS*YSSVSF
Trigger: AAAAGAAACAGAGCTATACAATGAGGTAGGATCTGG...AATGTATACTAGGTCTCTGCTCTCCGTAATTCTGCCTTCATGGGTCCTAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTTGGAAGGTTTACAGCTaGTTGCTAGGAGACCTAATG +
Preference number: 5 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAWKVYS*LLGDLM
Trigger: CATTAGGTCTCCTAGCAACAAGCTGTAAACCTTCCA...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp TACGGAGAGCAGAGACCTAGTATACATTTTTCAGATTCCCTGCACTTGGCACTAGATTCTAGTCCAAGCTaGTTGGAAGGTTTACAGCTT +
Preference number: 5 (lower is better)
Translates to: YGEQRPSIHFSDSLHLALDSSPS*LEGLQL
Trigger: AAGCTGTAAACCTTCCAACAAGCTTGGACTAGAATC...TAGTGCCAAGTGCAGGGAATCTGAAAAATGTATACTAGGTCTCTGCTCTCCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp CTGCTCTCTGAGGTGACCAACCTCATCTACCATAAGAATATTCCTGAATGGGCTGTCAAAAGTATATTGTaGAAGGTATACTGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LLSEVTNLIYHKNIPEWAVKSIL*KVYWCV
Trigger: CACACACCAGTATACCTTCAACAATATACTTTTGAC...AGCCCATTCAGGAATATTCTTATGGTAGATGAGGTTGGTCACCTCAGAGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp TACGGAGAGCAGAGACCTAGTATACATTTTTCAGATTCCCTGCACTTGGCACTAAAGCTAGGGAGAAAATaGCATAATGTCATGAGCATG +
Preference number: 5 (lower is better)
Translates to: YGEQRPSIHFSDSLHLALKLGRK*HNVMSM
Trigger: CATGCTCATGACATTATGCAATTTTCTCCCTAGCTT...TAGTGCCAAGTGCAGGGAATCTGAAAAATGTATACTAGGTCTCTGCTCTCCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGCACCCACCGCCACACTaGTCCAAAGTCATTCTGATA +
Preference number: 5 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLHPPPH*SKVILI
Trigger: TATCAGAATGACTTTGGACAAGTGTGGCGGTGGGTG...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp TCTAACACCCATGTACCCTTCACCACAACAGATGGCATGTTTATTATGTCTATTTCCATTAAAGCCATCTaGAACGTTGGCATAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SNTHVPFTTTDGMFIMSISIKAI*NVGIAA
Trigger: AGCAGCTATGCCAACGTTCAAGATGGCTTTAATGGA...AATAGACATAATAAACATGCCATCTGTTGTGGTGAAGGGTACATGGGTGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp TACAAAGAGGCTGGCTTAGTTCCTGTCTGCAGCTATGTGAGATTCAGTCTTGATCTCTCTTTCTGGTTTTaGAGGTTGACATTAGCATTT +
Preference number: 5 (lower is better)
Translates to: YKEAGLVPVCSYVRFSLDLSFWF*RLTLAF
Trigger: AAATGCTAATGTCAACCTCAAAAACCAGAAAGAGAG...ATCAAGACTGAATCTCACATAGCTGCAGACAGGAACTAAGCCAGCCTCTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS CCA 90 bp TGTGGTCACAAGGATTACAATGCTTTCCTTAGCATTAATTCAATCTaGGAAAATTTTAATCTCCGTGCAATATCCAGTGAGCTCTCACCA +
Preference number: 5 (lower is better)
Translates to: CGHKDYNAFLSINSI*ENFNLRAISSELSP
Trigger: TGGTGAGAGCTCACTGGATATTGCACGGAGATTAAAATTTTCCCAGATTGAATTAATGCTAAGGAAAGCATTGTAATCCTTGTGACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371930.5
ENST00000476963.1
CDS-3UTR CAA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGCATAGTTGCATAGTCTaGCTCAAACCAAGATGGCTT +
Preference number: 5 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLHSCIV*LKPRWL
Trigger: AAGCCATCTTGGTTTGAGCAAGACTATGCAACTATG...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp TTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACAAACCATCTAGACATTTTCACCTaGTTGCCACAGAGACATAAC +
Preference number: 5 (lower is better)
Translates to: LILTKLMSDSLCNSLTNHLDIFT*LPQRHN
Trigger: GTTATGTCTCTGTGGCAACAAGGTGAAAATGTCTAG...ATGGTTTGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGAGCTTGGCAACCACCTaGTATTTACAAAAGGATCAT +
Preference number: 5 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLSLATT*YLQKDH
Trigger: ATGATCCTTTTGTAAATACAAGGTGGTTGCCAAGCT...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp TTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACAAACCATACAAAACTAACAAGCTaGGCAACCACCTTGTATTTA +
Preference number: 5 (lower is better)
Translates to: LILTKLMSDSLCNSLTNHTKLTS*ATTLYL
Trigger: TAAATACAAGGTGGTTGCCAAGCTTGTTAGTTTTGT...ATGGTTTGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp TATCCTTTAATCTTGACAAAGTTAATGTCAGACAGTCTCTGCAACTCATTGACAAGTGAGACAGATATTTaGATATTCGCAATCTCTCAC +
Preference number: 5 (lower is better)
Translates to: YPLILTKLMSDSLCNSLTSETDI*IFAISH
Trigger: GTGAGAGATTGCGAATATCAAAATATCTGTCTCACT...TGTCAATGAGTTGCAGAGACTGTCTGACATTAACTTTGTCAAGATTAAAGGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS-3UTR CAA 90 bp TTTGATCTAGCAAGTTATTACAGATATTATCCCCAGTCACAGAAGAAGAAACTGATATATTCTACCATCTaGAAGGGTAGGTTTTACCTG +
Preference number: 5 (lower is better)
Translates to: FDLASYYRYYPQSQKKKLIYSTI*KGRFYL
Trigger: CAGGTAAAACCTACCCTTCAAGATGGTAGAATATAT...CAGTTTCTTCTTCTGTGACTGGGGATAATATCTGTAATAACTTGCTAGATCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS CAA 90 bp TCGCCTGCAAGCACAGATCAGGGGCGTGTCTCCATTAAAGCCATCTaGAACGTTGGCATAGCTGCTGTCTTCTTTCACCCACCGCCACAC +
Preference number: 6 (lower is better)
Translates to: SPASTDQGRVSIKAI*NVGIAAVFFHPPPH
Trigger: GTGTGGCGGTGGGTGAAAGAAGACAGCAGCTATGCCAACGTTCAAGATGGCTTTAATGGAGACACGCCCCTGATCTGTGCTTGCAGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS GCA 72 bp AGCTCCAGGAGTGCTTTTCTAGCAAACACCTGTCAGTaGTTTTCCAGCAGCTCAGGCAGCAGCACACCTTCC +
Preference number: 6 (lower is better)
Translates to: SSRSAFLANTCQ*FSSSSGSSTPS
Trigger: GGAAGGTGTGCTGCTGCCTGAGCTGCTGGAAAAGCACTGACAGGTGTTTGCTAGAAAAGCACTCCTGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS CAA 90 bp TTGAACGTTGGCATAGCTGCTGTCTTCTTTCACCCACCGCCACACTaGTCCAAAGTCATTCTGATAGGCTGCTTGGCAGATGGGCTCAGA +
Preference number: 6 (lower is better)
Translates to: LNVGIAAVFFHPPPH*SKVILIGCLADGLR
Trigger: TCTGAGCCCATCTGCCAAGCAGCCTATCAGAATGACTTTGGACAAGTGTGGCGGTGGGTGAAAGAAGACAGCAGCTATGCCAACGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS CAA 72 bp GGCATAGCTGCTGTCTTCTTTCACCCACCGCCACACTaGTCCAAAGTCATTCTGATAGGCTGCTTGGCAGAT +
Preference number: 6 (lower is better)
Translates to: GIAAVFFHPPPH*SKVILIGCLAD
Trigger: ATCTGCCAAGCAGCCTATCAGAATGACTTTGGACAAGTGTGGCGGTGGGTGAAAGAAGACAGCAGCTATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS CAA 72 bp AGCACAGATCAGGGGCGTGTCTCCATTAAAGCCATCTaGAACGTTGGCATAGCTGCTGTCTTCTTTCACCCA +
Preference number: 6 (lower is better)
Translates to: STDQGRVSIKAI*NVGIAAVFFHP
Trigger: TGGGTGAAAGAAGACAGCAGCTATGCCAACGTTCAAGATGGCTTTAATGGAGACACGCCCCTGATCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371930.5
CDS CCA 72 bp AAGGATTACAATGCTTTCCTTAGCATTAATTCAATCTaGGAAAATTTTAATCTCCGTGCAATATCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: KDYNAFLSINSI*ENFNLRAISSE
Trigger: CTCACTGGATATTGCACGGAGATTAAAATTTTCCCAGATTGAATTAATGCTAAGGAAAGCATTGTAATCCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371930.5
ENST00000476963.1