Pregenerated sensors for ANKRD18A (Homo sapiens)
Ensembl gene IDs: ENSG00000180071Ensembl transcript IDs: ENST00000399703.6, ENST00000602295.5
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGAAAATCTTGCCAGATAGAGGGAAGAGGCGAAGGCAAAGATCCTaGGGTAACAAAGAGCCCTGCGGAGCTCTATTCTGTCCACTTTGG | + |
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Preference number: 1 (lower is better) Translates to: RKILPDRGKRRRQRS*GNKEPCGALFCPLW Trigger: CCAAAGTGGACAGAATAGAGCTCCGCAGGGCTCTTTGTTACCTCAGGATCTTTGCCTTCGCCTCTTCCCTCTATCTGGCAAGATTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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| 3UTR GCA 90 bp | GTGGAGGGGATACATAGGTTGATGACTGAAGGACGAGGAAAATCTTaGCAGATAGAGGGAAGAGGCGAAGGCAAAGATCCTGAGGTAACA | + |
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Preference number: 1 (lower is better) Translates to: VEGIHRLMTEGRGKS*QIEGRGEGKDPEVT Trigger: TGTTACCTCAGGATCTTTGCCTTCGCCTCTTCCCTCTATCTGGCAAGATTTTCCTCGTCCTTCAGTCATCAACCTATGTATCCCCTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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| 3UTR-3UTR GCA 90 bp | ACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATACTATTGAGCTACGGTAACAAAGAGCCCTaGGGAGCTCTATTCTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: TRYLQSFKVSPHKILLSYGNKEP*GALFCP Trigger: TGGACAGAATAGAGCTCCGCAGGGCTCTTTGTTACC...GTAGCTCAATAGTATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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| 3UTR-3UTR TCA 90 bp | AATACTATTGAGCTACAAGAAGAAAACCGTAACACTAGTATGGACAAACCTGGCCACACAAAATACTATTaGGCTACAAGAAGAAAACCG | + |
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Preference number: 2 (lower is better) Translates to: NTIELQEENRNTSMDKPGHTKYY*ATRRKP Trigger: CGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTG...GCCAGGTTTGTCCATACTAGTGTTACGGTTTTCTTCTTGTAGCTCAATAGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000399703.6 ENST00000602295.5 |
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| 3UTR CAA 90 bp | ACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATACTATaGAGCTACAAGAAGAAAACCGTAACACTAGTATGGACAAACCTG | + |
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Preference number: 2 (lower is better) Translates to: TRYLQSFKVSPHKIL*SYKKKTVTLVWTNL Trigger: CAGGTTTGTCCATACTAGTGTTACGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399703.6 ENST00000602295.5 |
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| 3UTR-3UTR TCA 90 bp | GTAACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATACTATTGAGCCACACAAAATACTATTaGGCTACAAGAAGAAAACCG | + |
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Preference number: 2 (lower is better) Translates to: VTRYLQSFKVSPHKILLSHTKYY*ATRRKP Trigger: CGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTG...GCTCAATAGTATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000399703.6 ENST00000602295.5 |
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| 3UTR TCA 72 bp | TTGCCAGATAGAGGGAAGAGGCGAAGGCAAAGATCCTaGGGTAACAAAGAGCCCTGCGGAGCTCTATTCTGT | + |
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Preference number: 3 (lower is better) Translates to: LPDRGKRRRQRS*GNKEPCGALFC Trigger: ACAGAATAGAGCTCCGCAGGGCTCTTTGTTACCTCAGGATCTTTGCCTTCGCCTCTTCCCTCTATCTGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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| 3UTR-3UTR CAA 90 bp | AACATACAGAAGGGACATCTATCCCACTTTTGTGTCAATATCATGGGCTTTCTGGAGGGGATACATAGGTaGATGACTGAAGGACGAGGA | + |
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Preference number: 3 (lower is better) Translates to: NIQKGHLSHFCVNIMGFLEGIHR*MTEGRG Trigger: TCCTCGTCCTTCAGTCATCAACCTATGTATCCCCTC...CAGAAAGCCCATGATATTGACACAAAAGTGGGATAGATGTCCCTTCTGTATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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| 3UTR CCA 72 bp | CATAGATACCATGACAGGTATACAGCAGGGCACTACTaGAACATACAGAAGGGACATCTATCCCACTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: HRYHDRYTAGHY*NIQKGHLSHFC Trigger: ACAAAAGTGGGATAGATGTCCCTTCTGTATGTTCCAGTAGTGCCCTGCTGTATACCTGTCATGGTATCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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| 3UTR CAA 72 bp | CTACTGGAACATACAGAAGGGACATCTATCCCACTTTaGTGTCAATATCATGGGCTTTCTGGTGGAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LLEHTEGTSIPL*CQYHGLSGGGD Trigger: ATCCCCTCCACCAGAAAGCCCATGATATTGACACAAAAGTGGGATAGATGTCCCTTCTGTATGTTCCAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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| 3UTR CAA 72 bp | AATATCATGGGCTTTCTGGTGGAGGGGATACATAGGTaGATGACTGAAGGACGAGGAAAATCTTGCCAGATA | + |
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Preference number: 4 (lower is better) Translates to: NIMGFLVEGIHR*MTEGRGKSCQI Trigger: TATCTGGCAAGATTTTCCTCGTCCTTCAGTCATCAACCTATGTATCCCCTCCACCAGAAAGCCCATGATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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| CDS-3UTR GCA 90 bp | CCACACAAAATACTATTGAGCTACAAGAAGAAAACCGTAACACTAGTATGGACAGGTAACAAAGAGCCCTaGGGAGCTCTATTCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PHKILLSYKKKTVTLVWTGNKEP*GALFCP Trigger: TGGACAGAATAGAGCTCCGCAGGGCTCTTTGTTACC...TGTCCATACTAGTGTTACGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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| CDS-3UTR GCA 90 bp | TCCACACAAAATACTATTGAGCTACAAGAAGAAAACCGTAACACTAGTATGGACGGACGAGGAAAATCTTaGCAGATAGAGGGAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: STQNTIELQEENRNTSMDGRGKS*QIEGRG Trigger: GCCTCTTCCCTCTATCTGGCAAGATTTTCCTCGTCC...GTCCATACTAGTGTTACGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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| CDS-3UTR CCA 90 bp | AACATACAGAAGGGACATCTATCCCACTTTTGTGTCAATATCATGGGCTTTCTGATATCATGGGCTTTCTaGTGGAGGGGATACATAGGT | + |
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Preference number: 4 (lower is better) Translates to: NIQKGHLSHFCVNIMGFLISWAF*WRGYIG Trigger: ACCTATGTATCCCCTCCACCAGAAAGCCCATGATAT...CAGAAAGCCCATGATATTGACACAAAAGTGGGATAGATGTCCCTTCTGTATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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| CDS-3UTR CCA 90 bp | CCACACAAAATACTATTGAGCTACAAGAAGAAAACCGTAACACTAGTATGGACAACCGTAACACTAGTATaGACAAACCTGGCAGATACT | + |
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Preference number: 4 (lower is better) Translates to: PHKILLSYKKKTVTLVWTTVTLV*TNLADT Trigger: AGTATCTGCCAGGTTTGTCCATACTAGTGTTACGGT...TGTCCATACTAGTGTTACGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399703.6 ENST00000602295.5 |
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| CDS-3UTR CCA 90 bp | AGTATCTCCACACAAAATACTATTGAGCTACAAGAAGAAAACCGTAACACTAGTACCGTAACACTAGTATaGACAAACCTGGCAGATACT | + |
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Preference number: 4 (lower is better) Translates to: SISTQNTIELQEENRNTSTVTLV*TNLADT Trigger: AGTATCTGCCAGGTTTGTCCATACTAGTGTTACGGT...ACTAGTGTTACGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTGGAGATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399703.6 ENST00000602295.5 |
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| CDS-3UTR TCA 90 bp | TCCACACAAAATACTATTGAGCTACAAGAAGAAAACCGTAACACTAGTATGGACCACACAAAATACTATTaGGCTACAAGAAGAAAACCG | + |
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Preference number: 4 (lower is better) Translates to: STQNTIELQEENRNTSMDHTKYY*ATRRKP Trigger: CGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTG...GTCCATACTAGTGTTACGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000399703.6 ENST00000602295.5 |
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| CDS-3UTR GCA 90 bp | ATCTCCACACAAAATACTATTGAGCTACAAGAAGAAAACCGTAACACTAGTATGTGCAGGCTTCATAGCTaGTGTTTCTTGATTGTCATT | + |
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Preference number: 4 (lower is better) Translates to: ISTQNTIELQEENRNTSMCRLHS*CFLIVI Trigger: AATGACAATCAAGAAACAGCAGCTATGAAGCCTGCA...CATACTAGTGTTACGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTGGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399703.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCACACAAAATACTATTGAGCTACAAGAAGAAAACCGTAACACTAGTATGCACACAAAATACTATTaGGCTACAAGAAGAAAACCG | + |
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Preference number: 4 (lower is better) Translates to: ISTQNTIELQEENRNTSMHTKYY*ATRRKP Trigger: CGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTG...CATACTAGTGTTACGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTGGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000399703.6 ENST00000602295.5 |
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| CDS-3UTR CCA 90 bp | CCACACAAAATACTATTGAGCTACAAGAAGAAAACCGTAACACTAGTATGGACAACTTTGAGAATCCTGTaGCTGTTTATTTTCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: PHKILLSYKKKTVTLVWTTLRIL*LFIFTS Trigger: AGAAGTGAAAATAAACAGCCACAGGATTCTCAAAGT...TGTCCATACTAGTGTTACGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399703.6 |
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| CDS-3UTR CAA 90 bp | ATCTCCACACAAAATACTATTGAGCTACAAGAAGAAAACCGTAACACTAGTATGGAGGGGATACATAGGTaGATGACTGAAGGACGAGGA | + |
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Preference number: 5 (lower is better) Translates to: ISTQNTIELQEENRNTSMEGIHR*MTEGRG Trigger: TCCTCGTCCTTCAGTCATCAACCTATGTATCCCCTC...CATACTAGTGTTACGGTTTTCTTCTTGTAGCTCAATAGTATTTTGTGTGGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000602295.5 |
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