RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD13D (Homo sapiens)

Ensembl gene IDs: ENSG00000172932

Ensembl transcript IDs: ENST00000308440.11, ENST00000447274.7, ENST00000504236.2, ENST00000504729.1, ENST00000506119.1, ENST00000506531.5, ENST00000507915.1, ENST00000508417.5, ENST00000508422.1, ENST00000511455.7, ENST00000512101.5, ENST00000512231.5, ENST00000513460.5, ENST00000513750.6, ENST00000514779.2

Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTCCTCGCTGGGCCGCATGGCGGCCAGCAGTGTTTCGGGCTCCTaGAGAGTGAGCCCCAGTGTCTCCACATGCACCACCTGCCGGTCA +
Preference number: 1 (lower is better)
Translates to: CSSLGRMAASSVSGS*RVSPSVSTCTTCRS
Trigger: TGACCGGCAGGTGGTGCATGTGGAGACACTGGGGCTCACTCTGCAGGAGCCCGAAACACTGCTGGCCGCCATGCGGCCCAGCGAGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR GCA 90 bp TCCAGGTGGGTGGAGACGATAGGAGAGGTGAGGCGACTGGCCACATaGTCCTCGCTGGGCCGCATGGCGGCCAGCAGTGTTTCGGGCTCC +
Preference number: 1 (lower is better)
Translates to: SRWVETIGEVRRLAT*SSLGRMAASSVSGS
Trigger: GGAGCCCGAAACACTGCTGGCCGCCATGCGGCCCAGCGAGGAGCATGTGGCCAGTCGCCTCACCTCTCCTATCGTCTCCACCCACCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 90 bp CCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTaGGCACTTCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGT +
Preference number: 1 (lower is better)
Translates to: PGGARCAPCPARCTR*ALQTRWGPPRTGKG
Trigger: ACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR GCA 90 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATaGCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGT +
Preference number: 1 (lower is better)
Translates to: AGGHRPRPGGARCAP*PARCTRWALQTRWG
Trigger: ACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 90 bp CACTCTCACAGACTCCAGGTTTCCCAGAGACACGGCCAGCTCCAGTaGGGTCCGCCCGCGGGGGTCCTCCTGTTCAATGTCGTGCAGGGA +
Preference number: 1 (lower is better)
Translates to: HSHRLQVSQRHGQLQ*GPPAGVLLFNVVQG
Trigger: TCCCTGCACGACATTGAACAGGAGGACCCCCGCGGGCGGACCCCACTGGAGCTGGCCGTGTCTCTGGGAAACCTGGAGTCTGTGAGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR GCA 90 bp TGGCGAACTGCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTaGGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACA +
Preference number: 1 (lower is better)
Translates to: WRTAGGHRPRPGGAR*APCPARCTRWALQT
Trigger: TGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGCAGTTCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 90 bp GCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTaGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACAG +
Preference number: 1 (lower is better)
Translates to: APCPARCTRWALQTR*GPPRTGKGSLMRQQ
Trigger: CTGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 90 bp CCTGCCCTCCAGGAGTGGAGTCCAGAGAGAAGCCAGCCGAGGGAGTaGGTCCCTAACTATGACAGGCCCAGAGAGGGGTCTGCAAGAGCC +
Preference number: 1 (lower is better)
Translates to: PALQEWSPERSQPRE*VPNYDRPREGSARA
Trigger: GGCTCTTGCAGACCCCTCTCTGGGCCTGTCATAGTTAGGGACCCACTCCCTCGGCTGGCTTCTCTCTGGACTCCACTCCTGGAGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506119.1
3UTR CCA 90 bp CCTCCTGCAGGACTGCCCAGCCCTGGCGGTTCTCTTTGCCCACGTTaGCATTGTGTCGAAGGAGCACTCTCACAGACTCCAGGTTTCCCA +
Preference number: 1 (lower is better)
Translates to: PPAGLPSPGGSLCPR*HCVEGALSQTPGFP
Trigger: TGGGAAACCTGGAGTCTGTGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGTCCTGCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 90 bp TACTCGCAGGCTCTCACCCCGCTTCCACACGCGGTACACATCGCTTaGGCACATCTTAGACACAAGGGGCACCCAGCTGGTGAACTCCCA +
Preference number: 1 (lower is better)
Translates to: YSQALTPLPHAVHIA*AHLRHKGHPAGELP
Trigger: TGGGAGTTCACCAGCTGGGTGCCCCTTGTGTCTAAGATGTGCCCAAGCGATGTGTACCGCGTGTGGAAGCGGGGTGAGAGCCTGCGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 90 bp CTGAGGACCATGGATAAGGCAGACATGACTCCTGCCCTCCAGGAGTaGAGTCCAGAGAGAAGCCAGCCGAGGGAGTGGGTCCCTAACTAT +
Preference number: 1 (lower is better)
Translates to: LRTMDKADMTPALQE*SPERSQPREWVPNY
Trigger: ATAGTTAGGGACCCACTCCCTCGGCTGGCTTCTCTCTGGACTCCACTCCTGGAGGGCAGGAGTCATGTCTGCCTTATCCATGGTCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506119.1
3UTR CCA 90 bp ATACCACATTTGTTCCTCTCAAAGGCCACATTACGAGTGTCCAGGTaGGTGGAGACGATAGGAGAGGTGAGGCGACTGGCCACATGCTCC +
Preference number: 1 (lower is better)
Translates to: IPHLFLSKATLRVSR*VETIGEVRRLATCS
Trigger: GGAGCATGTGGCCAGTCGCCTCACCTCTCCTATCGTCTCCACCCACCTGGACACTCGTAATGTGGCCTTTGAGAGGAACAAATGTGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCACGGCAACAGCAGAGCTaGGGGCCGGCACCCACACGG +
Preference number: 2 (lower is better)
Translates to: AGGHRPRPGGARCAPCPARQQQS*GPAPTR
Trigger: CCGTGTGGGTGCCGGCCCCCAGCTCTGCTGTTGCCG...TGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CAA 90 bp TCCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTaGGGCACTTCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: SRRGSLRSMPSTLYP*GTSNTVGSTSHGKG
Trigger: CCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR TCA 90 bp GCCGGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGCGGGGTCTCCAGTGCTaGCTGCCTCCTGCAGGACTG +
Preference number: 2 (lower is better)
Translates to: AGTHTELRGSSQPHRLLKRGLQC*LPPAGL
Trigger: CAGTCCTGCAGGAGGCAGTCAGCACTGGAGACCCCG...CTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCATGGGAGGAATGCTGCTaGGCCATCCCCAGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: AGGHRPRPGGARCAPCPAWEECC*AIPRKD
Trigger: GTCCTTCCTGGGGATGGCGCAGCAGCATTCCTCCCA...TGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp CAGAGAGGTGCTCCGTGCGTGTGCGTGTCACCAGCTCCACGTTGGTGGCACTGTCCTCGCTGGGCCGCATaGCGGCCAGCAGTGTTTCGG +
Preference number: 2 (lower is better)
Translates to: QRGAPCVCVSPAPRWWHCPRWAA*RPAVFR
Trigger: CCGAAACACTGCTGGCCGCCATGCGGCCCAGCGAGG...ACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp GGCACTTCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGTGCCTCCTGCAGGACTaGCCAGCCCTGGCGGTTCTC +
Preference number: 2 (lower is better)
Translates to: GTSNTVGSTSHGKGFPDACLLQD*PALAVL
Trigger: GAGAACCGCCAGGGCTGGGCAGTCCTGCAGGAGGCA...CGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp GCTGCGCCATCCCCAGGAAGGACTGGAATGGAGTCTTCCCCGCTTTGCTCCTCGGTGCTGACTGCCTCCTaGAGGACTGCCCAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: AAPSPGRTGMESSPLCSSVLTAS*RTAQPW
Trigger: CCAGGGCTGGGCAGTCCTGCAGGAGGCAGTCAGCAC...CGAGGAGCAAAGCGGGGAAGACTCCATTCCAGTCCTTCCTGGGGATGGCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp CCCCGCTTTGCTCCTCGACTTGTCCTGATCAGAGAGGTGCTCCGTGCGTGTGCGGGAGATGGCAGAGGGTaGCCTGCGTGTCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: PRFAPRLVLIREVLRACAGDGRG*PACPGR
Trigger: CCTGCCAGGACACGCAGGCCACCCTCTGCCATCTCC...CGCACACGCACGGAGCACCTCTCTGATCAGGACAAGTCGAGGAGCAAAGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CAA 90 bp ATGGCGAACTGCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTaGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAAC +
Preference number: 2 (lower is better)
Translates to: MANCRRSSSSSRRGS*RSMPSTLYPLGTSN
Trigger: GTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGCAGTTCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR TCA 90 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCAGCTTGGCAAAGTaGGCGTTGCTGATGGCCATT +
Preference number: 2 (lower is better)
Translates to: AGGHRPRPGGARCAPCPARSLAK*ALLMAI
Trigger: AATGGCCATCAGCAACGCTCACTTTGCCAAGCTGCG...TGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR TCA 90 bp ACCAAGGCAGACGCTCCACTCCCAGGCCACGTCGCTGGGGGCCCTTCCCACTGTTGGATAAGGCAGACATaGCTCCTGCCCTCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: TKADAPLPGHVAGGPSHCWIRQT*LLPSRS
Trigger: ACTCCTGGAGGGCAGGAGTCATGTCTGCCTTATCCA...ACAGTGGGAAGGGCCCCCAGCGACGTGGCCTGGGAGTGGAGCGTCTGCCTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506119.1
3UTR-3UTR CCA 90 bp CAGAGAGGTGCTCCGTGCGTGTGCGTGTCACCAGCTCCACGTTGGTGGCACTGTTGTCGTGCAGGGAGATaGCAGAGGGTGGCCTGCGTG +
Preference number: 2 (lower is better)
Translates to: QRGAPCVCVSPAPRWWHCCRAGR*QRVACV
Trigger: CACGCAGGCCACCCTCTGCCATCTCCCTGCACGACA...ACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp GGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGGTGAGGACTGCCCAGCCCTaGCGGTTCTCTTTGCCCACG +
Preference number: 2 (lower is better)
Translates to: GTHTELRGSSQPHRLLKVRTAQP*RFSLPT
Trigger: CGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGTCCT...CACCTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp TCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCATGATGGGGGTCACCTaGTCACCCAGGGAGAGCGGG +
Preference number: 2 (lower is better)
Translates to: SMPSTLYPLGTSNTVGSTMMGVT*SPRESG
Trigger: CCCGCTCTCCCTGGGTGACCAGGTGACCCCCATCAT...GGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR TCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACACGGGCTCCTGCAGAGTaGGCCCCAGTGTCTCCACAT +
Preference number: 2 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATRAPAE*APVSPH
Trigger: ATGTGGAGACACTGGGGCTCACTCTGCAGGAGCCCG...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp CCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCTCGCACTACTGGAGCACCAGCTaGACCATCTCGGGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: PSTLYPLGTSNTVGSTSHYWSTS*TISGSP
Trigger: TGGAGACCCCGAGATGGTGCAGCTGGTGCTCCAGTA...GTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp CACCTTGGCCTCGTAGCCGCTAACAGTTTCCATCTTCTCAGACCGCCAGCCCCACCGCCAGCCTCTGCGTaGCCCTCTGGTAGTCCCGAT +
Preference number: 2 (lower is better)
Translates to: HLGLVAANSFHLLRPPAPPPASA*PSGSPD
Trigger: ATCGGGACTACCAGAGGGCCACGCAGAGGCTGGCGG...TGGGGCTGGCGGTCTGAGAAGATGGAAACTGTTAGCGGCTACGAGGCCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CAA 90 bp GCCTCCTGCAGGACTGCCCAGCCCTGGCGGTTCTCTTTGCCCACGTaGGCATTGTGTCGAAGGAGCACTCTCACAGACTCCAGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: ASCRTAQPWRFSLPT*ALCRRSTLTDSRFP
Trigger: GGGAAACCTGGAGTCTGTGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGTCCTGCAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp GCATTGTGTCGAAGGAGCACTCTCACAGACTCCAGGTTTCCCAGAGACACGGCCTGGCAGAGGGTGGCCTaGGTGTCCTGGCAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: ALCRRSTLTDSRFPRDTAWQRVA*VSWQGR
Trigger: TCTCCCCTGCCAGGACACGCAGGCCACCCTCTGCCA...GGCCGTGTCTCTGGGAAACCTGGAGTCTGTGAGAGTGCTCCTTCGACACAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACAGTGTGGGAGGAATGCTaGTGCGCCATCCCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATVWEEC*CAIPRK
Trigger: CTTCCTGGGGATGGCGCAGCAGCATTCCTCCCACAC...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp CCCCGCTTTGCTCCTCGACTTGTCCTGATCAGAGAGGTGCTCCGTGCGTGTGCGCCAGCTCCACGTTGGTaGCACTGTACACCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: PRFAPRLVLIREVLRACAPAPRW*HCTPWP
Trigger: AGGCCAAGGTGTACAGTGCCACCAACGTGGAGCTGG...CGCACACGCACGGAGCACCTCTCTGATCAGGACAAGTCGAGGAGCAAAGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp GGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGGTGCCTGGCGGTTCTCTTTaGCCACGTTGGCATTGTGTC +
Preference number: 2 (lower is better)
Translates to: GTHTELRGSSQPHRLLKVPGGSL*PRWHCV
Trigger: GACACAATGCCAACGTGGGCAAAGAGAACCGCCAGG...CACCTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACACATCACCAGGGCTCCTaGCTCCTGGCCCTTGAAGAT +
Preference number: 2 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATHHQGS*LLALED
Trigger: ATCTTCAAGGGCCAGGAGGCAGGAGCCCTGGTGATG...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp CACCTTGGCCTCGTAGCCGCTAACAGTTTCCATCTTCTCAGACCGCCAGCCCCACCCAGTGTCTCCACATaGACCACCTGCCGGTCATGG +
Preference number: 2 (lower is better)
Translates to: HLGLVAANSFHLLRPPAPPSVST*TTCRSW
Trigger: CCATGACCGGCAGGTGGTGCATGTGGAGACACTGGG...TGGGGCTGGCGGTCTGAGAAGATGGAAACTGTTAGCGGCTACGAGGCCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACAAGTGTTTCGGGCTCCTaGAGAGTGAGCCCCAGTGTC +
Preference number: 2 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATSVSGS*RVSPSV
Trigger: GACACTGGGGCTCACTCTGCAGGAGCCCGAAACACT...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACAAGGGCTCCTGCCTCCTaGCCCTTGAAGATGAAGCTC +
Preference number: 2 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATRAPAS*PLKMKL
Trigger: GAGCTTCATCTTCAAGGGCCAGGAGGCAGGAGCCCT...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp CCATCTTCTCAGACCGCCAGCCCCAGATACCACATTTGTTCCTCTCAAAGGCCACCACATGCTCCTCGCTaGGCCGCATGGCGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: PSSQTASPRYHICSSQRPPHAPR*AAWRPA
Trigger: TGCTGGCCGCCATGCGGCCCAGCGAGGAGCATGTGG...TGGCCTTTGAGAGGAACAAATGTGGTATCTGGGGCTGGCGGTCTGAGAAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp GCCGGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGTTACGAGTGTCCAGGTaGGTGGAGACGATAGGAGAG +
Preference number: 2 (lower is better)
Translates to: AGTHTELRGSSQPHRLLKLRVSR*VETIGE
Trigger: CTCTCCTATCGTCTCCACCCACCTGGACACTCGTAA...CTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp GGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGGTGTCACCAGCTCCACGTTaGTGGCACTGTACACCTTGG +
Preference number: 2 (lower is better)
Translates to: GTHTELRGSSQPHRLLKVSPAPR*WHCTPW
Trigger: CCAAGGTGTACAGTGCCACCAACGTGGAGCTGGTGA...CACCTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp CCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCTCGCACCAGGAAGGACTGGAATaGAGTCTTCCCCGCTTTGCT +
Preference number: 2 (lower is better)
Translates to: PSTLYPLGTSNTVGSTSHQEGLE*SLPRFA
Trigger: AGCAAAGCGGGGAAGACTCCATTCCAGTCCTTCCTG...GTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp CAGAGAGGTGCTCCGTGCGTGTGCGTGTCACCAGCTCCACGTTGGTGGCACTGTTCCTGTTCAATGTCGTaGAGGGAGATGGCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: QRGAPCVCVSPAPRWWHCSCSMS*REMAEG
Trigger: ACCCTCTGCCATCTCCCTGCACGACATTGAACAGGA...ACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CCA 90 bp GGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGGTGCGGGCATTGAGCACGTaGAAAAGGGGAATCTCAATT +
Preference number: 2 (lower is better)
Translates to: GTHTELRGSSQPHRLLKVRALST*KRGISI
Trigger: AATTGAGATTCCCCTTTTCCACGTGCTCAATGCCCG...CACCTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR GCA 90 bp GGCACTTCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGACTCAGCCACAGTGTTaGCTTGAACCTCTGTACTTT +
Preference number: 2 (lower is better)
Translates to: GTSNTVGSTSHGKGFPDATQPQC*LEPLYF
Trigger: AAAGTACAGAGGTTCAAGGCAACACTGTGGCTGAGT...CGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 72 bp CACCAAGGCAGACGCTCCACTCCCAGGCCACGTCGCTaGGGGCCCTTCCCACTGTGCCACGCTGGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: HQGRRSTPRPRR*GPFPLCHAGPS
Trigger: GCTGGGGCCAGCGTGGCACAGTGGGAAGGGCCCCCAGCGACGTGGCCTGGGAGTGGAGCGTCTGCCTTGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506119.1
3UTR GCA 72 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTaGGCTCCATGCCCAGCACGCTGTACCCGTTGGGCA +
Preference number: 3 (lower is better)
Translates to: AGGHRPRPGGAR*APCPARCTRWA
Trigger: TGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR GCA 72 bp CTGGGCCGCATGGCGGCCAGCAGTGTTTCGGGCTCCTaGAGAGTGAGCCCCAGTGTCTCCACATGCACCACC +
Preference number: 3 (lower is better)
Translates to: LGRMAASSVSGS*RVSPSVSTCTT
Trigger: GGTGGTGCATGTGGAGACACTGGGGCTCACTCTGCAGGAGCCCGAAACACTGCTGGCCGCCATGCGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR TCA 72 bp GCATGGCGGCCAGCAGTGTTTCGGGCTCCTGCAGAGTaGGCCCCAGTGTCTCCACATGCACCACCTGCCGGT +
Preference number: 3 (lower is better)
Translates to: AWRPAVFRAPAE*APVSPHAPPAG
Trigger: ACCGGCAGGTGGTGCATGTGGAGACACTGGGGCTCACTCTGCAGGAGCCCGAAACACTGCTGGCCGCCATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR GCA 72 bp GTGGAGACGATAGGAGAGGTGAGGCGACTGGCCACATaGTCCTCGCTGGGCCGCATGGCGGCCAGCAGTGTT +
Preference number: 3 (lower is better)
Translates to: VETIGEVRRLAT*SSLGRMAASSV
Trigger: AACACTGCTGGCCGCCATGCGGCCCAGCGAGGAGCATGTGGCCAGTCGCCTCACCTCTCCTATCGTCTCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 72 bp GCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTaGGCACTTCAAACACGGTGGGGTCCACCTCGCACG +
Preference number: 3 (lower is better)
Translates to: ARCAPCPARCTR*ALQTRWGPPRT
Trigger: CGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR GCA 72 bp CATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATaGCCAGCACGCTGTACCCGTTGGGCACTTCAAACA +
Preference number: 3 (lower is better)
Translates to: HRPRPGGARCAP*PARCTRWALQT
Trigger: TGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CAA 90 bp GGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGGTGCCTGCCTCCTGGCCCTaGAAGATGAAGCTCCTCCGG +
Preference number: 3 (lower is better)
Translates to: GTHTELRGSSQPHRLLKVPASWP*KMKLLR
Trigger: CCGGAGGAGCTTCATCTTCAAGGGCCAGGAGGCAGG...CACCTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CAA 90 bp GCCGGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGGTCACCAGCTCCACGTaGGTGGCACTGTACACCTTG +
Preference number: 3 (lower is better)
Translates to: AGTHTELRGSSQPHRLLKVTSST*VALYTL
Trigger: CAAGGTGTACAGTGCCACCAACGTGGAGCTGGTGAC...CTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 72 bp CCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTaGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATG +
Preference number: 3 (lower is better)
Translates to: PARCTRWALQTR*GPPRTGKGSLM
Trigger: CATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CAA 90 bp TCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCGCCTGGCGAAGTTTGTaGAGCAGTTCCGGAATGCCC +
Preference number: 3 (lower is better)
Translates to: SMPSTLYPLGTSNTVGSTAWRSL*SSSGMP
Trigger: GGGCATTCCGGAACTGCTCAACAAACTTCGCCAGGC...GGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CAA 90 bp TCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCGGGGCCTGGCGAAGTTaGTTGAGCAGTTCCGGAATG +
Preference number: 3 (lower is better)
Translates to: SMPSTLYPLGTSNTVGSTGAWRS*LSSSGM
Trigger: CATTCCGGAACTGCTCAACAAACTTCGCCAGGCCCC...GGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CAA 90 bp GGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAGACTCCAGGCTGAAGTaGGGGTCGAAGTACTCCTCA +
Preference number: 3 (lower is better)
Translates to: GGARCAPCPARCTRWALQDSRLK*GSKYSS
Trigger: TGAGGAGTACTTCGACCCCAACTTCAGCCTGGAGTC...TTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR GCA 72 bp CCTCCTGCAGGACTGCCCAGCCCTGGCGGTTCTCTTTaGCCACGTTGGCATTGTGTCGAAGGAGCACTCTCA +
Preference number: 3 (lower is better)
Translates to: PPAGLPSPGGSL*PRWHCVEGALS
Trigger: TGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGTCCTGCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR GCA 72 bp TGCAGAGTGAGCCCCAGTGTCTCCACATGCACCACCTaGCGGTCATGGTCCACTTCCATCACCAGGGCTCCT +
Preference number: 3 (lower is better)
Translates to: CRVSPSVSTCTT*RSWSTSITRAP
Trigger: AGGAGCCCTGGTGATGGAAGTGGACCATGACCGGCAGGTGGTGCATGTGGAGACACTGGGGCTCACTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 72 bp GCTCTCACCCCGCTTCCACACGCGGTACACATCGCTTaGGCACATCTTAGACACAAGGGGCACCCAGCTGGT +
Preference number: 3 (lower is better)
Translates to: ALTPLPHAVHIA*AHLRHKGHPAG
Trigger: ACCAGCTGGGTGCCCCTTGTGTCTAAGATGTGCCCAAGCGATGTGTACCGCGTGTGGAAGCGGGGTGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR TCA 72 bp TCTCAACGTAGAAATCGGGGGCCTGGCGAAGTTTGTTaGGCAGTTCCGGAATGCCCGCCAGCCTCTGCGTGG +
Preference number: 3 (lower is better)
Translates to: SQRRNRGPGEVC*AVPECPPASAW
Trigger: CCACGCAGAGGCTGGCGGGCATTCCGGAACTGCTCAACAAACTTCGCCAGGCCCCCGATTTCTACGTTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 72 bp ATGGATAAGGCAGACATGACTCCTGCCCTCCAGGAGTaGAGTCCAGAGAGAAGCCAGCCGAGGGAGTGGGTC +
Preference number: 3 (lower is better)
Translates to: MDKADMTPALQE*SPERSQPREWV
Trigger: GACCCACTCCCTCGGCTGGCTTCTCTCTGGACTCCACTCCTGGAGGGCAGGAGTCATGTCTGCCTTATCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506119.1
3UTR-3UTR CAA 90 bp CCAGGAGACTGGTGTCTACTCGCAGGCTCTCACCCCGCTTCCACACGCGGTACATTCTCTTTGCCCACGTaGGCATTGTGTCGAAGGAGC +
Preference number: 3 (lower is better)
Translates to: PGDWCLLAGSHPASTRGTFSLPT*ALCRRS
Trigger: GCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAA...TGTACCGCGTGTGGAAGCGGGGTGAGAGCCTGCGAGTAGACACCAGTCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CAA 90 bp AGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACAGCCACAGTGTTGCCTaGAACCTCTGTACTTTGCTG +
Preference number: 3 (lower is better)
Translates to: RGSLRSMPSTLYPLGTSNSHSVA*NLCTLL
Trigger: CAGCAAAGTACAGAGGTTCAAGGCAACACTGTGGCT...GTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR TCA 72 bp AATGGAGTCTTCCCCGCTTTGCTCCTCGACTTGTCCTaGTCAGAGAGGTGCTCCGTGCGTGTGCGTGTCACC +
Preference number: 3 (lower is better)
Translates to: NGVFPALLLDLS*SERCSVRVRVT
Trigger: GGTGACACGCACACGCACGGAGCACCTCTCTGATCAGGACAAGTCGAGGAGCAAAGCGGGGAAGACTCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR GCA 72 bp TCGACTTGTCCTGATCAGAGAGGTGCTCCGTGCGTGTaGGTGTCACCAGCTCCACGTTGGTGGCACTGTACA +
Preference number: 3 (lower is better)
Translates to: STCPDQRGAPCV*VSPAPRWWHCT
Trigger: TGTACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTGATCAGGACAAGTCGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CCA 72 bp GCCACGTCGCTGGGGGCCCTTCCCACTGTGCCACGCTaGCCCCAGCAGGTACTCATGAAATTCAATAGAAAA +
Preference number: 3 (lower is better)
Translates to: ATSLGALPTVPR*PQQVLMKFNRK
Trigger: TTTTCTATTGAATTTCATGAGTACCTGCTGGGGCCAGCGTGGCACAGTGGGAAGGGCCCCCAGCGACGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506119.1
3UTR CCA 72 bp TTGTTCCTCTCAAAGGCCACATTACGAGTGTCCAGGTaGGTGGAGACGATAGGAGAGGTGAGGCGACTGGCC +
Preference number: 3 (lower is better)
Translates to: LFLSKATLRVSR*VETIGEVRRLA
Trigger: GGCCAGTCGCCTCACCTCTCCTATCGTCTCCACCCACCTGGACACTCGTAATGTGGCCTTTGAGAGGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR-3UTR CAA 90 bp ATACATGGGTGGCACCATCCATTCATCAAAGACAAACTACCGGTTTTCTGTGCCGGTCTGCAAGAGCCCTaGTCCCGAGGCAAGTCCCCA +
Preference number: 3 (lower is better)
Translates to: IHGWHHPFIKDKLPVFCAGLQEP*SRGKSP
Trigger: TGGGGACTTGCCTCGGGACAAGGGCTCTTGCAGACC...GGCACAGAAAACCGGTAGTTTGTCTTTGATGAATGGATGGTGCCACCCATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR GCA 90 bp GACACGGCCAGCTCCAGTGGGGTCCGCCCGCGGGGGTCCTCCTGTTCAATGTCGGCCCAGACGAGCCGGTaGAGCGGGAAGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: DTASSSGVRPRGSSCSMSAQTSR*SGKVGP
Trigger: GGGCCCCACCTTCCCGCTGCACCGGCTCGTCTGGGC...CGACATTGAACAGGAGGACCCCCGCGGGCGGACCCCACTGGAGCTGGCCGTGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp TTTCCCAGAGACACGGCCAGCTCCAGTGGGGTCCGCCCGCGGGGGTCCTCCTGTCCTCGGCTTCGGGCCTaGCACGGCCCCCTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPRDTASSSGVRPRGSSCPRLRA*HGPLAS
Trigger: GGAGGCTAGGGGGCCGTGCCAGGCCCGAAGCCGAGG...ACAGGAGGACCCCCGCGGGCGGACCCCACTGGAGCTGGCCGTGTCTCTGGGAAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp AAGGCAGACGCTCCACTCCCAGGCCACGTCGCTGGGGGCCCTTCCCACTGTGCCGGGCCCTTCCCACTGTaGCACGCTGGCCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KADAPLPGHVAGGPSHCAGPFPL*HAGPSR
Trigger: CCTGCTGGGGCCAGCGTGGCACAGTGGGAAGGGCCC...GGCACAGTGGGAAGGGCCCCCAGCGACGTGGCCTGGGAGTGGAGCGTCTGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR GCA 90 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCAAAGTCCTCCTCCTCCTaGTGCCCGCGCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AGGHRPRPGGARCAPCPAKSSSS*CPRRSR
Trigger: GCGGGAGCGGCGCGGGCAGCAGGAGGAGGAGGACTT...TGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp TTTCCCAGAGACACGGCCAGCTCCAGTGGGGTCCGCCCGCGGGGGTCCTCCTGTAGGCGACTGGCCACATaGTCCTCGCTGGGCCGCATG +
Preference number: 4 (lower is better)
Translates to: FPRDTASSSGVRPRGSSCRRLAT*SSLGRM
Trigger: CATGCGGCCCAGCGAGGAGCATGTGGCCAGTCGCCT...ACAGGAGGACCCCCGCGGGCGGACCCCACTGGAGCTGGCCGTGTCTCTGGGAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GACGCTCCACTCCCAGGCCACGTCGCTGGGGGCCCTTCCCACTGTGCCACGCTGCCCACTGTGCCACGCTaGCCCCAGCAGGTACTCATG +
Preference number: 4 (lower is better)
Translates to: DAPLPGHVAGGPSHCATLPTVPR*PQQVLM
Trigger: CATGAGTACCTGCTGGGGCCAGCGTGGCACAGTGGG...CAGCGTGGCACAGTGGGAAGGGCCCCCAGCGACGTGGCCTGGGAGTGGAGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR GCA 90 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCATGGCAGAGGGTGGCCTaGGTGTCCTGGCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: AGGHRPRPGGARCAPCPAWQRVA*VSWQGR
Trigger: TCTCCCCTGCCAGGACACGCAGGCCACCCTCTGCCA...TGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp AGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACGTTGGTGGGGCTGGCTaGCTGCTGCACGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RGSLRSMPSTLYPLGTSNVGGAG*LLHGGP
Trigger: GGGGCCCCCGTGCAGCAGGCAGCCAGCCCCACCAAC...GTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp CCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCTCGCACTGGGGTTGGTGGGGCTaGCTGCCTGCTGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: PSTLYPLGTSNTVGSTSHWGWWG*LPAARG
Trigger: CCCCCGTGCAGCAGGCAGCCAGCCCCACCAACCCCA...GTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GCCGGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGCGGCAACAGCAGAGCTaGGGGCCGGCACCCACACGG +
Preference number: 4 (lower is better)
Translates to: AGTHTELRGSSQPHRLLKRQQQS*GPAPTR
Trigger: CCGTGTGGGTGCCGGCCCCCAGCTCTGCTGTTGCCG...CTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GAGGGGTCTGCAAGAGCCCTTGTCCCGAGGCAAGTCCCCAGCCAGCTCTCAGACCCCAGGCCACGTCGCTaGGGGCCCTTCCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: EGSARALVPRQVPSQLSDPRPRR*GPFPLC
Trigger: GCACAGTGGGAAGGGCCCCCAGCGACGTGGCCTGGG...GTCTGAGAGCTGGCTGGGGACTTGCCTCGGGACAAGGGCTCTTGCAGACCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR GCA 90 bp CTGGCCACATGCTCCTCGCTGGGCCGCATGGCGGCCAGCAGTGTTTCGGGCTCCTGGGAGGAATGCTGCTaGGCCATCCCCAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LATCSSLGRMAASSVSGSWEECC*AIPRKD
Trigger: GTCCTTCCTGGGGATGGCGCAGCAGCATTCCTCCCA...GGAGCCCGAAACACTGCTGGCCGCCATGCGGCCCAGCGAGGAGCATGTGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp TTTCCCAGAGACACGGCCAGCTCCAGTGGGGTCCGCCCGCGGGGGTCCTCCTGTAGGGCCAGGCGCAGCTaGTCTTCAAAGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FPRDTASSSGVRPRGSSCRARRS*SSKLGG
Trigger: TCCACCCAGCTTTGAAGAGCAGCTGCGCCTGGCCCT...ACAGGAGGACCCCCGCGGGCGGACCCCACTGGAGCTGGCCGTGTCTCTGGGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp CCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCTCGCACCGGGGTCTCCAGTGCTaGCTGCCTCCTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: PSTLYPLGTSNTVGSTSHRGLQC*LPPAGL
Trigger: CAGTCCTGCAGGAGGCAGTCAGCACTGGAGACCCCG...GTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp CTGGCCACATGCTCCTCGCTGGGCCGCATGGCGGCCAGCAGTGTTTCGGGCTCCTGGCCATTAGGTCGATaGTGGGGGTCACCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LATCSSLGRMAASSVSGSWPLGR*WGSPGH
Trigger: GTGACCAGGTGACCCCCATCATCGACCTAATGGCCA...GGAGCCCGAAACACTGCTGGCCGCCATGCGGCCCAGCGAGGAGCATGTGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAGTGCTGACTGCCTCCTaGAGGACTGCCCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GGARCAPCPARCTRWALQVLTAS*RTAQPW
Trigger: CCAGGGCTGGGCAGTCCTGCAGGAGGCAGTCAGCAC...TTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACACCCGGAGGGGCTCGTTaGGCTCCATGCCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATPGGAR*APCPAR
Trigger: GCGTGCTGGGCATGGAGCGCAACGAGCCCCTCCGGG...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GACACGGCCAGCTCCAGTGGGGTCCGCCCGCGGGGGTCCTCCTGTTCAATGTCGCATCTCAGTCTCCCCTaGCTGCTCATTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: DTASSSGVRPRGSSCSMSHLSLP*LLIPGA
Trigger: AGCCCCAGGAATGAGCAGGCAGGGGAGACTGAGATG...CGACATTGAACAGGAGGACCCCCGCGGGCGGACCCCACTGGAGCTGGCCGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp CCAGGAGACTGGTGTCTACTCGCAGGCTCTCACCCCGCTTCCACACGCGGTACACACCGGGCCGGGTGTTaGTCAGGGCTTCCCAGACGG +
Preference number: 4 (lower is better)
Translates to: PGDWCLLAGSHPASTRGTHRAGC*SGLPRR
Trigger: CCGTCTGGGAAGCCCTGACCAACACCCGGCCCGGTG...TGTACCGCGTGTGGAAGCGGGGTGAGAGCCTGCGAGTAGACACCAGTCTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CAA 72 bp GGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTaGGGCACTTCAAACACGGTGGGGTCCACCTCGCAC +
Preference number: 4 (lower is better)
Translates to: GSLRSMPSTLYP*GTSNTVGSTSH
Trigger: GTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GCTGCGCCATCCCCAGGAAGGACTGGAATGGAGTCTTCCCCGCTTTGCTCCTCGGCCTCCAGTTCGCGATaGCGGTTCGCCCAGACGAGC +
Preference number: 4 (lower is better)
Translates to: AAPSPGRTGMESSPLCSSASSSR*RFAQTS
Trigger: GCTCGTCTGGGCGAACCGGCATCGCGAACTGGAGGC...CGAGGAGCAAAGCGGGGAAGACTCCATTCCAGTCCTTCCTGGGGATGGCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp CAGAGAGGTGCTCCGTGCGTGTGCGTGTCACCAGCTCCACGTTGGTGGCACTGTTGCCTCCTGCAGGACTaGCCAGCCCTGGCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QRGAPCVCVSPAPRWWHCCLLQD*PALAVL
Trigger: GAGAACCGCCAGGGCTGGGCAGTCCTGCAGGAGGCA...ACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp CCCCGCTTTGCTCCTCGACTTGTCCTGATCAGAGAGGTGCTCCGTGCGTGTGCGCCGGTGTGGGAGGAATaGTGCTGCGCCATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRFAPRLVLIREVLRACAPVWEE*CCAIPR
Trigger: CCTGGGGATGGCGCAGCAGCATTCCTCCCACACCGG...CGCACACGCACGGAGCACCTCTCTGATCAGGACAAGTCGAGGAGCAAAGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAACCTGCTCCGCCTCAGTaGCCGCTTCAAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GGARCAPCPARCTRWALQPAPPQ*PLQAGS
Trigger: AGAGCCTGCTTGAAGCGGGCACTGAGGCGGAGCAGG...TTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GGCACTTCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGTCCCAGACGGTCACCTaGTCCGCCTCAGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GTSNTVGSTSHGKGFPDASQTVT*SASVPA
Trigger: AGCGGGCACTGAGGCGGAGCAGGTGACCGTCTGGGA...CGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GAGGGGTCTGCAAGAGCCCTTGTCCCGAGGCAAGTCCCCAGCCAGCTCTCAGACGCCCAGAGAGGGGTCTaGAAGAGCCCTTGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: EGSARALVPRQVPSQLSDAQRGV*KSPCPE
Trigger: CTCGGGACAAGGGCTCTTGCAGACCCCTCTCTGGGC...GTCTGAGAGCTGGCTGGGGACTTGCCTCGGGACAAGGGCTCTTGCAGACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR CCA 90 bp GGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAAGGACTGCCCAGCCCTaGCGGTTCTCTTTGCCCACG +
Preference number: 4 (lower is better)
Translates to: GGARCAPCPARCTRWALQRTAQP*RFSLPT
Trigger: CGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGTCCT...TTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GGCACTTCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGCCGCCAGCCTCTGCGTaGCCCTCTGGTAGTCCCGAT +
Preference number: 4 (lower is better)
Translates to: GTSNTVGSTSHGKGFPDAPPASA*PSGSPD
Trigger: ATCGGGACTACCAGAGGGCCACGCAGAGGCTGGCGG...CGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACACCACATGCTCCTCGCTaGGCCGCATGGCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATPHAPR*AAWRPA
Trigger: TGCTGGCCGCCATGCGGCCCAGCGAGGAGCATGTGG...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GACACGGCCAGCTCCAGTGGGGTCCGCCCGCGGGGGTCCTCCTGTTCAATGTCGATCCCCAGGAAGGACTaGAATGGAGTCTTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: DTASSSGVRPRGSSCSMSIPRKD*NGVFPA
Trigger: AGCGGGGAAGACTCCATTCCAGTCCTTCCTGGGGAT...CGACATTGAACAGGAGGACCCCCGCGGGCGGACCCCACTGGAGCTGGCCGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GCTGCGCCATCCCCAGGAAGGACTGGAATGGAGTCTTCCCCGCTTTGCTCCTCGTGGCTGTGGGGTTGGTaGGGCTGGCTGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: AAPSPGRTGMESSPLCSSWLWGW*GWLPAA
Trigger: TGCAGCAGGCAGCCAGCCCCACCAACCCCACAGCCA...CGAGGAGCAAAGCGGGGAAGACTCCATTCCAGTCCTTCCTGGGGATGGCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GCTGCGCCATCCCCAGGAAGGACTGGAATGGAGTCTTCCCCGCTTTGCTCCTCGGCTGCTCTTCAAAGCTaGGTGGACCGGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AAPSPGRTGMESSPLCSSAALQS*VDRGLG
Trigger: CCCCAGCCCCCGGTCCACCCAGCTTTGAAGAGCAGC...CGAGGAGCAAAGCGGGGAAGACTCCATTCCAGTCCTTCCTGGGGATGGCGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GACAGGCCCAGAGAGGGGTCTGCAAGAGCCCTTGTCCCGAGGCAAGTCCCCAGCCCTGCCCTCCAGGAGTaGAGTCCAGAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: DRPREGSARALVPRQVPSPALQE*SPERSQ
Trigger: CTGGCTTCTCTCTGGACTCCACTCCTGGAGGGCAGG...GCTGGGGACTTGCCTCGGGACAAGGGCTCTTGCAGACCCCTCTCTGGGCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR TCA 90 bp TCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCCGGGCTCCTGCAGAGTaGGCCCCAGTGTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: SMPSTLYPLGTSNTVGSTRAPAE*APVSPH
Trigger: ATGTGGAGACACTGGGGCTCACTCTGCAGGAGCCCG...GGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp CCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCTCGCACGCGGCCAATGTTCCGTaGCTCCAGGCTGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PSTLYPLGTSNTVGSTSHAANVP*LQAEVG
Trigger: CCCAACTTCAGCCTGGAGTCACGGAACATTGGCCGC...GTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp GCCGGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGCGGGAAAGGGTTCCCTaGTGCGGCAACAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: AGTHTELRGSSQPHRLLKRERVP*CGNSRA
Trigger: AGCTCTGCTGTTGCCGCATCAGGGAACCCTTTCCCG...CTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCACCTGGCGGTTCTCTTTaGCCACGTTGGCATTGTGTC +
Preference number: 4 (lower is better)
Translates to: AGGHRPRPGGARCAPCPAPGGSL*PRWHCV
Trigger: GACACAATGCCAACGTGGGCAAAGAGAACCGCCAGG...TGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp AGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACGGTGCTCCGTGCGTGTaGGTGTCACCAGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: RGSLRSMPSTLYPLGTSNGAPCV*VSPAPR
Trigger: ACGTGGAGCTGGTGACACGCACACGCACGGAGCACC...GTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp TCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCGCTCGTTGCGCTCCATaGCCAGCACGCTGTACCCGT +
Preference number: 4 (lower is better)
Translates to: SMPSTLYPLGTSNTVGSTARCAP*PARCTR
Trigger: ACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGC...GGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp CAGAGAGGTGCTCCGTGCGTGTGCGTGTCACCAGCTCCACGTTGGTGGCACTGTCGCTCCCGCTCCTCCTaGTCCCGTGAAGACAACTCC +
Preference number: 4 (lower is better)
Translates to: QRGAPCVCVSPAPRWWHCRSRSS*SREDNS
Trigger: GGAGTTGTCTTCACGGGAGCAGGAGGAGCGGGAGCG...ACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp CAGAGAGGTGCTCCGTGCGTGTGCGTGTCACCAGCTCCACGTTGGTGGCACTGTTTTGGCGGAACCTGGTaGCTGTGCAGTGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QRGAPCVCVSPAPRWWHCFGGTW*LCSAAS
Trigger: GGAGGCCGCACTGCACAGCCACCAGGTTCCGCCAAA...ACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp CAGAGAGGTGCTCCGTGCGTGTGCGTGTCACCAGCTCCACGTTGGTGGCACTGTGAGTTTGGCGGAACCTaGTGGCTGTGCAGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: QRGAPCVCVSPAPRWWHCEFGGT*WLCSAA
Trigger: GGCCGCACTGCACAGCCACCAGGTTCCGCCAAACTC...ACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCAAGGTTGTCAGGAGTTTaGCGGAACCTGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AGGHRPRPGGARCAPCPARLSGV*RNLVAV
Trigger: CACAGCCACCAGGTTCCGCCAAACTCCTGACAACCT...TGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp TCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCTGTCGTGCAGGGAGATaGCAGAGGGTGGCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: SMPSTLYPLGTSNTVGSTCRAGR*QRVACV
Trigger: CACGCAGGCCACCCTCTGCCATCTCCCTGCACGACA...GGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp TGGTCACCCAGGGAGAGCGGGTGCTCTTCACTCAGCCACAGTGTTGCCTTGAACCCTCGCTGGGCCGCATaGCGGCCAGCAGTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: WSPRESGCSSLSHSVALNPRWAA*RPAVFR
Trigger: CCGAAACACTGCTGGCCGCCATGCGGCCCAGCGAGG...GTTCAAGGCAACACTGTGGCTGAGTGAAGAGCACCCGCTCTCCCTGGGTGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGGTGATGATGGGGGTCACCTaGTCACCCAGGGAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GTHTELRGSSQPHRLLKVMMGVT*SPRESG
Trigger: CCCGCTCTCCCTGGGTGACCAGGTGACCCCCATCAT...CACCTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp CCAGGAGACTGGTGTCTACTCGCAGGCTCTCACCCCGCTTCCACACGCGGTACAGGCCCCTGGGCTCTGTaGACAGCTGCAGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PGDWCLLAGSHPASTRGTGPWAL*TAAGFP
Trigger: AGGAAAGCCTGCAGCTGTCCACAGAGCCCAGGGGCC...TGTACCGCGTGTGGAAGCGGGGTGAGAGCCTGCGAGTAGACACCAGTCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GGCGGTTCTCTTTGCCCACGTTGGCATTGTGTCGAAGGAGCACTCTCACAGACTGGGCAGGGAGTGGCCTaGCCAGCCCTCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: GGSLCPRWHCVEGALSQTGQGVA*PALPGL
Trigger: TAGCCCCGGGAGGGCTGGCCAGGCCACTCCCTGCCC...AGTCTGTGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp TCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCCTGCCTGCTCATTCCTaGGGCTCCAGGCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: SMPSTLYPLGTSNTVGSTLPAHS*GSRPQA
Trigger: AGCTTGGGGCCTGGAGCCCCAGGAATGAGCAGGCAG...GGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp CCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCTCGCACCTCCTCGACTTGTCCTaGTCAGAGAGGTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PSTLYPLGTSNTVGSTSHLLDLS*SERCSV
Trigger: CACGGAGCACCTCTCTGATCAGGACAAGTCGAGGAG...GTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCAGCCACAGTGTTGCCTTaGACCTCTGTACTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGGHRPRPGGARCAPCPAATVLP*TSVLCW
Trigger: CCAGCAAAGTACAGAGGTTCAAGGCAACACTGTGGC...TGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp CCCCGCTTTGCTCCTCGACTTGTCCTGATCAGAGAGGTGCTCCGTGCGTGTGCGCCCAGTGTCTCCACATaGACCACCTGCCGGTCATGG +
Preference number: 4 (lower is better)
Translates to: PRFAPRLVLIREVLRACAPSVST*TTCRSW
Trigger: CCATGACCGGCAGGTGGTGCATGTGGAGACACTGGG...CGCACACGCACGGAGCACCTCTCTGATCAGGACAAGTCGAGGAGCAAAGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCAGAGTCTTCCCCGCTTTaGTCCTCGACTTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: AGGHRPRPGGARCAPCPAESSPL*SSTCPD
Trigger: ATCAGGACAAGTCGAGGAGCAAAGCGGGGAAGACTC...TGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GCTGCGCCATCCCCAGGAAGGACTGGAATGGAGTCTTCCCCGCTTTGCTCCTCGCCCAGGGAGAGCGGGTaGTCTTCACTCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: AAPSPGRTGMESSPLCSSPRESG*SSLSHS
Trigger: ACTGTGGCTGAGTGAAGAGCACCCGCTCTCCCTGGG...CGAGGAGCAAAGCGGGGAAGACTCCATTCCAGTCCTTCCTGGGGATGGCGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAGGGGCTATGGCTCAGTaGTCAGTGAGTGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGARCAPCPARCTRWALQGAMAQ*SVSDSC
Trigger: GCAGCTGTCACTCACTGAGCACTGAGCCATAGCCCC...TTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp CACCTTGGCCTCGTAGCCGCTAACAGTTTCCATCTTCTCAGACCGCCAGCCCCAGGAGATGGCAGAGGGTaGCCTGCGTGTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HLGLVAANSFHLLRPPAPGDGRG*PACPGR
Trigger: CCTGCCAGGACACGCAGGCCACCCTCTGCCATCTCC...TGGGGCTGGCGGTCTGAGAAGATGGAAACTGTTAGCGGCTACGAGGCCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GCCGGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGACCACCTGCCGGTCATaGTCCACTTCCATCACCAGG +
Preference number: 4 (lower is better)
Translates to: AGTHTELRGSSQPHRLLKTTCRS*STSITR
Trigger: CCTGGTGATGGAAGTGGACCATGACCGGCAGGTGGT...CTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAACCAGCTCCACGTTGGTaGCACTGTACACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GGARCAPCPARCTRWALQPAPRW*HCTPWP
Trigger: AGGCCAAGGTGTACAGTGCCACCAACGTGGAGCTGG...TTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GGCGGTTCTCTTTGCCCACGTTGGCATTGTGTCGAAGGAGCACTCTCACAGACTACGGGGGCCCCGGTGTaGGAGGAATGCTGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GGSLCPRWHCVEGALSQTTGAPV*EECCCA
Trigger: GGCGCAGCAGCATTCCTCCCACACCGGGGCCCCCGT...AGTCTGTGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GCCGGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGTGCTGGACATCTCGATaGGGCGGCCAATGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: AGTHTELRGSSQPHRLLKCWTSR*GGQCSV
Trigger: CACGGAACATTGGCCGCCCCATCGAGATGTCCAGCA...CTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CAA 72 bp GCCTCCTGCAGGACTGCCCAGCCCTGGCGGTTCTCTTaGCCCACGTTGGCATTGTGTCGAAGGAGCACTCTC +
Preference number: 4 (lower is better)
Translates to: ASCRTAQPWRFS*PTLALCRRSTL
Trigger: GAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGTCCTGCAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CAA 72 bp ACTATGACAGGCCCAGAGAGGGGTCTGCAAGAGCCCTaGTCCCGAGGCAAGTCCCCAGCCAGCTCTCAGACC +
Preference number: 4 (lower is better)
Translates to: TMTGPERGLQEP*SRGKSPASSQT
Trigger: GGTCTGAGAGCTGGCTGGGGACTTGCCTCGGGACAAGGGCTCTTGCAGACCCCTCTCTGGGCCTGTCATAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR TCA 90 bp GGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGGTGCCTGGCGAAGTTTGTTaGGCAGTTCCGGAATGCCCG +
Preference number: 4 (lower is better)
Translates to: GTHTELRGSSQPHRLLKVPGEVC*AVPECP
Trigger: CGGGCATTCCGGAACTGCTCAACAAACTTCGCCAGG...CACCTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp CATGACTCCTGCCCTCCAGGAGTGGAGTCCAGAGAGAAGCCAGCCGAGGGAGTGTGGCCATTAGGTCGATaGTGGGGGTCACCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: HDSCPPGVESREKPAEGVWPLGR*WGSPGH
Trigger: GTGACCAGGTGACCCCCATCATCGACCTAATGGCCA...CACTCCCTCGGCTGGCTTCTCTCTGGACTCCACTCCTGGAGGGCAGGAGTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR GCA 90 bp GGCACTTCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGCATCACCAGGGCTCCTaGCTCCTGGCCCTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: GTSNTVGSTSHGKGFPDAHHQGS*LLALED
Trigger: ATCTTCAAGGGCCAGGAGGCAGGAGCCCTGGTGATG...CGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGGTGTCCACATGCACCACCTaGCGGTCATGGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: GTHTELRGSSQPHRLLKVSTCTT*RSWSTS
Trigger: GGAAGTGGACCATGACCGGCAGGTGGTGCATGTGGA...CACCTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp AGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACAGTGTTTCGGGCTCCTaGAGAGTGAGCCCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RGSLRSMPSTLYPLGTSNSVSGS*RVSPSV
Trigger: GACACTGGGGCTCACTCTGCAGGAGCCCGAAACACT...GTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp TGGTCACCCAGGGAGAGCGGGTGCTCTTCACTCAGCCACAGTGTTGCCTTGAACGGCTCTGTGGACAGCTaGAGGCTTTCCTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: WSPRESGCSSLSHSVALNGSVDS*RLSWRA
Trigger: GGCCCTCCAGGAAAGCCTGCAGCTGTCCACAGAGCC...GTTCAAGGCAACACTGTGGCTGAGTGAAGAGCACCCGCTCTCCCTGGGTGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp CCAGGAGACTGGTGTCTACTCGCAGGCTCTCACCCCGCTTCCACACGCGGTACAAGGGCTCCTGCCTCCTaGCCCTTGAAGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PGDWCLLAGSHPASTRGTRAPAS*PLKMKL
Trigger: GAGCTTCATCTTCAAGGGCCAGGAGGCAGGAGCCCT...TGTACCGCGTGTGGAAGCGGGGTGAGAGCCTGCGAGTAGACACCAGTCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp CCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCTCGCACTCACCAGCTCCACGTTaGTGGCACTGTACACCTTGG +
Preference number: 4 (lower is better)
Translates to: PSTLYPLGTSNTVGSTSHSPAPR*WHCTPW
Trigger: CCAAGGTGTACAGTGCCACCAACGTGGAGCTGGTGA...GTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGGTGGCACGCTGTACCCGTTaGGCACTTCAAACACGGTGG +
Preference number: 4 (lower is better)
Translates to: GTHTELRGSSQPHRLLKVARCTR*ALQTRW
Trigger: CCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGC...CACCTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACAGGGGCACCCAGCTGGTaGACTCCCACTTCATCTCAA +
Preference number: 4 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATGAPSW*TPTSSQ
Trigger: TTGAGATGAAGTGGGAGTTCACCAGCTGGGTGCCCC...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp TCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCCTGGTCAGGCAGAGCTaGAGGTTGTCAGGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SMPSTLYPLGTSNTVGSTLVRQS*RLSGVW
Trigger: CCAAACTCCTGACAACCTGCAGCTCTGCCTGACCAG...GGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp CCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTGGGGTCCACCTCGCACTCCTGTTCAATGTCGTaGAGGGAGATGGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PSTLYPLGTSNTVGSTSHSCSMS*REMAEG
Trigger: ACCCTCTGCCATCTCCCTGCACGACATTGAACAGGA...GTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GCTCAGTGCTCAGTGAGTGACAGCTGCAGGATCCGCTGTAAGTCCTCCTCCTCCCAGAGAGGTGCTCCGTaGGTGTGCGTGTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: AQCSVSDSCRIRCKSSSSQRGAP*VCVSPA
Trigger: AGCTGGTGACACGCACACGCACGGAGCACCTCTCTG...GGAGGAGGAGGACTTACAGCGGATCCTGCAGCTGTCACTCACTGAGCACTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp TGGTCACCCAGGGAGAGCGGGTGCTCTTCACTCAGCCACAGTGTTGCCTTGAACGTGTGGGAGGAATGCTaGTGCGCCATCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WSPRESGCSSLSHSVALNVWEEC*CAIPRK
Trigger: CTTCCTGGGGATGGCGCAGCAGCATTCCTCCCACAC...GTTCAAGGCAACACTGTGGCTGAGTGAAGAGCACCCGCTCTCCCTGGGTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp CTAACTATGACAGGCCCAGAGAGGGGTCTGCAAGAGCCCTTGTCCCGAGGCAAGCCCAGGGAGAGCGGGTaGTCTTCACTCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: LTMTGPERGLQEPLSRGKPRESG*SSLSHS
Trigger: ACTGTGGCTGAGTGAAGAGCACCCGCTCTCCCTGGG...CTTGCCTCGGGACAAGGGCTCTTGCAGACCCCTCTCTGGGCCTGTCATAGTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR CCA 90 bp GCATTGTGTCGAAGGAGCACTCTCACAGACTCCAGGTTTCCCAGAGACACGGCCAGATGGCTGTGGGGTTaGTGGGGCTGGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ALCRRSTLTDSRFPRDTARWLWG*WGWLPA
Trigger: AGCAGGCAGCCAGCCCCACCAACCCCACAGCCATCT...GGCCGTGTCTCTGGGAAACCTGGAGTCTGTGAGAGTGCTCCTTCGACACAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp CCTGCTCAAGGCTCCTCACGAGGCAAGAGCGTAACTGTTCTGTTCCACCAAGGCATGATGGGGGTCACCTaGTCACCCAGGGAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PAQGSSRGKSVTVLFHQGMMGVT*SPRESG
Trigger: CCCGCTCTCCCTGGGTGACCAGGTGACCCCCATCAT...GCCTTGGTGGAACAGAACAGTTACGCTCTTGCCTCGTGAGGAGCCTTGAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR CCA 90 bp CACCTTGGCCTCGTAGCCGCTAACAGTTTCCATCTTCTCAGACCGCCAGCCCCAGCACTTCAAACACGGTaGGGTCCACCTCGCACGGGA +
Preference number: 4 (lower is better)
Translates to: HLGLVAANSFHLLRPPAPALQTR*GPPRTG
Trigger: TCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGC...TGGGGCTGGCGGTCTGAGAAGATGGAAACTGTTAGCGGCTACGAGGCCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
3UTR CAA 72 bp AGGACTGCCCAGCCCTGGCGGTTCTCTTTGCCCACGTaGGCATTGTGTCGAAGGAGCACTCTCACAGACTCC +
Preference number: 4 (lower is better)
Translates to: RTAQPWRFSLPT*ALCRRSTLTDS
Trigger: GGAGTCTGTGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACATCCGTGACTCCAGGCTaGAGTTGGGGTCGAAGTACT +
Preference number: 4 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATSVTPG*SWGRST
Trigger: AGTACTTCGACCCCAACTTCAGCCTGGAGTCACGGA...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp GTCCAGAGAGAAGCCAGCCGAGGGAGTGGGTCCCTAACTATGACAGGCCCAGAGTCCGTGACTCCAGGCTaGAGTTGGGGTCGAAGTACT +
Preference number: 4 (lower is better)
Translates to: VQREASRGSGSLTMTGPESVTPG*SWGRST
Trigger: AGTACTTCGACCCCAACTTCAGCCTGGAGTCACGGA...CTCTGGGCCTGTCATAGTTAGGGACCCACTCCCTCGGCTGGCTTCTCTCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR TCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACACGCAGCTTGGCAAAGTaGGCGTTGCTGATGGCCATT +
Preference number: 4 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATRSLAK*ALLMAI
Trigger: AATGGCCATCAGCAACGCTCACTTTGCCAAGCTGCG...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp AGAGAAGCCAGCCGAGGGAGTGGGTCCCTAACTATGACAGGCCCAGAGAGGGGTTGGATAAGGCAGACATaGCTCCTGCCCTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: REASRGSGSLTMTGPERGWIRQT*LLPSRS
Trigger: ACTCCTGGAGGGCAGGAGTCATGTCTGCCTTATCCA...ACCCCTCTCTGGGCCTGTCATAGTTAGGGACCCACTCCCTCGGCTGGCTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR GCA 90 bp TGGTCACCCAGGGAGAGCGGGTGCTCTTCACTCAGCCACAGTGTTGCCTTGAACTACTGGAGCACCAGCTaGACCATCTCGGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: WSPRESGCSSLSHSVALNYWSTS*TISGSP
Trigger: TGGAGACCCCGAGATGGTGCAGCTGGTGCTCCAGTA...GTTCAAGGCAACACTGTGGCTGAGTGAAGAGCACCCGCTCTCCCTGGGTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp CAGAGAGGTGCTCCGTGCGTGTGCGTGTCACCAGCTCCACGTTGGTGGCACTGTTCAGTGAGTGACAGCTaGAGGATCCGCTGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: QRGAPCVCVSPAPRWWHCSVSDS*RIRCKS
Trigger: GGACTTACAGCGGATCCTGCAGCTGTCACTCACTGA...ACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp CCATCTTCTCAGACCGCCAGCCCCAGATACCACATTTGTTCCTCTCAAAGGCCACTGGTGGCTGTGCAGTaGGGCCTCCAGTTCGCGATG +
Preference number: 4 (lower is better)
Translates to: PSSQTASPRYHICSSQRPLVAVQ*GLQFAM
Trigger: CATCGCGAACTGGAGGCCGCACTGCACAGCCACCAG...TGGCCTTTGAGAGGAACAAATGTGGTATCTGGGGCTGGCGGTCTGAGAAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp AGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACGCGGTACACATCGCTTaGGCACATCTTAGACACAAG +
Preference number: 4 (lower is better)
Translates to: RGSLRSMPSTLYPLGTSNAVHIA*AHLRHK
Trigger: CTTGTGTCTAAGATGTGCCCAAGCGATGTGTACCGC...GTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACATTACGAGTGTCCAGGTaGGTGGAGACGATAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATLRVSR*VETIGE
Trigger: CTCTCCTATCGTCTCCACCCACCTGGACACTCGTAA...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp TCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGCAACACAGGAAGGACTGGAATaGAGTCTTCCCCGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SNTVGSTSHGKGFPDAATQEGLE*SLPRFA
Trigger: AGCAAAGCGGGGAAGACTCCATTCCAGTCCTTCCTG...TGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp GGGCTGAGGACCATGGATAAGGCAGACATGACTCCTGCCCTCCAGGAGTGGAGTACCTCTGTACTTTGCTaGACATCTCGATGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GLRTMDKADMTPALQEWSTSVLC*TSRWGG
Trigger: GCCGCCCCATCGAGATGTCCAGCAAAGTACAGAGGT...ACTCCACTCCTGGAGGGCAGGAGTCATGTCTGCCTTATCCATGGTCCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR CCA 90 bp GGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAACGGGCATTGAGCACGTaGAAAAGGGGAATCTCAATT +
Preference number: 4 (lower is better)
Translates to: GGARCAPCPARCTRWALQRALST*KRGISI
Trigger: AATTGAGATTCCCCTTTTCCACGTGCTCAATGCCCG...TTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CCA 90 bp CCATCTTCTCAGACCGCCAGCCCCAGATACCACATTTGTTCCTCTCAAAGGCCAGTTCCTCATAAACCGTaGCCTGGGGAGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PSSQTASPRYHICSSQRPVPHKP*PGEEGG
Trigger: CCCGCCCTCCTCCCCAGGCCACGGTTTATGAGGAAC...TGGCCTTTGAGAGGAACAAATGTGGTATCTGGGGCTGGCGGTCTGAGAAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp GATAAGGCAGACATGACTCCTGCCCTCCAGGAGTGGAGTCCAGAGAGAAGCCAGCGCAGCTTGGCAAAGTaGGCGTTGCTGATGGCCATT +
Preference number: 4 (lower is better)
Translates to: DKADMTPALQEWSPERSQRSLAK*ALLMAI
Trigger: AATGGCCATCAGCAACGCTCACTTTGCCAAGCTGCG...CTGGCTTCTCTCTGGACTCCACTCCTGGAGGGCAGGAGTCATGTCTGCCTTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR TCA 90 bp ACCAAGGCAGACGCTCCACTCCCAGGCCACGTCGCTGGGGGCCCTTCCCACTGTCCCAGCAGGTACTCATaGAATTCAATAGAAAACCAT +
Preference number: 4 (lower is better)
Translates to: TKADAPLPGHVAGGPSHCPSRYS*NSIENH
Trigger: ATGGTTTTCTATTGAATTTCATGAGTACCTGCTGGG...ACAGTGGGAAGGGCCCCCAGCGACGTGGCCTGGGAGTGGAGCGTCTGCCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR GCA 90 bp CCATCTTCTCAGACCGCCAGCCCCAGATACCACATTTGTTCCTCTCAAAGGCCAGTCTCCAGTGCTGACTaGCTCCTGCAGGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: PSSQTASPRYHICSSQRPVSSAD*LLQDCP
Trigger: TGGGCAGTCCTGCAGGAGGCAGTCAGCACTGGAGAC...TGGCCTTTGAGAGGAACAAATGTGGTATCTGGGGCTGGCGGTCTGAGAAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GGGCTGAGGACCATGGATAAGGCAGACATGACTCCTGCCCTCCAGGAGTGGAGTACTCAGCCACAGTGTTaGCTTGAACCTGCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GLRTMDKADMTPALQEWSTQPQC*LEPAQG
Trigger: GCCTTGAGCAGGTTCAAGGCAACACTGTGGCTGAGT...ACTCCACTCCTGGAGGGCAGGAGTCATGTCTGCCTTATCCATGGTCCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR GCA 90 bp AGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACACTCAGCCACAGTGTTaGCTTGAACCTCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: RGSLRSMPSTLYPLGTSNTQPQC*LEPLYF
Trigger: AAAGTACAGAGGTTCAAGGCAACACTGTGGCTGAGT...GTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR GCA 90 bp GATAAGGCAGACATGACTCCTGCCCTCCAGGAGTGGAGTCCAGAGAGAAGCCAGCTCACCTCTGTACTTTaGTGGACATCTCGATGGGGC +
Preference number: 4 (lower is better)
Translates to: DKADMTPALQEWSPERSQLTSVL*WTSRWG
Trigger: GCCCCATCGAGATGTCCAGCAAAGTACAGAGGTGAG...CTGGCTTCTCTCTGGACTCCACTCCTGGAGGGCAGGAGTCATGTCTGCCTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR CCA 90 bp CCATCTTCTCAGACCGCCAGCCCCAGATACCACATTTGTTCCTCTCAAAGGCCAACCTCTGTACTTTGCTaGACATCTCGATGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PSSQTASPRYHICSSQRPTSVLC*TSRWGG
Trigger: GCCGCCCCATCGAGATGTCCAGCAAAGTACAGAGGT...TGGCCTTTGAGAGGAACAAATGTGGTATCTGGGGCTGGCGGTCTGAGAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR TCA 90 bp GTGGCACCATCCATTCATCAAAGACAAACTACCGGTTTTCTGTGCCAAGCCCCTGCCACAGTGTTGCCTTaGACCTGCTCAAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VAPSIHQRQTTGFLCQAPATVLP*TCSRLL
Trigger: GAGGAGCCTTGAGCAGGTTCAAGGCAACACTGTGGC...AGGGGCTTGGCACAGAAAACCGGTAGTTTGTCTTTGATGAATGGATGGTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR CCA 90 bp GTGGCACCATCCATTCATCAAAGACAAACTACCGGTTTTCTGTGCCAAGCCCCTTGCTGGACATCTCGATaGGGCGGCCAATGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: VAPSIHQRQTTGFLCQAPCWTSR*GGQCSV
Trigger: CACGGAACATTGGCCGCCCCATCGAGATGTCCAGCA...AGGGGCTTGGCACAGAAAACCGGTAGTTTGTCTTTGATGAATGGATGGTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR CCA 90 bp GTGGCACCATCCATTCATCAAAGACAAACTACCGGTTTTCTGTGCCAAGCCCCTAGCCAGCCGAGGGAGTaGGTCCCTAACTATGACAGG +
Preference number: 4 (lower is better)
Translates to: VAPSIHQRQTTGFLCQAPSQPRE*VPNYDR
Trigger: CCTGTCATAGTTAGGGACCCACTCCCTCGGCTGGCT...AGGGGCTTGGCACAGAAAACCGGTAGTTTGTCTTTGATGAATGGATGGTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR TCA 90 bp ATACATGGGTGGCACCATCCATTCATCAAAGACAAACTACCGGTTTTCTGTGCCGCGGCCAATGTTCCGTaGCTCCAGGCTGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: IHGWHHPFIKDKLPVFCAAANVP*LQAEVG
Trigger: CCCAACTTCAGCCTGGAGTCACGGAACATTGGCCGC...GGCACAGAAAACCGGTAGTTTGTCTTTGATGAATGGATGGTGCCACCCATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR CCA 90 bp GATAAGGCAGACATGACTCCTGCCCTCCAGGAGTGGAGTCCAGAGAGAAGCCAGATAGAAAACCATACATaGGTGGCACCATCCATTCAT +
Preference number: 4 (lower is better)
Translates to: DKADMTPALQEWSPERSQIENHT*VAPSIH
Trigger: ATGAATGGATGGTGCCACCCATGTATGGTTTTCTAT...CTGGCTTCTCTCTGGACTCCACTCCTGGAGGGCAGGAGTCATGTCTGCCTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS CCA 90 bp GTTCGCGATGCCGGTTCGCCCAGACGAGCCGGTGCAGCGGGAAGGTaGGGCCCGGGCCGGCCATGCTGGGCCTCAGCGCCGCATCCCGGC +
Preference number: 5 (lower is better)
Translates to: VRDAGSPRRAGAAGR*GPGRPCWASAPHPG
Trigger: GCCGGGATGCGGCGCTGAGGCCCAGCATGGCCGGCCCGGGCCCCACCTTCCCGCTGCACCGGCTCGTCTGGGCGAACCGGCATCGCGAAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308440.11
ENST00000447274.7
ENST00000511455.7
ENST00000512101.5
ENST00000513460.5
CDS CCA 90 bp GTGCCCTGCTCTGCTCAGATGCCGCTGCCCGCCTCCCCCGGGAGCTaGTGTCCTGGCCACGTGGCCCAAGCTGCCCTCCTCCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: VPCSAQMPLPASPGS*CPGHVAQAALLPGP
Trigger: GGGCCCAGGGAGGAGGGCAGCTTGGGCCACGTGGCCAGGACACCAGCTCCCGGGGGAGGCGGGCAGCGGCATCTGAGCAGAGCAGGGCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS GCA 90 bp CACCTTCTGCCTGGCCTGGAGTGCCCTGCTCTGCTCAGATGCCGCTaGCCGCCTCCCCCGGGAGCTGGTGTCCTGGCCACGTGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: HLLPGLECPALLRCR*PPPPGAGVLATWPK
Trigger: CTTGGGCCACGTGGCCAGGACACCAGCTCCCGGGGGAGGCGGGCAGCGGCATCTGAGCAGAGCAGGGCACTCCAGGCCAGGCAGAAGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS GCA 90 bp TTTGGCGGAACCTGGTGGCTGTGCAGTGCGGCCTCCAGTTCGCGATaGCGGTTCGCCCAGACGAGCCGGTGCAGCGGGAAGGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: FGGTWWLCSAASSSR*RFAQTSRCSGKVGP
Trigger: GGGCCCCACCTTCCCGCTGCACCGGCTCGTCTGGGCGAACCGGCATCGCGAACTGGAGGCCGCACTGCACAGCCACCAGGTTCCGCCAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS GCA 90 bp TCAATGTCGTGCTGGTGGCTGTGCAGTGCGGCCTCCAGTTCGCGATaGCGGTTCGCCCAGACGAGCCGGTGCAGCGGGAAGGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: SMSCWWLCSAASSSR*RFAQTSRCSGKVGP
Trigger: GGGCCCCACCTTCCCGCTGCACCGGCTCGTCTGGGCGAACCGGCATCGCGAACTGGAGGCCGCACTGCACAGCCACCAGCACGACATTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000447274.7
ENST00000511455.7
ENST00000512101.5
ENST00000513460.5
CDS GCA 90 bp CGGGCACCGGGCCGGGTGTTGGTCAGGGCTTCCCAGACGGTCACCTaGAGCCACCAGAGCCCACAGCTGTCACTTCTGCCGTGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: RAPGRVLVRASQTVT*SHQSPQLSLLPCGC
Trigger: GCAGCCACACGGCAGAAGTGACAGCTGTGGGCTCTGGTGGCTGCAGGTGACCGTCTGGGAAGCCCTGACCAACACCCGGCCCGGTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507915.1
CDS GCA 90 bp TTTACCCACCTTCTGCCTGGCCTGGAGTGCCCTGCTCTGCTCAGATaGCGCTGCCCGCCTCCCCCGGGAGCTGGTGTCCTGGCCACGTGG +
Preference number: 5 (lower is better)
Translates to: FTHLLPGLECPALLR*RCPPPPGAGVLATW
Trigger: CCACGTGGCCAGGACACCAGCTCCCGGGGGAGGCGGGCAGCGGCATCTGAGCAGAGCAGGGCACTCCAGGCCAGGCAGAAGGTGGGTAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS CCA 90 bp GCTGTCACTTCTGCCGTGTGGCTGCAGAGGCCAGAGCCCACCCCCTaGGCAAGTCCCACCTGCTCCGCCTCAGTGCCCGCTTCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: AVTSAVWLQRPEPTP*ASPTCSASVPASSR
Trigger: CCTGCTTGAAGCGGGCACTGAGGCGGAGCAGGTGGGACTTGCCCAGGGGGTGGGCTCTGGCCTCTGCAGCCACACGGCAGAAGTGACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507915.1
CDS GCA 90 bp GAGGACTGCCCTCTGGTTCGTGGGCAGCTGCCTTTACCCACCTTCTaGCTGGCCTGGAGTGCCCTGCTCTGCTCAGATGCCGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: EDCPLVRGQLPLPTF*LAWSALLCSDAAAR
Trigger: GCGGGCAGCGGCATCTGAGCAGAGCAGGGCACTCCAGGCCAGGCAGAAGGTGGGTAAAGGCAGCTGCCCACGAACCAGAGGGCAGTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS-3UTR CAA 90 bp ACCAAGGCAGACGCTCCACTCCCAGGCCACGTCGCTGGGGGCCCTTCCCACTGTGGTCTGCAAGAGCCCTaGTCCCGAGGCAAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: TKADAPLPGHVAGGPSHCGLQEP*SRGKSP
Trigger: TGGGGACTTGCCTCGGGACAAGGGCTCTTGCAGACC...ACAGTGGGAAGGGCCCCCAGCGACGTGGCCTGGGAGTGGAGCGTCTGCCTTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS GCA 90 bp ATCGGGGGCCTAAGAGAAACCAGAGCTGCTTGTCAGCGCCCTGCCTaGTGCTGGCTCCAGCAGGCCTGGGAGCCCCTTGTCCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: IGGLRETRAACQRPA*CWLQQAWEPLVHSQ
Trigger: CTGGCTGTGGACAAGGGGCTCCCAGGCCTGCTGGAGCCAGCAGCAGGCAGGGCGCTGACAAGCAGCTCTGGTTTCTCTTAGGCCCCCGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512101.5
CDS CCA 90 bp CACTCTCACAGACTCCAGGTTTCCCAGAGACACGGCCAGCTCCAGTaGGGTCCGCCCGCGGGGGTCCTCCTGTTCAATGTCGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HSHRLQVSQRHGQLQ*GPPAGVLLFNVVLG
Trigger: CCCCAGCACGACATTGAACAGGAGGACCCCCGCGGGCGGACCCCACTGGAGCTGGCCGTGTCTCTGGGAAACCTGGAGTCTGTGAGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514779.2
CDS TCA 90 bp CACCCAGGGAGAGCGGGTGCTCTTCACTCAGCCACAGTGTTGCCTTaGACCTGCCCAGCCGACCACAGGACATGGGTGAGGCACGGCTGG +
Preference number: 5 (lower is better)
Translates to: HPGRAGALHSATVLP*TCPADHRTWVRHGW
Trigger: CCAGCCGTGCCTCACCCATGTCCTGTGGTCGGCTGGGCAGGTTCAAGGCAACACTGTGGCTGAGTGAAGAGCACCCGCTCTCCCTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS CCA 90 bp CACTCTCACAGACTCCAGGTTTCCCAGAGACACGGCCAGCTCCAGTaGGGTCCGCCCGCGGGGGTCCTCCTGTTCAATGTCGTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HSHRLQVSQRHGQLQ*GPPAGVLLFNVVLV
Trigger: CACCAGCACGACATTGAACAGGAGGACCCCCGCGGGCGGACCCCACTGGAGCTGGCCGTGTCTCTGGGAAACCTGGAGTCTGTGAGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000447274.7
ENST00000511455.7
ENST00000512101.5
ENST00000513460.5
CDS CCA 90 bp GCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTaGGGTCCACCTCGCACGGGAAAGGGTTCCCTAGGCAGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: APCPARCTRWALQTR*GPPRTGKGSLGRWQ
Trigger: CTGCCACCTGCCTAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507915.1
CDS-3UTR CAA 90 bp TTTCCCAGAGACACGGCCAGCTCCAGTGGGGTCCGCCCGCGGGGGTCCTCCTGTGACTCCAGGCTGAAGTaGGGGTCGAAGTACTCCTCA +
Preference number: 5 (lower is better)
Translates to: FPRDTASSSGVRPRGSSCDSRLK*GSKYSS
Trigger: TGAGGAGTACTTCGACCCCAACTTCAGCCTGGAGTC...ACAGGAGGACCCCCGCGGGCGGACCCCACTGGAGCTGGCCGTGTCTCTGGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CAA 90 bp AAGGCAGACGCTCCACTCCCAGGCCACGTCGCTGGGGGCCCTTCCCACTGTGCCGACTCCAGGCTGAAGTaGGGGTCGAAGTACTCCTCA +
Preference number: 5 (lower is better)
Translates to: KADAPLPGHVAGGPSHCADSRLK*GSKYSS
Trigger: TGAGGAGTACTTCGACCCCAACTTCAGCCTGGAGTC...GGCACAGTGGGAAGGGCCCCCAGCGACGTGGCCTGGGAGTGGAGCGTCTGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS-3UTR CAA 90 bp TGGTCACCCAGGGAGAGCGGGTGCTCTTCACTCAGCCACAGTGTTGCCTTGAACGCACCGGGCCGGGTGTaGGTCAGGGCTTCCCAGACG +
Preference number: 5 (lower is better)
Translates to: WSPRESGCSSLSHSVALNAPGRV*VRASQT
Trigger: CGTCTGGGAAGCCCTGACCAACACCCGGCCCGGTGC...GTTCAAGGCAACACTGTGGCTGAGTGAAGAGCACCCGCTCTCCCTGGGTGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS TCA 90 bp GCCGACCACAGGACATGGGTGAGGCACGGCTGGTGGCCCTTCCATTaGGGACTGCCCTCTGGTTCGTGGGCAGCTGCCTTTACCCACCTT +
Preference number: 5 (lower is better)
Translates to: ADHRTWVRHGWWPFH*GLPSGSWAAAFTHL
Trigger: AAGGTGGGTAAAGGCAGCTGCCCACGAACCAGAGGGCAGTCCTCAATGGAAGGGCCACCAGCCGTGCCTCACCCATGTCCTGTGGTCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS GCA 90 bp CTGGTGGCCCTTCCATTGAGGACTGCCCTCTGGTTCGTGGGCAGCTaGCTTTACCCACCTTCTGCCTGGCCTGGAGTGCCCTGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LVALPLRTALWFVGS*LYPPSAWPGVPCSA
Trigger: AGCAGAGCAGGGCACTCCAGGCCAGGCAGAAGGTGGGTAAAGGCAGCTGCCCACGAACCAGAGGGCAGTCCTCAATGGAAGGGCCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS GCA 90 bp AGAAATCGGGGGCCTAAGAGAAACCAGAGCTGCTTGTCAGCGCCCTaGCTGCTGCTGGCTCCAGCAGGCCTGGGAGCCCCTTGTCCACAG +
Preference number: 5 (lower is better)
Translates to: RNRGPKRNQSCLSAP*LLLAPAGLGAPCPQ
Trigger: CTGTGGACAAGGGGCTCCCAGGCCTGCTGGAGCCAGCAGCAGGCAGGGCGCTGACAAGCAGCTCTGGTTTCTCTTAGGCCCCCGATTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512101.5
CDS CCA 90 bp GTAGGGGCCCATGATGTGGGTGAGCCCTGTGTACTCCGCAGGGGCTaGGCACTCAGGCCCGCTGAGTTCCCACAAATGCTCAGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: VGAHDVGEPCVLRRG*ALRPAEFPQMLRVS
Trigger: GGAAACCCTGAGCATTTGTGGGAACTCAGCGGGCCTGAGTGCCCAGCCCCTGCGGAGTACACAGGGCTCACCCACATCATGGGCCCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506531.5
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS-3UTR CAA 90 bp GCAGGAGGTCATCGTCCTCGTCCCGGAGGGGCTCGTTGCGCTCCATGCCCAGCATTGCCCACGTTGGCATaGTGTCGAAGGAGCACTCTC +
Preference number: 5 (lower is better)
Translates to: AGGHRPRPGGARCAPCPALPTLA*CRRSTL
Trigger: GAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAA...TGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS TCA 90 bp CCACAGTGTTGCCTTGAACCTGCCCAGCCGACCACAGGACATGGGTaGGGCACGGCTGGTGGCCCTTCCATTGAGGACTGCCCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: PQCCLEPAQPTTGHG*GTAGGPSIEDCPLV
Trigger: AACCAGAGGGCAGTCCTCAATGGAAGGGCCACCAGCCGTGCCTCACCCATGTCCTGTGGTCGGCTGGGCAGGTTCAAGGCAACACTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS GCA 90 bp TACTCCGCAGGGGCTGGGCACTCAGGCCCGCTGAGTTCCCACAAATaGTCAGGGTTTCCAGAGCCCAGGGGCTACTCTGGGATGGATGTG +
Preference number: 5 (lower is better)
Translates to: YSAGAGHSGPLSSHK*SGFPEPRGYSGMDV
Trigger: CACATCCATCCCAGAGTAGCCCCTGGGCTCTGGAAACCCTGAGCATTTGTGGGAACTCAGCGGGCCTGAGTGCCCAGCCCCTGCGGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506531.5
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS-3UTR CAA 90 bp GGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAACAGGTTGTCAGGAGTTaGGCGGAACCTGGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: GGARCAPCPARCTRWALQQVVRS*AEPGGC
Trigger: ACAGCCACCAGGTTCCGCCAAACTCCTGACAACCTG...TTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CAA 90 bp GGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAAGGCAGAGCTGCAGGTaGTCAGGAGTTTGGCGGAAC +
Preference number: 5 (lower is better)
Translates to: GGARCAPCPARCTRWALQRQSCR*SGVWRN
Trigger: GTTCCGCCAAACTCCTGACAACCTGCAGCTCTGCCT...TTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS GCA 90 bp CAGGGTGGTGCCCTGCCATGGTACCCCACCTCCATAACTGTGCCCTaGTGTACCTGGCGAAGTTTGTTGAGCAGTTCCGGAATGCCCGCC +
Preference number: 5 (lower is better)
Translates to: QGGALPWYPTSITVP*CTWRSLLSSSGMPA
Trigger: GGCGGGCATTCCGGAACTGCTCAACAAACTTCGCCAGGTACAGCAGGGCACAGTTATGGAGGTGGGGTACCATGGCAGGGCACCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513460.5
CDS CCA 90 bp GCCCTGCCATGGTACCCCACCTCCATAACTGTGCCCTGCTGTACCTaGCGAAGTTTGTTGAGCAGTTCCGGAATGCCCGCCAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: ALPWYPTSITVPCCT*RSLLSSSGMPASLC
Trigger: GCAGAGGCTGGCGGGCATTCCGGAACTGCTCAACAAACTTCGCCAGGTACAGCAGGGCACAGTTATGGAGGTGGGGTACCATGGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513460.5
CDS CCA 90 bp TTCCAAGGCCAGGCCTGGCACAGTAACCAGGGTGGTGCCCTGCCATaGTACCCCACCTCCATAACTGTGCCCTGCTGTACCTGGCGAAGT +
Preference number: 5 (lower is better)
Translates to: FQGQAWHSNQGGALP*YPTSITVPCCTWRS
Trigger: ACTTCGCCAGGTACAGCAGGGCACAGTTATGGAGGTGGGGTACCATGGCAGGGCACCACCCTGGTTACTGTGCCAGGCCTGGCCTTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513460.5
CDS-3UTR CAA 90 bp GCTGCGCCATCCCCAGGAAGGACTGGAATGGAGTCTTCCCCGCTTTGCTCCTCGCCCTGGCGGTTCTCTTaGCCCACGTTGGCATTGTGT +
Preference number: 5 (lower is better)
Translates to: AAPSPGRTGMESSPLCSSPWRFS*PTLALC
Trigger: ACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGG...CGAGGAGCAAAGCGGGGAAGACTCCATTCCAGTCCTTCCTGGGGATGGCGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CAA 90 bp AGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACGCCTGGCGAAGTTTGTaGAGCAGTTCCGGAATGCCC +
Preference number: 5 (lower is better)
Translates to: RGSLRSMPSTLYPLGTSNAWRSL*SSSGMP
Trigger: GGGCATTCCGGAACTGCTCAACAAACTTCGCCAGGC...GTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CAA 90 bp CCCCGCTTTGCTCCTCGACTTGTCCTGATCAGAGAGGTGCTCCGTGCGTGTGCGGGGGCCTGGCGAAGTTaGTTGAGCAGTTCCGGAATG +
Preference number: 5 (lower is better)
Translates to: PRFAPRLVLIREVLRACAGAWRS*LSSSGM
Trigger: CATTCCGGAACTGCTCAACAAACTTCGCCAGGCCCC...CGCACACGCACGGAGCACCTCTCTGATCAGGACAAGTCGAGGAGCAAAGCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CAA 90 bp TGGTCACCCAGGGAGAGCGGGTGCTCTTCACTCAGCCACAGTGTTGCCTTGAACCCTGCCTCCTGGCCCTaGAAGATGAAGCTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: WSPRESGCSSLSHSVALNPASWP*KMKLLR
Trigger: CCGGAGGAGCTTCATCTTCAAGGGCCAGGAGGCAGG...GTTCAAGGCAACACTGTGGCTGAGTGAAGAGCACCCGCTCTCCCTGGGTGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CAA 90 bp GGCACTTCAAACACGGTGGGGTCCACCTCGCACGGGAAAGGGTTCCCTGATGCGGTCACCAGCTCCACGTaGGTGGCACTGTACACCTTG +
Preference number: 5 (lower is better)
Translates to: GTSNTVGSTSHGKGFPDAVTSST*VALYTL
Trigger: CAAGGTGTACAGTGCCACCAACGTGGAGCTGGTGAC...CGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CAA 90 bp AGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAAACAGCACGCTGTACCCGTaGGGCACTTCAAACACGGTG +
Preference number: 5 (lower is better)
Translates to: RGSLRSMPSTLYPLGTSNSTLYP*GTSNTV
Trigger: CACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCT...GTTTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS GCA 90 bp GCCCCTTGTCCTCTGCAGTACCTGCCCAGCCCTGGCGGTTCTCTTTaGCCACGTTGGCATTGTGTCGAAGGAGCACTCTCACAGACTCCA +
Preference number: 5 (lower is better)
Translates to: APCPLQYLPSPGGSL*PRWHCVEGALSQTP
Trigger: TGGAGTCTGTGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGGTACTGCAGAGGACAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447274.7
CDS-3UTR CAA 90 bp GAGAGAAGCCAGCCGAGGGAGTGGGTCCCTAACTATGACAGGCCCAGAGAGGGGAGCCACAGTGTTGCCTaGAACCTGCTCAAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: ERSQPREWVPNYDRPREGSHSVA*NLLKAP
Trigger: AGGAGCCTTGAGCAGGTTCAAGGCAACACTGTGGCT...CCCCTCTCTGGGCCTGTCATAGTTAGGGACCCACTCCCTCGGCTGGCTTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS GCA 90 bp ACTTCATCTCAACGTAGAAATCGGGGGCCTAAGAGAAACCAGAGCTaGTTGTCAGCGCCCTGCCTGCTGCTGGCTCCAGCAGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: TSSQRRNRGPKRNQS*LSAPCLLLAPAGLG
Trigger: TCCCAGGCCTGCTGGAGCCAGCAGCAGGCAGGGCGCTGACAAGCAGCTCTGGTTTCTCTTAGGCCCCCGATTTCTACGTTGAGATGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512101.5
CDS CCA 90 bp CCTCTGCAGTACCTGCCCAGCCCTGGCGGTTCTCTTTGCCCACGTTaGCATTGTGTCGAAGGAGCACTCTCACAGACTCCAGGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: PLQYLPSPGGSLCPR*HCVEGALSQTPGFP
Trigger: TGGGAAACCTGGAGTCTGTGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGGTACTGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447274.7
CDS CCA 90 bp CCCACAAATGCTCAGGGTTTCCAGAGCCCAGGGGCTACTCTGGGATaGATGTGGAGAGGAGCTGAGTTCCTGGACCTCATCTCCTACCCC +
Preference number: 5 (lower is better)
Translates to: PTNAQGFQSPGATLG*MWRGAEFLDLISYP
Trigger: GGGGTAGGAGATGAGGTCCAGGAACTCAGCTCCTCTCCACATCCATCCCAGAGTAGCCCCTGGGCTCTGGAAACCCTGAGCATTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506531.5
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS-3UTR CAA 90 bp CCCCGCTTTGCTCCTCGACTTGTCCTGATCAGAGAGGTGCTCCGTGCGTGTGCGTTCTCTTTGCCCACGTaGGCATTGTGTCGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: PRFAPRLVLIREVLRACAFSLPT*ALCRRS
Trigger: GCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAA...CGCACACGCACGGAGCACCTCTCTGATCAGGACAAGTCGAGGAGCAAAGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CAA 90 bp GGAGGGGCTCGTTGCGCTCCATGCCCAGCACGCTGTACCCGTTGGGCACTTCAATTGAACCTCTGTACTTaGCTGGACATCTCGATGGGG +
Preference number: 5 (lower is better)
Translates to: GGARCAPCPARCTRWALQLNLCT*LDISMG
Trigger: CCCCATCGAGATGTCCAGCAAAGTACAGAGGTTCAA...TTGAAGTGCCCAACGGGTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CAA 90 bp GCCGGCACCCACACGGAGCTCAGGGGCTCATCACAGCCACACAGGTTGCTGAAGAGCCACAGTGTTGCCTaGAACCTCTGTACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: AGTHTELRGSSQPHRLLKSHSVA*NLCTLL
Trigger: CAGCAAAGTACAGAGGTTCAAGGCAACACTGTGGCT...CTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CAA 90 bp CAGAGAGGTGCTCCGTGCGTGTGCGTGTCACCAGCTCCACGTTGGTGGCACTGTAGGGGAATCTCAATTTaGACGGGGAAGCCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: QRGAPCVCVSPAPRWWHCRGISI*TGKPGG
Trigger: TCCACCTGGCTTCCCCGTCAAAATTGAGATTCCCCT...ACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS-3UTR CAA 90 bp CAGAGAGGTGCTCCGTGCGTGTGCGTGTCACCAGCTCCACGTTGGTGGCACTGTCCCCAGATACCACATTaGTTCCTCTCAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: QRGAPCVCVSPAPRWWHCPQIPH*FLSKAT
Trigger: TGTGGCCTTTGAGAGGAACAAATGTGGTATCTGGGG...ACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS TCA 90 bp AGCTGCTCTTCAAAGCTGGGTTTACCTTTGCTCCTCGACTTGTCCTaGTCAGAGAGGTGCTCCGTGCGTGTGCGTGTCACCAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: SCSSKLGLPLLLDLS*SERCSVRVRVTSST
Trigger: CGTGGAGCTGGTGACACGCACACGCACGGAGCACCTCTCTGATCAGGACAAGTCGAGGAGCAAAGGTAAACCCAGCTTTGAAGAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508417.5
ENST00000508422.1
CDS CCA 90 bp GAGTTCCCACAAATGCTCAGGGTTTCCAGAGCCCAGGGGCTACTCTaGGATGGATGTGGAGAGGAGCTGAGTTCCTGGACCTCATCTCCT +
Preference number: 5 (lower is better)
Translates to: EFPQMLRVSRAQGLL*DGCGEELSSWTSSP
Trigger: AGGAGATGAGGTCCAGGAACTCAGCTCCTCTCCACATCCATCCCAGAGTAGCCCCTGGGCTCTGGAAACCCTGAGCATTTGTGGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506531.5
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS CCA 90 bp AAGTCCCTGCTCCAGGTAATCTGCATTCTTCAGGAGGCCCAAAGCTaGCAAGGCTTCTCTTCCAAAGGGTCCAGTCTCTCCCACGTGAGC +
Preference number: 5 (lower is better)
Translates to: KSLLQVICILQEAQS*QGFSSKGSSLSHVS
Trigger: GCTCACGTGGGAGAGACTGGACCCTTTGGAAGAGAAGCCTTGCCAGCTTTGGGCCTCCTGAAGAATGCAGATTACCTGGAGCAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512101.5
CDS-3UTR CAA 90 bp TGGGTGGCACCATCCATTCATCAAAGACAAACTACCGGTTTTCTGTGCCAAGCCTCTGTGCCAAGCCCCTaGCTAAGGGCTGAGGACCAT +
Preference number: 5 (lower is better)
Translates to: WVAPSIHQRQTTGFLCQASVPSP*LRAEDH
Trigger: ATGGTCCTCAGCCCTTAGCAAGGGGCTTGGCACAGA...GGCTTGGCACAGAAAACCGGTAGTTTGTCTTTGATGAATGGATGGTGCCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS GCA 90 bp GCCATAATCCACCGAGTCAACCTGAAGTCCCTGCTCCAGGTAATCTaGATTCTTCAGGAGGCCCAAAGCTGGCAAGGCTTCTCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: AIIHRVNLKSLLQVI*ILQEAQSWQGFSSK
Trigger: TTTGGAAGAGAAGCCTTGCCAGCTTTGGGCCTCCTGAAGAATGCAGATTACCTGGAGCAGGGACTTCAGGTTGACTCGGTGGATTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512101.5
CDS-3UTR CAA 90 bp ATACATGGGTGGCACCATCCATTCATCAAAGACAAACTACCGGTTTTCTGTGCCCCTCACCTCTGTACTTaGCTGGACATCTCGATGGGG +
Preference number: 5 (lower is better)
Translates to: IHGWHHPFIKDKLPVFCAPHLCT*LDISMG
Trigger: CCCCATCGAGATGTCCAGCAAAGTACAGAGGTGAGG...GGCACAGAAAACCGGTAGTTTGTCTTTGATGAATGGATGGTGCCACCCATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506119.1
CDS CCA 72 bp GCCGGTTCGCCCAGACGAGCCGGTGCAGCGGGAAGGTaGGGCCCGGGCCGGCCATGCTGGGCCTCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: AGSPRRAGAAGR*GPGRPCWASAP
Trigger: CGGCGCTGAGGCCCAGCATGGCCGGCCCGGGCCCCACCTTCCCGCTGCACCGGCTCGTCTGGGCGAACCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308440.11
ENST00000447274.7
ENST00000511455.7
ENST00000512101.5
ENST00000513460.5
CDS GCA 72 bp TCCAGTTCGCGATGCCGGTTCGCCCAGACGAGCCGGTaGAGCGGGAAGGTGGGGCCCGGGCCGGCCATGCTG +
Preference number: 6 (lower is better)
Translates to: SSSRCRFAQTSR*SGKVGPGPAML
Trigger: CAGCATGGCCGGCCCGGGCCCCACCTTCCCGCTGCACCGGCTCGTCTGGGCGAACCGGCATCGCGAACTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308440.11
ENST00000447274.7
ENST00000511455.7
ENST00000512101.5
ENST00000513460.5
CDS GCA 72 bp ACCTGGTGGCTGTGCAGTGCGGCCTCCAGTTCGCGATaGCGGTTCGCCCAGACGAGCCGGTGCAGCGGGAAG +
Preference number: 6 (lower is better)
Translates to: TWWLCSAASSSR*RFAQTSRCSGK
Trigger: CTTCCCGCTGCACCGGCTCGTCTGGGCGAACCGGCATCGCGAACTGGAGGCCGCACTGCACAGCCACCAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308440.11
CDS GCA 72 bp TGCTGGTGGCTGTGCAGTGCGGCCTCCAGTTCGCGATaGCGGTTCGCCCAGACGAGCCGGTGCAGCGGGAAG +
Preference number: 6 (lower is better)
Translates to: CWWLCSAASSSR*RFAQTSRCSGK
Trigger: CTTCCCGCTGCACCGGCTCGTCTGGGCGAACCGGCATCGCGAACTGGAGGCCGCACTGCACAGCCACCAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000447274.7
ENST00000511455.7
ENST00000512101.5
ENST00000513460.5
CDS GCA 72 bp CCCGCCTGCCAGCCTCAGGGGGAGCCCCTTGTCCTCTaGAGTACCTGCCCAGCCCTGGCGGTTCTCTTTGCC +
Preference number: 6 (lower is better)
Translates to: PACQPQGEPLVL*STCPALAVLFA
Trigger: GGCAAAGAGAACCGCCAGGGCTGGGCAGGTACTGCAGAGGACAAGGGGCTCCCCCTGAGGCTGGCAGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447274.7
CDS GCA 72 bp TTACCCACCTTCTGCCTGGCCTGGAGTGCCCTGCTCTaGTCAGATGCCGCTGCCCGCCTCCCCCGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LPTFCLAWSALL*SDAAARLPREL
Trigger: CAGCTCCCGGGGGAGGCGGGCAGCGGCATCTGAGCAGAGCAGGGCACTCCAGGCCAGGCAGAAGGTGGGTAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS TCA 72 bp GTGGCAGAGGGGCCACGCTCAACCCGCGGGGCTTGGTaGCCAGAAAGCTGTGCAGGCTCCCTCTTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: VAEGPRSTRGAW*PESCAGSLFLP
Trigger: CGGGAGGAAGAGGGAGCCTGCACAGCTTTCTGGTCACCAAGCCCCGCGGGTTGAGCGTGGCCCCTCTGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507915.1
CDS GCA 72 bp GGCCGGGTGTTGGTCAGGGCTTCCCAGACGGTCACCTaGAGCCACCAGAGCCCACAGCTGTCACTTCTGCCG +
Preference number: 6 (lower is better)
Translates to: GRVLVRASQTVT*SHQSPQLSLLP
Trigger: CGGCAGAAGTGACAGCTGTGGGCTCTGGTGGCTGCAGGTGACCGTCTGGGAAGCCCTGACCAACACCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507915.1
CDS CAA 72 bp GCAGGTGGCAGAGGGGCCACGCTCAACCCGCGGGGCTaGGTGACCAGAAAGCTGTGCAGGCTCCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: AGGRGATLNPRG*VTRKLCRLPLP
Trigger: AGGAAGAGGGAGCCTGCACAGCTTTCTGGTCACCAAGCCCCGCGGGTTGAGCGTGGCCCCTCTGCCACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507915.1
CDS GCA 72 bp GGGGCTGGGCACTCAGGCCCGCTGAGTTCCCACAAATaGTCAGGGTTTCCAGAGCCCAGGGGCTACTCTGGG +
Preference number: 6 (lower is better)
Translates to: GAGHSGPLSSHK*SGFPEPRGYSG
Trigger: CCCAGAGTAGCCCCTGGGCTCTGGAAACCCTGAGCATTTGTGGGAACTCAGCGGGCCTGAGTGCCCAGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506531.5
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS CCA 72 bp GTCCGCCCGCGGGGGTCCTCCTGTTCAATGTCGTGCTaGGGGAGACGGGACACTCACAAAGGGCAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: VRPRGSSCSMSC*GRRDTHKGQER
Trigger: TCTCTCCTGCCCTTTGTGAGTGTCCCGTCTCCCCCAGCACGACATTGAACAGGAGGACCCCCGCGGGCGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514779.2
CDS TCA 72 bp TGCCTTGAACCTGCCCAGCCGACCACAGGACATGGGTaGGGCACGGCTGGTGGCCCTTCCATTGAGGACTGC +
Preference number: 6 (lower is better)
Translates to: CLEPAQPTTGHG*GTAGGPSIEDC
Trigger: GCAGTCCTCAATGGAAGGGCCACCAGCCGTGCCTCACCCATGTCCTGTGGTCGGCTGGGCAGGTTCAAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS GCA 72 bp CCTCTGGTTCGTGGGCAGCTGCCTTTACCCACCTTCTaGCTGGCCTGGAGTGCCCTGCTCTGCTCAGATGCC +
Preference number: 6 (lower is better)
Translates to: PLVRGQLPLPTF*LAWSALLCSDA
Trigger: GGCATCTGAGCAGAGCAGGGCACTCCAGGCCAGGCAGAAGGTGGGTAAAGGCAGCTGCCCACGAACCAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS CCA 72 bp CCAGCACGCTGTACCCGTTGGGCACTTCAAACACGGTaGGGTCCACCTCGCACGGGAAAGGGTTCCCTAGGC +
Preference number: 6 (lower is better)
Translates to: PARCTRWALQTR*GPPRTGKGSLG
Trigger: GCCTAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGGGTACAGCGTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507915.1
CDS CAA 72 bp CAGGACATGGGTGAGGCACGGCTGGTGGCCCTTCCATaGAGGACTGCCCTCTGGTTCGTGGGCAGCTGCCTT +
Preference number: 6 (lower is better)
Translates to: QDMGEARLVALP*RTALWFVGSCL
Trigger: AAGGCAGCTGCCCACGAACCAGAGGGCAGTCCTCAATGGAAGGGCCACCAGCCGTGCCTCACCCATGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS CAA 90 bp AGCCGACCACAGGACATGGGTGAGGCACGGCTGGTGGCCCTTCCATaGAGGACTGCCCTCTGGTTCGTGGGCAGCTGCCTTTACCCACCT +
Preference number: 6 (lower is better)
Translates to: SRPQDMGEARLVALP*RTALWFVGSCLYPP
Trigger: AGGTGGGTAAAGGCAGCTGCCCACGAACCAGAGGGCAGTCCTCAATGGAAGGGCCACCAGCCGTGCCTCACCCATGTCCTGTGGTCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS CAA 90 bp TCACCCAGGGAGAGCGGGTGCTCTTCACTCAGCCACAGTGTTGCCTaGAACCTGCCCAGCCGACCACAGGACATGGGTGAGGCACGGCTG +
Preference number: 6 (lower is better)
Translates to: SPRESGCSSLSHSVA*NLPSRPQDMGEARL
Trigger: CAGCCGTGCCTCACCCATGTCCTGTGGTCGGCTGGGCAGGTTCAAGGCAACACTGTGGCTGAGTGAAGAGCACCCGCTCTCCCTGGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS TCA 72 bp CTGTGTACTCCGCAGGGGCTGGGCACTCAGGCCCGCTaGGTTCCCACAAATGCTCAGGGTTTCCAGAGCCCA +
Preference number: 6 (lower is better)
Translates to: LCTPQGLGTQAR*VPTNAQGFQSP
Trigger: TGGGCTCTGGAAACCCTGAGCATTTGTGGGAACTCAGCGGGCCTGAGTGCCCAGCCCCTGCGGAGTACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506531.5
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS TCA 72 bp AGGACATGGGTGAGGCACGGCTGGTGGCCCTTCCATTaGGGACTGCCCTCTGGTTCGTGGGCAGCTGCCTTT +
Preference number: 6 (lower is better)
Translates to: RTWVRHGWWPFH*GLPSGSWAAAF
Trigger: AAAGGCAGCTGCCCACGAACCAGAGGGCAGTCCTCAATGGAAGGGCCACCAGCCGTGCCTCACCCATGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS TCA 72 bp GGTTGGGAATCGCTGTGGGAAATAAGGACGGCGGACTaGCCAGGGAGATGGCAGAGGGTGGCCTGCGTGTCC +
Preference number: 6 (lower is better)
Translates to: GWESLWEIRTAD*PGRWQRVACVS
Trigger: GGACACGCAGGCCACCCTCTGCCATCTCCCTGGTCAGTCCGCCGTCCTTATTTCCCACAGCGATTCCCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514779.2
CDS GCA 72 bp CTTCCATTGAGGACTGCCCTCTGGTTCGTGGGCAGCTaGCTTTACCCACCTTCTGCCTGGCCTGGAGTGCCC +
Preference number: 6 (lower is better)
Translates to: LPLRTALWFVGS*LYPPSAWPGVP
Trigger: GGGCACTCCAGGCCAGGCAGAAGGTGGGTAAAGGCAGCTGCCCACGAACCAGAGGGCAGTCCTCAATGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS CAA 90 bp TCATCTCAACGTAGAAATCGGGGGCCTAAGAGAAACCAGAGCTGCTaGTCAGCGCCCTGCCTGCTGCTGGCTCCAGCAGGCCTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: SSQRRNRGPKRNQSC*SAPCLLLAPAGLGA
Trigger: GGCTCCCAGGCCTGCTGGAGCCAGCAGCAGGCAGGGCGCTGACAAGCAGCTCTGGTTTCTCTTAGGCCCCCGATTTCTACGTTGAGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512101.5
CDS CAA 90 bp TACCCCACCTCCATAACTGTGCCCTGCTGTACCTGGCGAAGTTTGTaGAGCAGTTCCGGAATGCCCGCCAGCCTCTGCGTGGCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: YPTSITVPCCTWRSL*SSSGMPASLCVALW
Trigger: CCAGAGGGCCACGCAGAGGCTGGCGGGCATTCCGGAACTGCTCAACAAACTTCGCCAGGTACAGCAGGGCACAGTTATGGAGGTGGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513460.5
CDS CAA 90 bp TGGTACCCCACCTCCATAACTGTGCCCTGCTGTACCTGGCGAAGTTaGTTGAGCAGTTCCGGAATGCCCGCCAGCCTCTGCGTGGCCCTC +
Preference number: 6 (lower is better)
Translates to: WYPTSITVPCCTWRS*LSSSGMPASLCVAL
Trigger: GAGGGCCACGCAGAGGCTGGCGGGCATTCCGGAACTGCTCAACAAACTTCGCCAGGTACAGCAGGGCACAGTTATGGAGGTGGGGTACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513460.5
CDS TCA 72 bp AGAGCGGGTGCTCTTCACTCAGCCACAGTGTTGCCTTaGACCTGCCCAGCCGACCACAGGACATGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: RAGALHSATVLP*TCPADHRTWVR
Trigger: CCTCACCCATGTCCTGTGGTCGGCTGGGCAGGTTCAAGGCAACACTGTGGCTGAGTGAAGAGCACCCGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS CCA 72 bp GCTCTCACCCCGCTTCCACACGCGGTACACATCGCTTaGGCACATCTTAGACACAAGGGGCACTGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: ALTPLPHAVHIA*AHLRHKGHCRV
Trigger: CACCCTGCAGTGCCCCTTGTGTCTAAGATGTGCCCAAGCGATGTGTACCGCGTGTGGAAGCGGGGTGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504729.1
CDS CAA 72 bp GAGAGCGGGTGCTCTTCACTCAGCCACAGTGTTGCCTaGAACCTGCCCAGCCGACCACAGGACATGGGTGAG +
Preference number: 6 (lower is better)
Translates to: ESGCSSLSHSVA*NLPSRPQDMGE
Trigger: CTCACCCATGTCCTGTGGTCGGCTGGGCAGGTTCAAGGCAACACTGTGGCTGAGTGAAGAGCACCCGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504236.2
CDS CAA 90 bp AGCCCCTTGTCCTCTGCAGTACCTGCCCAGCCCTGGCGGTTCTCTTaGCCCACGTTGGCATTGTGTCGAAGGAGCACTCTCACAGACTCC +
Preference number: 6 (lower is better)
Translates to: SPLSSAVPAQPWRFS*PTLALCRRSTLTDS
Trigger: GGAGTCTGTGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGGTACTGCAGAGGACAAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447274.7
CDS GCA 72 bp CCTCTGCAGTACCTGCCCAGCCCTGGCGGTTCTCTTTaGCCACGTTGGCATTGTGTCGAAGGAGCACTCTCA +
Preference number: 6 (lower is better)
Translates to: PLQYLPSPGGSL*PRWHCVEGALS
Trigger: TGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGGTACTGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447274.7
CDS GCA 72 bp CAACGTAGAAATCGGGGGCCTAAGAGAAACCAGAGCTaGTTGTCAGCGCCCTGCCTGCTGCTGGCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: QRRNRGPKRNQS*LSAPCLLLAPA
Trigger: TGCTGGAGCCAGCAGCAGGCAGGGCGCTGACAAGCAGCTCTGGTTTCTCTTAGGCCCCCGATTTCTACGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512101.5
CDS CCA 72 bp GCTCAGGGTTTCCAGAGCCCAGGGGCTACTCTGGGATaGATGTGGAGAGGAGCTGAGTTCCTGGACCTCATC +
Preference number: 6 (lower is better)
Translates to: AQGFQSPGATLG*MWRGAEFLDLI
Trigger: GATGAGGTCCAGGAACTCAGCTCCTCTCCACATCCATCCCAGAGTAGCCCCTGGGCTCTGGAAACCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506531.5
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS CCA 72 bp GCCTGTGCAGAGCCCTGGGGGAGCCTTTGTTTCCACTaGGTCTCAGAGTCCTACTCTGTAAAGGGGGCACAG +
Preference number: 6 (lower is better)
Translates to: ACAEPWGSLCFH*VSESYSVKGAQ
Trigger: CTGTGCCCCCTTTACAGAGTAGGACTCTGAGACCCAGTGGAAACAAAGGCTCCCCCAGGGCTCTGCACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512101.5
CDS CAA 72 bp GTACCTGCCCAGCCCTGGCGGTTCTCTTTGCCCACGTaGGCATTGTGTCGAAGGAGCACTCTCACAGACTCC +
Preference number: 6 (lower is better)
Translates to: VPAQPWRFSLPT*ALCRRSTLTDS
Trigger: GGAGTCTGTGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447274.7
CDS CAA 72 bp TCCTCTGCAGTACCTGCCCAGCCCTGGCGGTTCTCTTaGCCCACGTTGGCATTGTGTCGAAGGAGCACTCTC +
Preference number: 6 (lower is better)
Translates to: SSAVPAQPWRFS*PTLALCRRSTL
Trigger: GAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGGTACTGCAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447274.7
CDS CAA 90 bp TCCTCTGCAGTACCTGCCCAGCCCTGGCGGTTCTCTTTGCCCACGTaGGCATTGTGTCGAAGGAGCACTCTCACAGACTCCAGGTTTCCC +
Preference number: 6 (lower is better)
Translates to: SSAVPAQPWRFSLPT*ALCRRSTLTDSRFP
Trigger: GGGAAACCTGGAGTCTGTGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAACCGCCAGGGCTGGGCAGGTACTGCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447274.7
CDS CAA 90 bp AACGAGGAGATGCAGCCCCAGGGTCAAGAGGAACACACTCCTCTTTaGATCTCGGTACCCTGGGTAGGGGCCCATGATGTGGGTGAGCCC +
Preference number: 6 (lower is better)
Translates to: NEEMQPQGQEEHTPL*ISVPWVGAHDVGEP
Trigger: GGGCTCACCCACATCATGGGCCCCTACCCAGGGTACCGAGATCAAAAGAGGAGTGTGTTCCTCTTGACCCTGGGGCTGCATCTCCTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506531.5
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS GCA 72 bp CTGCCAGCCAGGCCCCTCCGTGTGCTTCCAGAAGGGTaGGTAGTAGCAAGTATTCCAGGGTTTCAGGCCATA +
Preference number: 6 (lower is better)
Translates to: LPARPLRVLPEG*VVASIPGFQAI
Trigger: TATGGCCTGAAACCCTGGAATACTTGCTACTACGCACCCTTCTGGAAGCACACGGAGGGGCCTGGCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512101.5
CDS GCA 72 bp GCCCTGCCATGGTACCCCACCTCCATAACTGTGCCCTaGTGTACCTGGCGAAGTTTGTTGAGCAGTTCCGGA +
Preference number: 6 (lower is better)
Translates to: ALPWYPTSITVP*CTWRSLLSSSG
Trigger: TCCGGAACTGCTCAACAAACTTCGCCAGGTACAGCAGGGCACAGTTATGGAGGTGGGGTACCATGGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513460.5
CDS CCA 72 bp CTACAGTGGTCTTCAGACAATGAGGCTGTAAGCACCTaGAGGTGGAGGGCCAGCCTCAACCTGGCCATGAGC +
Preference number: 6 (lower is better)
Translates to: LQWSSDNEAVST*RWRASLNLAMS
Trigger: GCTCATGGCCAGGTTGAGGCTGGCCCTCCACCTCCAGGTGCTTACAGCCTCATTGTCTGAAGACCACTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512101.5
CDS CAA 72 bp TCCATAACTGTGCCCTGCTGTACCTGGCGAAGTTTGTaGAGCAGTTCCGGAATGCCCGCCAGCCTCTGCGTG +
Preference number: 6 (lower is better)
Translates to: SITVPCCTWRSL*SSSGMPASLCV
Trigger: CACGCAGAGGCTGGCGGGCATTCCGGAACTGCTCAACAAACTTCGCCAGGTACAGCAGGGCACAGTTATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513460.5
CDS CAA 72 bp ACCTCCATAACTGTGCCCTGCTGTACCTGGCGAAGTTaGTTGAGCAGTTCCGGAATGCCCGCCAGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: TSITVPCCTWRS*LSSSGMPASLC
Trigger: GCAGAGGCTGGCGGGCATTCCGGAACTGCTCAACAAACTTCGCCAGGTACAGCAGGGCACAGTTATGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513460.5
CDS GCA 72 bp CAGGGTCTGAACCCCAGGAAGTCACCAACGAGGAGATaGAGCCCCAGGGTCAAGAGGAACACACTCCTCTTT +
Preference number: 6 (lower is better)
Translates to: QGLNPRKSPTRR*SPRVKRNTLLF
Trigger: AAAGAGGAGTGTGTTCCTCTTGACCCTGGGGCTGCATCTCCTCGTTGGTGACTTCCTGGGGTTCAGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506531.5
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS GCA 72 bp ACCCAGGTCCTCCTGTCCCAGAGACAGATGAGATCTTaGTCCCCAAAATGGAGGAGGTGGCAGGGTCTGAAC +
Preference number: 6 (lower is better)
Translates to: TQVLLSQRQMRS*SPKWRRWQGLN
Trigger: GTTCAGACCCTGCCACCTCCTCCATTTTGGGGAGCAAGATCTCATCTGTCTCTGGGACAGGAGGACCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506531.5
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS CAA 72 bp ATGCAGCCCCAGGGTCAAGAGGAACACACTCCTCTTTaGATCTCGGTACCCTGGGTAGGGGCCCATGATGTG +
Preference number: 6 (lower is better)
Translates to: MQPQGQEEHTPL*ISVPWVGAHDV
Trigger: CACATCATGGGCCCCTACCCAGGGTACCGAGATCAAAAGAGGAGTGTGTTCCTCTTGACCCTGGGGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506531.5
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS CAA 72 bp CTGGCCATGAGCCTGTGCAGAGCCCTGGGGGAGCCTTaGTTTCCACTGGGTCTCAGAGTCCTACTCTGTAAA +
Preference number: 6 (lower is better)
Translates to: LAMSLCRALGEP*FPLGLRVLLCK
Trigger: TTTACAGAGTAGGACTCTGAGACCCAGTGGAAACAAAGGCTCCCCCAGGGCTCTGCACAGGCTCATGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512101.5
CDS TCA 72 bp TCAAAGCTGGGTTTACCTTTGCTCCTCGACTTGTCCTaGTCAGAGAGGTGCTCCGTGCGTGTGCGTGTCACC +
Preference number: 6 (lower is better)
Translates to: SKLGLPLLLDLS*SERCSVRVRVT
Trigger: GGTGACACGCACACGCACGGAGCACCTCTCTGATCAGGACAAGTCGAGGAGCAAAGGTAAACCCAGCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508417.5
ENST00000508422.1
CDS CAA 90 bp CTAACAGTTTCCATCTTCTCAGACCGCCAGCCCCAGATACCACATTaGTTCCTGAAACAGACCAAACAGGAGCTGGTGAGACCTGCACCC +
Preference number: 6 (lower is better)
Translates to: LTVSIFSDRQPQIPH*FLKQTKQELVRPAP
Trigger: GGGTGCAGGTCTCACCAGCTCCTGTTTGGTCTGTTTCAGGAACAAATGTGGTATCTGGGGCTGGCGGTCTGAGAAGATGGAAACTGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6
CDS TCA 72 bp GGGACACTTGAGCATGGACTTGGGACTAGAAGACACTaGGGAATTAGCATGAATCTTGTGAGGTATGATAGT +
Preference number: 6 (lower is better)
Translates to: GTLEHGLGTRRH*GISMNLVRYDS
Trigger: ACTATCATACCTCACAAGATTCATGCTAATTCCTCAGTGTCTTCTAGTCCCAAGTCCATGCTCAAGTGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508417.5
ENST00000512231.5
ENST00000513750.6