RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD12 (Homo sapiens)

Ensembl gene IDs: ENSG00000101745

Ensembl transcript IDs: ENST00000262126.9, ENST00000359158.7, ENST00000400020.7, ENST00000540578.6, ENST00000546007.6, ENST00000577992.1, ENST00000581635.5, ENST00000581758.1, ENST00000585234.5

Found 470 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTACAAATTGAAGGTTTGTGGCAACCCTGCTTCAAGCAAGTCTATTaGTGCTCTTTTTCCAACAGCATGTGCTCACTTTGTTACCATTTT +
Preference number: 1 (lower is better)
Translates to: LQIEGLWQPCFKQVY*CSFSNSMCSLCYHF
Trigger: AAAATGGTAACAAAGTGAGCACATGCTGTTGGAAAAAGAGCACCAATAGACTTGCTTGAAGCAGGGTTGCCACAAACCTTCAATTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262126.9
3UTR GCA 90 bp CCTTTCTGTTTGTGTTCACCTGAAACTACATATTCCTTTTTGGTTTaGATATCAGAATTTGATGTTTCAGGGATGACGGAACATGAAGTA +
Preference number: 1 (lower is better)
Translates to: PFCLCSPETTYSFLV*ISEFDVSGMTEHEV
Trigger: TACTTCATGTTCCGTCATCCCTGAAACATCAAATTCTGATATGCAAACCAAAAAGGAATATGTAGTTTCAGGTGAACACAAACAGAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCTTCAACAGAACCAGTaGTTCGAAATCTACCCTGCC +
Preference number: 2 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVLQQNQ*FEIYPA
Trigger: GGCAGGGTAGATTTCGAAGCACTGGTTCTGTTGAAG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAACCAGTCTGCCAACATaGTCTAATGCAATAGTTACC +
Preference number: 2 (lower is better)
Translates to: VTGLLEETSMKCLTLLQATSLPT*SNAIVT
Trigger: GGTAACTATTGCATTAGAGCATGTTGGCAGACTGGT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR-3UTR CCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGAAAGCCTGTTCTGTTTaGGCCAACAGTGCTATTTCC +
Preference number: 2 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVKACSV*ANSAIS
Trigger: GGAAATAGCACTGTTGGCCCAAACAGAACAGGCTTT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAAAATACCTACCAGTCTaGCAACATGCTCTAATGCAA +
Preference number: 2 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAKYLPV*QHALMQ
Trigger: TTGCATTAGAGCATGTTGGCAGACTGGTAGGTATTT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR-3UTR TCA 90 bp CTCTTTCCAAAATTCTCTATCAAATTCCACACTCCTCTGCAGTTCTTTGGCACTTTCCTTGAGGGACTTTaGCCAAGCAATAATTCAGGC +
Preference number: 2 (lower is better)
Translates to: LFPKFSIKFHTPLQFFGTFLEGL*PSNNSG
Trigger: GCCTGAATTATTGCTTGGTCAAAGTCCCTCAAGGAA...AGTGCCAAAGAACTGCAGAGGAGTGTGGAATTTGATAGAGAATTTTGGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGAATGCCTTACACTACTaGAGGCATCAATTATGGAGA +
Preference number: 2 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVNALHY*RHQLWR
Trigger: TCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR-3UTR GCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACGAGACTAGTATGAAATaGCTTACACTACTGCAGGCA +
Preference number: 2 (lower is better)
Translates to: FSPISWNYQLALDHFIPHETSMK*LTLLQA
Trigger: TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTC...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR-3UTR GCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGTGTTTGGGCCAACAGTaGTATTTCCCAGACCTCTGG +
Preference number: 2 (lower is better)
Translates to: NNCLIVKSHSNELHGVFECLGQQ*YFPDLW
Trigger: CCAGAGGTCTGGGAAATAGCACTGTTGGCCCAAACA...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
3UTR-3UTR CCA 90 bp TGGATAACCAAAAAGAATGCTAACTGGTGTGGATTTCTTATTTCCAGCTTCCTTAAGAAGTCTAATTACTaGGCCAGTGCTCGTAGGGGG +
Preference number: 2 (lower is better)
Translates to: WITKKNANWCGFLISSFLKKSNY*ASARRG
Trigger: CCCCCTACGAGCACTGGCCCAGTAATTAGACTTCTT...AAGGAAGCTGGAAATAAGAAATCCACACCAGTTAGCATTCTTTTTGGTTATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581635.5
3UTR-3UTR CCA 90 bp CTCTTTCCAAAATTCTCTATCAAATTCCACACTCCTCTGCAGTTCTTTGGCACTAGTTCCCCTCCTCTCTaGTCTTTTCTGAACAATCTA +
Preference number: 2 (lower is better)
Translates to: LFPKFSIKFHTPLQFFGTSSPPL*SFLNNL
Trigger: TAGATTGTTCAGAAAAGACCAGAGAGGAGGGGAACT...AGTGCCAAAGAACTGCAGAGGAGTGTGGAATTTGATAGAGAATTTTGGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR TCA 90 bp AGAGGTGTTTTACTGGGAAGTATCTGTTTACTTTCACAGATGAGAGAGTCTTTCGAAGGATTTACAGATTaGGCCTCTTCGGAATTGATG +
Preference number: 2 (lower is better)
Translates to: RGVLLGSICLLSQMRESFEGFTD*ASSELM
Trigger: CATCAATTCCGAAGAGGCTCAATCTGTAAATCCTTC...GAAAGACTCTCTCATCTGTGAAAGTAAACAGATACTTCCCAGTAAAACACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR TCA 90 bp CTCTTTCCAAAATTCTCTATCAAATTCCACACTCCTCTGCAGTTCTTTGGCACTTTGCATATCAGAATTTaGTGTTTCAGGGATGACGGA +
Preference number: 2 (lower is better)
Translates to: LFPKFSIKFHTPLQFFGTLHIRI*CFRDDG
Trigger: TCCGTCATCCCTGAAACATCAAATTCTGATATGCAA...AGTGCCAAAGAACTGCAGAGGAGTGTGGAATTTGATAGAGAATTTTGGAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR GCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAACCAGTCTGCCAACATaGTCTAATGCAATAGTTACC +
Preference number: 2 (lower is better)
Translates to: PYTTAGINYGELNYRKHATSLPT*SNAIVT
Trigger: GGTAACTATTGCATTAGAGCATGTTGGCAGACTGGT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR-3UTR GCA 90 bp CTTTTCTGGACCTTCTTTCTAAAGAAGTCTAATTACTGGGCCAGTGCTCGTAGGTTCAACAGTAAACACTaGCATGATTTACCTCTGTTA +
Preference number: 2 (lower is better)
Translates to: LFWTFFLKKSNYWASARRFNSKH*HDLPLL
Trigger: TAACAGAGGTAAATCATGGCAGTGTTTACTGTTGAA...CCTACGAGCACTGGCCCAGTAATTAGACTTCTTTAGAAAGAAGGTCCAGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581635.5
3UTR-3UTR CCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGAAAGCCTGTTCTGTTTaGGCCAACAGTGCTATTTCC +
Preference number: 2 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEKACSV*ANSAIS
Trigger: GGAAATAGCACTGTTGGCCCAAACAGAACAGGCTTT...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
3UTR-3UTR TCA 90 bp AGAGGTGTTTTACTGGGAAGTATCTGTTTACTTTCACAGATGAGAGAGTCTTTCTTTTGTATCATTCCTTaGGGGACTTTGACCAAGCAA +
Preference number: 2 (lower is better)
Translates to: RGVLLGSICLLSQMRESFFCIIP*GTLTKQ
Trigger: TTGCTTGGTCAAAGTCCCTCAAGGAATGATACAAAA...GAAAGACTCTCTCATCTGTGAAAGTAAACAGATACTTCCCAGTAAAACACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR GCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAAAATACCTACCAGTCTaGCAACATGCTCTAATGCAA +
Preference number: 2 (lower is better)
Translates to: PYTTAGINYGELNYRKHAKYLPV*QHALMQ
Trigger: TTGCATTAGAGCATGTTGGCAGACTGGTAGGTATTT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR CAA 90 bp ACTTTGCCTTTCTGTTTGTGTTCACCTGAAACTACATATTCCTTTTaGGTTTGCATATCAGAATTTGATGTTTCAGGGATGACGGAACAT +
Preference number: 2 (lower is better)
Translates to: TLPFCLCSPETTYSF*VCISEFDVSGMTEH
Trigger: ATGTTCCGTCATCCCTGAAACATCAAATTCTGATATGCAAACCAAAAAGGAATATGTAGTTTCAGGTGAACACAAACAGAAAGGCAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR TCA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTGTTTACTTTCACAGATaGGAGAGTCTTTCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVVYFHR*ESLSLF
Trigger: AAACAGAGAAAGACTCTCTCATCTGTGAAAGTAAAC...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR GCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTCTGGAATTACCAACTTaGACTAGATCACTTCATTCC +
Preference number: 2 (lower is better)
Translates to: FVACLIQAILFYCALLYCLELPT*TRSLHS
Trigger: GGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAG...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
3UTR-3UTR CCA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTATCCACAAGAATGTTTaGGAGATTTACCAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVIHKNV*EIYQWK
Trigger: TTTCCACTGGTAAATCTCCCAAACATTCTTGTGGAT...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR CAA 90 bp CTCATTACTGTTAGGTGCAACATGGATGAATTTCAAAACATCATGTaGAGAAACAAGGCAGACAAGGAAGTATGTATGACTCTATTTCTA +
Preference number: 2 (lower is better)
Translates to: LITVRCNMDEFQNIM*RNKADKEVCMTLFL
Trigger: TAGAAATAGAGTCATACATACTTCCTTGTCTGCCTTGTTTCTCAACATGATGTTTTGAAATTCATCCATGTTGCACCTAACAGTAATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
3UTR CAA 90 bp TGCCTATCATCAATCATCTTATTAATTTCTTCATCATCATCATCTTaGAACTCATACTCATCAAGGGCAGATGGAAGAGGTGTTTTACTG +
Preference number: 2 (lower is better)
Translates to: CLSSIILLISSSSSS*NSYSSRADGRGVLL
Trigger: CAGTAAAACACCTCTTCCATCTGCCCTTGATGAGTATGAGTTCAAAGATGATGATGATGAAGAAATTAATAAGATGATTGATGATAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR CCA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTGAAGAGGTGTTTTACTaGGAAGTATCTGTTTACTTT +
Preference number: 2 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVEEVFY*EVSVYF
Trigger: AAAGTAAACAGATACTTCCCAGTAAAACACCTCTTC...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR CCA 72 bp CTTTTCTGGACCTTCTTTCTAAAGAAGTCTAATTACTaGGCCAGTGCTCGTAGGGGGCTTAGGGTCAACACT +
Preference number: 3 (lower is better)
Translates to: LFWTFFLKKSNY*ASARRGLRVNT
Trigger: AGTGTTGACCCTAAGCCCCCTACGAGCACTGGCCCAGTAATTAGACTTCTTTAGAAAGAAGGTCCAGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581635.5
3UTR TCA 72 bp GTTTGGGCCAACAGTGCTATTTCCCAGACCTCTGGTTaGACCATCAGAACAAAATGCCCTATAAACTTACCC +
Preference number: 3 (lower is better)
Translates to: VWANSAISQTSG*TIRTKCPINLP
Trigger: GGGTAAGTTTATAGGGCATTTTGTTCTGATGGTTCAACCAGAGGTCTGGGAAATAGCACTGTTGGCCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR-3UTR CAA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTTCCCAGACCTCTGGTaGAACCATCAGAACAAAATG +
Preference number: 3 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVFPDLW*NHQNKM
Trigger: CATTTTGTTCTGATGGTTCAACCAGAGGTCTGGGAA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR GCA 72 bp TTATCTTCTAAAAGCCTGTTCTGTTTGGGCCAACAGTaGTATTTCCCAGACCTCTGGTTGAACCATCAGAAC +
Preference number: 3 (lower is better)
Translates to: LSSKSLFCLGQQ*YFPDLWLNHQN
Trigger: GTTCTGATGGTTCAACCAGAGGTCTGGGAAATAGCACTGTTGGCCCAAACAGAACAGGCTTTTAGAAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR TCA 72 bp AGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTaGGAACTGTGGTTAAGACTAAAAAGCTGGGATGAC +
Preference number: 3 (lower is better)
Translates to: RGSSFLRYHLRE*ELWLRLKSWDD
Trigger: GTCATCCCAGCTTTTTAGTCTTAACCACAGTTCTCACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR-3UTR CAA 90 bp TCATCATCATCATCTTTGAACTCATACTCATCAAGGGCAGATGGAAGAGGTGTTAGAAGGATTTACAGATaGAGCCTCTTCGGAATTGAT +
Preference number: 3 (lower is better)
Translates to: SSSSSLNSYSSRADGRGVRRIYR*SLFGID
Trigger: ATCAATTCCGAAGAGGCTCAATCTGTAAATCCTTCT...AACACCTCTTCCATCTGCCCTTGATGAGTATGAGTTCAAAGATGATGATGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR CAA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTCTCCTCTGCAGTTCTTaGGCACTATCCTTAGTTTTG +
Preference number: 3 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVLLCSS*ALSLVL
Trigger: CAAAACTAAGGATAGTGCCAAAGAACTGCAGAGGAG...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR TCA 72 bp TGCTTTACTGAGATGGTCTGGAACCTAAAGTACGTCTaGGGTATGCCTGTACTTAAAAATTCACTTGTGAGA +
Preference number: 3 (lower is better)
Translates to: CFTEMVWNLKYV*GMPVLKNSLVR
Trigger: TCTCACAAGTGAATTTTTAAGTACAGGCATACCTCAGACGTACTTTAGGTTCCAGACCATCTCAGTAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262126.9
3UTR-3UTR CAA 90 bp AGAGGTGTTTTACTGGGAAGTATCTGTTTACTTTCACAGATGAGAGAGTCTTTCTTTTTGTATCATTCCTaGAGGGACTTTGACCAAGCA +
Preference number: 3 (lower is better)
Translates to: RGVLLGSICLLSQMRESFFLYHS*RDFDQA
Trigger: TGCTTGGTCAAAGTCCCTCAAGGAATGATACAAAAA...GAAAGACTCTCTCATCTGTGAAAGTAAACAGATACTTCCCAGTAAAACACCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR CAA 90 bp CTCTTTCCAAAATTCTCTATCAAATTCCACACTCCTCTGCAGTTCTTTGGCACTTCATCATCATCATCTTaGAACTCATACTCATCAAGG +
Preference number: 3 (lower is better)
Translates to: LFPKFSIKFHTPLQFFGTSSSSS*NSYSSR
Trigger: CCTTGATGAGTATGAGTTCAAAGATGATGATGATGA...AGTGCCAAAGAACTGCAGAGGAGTGTGGAATTTGATAGAGAATTTTGGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359158.7
3UTR-3UTR CAA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTTTACAAATTGAAGGTTaGTGGCAACCCTGCTTCAAG +
Preference number: 3 (lower is better)
Translates to: FVACLIQAILFYCALLYCLQIEG*WQPCFK
Trigger: CTTGAAGCAGGGTTGCCACAAACCTTCAATTTGTAA...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
3UTR-3UTR CAA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGCAGCATGTGCTCACTTaGTTACCATTTTTAGCAATA +
Preference number: 3 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEQHVLT*LPFLAI
Trigger: TATTGCTAAAAATGGTAACAAAGTGAGCACATGCTG...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262126.9
3UTR-3UTR CAA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTTCACCAGATTCCTTCTaGTCGCTTTTATCTTCTAAA +
Preference number: 3 (lower is better)
Translates to: FVACLIQAILFYCALLYCSPDSF*SLLSSK
Trigger: TTTAGAAGATAAAAGCGACAAGAAGGAATCTGGTGA...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCGCCGGAGCCGGGCTTaGAAACATCTCCGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVRRSRA*KHLRSR
Trigger: CCGAGACCGGAGATGTTTTCAAGCCCGGCTCCGGCG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGACGATCTCGGCTCACTaGAAGCTCCGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVTISAH*KLRLPG
Trigger: GCCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTTGCCCAGGCTGGGGTaGAGTGGCGTGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVLPRLG*SGVSSL
Trigger: CAGTGAGCTCACGCCACTGCACCCCAGCCTGGGCAA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCTCACGCCATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVLTPFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAAAGGATGCCGGATCCTaGGCACAAGAGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAKDAGS*AQEFPG
Trigger: GCCAGGAAACTCTTGTGCTCAGGATCCGGCATCCTT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGTGCTCCAGGGGTCTTaGAGCATCACAAGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAVLQGS*SITSGY
Trigger: GTACCCACTTGTGATGCTTCAAGACCCCTGGAGCAC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAAGGCTGAGGTACACGTaGCACTTTCCTTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQARLRYT*HFPFPW
Trigger: CCACGGAAAAGGAAAGTGTCACGTGTACCTCAGCCT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCACTCACTTGCACAGGCTaGGGTACACGTGACACTTTC +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQALTCTG*GTRDTF
Trigger: GAAAGTGTCACGTGTACCTCAGCCTGTGCAAGTGAG...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGACAGAACTGTAGAGTaGCTGCTCTTTCCCCGGACA +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQADRTVE*LLFPRT
Trigger: TGTCCGGGGAAAGAGCAGCCACTCTACAGTTCTGTC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACAAGGATGCCGGATCCTaGGCACAAGAGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHKDAGS*AQEFPG
Trigger: GCCAGGAAACTCTTGTGCTCAGGATCCGGCATCCTT...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTGGGGTGCAGTGGCGTaGGCTCACTGCAACCTCCGC +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNWGAVA*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCTCACGCCACTGCACCCCA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAAGAGTCATACTCAACTaGAGGCCTTGGGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQARVILN*RPWGCH
Trigger: GTGACAACCCCAAGGCCTCCAGTTGAGTATGACTCT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGGGCAGGCGTTGTTTGTaGTGGATGATTTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVGRRCL*WMIWCG
Trigger: TCCACACCAAATCATCCATCACAAACAACGCCTGCC...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCAACTCCTCTGTTTCTaGTACATCCACTGGACGCTC +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVQLLCF*YIHWTL
Trigger: GAGCGTCCAGTGGATGTAGCAGAAACAGAGGAGTTG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATCCTGGAGTTTGAGCTaGCATTCTAACCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASWSLS*HSNLWT
Trigger: TGTCCAGAGGTTAGAATGGCAGCTCAAACTCCAGGA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCTCAACTGGAGGCCTTaGGGTTGTCACTGTAGTATG +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVLNWRP*GCHCSM
Trigger: CATACTACAGTGACAACCCCAAGGCCTCCAGTTGAG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGCAGGATCAAGTTCCTaGAGTTTGAGCTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAAGSSS*SLSCHS
Trigger: AGAATGGCAGCTCAAACTCCAGGAACTTGATCCTGC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCCACTGCGCCTGGCCTaGCCTATTTTCTTTTATGAG +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVPLRLA*PIFFYE
Trigger: CTCATAAAAGAAAATAGGCCAGGCCAGGCGCAGTGG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTCAGGCTGGGGTGCAGTaGCGTGAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCQAGVQ*RELTAT
Trigger: GGTTGCAGTGAGCTCACGCCACTGCACCCCAGCCTG...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGAAGGATTTACAGATTaGGCCTCTTCGGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAEGFTD*ASSESV
Trigger: CACAGATTCCGAAGAGGCTCAATCTGTAAATCCTTC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATCCAATTCCCTTTCATaGAGAGCAGGAGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASNSLS*RAGDLA
Trigger: TGCCAAATCTCCTGCTCTTCATGAAAGGGAATTGGA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCAAGTTCCTGGAGTTTaGGCTGCCATTCTAACCTCT +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVQVPGV*AAILTS
Trigger: AGAGGTTAGAATGGCAGCTCAAACTCCAGGAACTTG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACGAGATCTAAGAACCTaGCGTGCTCCAGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHARDLRT*RAPGVL
Trigger: CAAGACCCCTGGAGCACGTCAGGTTCTTAGATCTCG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS-3UTR GCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACCAACTCCTCTGTTTCTaGTACATCCACTGGACGCTC +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHQLLCF*YIHWTL
Trigger: GAGCGTCCAGTGGATGTAGCAGAAACAGAGGAGTTG...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAAATTCCACACTCCTCTaGAGTTCTTTGGCACTATCC +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQANSTLL*SSLALS
Trigger: GGATAGTGCCAAAGAACTGCAGAGGAGTGTGGAATT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAAATCAGCACAGTGGCTaGCTCAGGGGTAGTGACTGG +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHANQHSG*LRGSDW
Trigger: CCAGTCACTACCCCTGAGGCAGCCACTGTGCTGATT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGAACTGCCTGTCCAATaGGGCAAGGTTATTTTACAC +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAELPVQ*GKVILH
Trigger: GTGTAAAATAACCTTGCCGCATTGGACAGGCAGTTC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS-3UTR GCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTCTAAGAACCTGACGTaGTCCAGGGGTCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHSKNLT*SRGLEA
Trigger: TGCTTCAAGACCCCTGGAGCACGTCAGGTTCTTAGA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGTCGAGATGAAGAACTaGGAGTTTTCTTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAVEMKN*EFSFGQ
Trigger: CTGCCCAAAAGAAAACTCCCAGTTCTTCATCTCGAC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATTCTGCTACATCCACTaGACGCTCCCCATGTTTATT +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAFCYIH*TLPMFI
Trigger: AATAAACATGGGGAGCGTCCAGTGGATGTAGCAGAA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACAGAGTCATACTCAACTaGAGGCCTTGGGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHRVILN*RPWGCH
Trigger: GTGACAACCCCAAGGCCTCCAGTTGAGTATGACTCT...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGCTGTCAGAGTACACTaGGACAAAGGCATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAAVRVH*DKGICF
Trigger: AAAACAGATGCCTTTGTCCCAGTGTACTCTGACAGC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATGGTATGTTCACAAATaGCAGAAGGCATGCTACATC +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAWYVHK*QKACYI
Trigger: GATGTAGCATGCCTTCTGTCATTTGTGAACATACCA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTCTTTCAGGCACATTTaGGAATACCTCAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVSFRHI*EYLRFG
Trigger: CCCAAACCTGAGGTATTCTCAAATGTGCCTGAAAGA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACGTACTTGAAAAACGATaGCGGGAACTGCCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHVLEKR*RELPVQ
Trigger: TTGGACAGGCAGTTCCCGTCATCGTTTTTCAAGTAC...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS-3UTR GCA 90 bp TCATCATCATCATCTTTGAACTCATACTCATCAAGGGCAGATGGAAGAGGTGTTCAACTCCTCTGTTTCTaGTACATCCACTGGACGCTC +
Preference number: 4 (lower is better)
Translates to: SSSSSLNSYSSRADGRGVQLLCF*YIHWTL
Trigger: GAGCGTCCAGTGGATGTAGCAGAAACAGAGGAGTTG...AACACCTCTTCCATCTGCCCTTGATGAGTATGAGTTCAAAGATGATGATGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCACTAGATGGCTCTAAATaGACTGGACTGTCCATTACA +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQALDGSK*TGLSIT
Trigger: TGTAATGGACAGTCCAGTGCATTTAGAGCCATCTAG...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTCCTGGAGTTTGAGCTaGCATTCTAACCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHSWSLS*HSNLWT
Trigger: TGTCCAGAGGTTAGAATGGCAGCTCAAACTCCAGGA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGAGACTAGTATGAAATaGCTTACACTACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAETSMK*LTLLQA
Trigger: TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAATTTGGTGTGGAATCTaGACTGTTGTCTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAIWCGI*TVVSCC
Trigger: ACAGCAAGAGACAACAGTCCAGATTCCACACCAAAT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAATGGATGATTTGGTGTaGAATCTGGACTGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAMDDLV*NLDCCL
Trigger: GAGACAACAGTCCAGATTCCACACCAAATCATCCAT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGGCTGTCAGAGTACACTaGGACAAAGGCATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVAVRVH*DKGICF
Trigger: AAAACAGATGCCTTTGTCCCAGTGTACTCTGACAGC...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCACACTTTCCTTTTCCGTaGATGGTGAATTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAHFPFP*MVNLRI
Trigger: GATCCTCAAATTCACCATCCACGGAAAAGGAAAGTG...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR CAA 72 bp TGTTTGGGCCAACAGTGCTATTTCCCAGACCTCTGGTaGAACCATCAGAACAAAATGCCCTATAAACTTACC +
Preference number: 4 (lower is better)
Translates to: CLGQQCYFPDLW*NHQNKMPYKLT
Trigger: GGTAAGTTTATAGGGCATTTTGTTCTGATGGTTCAACCAGAGGTCTGGGAAATAGCACTGTTGGCCCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGGTTGTTTGTGATGGATaGTTTGGTGTGGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVVVCDG*FGVESG
Trigger: TCCAGATTCCACACCAAATCATCCATCACAAACAAC...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAATCTTTCTGTCGAGATaGAGAACTGGGAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAIFLSR*RTGSFL
Trigger: AAGAAAACTCCCAGTTCTTCATCTCGACAGAAAGAT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACGAAGGATTTACAGATTaGGCCTCTTCGGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHEGFTD*ASSESV
Trigger: CACAGATTCCGAAGAGGCTCAATCTGTAAATCCTTC...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATTGCATATCAGAATTTaGTGTTTCAGGGATGACGGA +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQALHIRI*CFRDDG
Trigger: TCCGTCATCCCTGAAACATCAAATTCTGATATGCAA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACATACAGATCTGGAGCTaGGACCCGGCTTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHIQIWS*DPAFHF
Trigger: AAAATGAAAAGCCGGGTCTCAGCTCCAGATCTGTAT...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGAACATACTTGCTGTTTaGAGCTCCAGTTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVNILAV*SSSWRS
Trigger: ACTTCTCCAACTGGAGCTTCAAACAGCAAGTATGTT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTTTGGTGATGCTTCTTaGATAGTGCTGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVFGDAS*IVLSEY
Trigger: GTACTCTGACAGCACTATTCAAGAAGCATCACCAAA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCTCACTTGCACAGGCTaGGGTACACGTGACACTTTC +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKLTCTG*GTRDTF
Trigger: GAAAGTGTCACGTGTACCTCAGCCTGTGCAAGTGAG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTGGACTGTTGTCTCTTaGTGTCATCTGCATAAGAAG +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVWTVVS*CHLHKK
Trigger: CTTCTTATGCAGATGACAGCAAGAGACAACAGTCCA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAAACATCTGCTCCAGCTaGTATAAGTATCTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQANICSS*YKYLSN
Trigger: GTTGCTAAGATACTTATAGCAGCTGGAGCAGATGTT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATCAAGTGCTTTTCTTTaGTTTCTGCTAGATGCCTCT +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASSAFL*FLLDAS
Trigger: AGAGGCATCTAGCAGAAAGCAAAGAAAAGCACTTGA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGGCAGCTTCATGTTGTTaGCTCATTAAAAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVAASCC*LIKRQV
Trigger: GACCTGTCTTTTAATGAGGCAACAACATGAAGCTGC...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGACCAGTCTGCCAACATaGTCTAATGCAATAGTTACC +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVTSLPT*SNAIVT
Trigger: GGTAACTATTGCATTAGAGCATGTTGGCAGACTGGT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATGTTTGGGCCAACAGTaGTATTTCCCAGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHACLGQQ*YFPDLW
Trigger: CCAGAGGTCTGGGAAATAGCACTGTTGGCCCAAACA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAAAGCAAGTCTATTGGTaGTCTTTTTCCAACAGCATG +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAKQVYW*SFSNSM
Trigger: CATGCTGTTGGAAAAAGAGCACCAATAGACTTGCTT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACAACGATGACGGGAACTaGCTGTCCAATGCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNNDDGN*LSNAAR
Trigger: CCTTGCCGCATTGGACAGGCAGTTCCCGTCATCGTT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS-3UTR CCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGATTTGGTGTGGAATCTaGACTGTTGTCTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVIWCGI*TVVSCC
Trigger: ACAGCAAGAGACAACAGTCCAGATTCCACACCAAAT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGATGGATGATTTGGTGTaGAATCTGGACTGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVMDDLV*NLDCCL
Trigger: GAGACAACAGTCCAGATTCCACACCAAATCATCCAT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTCTGTTTGCATATGGTaGTTTAATCCGCTCCGGCAA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHSVCIW*FNPLRQ
Trigger: TTGCCGGAGCGGATTAAACCACCATATGCAAACAGA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTGCCATTCTAACCTCTaGACAGCATTTAAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHCHSNL*TAFKAA
Trigger: TGCGGCTTTAAATGCTGTCCAGAGGTTAGAATGGCA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTCTGAATTGGTTTTGTaGACCCAGATTTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVSELVL*TQIWAF
Trigger: AAATGCCCAAATCTGGGTTCACAAAACCAATTCAGA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACGTTGTTTGTGATGGATaGTTTGGTGTGGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHVVCDG*FGVESG
Trigger: TCCAGATTCCACACCAAATCATCCATCACAAACAAC...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGGGCAGGCGTTGTTTGTaGTGGATGATTTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEGRRCL*WMIWCG
Trigger: TCCACACCAAATCATCCATCACAAACAACGCCTGCC...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACAATGGATTTCCACCGTaGCGAAGTAACAGCTTTACT +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHNGFPP*RSNSFT
Trigger: AGTAAAGCTGTTACTTCGTCACGGTGGAAATCCATT...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCATCATCATCATCTTTaGACTCATACTCATCAAGGG +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVHHHHL*THTHQG
Trigger: CCCTTGATGAGTATGAGTTCAAAGATGATGATGATG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACGGTGTCAACAGATTGTaGTCTGTTACTTACAGCATC +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHGVNRL*SVTYSI
Trigger: GATGCTGTAAGTAACAGATCACAATCTGTTGACACC...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTTTGGTGATGCTTCTTaGATAGTGCTGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHFGDAS*IVLSEY
Trigger: GTACTCTGACAGCACTATTCAAGAAGCATCACCAAA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTCATGTGAAATGACCTaGGTATCAGTTGTGCTATTC +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVSCEMT*VSVVLF
Trigger: GAATAGCACAACTGATACTCAGGTCATTTCACATGA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTTATGCATTTCTGGTTaGGTTGACTGCTGTGAATGG +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHLCISG*VDCCEW
Trigger: CCATTCACAGCAGTCAACTCAACCAGAAATGCATAA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACAGGCTGAGGTACACGTaGCACTTTCCTTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNRLRYT*HFPFPW
Trigger: CCACGGAAAAGGAAAGTGTCACGTGTACCTCAGCCT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATCCATCCAGGAGATATaGTCCGTTAAATGTTACATA +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASIQEI*SVKCYI
Trigger: TATGTAACATTTAACGGATCATATCTCCTGGATGGA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGTTCGTTGGATACAATaGGTTTTTCCCTTTCAATAC +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAVRWIQ*VFPFQY
Trigger: GTATTGAAAGGGAAAAACTCATTGTATCCAACGAAC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACACCATCAGGAAGTACTaGCTGCTATATAGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHTIRKY*LLYRSQ
Trigger: TTGACTCCTATATAGCAGTCAGTACTTCCTGATGGT...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATACCATTTAAGAGAGTaGGAACTGTGGTTAAGACTA +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAYHLRE*ELWLRL
Trigger: TAGTCTTAACCACAGTTCTCACTCTCTTAAATGGTA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTCTGGACCTTCTTTCTAAAGAAGTCTAATTACTGGGCCAGTGCTCGTAGGGGGGTTTCTCTACCATATTaGTGTCACTGTCAGAATTTT +
Preference number: 4 (lower is better)
Translates to: FWTFFLKKSNYWASARRGVSLPY*CHCQNF
Trigger: AAAATTCTGACAGTGACAGCAATATGGTAGAGAAAC...CCCCCTACGAGCACTGGCCCAGTAATTAGACTTCTTTAGAAAGAAGGTCCAGAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000581635.5
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTCTCTTTCATCTCCTTaGTCACATCACTTCGTTCAA +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVSLSSP*SHHFVQ
Trigger: TTGAACGAAGTGATGTGAGCAAGGAGATGAAAGAGA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATCCAGTTGGAGAAGTTaGAAAACTGGAATGTATGTT +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASSWRS*KTGMYV
Trigger: AACATACATTCCAGTTTTGCAACTTCTCCAACTGGA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGTGGAGGCATAAAGGATaGCGGATCCTGAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEWRHKG*RILSTR
Trigger: TCTTGTGCTCAGGATCCGGCATCCTTTATGCCTCCA...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACCCTGAGTATCAGTTGTaGTATTCTCAACTTCATGGC +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHPEYQL*YSQLHG
Trigger: GCCATGAAGTTGAGAATAGCACAACTGATACTCAGG...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGATTTGCCAATGTTCTTaGAGCTCTGTAATGAACTCG +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVICQCS*SSVMNS
Trigger: CGAGTTCATTACAGAGCTGCAAGAACATTGGCAAAT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGAAATACCTACCAGTCTaGCAACATGCTCTAATGCAA +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVKYLPV*QHALMQ
Trigger: TTGCATTAGAGCATGTTGGCAGACTGGTAGGTATTT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACTTCAACAGAACCAGTaGTTCGAAATCTACCCTGCC +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHALQQNQ*FEIYPA
Trigger: GGCAGGGTAGATTTCGAAGCACTGGTTCTGTTGAAG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGACCATCAGAACAAAATaGCCTATAAACTTACCCCTC +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVTIRTK*PINLPL
Trigger: GAGGGGTAAGTTTATAGGGCATTTTGTTCTGATGGT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATTTATTAGCTTGAAATaGATTTCCACCGTGACGAAG +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAFISLK*ISTVTK
Trigger: CTTCGTCACGGTGGAAATCCATTTCAAGCTAATAAA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACAGTTCCCCTCCTCTCTaGTCTTTTCTGAACAATCTA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHSSPPL*SFLNNL
Trigger: TAGATTGTTCAGAAAAGACCAGAGAGGAGGGGAACT...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCTCAACTGGAGGCCTTaGGGTTGTCACTGTAGTATG +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKLNWRP*GCHCSM
Trigger: CATACTACAGTGACAACCCCAAGGCCTCCAGTTGAG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACCATTACAGTGTTCACTaGGGCAGTATTCTTGATGAG +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHHYSVH*GSILDE
Trigger: CTCATCAAGAATACTGCCCCAGTGAACACTGTAATG...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTAGCACAAGAGTTTCCTaGCAGTTCAGTCTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCSTRVS*QFSLAQ
Trigger: CTGCGCCAGACTGAACTGCCAGGAAACTCTTGTGCT...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACAGCACAAGAGTTTCCTaGCAGTTCAGTCTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNSTRVS*QFSLAQ
Trigger: CTGCGCCAGACTGAACTGCCAGGAAACTCTTGTGCT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGGCATCTGAAAGTGATTaGCTGGGGAAAGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKASESD*LGKEQG
Trigger: GCCTTGCTCTTTCCCCAGCCAATCACTTTCAGATGC...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCAACTTCATGGCCACTaGAAGACTTGTAAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVQLHGH*KTCKLV
Trigger: AACTAACTTACAAGTCTTCCAGTGGCCATGAAGTTG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAAGTACAAGCACTAAATaGCAGTGTTTGATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASTSTK*QCLICQ
Trigger: TTGGCAAATCAAACACTGCCATTTAGTGCTTGTACT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAGCAGGATCAAGTTCCTaGAGTTTGAGCTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAAGSSS*SLSCHS
Trigger: AGAATGGCAGCTCAAACTCCAGGAACTTGATCCTGC...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTATTTCCCAGACCTCTaGTTGAACCATCAGAACAAA +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVYFPDL*LNHQNK
Trigger: TTTGTTCTGATGGTTCAACCAGAGGTCTGGGAAATA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AACACTAGTCAGATTCCAAAATCTTCAACAGTAAACACTGCCATGATTTACCTCAAGAAGTCTAATTACTaGGCCAGTGCTCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: NTSQIPKSSTVNTAMIYLKKSNY*ASARRG
Trigger: CCCCCTACGAGCACTGGCCCAGTAATTAGACTTCTT...GAGGTAAATCATGGCAGTGTTTACTGTTGAAGATTTTGGAATCTGACTAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581635.5
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTCCTTTTCCACTAAATaGAGCCCTATAGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHSFSTK*SPIDSS
Trigger: TGAGGAATCTATAGGGCTTCATTTAGTGGAAAAGGA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGTGGATCACACCAACCTaGCTAGATGGCTCTAAATGC +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEWITPT*LDGSKC
Trigger: GCATTTAGAGCCATCTAGTCAGGTTGGTGTGATCCA...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAAACAGGCATCTCCCATaGTTTATTCTGGATCACACC +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHANRHLP*FILDHT
Trigger: GGTGTGATCCAGAATAAATCATGGGAGATGCCTGTT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCAAGTTCCTGGAGTTTaGGCTGCCATTCTAACCTCT +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKQVPGV*AAILTS
Trigger: AGAGGTTAGAATGGCAGCTCAAACTCCAGGAACTTG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTACCATTTAAGAGAGTaGGAACTGTGGTTAAGACTA +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVYHLRE*ELWLRL
Trigger: TAGTCTTAACCACAGTTCTCACTCTCTTAAATGGTA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATGGAAATACTTTGGGTaGCTATCTCTGTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAWKYFG*LSLWRL
Trigger: AAGCCTCCACAGAGATAGTCACCCAAAGTATTTCCA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp CTCTTTCCAAAATTCTCTATCAAATTCCACACTCCTCTGCAGTTCTTTGGCACTGAAGGATTTACAGATTaGGCCTCTTCGGAATTGATG +
Preference number: 4 (lower is better)
Translates to: LFPKFSIKFHTPLQFFGTEGFTD*ASSELM
Trigger: CATCAATTCCGAAGAGGCTCAATCTGTAAATCCTTC...AGTGCCAAAGAACTGCAGAGGAGTGTGGAATTTGATAGAGAATTTTGGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAAGTTTTGCTGTAGGATaGAATCTTGTCTTTACTCTT +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASFAVG*NLVFTL
Trigger: AAGAGTAAAGACAAGATTGCATCCTACAGCAAAACT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTTTACTATATCTCTGTaGCCACTACTAGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVFTISL*PLLAES
Trigger: TGATTCTGCTAGTAGTGGGCACAGAGATATAGTAAA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATTTTTCTCCATCAAGTaGTTTTCTTTGCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAFFSIK*FSLLSA
Trigger: AGCAGAAAGCAAAGAAAAGCACTTGATGGAGAAAAA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTGGAGGCATAAAGGATaGCGGATCCTGAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNWRHKG*RILSTR
Trigger: TCTTGTGCTCAGGATCCGGCATCCTTTATGCCTCCA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACAAATACCTACCAGTCTaGCAACATGCTCTAATGCAA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHKYLPV*QHALMQ
Trigger: TTGCATTAGAGCATGTTGGCAGACTGGTAGGTATTT...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACAATGCCTTACACTACTaGAGGCATCAATTATGGAGA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHNALHY*RHQLWR
Trigger: TCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATT...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTGTTTGGGCCAACAGTaGTATTTCCCAGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNCLGQQ*YFPDLW
Trigger: CCAGAGGTCTGGGAAATAGCACTGTTGGCCCAAACA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACCTTTGTTGTGGTATTTaGTTTACTGAGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHLCCGI*FTEMVW
Trigger: CCAGACCATCTCAGTAAAGCAAATACCACAACAAAG...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATTTTCCAACAGCATGTaGTCACTTTGTTACCATTTT +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAFSNSM*SLCYHF
Trigger: AAAATGGTAACAAAGTGAGCACATGCTGTTGGAAAA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CCA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAACTCTTTCTTCCATATaGTTTCTCTACCATATTGCT +
Preference number: 4 (lower is better)
Translates to: VTGLLEETSMKCLTLLQATLSSI*FLYHIA
Trigger: AGCAATATGGTAGAGAAACCATATGGAAGAAAGAGT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACTGGGAGTTTTCTTTTaGGCAGGCGTTGTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHALGVFF*AGVVCD
Trigger: ATCACAAACAACGCCTGCCCAAAAGAAAACTCCCAG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATTCTGCTACATCCACTaGACGCTCCCCATGTTTATT +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAFCYIH*TLPMFI
Trigger: AATAAACATGGGGAGCGTCCAGTGGATGTAGCAGAA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACGCATCTGAAAGTGATTaGCTGGGGAAAGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNASESD*LGKEQG
Trigger: GCCTTGCTCTTTCCCCAGCCAATCACTTTCAGATGC...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAAAAGCCTGTTCTGTTTaGGCCAACAGTGCTATTTCC +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAKACSV*ANSAIS
Trigger: GGAAATAGCACTGTTGGCCCAAACAGAACAGGCTTT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGAGGCACCGTCACGCTTaGCTAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVRHRHA*LIFVFL
Trigger: TAAAAATACAAAAATTAGCCAAGCGTGACGGTGCCT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp TCATCATCATCATCTTTGAACTCATACTCATCAAGGGCAGATGGAAGAGGTGTTTTGCATATCAGAATTTaGTGTTTCAGGGATGACGGA +
Preference number: 4 (lower is better)
Translates to: SSSSSLNSYSSRADGRGVLHIRI*CFRDDG
Trigger: TCCGTCATCCCTGAAACATCAAATTCTGATATGCAA...AACACCTCTTCCATCTGCCCTTGATGAGTATGAGTTCAAAGATGATGATGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR TCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAGGTGTCAACAGATTGTaGTCTGTTACTTACAGCATC +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAGVNRL*SVTYSI
Trigger: GATGCTGTAAGTAACAGATCACAATCTGTTGACACC...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGATACAGATCTGGAGCTaGGACCCGGCTTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEIQIWS*DPAFHF
Trigger: AAAATGAAAAGCCGGGTCTCAGCTCCAGATCTGTAT...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGTCCAATTCCCTTTCATaGAGAGCAGGAGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFESNSLS*RAGDLA
Trigger: TGCCAAATCTCCTGCTCTTCATGAAAGGGAATTGGA...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGTCTTTCAGGCACATTTaGGAATACCTCAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFESFRHI*EYLRFG
Trigger: CCCAAACCTGAGGTATTCTCAAATGTGCCTGAAAGA...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAAACATACTTGCTGTTTaGAGCTCCAGTTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHANILAV*SSSWRS
Trigger: ACTTCTCCAACTGGAGCTTCAAACAGCAAGTATGTT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTGGATCACACCAACCTaGCTAGATGGCTCTAAATGC +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNWITPT*LDGSKC
Trigger: GCATTTAGAGCCATCTAGTCAGGTTGGTGTGATCCA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTGGATTTGCTCTCTCTaGACTGTATGGCTGAATCTC +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKWICSL*TVWLNL
Trigger: GAGATTCAGCCATACAGTTCAGAGAGAGCAAATCCA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTCCATCCAGGAGATATaGTCCGTTAAATGTTACATA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHSIQEI*SVKCYI
Trigger: TATGTAACATTTAACGGATCATATCTCCTGGATGGA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TCATCATCATCATCTTTGAACTCATACTCATCAAGGGCAGATGGAAGAGGTGTTTTTTGTATCATTCCTTaGGGGACTTTGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SSSSSLNSYSSRADGRGVFCIIP*GTLTKQ
Trigger: TTGCTTGGTCAAAGTCCCTCAAGGAATGATACAAAA...AACACCTCTTCCATCTGCCCTTGATGAGTATGAGTTCAAAGATGATGATGATGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR TCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTCACAAGTGGGTACTTaGAAAACGATGACGGGAACT +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKSQVGT*KTMTGT
Trigger: AGTTCCCGTCATCGTTTTTCAAGTACCCACTTGTGA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS-3UTR TCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTTCTTTCTCTGTGTCTaGATCTCGTTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHFFLCV*ISFFIS
Trigger: AGAAATGAAGAACGAGATTCAGACACAGAGAAAGAA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCAATTTTTGGAGTTTTaGTGTAGGATGCAATCTTGT +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVQFLEF*CRMQSC
Trigger: ACAAGATTGCATCCTACAGCAAAACTCCAAAAATTG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTACATTGCAAGCTTCATaGAGTGGTGTCCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCTLQAS*SGVQPA
Trigger: TGCAGGTTGGACACCACTGCATGAAGCTTGCAATGT...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACACATTGCAAGCTTCATaGAGTGGTGTCCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNTLQAS*SGVQPA
Trigger: TGCAGGTTGGACACCACTGCATGAAGCTTGCAATGT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACGTAATATCCAACATTaGAAGCTTCATGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHARNIQH*KLHAVV
Trigger: CACCACTGCATGAAGCTTGCAATGTTGGATATTACG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTTTACTATATCTCTGTaGCCACTACTAGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHFTISL*PLLAES
Trigger: TGATTCTGCTAGTAGTGGGCACAGAGATATAGTAAA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGAATTCCACACTCCTCTaGAGTTCTTTGGCACTATCC +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKNSTLL*SSLALS
Trigger: GGATAGTGCCAAAGAACTGCAGAGGAGTGTGGAATT...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTAATTCCACACTCCTCTaGAGTTCTTTGGCACTATCC +
Preference number: 4 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVNSTLL*SSLALS
Trigger: GGATAGTGCCAAAGAACTGCAGAGGAGTGTGGAATT...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR GCA 90 bp CTCTTTCCAAAATTCTCTATCAAATTCCACACTCCTCTGCAGTTCTTTGGCACTTCAAGTGCTTTTCTTTaGTTTCTGCTAGATGCCTCT +
Preference number: 4 (lower is better)
Translates to: LFPKFSIKFHTPLQFFGTSSAFL*FLLDAS
Trigger: AGAGGCATCTAGCAGAAAGCAAAGAAAAGCACTTGA...AGTGCCAAAGAACTGCAGAGGAGTGTGGAATTTGATAGAGAATTTTGGAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR GCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCTTTCAATACTGTGTTaGAAACGTAGTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVLSILC*KRSFIL
Trigger: AAGGATGAAACTACGTTTGCAACACAGTATTGAAAG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTCAGGAAGTACTGACTaGTATATAGGAGTCAATTCA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHSGSTD*YIGVNS
Trigger: TGAATTGACTCCTATATAGCAGTCAGTACTTCCTGA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGACTCTTTCTTCCATATaGTTTCTCTACCATATTGCT +
Preference number: 4 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVTLSSI*FLYHIA
Trigger: AGCAATATGGTAGAGAAACCATATGGAAGAAAGAGT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCTGGGAGTTTTCTTTTaGGCAGGCGTTGTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKLGVFF*AGVVCD
Trigger: ATCACAAACAACGCCTGCCCAAAAGAAAACTCCCAG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGGTCGAGATGAAGAACTaGGAGTTTTCTTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEVEMKN*EFSFGQ
Trigger: CTGCCCAAAAGAAAACTCCCAGTTCTTCATCTCGAC...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CCA 90 bp AGAGGTGTTTTACTGGGAAGTATCTGTTTACTTTCACAGATGAGAGAGTCTTTCCTACTAGCAGAATCATaGAGTGGAGTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: RGVLLGSICLLSQMRESFLLAES*SGVSSS
Trigger: AGATGATGACACTCCACTCCATGATTCTGCTAGTAG...GAAAGACTCTCTCATCTGTGAAAGTAAACAGATACTTCCCAGTAAAACACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACTACTAGCAGAATCATaGAGTGGAGTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHALLAES*SGVSSS
Trigger: AGATGATGACACTCCACTCCATGATTCTGCTAGTAG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTTTCTGCTACATCCACTaGACGCTCCCCATGTTTATT +
Preference number: 4 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVFCYIH*TLPMFI
Trigger: AATAAACATGGGGAGCGTCCAGTGGATGTAGCAGAA...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CCA 90 bp AGAGGTGTTTTACTGGGAAGTATCTGTTTACTTTCACAGATGAGAGAGTCTTTCAGTTCCCCTCCTCTCTaGTCTTTTCTGAACAATCTA +
Preference number: 4 (lower is better)
Translates to: RGVLLGSICLLSQMRESFSSPPL*SFLNNL
Trigger: TAGATTGTTCAGAAAAGACCAGAGAGGAGGGGAACT...GAAAGACTCTCTCATCTGTGAAAGTAAACAGATACTTCCCAGTAAAACACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGAAGTCTGTTTGCATATaGTGGTTTAATCCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKKSVCI*WFNPLR
Trigger: CCGGAGCGGATTAAACCACCATATGCAAACAGACTT...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACGAAGATGACCTAAGATaGGATGTTGAAAGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHEDDLR*DVESLF
Trigger: AAACAGACTTTCAACATCCCATCTTAGGTCATCTTC...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACATTACAGTGTTCACTaGGGCAGTATTCTTGATGAG +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAHYSVH*GSILDE
Trigger: CTCATCAAGAATACTGCCCCAGTGAACACTGTAATG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATTAGAGAATCTACAATaGCTGCCAGAGATTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHALENLQ*LPEIAE
Trigger: CTCAGCAATCTCTGGCAGCCATTGTAGATTCTCTAA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAAGACTGAGAGTCCAATaGTACATTGTATACTTCGGC +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHARLRVQ*YIVYFG
Trigger: GCCGAAGTATACAATGTACCATTGGACTCTCAGTCT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTGCCATTCTAACCTCTaGACAGCATTTAAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKCHSNL*TAFKAA
Trigger: TGCGGCTTTAAATGCTGTCCAGAGGTTAGAATGGCA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp AGGGTCAACACTAGTCAGATTCCAAAATCTTCAACAGTAAACACTGCCATGATTTCTGAATTGGTTTTGTaGACCCAGATTTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: RVNTSQIPKSSTVNTAMISELVL*TQIWAF
Trigger: AAATGCCCAAATCTGGGTTCACAAAACCAATTCAGA...AATCATGGCAGTGTTTACTGTTGAAGATTTTGGAATCTGACTAGTGTTGACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581635.5
CDS-3UTR TCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGAATGGATTTCCACCGTaGCGAAGTAACAGCTTTACT +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKNGFPP*RSNSFT
Trigger: AGTAAAGCTGTTACTTCGTCACGGTGGAAATCCATT...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTAATGGATTTCCACCGTaGCGAAGTAACAGCTTTACT +
Preference number: 4 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVNGFPP*RSNSFT
Trigger: AGTAAAGCTGTTACTTCGTCACGGTGGAAATCCATT...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR TCA 90 bp AGAGGTGTTTTACTGGGAAGTATCTGTTTACTTTCACAGATGAGAGAGTCTTTCTCCTTTTCCACTAAATaGAGCCCTATAGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: RGVLLGSICLLSQMRESFSFSTK*SPIDSS
Trigger: TGAGGAATCTATAGGGCTTCATTTAGTGGAAAAGGA...GAAAGACTCTCTCATCTGTGAAAGTAAACAGATACTTCCCAGTAAAACACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR TCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAATGGCAGGAATCTTCTaGACTAGCAACAGAAATCAT +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAMAGIF*TSNRNH
Trigger: ATGATTTCTGTTGCTAGTTCAGAAGATTCCTGCCAT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTAACAGGCATCTCCCATaGTTTATTCTGGATCACACC +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCNRHLP*FILDHT
Trigger: GGTGTGATCCAGAATAAATCATGGGAGATGCCTGTT...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATCATGTGAAATGACCTaGGTATCAGTTGTGCTATTC +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHASCEMT*VSVVLF
Trigger: GAATAGCACAACTGATACTCAGGTCATTTCACATGA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGACCATCAGGAAGTACTaGCTGCTATATAGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKTIRKY*LLYRSQ
Trigger: TTGACTCCTATATAGCAGTCAGTACTTCCTGATGGT...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTGGACTGTTGTCTCTTaGTGTCATCTGCATAAGAAG +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKWTVVS*CHLHKK
Trigger: CTTCTTATGCAGATGACAGCAAGAGACAACAGTCCA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCAGTGGTGTCCAACCTaGAAAATCTTTCACATTCAC +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKQWCPT*KIFHIH
Trigger: GTGAATGTGAAAGATTTTGCAGGTTGGACACCACTG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TCATCATCATCATCTTTGAACTCATACTCATCAAGGGCAGATGGAAGAGGTGTTTTTACTATATCTCTGTaGCCACTACTAGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: SSSSSLNSYSSRADGRGVFTISL*PLLAES
Trigger: TGATTCTGCTAGTAGTGGGCACAGAGATATAGTAAA...AACACCTCTTCCATCTGCCCTTGATGAGTATGAGTTCAAAGATGATGATGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR GCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCTAGATGGCTCTAAATaGACTGGACTGTCCATTACA +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKLDGSK*TGLSIT
Trigger: TGTAATGGACAGTCCAGTGCATTTAGAGCCATCTAG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACTGGAATTACCAACTTaGACTAGATCACTTCATTCC +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHALELPT*TRSLHS
Trigger: GGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp CTCTTTCCAAAATTCTCTATCAAATTCCACACTCCTCTGCAGTTCTTTGGCACTTTTATTAGCTTGAAATaGATTTCCACCGTGACGAAG +
Preference number: 4 (lower is better)
Translates to: LFPKFSIKFHTPLQFFGTFISLK*ISTVTK
Trigger: CTTCGTCACGGTGGAAATCCATTTCAAGCTAATAAA...AGTGCCAAAGAACTGCAGAGGAGTGTGGAATTTGATAGAGAATTTTGGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTCTGTTTGCATATGGTaGTTTAATCCGCTCCGGCAA +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNSVCIW*FNPLRQ
Trigger: TTGCCGGAGCGGATTAAACCACCATATGCAAACAGA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACAAGTCTGTTTGCATATaGTGGTTTAATCCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNKSVCI*WFNPLR
Trigger: CCGGAGCGGATTAAACCACCATATGCAAACAGACTT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCACTTTCCTTTTCCGTaGATGGTGAATTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKHFPFP*MVNLRI
Trigger: GATCCTCAAATTCACCATCCACGGAAAAGGAAAGTG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATATTTCCCAGACCTCTaGTTGAACCATCAGAACAAA +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAYFPDL*LNHQNK
Trigger: TTTGTTCTGATGGTTCAACCAGAGGTCTGGGAAATA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACAAAGCCTGTTCTGTTTaGGCCAACAGTGCTATTTCC +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNKACSV*ANSAIS
Trigger: GGAAATAGCACTGTTGGCCCAAACAGAACAGGCTTT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACACAATAGTCCCAAACTaGAAACAATCCAAATACCAA +
Preference number: 4 (lower is better)
Translates to: FSPISWNYQLALDHFIPHTIVPN*KQSKYQ
Trigger: TTGGTATTTGGATTGTTTCCAGTTTGGGACTATTGT...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGTCTGAATTGGTTTTGTaGACCCAGATTTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFESELVL*TQIWAF
Trigger: AAATGCCCAAATCTGGGTTCACAAAACCAATTCAGA...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATCGTTCTTCATTTCTTaGTGGGCTAATAGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHASFFIS*WANSKR
Trigger: CCTTTTACTATTAGCCCATCAAGAAATGAAGAACGA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTGGACCTTCTTTCTCTaGGTATGTCCTGTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNWTFFL*VCPVRR
Trigger: TCTTCTTACAGGACATACTCAGAGAAAGAAGGTCCA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAGTTTACTTTCACAGATaGGAGAGTCTTTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAVYFHR*ESLSLF
Trigger: AAACAGAGAAAGACTCTCTCATCTGTGAAAGTAAAC...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTCATCATCATCATCTTTaGACTCATACTCATCAAGGG +
Preference number: 4 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVHHHHL*THTHQG
Trigger: CCCTTGATGAGTATGAGTTCAAAGATGATGATGATG...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR TCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTCCTTTTCCACTAAATaGAGCCCTATAGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKSFSTK*SPIDSS
Trigger: TGAGGAATCTATAGGGCTTCATTTAGTGGAAAAGGA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTTGGTATGTTCACAAATaGCAGAAGGCATGCTACATC +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCWYVHK*QKACYI
Trigger: GATGTAGCATGCCTTCTGTCATTTGTGAACATACCA...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCTTTTTCATGTGAAATaGCCTGAGTATCAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKLFHVK*PEYQLC
Trigger: GCACAACTGATACTCAGGTCATTTCACATGAAAAAG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTTATGCATTTCTGGTTaGGTTGACTGCTGTGAATGG +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNLCISG*VDCCEW
Trigger: CCATTCACAGCAGTCAACTCAACCAGAAATGCATAA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTCTTCCTCTAGGAGATaGGGATTCACTGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNSSSRR*GFTVFF
Trigger: GAAAAAGACAGTGAATCCTCATCTCCTAGAGGAAGA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATCTGAACTGTATGGCTaGATCTCATCTAGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHASELYG*ISSSFR
Trigger: TCTAAAACTAGATGAGATTCAGCCATACAGTTCAGA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTGCCTATTTTCTTTTATaGGGACGCTGTCCATGTACA +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCAYFLL*GRCPCT
Trigger: TGTACATGGACAGCGTCCTCATAAAAGAAAATAGGC...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTTGGGTGATGGTAACATaGGTGTTTACATTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCWVMVT*VFTFVR
Trigger: CCTGACAAATGTAAACACTCATGTTACCATCACCCA...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACACAACTAATGTATGGTaGTGGGAAATCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNTTNVW*WEISTV
Trigger: CACTGTGCTGATTTCCCATCACCATACATTAGTTGT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGTTCAAAACATCATGTTaGGAAACAAGGCAGACAAGG +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEFKTSC*ETRQTR
Trigger: CCTTGTCTGCCTTGTTTCTCAACATGATGTTTTGAA...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGTCTCTTTCATCTCCTTaGTCACATCACTTCGTTCAA +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFESLSSP*SHHFVQ
Trigger: TTGAACGAAGTGATGTGAGCAAGGAGATGAAAGAGA...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp GTCAACACTAGTCAGATTCCAAAATCTTCAACAGTAAACACTGCCATGATTTACTCTCTTTCATCTCCTTaGTCACATCACTTCGTTCAA +
Preference number: 4 (lower is better)
Translates to: VNTSQIPKSSTVNTAMIYSLSSP*SHHFVQ
Trigger: TTGAACGAAGTGATGTGAGCAAGGAGATGAAAGAGA...GTAAATCATGGCAGTGTTTACTGTTGAAGATTTTGGAATCTGACTAGTGTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581635.5
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTCTCTTGCTGTCATCTaGATAAGAAGTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNSLAVI*IRSAIC
Trigger: ACAGATGGCACTTCTTATGCAGATGACAGCAAGAGA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTCAGTGGTGTCCAACCTaGAAAATCTTTCACATTCAC +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCQWCPT*KIFHIH
Trigger: GTGAATGTGAAAGATTTTGCAGGTTGGACACCACTG...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACCGTAATATCCAACATTaGAAGCTTCATGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNRNIQH*KLHAVV
Trigger: CACCACTGCATGAAGCTTGCAATGTTGGATATTACG...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGAACATCTGCTCCAGCTaGTATAAGTATCTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFENICSS*YKYLSN
Trigger: GTTGCTAAGATACTTATAGCAGCTGGAGCAGATGTT...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTAACATCTGCTCCAGCTaGTATAAGTATCTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVNICSS*YKYLSN
Trigger: GTTGCTAAGATACTTATAGCAGCTGGAGCAGATGTT...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR GCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATTGTGTGTTAACATCTaGTCCAGCTGCTATAAGTAT +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHALCVNI*SSCYKY
Trigger: ATACTTATAGCAGCTGGAGCAGATGTTAACACACAA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TCATCATCATCATCTTTGAACTCATACTCATCAAGGGCAGATGGAAGAGGTGTTTTTTTCTCCATCAAGTaGTTTTCTTTGCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSSSSLNSYSSRADGRGVFFSIK*FSLLSA
Trigger: AGCAGAAAGCAAAGAAAAGCACTTGATGGAGAAAAA...AACACCTCTTCCATCTGCCCTTGATGAGTATGAGTTCAAAGATGATGATGATGA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACCCTGAGTATCAGTTGTaGTATTCTCAACTTCATGGC +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNPEYQL*YSQLHG
Trigger: GCCATGAAGTTGAGAATAGCACAACTGATACTCAGG...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTGGGAATACAAATCTTaGTTAAGGGGTTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKWEYKS*LRGFHP
Trigger: TGGATGGAAACCCCTTAAGCAAGATTTGTATTCCCA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGATTTGCCAATGTTCTTaGAGCTCTGTAATGAACTCG +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKICQCS*SSVMNS
Trigger: CGAGTTCATTACAGAGCTGCAAGAACATTGGCAAAT...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTTGGCAGTGTTTGATTTaGCAATGTTCTTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCWQCLI*QCSCSS
Trigger: AGAGCTGCAAGAACATTGGCAAATCAAACACTGCCA...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTGGCAGTGTTTGATTTaGCAATGTTCTTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNWQCLI*QCSCSS
Trigger: AGAGCTGCAAGAACATTGGCAAATCAAACACTGCCA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGAGACATGAATTGTCTTaGATTAAAGCGATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFERHELS*IKAIPH
Trigger: GTGAGGGATCGCTTTAATGCAAGACAATTCATGTCT...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTGCAGCTTCATGTTGTTaGCTCATTAAAAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCAASCC*LIKRQV
Trigger: GACCTGTCTTTTAATGAGGCAACAACATGAAGCTGC...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGAATGCCTTACACTACTaGAGGCATCAATTATGGAGA +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKNALHY*RHQLWR
Trigger: TCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATT...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGCTGGAATTACCAACTTaGACTAGATCACTTCATTCC +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFELELPT*TRSLHS
Trigger: GGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAG...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACCTTCGAAATCTACCCTaGCTTTCTGGCCCAATTTAT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNLRNLP*LSGPIY
Trigger: ATAAATTGGGCCAGAAAGGCAGGGTAGATTTCGAAG...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACAGGATTTATCAAACTaGCTAGTTAAGATCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAQDLSN*LVKIWV
Trigger: TACCCAGATCTTAACTAGGCAGTTTGATAAATCCTG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTCTACTAGCAGAATCATaGAGTGGAGTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCLLAES*SGVSSS
Trigger: AGATGATGACACTCCACTCCATGATTCTGCTAGTAG...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACAGTTCCCCTCCTCTCTaGTCTTTTCTGAACAATCTA +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNSSPPL*SFLNNL
Trigger: TAGATTGTTCAGAAAAGACCAGAGAGGAGGGGAACT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAATCCACAAGAATGTTTaGGAGATTTACCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAIHKNV*EIYQWK
Trigger: TTTCCACTGGTAAATCTCCCAAACATTCTTGTGGAT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCAACTTCATGGCCACTaGAAGACTTGTAAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKQLHGH*KTCKLV
Trigger: AACTAACTTACAAGTCTTCCAGTGGCCATGAAGTTG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAGTTGACTGCTGTGAATaGTTTTCCAGACTTGATAAA +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAVDCCE*FSRLDK
Trigger: TTTATCAAGTCTGGAAAACCATTCACAGCAGTCAAC...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTTAGAGAATCTACAATaGCTGCCAGAGATTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNLENLQ*LPEIAE
Trigger: CTCAGCAATCTCTGGCAGCCATTGTAGATTCTCTAA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACAGACTGAGAGTCCAATaGTACATTGTATACTTCGGC +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNRLRVQ*YIVYFG
Trigger: GCCGAAGTATACAATGTACCATTGGACTCTCAGTCT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGTTCTCTCCCATTAGCTaGAATTACCAACTTGCACTA +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEFSPIS*NYQLAL
Trigger: TAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTTCTCTCCCATTAGCTaGAATTACCAACTTGCACTA +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKFSPIS*NYQLAL
Trigger: TAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
3UTR CAA 72 bp GTTAGGTGCAACATGGATGAATTTCAAAACATCATGTaGAGAAACAAGGCAGACAAGGAAGTATGTATGACT +
Preference number: 4 (lower is better)
Translates to: VRCNMDEFQNIM*RNKADKEVCMT
Trigger: AGTCATACATACTTCCTTGTCTGCCTTGTTTCTCAACATGATGTTTTGAAATTCATCCATGTTGCACCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTTTGCATATCAGAATTTaGTGTTTCAGGGATGACGGA +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCLHIRI*CFRDDG
Trigger: TCCGTCATCCCTGAAACATCAAATTCTGATATGCAA...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTTTCTCAAAGTTTGGTaGTGCTTCTTGAATAGTGCT +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKFLKVW*CFLNSA
Trigger: AGCACTATTCAAGAAGCATCACCAAACTTTGAGAAA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTTTGTGTGTTAACATCTaGTCCAGCTGCTATAAGTAT +
Preference number: 4 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVLCVNI*SSCYKY
Trigger: ATACTTATAGCAGCTGGAGCAGATGTTAACACACAA...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR GCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTCCAGTTGGAGAAGTTaGAAAACTGGAATGTATGTT +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKSSWRS*KTGMYV
Trigger: AACATACATTCCAGTTTTGCAACTTCTCCAACTGGA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACCAGACTTGATAAAATaGTTTGTTGAGATTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PYTTAGINYGELNYRKHAPDLIK*FVEIPH
Trigger: ATGAGGAATCTCAACAAAGCATTTTATCAAGTCTGG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTGGGAATACAAATCTTaGTTAAGGGGTTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNWEYKS*LRGFHP
Trigger: TGGATGGAAACCCCTTAAGCAAGATTTGTATTCCCA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACAGACATGAATTGTCTTaGATTAAAGCGATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNRHELS*IKAIPH
Trigger: GTGAGGGATCGCTTTAATGCAAGACAATTCATGTCT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTCAGGAAGTACTGACTaGTATATAGGAGTCAATTCA +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKSGSTD*YIGVNS
Trigger: TGAATTGACTCCTATATAGCAGTCAGTACTTCCTGA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTACCATCAGAACAAAATaGCCTATAAACTTACCCCTC +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCTIRTK*PINLPL
Trigger: GAGGGGTAAGTTTATAGGGCATTTTGTTCTGATGGT...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTTTATTAGCTTGAAATaGATTTCCACCGTGACGAAG +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKFISLK*ISTVTK
Trigger: CTTCGTCACGGTGGAAATCCATTTCAAGCTAATAAA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGATCCACAAGAATGTTTaGGAGATTTACCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKIHKNV*EIYQWK
Trigger: TTTCCACTGGTAAATCTCCCAAACATTCTTGTGGAT...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGAGTACAAGCACTAAATaGCAGTGTTTGATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKSTSTK*QCLICQ
Trigger: TTGGCAAATCAAACACTGCCATTTAGTGCTTGTACT...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTGTTTACTTTCACAGATaGGAGAGTCTTTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCVYFHR*ESLSLF
Trigger: AAACAGAGAAAGACTCTCTCATCTGTGAAAGTAAAC...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTTTCTCAAAGTTTGGTaGTGCTTCTTGAATAGTGCT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNFLKVW*CFLNSA
Trigger: AGCACTATTCAAGAAGCATCACCAAACTTTGAGAAA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTTCTGAACTGTATGGCTaGATCTCATCTAGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCSELYG*ISSSFR
Trigger: TCTAAAACTAGATGAGATTCAGCCATACAGTTCAGA...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR TCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACGTTCGTTGGATACAATaGGTTTTTCCCTTTCAATAC +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNVRWIQ*VFPFQY
Trigger: GTATTGAAAGGGAAAAACTCATTGTATCCAACGAAC...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR TCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTGAATTCTACTTTTACTaGCTGGAAATACTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCEFYFY*LEILWV
Trigger: CACCCAAAGTATTTCCAGTCAGTAAAAGTAGAATTC...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGGTTTCTCTACCATATTaGTGTCACTGTCAGAATTTT +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKVSLPY*CHCQNF
Trigger: AAAATTCTGACAGTGACAGCAATATGGTAGAGAAAC...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp GTCAACACTAGTCAGATTCCAAAATCTTCAACAGTAAACACTGCCATGATTTACCAATTTTTGGAGTTTTaGTGTAGGATGCAATCTTGT +
Preference number: 4 (lower is better)
Translates to: VNTSQIPKSSTVNTAMIYQFLEF*CRMQSC
Trigger: ACAAGATTGCATCCTACAGCAAAACTCCAAAAATTG...GTAAATCATGGCAGTGTTTACTGTTGAAGATTTTGGAATCTGACTAGTGTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581635.5
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTTGTGTGTTAACATCTaGTCCAGCTGCTATAAGTAT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNLCVNI*SSCYKY
Trigger: ATACTTATAGCAGCTGGAGCAGATGTTAACACACAA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp AACACTAGTCAGATTCCAAAATCTTCAACAGTAAACACTGCCATGATTTACCTCTTCAACAGTAAACACTaGCATGATTTACCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: NTSQIPKSSTVNTAMIYLFNSKH*HDLPLL
Trigger: TAACAGAGGTAAATCATGGCAGTGTTTACTGTTGAA...GAGGTAAATCATGGCAGTGTTTACTGTTGAAGATTTTGGAATCTGACTAGTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581635.5
CDS-3UTR CCA 90 bp TGGATAACCAAAAAGAATGCTAACTGGTGTGGATTTCTTATTTCCAGCTTCCTTACTCTTTCTTCCATATaGTTTCTCTACCATATTGCT +
Preference number: 4 (lower is better)
Translates to: WITKKNANWCGFLISSFLTLSSI*FLYHIA
Trigger: AGCAATATGGTAGAGAAACCATATGGAAGAAAGAGT...AAGGAAGCTGGAAATAAGAAATCCACACCAGTTAGCATTCTTTTTGGTTATCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581635.5
CDS-3UTR CCA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGGAAGAGGTGTTTTACTaGGAAGTATCTGTTTACTTT +
Preference number: 4 (lower is better)
Translates to: EMPYTTAGINYGELNYRKEEVFY*EVSVYF
Trigger: AAAGTAAACAGATACTTCCCAGTAAAACACCTCTTC...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACGAAGATGACCTAAGATaGGATGTTGAAAGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNEDDLR*DVESLF
Trigger: AAACAGACTTTCAACATCCCATCTTAGGTCATCTTC...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACAGGTATGTTAGAATTTaGGCAGATAAAGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNRYVRI*ADKVSG
Trigger: ACCAGAGACTTTATCTGCCCAAATTCTAACATACCT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACGTTGACTGCTGTGAATaGTTTTCCAGACTTGATAAA +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNVDCCE*FSRLDK
Trigger: TTTATCAAGTCTGGAAAACCATTCACAGCAGTCAAC...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGCTGTTAGGTGCAACATaGATGAATTTCAAAACATCA +
Preference number: 4 (lower is better)
Translates to: NNCLIVKSHSNELHGVFELLGAT*MNFKTS
Trigger: TGATGTTTTGAAATTCATCCATGTTGCACCTAACAG...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACGTTTCTCTACCATATTaGTGTCACTGTCAGAATTTT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNVSLPY*CHCQNF
Trigger: AAAATTCTGACAGTGACAGCAATATGGTAGAGAAAC...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTAGTTTTGCTGTAGGATaGAATCTTGTCTTTACTCTT +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCSFAVG*NLVFTL
Trigger: AAGAGTAAAGACAAGATTGCATCCTACAGCAAAACT...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTTTTTCTCCATCAAGTaGTTTTCTTTGCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNFFSIK*FSLLSA
Trigger: AGCAGAAAGCAAAGAAAAGCACTTGATGGAGAAAAA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACCCAGACTTGATAAAATaGTTTGTTGAGATTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNPDLIK*FVEIPH
Trigger: ATGAGGAATCTCAACAAAGCATTTTATCAAGTCTGG...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACCTTTCAATACTGTGTTaGAAACGTAGTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNLSILC*KRSFIL
Trigger: AAGGATGAAACTACGTTTGCAACACAGTATTGAAAG...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR GCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTGCTTTGCTTTATTGTaGTTTGTACATATTGGCGTT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNCFALL*FVHIGV
Trigger: AACGCCAATATGTACAAAGCACAATAAAGCAAAGCA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CCA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACGAAGAGGTGTTTTACTaGGAAGTATCTGTTTACTTT +
Preference number: 4 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNEEVFY*EVSVYF
Trigger: AAAGTAAACAGATACTTCCCAGTAAAACACCTCTTC...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CCA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTATAGCATTTAACCACTaGGAAAACCCAACCATTTTT +
Preference number: 4 (lower is better)
Translates to: FVACLIQAILFYCALLYCIAFNH*ENPTIF
Trigger: AAAAATGGTTGGGTTTTCCCAGTGGTTAAATGCTAT...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS GCA 90 bp GACCCGAGGCAAGGCCGGCGCAGGAGGCTTCACCCCCGGAACGAGTaGTTCGGCGTAGCCGTCGCTGTCGTTGTCTTCGTCGCCGCTGCA +
Preference number: 5 (lower is better)
Translates to: DPRQGRRRRLHPRNE*FGVAVAVVVFVAAA
Trigger: TGCAGCGGCGACGAAGACAACGACAGCGACGGCTACGCCGAAGCACTCGTTCCGGGGGTGAAGCCTCCTGCGCCGGCCTTGCCTCGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577992.1
CDS GCA 90 bp GATCCGAGGCAAGGCCGGCGCAGGAGGCTTCACCCCCGGAACGAGTaGTTCGGCGTAGCCGTCGCTGTCGTTGTCTTCGTCGCCGCTGCA +
Preference number: 5 (lower is better)
Translates to: DPRQGRRRRLHPRNE*FGVAVAVVVFVAAA
Trigger: TGCAGCGGCGACGAAGACAACGACAGCGACGGCTACGCCGAAGCACTCGTTCCGGGGGTGAAGCCTCCTGCGCCGGCCTTGCCTCGGATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262126.9
ENST00000540578.6
ENST00000581635.5
CDS TCA 90 bp GGGAAAGAGCAAGGCTGCTGTGGAGGCATAAAGGATGCCGGATCCTaGGCACAAGAGTTTCCTGGCAGTTCAGTCTGGCGCAGGGATAAA +
Preference number: 5 (lower is better)
Translates to: GKEQGCCGGIKDAGS*AQEFPGSSVWRRDK
Trigger: TTTATCCCTGCGCCAGACTGAACTGCCAGGAAACTCTTGTGCTCAGGATCCGGCATCCTTTATGCCTCCACAGCAGCCTTGCTCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS TCA 90 bp AACCTGACGTGCTCCAGGGGTCTTGAAGCATCACAAGTGGGTACTTaGAAAACGATGACGGGAACTGCCTGTCCAATGCGGCAAGGTTAT +
Preference number: 5 (lower is better)
Translates to: NLTCSRGLEASQVGT*KTMTGTACPMRQGY
Trigger: ATAACCTTGCCGCATTGGACAGGCAGTTCCCGTCATCGTTTTTCAAGTACCCACTTGTGATGCTTCAAGACCCCTGGAGCACGTCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS-3UTR CAA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGCCGCCGGAGCCGGGCTaGAAAACATCTCCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEPPEPG*KTSPVS
Trigger: CGAGACCGGAGATGTTTTCAAGCCCGGCTCCGGCGG...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS TCA 90 bp AACTGGAGGCCTTGGGGTTGTCACTGTAGTATGGCAGGAATCTTCTaGACTAGCAACAGAAATCATGGATACAGATCTGGAGCTGAGACC +
Preference number: 5 (lower is better)
Translates to: NWRPWGCHCSMAGIF*TSNRNHGYRSGAET
Trigger: GGTCTCAGCTCCAGATCTGTATCCATGATTTCTGTTGCTAGTTCAGAAGATTCCTGCCATACTACAGTGACAACCCCAAGGCCTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CCA 90 bp GTGGCAGGATCAAGTTCCTGGAGTTTGAGCTGCCATTCTAACCTCTaGACAGCATTTAAAGCCGCAGCTTCATGTTGTTGCCTCATTAAA +
Preference number: 5 (lower is better)
Translates to: VAGSSSWSLSCHSNL*TAFKAAASCCCLIK
Trigger: TTTAATGAGGCAACAACATGAAGCTGCGGCTTTAAATGCTGTCCAGAGGTTAGAATGGCAGCTCAAACTCCAGGAACTTGATCCTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATCAAGTTCCTGGAGTTaGAGCTGCCATTCTAACCTC +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASSSWS*SCHSNL
Trigger: GAGGTTAGAATGGCAGCTCAAACTCCAGGAACTTGA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CCA 90 bp GACAAAGACATATGTTTAGAAATCGATTCAGCATCTGAAAGTGATTaGCTGGGGAAAGAGCAAGGCTGCTGTGGAGGCATAAAGGATGCC +
Preference number: 5 (lower is better)
Translates to: DKDICLEIDSASESD*LGKEQGCCGGIKDA
Trigger: GGCATCCTTTATGCCTCCACAGCAGCCTTGCTCTTTCCCCAGCCAATCACTTTCAGATGCTGAATCGATTTCTAAACATATGTCTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATCTTTTGGGCAGGCGTaGTTTGTGATGGATGATTTG +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASFGQA*FVMDDL
Trigger: CAAATCATCCATCACAAACAACGCCTGCCCAAAAGA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCACTCTTTCAGGCACATTaGAGAATACCTCAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQALFQAH*RIPQVW
Trigger: CCAAACCTGAGGTATTCTCAAATGTGCCTGAAAGAG...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATTCCCAGACCTCTGGTaGAACCATCAGAACAAAATG +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAFPDLW*NHQNKM
Trigger: CATTTTGTTCTGATGGTTCAACCAGAGGTCTGGGAA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCACTGACTGGAAATACTTaGGGTGACTATCTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQALTGNT*GDYLCG
Trigger: TCCACAGAGATAGTCACCCAAAGTATTTCCAGTCAG...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS TCA 90 bp CTATCAACAGGCATCTCCCATGATTTATTCTGGATCACACCAACCTaGCTAGATGGCTCTAAATGCACTGGACTGTCCATTACAGTGTTC +
Preference number: 5 (lower is better)
Translates to: LSTGISHDLFWITPT*LDGSKCTGLSITVF
Trigger: GAACACTGTAATGGACAGTCCAGTGCATTTAGAGCCATCTAGTCAGGTTGGTGTGATCCAGAATAAATCATGGGAGATGCCTGTTGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS GCA 90 bp ACAATCTGGAATTTGCTGATTGCATACACTTGGTATAGTTCAACTTaGTCCGCTGAGCTTGGCATTTCCTGCAAATTGGTAGCTGGATCC +
Preference number: 5 (lower is better)
Translates to: TIWNLLIAYTWYSST*SAELGISCKLVAGS
Trigger: GGATCCAGCTACCAATTTGCAGGAAATGCCAAGCTCAGCGGAGCAAGTTGAACTATACCAAGTGTATGCAATCAGCAAATTCCAGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540578.6
CDS CCA 90 bp TCAGAGTCATACTCAACTGGAGGCCTTGGGGTTGTCACTGTAGTATaGCAGGAATCTTCTGAACTAGCAACAGAAATCATGGATACAGAT +
Preference number: 5 (lower is better)
Translates to: SESYSTGGLGVVTVV*QESSELATEIMDTD
Trigger: ATCTGTATCCATGATTTCTGTTGCTAGTTCAGAAGATTCCTGCCATACTACAGTGACAACCCCAAGGCCTCCAGTTGAGTATGACTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCTCCTCTGCAGTTCTTaGGCACTATCCTTAGTTTTG +
Preference number: 5 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVLLCSS*ALSLVL
Trigger: CAAAACTAAGGATAGTGCCAAAGAACTGCAGAGGAG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGATTTGCCAATGTTCTaGCAGCTCTGTAATGAACTC +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQADLPMF*QLCNEL
Trigger: GAGTTCATTACAGAGCTGCAAGAACATTGGCAAATC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCGTTTATTCAACGCTTaGGGATCTGTAAGGATGCGT +
Preference number: 5 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVRLFNA*GSVRMR
Trigger: ACGCATCCTTACAGATCCCAAAGCGTTGAATAAACG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS GCA 90 bp TGTGGAATCTGGACTGTTGTCTCTTGCTGTCATCTGCATAAGAAGTaGCATCTGTTTTCGCTCAGAGAGTGGATAACCAAAAAGAATGCT +
Preference number: 5 (lower is better)
Translates to: CGIWTVVSCCHLHKK*HLFSLREWITKKNA
Trigger: AGCATTCTTTTTGGTTATCCACTCTCTGAGCGAAAACAGATGGCACTTCTTATGCAGATGACAGCAAGAGACAACAGTCCAGATTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262126.9
ENST00000400020.7
ENST00000540578.6
ENST00000581758.1
CDS GCA 90 bp TACACTTGGTATAGTTCAACTTGCTCCGCTGAGCTTGGCATTTCCTaGAAATTGGTAGCTGGATCCTGTGTAACTTTCATCATCATCAGA +
Preference number: 5 (lower is better)
Translates to: YTWYSSTCSAELGIS*KLVAGSCVTFIIIR
Trigger: TCTGATGATGATGAAAGTTACACAGGATCCAGCTACCAATTTGCAGGAAATGCCAAGCTCAGCGGAGCAAGTTGAACTATACCAAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540578.6
CDS CCA 90 bp CTGTTTGGCTTTCTCACAATCTGGAATTTGCTGATTGCATACACTTaGTATAGTTCAACTTGCTCCGCTGAGCTTGGCATTTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LFGFLTIWNLLIAYT*YSSTCSAELGISCK
Trigger: TTTGCAGGAAATGCCAAGCTCAGCGGAGCAAGTTGAACTATACCAAGTGTATGCAATCAGCAAATTCCAGATTGTGAGAAAGCCAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540578.6
CDS-3UTR CAA 90 bp CTTTTCTGGACCTTCTTTCTAAAGAAGTCTAATTACTGGGCCAGTGCTCGTAGGTTTGTGAACCCAGATTaGGGCATTTTACAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LFWTFFLKKSNYWASARRFVNPD*GILQLF
Trigger: GAACAGCTGTAAAATGCCCAAATCTGGGTTCACAAA...CCTACGAGCACTGGCCCAGTAATTAGACTTCTTTAGAAAGAAGGTCCAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581635.5
CDS-3UTR CAA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTTTGTGATGGATGATTaGGTGTGGAATCTGGACTGT +
Preference number: 5 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVFVMDD*VWNLDC
Trigger: ACAGTCCAGATTCCACACCAAATCATCCATCACAAA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGCCCATGTTTATTAGCTaGAAATGGATTTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVPMFIS*KWISTV
Trigger: CACGGTGGAAATCCATTTCAAGCTAATAAACATGGG...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACGAGAATACCTCAGGTTaGGGAGAAGGACTAGTATCT +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHENTSG*GEGLVS
Trigger: AGATACTAGTCCTTCTCCCAAACCTGAGGTATTCTC...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACGTGGGAATACAAATCTaGCTTAAGGGGTTTCCATCC +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHVGIQI*LKGFPS
Trigger: GGATGGAAACCCCTTAAGCAAGATTTGTATTCCCAC...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAAACTCGCAAAACTTCTaGTTCGTTGGATACAATGAG +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQANSQNF*FVGYNE
Trigger: CTCATTGTATCCAACGAACAAGAAGTTTTGCGAGTT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATCATCCTGGATCTCTTaGTACAACCGTTTATTCAAC +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASSWIS*YNRLFN
Trigger: GTTGAATAAACGGTTGTACAAAGAGATCCAGGATGA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS TCA 90 bp TTAAAGAACCAAGGCTGTTTGGCTTTCTCACAATCTGGAATTTGCTaGTTGCATACACTTGGTATAGTTCAACTTGCTCCGCTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: LKNQGCLAFSQSGIC*LHTLGIVQLAPLSL
Trigger: CAAGCTCAGCGGAGCAAGTTGAACTATACCAAGTGTATGCAATCAGCAAATTCCAGATTGTGAGAAAGCCAAACAGCCTTGGTTCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540578.6
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTTTGTGAACCCAGATTaGGGCATTTTACAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHFVNPD*GILQLF
Trigger: GAACAGCTGTAAAATGCCCAAATCTGGGTTCACAAA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTTCTCTTTCATCTCCTaGCTCACATCACTTCGTTCA +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHFSFIS*LTSLRS
Trigger: TGAACGAAGTGATGTGAGCAAGGAGATGAAAGAGAA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATCATCATCATCATCTTaGAACTCATACTCATCAAGG +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASSSSS*NSYSSR
Trigger: CCTTGATGAGTATGAGTTCAAAGATGATGATGATGA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAATAGCAGCAGTATTTTaGCTCTTCTCACCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAIAAVF*LFSPSL
Trigger: TAAAGAAGGTGAGAAGAGCAAAAATACTGCTGCTAT...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTTAGGTTGTTTCTCCTaGGTATATGCATCAGTCACT +
Preference number: 5 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVLGCFS*VYASVT
Trigger: AGTGACTGATGCATATACCAAGGAGAAACAACCTAA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTCAGCTGAAACATACTaGCTGTTTGAAGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHSAETY*LFEAPV
Trigger: AACTGGAGCTTCAAACAGCAAGTATGTTTCAGCTGA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACGCATTTCTGGTTGAGTaGACTGCTGTGAATGGTTTT +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHAFLVE*TAVNGF
Trigger: AAAACCATTCACAGCAGTCAACTCAACCAGAAATGC...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGTTTCTAGTCATTCTTaGAGGGATTTGGTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAVSSHS*RDLVFS
Trigger: ACTGAAAACCAAATCCCTCAAAGAATGACTAGAAAC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACGCTGAGTTTTCTCTTTaGCTTGTAGTAAAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHAEFSL*LVVKRD
Trigger: GTCCCTCTTTACTACAAGCAAAAGAGAAAACTCAGC...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGAACTCGCAAAACTTCTaGTTCGTTGGATACAATGAG +
Preference number: 5 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVNSQNF*FVGYNE
Trigger: CTCATTGTATCCAACGAACAAGAAGTTTTGCGAGTT...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATCAAGTTCCTGGAGTTaGAGCTGCCATTCTAACCTC +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHASSSWS*SCHSNL
Trigger: GAGGTTAGAATGGCAGCTCAAACTCCAGGAACTTGA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCATCATTCCTCACATATTaGCTTCACTTTTCTCTATCG +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQASFLTY*LHFSLS
Trigger: CGATAGAGAAAAGTGAAGCAAATATGTGAGGAATGA...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTTACAAATTGAAGGTTaGTGGCAACCCTGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHLQIEG*WQPCFK
Trigger: CTTGAAGCAGGGTTGCCACAAACCTTCAATTTGTAA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp GTCACAGGTCTACTAGAGGAGACTAGTATGAAATGCCTTACACTACTGCAGGCAGTTATTGATATTCTCTaGAGTGATGAGTGCATAGGT +
Preference number: 5 (lower is better)
Translates to: VTGLLEETSMKCLTLLQAVIDIL*SDECIG
Trigger: ACCTATGCACTCATCACTCAAGAGAATATCAATAAC...TGCCTGCAGTAGTGTAAGGCATTTCATACTAGTCTCCTCTAGTAGACCTGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAAGCAATTTCCCCTTCTaGATTTCATCCACCTCTCCC +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHASNFPF*ISSTSP
Trigger: GGGAGAGGTGGATGAAATCAAGAAGGGGAAATTGCT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS GCA 90 bp CTTGAGCATCACCAGTTTAGGACAATACCATCAGGAAGTACTGACTaGTATATAGGAGTCAATTCAAAGTCGTCGTTAACATCAACAAGG +
Preference number: 5 (lower is better)
Translates to: LEHHQFRTIPSGSTD*YIGVNSKSSLTSTR
Trigger: CCTTGTTGATGTTAACGACGACTTTGAATTGACTCCTATATAGCAGTCAGTACTTCCTGATGGTATTGTCCTAAACTGGTGATGCTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACGGTTTCTCTACCATATaGCTGTCACTGTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHGFSTI*LSLSEF
Trigger: AAATTCTGACAGTGACAGCAATATGGTAGAGAAACC...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTCATCATCATCATCTTaGAACTCATACTCATCAAGG +
Preference number: 5 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVSSSSS*NSYSSR
Trigger: CCTTGATGAGTATGAGTTCAAAGATGATGATGATGA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACAATCCACAAGAATGTTaGGGAGATTTACCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHNPQEC*GDLPVE
Trigger: TTCCACTGGTAAATCTCCCAAACATTCTTGTGGATT...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AGAGGTGTTTTACTGGGAAGTATCTGTTTACTTTCACAGATGAGAGAGTCTTTCCTCCTCTGCAGTTCTTaGGCACTATCCTTAGTTTTG +
Preference number: 5 (lower is better)
Translates to: RGVLLGSICLLSQMRESFLLCSS*ALSLVL
Trigger: CAAAACTAAGGATAGTGCCAAAGAACTGCAGAGGAG...GAAAGACTCTCTCATCTGTGAAAGTAAACAGATACTTCCCAGTAAAACACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACTTAGGTTGTTTCTCCTaGGTATATGCATCAGTCACT +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHLGCFS*VYASVT
Trigger: AGTGACTGATGCATATACCAAGGAGAAACAACCTAA...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAGAGAATACCTCAGGTTaGGGAGAAGGACTAGTATCT +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAENTSG*GEGLVS
Trigger: AGATACTAGTCCTTCTCCCAAACCTGAGGTATTCTC...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACTCTTTCAGGCACATTaGAGAATACCTCAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHALFQAH*RIPQVW
Trigger: CCAAACCTGAGGTATTCTCAAATGTGCCTGAAAGAG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATGTTTGAAGCTCCAGTaGGAGAAGTTGCAAAACTGG +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHACLKLQ*EKLQNW
Trigger: CCAGTTTTGCAACTTCTCCAACTGGAGCTTCAAACA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTCTCTCCCATTAGCTGGAATTACCAACTTGCACTAGATCACTTCATTCCTCACACTAAATGGCAGTGTTaGATTTGCCAATGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: FSPISWNYQLALDHFIPHTKWQC*ICQCSC
Trigger: GCAAGAACATTGGCAAATCAAACACTGCCATTTAGT...GTGAGGAATGAAGTGATCTAGTGCAAGTTGGTAATTCCAGCTAATGGGAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGGAGTCCAATGGTACATaGTATACTTCGGCATCCAGC +
Preference number: 5 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEESNGT*YTSASS
Trigger: GCTGGATGCCGAAGTATACAATGTACCATTGGACTC...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGGAGTCCAATGGTACATaGTATACTTCGGCATCCAGC +
Preference number: 5 (lower is better)
Translates to: EMPYTTAGINYGELNYRKESNGT*YTSASS
Trigger: GCTGGATGCCGAAGTATACAATGTACCATTGGACTC...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAAAAAGCCTGTTCTGTTaGGGCCAACAGTGCTATTTC +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAKSLFC*GQQCYF
Trigger: GAAATAGCACTGTTGGCCCAAACAGAACAGGCTTTT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AGCATAATCATGGCAGAGAGGCTCCAGCTTTTTGAGGTACCATTTAAGAGAGTGTCACCAGATTCCTTCTaGTCGCTTTTATCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: SIIMAERLQLFEVPFKRVSPDSF*SLLSSK
Trigger: TTTAGAAGATAAAAGCGACAAGAAGGAATCTGGTGA...CACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCCATGATTATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAAGAGGCTCCAGCTTTTaGAGGTACCATTTAAGAGAG +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHARGSSF*RYHLRE
Trigger: CTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAATCACAAGTGGGTACTaGAAAAACGATGACGGGAAC +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAITSGY*KNDDGN
Trigger: GTTCCCGTCATCGTTTTTCAAGTACCCACTTGTGAT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS GCA 90 bp AACAGTACAAGCACTAAATGGCAGTGTTTGATTTGCCAATGTTCTTaGAGCTCTGTAATGAACTCGCAAAACTTCTTGTTCGTTGGATAC +
Preference number: 5 (lower is better)
Translates to: NSTSTKWQCLICQCS*SSVMNSQNFLFVGY
Trigger: GTATCCAACGAACAAGAAGTTTTGCGAGTTCATTACAGAGCTGCAAGAACATTGGCAAATCAAACACTGCCATTTAGTGCTTGTACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATTTGTGAACCCAGATTaGGGCATTTTACAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAFVNPD*GILQLF
Trigger: GAACAGCTGTAAAATGCCCAAATCTGGGTTCACAAA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AGGGTCAACACTAGTCAGATTCCAAAATCTTCAACAGTAAACACTGCCATGATTTTCTCTTTCATCTCCTaGCTCACATCACTTCGTTCA +
Preference number: 5 (lower is better)
Translates to: RVNTSQIPKSSTVNTAMIFSFIS*LTSLRS
Trigger: TGAACGAAGTGATGTGAGCAAGGAGATGAAAGAGAA...AATCATGGCAGTGTTTACTGTTGAAGATTTTGGAATCTGACTAGTGTTGACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581635.5
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATTTGTGATGGATGATTaGGTGTGGAATCTGGACTGT +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAFVMDD*VWNLDC
Trigger: ACAGTCCAGATTCCACACCAAATCATCCATCACAAA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGTCTTTTGGGCAGGCGTaGTTTGTGATGGATGATTTG +
Preference number: 5 (lower is better)
Translates to: EMPYTTAGINYGELNYRKSFGQA*FVMDDL
Trigger: CAAATCATCCATCACAAACAACGCCTGCCCAAAAGA...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACCCATGTTTATTAGCTaGAAATGGATTTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAPMFIS*KWISTV
Trigger: CACGGTGGAAATCCATTTCAAGCTAATAAACATGGG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAAGAAGGATTTACAGATaGAGCCTCTTCGGAATCTGT +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHARRIYR*SLFGIC
Trigger: ACAGATTCCGAAGAGGCTCAATCTGTAAATCCTTCT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TCATCATCATCATCTTTGAACTCATACTCATCAAGGGCAGATGGAAGAGGTGTTAATCCACAAGAATGTTaGGGAGATTTACCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: SSSSSLNSYSSRADGRGVNPQEC*GDLPVE
Trigger: TTCCACTGGTAAATCTCCCAAACATTCTTGTGGATT...AACACCTCTTCCATCTGCCCTTGATGAGTATGAGTTCAAAGATGATGATGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CAA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCTCCTCTGCAGTTCTTaGGCACTATCCTTAGTTTTG +
Preference number: 5 (lower is better)
Translates to: EMPYTTAGINYGELNYRKLLCSS*ALSLVL
Trigger: CAAAACTAAGGATAGTGCCAAAGAACTGCAGAGGAG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAATCAAGTGCTTTTCTTaGCTTTCTGCTAGATGCCTC +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAIKCFS*LSARCL
Trigger: GAGGCATCTAGCAGAAAGCAAAGAAAAGCACTTGAT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAGCTGAGTTTTCTCTTTaGCTTGTAGTAAAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAAEFSL*LVVKRD
Trigger: GTCCCTCTTTACTACAAGCAAAAGAGAAAACTCAGC...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGATAGTACTGAGGTGCTaGAGGAATCACACTACACAG +
Preference number: 5 (lower is better)
Translates to: EMPYTTAGINYGELNYRKIVLRC*RNHTTQ
Trigger: CTGTGTAGTGTGATTCCTCAAGCACCTCAGTACTAT...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGGTGGGAATACAAATCTaGCTTAAGGGGTTTCCATCC +
Preference number: 5 (lower is better)
Translates to: EMPYTTAGINYGELNYRKVGIQI*LKGFPS
Trigger: GGATGGAAACCCCTTAAGCAAGATTTGTATTCCCAC...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGAGAGGCTCCAGCTTTTaGAGGTACCATTTAAGAGAG +
Preference number: 5 (lower is better)
Translates to: EMPYTTAGINYGELNYRKRGSSF*RYHLRE
Trigger: CTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCT...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TCATCATCATCATCTTTGAACTCATACTCATCAAGGGCAGATGGAAGAGGTGTTTTTTTGTATCATTCCTaGAGGGACTTTGACCAAGCA +
Preference number: 5 (lower is better)
Translates to: SSSSSLNSYSSRADGRGVFLYHS*RDFDQA
Trigger: TGCTTGGTCAAAGTCCCTCAAGGAATGATACAAAAA...AACACCTCTTCCATCTGCCCTTGATGAGTATGAGTTCAAAGATGATGATGATGA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CAA 90 bp CTCTTTCCAAAATTCTCTATCAAATTCCACACTCCTCTGCAGTTCTTTGGCACTAGAAGGATTTACAGATaGAGCCTCTTCGGAATTGAT +
Preference number: 5 (lower is better)
Translates to: LFPKFSIKFHTPLQFFGTRRIYR*SLFGID
Trigger: ATCAATTCCGAAGAGGCTCAATCTGTAAATCCTTCT...AGTGCCAAAGAACTGCAGAGGAGTGTGGAATTTGATAGAGAATTTTGGAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS TCA 90 bp TTGGGAGAAGGACTAGTATCTCCTGGCACAGTTAATAAGCTACCTTaGTTGCTCTCTTCTGATATTGTTTGGAATTGTTTGGTATGTTCA +
Preference number: 5 (lower is better)
Translates to: LGEGLVSPGTVNKLP*LLSSDIVWNCLVCS
Trigger: TGAACATACCAAACAATTCCAAACAATATCAGAAGAGAGCAATCAAGGTAGCTTATTAACTGTGCCAGGAGATACTAGTCCTTCTCCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS TCA 90 bp CAGCTCTGTAATGAACTCGCAAAACTTCTTGTTCGTTGGATACAATaGGTTTTTCCCTTTCAATACTGTGTTGCAAACGTAGTTTCATCC +
Preference number: 5 (lower is better)
Translates to: QLCNELAKLLVRWIQ*VFPFQYCVANVVSS
Trigger: GGATGAAACTACGTTTGCAACACAGTATTGAAAGGGAAAAACTCATTGTATCCAACGAACAAGAAGTTTTGCGAGTTCATTACAGAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTCCCATGTTTATTAGCTaGAAATGGATTTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVPMFIS*KWISTV
Trigger: CACGGTGGAAATCCATTTCAAGCTAATAAACATGGG...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CAA 90 bp CTCTTTCCAAAATTCTCTATCAAATTCCACACTCCTCTGCAGTTCTTTGGCACTATAGCAGCAGTATTTTaGCTCTTCTCACCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: LFPKFSIKFHTPLQFFGTIAAVF*LFSPSL
Trigger: TAAAGAAGGTGAGAAGAGCAAAAATACTGCTGCTAT...AGTGCCAAAGAACTGCAGAGGAGTGTGGAATTTGATAGAGAATTTTGGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CAA 90 bp TTTCTTTGCTTTCTGCTAGATGCCTCTCTTTTTCAGGCTTTTCTTTGTCATGTTATCAAGTGCTTTTCTTaGCTTTCTGCTAGATGCCTC +
Preference number: 5 (lower is better)
Translates to: FLCFLLDASLFQAFLCHVIKCFS*LSARCL
Trigger: GAGGCATCTAGCAGAAAGCAAAGAAAAGCACTTGAT...AACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CAA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGATCAAGTGCTTTTCTTaGCTTTCTGCTAGATGCCTC +
Preference number: 5 (lower is better)
Translates to: EMPYTTAGINYGELNYRKIKCFS*LSARCL
Trigger: GAGGCATCTAGCAGAAAGCAAAGAAAAGCACTTGAT...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATACAGCATCTTTAGGTaGTTTCTCCTTGGTATATGC +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAYSIFR*FLLGIC
Trigger: GCATATACCAAGGAGAAACAACCTAAAGATGCTGTA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTGTTTGAAGCTCCAGTaGGAGAAGTTGCAAAACTGG +
Preference number: 5 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNCLKLQ*EKLQNW
Trigger: CCAGTTTTGCAACTTCTCCAACTGGAGCTTCAAACA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGGCATTTCTGGTTGAGTaGACTGCTGTGAATGGTTTT +
Preference number: 5 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEAFLVE*TAVNGF
Trigger: AAAACCATTCACAGCAGTCAACTCAACCAGAAATGC...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACATAGTACTGAGGTGCTaGAGGAATCACACTACACAG +
Preference number: 5 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNIVLRC*RNHTTQ
Trigger: CTGTGTAGTGTGATTCCTCAAGCACCTCAGTACTAT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAACTAAATGGCAGTGTTaGATTTGCCAATGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHATKWQC*ICQCSC
Trigger: GCAAGAACATTGGCAAATCAAACACTGCCATTTAGT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTAAAAGCCTGTTCTGTTaGGGCCAACAGTGCTATTTC +
Preference number: 5 (lower is better)
Translates to: FVACLIQAILFYCALLYCKSLFC*GQQCYF
Trigger: GAAATAGCACTGTTGGCCCAAACAGAACAGGCTTTT...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGCAGGCACCGTCACGCTaGGCTAATTTTTGTATTTTT +
Preference number: 5 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEQAPSR*ANFCIF
Trigger: AAAAATACAAAAATTAGCCAAGCGTGACGGTGCCTG...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS TCA 90 bp GCCTCTTCGGAATTGATGATTTTTGTATCATTCCTTGAGGGACTTTaGCCAAGCAATAATTCAGGCACATTCACCATGTGGAAAATAAAT +
Preference number: 5 (lower is better)
Translates to: ASSELMIFVSFLEGL*PSNNSGTFTMWKIN
Trigger: ATTTATTTTCCACATGGTGAATGTGCCTGAATTATTGCTTGGTCAAAGTCCCTCAAGGAATGATACAAAAATCATCAATTCCGAAGAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS GCA 90 bp CTTTCATCTCCTTGCTCACATCACTTCGTTCAATTTTTGGAGTTTTaGTGTAGGATGCAATCTTGTCTTTACTCTTTCTTCCATATGGTT +
Preference number: 5 (lower is better)
Translates to: LSSPCSHHFVQFLEF*CRMQSCLYSFFHMV
Trigger: AACCATATGGAAGAAAGAGTAAAGACAAGATTGCATCCTACAGCAAAACTCCAAAAATTGAACGAAGTGATGTGAGCAAGGAGATGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262126.9
ENST00000400020.7
ENST00000540578.6
ENST00000546007.6
ENST00000581635.5
CDS GCA 90 bp CTGGTTGAGTTGACTGCTGTGAATGGTTTTCCAGACTTGATAAAATaGTTTGTTGAGATTCCTCATCTTCTATGGAAAGCAAACACTTTT +
Preference number: 5 (lower is better)
Translates to: LVELTAVNGFPDLIK*FVEIPHLLWKANTF
Trigger: AAAAGTGTTTGCTTTCCATAGAAGATGAGGAATCTCAACAAAGCATTTTATCAAGTCTGGAAAACCATTCACAGCAGTCAACTCAACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS GCA 90 bp TCTTGTTCGTTGGATACAATGAGTTTTTCCCTTTCAATACTGTGTTaGAAACGTAGTTTCATCCTTACAACTTCCTGTTGTCGAAAAAGC +
Preference number: 5 (lower is better)
Translates to: SCSLDTMSFSLSILC*KRSFILTTSCCRKS
Trigger: GCTTTTTCGACAACAGGAAGTTGTAAGGATGAAACTACGTTTGCAACACAGTATTGAAAGGGAAAAACTCATTGTATCCAACGAACAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CCA 90 bp TCGCTTATAATTAGTTTAACATCTTCTACAGAAGATGACCTAAGATaGGATGTTGAAAGTCTGTTTGCATATGGTGGTTTAATCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SLIISLTSSTEDDLR*DVESLFAYGGLIRS
Trigger: GGAGCGGATTAAACCACCATATGCAAACAGACTTTCAACATCCCATCTTAGGTCATCTTCTGTAGAAGATGTTAAACTAATTATAAGCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTTTCTCTTTCATCTCCTaGCTCACATCACTTCGTTCA +
Preference number: 5 (lower is better)
Translates to: FVACLIQAILFYCALLYCFSFIS*LTSLRS
Trigger: TGAACGAAGTGATGTGAGCAAGGAGATGAAAGAGAA...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACAGAAGGATTTACAGATaGAGCCTCTTCGGAATCTGT +
Preference number: 5 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNRRIYR*SLFGIC
Trigger: ACAGATTCCGAAGAGGCTCAATCTGTAAATCCTTCT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AGAGGTGTTTTACTGGGAAGTATCTGTTTACTTTCACAGATGAGAGAGTCTTTCTCATCATCATCATCTTaGAACTCATACTCATCAAGG +
Preference number: 5 (lower is better)
Translates to: RGVLLGSICLLSQMRESFSSSSS*NSYSSR
Trigger: CCTTGATGAGTATGAGTTCAAAGATGATGATGATGA...GAAAGACTCTCTCATCTGTGAAAGTAAACAGATACTTCCCAGTAAAACACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CAA 90 bp AGAGGTGTTTTACTGGGAAGTATCTGTTTACTTTCACAGATGAGAGAGTCTTTCGACACATGCTTTTCCTaGGTTGATTTATCATCTTTG +
Preference number: 5 (lower is better)
Translates to: RGVLLGSICLLSQMRESFDTCFS*VDLSSL
Trigger: CAAAGATGATAAATCAACCAAGGAAAAGCATGTGTC...GAAAGACTCTCTCATCTGTGAAAGTAAACAGATACTTCCCAGTAAAACACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCAATAGCAGCAGTATTTTaGCTCTTCTCACCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAIAAVF*LFSPSL
Trigger: TAAAGAAGGTGAGAAGAGCAAAAATACTGCTGCTAT...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp AGAGGTGTTTTACTGGGAAGTATCTGTTTACTTTCACAGATGAGAGAGTCTTTCTTTTCAGGCTTTTCTTaGTCATGTTTCCTATCCATC +
Preference number: 5 (lower is better)
Translates to: RGVLLGSICLLSQMRESFFSGFS*SCFLSI
Trigger: GATGGATAGGAAACATGACAAAGAAAAGCCTGAAAA...GAAAGACTCTCTCATCTGTGAAAGTAAACAGATACTTCCCAGTAAAACACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATTTTCAGGCTTTTCTTaGTCATGTTTCCTATCCATC +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAFSGFS*SCFLSI
Trigger: GATGGATAGGAAACATGACAAAGAAAAGCCTGAAAA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACAAACATACTTGCTGTTaGAAGCTCCAGTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNKHTCC*KLQLEK
Trigger: CTTCTCCAACTGGAGCTTCAAACAGCAAGTATGTTT...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACTCAGCTGAAACATACTaGCTGTTTGAAGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNSAETY*LFEAPV
Trigger: AACTGGAGCTTCAAACAGCAAGTATGTTTCAGCTGA...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACTGAAGAGAGGATTCTaGATCAGGTATGTTAGAATT +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHALKRGF*IRYVRI
Trigger: AATTCTAACATACCTGATCAAGAATCCTCTCTTCAG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACGATTTGCCAATGTTCTaGCAGCTCTGTAATGAACTC +
Preference number: 5 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNDLPMF*QLCNEL
Trigger: GAGTTCATTACAGAGCTGCAAGAACATTGGCAAATC...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATCATTCCTCACATATTaGCTTCACTTTTCTCTATCG +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHASFLTY*LHFSLS
Trigger: CGATAGAGAAAAGTGAAGCAAATATGTGAGGAATGA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATCACCAGATTCCTTCTaGTCGCTTTTATCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHASPDSF*SLLSSK
Trigger: TTTAGAAGATAAAAGCGACAAGAAGGAATCTGGTGA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCACATATTTCTGCAATTTaGCTAGCTGCCCAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAHISAI*LAAQVK
Trigger: TTTTACTTGGGCAGCTAGCAAAATTGCAGAAATATG...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp CCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCATGCATTTCAAAACATCATGTaGAGAAACAAGGCAGACAAG +
Preference number: 5 (lower is better)
Translates to: PYTTAGINYGELNYRKHAFQNIM*RNKADK
Trigger: CTTGTCTGCCTTGTTTCTCAACATGATGTTTTGAAA...TGCATGCTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTAATCCACAAGAATGTTaGGGAGATTTACCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: FVACLIQAILFYCALLYCNPQEC*GDLPVE
Trigger: TTCCACTGGTAAATCTCCCAAACATTCTTGTGGATT...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp AATAACTGTCTAATTGTTAAGTCCCATTCAAATGAGCTTCATGGGGTCTTTGAGTTTTCAGGCTTTTCTTaGTCATGTTTCCTATCCATC +
Preference number: 5 (lower is better)
Translates to: NNCLIVKSHSNELHGVFEFSGFS*SCFLSI
Trigger: GATGGATAGGAAACATGACAAAGAAAAGCCTGAAAA...CTCAAAGACCCCATGAAGCTCATTTGAATGGGACTTAACAATTAGACAGTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp TTTGTAGCATGTCTAATACAGGCAATCCTGTTCTATTGTGCTTTGCTTTATTGTTACAGCATCTTTAGGTaGTTTCTCCTTGGTATATGC +
Preference number: 5 (lower is better)
Translates to: FVACLIQAILFYCALLYCYSIFR*FLLGIC
Trigger: GCATATACCAAGGAGAAACAACCTAAAGATGCTGTA...ACAATAAAGCAAAGCACAATAGAACAGGATTGCCTGTATTAGACATGCTACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCTGAAGAGAGGATTCTaGATCAGGTATGTTAGAATT +
Preference number: 5 (lower is better)
Translates to: EMPYTTAGINYGELNYRKLKRGF*IRYVRI
Trigger: AATTCTAACATACCTGATCAAGAATCCTCTCTTCAG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp GAAATGCCTTACACTACTGCAGGCATCAATTATGGAGAGTTAAATTATAGGAAGCAGCATGTGCTCACTTaGTTACCATTTTTAGCAATA +
Preference number: 5 (lower is better)
Translates to: EMPYTTAGINYGELNYRKQHVLT*LPFLAI
Trigger: TATTGCTAAAAATGGTAACAAAGTGAGCACATGCTG...CTTCCTATAATTTAACTCTCCATAATTGATGCCTGCAGTAGTGTAAGGCATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS-3UTR CAA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACGACACATGCTTTTCCTaGGTTGATTTATCATCTTTG +
Preference number: 5 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNDTCFS*VDLSSL
Trigger: CAAAGATGATAAATCAACCAAGGAAAAGCATGTGTC...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACGTTTCTAGTCATTCTTaGAGGGATTTGGTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNVSSHS*RDLVFS
Trigger: ACTGAAAACCAAATCCCTCAAAGAATGACTAGAAAC...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS-3UTR CAA 90 bp TTTAAAAGTTTTCTACCTGTACACACTACTACTACACTCCATACAAACCACAACCTGTTCTATTGTGCTTaGCTTTATTGTGCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: FKSFLPVHTTTTLHTNHNLFYCA*LYCALY
Trigger: GTACAAAGCACAATAAAGCAAAGCACAATAGAACAG...GTTGTGGTTTGTATGGAGTGTAGTAGTAGTGTGTACAGGTAGAAAACTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262126.9
CDS GCA 72 bp CAAGGCCGGCGCAGGAGGCTTCACCCCCGGAACGAGTaGTTCGGCGTAGCCGTCGCTGTCGTTGTCTTCGTC +
Preference number: 6 (lower is better)
Translates to: QGRRRRLHPRNE*FGVAVAVVVFV
Trigger: GACGAAGACAACGACAGCGACGGCTACGCCGAAGCACTCGTTCCGGGGGTGAAGCCTCCTGCGCCGGCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262126.9
ENST00000540578.6
ENST00000577992.1
ENST00000581635.5
CDS CAA 72 bp CCGCTGCAGCCGCCTGTAAAGCCGCCGGAGCCGGGCTaGAAAACATCTCCGGTCTCGGTCCGTCTCTCACCA +
Preference number: 6 (lower is better)
Translates to: PLQPPVKPPEPG*KTSPVSVRLSP
Trigger: TGGTGAGAGACGGACCGAGACCGGAGATGTTTTCAAGCCCGGCTCCGGCGGCTTTACAGGCGGCTGCAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262126.9
ENST00000540578.6
ENST00000577992.1
CDS CAA 90 bp TCTTCGTCGCCGCTGCAGCCGCCTGTAAAGCCGCCGGAGCCGGGCTaGAAAACATCTCCGGTCTCGGTCCGTCTCTCACCACAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: SSSPLQPPVKPPEPG*KTSPVSVRLSPQPP
Trigger: AGGAGGCTGTGGTGAGAGACGGACCGAGACCGGAGATGTTTTCAAGCCCGGCTCCGGCGGCTTTACAGGCGGCTGCAGCGGCGACGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262126.9
ENST00000540578.6
ENST00000577992.1
CDS TCA 72 bp GGGTGGGTGGACGAGCGTGATCCAACTCAGGCAAAATaGCGCTGCGACCGCAGCCCGAGGACTAGGCGAAGT +
Preference number: 6 (lower is better)
Translates to: GWVDERDPTQAK*RCDRSPRTRRS
Trigger: ACTTCGCCTAGTCCTCGGGCTGCGGTCGCAGCGTCATTTTGCCTGAGTTGGATCACGCTCGTCCACCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585234.5
CDS TCA 72 bp CAAGGCTGCTGTGGAGGCATAAAGGATGCCGGATCCTaGGCACAAGAGTTTCCTGGCAGTTCAGTCTGGCGC +
Preference number: 6 (lower is better)
Translates to: QGCCGGIKDAGS*AQEFPGSSVWR
Trigger: GCGCCAGACTGAACTGCCAGGAAACTCTTGTGCTCAGGATCCGGCATCCTTTATGCCTCCACAGCAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS GCA 72 bp GGGGAAAGAGCAAGGCTGCTGTGGAGGCATAAAGGATaGCGGATCCTGAGCACAAGAGTTTCCTGGCAGTTC +
Preference number: 6 (lower is better)
Translates to: GERARLLWRHKG*RILSTRVSWQF
Trigger: GAACTGCCAGGAAACTCTTGTGCTCAGGATCCGGCATCCTTTATGCCTCCACAGCAGCCTTGCTCTTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS TCA 72 bp TGCTCCAGGGGTCTTGAAGCATCACAAGTGGGTACTTaGAAAACGATGACGGGAACTGCCTGTCCAATGCGG +
Preference number: 6 (lower is better)
Translates to: CSRGLEASQVGT*KTMTGTACPMR
Trigger: CCGCATTGGACAGGCAGTTCCCGTCATCGTTTTTCAAGTACCCACTTGTGATGCTTCAAGACCCCTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS TCA 72 bp TTTGCTTGTAGTAAAGAGGGACTCACTTGCACAGGCTaGGGTACACGTGACACTTTCCTTTTCCGTGGATGG +
Preference number: 6 (lower is better)
Translates to: FACSKEGLTCTG*GTRDTFLFRGW
Trigger: CCATCCACGGAAAAGGAAAGTGTCACGTGTACCTCAGCCTGTGCAAGTGAGTCCCTCTTTACTACAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS TCA 72 bp GTCTTGAAGCATCACAAGTGGGTACTTGAAAAACGATaGCGGGAACTGCCTGTCCAATGCGGCAAGGTTATT +
Preference number: 6 (lower is better)
Translates to: VLKHHKWVLEKR*RELPVQCGKVI
Trigger: AATAACCTTGCCGCATTGGACAGGCAGTTCCCGTCATCGTTTTTCAAGTACCCACTTGTGATGCTTCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS GCA 72 bp GGTGTGGAATCTGGACTGTTGTCTCTTGCTGTCATCTaGATAAGAAGTGCCATCTGTTTTCGCTCAGAGAGT +
Preference number: 6 (lower is better)
Translates to: GVESGLLSLAVI*IRSAICFRSES
Trigger: ACTCTCTGAGCGAAAACAGATGGCACTTCTTATGCAGATGACAGCAAGAGACAACAGTCCAGATTCCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262126.9
ENST00000400020.7
ENST00000540578.6
ENST00000581758.1
CDS GCA 72 bp ATCACAAGTGGGTACTTGAAAAACGATGACGGGAACTaGCTGTCCAATGCGGCAAGGTTATTTTACACTGGC +
Preference number: 6 (lower is better)
Translates to: ITSGYLKNDDGN*LSNAARLFYTG
Trigger: GCCAGTGTAAAATAACCTTGCCGCATTGGACAGGCAGTTCCCGTCATCGTTTTTCAAGTACCCACTTGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS CCA 72 bp TCAAGTTCCTGGAGTTTGAGCTGCCATTCTAACCTCTaGACAGCATTTAAAGCCGCAGCTTCATGTTGTTGC +
Preference number: 6 (lower is better)
Translates to: SSSWSLSCHSNL*TAFKAAASCCC
Trigger: GCAACAACATGAAGCTGCGGCTTTAAATGCTGTCCAGAGGTTAGAATGGCAGCTCAAACTCCAGGAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 90 bp CTTTCTGTCGAGATGAAGAACTGGGAGTTTTCTTTTGGGCAGGCGTaGTTTGTGATGGATGATTTGGTGTGGAATCTGGACTGTTGTCTC +
Preference number: 6 (lower is better)
Translates to: LSVEMKNWEFSFGQA*FVMDDLVWNLDCCL
Trigger: GAGACAACAGTCCAGATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAACTCCCAGTTCTTCATCTCGACAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262126.9
ENST00000400020.7
ENST00000540578.6
CDS TCA 72 bp GGAGTTTTCTTTTGGGCAGGCGTTGTTTGTGATGGATaGTTTGGTGTGGAATCTGGACTGTTGTCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: GVFFWAGVVCDG*FGVESGLLSLA
Trigger: AGCAAGAGACAACAGTCCAGATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262126.9
ENST00000400020.7
ENST00000540578.6
CDS TCA 72 bp AGAACTGGGAGTTTTCTTTTGGGCAGGCGTTGTTTGTaGTGGATGATTTGGTGTGGAATCTGGACTGTTGTC +
Preference number: 6 (lower is better)
Translates to: RTGSFLLGRRCL*WMIWCGIWTVV
Trigger: GACAACAGTCCAGATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAACTCCCAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262126.9
ENST00000400020.7
ENST00000540578.6
CDS CCA 72 bp TACTCAACTGGAGGCCTTGGGGTTGTCACTGTAGTATaGCAGGAATCTTCTGAACTAGCAACAGAAATCATG +
Preference number: 6 (lower is better)
Translates to: YSTGGLGVVTVV*QESSELATEIM
Trigger: CATGATTTCTGTTGCTAGTTCAGAAGATTCCTGCCATACTACAGTGACAACCCCAAGGCCTCCAGTTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CCA 72 bp GAACTGCCTGTCCAATGCGGCAAGGTTATTTTACACTaGCATTTAAGACAGAACTGTAGAGTGGCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: ELPVQCGKVILH*HLRQNCRVAAL
Trigger: AAGAGCAGCCACTCTACAGTTCTGTCTTAAATGCCAGTGTAAAATAACCTTGCCGCATTGGACAGGCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS CAA 72 bp GAGATGAAGAACTGGGAGTTTTCTTTTGGGCAGGCGTaGTTTGTGATGGATGATTTGGTGTGGAATCTGGAC +
Preference number: 6 (lower is better)
Translates to: EMKNWEFSFGQA*FVMDDLVWNLD
Trigger: GTCCAGATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAACTCCCAGTTCTTCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262126.9
ENST00000400020.7
ENST00000540578.6
CDS CAA 72 bp CTACAATGGCTGCCAGAGATTGCTGAGTTTTCTCTTTaGCTTGTAGTAAAGAGGGACTCACTTGCACAGGCT +
Preference number: 6 (lower is better)
Translates to: LQWLPEIAEFSL*LVVKRDSLAQA
Trigger: AGCCTGTGCAAGTGAGTCCCTCTTTACTACAAGCAAAAGAGAAAACTCAGCAATCTCTGGCAGCCATTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 72 bp TCCTGGATCTCTTTGTACAACCGTTTATTCAACGCTTaGGGATCTGTAAGGATGCGTCACTCCACATCACTC +
Preference number: 6 (lower is better)
Translates to: SWISLYNRLFNA*GSVRMRHSTSL
Trigger: GAGTGATGTGGAGTGACGCATCCTTACAGATCCCAAAGCGTTGAATAAACGGTTGTACAAAGAGATCCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400020.7
CDS CAA 72 bp TCAACTTGCTCCGCTGAGCTTGGCATTTCCTGCAAATaGGTAGCTGGATCCTGTGTAACTTTCATCATCATC +
Preference number: 6 (lower is better)
Translates to: STCSAELGISCK*VAGSCVTFIII
Trigger: GATGATGATGAAAGTTACACAGGATCCAGCTACCAATTTGCAGGAAATGCCAAGCTCAGCGGAGCAAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540578.6
CDS CAA 90 bp TTAGAGAATCTACAATGGCTGCCAGAGATTGCTGAGTTTTCTCTTTaGCTTGTAGTAAAGAGGGACTCACTTGCACAGGCTGAGGTACAC +
Preference number: 6 (lower is better)
Translates to: LENLQWLPEIAEFSL*LVVKRDSLAQAEVH
Trigger: GTGTACCTCAGCCTGTGCAAGTGAGTCCCTCTTTACTACAAGCAAAAGAGAAAACTCAGCAATCTCTGGCAGCCATTGTAGATTCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 90 bp CTTTCTGTCGAGATGAAGAACTGGGAGTTTTCTTTTGGGCAGGCGTaGTTTGTGATGGATGATTTGGTGTGGAATTGTTGTCTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: LSVEMKNWEFSFGQA*FVMDDLVWNCCLLL
Trigger: CAGCAAGAGACAACAATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAACTCCCAGTTCTTCATCTCGACAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546007.6
CDS TCA 72 bp CCTTGGGGTTGTCACTGTAGTATGGCAGGAATCTTCTaGACTAGCAACAGAAATCATGGATACAGATCTGGA +
Preference number: 6 (lower is better)
Translates to: PWGCHCSMAGIF*TSNRNHGYRSG
Trigger: TCCAGATCTGTATCCATGATTTCTGTTGCTAGTTCAGAAGATTCCTGCCATACTACAGTGACAACCCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS TCA 72 bp GGAGTTTTCTTTTGGGCAGGCGTTGTTTGTGATGGATaGTTTGGTGTGGAATTGTTGTCTCTTGCTGTCATC +
Preference number: 6 (lower is better)
Translates to: GVFFWAGVVCDG*FGVELLSLAVI
Trigger: GATGACAGCAAGAGACAACAATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546007.6
CDS TCA 72 bp AGAACTGGGAGTTTTCTTTTGGGCAGGCGTTGTTTGTaGTGGATGATTTGGTGTGGAATTGTTGTCTCTTGC +
Preference number: 6 (lower is better)
Translates to: RTGSFLLGRRCL*WMIWCGIVVSC
Trigger: GCAAGAGACAACAATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAACTCCCAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546007.6
CDS GCA 72 bp TGGATGATTTGGTGTGGAATCTGGACTGTTGTCTCTTaGTGTCATCTGCATAAGAAGTGCCATCTGTTTTCG +
Preference number: 6 (lower is better)
Translates to: WMIWCGIWTVVS*CHLHKKCHLFS
Trigger: CGAAAACAGATGGCACTTCTTATGCAGATGACAGCAAGAGACAACAGTCCAGATTCCACACCAAATCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262126.9
ENST00000400020.7
ENST00000540578.6
ENST00000581758.1
CDS GCA 72 bp TATAGTTCAACTTGCTCCGCTGAGCTTGGCATTTCCTaGAAATTGGTAGCTGGATCCTGTGTAACTTTCATC +
Preference number: 6 (lower is better)
Translates to: YSSTCSAELGIS*KLVAGSCVTFI
Trigger: GATGAAAGTTACACAGGATCCAGCTACCAATTTGCAGGAAATGCCAAGCTCAGCGGAGCAAGTTGAACTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540578.6
CDS CAA 72 bp AGGTCTCTTTCAGGCACATTTGAGAATACCTCAGGTTaGGGAGAAGGACTAGTATCTCCTGGCACAGTTAAT +
Preference number: 6 (lower is better)
Translates to: RSLSGTFENTSG*GEGLVSPGTVN
Trigger: ATTAACTGTGCCAGGAGATACTAGTCCTTCTCCCAAACCTGAGGTATTCTCAAATGTGCCTGAAAGAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS TCA 72 bp CAAGGCTGTTTGGCTTTCTCACAATCTGGAATTTGCTaGTTGCATACACTTGGTATAGTTCAACTTGCTCCG +
Preference number: 6 (lower is better)
Translates to: QGCLAFSQSGIC*LHTLGIVQLAP
Trigger: CGGAGCAAGTTGAACTATACCAAGTGTATGCAATCAGCAAATTCCAGATTGTGAGAAAGCCAAACAGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540578.6
CDS CAA 72 bp TTTTCTTTTGGGCAGGCGTTGTTTGTGATGGATGATTaGGTGTGGAATTGTTGTCTCTTGCTGTCATCTGCA +
Preference number: 6 (lower is better)
Translates to: FSFGQALFVMDD*VWNCCLLLSSA
Trigger: TGCAGATGACAGCAAGAGACAACAATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546007.6
CDS CAA 72 bp GAGATGAAGAACTGGGAGTTTTCTTTTGGGCAGGCGTaGTTTGTGATGGATGATTTGGTGTGGAATTGTTGT +
Preference number: 6 (lower is better)
Translates to: EMKNWEFSFGQA*FVMDDLVWNCC
Trigger: ACAACAATTCCACACCAAATCATCCATCACAAACAACGCCTGCCCAAAAGAAAACTCCCAGTTCTTCATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546007.6
CDS CAA 90 bp ACATTTGAAAGGTCTCTTTCAGGCACATTTGAGAATACCTCAGGTTaGGGAGAAGGACTAGTATCTCCTGGCACAGTTAATAAGCTACCT +
Preference number: 6 (lower is better)
Translates to: TFERSLSGTFENTSG*GEGLVSPGTVNKLP
Trigger: AGGTAGCTTATTAACTGTGCCAGGAGATACTAGTCCTTCTCCCAAACCTGAGGTATTCTCAAATGTGCCTGAAAGAGACCTTTCAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS GCA 72 bp AATTTGCTGATTGCATACACTTGGTATAGTTCAACTTaGTCCGCTGAGCTTGGCATTTCCTGCAAATTGGTA +
Preference number: 6 (lower is better)
Translates to: NLLIAYTWYSST*SAELGISCKLV
Trigger: TACCAATTTGCAGGAAATGCCAAGCTCAGCGGAGCAAGTTGAACTATACCAAGTGTATGCAATCAGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540578.6
CDS CCA 72 bp TTTCTCACAATCTGGAATTTGCTGATTGCATACACTTaGTATAGTTCAACTTGCTCCGCTGAGCTTGGCATT +
Preference number: 6 (lower is better)
Translates to: FLTIWNLLIAYT*YSSTCSAELGI
Trigger: AATGCCAAGCTCAGCGGAGCAAGTTGAACTATACCAAGTGTATGCAATCAGCAAATTCCAGATTGTGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540578.6
CDS CAA 90 bp ACTGGGGCAGTATTCTTGATGAGATTTCTATCAGCTGAAACATACTaGCTGTTTGAAGCTCCAGTTGGAGAAGTTGCAAAACTGGAATGT +
Preference number: 6 (lower is better)
Translates to: TGAVFLMRFLSAETY*LFEAPVGEVAKLEC
Trigger: ACATTCCAGTTTTGCAACTTCTCCAACTGGAGCTTCAAACAGCAAGTATGTTTCAGCTGATAGAAATCTCATCAAGAATACTGCCCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS GCA 72 bp CACCAGTTTAGGACAATACCATCAGGAAGTACTGACTaGTATATAGGAGTCAATTCAAAGTCGTCGTTAACA +
Preference number: 6 (lower is better)
Translates to: HQFRTIPSGSTD*YIGVNSKSSLT
Trigger: TGTTAACGACGACTTTGAATTGACTCCTATATAGCAGTCAGTACTTCCTGATGGTATTGTCCTAAACTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CCA 72 bp TTTACTATATCTCTGTGCCCACTACTAGCAGAATCATaGAGTGGAGTGTCATCATCTAATCCTTGTGTGTTA +
Preference number: 6 (lower is better)
Translates to: FTISLCPLLAES*SGVSSSNPCVL
Trigger: TAACACACAAGGATTAGATGATGACACTCCACTCCATGATTCTGCTAGTAGTGGGCACAGAGATATAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262126.9
ENST00000359158.7
ENST00000400020.7
ENST00000540578.6
ENST00000546007.6
CDS CAA 72 bp ATCCAGCAAAACAGTACAAGCACTAAATGGCAGTGTTaGATTTGCCAATGTTCTTGCAGCTCTGTAATGAAC +
Preference number: 6 (lower is better)
Translates to: IQQNSTSTKWQC*ICQCSCSSVMN
Trigger: GTTCATTACAGAGCTGCAAGAACATTGGCAAATCAAACACTGCCATTTAGTGCTTGTACTGTTTTGCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS TCA 72 bp GGACTAGTATCTCCTGGCACAGTTAATAAGCTACCTTaGTTGCTCTCTTCTGATATTGTTTGGAATTGTTTG +
Preference number: 6 (lower is better)
Translates to: GLVSPGTVNKLP*LLSSDIVWNCL
Trigger: CAAACAATTCCAAACAATATCAGAAGAGAGCAATCAAGGTAGCTTATTAACTGTGCCAGGAGATACTAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS TCA 72 bp GAATTGATGATTTTTGTATCATTCCTTGAGGGACTTTaGCCAAGCAATAATTCAGGCACATTCACCATGTGG +
Preference number: 6 (lower is better)
Translates to: ELMIFVSFLEGL*PSNNSGTFTMW
Trigger: CCACATGGTGAATGTGCCTGAATTATTGCTTGGTCAAAGTCCCTCAAGGAATGATACAAAAATCATCAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359158.7
CDS CCA 72 bp GTTAAAGAACCAAGGCTGTTTGGCTTTCTCACAATCTaGAATTTGCTGATTGCATACACTTGGTATAGTTCA +
Preference number: 6 (lower is better)
Translates to: VKEPRLFGFLTI*NLLIAYTWYSS
Trigger: TGAACTATACCAAGTGTATGCAATCAGCAAATTCCAGATTGTGAGAAAGCCAAACAGCCTTGGTTCTTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540578.6
CDS CAA 72 bp GATCTGTTACTTACAGCATCTTTAGGTTGTTTCTCCTaGGTATATGCATCAGTCACTTCTGAACTCTTTGAC +
Preference number: 6 (lower is better)
Translates to: DLLLTASLGCFS*VYASVTSELFD
Trigger: GTCAAAGAGTTCAGAAGTGACTGATGCATATACCAAGGAGAAACAACCTAAAGATGCTGTAAGTAACAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 72 bp CTGGTTGAGTTGACTGCTGTGAATGGTTTTCCAGACTaGATAAAATGCTTTGTTGAGATTCCTCATCTTCTA +
Preference number: 6 (lower is better)
Translates to: LVELTAVNGFPD*IKCFVEIPHLL
Trigger: TAGAAGATGAGGAATCTCAACAAAGCATTTTATCAAGTCTGGAAAACCATTCACAGCAGTCAACTCAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 90 bp ACAGATTGTGATCTGTTACTTACAGCATCTTTAGGTTGTTTCTCCTaGGTATATGCATCAGTCACTTCTGAACTCTTTGACCTAGTAAGT +
Preference number: 6 (lower is better)
Translates to: TDCDLLLTASLGCFS*VYASVTSELFDLVS
Trigger: ACTTACTAGGTCAAAGAGTTCAGAAGTGACTGATGCATATACCAAGGAGAAACAACCTAAAGATGCTGTAAGTAACAGATCACAATCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 90 bp CATCTTCTATGGAAAGCAAACACTTTTCACTTTCAGGACAATGTTTaGGATCTTGTTCATTTAGGTTTCCTTTTGGCATCCCTGCATTCA +
Preference number: 6 (lower is better)
Translates to: HLLWKANTFHFQDNV*DLVHLGFLLASLHS
Trigger: TGAATGCAGGGATGCCAAAAGGAAACCTAAATGAACAAGATCCAAAACATTGTCCTGAAAGTGAAAAGTGTTTGCTTTCCATAGAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 90 bp TATGCATTTCTGGTTGAGTTGACTGCTGTGAATGGTTTTCCAGACTaGATAAAATGCTTTGTTGAGATTCCTCATCTTCTATGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: YAFLVELTAVNGFPD*IKCFVEIPHLLWKA
Trigger: TGCTTTCCATAGAAGATGAGGAATCTCAACAAAGCATTTTATCAAGTCTGGAAAACCATTCACAGCAGTCAACTCAACCAGAAATGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 90 bp ATTTGCCAATGTTCTTGCAGCTCTGTAATGAACTCGCAAAACTTCTaGTTCGTTGGATACAATGAGTTTTTCCCTTTCAATACTGTGTTG +
Preference number: 6 (lower is better)
Translates to: ICQCSCSSVMNSQNF*FVGYNEFFPFNTVL
Trigger: CAACACAGTATTGAAAGGGAAAAACTCATTGTATCCAACGAACAAGAAGTTTTGCGAGTTCATTACAGAGCTGCAAGAACATTGGCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS GCA 72 bp TTGACTGCTGTGAATGGTTTTCCAGACTTGATAAAATaGTTTGTTGAGATTCCTCATCTTCTATGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: LTAVNGFPDLIK*FVEIPHLLWKA
Trigger: TGCTTTCCATAGAAGATGAGGAATCTCAACAAAGCATTTTATCAAGTCTGGAAAACCATTCACAGCAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 72 bp GTATTCTTGATGAGATTTCTATCAGCTGAAACATACTaGCTGTTTGAAGCTCCAGTTGGAGAAGTTGCAAAA +
Preference number: 6 (lower is better)
Translates to: VFLMRFLSAETY*LFEAPVGEVAK
Trigger: TTTTGCAACTTCTCCAACTGGAGCTTCAAACAGCAAGTATGTTTCAGCTGATAGAAATCTCATCAAGAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 72 bp TGGAAAGCAAACACTTTTCACTTTCAGGACAATGTTTaGGATCTTGTTCATTTAGGTTTCCTTTTGGCATCC +
Preference number: 6 (lower is better)
Translates to: WKANTFHFQDNV*DLVHLGFLLAS
Trigger: GGATGCCAAAAGGAAACCTAAATGAACAAGATCCAAAACATTGTCCTGAAAGTGAAAAGTGTTTGCTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 72 bp TGTTCTTGCAGCTCTGTAATGAACTCGCAAAACTTCTaGTTCGTTGGATACAATGAGTTTTTCCCTTTCAAT +
Preference number: 6 (lower is better)
Translates to: CSCSSVMNSQNF*FVGYNEFFPFN
Trigger: ATTGAAAGGGAAAAACTCATTGTATCCAACGAACAAGAAGTTTTGCGAGTTCATTACAGAGCTGCAAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS TCA 72 bp TCAAAATATGGATTTGCTCTCTCTGAACTGTATGGCTaGATCTCATCTAGTTTTAGAGAATCTACAATGGCT +
Preference number: 6 (lower is better)
Translates to: SKYGFALSELYG*ISSSFRESTMA
Trigger: AGCCATTGTAGATTCTCTAAAACTAGATGAGATTCAGCCATACAGTTCAGAGAGAGCAAATCCATATTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS TCA 72 bp AATGAACTCGCAAAACTTCTTGTTCGTTGGATACAATaGGTTTTTCCCTTTCAATACTGTGTTGCAAACGTA +
Preference number: 6 (lower is better)
Translates to: NELAKLLVRWIQ*VFPFQYCVANV
Trigger: TACGTTTGCAACACAGTATTGAAAGGGAAAAACTCATTGTATCCAACGAACAAGAAGTTTTGCGAGTTCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CAA 72 bp AGTTTACGTTTCATGGATGATTTCTCTTTCATCTCCTaGCTCACATCACTTCGTTCAATTTTTGGAGTTTTG +
Preference number: 6 (lower is better)
Translates to: SLRFMDDFSFIS*LTSLRSIFGVL
Trigger: CAAAACTCCAAAAATTGAACGAAGTGATGTGAGCAAGGAGATGAAAGAGAAATCATCCATGAAACGTAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262126.9
ENST00000400020.7
ENST00000540578.6
ENST00000546007.6
ENST00000581635.5
CDS TCA 72 bp TGTGAATGGTTTTCCAGACTTGATAAAATGCTTTGTTaGGATTCCTCATCTTCTATGGAAAGCAAACACTTT +
Preference number: 6 (lower is better)
Translates to: CEWFSRLDKMLC*DSSSSMESKHF
Trigger: AAAGTGTTTGCTTTCCATAGAAGATGAGGAATCTCAACAAAGCATTTTATCAAGTCTGGAAAACCATTCACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7
CDS CCA 72 bp ATTAGTTTAACATCTTCTACAGAAGATGACCTAAGATaGGATGTTGAAAGTCTGTTTGCATATGGTGGTTTA +
Preference number: 6 (lower is better)
Translates to: ISLTSSTEDDLR*DVESLFAYGGL
Trigger: TAAACCACCATATGCAAACAGACTTTCAACATCCCATCTTAGGTCATCTTCTGTAGAAGATGTTAAACTAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262126.9
ENST00000400020.7