RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD11 (Homo sapiens)

Ensembl gene IDs: ENSG00000167522

Ensembl transcript IDs: ENST00000301030.10, ENST00000330736.10, ENST00000378330.7, ENST00000378332.7, ENST00000562194.1, ENST00000562211.2, ENST00000562275.6, ENST00000562816.5, ENST00000563291.1, ENST00000566858.5, ENST00000566973.1, ENST00000567699.2, ENST00000567736.6, ENST00000568100.2, ENST00000568512.6, ENST00000568924.1, ENST00000613312.4, ENST00000623388.1, ENST00000642333.1, ENST00000642443.1, ENST00000642600.1, ENST00000642695.1, ENST00000643147.1, ENST00000643964.1, ENST00000644045.1, ENST00000644139.1, ENST00000644285.1, ENST00000644784.1, ENST00000645212.1, ENST00000645278.1, ENST00000645664.1, ENST00000645666.1, ENST00000645844.1, ENST00000646166.1, ENST00000646345.1, ENST00000646838.1, ENST00000646975.1, ENST00000647238.1, ENST00000647539.1

Found 1303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTCTGAGGTGGAGATGGCGGCGGGGACGGCGTCCACTCCGTCCTTaGCGTCCTCCAGCCCCGGCTCAGCGACGGGCAGAGCGTACGGGG +
Preference number: 1 (lower is better)
Translates to: PLRWRWRRGRRPLRP*RPPAPAQRRAERTG
Trigger: CCCCGTACGCTCTGCCCGTCGCTGAGCCGGGGCTGGAGGACGTCAAGGACGGAGTGGACGCCGTCCCCGCCGCCATCTCCACCTCAGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 90 bp GGCAGGCAGCTTCGGCCCATGGCGCTCCTGACGAGGGCTCCCTCGTaGCTGCCCCAGGACAAGCAGGACCCCGGCGGTCCTTTGGATCAG +
Preference number: 1 (lower is better)
Translates to: GRQLRPMALLTRAPS*LPQDKQDPGGPLDQ
Trigger: CTGATCCAAAGGACCGCCGGGGTCCTGCTTGTCCTGGGGCAGCCACGAGGGAGCCCTCGTCAGGAGCGCCATGGGCCGAAGCTGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568924.1
3UTR TCA 90 bp AACATCCACGTGCAGAGGGCAGGCAGCTTCGGCCCATGGCGCTCCTaGCGAGGGCTCCCTCGTGGCTGCCCCAGGACAAGCAGGACCCCG +
Preference number: 1 (lower is better)
Translates to: NIHVQRAGSFGPWRS*RGLPRGCPRTSRTP
Trigger: CGGGGTCCTGCTTGTCCTGGGGCAGCCACGAGGGAGCCCTCGTCAGGAGCGCCATGGGCCGAAGCTGCCTGCCCTCTGCACGTGGATGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568924.1
3UTR CCA 90 bp CTGAGGCCACTGGTCCACGGCACACTGCAGTGCACATGCCCTTCCTaGCCAGAGGCTCCCAGGGGCGCCATGCTCTCCAGGCACCTGCCC +
Preference number: 1 (lower is better)
Translates to: LRPLVHGTLQCTCPS*PEAPRGAMLSRHLP
Trigger: GGGCAGGTGCCTGGAGAGCATGGCGCCCCTGGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGTGGCCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR TCA 90 bp GGGGCTGTCAGGCACACCACGACCTCTCTCGACCCCCACAGAGGCTaGGACCTCTCAGTGCCCACTGCTCCTGGGCCGGCCACAATGGCC +
Preference number: 1 (lower is better)
Translates to: GAVRHTTTSLDPHRG*DLSVPTAPGPATMA
Trigger: GGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
3UTR GCA 90 bp CTCGTGCAGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCG +
Preference number: 1 (lower is better)
Translates to: LVQRRPACEVLDVDV*PLADELFDAPGVPA
Trigger: CGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCTGCACGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR CCA 90 bp CCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTTaGGGCCGGGACATGGCAGGTGCCTTCCCACTCCTTGCTGCACCC +
Preference number: 1 (lower is better)
Translates to: PRASWSERARWAELS*GRDMAGAFPLLAAP
Trigger: GGGTGCAGCAAGGAGTGGGAAGGCACCTGCCATGTCCCGGCCCCAAGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
3UTR GCA 90 bp CACACTGAGCTGAGGCCACTGGTCCACGGCACACTGCAGTGCACATaGCCTTCCTGGCCAGAGGCTCCCAGGGGCGCCATGCTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: HTELRPLVHGTLQCT*PSWPEAPRGAMLSR
Trigger: CCTGGAGAGCATGGCGCCCCTGGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGTGGCCTCAGCTCAGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR CCA 90 bp AGATGGGCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTaGGCAGAGCTGTCTTGGGGCCGGGACATGGCAGGTGCCTTCCCA +
Preference number: 1 (lower is better)
Translates to: RWARSPRASWSERAR*AELSWGRDMAGAFP
Trigger: TGGGAAGGCACCTGCCATGTCCCGGCCCCAAGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGCCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644045.1
3UTR TCA 90 bp TCCCGAGGCAGCTCAGCGGTTCTGGGATTCCGTGGTCGGCAATGGTaGGAGACCGTCTGCAGAAGGGGCCCTTTCTCTGACACGCCTGCC +
Preference number: 1 (lower is better)
Translates to: SRGSSAVLGFRGRQW*ETVCRRGPFSDTPA
Trigger: GGCAGGCGTGTCAGAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATCCCAGAACCGCTGAGCTGCCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR GCA 90 bp GGGGAGTTGGCCACTTTCAGCGGCGTCTCGCCTTTCCTGTTGCTCTaGTGCGGGTTCCCTCCGTACCGCAGCAGCAGCTTCACCACCTTG +
Preference number: 1 (lower is better)
Translates to: GELATFSGVSPFLLL*CGFPPYRSSSFTTL
Trigger: CAAGGTGGTGAAGCTGCTGCTGCGGTACGGAGGGAACCCGCAGCAGAGCAACAGGAAAGGCGAGACGCCGCTGAAAGTGGCCAACTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR GCA 90 bp GATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTaGTTTCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCT +
Preference number: 1 (lower is better)
Translates to: DEDISETRRISRQHP*FPAGRGCQAHHDLS
Trigger: AGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR TCA 90 bp CCCTGCTGCACTCTGCTCTCTCTGCCCGCTCGGGTCCACTGCAGCTaGGCGGGTGGGAGAAGCCTCTTCAACTTCACACACTTGTCGCCT +
Preference number: 1 (lower is better)
Translates to: PCCTLLSLPARVHCS*AGGRSLFNFTHLSP
Trigger: AGGCGACAAGTGTGTGAAGTTGAAGAGGCTTCTCCCACCCGCTCAGCTGCAGTGGACCCGAGCGGGCAGAGAGAGCAGAGTGCAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR TCA 90 bp CCCCACACACGTGAGTGCCTTGGGACCCTCGTCAACACACTGAGCTaGGGCCACTGGTCCACGGCACACTGCAGTGCACATGCCCTTCCT +
Preference number: 1 (lower is better)
Translates to: PHTRECLGTLVNTLS*GHWSTAHCSAHALP
Trigger: AGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGTGGCCTCAGCTCAGTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR TCA 90 bp TGGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTTCTCTaGCACGCCTGCCACTGTGCTCACTGGTGCAGCCAAAGGGACACG +
Preference number: 1 (lower is better)
Translates to: WSAMVRDRLQKGPFL*HACHCAHWCSQRDT
Trigger: CGTGTCCCTTTGGCTGCACCAGTGAGCACAGTGGCAGGCGTGTCAGAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR TCA 90 bp AACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCAACACACTaGGCTGAGGCCACTGGTCCACGGCACACTGCAGTGCACATGCCC +
Preference number: 1 (lower is better)
Translates to: NIPTHVSALGPSSTH*AEATGPRHTAVHMP
Trigger: GGGCATGTGCACTGCAGTGTGCCGTGGACCAGTGGCCTCAGCTCAGTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR GCA 90 bp ATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCT +
Preference number: 1 (lower is better)
Translates to: MSSLMRRASPRMAAR*RRVSPRSFLLFTLS
Trigger: AGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR GCA 90 bp AGACCGTCTGCAGAAGGGGCCCTTTCTCTGACACGCCTGCCACTGTaGTCACTGGTGCAGCCAAAGGGACACGCACAAGCCGTCAGGTCA +
Preference number: 1 (lower is better)
Translates to: RPSAEGALSLTRLPL*SLVQPKGHAQAVRS
Trigger: TGACCTGACGGCTTGTGCGTGTCCCTTTGGCTGCACCAGTGAGCACAGTGGCAGGCGTGTCAGAGAAAGGGCCCCTTCTGCAGACGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR GCA 90 bp AGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTaGTGGCAGAATTCAGTTTCTTGCAGGGCTGGGACGGAGGTCCCC +
Preference number: 1 (lower is better)
Translates to: RCWQGRILPFLHHGG*WQNSVSCRAGTEVP
Trigger: GGGGACCTCCGTCCCAGCCCTGCAAGAAACTGAATTCTGCCAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR CCA 90 bp ACCTGCTGGTTCTTCCCGAGGCAGCTCAGCGGTTCTGGGATTCCGTaGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTTCTC +
Preference number: 1 (lower is better)
Translates to: TCWFFPRQLSGSGIP*SAMVRDRLQKGPFL
Trigger: GAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATCCCAGAACCGCTGAGCTGCCTCGGGAAGAACCAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR TCA 90 bp TGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGTaGGTGCCTTGGGACCCTCGTCAACACACTGAGCTGAGGCCACTG +
Preference number: 1 (lower is better)
Translates to: CIRASRRVLLTSPHT*VPWDPRQHTELRPL
Trigger: CAGTGGCCTCAGCTCAGTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR GCA 90 bp CCCGGCGGTCCTTTGGATCAGAACACACTCAACGATGCAGACACCTaGTGGTTCTTCCCGAGGCAGCTCAGCGGTTCTGGGATTCCGTGG +
Preference number: 1 (lower is better)
Translates to: PGGPLDQNTLNDADT*WFFPRQLSGSGIPW
Trigger: CCACGGAATCCCAGAACCGCTGAGCTGCCTCGGGAAGAACCAGCAGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGGACCGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568924.1
3UTR GCA 90 bp CAAGCAGGACCCCGGCGGTCCTTTGGATCAGAACACACTCAACGATaGAGACACCTGCTGGTTCTTCCCGAGGCAGCTCAGCGGTTCTGG +
Preference number: 1 (lower is better)
Translates to: QAGPRRSFGSEHTQR*RHLLVLPEAAQRFW
Trigger: CCAGAACCGCTGAGCTGCCTCGGGAAGAACCAGCAGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGGACCGCCGGGGTCCTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568924.1
3UTR GCA 90 bp CATCCTCCGGCAGGACCCAAGTCCTCTGTATTCAGAGGCCGACCCTaGTTTCCAGAGACTCACGAGGTGGCAGAGAGTCAGGCTGTGGCA +
Preference number: 1 (lower is better)
Translates to: HPPAGPKSSVFRGRP*FPETHEVAESQAVA
Trigger: TGCCACAGCCTGACTCTCTGCCACCTCGTGAGTCTCTGGAAAGCAGGGTCGGCCTCTGAATACAGAGGACTTGGGTCCTGCCGGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
3UTR CCA 90 bp GAGGTCAAGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATaGGGGCTTGTAGTGCCCGTTGTTGGCAGCGTCGTGCAAAGGCGT +
Preference number: 1 (lower is better)
Translates to: EVKVLAGQDPSFPPS*GLVVPVVGSVVQRR
Trigger: ACGCCTTTGCACGACGCTGCCAACAACGGGCACTACAAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR CCA 90 bp TGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTGCTaGCAGAATTCAGTTTCTTGCAGGGCTGGGACGGAGGTCCCCAGT +
Preference number: 1 (lower is better)
Translates to: CWQGRILPFLHHGGC*QNSVSCRAGTEVPS
Trigger: ACTGGGGACCTCCGTCCCAGCCCTGCAAGAAACTGAATTCTGCCAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR CCA 90 bp ACTGAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTaGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGACCAGGGT +
Preference number: 1 (lower is better)
Translates to: TEGAKHLTLKEPACA*QHCREHTPGTRDQG
Trigger: ACCCTGGTCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
3UTR CCA 90 bp CACTCTGCTCTCTCTGCCCGCTCGGGTCCACTGCAGCTGAGCGGGTaGGAGAAGCCTCTTCAACTTCACACACTTGTCGCCTCTAGCACT +
Preference number: 1 (lower is better)
Translates to: HSALSARSGPLQLSG*EKPLQLHTLVASST
Trigger: AGTGCTAGAGGCGACAAGTGTGTGAAGTTGAAGAGGCTTCTCCCACCCGCTCAGCTGCAGTGGACCCGAGCGGGCAGAGAGAGCAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR TCA 90 bp CTCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATaGCCTAGGACAATCTCCCCATGTGAGGCACTCACAAGGTCTGGG +
Preference number: 1 (lower is better)
Translates to: LSSFKGPWGCPGPAR*PRTISPCEALTRSG
Trigger: CCCAGACCTTGTGAGTGCCTCACATGGGGAGATTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR CCA 90 bp GAGGTCAAGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATaGGGGCTGCTGGCAGAATTCAGTTTCTTGCAGGGCTGGGACGGA +
Preference number: 1 (lower is better)
Translates to: EVKVLAGQDPSFPPS*GLLAEFSFLQGWDG
Trigger: TCCGTCCCAGCCCTGCAAGAAACTGAATTCTGCCAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR GCA 90 bp CCTCTTCTGAGCTCTCCGTCGAGCTCTCCTCGCTGGAAGTGTAAGTaGCTTTGCCTAACAGGAGGTTCACCATCGTGGGGGAGTTGGCCA +
Preference number: 1 (lower is better)
Translates to: PLLSSPSSSPRWKCK*LCLTGGSPSWGSWP
Trigger: TGGCCAACTCCCCCACGATGGTGAACCTCCTGTTAGGCAAAGGCACTTACACTTCCAGCGAGGAGAGCTCGACGGAGAGCTCAGAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 90 bp TGTAAGTGCCTTTGCCTAACAGGAGGTTCACCATCGTGGGGGAGTTaGCCACTTTCAGCGGCGTCTCGCCTTTCCTGTTGCTCTGCTGCG +
Preference number: 1 (lower is better)
Translates to: CKCLCLTGGSPSWGS*PLSAASRLSCCSAA
Trigger: CGCAGCAGAGCAACAGGAAAGGCGAGACGCCGCTGAAAGTGGCCAACTCCCCCACGATGGTGAACCTCCTGTTAGGCAAAGGCACTTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 90 bp CGCTGGAAGTGTAAGTGCCTTTGCCTAACAGGAGGTTCACCATCGTaGGGGAGTTGGCCACTTTCAGCGGCGTCTCGCCTTTCCTGTTGC +
Preference number: 1 (lower is better)
Translates to: RWKCKCLCLTGGSPS*GSWPLSAASRLSCC
Trigger: GCAACAGGAAAGGCGAGACGCCGCTGAAAGTGGCCAACTCCCCCACGATGGTGAACCTCCTGTTAGGCAAAGGCACTTACACTTCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR GCA 90 bp CTGAGCTCTCCGTCGAGCTCTCCTCGCTGGAAGTGTAAGTGCCTTTaGCTAACAGGAGGTTCACCATCGTGGGGGAGTTGGCCACTTTCA +
Preference number: 1 (lower is better)
Translates to: LSSPSSSPRWKCKCL*LTGGSPSWGSWPLS
Trigger: TGAAAGTGGCCAACTCCCCCACGATGGTGAACCTCCTGTTAGGCAAAGGCACTTACACTTCCAGCGAGGAGAGCTCGACGGAGAGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR GCA 90 bp GCCAAAGGGACACGCACAAGCCGTCAGGTCAGCGCGGCATCAGGATaGACTGCAGAGTTGTGGGCTCCATTTCCATCTTCCACGTATATG +
Preference number: 1 (lower is better)
Translates to: AKGTRTSRQVSAASG*TAELWAPFPSSTYM
Trigger: CATATACGTGGAAGATGGAAATGGAGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCTGACCTGACGGCTTGTGCGTGTCCCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR CCA 90 bp GGCCTTTTTCGAACTCGGAGTCCGTGTTGTTGCCGTCGACTGAACTaGAAGGTGCGAAGGATGGTGCGTCTTCCTCTTCTGAGCTCTCCG +
Preference number: 1 (lower is better)
Translates to: GLFRTRSPCCCRRLN*KVRRMVRLPLLSSP
Trigger: CGGAGAGCTCAGAAGAGGAAGACGCACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 90 bp AAACTCATACTCGTCCTTGACGGGGGCCGTGGCCTTCTGTGGCTCTaGGTTCTTGGCCTTGTGCTTGAGGCCTTTTTCGAACTCGGAGTC +
Preference number: 1 (lower is better)
Translates to: KLILVLDGGRGLLWL*VLGLVLEAFFELGV
Trigger: GACTCCGAGTTCGAAAAAGGCCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCACGGCCCCCGTCAAGGACGAGTATGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 90 bp ACCTACACGGCTAGCGGATACGAGCCTTTCATAGATGGCACTTGCTaGGAAACCTGTGAGAGGCCGTCCAGGCTGACCCAGAAGGGGAAA +
Preference number: 1 (lower is better)
Translates to: TYTASGYEPFIDGTC*ETCERPSRLTQKGK
Trigger: TTTCCCCTTCTGGGTCAGCCTGGACGGCCTCTCACAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCGTATCCGCTAGCCGTGTAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR TCA 90 bp TGCCCACTGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCT +
Preference number: 1 (lower is better)
Translates to: CPLLLGRPQWPLSKA*VYGSVHWPHLLVLP
Trigger: AGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
3UTR GCA 90 bp TCCTTTTTCAATAGGTGCTTGTCGTCCACCGGAGGAACCCTGTCCTaGTCGTCGTCCTCATCAAACTCATACTCGTCCTTGACGGGGGCC +
Preference number: 1 (lower is better)
Translates to: SFFNRCLSSTGGTLS*SSSSSNSYSSLTGA
Trigger: GGCCCCCGTCAAGGACGAGTATGAGTTTGATGAGGACGACGAGCAGGACAGGGTTCCTCCGGTGGACGACAAGCACCTATTGAAAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 90 bp CTCATCAAACTCATACTCGTCCTTGACGGGGGCCGTGGCCTTCTGTaGCTCTGGGTTCTTGGCCTTGTGCTTGAGGCCTTTTTCGAACTC +
Preference number: 1 (lower is better)
Translates to: LIKLILVLDGGRGLL*LWVLGLVLEAFFEL
Trigger: GAGTTCGAAAAAGGCCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCACGGCCCCCGTCAAGGACGAGTATGAGTTTGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 90 bp AAGTCCCACAGATACCAGTGGCTAAGTCTGTCTTCCCTCCAGGAATaGGGAAGCAGGAGCCGTCAGAACAGCCGTCTCCTATCTGAGGCA +
Preference number: 1 (lower is better)
Translates to: KSHRYQWLSLSSLQE*GSRSRQNSRLLSEA
Trigger: TGCCTCAGATAGGAGACGGCTGTTCTGACGGCTCCTGCTTCCCCATTCCTGGAGGGAAGACAGACTTAGCCACTGGTATCTGTGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR CCA 90 bp GCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTaGCTAAGTCTGTCTTCCCTCCAGGAATGGGGAAGCAGGAGCCGT +
Preference number: 1 (lower is better)
Translates to: ARSGIQSSKKSHRYQ*LSLSSLQEWGSRSR
Trigger: ACGGCTCCTGCTTCCCCATTCCTGGAGGGAAGACAGACTTAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR TCA 90 bp GCCGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATaGCGTCAGGAAAAGACTGAAGGTGCCAAGCACCTAACGCTGAAG +
Preference number: 1 (lower is better)
Translates to: AVRTAVSYLRHQEQT*RQEKTEGAKHLTLK
Trigger: CTTCAGCGTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
3UTR GCA 90 bp GCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTaGACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGT +
Preference number: 1 (lower is better)
Translates to: AGHNGHFLKLESMVL*TGHTSWCYLIPDEG
Trigger: ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
3UTR GCA 90 bp TATCTTTATCCTTTGGATCAGAACACACTCAACGATGCAGACACCTaGTGGTTCTTCCCGAGGCAGCTCAGCGGTTCTGGGATTCCGTGG +
Preference number: 1 (lower is better)
Translates to: YLYPLDQNTLNDADT*WFFPRQLSGSGIPW
Trigger: CCACGGAATCCCAGAACCGCTGAGCTGCCTCGGGAAGAACCAGCAGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGGATAAAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR CCA 90 bp CCTTGTAATCTTCGCCCTTCTCTTTCTTCTCGGCCTTCTCTTTCTTaGCTCGCTCTCGGTCGTGGCTCTTCTTGGATGAAGATGAGGAGT +
Preference number: 1 (lower is better)
Translates to: PCNLRPSLSSRPSLS*LALGRGSSWMKMRS
Trigger: ACTCCTCATCTTCATCCAAGAAGAGCCACGACCGAGAGCGAGCCAAGAAAGAGAAGGCCGAGAAGAAAGAGAAGGGCGAAGATTACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 90 bp CTCTTCAACTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTaGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTAAG +
Preference number: 1 (lower is better)
Translates to: LFNFTHLSPLALGKV*HSEFQEVPQIPVAK
Trigger: CTTAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR GCA 90 bp AGAGAAACTTTATCTTTATCCTTTGGATCAGAACACACTCAACGATaGAGACACCTGCTGGTTCTTCCCGAGGCAGCTCAGCGGTTCTGG +
Preference number: 1 (lower is better)
Translates to: RETLSLSFGSEHTQR*RHLLVLPEAAQRFW
Trigger: CCAGAACCGCTGAGCTGCCTCGGGAAGAACCAGCAGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGGATAAAGATAAAGTTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR TCA 90 bp ACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTaGCATGTTCTATTGTTGAATCAGTACAGAGTTCTTATGTGTGTG +
Preference number: 1 (lower is better)
Translates to: TIDSCRPQNQFPVRV*HVLLLNQYRVLMCV
Trigger: CACACACATAAGAACTCTGTACTGATTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp TTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 2 (lower is better)
Translates to: FDAPGVPADGGSVQAGLSRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...GGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR GCA 90 bp TTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 2 (lower is better)
Translates to: FDAPGVPADGGSVQAGLSRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...GGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR GCA 90 bp ACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 2 (lower is better)
Translates to: TRRISRQHPCFPAGRGCQRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...CTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 2 (lower is better)
Translates to: ADELFDAPGVPADGGSVQRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR TCA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTGGCACAGCTCGGCCTTaGGGGTGGGCAAGGCGAAAA +
Preference number: 2 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGGTARP*GWARRK
Trigger: TTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCC...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR CAA 90 bp GCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGG +
Preference number: 2 (lower is better)
Translates to: AKSLTLTSAPSLMSS*MRRASPRMAARCRR
Trigger: CCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR TCA 90 bp TCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 2 (lower is better)
Translates to: SPRMAARCRRVSPRSFLLHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...CAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR-3UTR GCA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CCA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCGGGCACCAGCAGATGTaGCCCCGTGTGACCCCTCAG +
Preference number: 2 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSGHQQM*PRVTPQ
Trigger: CTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCC...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR TCA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGAGAGGCCGTCCAGGCTaGCCCAGAAGGGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: ADELFDAPGVPADGGSVQRGRPG*PRRGKL
Trigger: CAGCTTTCCCCTTCTGGGTCAGCCTGGACGGCCTCT...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR TCA 90 bp TCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGAGAGGCCGTCCAGGCTaGCCCAGAAGGGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: SPRMAARCRRVSPRSFLLRGRPG*PRRGKL
Trigger: CAGCTTTCCCCTTCTGGGTCAGCCTGGACGGCCTCT...CAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGGTTCACCTCCGCACCTaGAGCCAGCAGCTGCTTCGC +
Preference number: 2 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQVHLRT*SQQLLR
Trigger: GCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTGAAC...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CCA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGTGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: ADELFDAPGVPADGGSVQCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CCA 90 bp CTTGCTGCAGAGGAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTAGTGCCCACTGCTCCTaGGCCGGCCACAATGGCCAC +
Preference number: 2 (lower is better)
Translates to: LAAEEHDGHQQMWPRVTPSAHCS*AGHNGH
Trigger: GTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT...AGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTCCTCTGCAGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp CAGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATATGAGAAGGGCCACCTaGTGGCGCTCGGAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: QRRPACEVLDVDVCPLADMRRAT*WRSERG
Trigger: CCCCCTCTCCGAGCGCCAGCAGGTGGCCCTTCTCAT...ATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp CTTGCTGCAGAGGAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCCTCTCAGTGCCCACTaGTCCTGGGCCGGCCACAAT +
Preference number: 2 (lower is better)
Translates to: LAAEEHDGHQQMWPRVTPPLSAH*SWAGHN
Trigger: ATTGTGGCCGGCCCAGGAGCAGTGGGCACTGAGAGG...AGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTCCTCTGCAGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp CTTGCTGCAGAGGAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCCTTGCTGTCCTGCCTaGAACCAGGGGCTCTCCACG +
Preference number: 2 (lower is better)
Translates to: LAAEEHDGHQQMWPRVTPPCCPA*NQGLST
Trigger: CGTGGAGAGCCCCTGGTTGCAGGCAGGACAGCAAGG...AGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTCCTCTGCAGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp CCACTGGTCCACGGCACACTGCAGTGCACATGCCCTTCCTGGCCAGAGGCTCCCGCACAGCCTGGCCCCTaGTGCACTCTGCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: PLVHGTLQCTCPSWPEAPAQPGP*CTLLSL
Trigger: CAGAGAGAGCAGAGTGCAGCAGGGGCCAGGCTGTGC...GGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR GCA 90 bp CCACTGGCCAAGCATCCTCCGGCAGGACCCAAGTCCTCTGTATTCAGAGGCCGACTCCCAGGGGCGCCATaGTCTCCAGGCACCTGCCCC +
Preference number: 2 (lower is better)
Translates to: PLAKHPPAGPKSSVFRGRLPGAP*SPGTCP
Trigger: GGGGCAGGTGCCTGGAGAGCATGGCGCCCCTGGGAG...TCGGCCTCTGAATACAGAGGACTTGGGTCCTGCCGGAGGATGCTTGGCCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
3UTR-3UTR CCA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCCAGAGGTCAAGGTGCTaGCAGGGCAGGATCCTTCCT +
Preference number: 2 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSQRSRC*QGRILP
Trigger: AGGAAGGATCCTGCCCTGCCAGCACCTTGACCTCTG...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp CACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: HDGHQQMWPRVTPQPCCPSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...AGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGCGGAGTCCGTGTTGTTaGCGTCGACTGAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: ADELFDAPGVPADGGSVQRSPCC*RRLNWK
Trigger: CTTCCAGTTCAGTCGACGGCAACAACACGGACTCCG...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR-3UTR GCA 90 bp GTCAAGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTGCTGGGCCAGCAGCGCAGGTaGGGCCCTCCTCGGGTTCTA +
Preference number: 2 (lower is better)
Translates to: VKVLAGQDPSFPPSWGLLGQQRR*GPPRVL
Trigger: TAGAACCCGAGGAGGGCCGCACCTGCGCTGCTGGCC...CAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGTGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCG +
Preference number: 2 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQCSARC*QRRAKA
Trigger: CGCCTTTGCACGACGCTGCCAACAACGGGCACTACA...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CCA 90 bp TCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTGCCACTGTGCTCACTaGTGCAGCCAAAGGGACACG +
Preference number: 2 (lower is better)
Translates to: SPRMAARCRRVSPRSFLLCHCAH*CSQRDT
Trigger: CGTGTCCCTTTGGCTGCACCAGTGAGCACAGTGGCA...CAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR-3UTR TCA 90 bp CTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTTTGCTGGGAAACCTGTaGGAGGCCGTCCAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: LQPAAASRRRSSPGYRPRLLGNL*EAVQAD
Trigger: GTCAGCCTGGACGGCCTCTCACAGGTTTCCCAGCAA...ACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp GGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGCCCTTCCGCTCAGGGCCCTaGTTCTCTTTCTTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: GHLLALGEGVAGSDSRQPFRSGP*FSFFLL
Trigger: AAGCAAGAAGAAAGAGAAGCAGGGCCCTGAGCGGAA...GGGCTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp GCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTTTCCGCTCAGGGCCCTaGTTCTCTTTCTTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: APSLMSSLMRRASPRMAAFRSGP*FSFFLL
Trigger: AAGCAAGAAGAAAGAGAAGCAGGGCCCTGAGCGGAA...AGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp CAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 2 (lower is better)
Translates to: QQLLRDVVVAPVTGLVQRLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...GCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR GCA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 2 (lower is better)
Translates to: EVLDVDVCPLADELFDAPRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR GCA 90 bp CAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCTCTCGCCTTTCCTGTTaGTCTGCTGCGGGTTCCCTC +
Preference number: 2 (lower is better)
Translates to: QQLLRDVVVAPVTGLVQRSRLSC*SAAGSL
Trigger: GAGGGAACCCGCAGCAGAGCAACAGGAAAGGCGAGA...GCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR-3UTR GCA 90 bp GGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGATGTGCCTGGCAGCACTaGAGAGAGCACACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: GTSMCLAALQRAHPRHQRCAWQH*REHTPG
Trigger: GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACA...TCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR GCA 90 bp GGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGAGCACAGCCTGGCCCCTaGTGCACTCTGCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: GTSMCLAALQRAHPRHQRAQPGP*CTLLSL
Trigger: CAGAGAGAGCAGAGTGCAGCAGGGGCCAGGCTGTGC...TCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR GCA 90 bp AGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTTGGCCGGGACATGGCAGGTaGCTTCCCACTCCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: RSPRASWSERARWAELSWPGHGR*LPTPCC
Trigger: GCAGCAAGGAGTGGGAAGGCACCTGCCATGTCCCGG...CCAAGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
3UTR CAA 90 bp CCCGCGTCGGCAGCCCCTCGGTCCTTTCTCCTGTCTCTGGGCTCCTaGTCCTTCTGCCTCTCAGGGTGCTGCTTGTCAGAAGACTTCCTG +
Preference number: 2 (lower is better)
Translates to: PASAAPRSFLLSLGS*SFCLSGCCLSEDFL
Trigger: CAGGAAGTCTTCTGACAAGCAGCACCCTGAGAGGCAGAAGGACAAGGAGCCCAGAGACAGGAGAAAGGACCGAGGGGCTGCCGACGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR-3UTR TCA 90 bp TTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCTTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 2 (lower is better)
Translates to: FDAPGVPADGGSVQAGLSFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...GGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR TCA 90 bp GTCAAGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTGCTGGGCACAGCTCGGCCTTaGGGGTGGGCAAGGCGAAAA +
Preference number: 2 (lower is better)
Translates to: VKVLAGQDPSFPPSWGLLGTARP*GWARRK
Trigger: TTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCC...CAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCTTCCGCTCAGGGCCCTaGTTCTCTTTCTTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSFRSGP*FSFFLL
Trigger: AAGCAAGAAGAAAGAGAAGCAGGGCCCTGAGCGGAA...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp CTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTCACTGTGCTCACTGGTaGAGCCAAAGGGACACGCAC +
Preference number: 2 (lower is better)
Translates to: LQPAAASRRRSSPGYRPRHCAHW*SQRDTH
Trigger: GTGCGTGTCCCTTTGGCTGCACCAGTGAGCACAGTG...ACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR-3UTR GCA 90 bp CTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGTGAGTGCCTGTGCCTGGCAGCACTaGAGAGAGCACACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: LHQGFPPCVANIPTHVSACAWQH*REHTPG
Trigger: GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACA...GGCACTCACGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR CCA 90 bp CACCTCCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTTGGTGTTGTGTCCACTaGGCTGTTGGCAGACTCCTC +
Preference number: 2 (lower is better)
Translates to: HLRTCSQQLLRDVVVAPVWCCVH*AVGRLL
Trigger: GAGGAGTCTGCCAACAGCCCAGTGGACACAACACCA...AACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR CCA 90 bp CTCAGCAGGAAAGGCTCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCTGTGCCCCACATCATaGAACCGGCTAGCTACGGGG +
Preference number: 2 (lower is better)
Translates to: LSRKGSQALRAHGAALGLLCPTS*NRLATG
Trigger: CCCCGTAGCTAGCCGGTTCCATGATGTGGGGCACAG...CAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGAGCCTTTCCTGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CCA 90 bp ACTGGTCCACGGCACACTGCAGTGCACATGCCCTTCCTGGCCAGAGGCTCCCAGGAACCAGCATGTGCCTaGCAGCACTGCAGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: TGPRHTAVHMPFLARGSQEPACA*QHCREH
Trigger: GTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTC...CTGGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR TCA 90 bp GTAGAGGACAGACTTCAAAAGCAGATACAAGAGGCCCCGGGCAGACAGGGCAGGCAGGGCAAGCTGGTCTaGGAGGGCTCGGTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: VEDRLQKQIQEAPGRQGRQGKLV*EGSVGR
Trigger: TCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTG...CCTGCCCTGTCTGCCCGGGGCCTCTTGTATCTGCTTTTGAAGTCTGTCCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644045.1
3UTR-3UTR GCA 90 bp GCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 2 (lower is better)
Translates to: ATRGSPRSSDEDISETRRLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...GCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp GGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGAAGCGCGGCATCAGGATaGACTGCAGAGTTGTGGGCT +
Preference number: 2 (lower is better)
Translates to: GTSMCLAALQRAHPRHQRSAASG*TAELWA
Trigger: AGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCT...TCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568924.1
3UTR-3UTR GCA 90 bp TGGGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTGCCTACCTCACCGTACCTCTCAGTGCCCACTaGTCCTGGGCCGGCCACAAT +
Preference number: 2 (lower is better)
Translates to: WGSQHGHLGGHYPAYLTVPLSAH*SWAGHN
Trigger: ATTGTGGCCGGCCCAGGAGCAGTGGGCACTGAGAGG...TACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp GTCAAGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTGCTGGTGACCCCTCAGCCTTaGTGTCCTGCCTGCAACCAG +
Preference number: 2 (lower is better)
Translates to: VKVLAGQDPSFPPSWGLLVTPQP*CPACNQ
Trigger: CTGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCAC...CAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp CCCACCCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACCCAGGCTGGGCTTGCTaGAGAGGAGCACGACGGGCA +
Preference number: 2 (lower is better)
Translates to: PTPPEQAVSQVSSLRPRHPGWAC*RGARRA
Trigger: TGCCCGTCGTGCTCCTCTGCAGCAAGCCCAGCCTGG...GTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp CACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCTGTGCCTGGCAGCACTaGAGAGAGCACACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: HLTLKEPACAWQHCREHTCAWQH*REHTPG
Trigger: GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACA...GGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR CCA 90 bp CTGAATGTGGTGGCTCTTAGGGTAACCCCAGAATCCTCACTGCGGCAACAAGACGGCCTGGCCTTGGGCTaGCCCTGCCCTGCGTGGGAT +
Preference number: 2 (lower is better)
Translates to: LNVVALRVTPESSLRQQDGLALG*PCPAWD
Trigger: ATCCCACGCAGGGCAGGGCCAGCCCAAGGCCAGGCC...GTCTTGTTGCCGCAGTGAGGATTCTGGGGTTACCCTAAGAGCCACCACATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
3UTR-3UTR TCA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCGTGAGTTTTCTATGGTaGCTACACAAAACCTCAGGC +
Preference number: 2 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSVSFLW*LHKTSG
Trigger: GCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCAC...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR TCA 90 bp CCACTGGTCCACGGCACACTGCAGTGCACATGCCCTTCCTGGCCAGAGGCTCCCACGTCAGGAAAAGACTaGAGGTGCCAAGCACCTAAC +
Preference number: 2 (lower is better)
Translates to: PLVHGTLQCTCPSWPEAPTSGKD*RCQAPN
Trigger: GTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACGT...GGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR TCA 90 bp CCGGCAGGACCCAAGTCCTCTGTATTCAGAGGCCGACCCTGCTTTCCAGAGACTGTCAACACACTGAGCTaGGGCCACTGGTCCACGGCA +
Preference number: 2 (lower is better)
Translates to: PAGPKSSVFRGRPCFPETVNTLS*GHWSTA
Trigger: TGCCGTGGACCAGTGGCCTCAGCTCAGTGTGTTGAC...AGTCTCTGGAAAGCAGGGTCGGCCTCTGAATACAGAGGACTTGGGTCCTGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
3UTR-3UTR GCA 90 bp CTGAATGTGGTGGCTCTTAGGGTAACCCCAGAATCCTCACTGCGGCAACAAGACGCCTTGGGCTGGCCCTaGCCTGCGTGGGATCTGTGC +
Preference number: 2 (lower is better)
Translates to: LNVVALRVTPESSLRQQDALGWP*PAWDLC
Trigger: GCACAGATCCCACGCAGGGCAGGGCCAGCCCAAGGC...GTCTTGTTGCCGCAGTGAGGATTCTGGGGTTACCCTAAGAGCCACCACATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
3UTR-3UTR CCA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGTGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: EVLDVDVCPLADELFDAPCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGTTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 2 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CCA 90 bp GTAGAGGACAGACTTCAAAAGCAGATACAAGAGGCCCCGGGCAGACAGGGCAGGTCTGAGAGGGCTCGGTaGGCAGAGCTGTCTTGGGGC +
Preference number: 2 (lower is better)
Translates to: VEDRLQKQIQEAPGRQGRSERAR*AELSWG
Trigger: GCCCCAAGACAGCTCTGCCCACCGAGCCCTCTCAGA...CCTGCCCTGTCTGCCCGGGGCCTCTTGTATCTGCTTTTGAAGTCTGTCCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644045.1
3UTR-3UTR TCA 90 bp GAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGTGGTCAACACACTGAGCTaGGGCCACTGGTCCACGGCA +
Preference number: 2 (lower is better)
Translates to: EKLHQGFPPCVANIPTHVVNTLS*GHWSTA
Trigger: TGCCGTGGACCAGTGGCCTCAGCTCAGTGTGTTGAC...CACGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR GCA 90 bp GATTCCGTGGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTTCTCTGCACTGTGCTCACTGGTaGAGCCAAAGGGACACGCAC +
Preference number: 2 (lower is better)
Translates to: DSVVGNGERPSAEGALSLHCAHW*SQRDTH
Trigger: GTGCGTGTCCCTTTGGCTGCACCAGTGAGCACAGTG...CAGAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR-3UTR GCA 90 bp CAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAAGGTCAGAGGTCAAGGTaGTGGCAGGGCAGGATCCTT +
Preference number: 2 (lower is better)
Translates to: QALRAHGAALGLQDDLGQGQRSR*WQGRIL
Trigger: AAGGATCCTGCCCTGCCAGCACCTTGACCTCTGACC...TTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp CCGTGTGTTGCTAACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCAACACACGGCACACTGCAGTaGACATGCCCTTCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: PCVANIPTHVSALGPSSTHGTLQ*TCPSWP
Trigger: TGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTG...TGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR GCA 90 bp GTGAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGCACGGCACACTGCAGTaGACATGCCCTTCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: VRNCIRASRRVLLTSPHTHGTLQ*TCPSWP
Trigger: TGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTG...CGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR CCA 90 bp CACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTTTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 2 (lower is better)
Translates to: HDGHQQMWPRVTPQPCCPFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...AGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR TCA 90 bp ACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGGCTAGAGGCCGTCCAGGCTaGCCCAGAAGGGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: TGTSRFSSELFKAKALWARGRPG*PRRGKL
Trigger: CAGCTTTCCCCTTCTGGGTCAGCCTGGACGGCCTCT...AGCCCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR TCA 90 bp CCTCGGGTTCTAACCTCTCCTGCTTCTGGCATCTCTCAGACTCAGCAGGAAAGGTTGCTGGGAAACCTGTaGGAGGCCGTCCAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: PRVLTSPASGISQTQQERLLGNL*EAVQAD
Trigger: GTCAGCCTGGACGGCCTCTCACAGGTTTCCCAGCAA...CCTTTCCTGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTTAGAACCCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR TCA 90 bp GGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGAACGTCAGGAAAAGACTaGAGGTGCCAAGCACCTAAC +
Preference number: 2 (lower is better)
Translates to: GTSMCLAALQRAHPRHQRTSGKD*RCQAPN
Trigger: GTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACGT...TCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR GCA 90 bp GGTAAGGGTGGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 2 (lower is better)
Translates to: GKGGHMTDRDNHGDTALFRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...GAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACCACCCTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp AGCCGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCATGTGCCTGGCAGCACTaGAGAGAGCACACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SRQNSRLLSEAPGTNMTSCAWQH*REHTPG
Trigger: GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACA...TGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR CCA 90 bp CCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGCTGTGCCCCACATCATaGAACCGGCTAGCTACGGGG +
Preference number: 2 (lower is better)
Translates to: PTGTSRFSSELFKAKALWLCPTS*NRLATG
Trigger: CCCCGTAGCTAGCCGGTTCCATGATGTGGGGCACAG...CCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CCA 90 bp TTTCCCCTTGTTCCAAAGAAACATCCACGTGCAGAGGGCAGGCAGCTTCGGCCCGAACCAGCATGTGCCTaGCAGCACTGCAGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: FPLVPKKHPRAEGRQLRPEPACA*QHCREH
Trigger: GTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTC...GGGCCGAAGCTGCCTGCCCTCTGCACGTGGATGTTTCTTTGGAACAAGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568924.1
3UTR CAA 90 bp CGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTTTTTGAGGCAGAGTTGGGCGTTCCC +
Preference number: 2 (lower is better)
Translates to: RMAARCRRVSPRSFL*FTLSLVFEAELGVP
Trigger: GGGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR GCA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCACGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 2 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp GGCAGGACCCAAGTCCTCTGTATTCAGAGGCCGACCCTGCTTTCCAGAGACTCAGAAGGAACCAGCATGTaGCTGGCAGCACTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: GRTQVLCIQRPTLLSRDSEGTSM*LAALQR
Trigger: TCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTC...TGAGTCTCTGGAAAGCAGGGTCGGCCTCTGAATACAGAGGACTTGGGTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
3UTR-3UTR CCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCTGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CCA 90 bp CTCAGCAGGAAAGGCTCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGTATGGTTCTGTGCACTaGCCACACCTCTTGGTGTTA +
Preference number: 2 (lower is better)
Translates to: LSRKGSQALRAHGAALGLYGSVH*PHLLVL
Trigger: TAACACCAAGAGGTGTGGCCAGTGCACAGAACCATA...CAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGAGCCTTTCCTGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CCA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCAGTGCCCACTGCTCCTaGGCCGGCCACAATGGCCAC +
Preference number: 2 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCSAHCS*AGHNGH
Trigger: GTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR CAA 90 bp TTGGCCTTGTGCTTGAGGCCTTTTTCGAACTCGGAGTCCGTGTTGTaGCCGTCGACTGAACTGGAAGGTGCGAAGGATGGTGCGTCTTCC +
Preference number: 2 (lower is better)
Translates to: LALCLRPFSNSESVL*PSTELEGAKDGASS
Trigger: GGAAGACGCACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCCTCAAGCACAAGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR-3UTR TCA 90 bp CTCAGCAGGAAAGGCTCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGTTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 2 (lower is better)
Translates to: LSRKGSQALRAHGAALGLFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...CAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGAGCCTTTCCTGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR TCA 90 bp GGCAGGACCCAAGTCCTCTGTATTCAGAGGCCGACCCTGCTTTCCAGAGACTCACTGCTACACGCTTGGTaGGAAACTGCATCAGGGCTT +
Preference number: 2 (lower is better)
Translates to: GRTQVLCIQRPTLLSRDSLLHAW*ETASGL
Trigger: AAGCCCTGATGCAGTTTCTCACCAAGCGTGTAGCAG...TGAGTCTCTGGAAAGCAGGGTCGGCCTCTGAATACAGAGGACTTGGGTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
3UTR CAA 90 bp TTCTTGGCCTTGTGCTTGAGGCCTTTTTCGAACTCGGAGTCCGTGTaGTTGCCGTCGACTGAACTGGAAGGTGCGAAGGATGGTGCGTCT +
Preference number: 2 (lower is better)
Translates to: FLALCLRPFSNSESV*LPSTELEGAKDGAS
Trigger: AGACGCACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCCTCAAGCACAAGGCCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR-3UTR TCA 90 bp GTCAAGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTGCTGGTGAGTTTTCTATGGTaGCTACACAAAACCTCAGGC +
Preference number: 2 (lower is better)
Translates to: VKVLAGQDPSFPPSWGLLVSFLW*LHKTSG
Trigger: GCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCAC...CAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR TCA 90 bp GTCAAGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTGCTGCCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCAC +
Preference number: 2 (lower is better)
Translates to: VKVLAGQDPSFPPSWGLLPLSKA*VYGSVH
Trigger: GTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGG...CAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp GGTAAGGGTGGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: GKGGHMTDRDNHGDTALFSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...GAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACCACCCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp CCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 2 (lower is better)
Translates to: PTGTSRFSSELFKAKALWLLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...CCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCACCTTGCTGTCCTGCCTaGAACCAGGGGCTCTCCACG +
Preference number: 2 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSPCCPA*NQGLST
Trigger: CGTGGAGAGCCCCTGGTTGCAGGCAGGACAGCAAGG...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CCA 90 bp GCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAATCTTCAGGCTTACAATTGTaGAGGTCAGAGGTCAAGGTG +
Preference number: 2 (lower is better)
Translates to: ALRAHGAALGLQDDLGQSSGLQL*RSEVKV
Trigger: CACCTTGACCTCTGACCTCCACAATTGTAAGCCTGA...AGATTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CCA 90 bp CAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAATATGGTTCTGTGCACTaGCCACACCTCTTGGTGTTA +
Preference number: 2 (lower is better)
Translates to: QALRAHGAALGLQDDLGQYGSVH*PHLLVL
Trigger: TAACACCAAGAGGTGTGGCCAGTGCACAGAACCATA...TTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CCA 90 bp GAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGTGTCCCACAGATACCAGTaGCTAAGTCTGTCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: EKLHQGFPPCVANIPTHVSHRYQ*LSLSSL
Trigger: GAGGGAAGACAGACTTAGCCACTGGTATCTGTGGGA...CACGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR CCA 90 bp GTGAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGGCACTGGGCAAGGTCTaGCATTCAGAGTTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: VRNCIRASRRVLLTSPHTALGKV*HSEFQE
Trigger: TTCTTGGAACTCTGAATGCCAGACCTTGCCCAGTGC...CGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR TCA 90 bp TGGGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTGCCTACCTCACCGTACCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCAC +
Preference number: 2 (lower is better)
Translates to: WGSQHGHLGGHYPAYLTVPLSKA*VYGSVH
Trigger: GTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGG...TACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp CCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGTTCCGCTCAGGGCCCTaGTTCTCTTTCTTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: PTGTSRFSSELFKAKALWFRSGP*FSFFLL
Trigger: AAGCAAGAAGAAAGAGAAGCAGGGCCCTGAGCGGAA...CCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CCA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCACTGTGCCCCACATCATaGAACCGGCTAGCTACGGGG +
Preference number: 2 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSLCPTS*NRLATG
Trigger: CCCCGTAGCTAGCCGGTTCCATGATGTGGGGCACAG...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR TCA 90 bp GAGAAGCCTCTTCAACTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGACGTCAGGAAAAGACTaGAGGTGCCAAGCACCTAAC +
Preference number: 2 (lower is better)
Translates to: EKPLQLHTLVASSTGQGLTSGKD*RCQAPN
Trigger: GTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACGT...CAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAAGAGGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR GCA 90 bp ACCAGCAACCTGGATTTCCTATGCCCAGAACAGCAATGCACTGAACTCAAGTACCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 2 (lower is better)
Translates to: TSNLDFLCPEQQCTELKYLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...GTACTTGAGTTCAGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp TTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAAGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 2 (lower is better)
Translates to: LSPTESVSSSCVTCSIVEVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...TTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR-3UTR CCA 90 bp TTTCCGAAAGGTAGCCAGGGACACTTTTATGCTTTTCGGTCTGCTCTTTCCTCTCTGTCCGCCAGTGCTTaGTGTGCTGGTCTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: FPKGSQGHFYAFRSALSSLSASA*CAGLCG
Trigger: GCCACACAGACCAGCACACCAAGCACTGGCGGACAG...AGAGGAAAGAGCAGACCGAAAAGCATAAAAGTGTCCCTGGCTACCTTTCGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR-3UTR CCA 90 bp CATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTAAGTCTGTCTTCCCTTCTTCCCTCCAGGAATaGGGAAGCAGGAGCCGTCAG +
Preference number: 2 (lower is better)
Translates to: HSEFQEVPQIPVAKSVFPSSLQE*GSRSRQ
Trigger: CTGACGGCTCCTGCTTCCCCATTCCTGGAGGGAAGA...AGGGAAGACAGACTTAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR TCA 90 bp CCTCGGGTTCTAACCTCTCCTGCTTCTGGCATCTCTCAGACTCAGCAGGAAAGGCCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCAC +
Preference number: 2 (lower is better)
Translates to: PRVLTSPASGISQTQQERPLSKA*VYGSVH
Trigger: GTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGG...CCTTTCCTGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTTAGAACCCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 2 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCLLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CCA 90 bp AACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGCAGCAATGGCCAGGCTaGGCTTGCTGCAGAGGAGCA +
Preference number: 2 (lower is better)
Translates to: NVYYRLLSPTESVSSSCVQQWPG*ACCRGA
Trigger: TGCTCCTCTGCAGCAAGCCCAGCCTGGCCATTGCTG...CACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp TCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAATCATCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: SPTESVSSSCVTCSIVESSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...TGATTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp AACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGGGTCAGAGGTCAAGGTaGTGGCAGGGCAGGATCCTT +
Preference number: 2 (lower is better)
Translates to: NVYYRLLSPTESVSSSCVGQRSR*WQGRIL
Trigger: AAGGATCCTGCCCTGCCAGCACCTTGACCTCTGACC...CACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCAAAACTCGCTTTCCTGTaGCCCACATCATGGAACCGG +
Preference number: 2 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSKLAFL*PTSWNR
Trigger: CCGGTTCCATGATGTGGGGCACAGGAAAGCGAGTTT...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp ACCAGCAACCTGGATTTCCTATGCCCAGAACAGCAATGCACTGAACTCAAGTACGAGTCTATGGTTCTGTaGACTGGCCACACCTCTTGG +
Preference number: 2 (lower is better)
Translates to: TSNLDFLCPEQQCTELKYESMVL*TGHTSW
Trigger: CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC...GTACTTGAGTTCAGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTTGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CCA 90 bp TCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAATCATGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: SPTESVSSSCVTCSIVESCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...TGATTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CCA 90 bp TGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTTTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 2 (lower is better)
Translates to: WAGHNGHFLKLESMVLCTFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...AGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CCA 90 bp TTTCCGAAAGGTAGCCAGGGACACTTTTATGCTTTTCGGTCTGCTCTTTCCTCTTGCCGTCGACTGAACTaGAAGGTGCGAAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: FPKGSQGHFYAFRSALSSCRRLN*KVRRMV
Trigger: CACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCA...AGAGGAAAGAGCAGACCGAAAAGCATAAAAGTGTCCCTGGCTACCTTTCGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR-3UTR CCA 90 bp TCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAATCACTGTGCCCCACATCATaGAACCGGCTAGCTACGGGG +
Preference number: 2 (lower is better)
Translates to: SPTESVSSSCVTCSIVESLCPTS*NRLATG
Trigger: CCCCGTAGCTAGCCGGTTCCATGATGTGGGGCACAG...TGATTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR TCA 90 bp TTTCCGAAAGGTAGCCAGGGACACTTTTATGCTTTTCGGTCTGCTCTTTCCTCTTCTTGGCCTTGTGCTTaGGGCCTTTTTCGAACTCGG +
Preference number: 2 (lower is better)
Translates to: FPKGSQGHFYAFRSALSSSWPCA*GLFRTR
Trigger: CCGAGTTCGAAAAAGGCCTCAAGCACAAGGCCAAGA...AGAGGAAAGAGCAGACCGAAAAGCATAAAAGTGTCCCTGGCTACCTTTCGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR-3UTR TCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGGACCCCCACAGAGGCTaGGACCTCTCAGTGCCCACT +
Preference number: 2 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVDPHRG*DLSVPT
Trigger: AGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTC...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp TCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAATCAAGCGCGGCATCAGGATaGACTGCAGAGTTGTGGGCT +
Preference number: 2 (lower is better)
Translates to: SPTESVSSSCVTCSIVESSAASG*TAELWA
Trigger: AGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCT...TGATTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR-3UTR TCA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCTTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 2 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR GCA 90 bp AACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGGAGTCTATGGTTCTGTaGACTGGCCACACCTCTTGG +
Preference number: 2 (lower is better)
Translates to: NVYYRLLSPTESVSSSCVESMVL*TGHTSW
Trigger: CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC...CACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR GCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGAACGATGCAGACACCTaGTGGTTCTTCCCGAGGCAG +
Preference number: 2 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVNDADT*WFFPRQ
Trigger: CTGCCTCGGGAAGAACCAGCAGGTGTCTGCATCGTT...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR-3UTR CCA 90 bp AACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGTCATCACCAGCAACCTaGATTTCCTATGCCCAGAAC +
Preference number: 2 (lower is better)
Translates to: NVYYRLLSPTESVSSSCVSSPAT*ISYAQN
Trigger: GTTCTGGGCATAGGAAATCCAGGTTGCTGGTGATGA...CACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CCA 90 bp CATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTACTGGCCACACCTCTTaGTGTTACCTCATTCCAGAC +
Preference number: 2 (lower is better)
Translates to: HNVYYRLLSPTESVSSSCTGHTS*CYLIPD
Trigger: GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGT...ACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CCA 90 bp AACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGTATGGTTCTGTGCACTaGCCACACCTCTTGGTGTTA +
Preference number: 2 (lower is better)
Translates to: NVYYRLLSPTESVSSSCVYGSVH*PHLLVL
Trigger: TAACACCAAGAGGTGTGGCCAGTGCACAGAACCATA...CACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CCA 90 bp TTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAAAACCTCTCCTGCTTCTaGCATCTCTCAGACTCAGCA +
Preference number: 2 (lower is better)
Translates to: LSPTESVSSSCVTCSIVENLSCF*HLSDSA
Trigger: TGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTT...TTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR TCA 90 bp CATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGAGTTTTCTATGGTaGCTACACAAAACCTCAGGC +
Preference number: 2 (lower is better)
Translates to: HNVYYRLLSPTESVSSSCVSFLW*LHKTSG
Trigger: GCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCAC...ACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR GCA 72 bp CAGAGGCTCCCAGGGGCGCCATGCTCTCCAGGCACCTaGCCCGCCTGCGAGCACAGCCTGGCCCCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: QRLPGAPCSPGT*PACEHSLAPAA
Trigger: TGCAGCAGGGGCCAGGCTGTGCTCGCAGGCGGGGCAGGTGCCTGGAGAGCATGGCGCCCCTGGGAGCCTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR TCA 72 bp TGGAGATGGCGGCGGGGACGGCGTCCACTCCGTCCTTaGCGTCCTCCAGCCCCGGCTCAGCGACGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: WRWRRGRRPLRP*RPPAPAQRRAE
Trigger: CTCTGCCCGTCGCTGAGCCGGGGCTGGAGGACGTCAAGGACGGAGTGGACGCCGTCCCCGCCGCCATCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR-3UTR CAA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 3 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGSLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR CAA 90 bp TTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 3 (lower is better)
Translates to: FDAPGVPADGGSVQAGLSAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...GGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR CAA 90 bp GGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGCCCCAGCCTGCGAAGTCCTaGACGTTGACGTCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: GHLLALGEGVAGSDSRQPQPAKS*TLTSAP
Trigger: GGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTG...GGGCTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CAA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCGGGCACAGCTCGGCCTaGAGGGTGGGCAAGGCGAAA +
Preference number: 3 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSGHSSA*RVGKAK
Trigger: TTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCC...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CAA 90 bp GCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 3 (lower is better)
Translates to: AASPGSTPAFRQDGAVRHAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...GTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR GCA 72 bp TTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTC +
Preference number: 3 (lower is better)
Translates to: LMRRASPRMAAR*RRVSPRSFLLF
Trigger: GAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR GCA 72 bp CTGAGGCCACTGGTCCACGGCACACTGCAGTGCACATaGCCTTCCTGGCCAGAGGCTCCCAGGGGCGCCATG +
Preference number: 3 (lower is better)
Translates to: LRPLVHGTLQCT*PSWPEAPRGAM
Trigger: CATGGCGCCCCTGGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGTGGCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR CCA 72 bp GGGCTCGGTGGGCAGAGCTGTCTTGGGGCCGGGACATaGCAGGTGCCTTCCCACTCCTTGCTGCACCCACAG +
Preference number: 3 (lower is better)
Translates to: GLGGQSCLGAGT*QVPSHSLLHPQ
Trigger: CTGTGGGTGCAGCAAGGAGTGGGAAGGCACCTGCCATGTCCCGGCCCCAAGACAGCTCTGCCCACCGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644045.1
3UTR-3UTR CAA 90 bp TCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGACCATCGTGGGGGAGTaGGCCACTTTCAGCGGCGTC +
Preference number: 3 (lower is better)
Translates to: SPRMAARCRRVSPRSFLLTIVGE*ATFSGV
Trigger: GACGCCGCTGAAAGTGGCCAACTCCCCCACGATGGT...CAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR GCA 72 bp ATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTaGTTTCCGGCAGGACGGGGCTGTCAGGCACACCAC +
Preference number: 3 (lower is better)
Translates to: ISETRRISRQHP*FPAGRGCQAHH
Trigger: GTGGTGTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR GCA 72 bp GGGCTCCAGGACCTCCAGCAATGGCCAGGCTGGGCTTaGTGCAGAGGAGCACGACGGGCACCAGCAGATGTG +
Preference number: 3 (lower is better)
Translates to: GLQDLQQWPGWA*CRGARRAPADV
Trigger: CACATCTGCTGGTGCCCGTCGTGCTCCTCTGCAGCAAGCCCAGCCTGGCCATTGCTGGAGGTCCTGGAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR CCA 72 bp CTTGCTGCAGAGGAGCACGACGGGCACCAGCAGATGTaGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCC +
Preference number: 3 (lower is better)
Translates to: LAAEEHDGHQQM*PRVTPQPCCPA
Trigger: GGCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTCCTCTGCAGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR CCA 72 bp CACTGTGGGCTCCAGGACCTCCAGCAATGGCCAGGCTaGGCTTGCTGCAGAGGAGCACGACGGGCACCAGCA +
Preference number: 3 (lower is better)
Translates to: HCGLQDLQQWPG*ACCRGARRAPA
Trigger: TGCTGGTGCCCGTCGTGCTCCTCTGCAGCAAGCCCAGCCTGGCCATTGCTGGAGGTCCTGGAGCCCACAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR GCA 72 bp CGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGC +
Preference number: 3 (lower is better)
Translates to: RRPACEVLDVDV*PLADELFDAPG
Trigger: GCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR CAA 90 bp TGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCCTGCGAAGTCCTaGACGTTGACGTCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: CSQQLLRDVVVAPVTGLVQPAKS*TLTSAP
Trigger: GGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTG...CACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR CAA 90 bp TCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTCGTCATCTAGGCCCTaGGTGTTCACCTCCGCACCT +
Preference number: 3 (lower is better)
Translates to: SPRMAARCRRVSPRSFLLSSSRP*VFTSAP
Trigger: AGGTGCGGAGGTGAACACCAAGGGCCTAGATGACGA...CAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR CCA 72 bp GGGCAGGCAAGATGGGCTAGAAGTCCCAGGGCAAGCTaGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTTGG +
Preference number: 3 (lower is better)
Translates to: GQARWARSPRAS*SERARWAELSW
Trigger: CCAAGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGCCCATCTTGCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
3UTR-3UTR CAA 90 bp CCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: PHLQPAAASRRRSSPGYRRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...CCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR CAA 90 bp ATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 3 (lower is better)
Translates to: MKTSVRPAASPGSTPAFRSLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...CCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CAA 90 bp GCTGCTCACGTGCCAGCACCCACTGGCCAAGCATCCTCCGGCAGGACCCAAGTCACACACGTGAGTGCCTaGGGACCCTCGTCAACACAC +
Preference number: 3 (lower is better)
Translates to: AAHVPAPTGQASSGRTQVTHVSA*GPSSTH
Trigger: GTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGT...GACTTGGGTCCTGCCGGAGGATGCTTGGCCAGTGGGTGCTGGCACGTGAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
3UTR-3UTR CAA 90 bp CTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: LQPAAASRRRSSPGYRPRRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...ACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR TCA 72 bp CCTGTGTGGGGTGCGTGGGGTCTGCTACACGCTTGGTaGGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGC +
Preference number: 3 (lower is better)
Translates to: PVWGAWGLLHAW*ETASGLPAVCC
Trigger: GCAACACACGGCGGGAAGCCCTGATGCAGTTTCTCACCAAGCGTGTAGCAGACCCCACGCACCCCACACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR GCA 72 bp ACTTTCAGCGGCGTCTCGCCTTTCCTGTTGCTCTGCTaGGGGTTCCCTCCGTACCGCAGCAGCAGCTTCACC +
Preference number: 3 (lower is better)
Translates to: TFSGVSPFLLLC*GFPPYRSSSFT
Trigger: GGTGAAGCTGCTGCTGCGGTACGGAGGGAACCCGCAGCAGAGCAACAGGAAAGGCGAGACGCCGCTGAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 72 bp CTCTCTGCCCGCTCGGGTCCACTGCAGCTGAGCGGGTaGGAGAAGCCTCTTCAACTTCACACACTTGTCGCC +
Preference number: 3 (lower is better)
Translates to: LSARSGPLQLSG*EKPLQLHTLVA
Trigger: GGCGACAAGTGTGTGAAGTTGAAGAGGCTTCTCCCACCCGCTCAGCTGCAGTGGACCCGAGCGGGCAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR CAA 90 bp CTTCCCAAAGTCGCCGTCGGACTTGTCCTTGAAGCCACTCTCGCAGCCACACTCGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 3 (lower is better)
Translates to: LPKVAVGLVLEATLAATLAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...GAGTGTGGCTGCGAGAGTGGCTTCAAGGACAAGTCCGACGGCGACTTTGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR TCA 72 bp ACTCTGCTCTCTCTGCCCGCTCGGGTCCACTGCAGCTaGGCGGGTGGGAGAAGCCTCTTCAACTTCACACAC +
Preference number: 3 (lower is better)
Translates to: TLLSLPARVHCS*AGGRSLFNFTH
Trigger: GTGTGTGAAGTTGAAGAGGCTTCTCCCACCCGCTCAGCTGCAGTGGACCCGAGCGGGCAGAGAGAGCAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR TCA 72 bp CGTGAGTGCCTTGGGACCCTCGTCAACACACTGAGCTaGGGCCACTGGTCCACGGCACACTGCAGTGCACAT +
Preference number: 3 (lower is better)
Translates to: RECLGTLVNTLS*GHWSTAHCSAH
Trigger: ATGTGCACTGCAGTGTGCCGTGGACCAGTGGCCTCAGCTCAGTGTGTTGACGAGGGTCCCAAGGCACTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR GCA 72 bp GCGCAGGTGCGGCCCTCCTCGGGTTCTAACCTCTCCTaGTTCTGGCATCTCTCAGACTCAGCAGGAAAGGCT +
Preference number: 3 (lower is better)
Translates to: AQVRPSSGSNLS*FWHLSDSAGKA
Trigger: AGCCTTTCCTGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTTAGAACCCGAGGAGGGCCGCACCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR GCA 72 bp AGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTaGCTGGCAGCACTGCAGAGAGCACACCCCAGGCAC +
Preference number: 3 (lower is better)
Translates to: RCQAPNAEGTSM*LAALQRAHPRH
Trigger: GTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
3UTR CCA 72 bp CACCTGCTGGTTCTTCCCGAGGCAGCTCAGCGGTTCTaGGATTCCGTGGTCGGCAATGGTGAGAGACCGTCT +
Preference number: 3 (lower is better)
Translates to: HLLVLPEAAQRF*DSVVGNGERPS
Trigger: AGACGGTCTCTCACCATTGCCGACCACGGAATCCCAGAACCGCTGAGCTGCCTCGGGAAGAACCAGCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR CCA 72 bp GTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATaGGGGCTTGTAGTGCCCGTTGTTGGCAGCGTCGTG +
Preference number: 3 (lower is better)
Translates to: VLAGQDPSFPPS*GLVVPVVGSVV
Trigger: CACGACGCTGCCAACAACGGGCACTACAAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR-3UTR CAA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGCTTTATCTTTGGTTTTaGAGGCAGAGTTGGGCGTTC +
Preference number: 3 (lower is better)
Translates to: ADELFDAPGVPADGGSVQLYLWF*RQSWAF
Trigger: GAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAG...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR TCA 72 bp ATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTTCTCTaGCACGCCTGCCACTGTGCTCACTGGTGCAGCCAA +
Preference number: 3 (lower is better)
Translates to: MVRDRLQKGPFL*HACHCAHWCSQ
Trigger: TTGGCTGCACCAGTGAGCACAGTGGCAGGCGTGTCAGAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR TCA 72 bp AGCTCAGCGGTTCTGGGATTCCGTGGTCGGCAATGGTaGGAGACCGTCTGCAGAAGGGGCCCTTTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: SSAVLGFRGRQW*ETVCRRGPFSD
Trigger: GTCAGAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATCCCAGAACCGCTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR TCA 72 bp GCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGTaGGTGCCTTGGGACCCTCGTCAACACACTGAGCTG +
Preference number: 3 (lower is better)
Translates to: ASRRVLLTSPHT*VPWDPRQHTEL
Trigger: CAGCTCAGTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR GCA 72 bp CCCCGGCGGTCCTTTGGATCAGAACACACTCAACGATaGAGACACCTGCTGGTTCTTCCCGAGGCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: PRRSFGSEHTQR*RHLLVLPEAAQ
Trigger: CTGAGCTGCCTCGGGAAGAACCAGCAGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGGACCGCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568924.1
3UTR GCA 72 bp GGGTGCGTGGGGTCTGCTACACGCTTGGTGAGAAACTaGATCAGGGCTTCCCGCCGTGTGTTGCTAACATCC +
Preference number: 3 (lower is better)
Translates to: GCVGSATRLVRN*IRASRRVLLTS
Trigger: GGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTCACCAAGCGTGTAGCAGACCCCACGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR CCA 72 bp CTCATACTCGTCCTTGACGGGGGCCGTGGCCTTCTGTaGCTCTGGGTTCTTGGCCTTGTGCTTGAGGCCTTT +
Preference number: 3 (lower is better)
Translates to: LILVLDGGRGLL*LWVLGLVLEAF
Trigger: AAAGGCCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCACGGCCCCCGTCAAGGACGAGTATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR-3UTR CAA 90 bp ACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGGCTGGGCACAGCTCGGCCTaGAGGGTGGGCAAGGCGAAA +
Preference number: 3 (lower is better)
Translates to: TGTSRFSSELFKAKALWAGHSSA*RVGKAK
Trigger: TTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCC...AGCCCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CAA 90 bp GGGATTCCGTGGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTTCTCGGATGCACTGCAGAGTaGTGGGCTCCATTTCCATCT +
Preference number: 3 (lower is better)
Translates to: GIPWSAMVRDRLQKGPFLGCTAE*WAPFPS
Trigger: AGATGGAAATGGAGCCCACAACTCTGCAGTGCATCC...GAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR-3UTR CAA 90 bp GTCTGCAGAAGGGGCCCTTTCTCTGACACGCCTGCCACTGTGCTCACTGGTGCAGGATGCACTGCAGAGTaGTGGGCTCCATTTCCATCT +
Preference number: 3 (lower is better)
Translates to: VCRRGPFSDTPATVLTGAGCTAE*WAPFPS
Trigger: AGATGGAAATGGAGCCCACAACTCTGCAGTGCATCC...TGCACCAGTGAGCACAGTGGCAGGCGTGTCAGAGAAAGGGCCCCTTCTGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR-3UTR CAA 90 bp CCGCCGTGTGTTGCTAACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCATTCAACTTCACACACTaGTCGCCTCTAGCACTGGGC +
Preference number: 3 (lower is better)
Translates to: PPCVANIPTHVSALGPSSFNFTH*SPLALG
Trigger: GCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAA...TGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACACGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR TCA 72 bp CGAGCCTTTCATAGATGGCACTTGCTGGGAAACCTGTaGGAGGCCGTCCAGGCTGACCCAGAAGGGGAAAGC +
Preference number: 3 (lower is better)
Translates to: RAFHRWHLLGNL*EAVQADPEGES
Trigger: GCTTTCCCCTTCTGGGTCAGCCTGGACGGCCTCTCACAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR GCA 72 bp CCGTCGAGCTCTCCTCGCTGGAAGTGTAAGTGCCTTTaGCTAACAGGAGGTTCACCATCGTGGGGGAGTTGG +
Preference number: 3 (lower is better)
Translates to: PSSSPRWKCKCL*LTGGSPSWGSW
Trigger: CCAACTCCCCCACGATGGTGAACCTCCTGTTAGGCAAAGGCACTTACACTTCCAGCGAGGAGAGCTCGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR GCA 72 bp AGCTCTCCGTCGAGCTCTCCTCGCTGGAAGTGTAAGTaGCTTTGCCTAACAGGAGGTTCACCATCGTGGGGG +
Preference number: 3 (lower is better)
Translates to: SSPSSSPRWKCK*LCLTGGSPSWG
Trigger: CCCCCACGATGGTGAACCTCCTGTTAGGCAAAGGCACTTACACTTCCAGCGAGGAGAGCTCGACGGAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR GCA 72 bp ACACGCACAAGCCGTCAGGTCAGCGCGGCATCAGGATaGACTGCAGAGTTGTGGGCTCCATTTCCATCTTCC +
Preference number: 3 (lower is better)
Translates to: TRTSRQVSAASG*TAELWAPFPSS
Trigger: GGAAGATGGAAATGGAGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCTGACCTGACGGCTTGTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR GCA 72 bp CAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTaGTGGCAGAATTCAGTTTCTTGCAGGGCTGGGACG +
Preference number: 3 (lower is better)
Translates to: QGRILPFLHHGG*WQNSVSCRAGT
Trigger: CGTCCCAGCCCTGCAAGAAACTGAATTCTGCCAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR GCA 72 bp GCAGGACCCAAGTCCTCTGTATTCAGAGGCCGACCCTaGTTTCCAGAGACTCACGAGGTGGCAGAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: AGPKSSVFRGRP*FPETHEVAESQ
Trigger: CTGACTCTCTGCCACCTCGTGAGTCTCTGGAAAGCAGGGTCGGCCTCTGAATACAGAGGACTTGGGTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
3UTR CCA 72 bp CTTTGCCTAACAGGAGGTTCACCATCGTGGGGGAGTTaGCCACTTTCAGCGGCGTCTCGCCTTTCCTGTTGC +
Preference number: 3 (lower is better)
Translates to: LCLTGGSPSWGS*PLSAASRLSCC
Trigger: GCAACAGGAAAGGCGAGACGCCGCTGAAAGTGGCCAACTCCCCCACGATGGTGAACCTCCTGTTAGGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 72 bp CTTTCCTCCATCATGGGGGCTTGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCGTGTCGTCATCTAGGC +
Preference number: 3 (lower is better)
Translates to: LSSIMGACSARC*QRRAKACRHLG
Trigger: GCCTAGATGACGACACGCCTTTGCACGACGCTGCCAACAACGGGCACTACAAGCCCCCATGATGGAGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR CCA 72 bp GTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATaGGGGCTGCTGGCAGAATTCAGTTTCTTGCAGGGC +
Preference number: 3 (lower is better)
Translates to: VLAGQDPSFPPS*GLLAEFSFLQG
Trigger: GCCCTGCAAGAAACTGAATTCTGCCAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CAA 90 bp CGTGGCCTTCTGTGGCTCTGGGTTCTTGGCCTTGTGCTTGAGGCCTTTTTCGAAAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: RGLLWLWVLGLVLEAFFERGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...TTCGAAAAAGGCCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR-3UTR CAA 90 bp CAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 3 (lower is better)
Translates to: QQLLRDVVVAPVTGLVQRPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...GCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
3UTR-3UTR CAA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCGGGCACAGCTCGGCCTaGAGGGTGGGCAAGGCGAAA +
Preference number: 3 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCGHSSA*RVGKAK
Trigger: TTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCC...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CAA 90 bp GGCAGGACCCAAGTCCTCTGTATTCAGAGGCCGACCCTGCTTTCCAGAGACTCAGGGTCTGCTACACGCTaGGTGAGAAACTGCATCAGG +
Preference number: 3 (lower is better)
Translates to: GRTQVLCIQRPTLLSRDSGSATR*VRNCIR
Trigger: CCTGATGCAGTTTCTCACCAAGCGTGTAGCAGACCC...TGAGTCTCTGGAAAGCAGGGTCGGCCTCTGAATACAGAGGACTTGGGTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
3UTR GCA 72 bp CCTTTGGATCAGAACACACTCAACGATGCAGACACCTaGTGGTTCTTCCCGAGGCAGCTCAGCGGTTCTGGG +
Preference number: 3 (lower is better)
Translates to: PLDQNTLNDADT*WFFPRQLSGSG
Trigger: CCCAGAACCGCTGAGCTGCCTCGGGAAGAACCAGCAGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR CCA 72 bp TGTAAGTGCCTTTGCCTAACAGGAGGTTCACCATCGTaGGGGAGTTGGCCACTTTCAGCGGCGTCTCGCCTT +
Preference number: 3 (lower is better)
Translates to: CKCLCLTGGSPS*GSWPLSAASRL
Trigger: AAGGCGAGACGCCGCTGAAAGTGGCCAACTCCCCCACGATGGTGAACCTCCTGTTAGGCAAAGGCACTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 72 bp CGAACTCGGAGTCCGTGTTGTTGCCGTCGACTGAACTaGAAGGTGCGAAGGATGGTGCGTCTTCCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: RTRSPCCCRRLN*KVRRMVRLPLL
Trigger: CAGAAGAGGAAGACGCACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 72 bp CACTCACAAGGTCTGGGGGTCACAACACGGGCATCTTaGGGGCCATTATCCTGCCTACCTCACCGTAATTCC +
Preference number: 3 (lower is better)
Translates to: HSQGLGVTTRAS*GPLSCLPHRNS
Trigger: GGAATTACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCAGACCTTGTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR TCA 72 bp TGGCCTTCTGTGGCTCTGGGTTCTTGGCCTTGTGCTTaGGGCCTTTTTCGAACTCGGAGTCCGTGTTGTTGC +
Preference number: 3 (lower is better)
Translates to: WPSVALGSWPCA*GLFRTRSPCCC
Trigger: GCAACAACACGGACTCCGAGTTCGAAAAAGGCCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR TCA 72 bp CTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCACTGGCCACACCTCTTG +
Preference number: 3 (lower is better)
Translates to: LLGRPQWPLSKA*VYGSVHWPHLL
Trigger: CAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
3UTR GCA 72 bp GGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTaGCTACCTCACCGTAATTCCAGGGTCCTTGACATT +
Preference number: 3 (lower is better)
Translates to: GVTTRASWGPLS*LPHRNSRVLDI
Trigger: AATGTCAAGGACCCTGGAATTACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR CCA 72 bp CAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCTaGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGG +
Preference number: 3 (lower is better)
Translates to: QAYNCGGQRSRC*QGRILPFLHHG
Trigger: CCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGACCTCTGACCTCCACAATTGTAAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR CCA 72 bp CTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTaGTGTTACCTCATTCCAGACGAGGGTGGGTCTGCC +
Preference number: 3 (lower is better)
Translates to: LESMVLCTGHTS*CYLIPDEGGSA
Trigger: GGCAGACCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
3UTR-3UTR CAA 90 bp GGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: GHFLKLESMVLCTGHTSWRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CAA 90 bp ACCAGCAACCTGGATTTCCTATGCCCAGAACAGCAATGCACTGAACTCAAGTACGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 3 (lower is better)
Translates to: TSNLDFLCPEQQCTELKYAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...GTACTTGAGTTCAGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTTGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
3UTR TCA 72 bp TTTTTCGAACTCGGAGTCCGTGTTGTTGCCGTCGACTaGACTGGAAGGTGCGAAGGATGGTGCGTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: FFELGVRVVAVD*TGRCEGWCVFL
Trigger: GAGGAAGACGCACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR GCA 72 bp AATAGGTGCTTGTCGTCCACCGGAGGAACCCTGTCCTaGTCGTCGTCCTCATCAAACTCATACTCGTCCTTG +
Preference number: 3 (lower is better)
Translates to: NRCLSSTGGTLS*SSSSSNSYSSL
Trigger: CAAGGACGAGTATGAGTTTGATGAGGACGACGAGCAGGACAGGGTTCCTCCGGTGGACGACAAGCACCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CCA 72 bp CAGGTCAGCGCGGCATCAGGATGCACTGCAGAGTTGTaGGCTCCATTTCCATCTTCCACGTATATGTCACTG +
Preference number: 3 (lower is better)
Translates to: QVSAASGCTAEL*APFPSSTYMSL
Trigger: CAGTGACATATACGTGGAAGATGGAAATGGAGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCTGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
3UTR-3UTR CAA 90 bp TGGGGGCCATTATCCTGCCTACCTCACCGTAATTCCAGGGTCCTTGACATTTTTTCGTCATCTAGGCCCTaGGTGTTCACCTCCGCACCT +
Preference number: 3 (lower is better)
Translates to: WGPLSCLPHRNSRVLDIFSSSRP*VFTSAP
Trigger: AGGTGCGGAGGTGAACACCAAGGGCCTAGATGACGA...AAAAATGTCAAGGACCCTGGAATTACGGTGAGGTAGGCAGGATAATGGCCCCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR-3UTR CAA 90 bp TTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAATCCTTCTGCTCCCCATaGGCGCCCGCGGTGAAGGGC +
Preference number: 3 (lower is better)
Translates to: LSPTESVSSSCVTCSIVESFCSP*APAVKG
Trigger: GCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGA...TTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR-3UTR CAA 90 bp CTGAATGTGGTGGCTCTTAGGGTAACCCCAGAATCCTCACTGCGGCAACAAGACTTCAACTTCACACACTaGTCGCCTCTAGCACTGGGC +
Preference number: 3 (lower is better)
Translates to: LNVVALRVTPESSLRQQDFNFTH*SPLALG
Trigger: GCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAA...GTCTTGTTGCCGCAGTGAGGATTCTGGGGTTACCCTAAGAGCCACCACATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
3UTR CCA 72 bp GGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTaGCTAAGTCTGTCTTCCCTCCAGGAATGGGGAAGC +
Preference number: 3 (lower is better)
Translates to: GIQSSKKSHRYQ*LSLSSLQEWGS
Trigger: GCTTCCCCATTCCTGGAGGGAAGACAGACTTAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR CAA 90 bp ATCTGTCATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTGGGCACAGCTCGGCCTaGAGGGTGGGCAAGGCGAAA +
Preference number: 3 (lower is better)
Translates to: ICHNVYYRLLSPTESVSSGHSSA*RVGKAK
Trigger: TTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCC...ACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATGACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR TCA 72 bp ACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATaGCGTCAGGAAAAGACTGAAGGTGCCAAGCACCTA +
Preference number: 3 (lower is better)
Translates to: TAVSYLRHQEQT*RQEKTEGAKHL
Trigger: TAGGTGCTTGGCACCTTCAGTCTTTTCCTGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
3UTR CCA 72 bp TTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTaGCATTCAGAGTTCCAAGAAGTCCCACAGATACCA +
Preference number: 3 (lower is better)
Translates to: FTHLSPLALGKV*HSEFQEVPQIP
Trigger: TGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR-3UTR CAA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCCCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 3 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR GCA 72 bp TTATCTTTATCCTTTGGATCAGAACACACTCAACGATaGAGACACCTGCTGGTTCTTCCCGAGGCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: LSLSFGSEHTQR*RHLLVLPEAAQ
Trigger: CTGAGCTGCCTCGGGAAGAACCAGCAGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGGATAAAGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR-3UTR CAA 90 bp CATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTCACTGGCCACACCTCTaGGTGTTACCTCATTCCAGA +
Preference number: 3 (lower is better)
Translates to: HNVYYRLLSPTESVSSSCHWPHL*VLPHSR
Trigger: TCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTG...ACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR GCA 72 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTaGACTGGCCACACCTCTTGGTGTTACCTCATTCCA +
Preference number: 3 (lower is better)
Translates to: NGHFLKLESMVL*TGHTSWCYLIP
Trigger: TGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
3UTR TCA 72 bp GGTCATATTTTAACATCAAATAGGGACTCAGTGTTCTaGGTTCCCTGCTCGTCTCAGAGTCTTCAATCCACC +
Preference number: 3 (lower is better)
Translates to: GHILTSNRDSVF*VPCSSQSLQST
Trigger: GGTGGATTGAAGACTCTGAGACGAGCAGGGAACTCAGAACACTGAGTCCCTATTTGATGTTAAAATATGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR-3UTR CAA 90 bp ACCAGCAACCTGGATTTCCTATGCCCAGAACAGCAATGCACTGAACTCAAGTACCTTTATCTTTATCCTTaGGATCAGAACACACTCAAC +
Preference number: 3 (lower is better)
Translates to: TSNLDFLCPEQQCTELKYLYLYP*DQNTLN
Trigger: GTTGAGTGTGTTCTGATCCAAAGGATAAAGATAAAG...GTACTTGAGTTCAGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTTGCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
3UTR TCA 72 bp TCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTaGCATGTTCTATTGTTGAATCAGTACAGAGTTCTT +
Preference number: 3 (lower is better)
Translates to: SCRPQNQFPVRV*HVLLLNQYRVL
Trigger: AAGAACTCTGTACTGATTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTTCCACCTGGCCGAGGTaGGACAGGCCGCGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGSTWPR*DRPRLP
Trigger: CGGCAGCCGCGGCCTGTCTCACCTCGGCCAGGTGGA...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp CGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: RASPRMAARCRRVSPRSFHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...AAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGTCGTGCTCCGAGGGCTaGGCGGCTCCGCGACGGCTC +
Preference number: 4 (lower is better)
Translates to: ADELFDAPGVPADGGSVQSCSEG*AAPRRL
Trigger: GAGCCGTCGCGGAGCCGCGCAGCCCTCGGAGCACGA...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: PAASPGSTPAFRQDGAVRRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...CCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGGCAGCCGGTGGGCAGTaGAAAGCGTCGACTTTGGGC +
Preference number: 4 (lower is better)
Translates to: DAPGVPADGGSVQAGLSTAAGGQ*KASTLG
Trigger: GCCCAAAGTCGACGCTTTGCACTGCCCACCGGCTGC...CGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp TTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCAATGGCGGCCGTCGCCTaGTGGTCCTCGGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LMRRASPRMAARCRRVSPMAAVA*WSSEVS
Trigger: GGACACCTCCGAGGACCAGCAGGCGACGGCCGCCAT...TGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGCCTGCTCGGAGGGGTaGGCCCACTCAACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PLADELFDAPGVPADGGSACSEG*AHSTGS
Trigger: GGAGCCCGTTGAGTGGGCCCACCCCTCCGAGCAGGC...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CAA 72 bp GTGGAGATGGCGGCGGGGACGGCGTCCACTCCGTCCTaGACGTCCTCCAGCCCCGGCTCAGCGACGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VEMAAGTASTPS*TSSSPGSATGR
Trigger: TCTGCCCGTCGCTGAGCCGGGGCTGGAGGACGTCAAGGACGGAGTGGACGCCGTCCCCGCCGCCATCTCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp GCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: APSLMSSLMRRASPRMAAHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...AGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: AASPGSTPAFRQDGAVRHRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...GTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGTTCCTGTTGCTCTGCTaGGGGTTCCCTCCGTACCGC +
Preference number: 4 (lower is better)
Translates to: DAPGVPADGGSVQAGLSTFLLLC*GFPPYR
Trigger: GCGGTACGGAGGGAACCCGCAGCAGAGCAACAGGAA...CGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTAGCAGCCCATCCGCATaGCTGTCCCGGTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGSSPSA*LSRCLS
Trigger: GGAGAGGCACCGGGACAGGCATGCGGATGGGCTGCT...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp CGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCCAGGCTGGGCTTGCTaGAGAGGAGCACGACGGGCA +
Preference number: 4 (lower is better)
Translates to: RASPRMAARCRRVSPRSFPGWAC*RGARRA
Trigger: TGCCCGTCGTGCTCCTCTGCAGCAAGCCCAGCCTGG...AAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp GCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTGGCCAGCAGCGCAGGTaGGGCCCTCCTCGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: APSLMSSLMRRASPRMAAGQQRR*GPPRVL
Trigger: TAGAACCCGAGGAGGGCCGCACCTGCGCTGCTGGCC...AGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp CGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCAGCGCCCTCCGCGCTaGACAGGAAGGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RASPRMAARCRRVSPRSFQRPPR*TGRGSS
Trigger: AGAAGAGCCCCTTCCTGTCCAGCGCGGAGGGCGCTG...AAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGCCTCTGAGGTGGAGATaGCGGCGGGGACGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PLADELFDAPGVPADGGSPLRWR*RRGRRP
Trigger: TGGACGCCGTCCCCGCCGCCATCTCCACCTCAGAGG...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCGTCTCCGCTCCCCAGTaGGCGCTGTTCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LFDAPGVPADGGSVQAGLVSAPQ*ALFWGN
Trigger: GTTCCCCCAGAACAGCGCCCACTGGGGAGCGGAGAC...GAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp ACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: TRRISRQHPCFPAGRGCQHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...CTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTGGCACAGCTCGGCCTTaGGGGTGGGCAAGGCGAAAA +
Preference number: 4 (lower is better)
Translates to: RASPRMAARCRRVSPRSFGTARP*GWARRK
Trigger: TTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCC...AAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR TCA 90 bp TTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACCTCCCCTGCAGCACTaGGCGAATCCCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: LMRRASPRMAARCRRVSPPPLQH*ANPRHC
Trigger: GCAGTGTCTGGGATTCGCTCAGTGCTGCAGGGGAGG...TGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp CCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: PAASPGSTPAFRQDGAVRVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...CCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: SPRMAARCRRVSPRSFLLRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...CAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGCGTCCCTGCGCTCCTTaGAGCTCTCCAGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: PLADELFDAPGVPADGGSRPCAP*SSPGRP
Trigger: AGGACGCCCTGGAGAGCTGCAAGGAGCGCAGGGACG...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCGTGCGCGGGCTCCACGCTaGAGTCCGGATCCCCACGGG +
Preference number: 4 (lower is better)
Translates to: QLLRDVVVAPVTGLVQRRARAPR*SPDPHG
Trigger: CCCGTGGGGATCCGGACTCCAGCGTGGAGCCCGCGC...ACGGCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTGCTGCAGCTGCTGGGTaGAGCGCTGAAAGCGGCGTT +
Preference number: 4 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGAAAAG*SAESGV
Trigger: AACGCCGCTTTCAGCGCTCCACCCAGCAGCTGCAGC...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp CGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RASPRMAARCRRVSPRSFPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...AAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR TCA 90 bp TTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCAGCTTGTCTCCGACGCTaGATTCTTCCTCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LMRRASPRMAARCRRVSPACLRR*ILPRGS
Trigger: GGACCCCCGAGGAAGAATTCAGCGTCGGAGACAAGC...TGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp GCTCACTGGTGCAGCCAAAGGGACACGCACAAGCCGTCAGGTCAGCGCGGCATCGGCCCATGGCGCTCCTaGCGAGGGCTCCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: AHWCSQRDTHKPSGQRGIGPWRS*RGLPRG
Trigger: GCCACGAGGGAGCCCTCGTCAGGAGCGCCATGGGCC...GATGCCGCGCTGACCTGACGGCTTGTGCGTGTCCCTTTGGCTGCACCAGTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR TCA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGAGAGGCCGTCCAGGCTaGCCCAGAAGGGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PLADELFDAPGVPADGGSRGRPG*PRRGKL
Trigger: CAGCTTTCCCCTTCTGGGTCAGCCTGGACGGCCTCT...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp CGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGTCGTGCTCCGAGGGCTaGGCGGCTCCGCGACGGCTC +
Preference number: 4 (lower is better)
Translates to: RRPACEVLDVDVCPLADESCSEG*AAPRRL
Trigger: GAGCCGTCGCGGAGCCGCGCAGCCCTCGGAGCACGA...CTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: DAPGVPADGGSVQAGLSTRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...CGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: RTCSQQLLRDVVVAPVTGRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...GCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp ACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGCCAGGCTGGGCTTGCTaGAGAGGAGCACGACGGGCA +
Preference number: 4 (lower is better)
Translates to: TRRISRQHPCFPAGRGCQPGWAC*RGARRA
Trigger: TGCCCGTCGTGCTCCTCTGCAGCAAGCCCAGCCTGG...CTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCAGGCCGTGGCCTTCTGTaGCTCTGGGTTCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LMRRASPRMAARCRRVSPGRGLL*LWVLGL
Trigger: AAGGCCAAGAACCCAGAGCCACAGAAGGCCACGGCC...TGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp GCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCTCCTTCTCTCGTGCTaGGTGGTGCCGTTCCCACGG +
Preference number: 4 (lower is better)
Translates to: APSLMSSLMRRASPRMAALLLSC*VVPFPR
Trigger: CCGTGGGAACGGCACCACCCAGCACGAGAGAAGGAG...AGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp GATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTTGTCGTCTCCAGGTaGCTCCGTGAAAGAGACCTC +
Preference number: 4 (lower is better)
Translates to: DAPGVPADGGSVQAGLSTLVVSR*LRERDL
Trigger: GAGGTCTCTTTCACGGAGCCACCTGGAGACGACAAG...CGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCGCGGCCGTCGCCTGCTaGTCCTCGGAGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QQLLRDVVVAPVTGLVQRAAVAC*SSEVSR
Trigger: CCTGGACACCTCCGAGGACCAGCAGGCGACGGCCGC...GCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCCAGAAGGGGAAAGCTaGGGGCAGACAGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: RASPRMAARCRRVSPRSFPEGES*GQTEGT
Trigger: TGTGCCCTCTGTCTGCCCCCAGCTTTCCCCTTCTGG...AAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGAGCTTTAAGGGCCCATaGGGCTGCCCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PLADELFDAPGVPADGGSSFKGP*GCPGPA
Trigger: TGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCT...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR TCA 90 bp CCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCGTCCACTCCGTCCTTaGCGTCCTCCAGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PHLQPAAASRRRSSPGYRRPLRP*RPPAPA
Trigger: AGCCGGGGCTGGAGGACGTCAAGGACGGAGTGGACG...CCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp AGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGGGCCCATGGCGCTCCTaGCGAGGGCTCCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: RNQHVPGSTAESTPQAPEGPWRS*RGLPRG
Trigger: GCCACGAGGGAGCCCTCGTCAGGAGCGCCATGGGCC...CTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp AGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCGGCACAGCTCGGCCTTaGGGGTGGGCAAGGCGAAAA +
Preference number: 4 (lower is better)
Translates to: RPAASPGSTPAFRQDGAVGTARP*GWARRK
Trigger: TTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCC...GACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp ACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGAGAGGCCGTCCAGGCTaGCCCAGAAGGGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: TRRISRQHPCFPAGRGCQRGRPG*PRRGKL
Trigger: CAGCTTTCCCCTTCTGGGTCAGCCTGGACGGCCTCT...CTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTTCGTGCTCCGAGGGCTaGGCGGCTCCGCGACGGCTC +
Preference number: 4 (lower is better)
Translates to: ARSPRASWSERARWAELSSCSEG*AAPRRL
Trigger: GAGCCGTCGCGGAGCCGCGCAGCCCTCGGAGCACGA...AGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR GCA 90 bp CCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: PAASPGSTPAFRQDGAVRSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...CCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: RRPACEVLDVDVCPLADERMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...CTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RTCSQQLLRDVVVAPVTGRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...GCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp TTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCATCTCGCCTTTCCTGTTaGTCTGCTGCGGGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LMRRASPRMAARCRRVSPSRLSC*SAAGSL
Trigger: GAGGGAACCCGCAGCAGAGCAACAGGAAAGGCGAGA...TGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp GCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTGACGTGTTCAGCTGCTaGTGCAGCTGCTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: APSLMSSLMRRASPRMAADVFSC*CSCWVE
Trigger: CTCCACCCAGCAGCTGCAGCAGCAGCTGAACACGTC...AGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp TTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCGGAGCGTACCAGCCTTaGAGCACCACAACAGGGACT +
Preference number: 4 (lower is better)
Translates to: FDAPGVPADGGSVQAGLSGAYQP*STTTGT
Trigger: AGTCCCTGTTGTGGTGCTGCAAGGCTGGTACGCTCC...GGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTGGAGCGTACCAGCCTTaGAGCACCACAACAGGGACT +
Preference number: 4 (lower is better)
Translates to: RASPRMAARCRRVSPRSFGAYQP*STTTGT
Trigger: AGTCCCTGTTGTGGTGCTGCAAGGCTGGTACGCTCC...AAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp TTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCGGTCAGAGGTCAAGGTaGTGGCAGGGCAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: FDAPGVPADGGSVQAGLSGQRSR*WQGRIL
Trigger: AAGGATCCTGCCCTGCCAGCACCTTGACCTCTGACC...GGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp ACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGCCTCTCAGTGCCCACTaGTCCTGGGCCGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: TRRISRQHPCFPAGRGCQPLSAH*SWAGHN
Trigger: ATTGTGGCCGGCCCAGGAGCAGTGGGCACTGAGAGG...CTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GGAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGGCTGAGACCTCTCAGTaGCCACTGCTCCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GARRAPADVAPCDPSALLAETSQ*PLLLGR
Trigger: CCGGCCCAGGAGCAGTGGGCACTGAGAGGTCTCAGC...CAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCCCAGGCTGGGCTTGCTaGAGAGGAGCACGACGGGCA +
Preference number: 4 (lower is better)
Translates to: RRAPADVAPCDPSALLSCPGWAC*RGARRA
Trigger: TGCCCGTCGTGCTCCTCTGCAGCAAGCCCAGCCTGG...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CCACTGGTCCACGGCACACTGCAGTGCACATGCCCTTCCTGGCCAGAGGCTCCCTGCTCTCCAGGCACCTaGCCCGCCTGCGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: PLVHGTLQCTCPSWPEAPCSPGT*PACEHS
Trigger: GCTGTGCTCGCAGGCGGGGCAGGTGCCTGGAGAGCA...GGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGACCAGCTCCCAGGGGCGCCATaGTCTCCAGGCACCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PACAWQHCREHTPGTRDQLPGAP*SPGTCP
Trigger: GGGGCAGGTGCCTGGAGAGCATGGCGCCCCTGGGAG...CTGGTCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp GGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGCCCTGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GHLLALGEGVAGSDSRQPCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...GGGCTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp TCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGCCTCCTTGTCCAGTTTaGGGACAGCGCCCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: SPRMAARCRRVSPRSFLLPPCPV*GQRPPR
Trigger: GCGCGGAGGGCGCTGTCCCCAAACTGGACAAGGAGG...CAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp TCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGAGGGGGAGCAGGCGCTaGTGGGAGCGGTGGGCACGG +
Preference number: 4 (lower is better)
Translates to: SLTLTSAPSLMSSLMRRARGSRR*WERWAR
Trigger: CCGTGCCCACCGCTCCCACCAGCGCCTGCTCCCCCT...CGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCAGAGGTCAAGGTGCTaGCAGGGCAGGATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGQRSRC*QGRILP
Trigger: AGGAAGGATCCTGCCCTGCCAGCACCTTGACCTCTG...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp GCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACAGCTTTAAGGGCCCATaGGGCTGCCCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AASPGSTPAFRQDGAVRHSFKGP*GCPGPA
Trigger: TGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCT...GTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR CAA 72 bp TTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LTLTSAPSLMSS*MRRASPRMAAR
Trigger: CCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR TCA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGCGTCGGACTTGTCCTTaGAGCCACTCTCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ADELFDAPGVPADGGSVQRRTCP*SHSRSH
Trigger: GTGGCTGCGAGAGTGGCTTCAAGGACAAGTCCGACG...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp TTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCCGGGGCTTCCGGAAGTaGCTTGCAGTTGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: FDAPGVPADGGSVQAGLSRGFRK*LAVAEE
Trigger: TTCTTCAGCAACTGCAAGTCACTTCCGGAAGCCCCG...GGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGAGAGGCCGTCCAGGCTaGCCCAGAAGGGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQRGRPG*PRRGKL
Trigger: CAGCTTTCCCCTTCTGGGTCAGCCTGGACGGCCTCT...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR TCA 90 bp GCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACGGAAGGGTCTCCAACTaGGCAGTCACCAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AASPGSTPAFRQDGAVRHGRVSN*AVTSAA
Trigger: GGCTGCACTGGTGACTGCTCAGTTGGAGACCCTTCC...GTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646838.1
CDS-3UTR GCA 90 bp ACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGTTCCGCTCAGGGCCCTaGTTCTCTGTGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: TRRISRQHPCFPAGRGCQFRSGP*FSVSES
Trigger: GGACTCGGACACAGAGAAGCAGGGCCCTGAGCGGAA...CTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642333.1
ENST00000642695.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGATGAGAAGGGCCACCTaGTGGCGCTCGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PHLQPAAASRRRSSPGYRMRRAT*WRSERG
Trigger: CCCCCTCTCCGAGCGCCAGCAGGTGGCCCTTCTCAT...CCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CACCTCCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTATGAGAAGGGCCACCTaGTGGCGCTCGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: HLRTCSQQLLRDVVVAPVMRRAT*WRSERG
Trigger: CCCCCTCTCCGAGCGCCAGCAGGTGGCCCTTCTCAT...AACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp TGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: CSQQLLRDVVVAPVTGLVRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...CACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCGGAGTCCGTGTTGTTaGCGTCGACTGAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGRSPCC*RRLNWK
Trigger: CTTCCAGTTCAGTCGACGGCAACAACACGGACTCCG...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp CTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCCATCTCATGCCATGGTaGTTCGAGGAGCGTACCAGC +
Preference number: 4 (lower is better)
Translates to: LFDAPGVPADGGSVQAGLHLMPW*FEERTS
Trigger: GCTGGTACGCTCCTCGAAGCACCATGGCATGAGATG...GAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCCCTTGCTGTCCTGCCTaGAACCAGGGGCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: PCFPAGRGCQAHHDLSRPPCCPA*NQGLST
Trigger: CGTGGAGAGCCCCTGGTTGCAGGCAGGACAGCAAGG...GGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTCCAGGCTGGGCTTGCTaGAGAGGAGCACGACGGGCA +
Preference number: 4 (lower is better)
Translates to: HDGHQQMWPRVTPQPCCPPGWAC*RGARRA
Trigger: TGCCCGTCGTGCTCCTCTGCAGCAAGCCCAGCCTGG...AGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTGGGGCCAGCAGCGCAGGTaGGGCCCTCCTCGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: DLSRPPQRLRPLSAHCSWGQQRR*GPPRVL
Trigger: TAGAACCCGAGGAGGGCCGCACCTGCGCTGCTGGCC...CCAGGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CTCTGCTCTCTCTGCCCGCTCGGGTCCACTGCAGCTGAGCGGGTGGGAGAAGCCGCACAGCCTGGCCCCTaGTGCACTCTGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LCSLCPLGSTAAERVGEAAQPGP*CTLLSL
Trigger: CAGAGAGAGCAGAGTGCAGCAGGGGCCAGGCTGTGC...GGCTTCTCCCACCCGCTCAGCTGCAGTGGACCCGAGCGGGCAGAGAGAGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp ACTGGTCCACGGCACACTGCAGTGCACATGCCCTTCCTGGCCAGAGGCTCCCAGGCCTTGGGCTGGCCCTaGCCTGCGTGGGATCTGTGC +
Preference number: 4 (lower is better)
Translates to: TGPRHTAVHMPFLARGSQALGWP*PAWDLC
Trigger: GCACAGATCCCACGCAGGGCAGGGCCAGCCCAAGGC...CTGGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp TTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCATGGTGTTGTGTCCACTaGGCTGTTGGCAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: LMRRASPRMAARCRRVSPWCCVH*AVGRLL
Trigger: GAGGAGTCTGCCAACAGCCCAGTGGACACAACACCA...TGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp CCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGTGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: PAASPGSTPAFRQDGAVRCSARC*QRRAKA
Trigger: CGCCTTTGCACGACGCTGCCAACAACGGGCACTACA...CCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGCCATCGTGGGGGAGTTaGCCACTTTCAGCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: ADELFDAPGVPADGGSVQPSWGS*PLSAAS
Trigger: AGACGCCGCTGAAAGTGGCCAACTCCCCCACGATGG...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp GCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTTGGGAGAGTCGTAGCTaGAGGCAGCAGGAACGCTCT +
Preference number: 4 (lower is better)
Translates to: APSLMSSLMRRASPRMAAWESRS*RQQERS
Trigger: AGAGCGTTCCTGCTGCCTCCAGCTACGACTCTCCCA...AGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGGACAACGGCAGCCGGTaGGCAGTGCAAAGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQDNGSR*AVQSVD
Trigger: GTCGACGCTTTGCACTGCCCACCGGCTGCCGTTGTC...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCCTCCATCTCATGCCATaGTGCTTCGAGGAGCGTACC +
Preference number: 4 (lower is better)
Translates to: LFDAPGVPADGGSVQAGLLHLMP*CFEERT
Trigger: GGTACGCTCCTCGAAGCACCATGGCATGAGATGGAG...GAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCCTGTGCCCCACATCATaGAACCGGCTAGCTACGGGG +
Preference number: 4 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSLCPTS*NRLATG
Trigger: CCCCGTAGCTAGCCGGTTCCATGATGTGGGGCACAG...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCCAGCAATGGCCAGGCTaGGCTTGCTGCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RPAASPGSTPAFRQDGAVQQWPG*ACCRGA
Trigger: TGCTCCTCTGCAGCAAGCCCAGCCTGGCCATTGCTG...GACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp ACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGCAGCAATGGCCAGGCTaGGCTTGCTGCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TRRISRQHPCFPAGRGCQQQWPG*ACCRGA
Trigger: TGCTCCTCTGCAGCAAGCCCAGCCTGGCCATTGCTG...CTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGACATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GTSMCLAALQRAHPRHQRHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...TCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000647238.1
CDS-3UTR TCA 90 bp GCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: ARSPRASWSERARWAELSHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...AGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR TCA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCTTGCTGGGAAACCTGTaGGAGGCCGTCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RRAPADVAPCDPSALLSCLLGNL*EAVQAD
Trigger: GTCAGCCTGGACGGCCTCTCACAGGTTTCCCAGCAA...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GCTGCACTCTGCTCTCTCTGCCCGCTCGGGTCCACTGCAGCTGAGCGGGTGGGAGTCAACACACTGAGCTaGGGCCACTGGTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: AALCSLCPLGSTAAERVGVNTLS*GHWSTA
Trigger: TGCCGTGGACCAGTGGCCTCAGCTCAGTGTGTTGAC...TCCCACCCGCTCAGCTGCAGTGGACCCGAGCGGGCAGAGAGAGCAGAGTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp GAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTTGGGCAGGGCAAGCTGGTCTaGGAGGGCTCGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: EVPGQAGLRGLGGQSCLGQGKLV*EGSVGR
Trigger: TCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTG...CCCAAGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR GCA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: PLADELFDAPGVPADGGSRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGACCAGGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: PACAWQHCREHTPGTRDQVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...CTGGTCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000647238.1
CDS-3UTR GCA 90 bp CAGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: QRRPACEVLDVDVCPLADVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...ATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTATGAGAAGGGCCACCTaGTGGCGCTCGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LQPAAASRRRSSPGYRPRMRRAT*WRSERG
Trigger: CCCCCTCTCCGAGCGCCAGCAGGTGGCCCTTCTCAT...ACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGATGAGAAGGGCCACCTaGTGGCGCTCGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RRPACEVLDVDVCPLADEMRRAT*WRSERG
Trigger: CCCCCTCTCCGAGCGCCAGCAGGTGGCCCTTCTCAT...CTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: ADELFDAPGVPADGGSVQLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: ATRGSPRSSDEDISETRRRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...GCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCGTTCACCTCCGCACCTaGAGCCAGCAGCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: QQLLRDVVVAPVTGLVQRVHLRT*SQQLLR
Trigger: GCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTGAAC...GCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTGGCATCAGGATGCACTaGAGAGTTGTGGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: RASPRMAARCRRVSPRSFGIRMH*RVVGSI
Trigger: AATGGAGCCCACAACTCTGCAGTGCATCCTGATGCC...AAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR GCA 90 bp CTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCGGGCTCCCTCGTGGCTaGCCCAGGACAAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: LKEPACAWQHCREHTPGTGLPRG*PRTSRT
Trigger: GGTCCTGCTTGTCCTGGGGCAGCCACGAGGGAGCCC...GGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp AGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGGGGCTCCCTCGTGGCTaGCCCAGGACAAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: RNQHVPGSTAESTPQAPEGLPRG*PRTSRT
Trigger: GGTCCTGCTTGTCCTGGGGCAGCCACGAGGGAGCCC...CTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCACAGAACCACCCAGATaGCAGGACAGGCCGGATGTG +
Preference number: 4 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSTEPPR*QDRPDV
Trigger: CACATCCGGCCTGTCCTGGCATCTGGGTGGTTCTGT...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTCCTCTCAGTGCCCACTaGTCCTGGGCCGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: HDGHQQMWPRVTPQPCCPPLSAH*SWAGHN
Trigger: ATTGTGGCCGGCCCAGGAGCAGTGGGCACTGAGAGG...AGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCCCACAGAGGTGACCCCTCAGCCTTaGTGTCCTGCCTGCAACCAG +
Preference number: 4 (lower is better)
Translates to: SGRTGLSGTPRPLSTPTEVTPQP*CPACNQ
Trigger: CTGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCAC...CTCTGTGGGGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCACACCTGCCCTCCCCTaGAGCACTGAGCGAATCCCA +
Preference number: 4 (lower is better)
Translates to: RRAPADVAPCDPSALLSCTPALP*STERIP
Trigger: TGGGATTCGCTCAGTGCTGCAGGGGAGGGCAGGTGT...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTGTCCCCAGTCCCAGCTaGTTAGGGGCCACCACACTC +
Preference number: 4 (lower is better)
Translates to: EHDGHQQMWPRVTPQPCCVPSPS*LGATTL
Trigger: GAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGAC...ACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCTGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: RRAPADVAPCDPSALLSCCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCGCTCGCTCTCGGTCGTaGCTCTTCTTGGATGAAGAT +
Preference number: 4 (lower is better)
Translates to: LFDAPGVPADGGSVQAGLARSRS*LFLDED
Trigger: ATCTTCATCCAAGAAGAGCCACGACCGAGAGCGAGC...GAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCCTGTGCCCCACATCATaGAACCGGCTAGCTACGGGG +
Preference number: 4 (lower is better)
Translates to: RRAPADVAPCDPSALLSCLCPTS*NRLATG
Trigger: CCCCGTAGCTAGCCGGTTCCATGATGTGGGGCACAG...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACACCAGAAGGGGAAAGCTaGGGGCAGACAGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: PHLQAAPLLSGRTGLSGTPEGES*GQTEGT
Trigger: TGTGCCCTCTGTCTGCCCCCAGCTTTCCCCTTCTGG...TGTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCAGTGCCCACTGCTCCTaGGCCGGCCACAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: AVQPAKSLTLTSAPSLMSSAHCS*AGHNGH
Trigger: GTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT...GCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR TCA 90 bp ATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: MKTSVRPAASPGSTPAFRHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...CCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: LHGALMKTSVRPAASPGSHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...GCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGTGCGTCTTCCTCTTCTaGGCTCTCCGTCGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQCVFLF*ALRRAL
Trigger: GAGAGCTCGACGGAGAGCTCAGAAGAGGAAGACGCA...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGTCTTGGCCTTGTGCTTaGGGCCTTTTTCGAACTCGG +
Preference number: 4 (lower is better)
Translates to: PLADELFDAPGVPADGGSSWPCA*GLFRTR
Trigger: CCGAGTTCGAAAAAGGCCTCAAGCACAAGGCCAAGA...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCCTCACTCTCATCTGTaGAGATGTCTGCGATGTACC +
Preference number: 4 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGPHSHL*RCLRCT
Trigger: GGTACATCGCAGACATCTTCACAGATGAGAGTGAGG...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp CCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCTCCAGGTGGCTCCGTaGAAGAGACCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PHLQPAAASRRRSSPGYRLQVAP*KRPPGR
Trigger: CCTTCCTGGAGGTCTCTTTCACGGAGCCACCTGGAG...CCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp CACGACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCGGCACAGCTCGGCCTTaGGGGTGGGCAAGGCGAAAA +
Preference number: 4 (lower is better)
Translates to: HDLSRPPQRLRPLSAHCSGTARP*GWARRK
Trigger: TTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCC...GGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp AGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGGACCCCCACAGAGGCTaGGACCTCTCAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: SAVQPAKSLTLTSAPSLMDPHRG*DLSVPT
Trigger: AGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTC...CATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR TCA 90 bp CACGACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCGACCCCCACAGAGGCTaGGACCTCTCAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: HDLSRPPQRLRPLSAHCSDPHRG*DLSVPT
Trigger: AGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTC...GGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp AGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGGACTCAGTGTTCTaGGTTCCCTGCTCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RPAASPGSTPAFRQDGAVRDSVF*VPCSSQ
Trigger: CTGAGACGAGCAGGGAACTCAGAACACTGAGTCCCT...GACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: AASPGSTPAFRQDGAVRHPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...GTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: ADELFDAPGVPADGGSVQLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp ACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: TRRISRQHPCFPAGRGCQRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...CTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CAGGCAAGATGGGCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: QARWARSPRASWSERARWVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...CCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGCCCATCTTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR GCA 90 bp GCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATGAGAAGGGCCACCTaGTGGCGCTCGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ATRGSPRSSDEDISETRRMRRAT*WRSERG
Trigger: CCCCCTCTCCGAGCGCCAGCAGGTGGCCCTTCTCAT...GCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCGTTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: QLLRDVVVAPVTGLVQRRSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...ACGGCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CTTCCCAAAGTCGCCGTCGGACTTGTCCTTGAAGCCACTCTCGCAGCCACACTCCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: LPKVAVGLVLEATLAATLRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...GAGTGTGGCTGCGAGAGTGGCTTCAAGGACAAGTCCGACGGCGACTTTGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp GGGATTCCGTGGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTTCTCCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: GIPWSAMVRDRLQKGPFLRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...GAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR GCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGCCTTTCCTGTTGCTCTaGTGCGGGTTCCCTCCGTAC +
Preference number: 4 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQPFLLL*CGFPPY
Trigger: GTACGGAGGGAACCCGCAGCAGAGCAACAGGAAAGG...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGGCAGGAACGCTCTGCTaGCTGAAGAGCTTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQAGTLC*LKSLSP
Trigger: CGGAGACAAGCTCTTCAGGCAGCAGAGCGTTCCTGC...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp CGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGGTGTTCAGCTGCTGCTaGAGCTGCTGGGTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: RRPACEVLDVDVCPLADEVFSCC*SCWVER
Trigger: GCGCTCCACCCAGCAGCTGCAGCAGCAGCTGAACAC...CTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp TCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCCCACAGAGGGAGCGTACCAGCCTTaGAGCACCACAACAGGGACT +
Preference number: 4 (lower is better)
Translates to: SGRTGLSGTPRPLSTPTEGAYQP*STTTGT
Trigger: AGTCCCTGTTGTGGTGCTGCAAGGCTGGTACGCTCC...CTCTGTGGGGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp CAACACACTGAGCTGAGGCCACTGGTCCACGGCACACTGCAGTGCACATGCCCTGGGCTCCCTCGTGGCTaGCCCAGGACAAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: QHTELRPLVHGTLQCTCPGLPRG*PRTSRT
Trigger: GGTCCTGCTTGTCCTGGGGCAGCCACGAGGGAGCCC...AGGGCATGTGCACTGCAGTGTGCCGTGGACCAGTGGCCTCAGCTCAGTGTGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGGAGTCTATGGTTCTGTaGACTGGCCACACCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PAASPGSTPAFRQDGAVRESMVL*TGHTSW
Trigger: CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC...CCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CACGACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCCCTCTCAGTGCCCACTaGTCCTGGGCCGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: HDLSRPPQRLRPLSAHCSPLSAH*SWAGHN
Trigger: ATTGTGGCCGGCCCAGGAGCAGTGGGCACTGAGAGG...GGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCGCTGAGACCTCTCAGTaGCCACTGCTCCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: ATRGSPRSSDEDISETRRAETSQ*PLLLGR
Trigger: CCGGCCCAGGAGCAGTGGGCACTGAGAGGTCTCAGC...GCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CACGACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCCCTTGCTGTCCTGCCTaGAACCAGGGGCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: HDLSRPPQRLRPLSAHCSPCCPA*NQGLST
Trigger: CGTGGAGAGCCCCTGGTTGCAGGCAGGACAGCAAGG...GGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTGCGAATCCCAGACACTaGAGAGCCTTTTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGANPRH*RAFSSS
Trigger: TGAACTGGAAAAGGCTCTGCAGTGTCTGGGATTCGC...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp CTCTGCTCTCTCTGCCCGCTCGGGTCCACTGCAGCTGAGCGGGTGGGAGAAGCCCGCTTGGTGAGAAACTaGATCAGGGCTTCCCGCCGT +
Preference number: 4 (lower is better)
Translates to: LCSLCPLGSTAAERVGEARLVRN*IRASRR
Trigger: ACGGCGGGAAGCCCTGATGCAGTTTCTCACCAAGCG...GGCTTCTCCCACCCGCTCAGCTGCAGTGGACCCGAGCGGGCAGAGAGAGCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp GAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTTGGGCCTAGGACGGGCTCTTaGCCAGCGCTCTGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: EVPGQAGLRGLGGQSCLGPRTGS*PALCVR
Trigger: TCGGACACAGAGCGCTGGGCAAGAGCCCGTCCTAGG...CCCAAGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR CCA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGAAGCTCTTCCTGCTGTaGTGCTTTAGGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: ADELFDAPGVPADGGSVQKLFLL*CFRAPT
Trigger: GGTGGGTGCCCTAAAGCACCACAGCAGGAAGAGCTT...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp CTTGCTGCAGAGGAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTTGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LAAEEHDGHQQMWPRVTPCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...AGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTCCTCTGCAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GGAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: GARRAPADVAPCDPSALLCSARC*QRRAKA
Trigger: CGCCTTTGCACGACGCTGCCAACAACGGGCACTACA...CAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGTTCTCTCGTGCTGGGTaGTGCCGTTCCCACGGCTCC +
Preference number: 4 (lower is better)
Translates to: SAVQPAKSLTLTSAPSLMFSRAG*CRSHGS
Trigger: GGAGCCGTGGGAACGGCACCACCCAGCACGAGAGAA...CATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCAGAAGGGGAAAGCTaGGGGCAGACAGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: PHLQPAAASRRRSSPGYRPEGES*GQTEGT
Trigger: TGTGCCCTCTGTCTGCCCCCAGCTTTCCCCTTCTGG...CCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp CAGGCAAGATGGGCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGCTTGGGGCCGGGACATaGCAGGTGCCTTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: QARWARSPRASWSERARWLGAGT*QVPSHS
Trigger: GGAGTGGGAAGGCACCTGCCATGTCCCGGCCCCAAG...CCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGCCCATCTTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR TCA 90 bp GCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AVQPAKSLTLTSAPSLMSPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...GCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR TCA 90 bp CGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RRPACEVLDVDVCPLADEPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...CTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR TCA 90 bp CACGACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HDLSRPPQRLRPLSAHCSPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...GGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp GCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: APNAEGTSMCLAALQRAHHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...GTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000647238.1
CDS-3UTR TCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGGTTGTTGCCGTCGACTaGACTGGAAGGTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQVVAVD*TGRCEG
Trigger: TCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAAC...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp TCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCCCACAGAGAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SGRTGLSGTPRPLSTPTERGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...CTCTGTGGGGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RRAPADVAPCDPSALLSCRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTGGTTCCGCTCAGGGCCCTaGTTCTCTGTGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: DLSRPPQRLRPLSAHCSWFRSGP*FSVSES
Trigger: GGACTCGGACACAGAGAAGCAGGGCCCTGAGCGGAA...CCAGGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642333.1
ENST00000642695.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LQPAAASRRRSSPGYRPRSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...ACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTGGTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: DLSRPPQRLRPLSAHCSWSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...CCAGGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCATCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: QPAAASRRRSSPGYRPRASSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...TGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: PHLQPAAASRRRSSPGYRLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...CCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp TCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: SQALRAHGAALGLQDDLGRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...TCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCGTGGAGCGTACCAGCCTTaGAGCACCACAACAGGGACT +
Preference number: 4 (lower is better)
Translates to: QLLRDVVVAPVTGLVQRRGAYQP*STTTGT
Trigger: AGTCCCTGTTGTGGTGCTGCAAGGCTGGTACGCTCC...ACGGCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGTTCCGCTCAGGGCCCTaGTTCTCTTTCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PLADELFDAPGVPADGGSFRSGP*FSFFLL
Trigger: AAGCAAGAAGAAAGAGAAGCAGGGCCCTGAGCGGAA...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp ACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCTGTGCCTGGCAGCACTaGAGAGAGCACACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TLKEPACAWQHCREHTPGCAWQH*REHTPG
Trigger: GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACA...GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp ACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGAAACTCGCTTTCCTGTaGCCCACATCATGGAACCGG +
Preference number: 4 (lower is better)
Translates to: TRRISRQHPCFPAGRGCQKLAFL*PTSWNR
Trigger: CCGGTTCCATGATGTGGGGCACAGGAAAGCGAGTTT...CTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCGAGTCTATGGTTCTGTaGACTGGCCACACCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RPAASPGSTPAFRQDGAVESMVL*TGHTSW
Trigger: CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC...GACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CACGACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCGTGACCCCTCAGCCTTaGTGTCCTGCCTGCAACCAG +
Preference number: 4 (lower is better)
Translates to: HDLSRPPQRLRPLSAHCSVTPQP*CPACNQ
Trigger: CTGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCAC...GGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAATCTGGCCAGCAGCGCAGGTaGGGCCCTCCTCGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: ALRAHGAALGLQDDLGQSGQQRR*GPPRVL
Trigger: TAGAACCCGAGGAGGGCCGCACCTGCGCTGCTGGCC...AGATTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCTGCTCTCCAGGCACCTaGCCCGCCTGCGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: EGAKHLTLKEPACAWQHCCSPGT*PACEHS
Trigger: GCTGTGCTCGCAGGCGGGGCAGGTGCCTGGAGAGCA...GCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp ACTGGTCCACGGCACACTGCAGTGCACATGCCCTTCCTGGCCAGAGGCTCCCAGCCCCACACACGTGAGTaGCTTGGGACCCTCGTCAAC +
Preference number: 4 (lower is better)
Translates to: TGPRHTAVHMPFLARGSQPHTRE*LGTLVN
Trigger: GTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGG...CTGGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp TCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTGGTGTTGTGTCCACTaGGCTGTTGGCAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: SPRMAARCRRVSPRSFLLWCCVH*AVGRLL
Trigger: GAGGAGTCTGCCAACAGCCCAGTGGACACAACACCA...CAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp CAGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATCTGTCCGCCAGTGCTTaGTGTGCTGGTCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QRRPACEVLDVDVCPLADLSASA*CAGLCG
Trigger: GCCACACAGACCAGCACACCAAGCACTGGCGGACAG...ATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCAGTGCCCACTGCTCCTaGGCCGGCCACAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: HGALMKTSVRPAASPGSTSAHCS*AGHNGH
Trigger: GTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT...GGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCGGGCACCAGCAGATGTaGCCCCGTGTGACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: HGALMKTSVRPAASPGSTGHQQM*PRVTPQ
Trigger: CTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCC...GGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTGGCAGCAATGGCCAGGCTaGGCTTGCTGCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: DLSRPPQRLRPLSAHCSWQQWPG*ACCRGA
Trigger: TGCTCCTCTGCAGCAAGCCCAGCCTGGCCATTGCTG...CCAGGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CTCTGCTCTCTCTGCCCGCTCGGGTCCACTGCAGCTGAGCGGGTGGGAGAAGCCCTGCAGCTGAGCGGGTaGGAGAAGCCTCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: LCSLCPLGSTAAERVGEALQLSG*EKPLQL
Trigger: AAGTTGAAGAGGCTTCTCCCACCCGCTCAGCTGCAG...GGCTTCTCCCACCCGCTCAGCTGCAGTGGACCCGAGCGGGCAGAGAGAGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp CAGGCAAGATGGGCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGTGGGCAGAGCTGTCTTaGGGCCGGGACATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QARWARSPRASWSERARWWAELS*GRDMAG
Trigger: ACCTGCCATGTCCCGGCCCCAAGACAGCTCTGCCCA...CCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGCCCATCTTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR CCA 90 bp GCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTTCTGAGAGGGCTCGGTaGGCAGAGCTGTCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: ARSPRASWSERARWAELSSERAR*AELSWG
Trigger: GCCCCAAGACAGCTCTGCCCACCGAGCCCTCTCAGA...AGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR TCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGCTGCGATTCCATAGCTaGAAGTCAGTGCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQLRFHS*KSVLTR
Trigger: CCTCGTCAGCACTGACTTTCAGCTATGGAATCGCAG...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000643964.1
CDS-3UTR TCA 90 bp TCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGCTGCGATTCCATAGCTaGAAGTCAGTGCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: SPRMAARCRRVSPRSFLLLRFHS*KSVLTR
Trigger: CCTCGTCAGCACTGACTTTCAGCTATGGAATCGCAG...CAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000643964.1
ENST00000645278.1
CDS-3UTR TCA 90 bp GGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGACCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GTSMCLAALQRAHPRHQRPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...TCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp GTGAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: VRNCIRASRRVLLTSPHTHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...CGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567736.6
ENST00000647238.1
CDS-3UTR TCA 90 bp CTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: LFDAPGVPADGGSVQAGLFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...GAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR TCA 90 bp GCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCAGTATAGCCTTATCTaGCTTCTGCTTGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: APSLMSSLMRRASPRMAAQYSLI*LLLGVL
Trigger: GAGGACTCCAAGCAGAAGTCAGATAAGGCTATACTG...AGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp TCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGGAACGCTCTGCTGCCTaGAGAGCTTGTCTCCGACGC +
Preference number: 4 (lower is better)
Translates to: SLTLTSAPSLMSSLMRRAERSAA*RACLRR
Trigger: GCGTCGGAGACAAGCTCTTCAGGCAGCAGAGCGTTC...CGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp CAGGAAAAGACTGAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCGGCCCATGGCGCTCCTaGCGAGGGCTCCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: QEKTEGAKHLTLKEPACAGPWRS*RGLPRG
Trigger: GCCACGAGGGAGCCCTCGTCAGGAGCGCCATGGGCC...GGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTCAGTCTTTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp TTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCAGGCCCATGGCGCTCCTaGCGAGGGCTCCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: LSPLALGKVWHSEFQEVPGPWRS*RGLPRG
Trigger: GCCACGAGGGAGCCCTCGTCAGGAGCGCCATGGGCC...TGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp AGCCTTGCTGTCCTGCCTGCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACGGCACAGCTCGGCCTTaGGGGTGGGCAAGGCGAAAA +
Preference number: 4 (lower is better)
Translates to: SLAVLPATRGSPRSSDEDGTARP*GWARRK
Trigger: TTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCC...GTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGCAGGCAGGACAGCAAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CTCAGCAGGAAAGGCTCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGTTGCTGGGAAACCTGTaGGAGGCCGTCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LSRKGSQALRAHGAALGLLLGNL*EAVQAD
Trigger: GTCAGCCTGGACGGCCTCTCACAGGTTTCCCAGCAA...CAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGAGCCTTTCCTGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GTCAAGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTGCTGGACCCCCACAGAGGCTaGGACCTCTCAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: VKVLAGQDPSFPPSWGLLDPHRG*DLSVPT
Trigger: AGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTC...CAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCGACCCCCACAGAGGCTaGGACCTCTCAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: HGALMKTSVRPAASPGSTDPHRG*DLSVPT
Trigger: AGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTC...GGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTCCCCTGCAGCACTaGGCGAATCCCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: HGALMKTSVRPAASPGSTPPLQH*ANPRHC
Trigger: GCAGTGTCTGGGATTCGCTCAGTGCTGCAGGGGAGG...GGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: QQLLRDVVVAPVTGLVQRPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...GCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CTTGCTGCAGAGGAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: LAAEEHDGHQQMWPRVTPLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...AGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTCCTCTGCAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: RTCSQQLLRDVVVAPVTGLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...GCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp TCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGAGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SQALRAHGAALGLQDDLGVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...TCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CTGCCTGCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LPATRGSPRSSDEDISETVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...GGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TGGGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTGCCTACCTCACCGTAATGAGAAGGGCCACCTaGTGGCGCTCGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: WGSQHGHLGGHYPAYLTVMRRAT*WRSERG
Trigger: CCCCCTCTCCGAGCGCCAGCAGGTGGCCCTTCTCAT...TACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: CSQQLLRDVVVAPVTGLVLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...CACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: VLCTGHTSWCYLIPDEGGRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...CCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCGTTCACCTCCGCACCTaGAGCCAGCAGCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: HGALMKTSVRPAASPGSTVHLRT*SQQLLR
Trigger: GCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTGAAC...GGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: PCFPAGRGCQAHHDLSRPLLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...GGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CTTCCCAAAGTCGCCGTCGGACTTGTCCTTGAAGCCACTCTCGCAGCCACACTCTCTCGTGCTGGGTGGTaGCGTTCCCACGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPKVAVGLVLEATLAATLSRAGW*RSHGSR
Trigger: CCTGGAGCCGTGGGAACGGCACCACCCAGCACGAGA...GAGTGTGGCTGCGAGAGTGGCTTCAAGGACAAGTCCGACGGCGACTTTGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp AGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGCTTCTCCTTCTCTCGTaGTGGGTGGTGCCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SAVQPAKSLTLTSAPSLMLLLLS*WVVPFP
Trigger: TGGGAACGGCACCACCCAGCACGAGAGAAGGAGAAG...CATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp TGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGGGCTCCTTGTCCTTCTaGCTCTCAGGGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CSQQLLRDVVVAPVTGLVGSLSF*LSGCCL
Trigger: CAAGCAGCACCCTGAGAGGCAGAAGGACAAGGAGCC...CACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp CAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCGTGCAGCAGGAACGCTCTaGTGCCTGAAGAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: QLLRDVVVAPVTGLVQRRAAGTL*CLKSLS
Trigger: AGACAAGCTCTTCAGGCAGCAGAGCGTTCCTGCTGC...ACGGCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp TGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTAGAGGCAAGCGCCTaGTCGGAGGGGTGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: WRLGAGGSLHARFSCSLYLEASA*SEGWAH
Trigger: GTGGGCCCACCCCTCCGAGCAGGCGCTTGCCTCTAG...ATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp AGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGGAGACAGGCCGCGGCTaGCGTCCAGGAAGCTATTTT +
Preference number: 4 (lower is better)
Translates to: SAVQPAKSLTLTSAPSLMETGRG*RPGSYF
Trigger: AAAATAGCTTCCTGGACGGCAGCCGCGGCCTGTCTC...CATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp CACCTCCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTCATCTCATGCCATGGTaGTTCGAGGAGCGTACCAGC +
Preference number: 4 (lower is better)
Translates to: HLRTCSQQLLRDVVVAPVHLMPW*FEERTS
Trigger: GCTGGTACGCTCCTCGAAGCACCATGGCATGAGATG...AACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTCATCTCATGCCATGGTaGTTCGAGGAGCGTACCAGC +
Preference number: 4 (lower is better)
Translates to: HDGHQQMWPRVTPQPCCPHLMPW*FEERTS
Trigger: GCTGGTACGCTCCTCGAAGCACCATGGCATGAGATG...AGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp CAGGTCAGCGCGGCATCAGGATGCACTGCAGAGTTGTGGGCTCCATTTCCATCTGGGCTCCCTCGTGGCTaGCCCAGGACAAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: QVSAASGCTAELWAPFPSGLPRG*PRTSRT
Trigger: GGTCCTGCTTGTCCTGGGGCAGCCACGAGGGAGCCC...AGATGGAAATGGAGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCTGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR GCA 90 bp CCCACCCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTCCAGGCAGCACCCCTaGTTTCCGGCAGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: PTPPEQAVSQVSSLRPRHSRQHP*FPAGRG
Trigger: GCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGA...GTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GCTGCTCACGTGCCAGCACCCACTGGCCAAGCATCCTCCGGCAGGACCCAAGTCTTCAGAGGCCGACCCTaGTTTCCAGAGACTCACGAG +
Preference number: 4 (lower is better)
Translates to: AAHVPAPTGQASSGRTQVFRGRP*FPETHE
Trigger: CTCGTGAGTCTCTGGAAAGCAGGGTCGGCCTCTGAA...GACTTGGGTCCTGCCGGAGGATGCTTGGCCAGTGGGTGCTGGCACGTGAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp GCACAGCTCGGCCTTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCATGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: AQLGLEGGQGENSLSCAPCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...TGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCTGGTGTTGTGTCCACTaGGCTGTTGGCAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: QQLLRDVVVAPVTGLVQRWCCVH*AVGRLL
Trigger: GAGGAGTCTGCCAACAGCCCAGTGGACACAACACCA...GCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp CTTGCTGCAGAGGAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTTGGTGTTGTGTCCACTaGGCTGTTGGCAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: LAAEEHDGHQQMWPRVTPWCCVH*AVGRLL
Trigger: GAGGAGTCTGCCAACAGCCCAGTGGACACAACACCA...AGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTCCTCTGCAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCTGCCGTCGACTGAACTaGAAGGTGCGAAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: RTCSQQLLRDVVVAPVTGCRRLN*KVRRMV
Trigger: CACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCA...GCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTCCAGTGGGCCGGCTCTaGTCAGGCCTGGGGGACGCA +
Preference number: 4 (lower is better)
Translates to: RLGAGGSLHARFSCSLYLPVGRL*SGLGDA
Trigger: TGCGTCCCCCAGGCCTGACCAGAGCCGGCCCACTGG...AAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCGTCTTCCATCGAGGGTaGCATGGGAGAGTCGTAGCT +
Preference number: 4 (lower is better)
Translates to: QQLLRDVVVAPVTGLVQRVFHRG*HGRVVA
Trigger: AGCTACGACTCTCCCATGCCACCCTCGATGGAAGAC...GCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp AGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGGGGGCAGAAACGCTTTaGGGACTCGGGGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: SAVQPAKSLTLTSAPSLMGAETL*GLGESL
Trigger: CAGAGATTCCCCGAGTCCCCAAAGCGTTTCTGCCCC...CATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CTGTGCTCACTGGTGCAGCCAAAGGGACACGCACAAGCCGTCAGGTCAGCGCGGGCAGCTCAGCGGTTCTaGGATTCCGTGGTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: LCSLVQPKGHAQAVRSARAAQRF*DSVVGN
Trigger: ATTGCCGACCACGGAATCCCAGAACCGCTGAGCTGC...CCGCGCTGACCTGACGGCTTGTGCGTGTCCCTTTGGCTGCACCAGTGAGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
CDS-3UTR CCA 90 bp CGCCTGCCACTGTGCTCACTGGTGCAGCCAAAGGGACACGCACAAGCCGTCAGGCAGAGGTCAAGGTGCTaGCAGGGCAGGATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLPLCSLVQPKGHAQAVRQRSRC*QGRILP
Trigger: AGGAAGGATCCTGCCCTGCCAGCACCTTGACCTCTG...CCTGACGGCTTGTGCGTGTCCCTTTGGCTGCACCAGTGAGCACAGTGGCAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR CCA 90 bp GAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCACTGTGCCCCACATCATaGAACCGGCTAGCTACGGGG +
Preference number: 4 (lower is better)
Translates to: EDISETRRISRQHPCFPALCPTS*NRLATG
Trigger: CCCCGTAGCTAGCCGGTTCCATGATGTGGGGCACAG...TGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GCACAGCTCGGCCTTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCACCAGAAGGGGAAAGCTaGGGGCAGACAGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: AQLGLEGGQGENSLSCAPPEGES*GQTEGT
Trigger: TGTGCCCTCTGTCTGCCCCCAGCTTTCCCCTTCTGG...TGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACACTGGCCACACCTCTTaGTGTTACCTCATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: AASPGSTPAFRQDGAVRHTGHTS*CYLIPD
Trigger: GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGT...GTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TGGGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTGCCTACCTCACCGTAAGTGCCCACTGCTCCTaGGCCGGCCACAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: WGSQHGHLGGHYPAYLTVSAHCS*AGHNGH
Trigger: GTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT...TACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGAGGGCACCAGCAGATGTaGCCCCGTGTGACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQALRAHGAALGLQDDLGGHQQM*PRVTPQ
Trigger: CTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCC...TCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAAGGGCACCAGCAGATGTaGCCCCGTGTGACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QALRAHGAALGLQDDLGQGHQQM*PRVTPQ
Trigger: CTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCC...TTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCACAACACGGGCATCTTaGGGGCCATTATCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: RRAPADVAPCDPSALLSCTTRAS*GPLSCL
Trigger: TAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGT...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCCATCATGGGGGCTGCTaGCAGAATTCAGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSHHGGC*QNSVSC
Trigger: GCAAGAAACTGAATTCTGCCAGCAGCCCCCATGATG...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACATCCTTTCCTCCATCATaGGGGCTGCTGGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: PHLQAAPLLSGRTGLSGTSFPPS*GLLAEF
Trigger: GAATTCTGCCAGCAGCCCCCATGATGGAGGAAAGGA...TGTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGACCAGGGGGAGACTCTTCCCTaGAAGGTGACTTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PACAWQHCREHTPGTRDQGETLP*KVTWLS
Trigger: GGACAGCCAAGTCACCTTCCAGGGAAGAGTCTCCCC...CTGGTCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp GCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTGCAGGGCAGGCAAGATaGGCTAGAAGTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ARSPRASWSERARWAELSAGQAR*ARSPRA
Trigger: TGCCCTGGGACTTCTAGCCCATCTTGCCTGCCCTGC...AGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR TCA 90 bp GTCAAGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTGCTGCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VKVLAGQDPSFPPSWGLLPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...CAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp AGGTCAGCGCGGCATCAGGATGCACTGCAGAGTTGTGGGCTCCATTTCCATCTTCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: RSARHQDALQSCGLHFHLHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...AAGATGGAAATGGAGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCTGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR TCA 90 bp GGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGCCCTTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: GHLLALGEGVAGSDSRQPFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...GGGCTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR TCA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGTGGCCTCTCCCATCTTaGACCCGCTCCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: EVLDVDVCPLADELFDAPWPLPS*TRSPCS
Trigger: GCTGCATGGGGAGCGGGTTCAAGATGGGAGAGGCCA...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp CTTCCCAAAGTCGCCGTCGGACTTGTCCTTGAAGCCACTCTCGCAGCCACACTCGCTTCGCCTTCTCCTTaGGCTTGGGGTCTCCGGACC +
Preference number: 4 (lower is better)
Translates to: LPKVAVGLVLEATLAATLASPSP*AWGLRT
Trigger: GGTCCGGAGACCCCAAGCTCAAGGAGAAGGCGAAGC...GAGTGTGGCTGCGAGAGTGGCTTCAAGGACAAGTCCGACGGCGACTTTGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp CGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCCACGTATATGTCACTaGGATCACGATTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: RASPRMAARCRRVSPRSFPRICH*DHDSFG
Trigger: TCCAAAAGAATCGTGATCTCAGTGACATATACGTGG...AAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR TCA 90 bp CCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACACAGAGACAACCATGGTaGCACAGCTCTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PHLQAAPLLSGRTGLSGTQRQPW*HSSFQL
Trigger: CAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTG...TGTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp TCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCCCACAGAGCAGAGACAACCATGGTaGCACAGCTCTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SGRTGLSGTPRPLSTPTEQRQPW*HSSFQL
Trigger: CAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTG...CTCTGTGGGGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCTTGCTGGGAAACCTGTaGGAGGCCGTCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LHGALMKTSVRPAASPGSLLGNL*EAVQAD
Trigger: GTCAGCCTGGACGGCCTCTCACAGGTTTCCCAGCAA...GCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGCCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PLADELFDAPGVPADGGSPLSKA*VYGSVH
Trigger: GTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGG...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR TCA 90 bp TGGGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTGCCTACCTCACCGTACCTCCCCTGCAGCACTaGGCGAATCCCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: WGSQHGHLGGHYPAYLTVPPLQH*ANPRHC
Trigger: GCAGTGTCTGGGATTCGCTCAGTGCTGCAGGGGAGG...TACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp ACTGGTCCACGGCACACTGCAGTGCACATGCCCTTCCTGGCCAGAGGCTCCCAGGAGATAGTGTGGAAGTaGCTGTGGCTCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TGPRHTAVHMPFLARGSQEIVWK*LWLWSC
Trigger: GCAGGACCAGAGCCACAGTCACTTCCACACTATCTC...CTGGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR TCA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCGAGCTTTCATCACGGTaGCTGCTGTGCTACATACAC +
Preference number: 4 (lower is better)
Translates to: RRAPADVAPCDPSALLSCELSSR*LLCYIH
Trigger: GTGTATGTAGCACAGCAGTCACCGTGATGAAAGCTC...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642333.1
CDS-3UTR GCA 90 bp TCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGTCGTGCTCCGAGGGCTaGGCGGCTCCGCGACGGCTC +
Preference number: 4 (lower is better)
Translates to: SMVLCTGHTSWCYLIPDESCSEG*AAPRRL
Trigger: GAGCCGTCGCGGAGCCGCGCAGCCCTCGGAGCACGA...CTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642695.1
ENST00000643964.1
CDS-3UTR GCA 90 bp GCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: AVQPAKSLTLTSAPSLMSPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...GCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: LQPAAASRRRSSPGYRPRPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...ACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCACTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: QPAAASRRRSSPGYRPRALFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...TGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTGGCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: DLSRPPQRLRPLSAHCSWLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...CCAGGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LQPAAASRRRSSPGYRPRRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...ACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp AGTGCCCACTGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SAHCSWAGHNGHFLKLESVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...AGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: VLCTGHTSWCYLIPDEGGVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...CCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCTTCCGCTCAGGGCCCTaGTTCTCTGTGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: HGALMKTSVRPAASPGSTFRSGP*FSVSES
Trigger: GGACTCGGACACAGAGAAGCAGGGCCCTGAGCGGAA...GGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642333.1
ENST00000642695.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCACATCATGGAACCGATGAGAAGGGCCACCTaGTGGCGCTCGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LRVGKAKTRFPVPHIMEPMRRAT*WRSERG
Trigger: CCCCCTCTCCGAGCGCCAGCAGGTGGCCCTTCTCAT...CGGTTCCATGATGTGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCGTTGCCTCTCAGGGTGCTaGTTGTCAGAAGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: QLLRDVVVAPVTGLVQRRCLSGC*LSEDFL
Trigger: CAGGAAGTCTTCTGACAAGCAGCACCCTGAGAGGCA...ACGGCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp CGTGGCCTTCTGTGGCTCTGGGTTCTTGGCCTTGTGCTTGAGGCCTTTTTCGAAGTCAGCCCCGGCTCCTaGCCTCGGTCCGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RGLLWLWVLGLVLEAFFEVSPGS*PRSVKL
Trigger: CAGCTTCACGGACCGAGGGCAGGAGCCGGGGCTGAC...TTCGAAAAAGGCCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp AGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGAGCGCGGCATCAGGATaGACTGCAGAGTTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RNQHVPGSTAESTPQAPESAASG*TAELWA
Trigger: AGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCT...CTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR GCA 90 bp CCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGACCAGAACGATGCAGACACCTaGTGGTTCTTCCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PACAWQHCREHTPGTRDQNDADT*WFFPRQ
Trigger: CTGCCTCGGGAAGAACCAGCAGGTGTCTGCATCGTT...CTGGTCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR GCA 90 bp GAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTGAGTCTATGGTTCTGTaGACTGGCCACACCTCTTGG +
Preference number: 4 (lower is better)
Translates to: EHDGHQQMWPRVTPQPCCESMVL*TGHTSW
Trigger: CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC...ACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAATCTCCTCTCAGTGCCCACTaGTCCTGGGCCGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: ALRAHGAALGLQDDLGQSPLSAH*SWAGHN
Trigger: ATTGTGGCCGGCCCAGGAGCAGTGGGCACTGAGAGG...AGATTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGTCCAGGCAGCACCCCTaGTTTCCGGCAGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: PTGTSRFSSELFKAKALWSRQHP*FPAGRG
Trigger: GCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGA...CCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGGCGAATCCCAGACACTaGAGAGCCTTTTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQANPRH*RAFSSS
Trigger: TGAACTGGAAAAGGCTCTGCAGTGTCTGGGATTCGC...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp CTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACACCTGCCCTCCCCTaGAGCACTGAGCGAATCCCA +
Preference number: 4 (lower is better)
Translates to: LHGALMKTSVRPAASPGSTPALP*STERIP
Trigger: TGGGATTCGCTCAGTGCTGCAGGGGAGGGCAGGTGT...GCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CCTCGGGTTCTAACCTCTCCTGCTTCTGGCATCTCTCAGACTCAGCAGGAAAGGGGCCAGCAGCGCAGGTaGGGCCCTCCTCGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: PRVLTSPASGISQTQQERGQQRR*GPPRVL
Trigger: TAGAACCCGAGGAGGGCCGCACCTGCGCTGCTGGCC...CCTTTCCTGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTTAGAACCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AGCGGATACGAGCCTTTCATAGATGGCACTTGCTGGGAAACCTGTGAGAGGCCGGGCCAGCAGCGCAGGTaGGGCCCTCCTCGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: SGYEPFIDGTCWETCERPGQQRR*GPPRVL
Trigger: TAGAACCCGAGGAGGGCCGCACCTGCGCTGCTGGCC...CGGCCTCTCACAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCGTATCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCCCACAGAGCTCCATCATGGGGGCTaGTGGCAGAATTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SGRTGLSGTPRPLSTPTELHHGG*WQNSVS
Trigger: AGAAACTGAATTCTGCCAGCAGCCCCCATGATGGAG...CTCTGTGGGGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCGAACTCTTCTCCCGCTaGATATCACCGGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: RRAPADVAPCDPSALLSCELFSR*ISPGFK
Trigger: TTTGAACCCCGGTGATATGCAGCGGGAGAAGAGTTC...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642333.1
CDS-3UTR GCA 90 bp ACCTGTGTGGGGTGCGTGGGGTCTGCTACACGCTTGGTGAGAAACTGCATCAGGGCACAGCCTGGCCCCTaGTGCACTCTGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TCVGCVGSATRLVRNCIRAQPGP*CTLLSL
Trigger: CAGAGAGAGCAGAGTGCAGCAGGGGCCAGGCTGTGC...CCTGATGCAGTTTCTCACCAAGCGTGTAGCAGACCCCACGCACCCCACACAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CCGCCGTGTGTTGCTAACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCACACGGCACACTGCAGTaGACATGCCCTTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PPCVANIPTHVSALGPSSHGTLQ*TCPSWP
Trigger: TGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTG...TGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACACGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp ACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCGGGGTGCGTGGGGTCTaGTACACGCTTGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: TLKEPACAWQHCREHTPGGVRGV*YTLGEK
Trigger: TTTCTCACCAAGCGTGTAGCAGACCCCACGCACCCC...GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp GCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCAAGCTCTTCCTGCTGTaGTGCTTTAGGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: AVQPAKSLTLTSAPSLMSKLFLL*CFRAPT
Trigger: GGTGGGTGCCCTAAAGCACCACAGCAGGAAGAGCTT...GCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp CTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCTGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LHGALMKTSVRPAASPGSCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...GCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCTTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GCACAGCTCGGCCTTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCATGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: AQLGLEGGQGENSLSCAPCSARC*QRRAKA
Trigger: CGCCTTTGCACGACGCTGCCAACAACGGGCACTACA...TGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTCCTTTCTCCTGTCTCTaGGCTCCTTGTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LQPAAASRRRSSPGYRPRPFSCL*APCPSA
Trigger: GGCAGAAGGACAAGGAGCCCAGAGACAGGAGAAAGG...ACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp TGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGGCATCCTCTCGAAGCTaGTCATCATCAGGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: CSQQLLRDVVVAPVTGLVASSRS*SSSGRR
Trigger: ACGGCGACCTGATGATGACCAGCTTCGAGAGGATGC...CACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp AACAGGAGGTTCACCATCGTGGGGGAGTTGGCCACTTTCAGCGGCGTCTCGCCTCCATCGAGGGTGGCATaGGAGAGTCGTAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NRRFTIVGELATFSGVSPPSRVA*ESRSWR
Trigger: CCTCCAGCTACGACTCTCCCATGCCACCCTCGATGG...AGGCGAGACGCCGCTGAAAGTGGCCAACTCCCCCACGATGGTGAACCTCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCCATCTCATGCCATaGTGCTTCGAGGAGCGTACC +
Preference number: 4 (lower is better)
Translates to: RRPACEVLDVDVCPLADELHLMP*CFEERT
Trigger: GGTACGCTCCTCGAAGCACCATGGCATGAGATGGAG...CTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp AGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGCTCCATCTCATGCCATaGTGCTTCGAGGAGCGTACC +
Preference number: 4 (lower is better)
Translates to: SAVQPAKSLTLTSAPSLMLHLMP*CFEERT
Trigger: GGTACGCTCCTCGAAGCACCATGGCATGAGATGGAG...CATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp GCCATGGTGCTTCGAGGAGCGTACCAGCCTTGCAGCACCACAACAGGGACTGGGTGCCACTGTGCTCACTaGTGCAGCCAAAGGGACACG +
Preference number: 4 (lower is better)
Translates to: AMVLRGAYQPCSTTTGTGCHCAH*CSQRDT
Trigger: CGTGTCCCTTTGGCTGCACCAGTGAGCACAGTGGCA...CCCAGTCCCTGTTGTGGTGCTGCAAGGCTGGTACGCTCCTCGAAGCACCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR CCA 90 bp AGAGGGCACAGCTCGGCCTTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCTGTGCCCCACATCATaGAACCGGCTAGCTACGGGG +
Preference number: 4 (lower is better)
Translates to: RGHSSALRVGKAKTRFPVLCPTS*NRLATG
Trigger: CCCCGTAGCTAGCCGGTTCCATGATGTGGGGCACAG...CACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCCCACAGAGACTGGCCACACCTCTTaGTGTTACCTCATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SGRTGLSGTPRPLSTPTETGHTS*CYLIPD
Trigger: GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGT...CTCTGTGGGGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCACATCATGGAACCGAGTGCCCACTGCTCCTaGGCCGGCCACAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRVGKAKTRFPVPHIMEPSAHCS*AGHNGH
Trigger: GTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT...CGGTTCCATGATGTGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AGTGCCCACTGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTGGGCACCAGCAGATGTaGCCCCGTGTGACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SAHCSWAGHNGHFLKLESGHQQM*PRVTPQ
Trigger: CTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCC...AGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCACAACACGGGCATCTTaGGGGCCATTATCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: QQLLRDVVVAPVTGLVQRTTRAS*GPLSCL
Trigger: TAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGT...GCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGCATCATGGGGGCTGCTaGCAGAATTCAGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQHHGGC*QNSVSC
Trigger: GCAAGAAACTGAATTCTGCCAGCAGCCCCCATGATG...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
3UTR CAA 72 bp TCGTGCAGCGCCGTCCAGCCTGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: SCSAVQPAKSLT*TSAPSLMSSLM
Trigger: CATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCTGCACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR TCA 90 bp ACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGGCTCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: TGTSRFSSELFKAKALWAHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...AGCCCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCCATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp TCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGATTGCTGGGAAACCTGTaGGAGGCCGTCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SQALRAHGAALGLQDDLGLLGNL*EAVQAD
Trigger: GTCAGCCTGGACGGCCTCTCACAGGTTTCCCAGCAA...TCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp AGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCCCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: RPAASPGSTPAFRQDGAVPLSKA*VYGSVH
Trigger: GTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGG...GACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CTGAATGTGGTGGCTCTTAGGGTAACCCCAGAATCCTCACTGCGGCAACAAGACCGGGTCCACTGCAGCTaGGCGGGTGGGAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LNVVALRVTPESSLRQQDRVHCS*AGGRSL
Trigger: GAGGCTTCTCCCACCCGCTCAGCTGCAGTGGACCCG...GTCTTGTTGCCGCAGTGAGGATTCTGGGGTTACCCTAAGAGCCACCACATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR TCA 90 bp CTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCACGGGTCCACTGCAGCTaGGCGGGTGGGAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LHTLVASSTGQGLAFRVPRVHCS*AGGRSL
Trigger: GAGGCTTCTCCCACCCGCTCAGCTGCAGTGGACCCG...TGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp CACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCACATCCCCACACACGTaGGTGCCTTGGGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: HLTLKEPACAWQHCREHTTSPHT*VPWDPR
Trigger: ACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGT...GGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCTCGTGCTCCGAGGGCTaGGCGGCTCCGCGACGGCTC +
Preference number: 4 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCSCSEG*AAPRRL
Trigger: GAGCCGTCGCGGAGCCGCGCAGCCCTCGGAGCACGA...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000642695.1
ENST00000643964.1
CDS-3UTR GCA 90 bp GCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTTCATCATCAACCGTCTaGGATTCCATAGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: APSLMSSLMRRASPRMAASSSTV*DSIAES
Trigger: ACTTTCAGCTATGGAATCGCAGACGGTTGATGATGA...AGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp ACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: TLKEPACAWQHCREHTPGPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000647238.1
CDS-3UTR GCA 90 bp GCACAGCTCGGCCTTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCACCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: AQLGLEGGQGENSLSCAPPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...TGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: ARSPRASWSERARWAELSPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...AGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR GCA 90 bp AGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: RNQHVPGSTAESTPQAPELFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...CTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000647238.1
CDS-3UTR GCA 90 bp GCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: ARSPRASWSERARWAELSLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...AGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR GCA 90 bp GCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: ARSPRASWSERARWAELSRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...AGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR GCA 90 bp TTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGTGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: FCALATPLGVTSFQTRVGVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...ACCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp AGGAGCCGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: RSRQNSRLLSEAPGTNMTVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...CGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567736.6
ENST00000647238.1
CDS-3UTR GCA 90 bp GCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAATCTTTCCGCTCAGGGCCCTaGTTCTCTGTGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: ALRAHGAALGLQDDLGQSFRSGP*FSVSES
Trigger: GGACTCGGACACAGAGAAGCAGGGCCCTGAGCGGAA...AGATTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642695.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: EVLDVDVCPLADELFDAPSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp ATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: MVLCTGHTSWCYLIPDEGRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGGTTCACCTCCGCACCTaGAGCCAGCAGCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: VLCTGHTSWCYLIPDEGGVHLRT*SQQLLR
Trigger: GCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTGAAC...CCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CGCCTGCCACTGTGCTCACTGGTGCAGCCAAAGGGACACGCACAAGCCGTCAGGTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: RLPLCSLVQPKGHAQAVRLLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...CCTGACGGCTTGTGCGTGTCCCTTTGGCTGCACCAGTGAGCACAGTGGCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR GCA 90 bp GCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: AVQPAKSLTLTSAPSLMSLLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...GCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTTGGCCCTGCCGTCCCTaGGCTCCTTGCAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLGAGGSLHARFSCSLYLWPCRP*APCSSP
Trigger: TGGAGAGCTGCAAGGAGCGCAGGGACGGCAGGGCCA...AAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp CAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCGTTTCCGCTCAGGGCCCTaGTTCTCTTTCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: QLLRDVVVAPVTGLVQRRFRSGP*FSFFLL
Trigger: AAGCAAGAAGAAAGAGAAGCAGGGCCCTGAGCGGAA...ACGGCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp AGGGACACGCACAAGCCGTCAGGTCAGCGCGGCATCAGGATGCACTGCAGAGTTCACTGTGCTCACTGGTaGAGCCAAAGGGACACGCAC +
Preference number: 4 (lower is better)
Translates to: RDTHKPSGQRGIRMHCRVHCAHW*SQRDTH
Trigger: GTGCGTGTCCCTTTGGCTGCACCAGTGAGCACAGTG...AACTCTGCAGTGCATCCTGATGCCGCGCTGACCTGACGGCTTGTGCGTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
CDS-3UTR GCA 90 bp CACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCGGTCAGAGGTCAAGGTaGTGGCAGGGCAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: HGALMKTSVRPAASPGSTGQRSR*WQGRIL
Trigger: AAGGATCCTGCCCTGCCAGCACCTTGACCTCTGACC...GGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TCACTGCGGCAACAAGACCTGGCCACCACCCTCACCTCGACCACCACGGCCTTCAAAGAAACATCCACGTaGAGAGGGCAGGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: SLRQQDLATTLTSTTTAFKETST*RGQAAS
Trigger: CGAAGCTGCCTGCCCTCTGCACGTGGATGTTTCTTT...GAAGGCCGTGGTGGTCGAGGTGAGGGTGGTGGCCAGGTCTTGTTGCCGCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR GCA 90 bp AAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACTGTGCCTGGCAGCACTaGAGAGAGCACACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KHLTLKEPACAWQHCREHCAWQH*REHTPG
Trigger: GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACA...GTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp TGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGATGTGCCTGGCAGCACTaGAGAGAGCACACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CQAPNAEGTSMCLAALQRCAWQH*REHTPG
Trigger: GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACA...TCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CACGACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCGAGTCTATGGTTCTGTaGACTGGCCACACCTCTTGG +
Preference number: 4 (lower is better)
Translates to: HDLSRPPQRLRPLSAHCSESMVL*TGHTSW
Trigger: CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC...GGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp ATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTTCCAGGCAGCACCCCTaGTTTCCGGCAGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: MVLCTGHTSWCYLIPDEGSRQHP*FPAGRG
Trigger: GCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGA...ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCTCCAGGCAGCACCCCTaGTTTCCGGCAGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCSRQHP*FPAGRG
Trigger: GCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGA...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CTGCCTGCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCGTGACCCCTCAGCCTTaGTGTCCTGCCTGCAACCAG +
Preference number: 4 (lower is better)
Translates to: LPATRGSPRSSDEDISETVTPQP*CPACNQ
Trigger: CTGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCAC...GGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTAGCACCCACAGTACGTaGGTTCACTGCAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: EHDGHQQMWPRVTPQPCCSTHST*VHCKER
Trigger: TCTTTCCTTGCAGTGAACGCACGTACTGTGGGTGCT...ACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642333.1
CDS-3UTR GCA 90 bp AAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACGCACTCTGCTCTCTCTaGCCGCTCGGGTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: KHLTLKEPACAWQHCREHALCSL*PLGSTA
Trigger: TGCAGTGGACCCGAGCGGGCAGAGAGAGCAGAGTGC...GTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCAGGATGCTCTCCAGGCACCTaGCCCGCCTGCGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: RQNSRLLSEAPGTNMTSGCSPGT*PACEHS
Trigger: GCTGTGCTCGCAGGCGGGGCAGGTGCCTGGAGAGCA...TCCTGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp GGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTAAGCTCCCAGGGGCGCCATaGTCTCCAGGCACCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GKVWHSEFQEVPQIPVAKLPGAP*SPGTCP
Trigger: GGGGCAGGTGCCTGGAGAGCATGGCGCCCCTGGGAG...CTTAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp TGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTACTCCCAGGGGCGCCATaGTCTCCAGGCACCTGCCCC +
Preference number: 4 (lower is better)
Translates to: WARSGIQSSKKSHRYQWLLPGAP*SPGTCP
Trigger: GGGGCAGGTGCCTGGAGAGCATGGCGCCCCTGGGAG...TAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp GCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCACGGCACACTGCAGTaGACATGCCCTTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: APNAEGTSMCLAALQRAHHGTLQ*TCPSWP
Trigger: TGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTG...GTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGTGAGTGCCTGGTCCACGGCACACTaGAGTGCACATGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LHQGFPPCVANIPTHVSAWSTAH*SAHALP
Trigger: AGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCA...GGCACTCACGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp GTGAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGGTGGGATCTGTGCCCTaGGTGGGATCCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VRNCIRASRRVLLTSPHTVGSVP*VGSLPC
Trigger: ACAGGGCAGGGATCCCACGCAGGGCACAGATCCCAC...CGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR GCA 90 bp CAGGCAAGATGGGCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGCTTCCCACTCCTTGCTaGACCCACAGCCCTTACAGA +
Preference number: 4 (lower is better)
Translates to: QARWARSPRASWSERARWLPTPC*THSPYR
Trigger: TCTGTAAGGGCTGTGGGTGCAGCAAGGAGTGGGAAG...CCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGCCCATCTTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR CCA 90 bp GCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCTGGTGTTGTGTCCACTaGGCTGTTGGCAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: ATRGSPRSSDEDISETRRWCCVH*AVGRLL
Trigger: GAGGAGTCTGCCAACAGCCCAGTGGACACAACACCA...GCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCTTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: RRAPADVAPCDPSALLSCFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TGGTGCAGCCAAAGGGACACGCACAAGCCGTCAGGTCAGCGCGGCATCAGGATGCTCCATCTCATGCCATaGTGCTTCGAGGAGCGTACC +
Preference number: 4 (lower is better)
Translates to: WCSQRDTHKPSGQRGIRMLHLMP*CFEERT
Trigger: GGTACGCTCCTCGAAGCACCATGGCATGAGATGGAG...CATCCTGATGCCGCGCTGACCTGACGGCTTGTGCGTGTCCCTTTGGCTGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR CCA 90 bp TCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGCTCCATCTCATGCCATaGTGCTTCGAGGAGCGTACC +
Preference number: 4 (lower is better)
Translates to: SLTLTSAPSLMSSLMRRALHLMP*CFEERT
Trigger: GGTACGCTCCTCGAAGCACCATGGCATGAGATGGAG...CGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp GAGACCGTCTGCAGAAGGGGCCCTTTCTCTGACACGCCTGCCACTGTGCTCACTTGCCACTGTGCTCACTaGTGCAGCCAAAGGGACACG +
Preference number: 4 (lower is better)
Translates to: ETVCRRGPFSDTPATVLTCHCAH*CSQRDT
Trigger: CGTGTCCCTTTGGCTGCACCAGTGAGCACAGTGGCA...AGTGAGCACAGTGGCAGGCGTGTCAGAGAAAGGGCCCCTTCTGCAGACGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
CDS-3UTR CCA 90 bp CTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCCAGAGGTCAAGGTGCTaGCAGGGCAGGATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LHGALMKTSVRPAASPGSQRSRC*QGRILP
Trigger: AGGAAGGATCCTGCCCTGCCAGCACCTTGACCTCTG...GCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AGGGACACGCACAAGCCGTCAGGTCAGCGCGGCATCAGGATGCACTGCAGAGTTGAACCAGCATGTGCCTaGCAGCACTGCAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RDTHKPSGQRGIRMHCRVEPACA*QHCREH
Trigger: GTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTC...AACTCTGCAGTGCATCCTGATGCCGCGCTGACCTGACGGCTTGTGCGTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR CCA 90 bp CTTGCTGCAGAGGAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCGAGCCTTTCATAGATaGCACTTGCTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: LAAEEHDGHQQMWPRVTPRAFHR*HLLGNL
Trigger: CAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCG...AGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTCCTCTGCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCTATGGTTCTGTGCACTaGCCACACCTCTTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: PCFPAGRGCQAHHDLSRPYGSVH*PHLLVL
Trigger: TAACACCAAGAGGTGTGGCCAGTGCACAGAACCATA...GGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACATATGGTTCTGTGCACTaGCCACACCTCTTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: PHLQAAPLLSGRTGLSGTYGSVH*PHLLVL
Trigger: TAACACCAAGAGGTGTGGCCAGTGCACAGAACCATA...TGTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CCTCGGGTTCTAACCTCTCCTGCTTCTGGCATCTCTCAGACTCAGCAGGAAAGGGGGCACCAGCAGATGTaGCCCCGTGTGACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PRVLTSPASGISQTQQERGHQQM*PRVTPQ
Trigger: CTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCC...CCTTTCCTGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTTAGAACCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATAGCTTTAAGGGCCCATaGGGCTGCCCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WRLGAGGSLHARFSCSLYSFKGP*GCPGPA
Trigger: TGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCT...ATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp AACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGGGCTCTGCTGACTCATaGGTGTTGTCTGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: NAEGTSMCLAALQRAHPRGSADS*VLSEGG
Trigger: CCCACCCTCAGACAACACCCATGAGTCAGCAGAGCC...CCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp ACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCCTGCAGCTGAGCGGGTaGGAGAAGCCTCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: TLKEPACAWQHCREHTPGLQLSG*EKPLQL
Trigger: AAGTTGAAGAGGCTTCTCCCACCCGCTCAGCTGCAG...GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp TGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTAGGCCTGGCCTTGGGCTaGCCCTGCCCTGCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: WARSGIQSSKKSHRYQWLGLALG*PCPAWD
Trigger: ATCCCACGCAGGGCAGGGCCAGCCCAAGGCCAGGCC...TAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp CACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCGGCTCTGGTCCTGCCTaGGAGGAGATCTACAGGGGA +
Preference number: 4 (lower is better)
Translates to: HLTLKEPACAWQHCREHTGSGPA*EEIYRG
Trigger: TCCCCTGTAGATCTCCTCCCAGGCAGGACCAGAGCC...GGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp CCGGCAGGACCCAAGTCCTCTGTATTCAGAGGCCGACCCTGCTTTCCAGAGACTCAGAGAGTCAGGCTGTaGCAGGGGCCCCTGTGTATC +
Preference number: 4 (lower is better)
Translates to: PAGPKSSVFRGRPCFPETQRVRL*QGPLCI
Trigger: GATACACAGGGGCCCCTGCCACAGCCTGACTCTCTG...AGTCTCTGGAAAGCAGGGTCGGCCTCTGAATACAGAGGACTTGGGTCCTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp GTAGAGGACAGACTTCAAAAGCAGATACAAGAGGCCCCGGGCAGACAGGGCAGGAGTCCCAGGGCAAGCTaGTCTGAGAGGGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: VEDRLQKQIQEAPGRQGRSPRAS*SERARW
Trigger: CCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACT...CCTGCCCTGTCTGCCCGGGGCCTCTTGTATCTGCTTTTGAAGTCTGTCCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR TCA 90 bp CTCAGCAGGAAAGGCTCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCTGCGATTCCATAGCTaGAAGTCAGTGCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: LSRKGSQALRAHGAALGLLRFHS*KSVLTR
Trigger: CCTCGTCAGCACTGACTTTCAGCTATGGAATCGCAG...CAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGAGCCTTTCCTGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642695.1
ENST00000643964.1
CDS-3UTR TCA 90 bp GCAAGATGGGCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCACTGCGATTCCATAGCTaGAAGTCAGTGCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: ARWARSPRASWSERARWALRFHS*KSVLTR
Trigger: CCTCGTCAGCACTGACTTTCAGCTATGGAATCGCAG...TGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGCCCATCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR TCA 90 bp GTAGAGGACAGACTTCAAAAGCAGATACAAGAGGCCCCGGGCAGACAGGGCAGGCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VEDRLQKQIQEAPGRQGRPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...CCTGCCCTGTCTGCCCGGGGCCTCTTGTATCTGCTTTTGAAGTCTGTCCTCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR TCA 90 bp TCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: SPRMAARCRRVSPRSFLLFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...CAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR TCA 90 bp ATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTACTCGTCCGACGTGTCTaGCAGGATACGATGGGACGC +
Preference number: 4 (lower is better)
Translates to: MAARCRRVSPRSFLLFTLLVRRV*QDTMGR
Trigger: GCGTCCCATCGTATCCTGTCAGACACGTCGGACGAG...TAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp AGCAGGACCCCGGCGGTCCTTTGGATCAGAACACACTCAACGATGCAGACACCTCGTGGTCGGCAATGGTaGGAGACCGTCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SRTPAVLWIRTHSTMQTPRGRQW*ETVCRR
Trigger: CCTTCTGCAGACGGTCTCTCACCATTGCCGACCACG...AGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGGACCGCCGGGGTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR TCA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCAATCTCTCCCTTGCTTaGTTTTACAAGGGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSNLSLA*FYKGKG
Trigger: ACCCTTACCCTTGTAAAATCAAGCAAGGGAGAGATT...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000644784.1
CDS-3UTR TCA 90 bp CTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAACTCAGCCGTGTCAGTaGCTTCTACCAGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LTLKEPACAWQHCREHTPTQPCQ*LLPGAA
Trigger: TGCAGCCCCTGGTAGAAGTCACTGACACGGCTGAGT...TGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR TCA 90 bp GTGAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGGTCAACACACTGAGCTaGGGCCACTGGTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: VRNCIRASRRVLLTSPHTVNTLS*GHWSTA
Trigger: TGCCGTGGACCAGTGGCCTCAGCTCAGTGTGTTGAC...CGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp ACCGTCTGCAGAAGGGGCCCTTTCTCTGACACGCCTGCCACTGTGCTCACTGGTCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: TVCRRGPFSDTPATVLTGLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...ACCAGTGAGCACAGTGGCAGGCGTGTCAGAGAAAGGGCCCCTTCTGCAGACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR GCA 90 bp AACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: NAEGTSMCLAALQRAHPRRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...CCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000647238.1
CDS-3UTR GCA 90 bp AGCCTTGCTGTCCTGCCTGCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SLAVLPATRGSPRSSDEDRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...GTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGCAGGCAGGACAGCAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AGTCCTTTTTCAATAGGTGCTTGTCGTCCACCGGAGGAACCCTGTCCTGCTCGTGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SPFSIGACRPPEEPCPARVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...ACGAGCAGGACAGGGTTCCTCCGGTGGACGACAAGCACCTATTGAAAAAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp CAGGAAAAGACTGAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: QEKTEGAKHLTLKEPACAVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...GGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTCAGTCTTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000647238.1
CDS-3UTR GCA 90 bp GCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCATGAGAAGGGCCACCTaGTGGCGCTCGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AGHNGHFLKLESMVLCTGMRRAT*WRSERG
Trigger: CCCCCTCTCCGAGCGCCAGCAGGTGGCCCTTCTCAT...GCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp TGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: WRLGAGGSLHARFSCSLYSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...ATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp TGGGGGCCATTATCCTGCCTACCTCACCGTAATTCCAGGGTCCTTGACATTTTTCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: WGPLSCLPHRNSRVLDIFRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...AAAAATGTCAAGGACCCTGGAATTACGGTGAGGTAGGCAGGATAATGGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCCGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: HNGHFLKLESMVLCTGHTRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...GGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp TCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: SLTLTSAPSLMSSLMRRALLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...CGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GAGACCGTCTGCAGAAGGGGCCCTTTCTCTGACACGCCTGCCACTGTGCTCACTCATCTCATGCCATGGTaGTTCGAGGAGCGTACCAGC +
Preference number: 4 (lower is better)
Translates to: ETVCRRGPFSDTPATVLTHLMPW*FEERTS
Trigger: GCTGGTACGCTCCTCGAAGCACCATGGCATGAGATG...AGTGAGCACAGTGGCAGGCGTGTCAGAGAAAGGGCCCCTTCTGCAGACGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR GCA 90 bp CTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTTTCCGCTCAGGGCCCTaGTTCTCTTTCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LQPAAASRRRSSPGYRPRFRSGP*FSFFLL
Trigger: AAGCAAGAAGAAAGAGAAGCAGGGCCCTGAGCGGAA...ACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGAGCGCGGCATCAGGATaGACTGCAGAGTTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EVLDVDVCPLADELFDAPSAASG*TAELWA
Trigger: AGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCT...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR GCA 90 bp AACTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCGGGCTCCCTCGTGGCTaGCCCAGGACAAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: NFTHLSPLALGKVWHSEFGLPRG*PRTSRT
Trigger: GGTCCTGCTTGTCCTGGGGCAGCCACGAGGGAGCCC...GAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CCACTGGCCAAGCATCCTCCGGCAGGACCCAAGTCCTCTGTATTCAGAGGCCGAGAAGGAACCAGCATGTaGCTGGCAGCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLAKHPPAGPKSSVFRGREGTSM*LAALQR
Trigger: TCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTC...TCGGCCTCTGAATACAGAGGACTTGGGTCCTGCCGGAGGATGCTTGGCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR GCA 90 bp CTGCCTGCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCACAGAACCACCCAGATaGCAGGACAGGCCGGATGTG +
Preference number: 4 (lower is better)
Translates to: LPATRGSPRSSDEDISETTEPPR*QDRPDV
Trigger: CACATCCGGCCTGTCCTGGCATCTGGGTGGTTCTGT...GGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCAAACTCGCTTTCCTGTaGCCCACATCATGGAACCGG +
Preference number: 4 (lower is better)
Translates to: ATRGSPRSSDEDISETRRKLAFL*PTSWNR
Trigger: CCGGTTCCATGATGTGGGGCACAGGAAAGCGAGTTT...GCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GCACAGCTCGGCCTTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCAAAACTCGCTTTCCTGTaGCCCACATCATGGAACCGG +
Preference number: 4 (lower is better)
Translates to: AQLGLEGGQGENSLSCAPKLAFL*PTSWNR
Trigger: CCGGTTCCATGATGTGGGGCACAGGAAAGCGAGTTT...TGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp ATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGCTGAGACCTCTCAGTaGCCACTGCTCCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: MVLCTGHTSWCYLIPDEGAETSQ*PLLLGR
Trigger: CCGGCCCAGGAGCAGTGGGCACTGAGAGGTCTCAGC...ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp TGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGGCTGAGACCTCTCAGTaGCCACTGCTCCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: CSWAGHNGHFLKLESMVLAETSQ*PLLLGR
Trigger: CCGGCCCAGGAGCAGTGGGCACTGAGAGGTCTCAGC...CAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp TCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGTCCAGGCAGCACCCCTaGTTTCCGGCAGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: SMVLCTGHTSWCYLIPDESRQHP*FPAGRG
Trigger: GCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGA...CTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGCCTTGCTGTCCTGCCTaGAACCAGGGGCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: PTGTSRFSSELFKAKALWPCCPA*NQGLST
Trigger: CGTGGAGAGCCCCTGGTTGCAGGCAGGACAGCAAGG...CCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCACATCATGGAACCGACACCTGCCCTCCCCTaGAGCACTGAGCGAATCCCA +
Preference number: 4 (lower is better)
Translates to: LRVGKAKTRFPVPHIMEPTPALP*STERIP
Trigger: TGGGATTCGCTCAGTGCTGCAGGGGAGGGCAGGTGT...CGGTTCCATGATGTGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTCTCCATCATGGGGGCTaGTGGCAGAATTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LQPAAASRRRSSPGYRPRLHHGG*WQNSVS
Trigger: AGAAACTGAATTCTGCCAGCAGCCCCCATGATGGAG...ACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp TCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCCCACAGAGAGTACGTGCGTTCACTaGAAGGAAAGAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SGRTGLSGTPRPLSTPTESTCVH*KERIFQ
Trigger: CTGGAAGATTCTTTCCTTGCAGTGAACGCACGTACT...CTCTGTGGGGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642333.1
CDS-3UTR GCA 90 bp AGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGTCATCAACCGTCCCTTaGCGTGAAATGGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RNQHVPGSTAESTPQAPESSTVP*REMAEP
Trigger: TGGCTCTGCCATTTCACGGCAAGGGACGGTTGATGA...CTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR GCA 90 bp TGTGTTGCTAACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCAACACACGCACTCTGCTCTCTCTaGCCGCTCGGGTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: CVANIPTHVSALGPSSTHALCSL*PLGSTA
Trigger: TGCAGTGGACCCGAGCGGGCAGAGAGAGCAGAGTGC...GTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp GCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCGCTTGGTGAGAAACTaGATCAGGGCTTCCCGCCGT +
Preference number: 4 (lower is better)
Translates to: APNAEGTSMCLAALQRAHRLVRN*IRASRR
Trigger: ACGGCGGGAAGCCCTGATGCAGTTTCTCACCAAGCG...GTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp GAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCCTGTGGCTCTGGTCCTaGCTGGGAGGAGATCTACAG +
Preference number: 4 (lower is better)
Translates to: EGAKHLTLKEPACAWQHCLWLWS*LGGDLQ
Trigger: CTGTAGATCTCCTCCCAGGCAGGACCAGAGCCACAG...GCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR GCA 90 bp CACGACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTTTCATCACGGTGACTaGTGTGCTACATACACCCCG +
Preference number: 4 (lower is better)
Translates to: HDLSRPPQRLRPLSAHCSFHHGD*CATYTP
Trigger: CGGGGTGTATGTAGCACAGCAGTCACCGTGATGAAA...GGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642333.1
CDS-3UTR CCA 90 bp ATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: MAARCRRVSPRSFLLFTLCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...TAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp CGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCTTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: RTCSQQLLRDVVVAPVTGFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...GCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp TGGGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTGCCTACCTCACCGTATGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: WGSQHGHLGGHYPAYLTVCSARC*QRRAKA
Trigger: CGCCTTTGCACGACGCTGCCAACAACGGGCACTACA...TACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGGCAGCTCAGCGGTTCTaGGATTCCGTGGTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: AKHLTLKEPACAWQHCREAAQRF*DSVVGN
Trigger: ATTGCCGACCACGGAATCCCAGAACCGCTGAGCTGC...CTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR CCA 90 bp CCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGTCAGGCTTACAATTGTaGAGGTCAGAGGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: PHLQPAAASRRRSSPGYRSGLQL*RSEVKV
Trigger: CACCTTGACCTCTGACCTCCACAATTGTAAGCCTGA...CCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp CCGGCAGGACCCAAGTCCTCTGTATTCAGAGGCCGACCCTGCTTTCCAGAGACTGAACCAGCATGTGCCTaGCAGCACTGCAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PAGPKSSVFRGRPCFPETEPACA*QHCREH
Trigger: GTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTC...AGTCTCTGGAAAGCAGGGTCGGCCTCTGAATACAGAGGACTTGGGTCCTGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp GACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTGGCGAGCCTTTCATAGATaGCACTTGCTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: DLSRPPQRLRPLSAHCSWRAFHR*HLLGNL
Trigger: CAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCG...CCAGGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGACTGGCCACACCTCTTaGTGTTACCTCATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SAVQPAKSLTLTSAPSLMTGHTS*CYLIPD
Trigger: GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGT...CATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp CTTGCTGCAGAGGAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTTATGGTTCTGTGCACTaGCCACACCTCTTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: LAAEEHDGHQQMWPRVTPYGSVH*PHLLVL
Trigger: TAACACCAAGAGGTGTGGCCAGTGCACAGAACCATA...AGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTCCTCTGCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCAGTGCCCACTGCTCCTaGGCCGGCCACAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCSAHCS*AGHNGH
Trigger: GTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGAGTGCCCACTGCTCCTaGGCCGGCCACAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRSAHCS*AGHNGH
Trigger: GTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGGGCACCAGCAGATGTaGCCCCGTGTGACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRGHQQM*PRVTPQ
Trigger: CTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCC...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCAACCTCTCCTGCTTCTaGCATCTCTCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: AVQPAKSLTLTSAPSLMSNLSCF*HLSDSA
Trigger: TGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTT...GCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp GACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTGGCATCATGGGGGCTGCTaGCAGAATTCAGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: DLSRPPQRLRPLSAHCSWHHGGC*QNSVSC
Trigger: GCAAGAAACTGAATTCTGCCAGCAGCCCCCATGATG...CCAGGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp ACCTGTGTGGGGTGCGTGGGGTCTGCTACACGCTTGGTGAGAAACTGCATCAGGTCTTCCCTCCAGGAATaGGGAAGCAGGAGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: TCVGCVGSATRLVRNCIRSSLQE*GSRSRQ
Trigger: CTGACGGCTCCTGCTTCCCCATTCCTGGAGGGAAGA...CCTGATGCAGTTTCTCACCAAGCGTGTAGCAGACCCCACGCACCCCACACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp TCACTGCGGCAACAAGACCTGGCCACCACCCTCACCTCGACCACCACGGCCTTCTCCCACAGATACCAGTaGCTAAGTCTGTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLRQQDLATTLTSTTTAFSHRYQ*LSLSSL
Trigger: GAGGGAAGACAGACTTAGCCACTGGTATCTGTGGGA...GAAGGCCGTGGTGGTCGAGGTGAGGGTGGTGGCCAGGTCTTGTTGCCGCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp CCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGACCAGGCACTGGGCAAGGTCTaGCATTCAGAGTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PACAWQHCREHTPGTRDQALGKV*HSEFQE
Trigger: TTCTTGGAACTCTGAATGCCAGACCTTGCCCAGTGC...CTGGTCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp CTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCACAGAGACTCACGAGGTaGCAGAGAGTCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LTLKEPACAWQHCREHTPQRLTR*QRVRLW
Trigger: CCACAGCCTGACTCTCTGCCACCTCGTGAGTCTCTG...TGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR TCA 90 bp GTCTGCAGAAGGGGCCCTTTCTCTGACACGCCTGCCACTGTGCTCACTGGTGCACTGCGATTCCATAGCTaGAAGTCAGTGCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: VCRRGPFSDTPATVLTGALRFHS*KSVLTR
Trigger: CCTCGTCAGCACTGACTTTCAGCTATGGAATCGCAG...TGCACCAGTGAGCACAGTGGCAGGCGTGTCAGAGAAAGGGCCCCTTCTGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR TCA 90 bp CTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCACATTGGCGCCCGCGGTaGAGGGCAGCTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: LESMVLCTGHTSWCYLIPHWRPR*RAASAC
Trigger: GCAAGCGGAAGCTGCCCTTCACCGCGGGCGCCAATG...TGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp CGTGGCCTTCTGTGGCTCTGGGTTCTTGGCCTTGTGCTTGAGGCCTTTTTCGAAACTCATACTCGTCCTTaGCGGGGGCCGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RGLLWLWVLGLVLEAFFETHTRP*RGPWPS
Trigger: AGAAGGCCACGGCCCCCGTCAAGGACGAGTATGAGT...TTCGAAAAAGGCCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp CGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTCGTGGTCGGCAATGGTaGGAGACCGTCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RLGAGGSLHARFSCSLYLRGRQW*ETVCRR
Trigger: CCTTCTGCAGACGGTCTCTCACCATTGCCGACCACG...AAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR TCA 90 bp GCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTTTTCCAGTTCGTGTGTaGCATGTTCTATTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: APSLMSSLMRRASPRMAAFPVRV*HVLLLN
Trigger: ATTCAACAATAGAACATGTCACACACGAACTGGAAA...AGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR TCA 90 bp ACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACGTCAGGAAAAGACTaGAGGTGCCAAGCACCTAAC +
Preference number: 4 (lower is better)
Translates to: TLKEPACAWQHCREHTPGTSGKD*RCQAPN
Trigger: GTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACGT...GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp AGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGACGTCAGGAAAAGACTaGAGGTGCCAAGCACCTAAC +
Preference number: 4 (lower is better)
Translates to: RNQHVPGSTAESTPQAPETSGKD*RCQAPN
Trigger: GTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACGT...CTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp ATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTAGAGGCCGTCCAGGCTaGCCCAGAAGGGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: MVLCTGHTSWCYLIPDEGRGRPG*PRRGKL
Trigger: CAGCTTTCCCCTTCTGGGTCAGCCTGGACGGCCTCT...ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCGTCCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: QLLRDVVVAPVTGLVQRRPLSKA*VYGSVH
Trigger: GTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGG...ACGGCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR TCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCGACCCCCACAGAGGCTaGGACCTCTCAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCDPHRG*DLSVPT
Trigger: AGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTC...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp TCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGAAGGGACTCAGTGTTCTaGGTTCCCTGCTCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SQALRAHGAALGLQDDLGRDSVF*VPCSSQ
Trigger: CTGAGACGAGCAGGGAACTCAGAACACTGAGTCCCT...TCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CTTCCCAAAGTCGCCGTCGGACTTGTCCTTGAAGCCACTCTCGCAGCCACACTCCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: LPKVAVGLVLEATLAATLLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...GAGTGTGGCTGCGAGAGTGGCTTCAAGGACAAGTCCGACGGCGACTTTGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp CCGGCAGGACCCAAGTCCTCTGTATTCAGAGGCCGACCCTGCTTTCCAGAGACTCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PAGPKSSVFRGRPCFPETLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...AGTCTCTGGAAAGCAGGGTCGGCCTCTGAATACAGAGGACTTGGGTCCTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR GCA 90 bp GCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAATCTCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: ALRAHGAALGLQDDLGQSLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...AGATTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: EGAKHLTLKEPACAWQHCRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...GCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000647238.1
CDS-3UTR GCA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCACGGATGGCGGCTCGGTaGAGGCGGGTCTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSRMAAR*RRVSPR
Trigger: GCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCG...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: WRLGAGGSLHARFSCSLYLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...ATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: VLCTGHTSWCYLIPDEGGLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...CCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTTCACCTCCGCACCTaGAGCCAGCAGCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRVHLRT*SQQLLR
Trigger: GCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTGAAC...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCGTTCACCTCCGCACCTaGAGCCAGCAGCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCVHLRT*SQQLLR
Trigger: GCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTGAAC...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: LHGALMKTSVRPAASPGSLLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...GCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CACCTCCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTAAGTGTAAGTGCCTTTaGCTAACAGGAGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: HLRTCSQQLLRDVVVAPVKCKCL*LTGGSP
Trigger: TGGTGAACCTCCTGTTAGGCAAAGGCACTTACACTT...AACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp TCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGCCTTATCATTCCCGTTaGTCATCTTCACTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: SLTLTSAPSLMSSLMRRAPYHSR*SSSLGR
Trigger: GCGACCCAGTGAAGATGAGCAACGGGAATGATAAGG...CGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp GCACAGCTCGGCCTTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCATTCCGCTCAGGGCCCTaGTTCTCTTTCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: AQLGLEGGQGENSLSCAPFRSGP*FSFFLL
Trigger: AAGCAAGAAGAAAGAGAAGCAGGGCCCTGAGCGGAA...TGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp AAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAAAAGAAACATCCACGTaGAGAGGGCAGGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: KEPACAWQHCREHTPGTRKETST*RGQAAS
Trigger: CGAAGCTGCCTGCCCTCTGCACGTGGATGTTTCTTT...TCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCAGGATGTGCCTGGCAGCACTaGAGAGAGCACACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RQNSRLLSEAPGTNMTSGCAWQH*REHTPG
Trigger: GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACA...TCCTGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGAAGGAACCAGCATGTaGCTGGCAGCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LTLKEPACAWQHCREHTPEGTSM*LAALQR
Trigger: TCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTC...TGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp GCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCCTCTCAGTGCCCACTaGTCCTGGGCCGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: AGHNGHFLKLESMVLCTGPLSAH*SWAGHN
Trigger: ATTGTGGCCGGCCCAGGAGCAGTGGGCACTGAGAGG...GCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCATCCAGGCAGCACCCCTaGTTTCCGGCAGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: LESMVLCTGHTSWCYLIPSRQHP*FPAGRG
Trigger: GCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGA...TGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CTCAGCAGGAAAGGCTCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGGCGAATCCCAGACACTaGAGAGCCTTTTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LSRKGSQALRAHGAALGLANPRH*RAFSSS
Trigger: TGAACTGGAAAAGGCTCTGCAGTGTCTGGGATTCGC...CAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGAGCCTTTCCTGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCGTCCCCAGTCCCAGCTaGTTAGGGGCCACCACACTC +
Preference number: 4 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCVPSPS*LGATTL
Trigger: GAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGAC...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AGCCGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCAGCACTCTGCTCTCTCTaGCCGCTCGGGTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: SRQNSRLLSEAPGTNMTSALCSL*PLGSTA
Trigger: TGCAGTGGACCCGAGCGGGCAGAGAGAGCAGAGTGC...TGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp AGGAGCCGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGCACGGCACACTGCAGTaGACATGCCCTTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSRQNSRLLSEAPGTNMTHGTLQ*TCPSWP
Trigger: TGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTG...CGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACGGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp TGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGATGGTCCACGGCACACTaGAGTGCACATGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CQAPNAEGTSMCLAALQRWSTAH*SAHALP
Trigger: AGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCA...TCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CCGTGTGTTGCTAACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCAACATGGTCCACGGCACACTaGAGTGCACATGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PCVANIPTHVSALGPSSTWSTAH*SAHALP
Trigger: AGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCA...TGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp TGTGTTGCTAACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCAACACACCCCCACACACGTGAGTaGCTTGGGACCCTCGTCAAC +
Preference number: 4 (lower is better)
Translates to: CVANIPTHVSALGPSSTHPHTRE*LGTLVN
Trigger: GTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGG...GTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCGTCACCAGTGCAGCCTaGGTCAGGGCGCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: HNGHFLKLESMVLCTGHTVTSAA*VRARLP
Trigger: AGGGAGGCGCGCCCTGACGCAGGCTGCACTGGTGAC...GGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646838.1
CDS-3UTR CCA 90 bp CGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTTGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: RLGAGGSLHARFSCSLYLCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...AAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp CTGCCTGCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCTGGTGTTGTGTCCACTaGGCTGTTGGCAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: LPATRGSPRSSDEDISETWCCVH*AVGRLL
Trigger: GAGGAGTCTGCCAACAGCCCAGTGGACACAACACCA...GGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCATTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: QPAAASRRRSSPGYRPRAFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...TGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGCCTTGTACTTTTCTGTaGACTCTTTATCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PLADELFDAPGVPADGGSPCTFL*TLYPSS
Trigger: AGAAGAAGGATAAAGAGTCCACAGAAAAGTACAAGG...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CGTGGCCTTCTGTGGCTCTGGGTTCTTGGCCTTGTGCTTGAGGCCTTTTTCGAACGGCCTTCTCTTTCTTaGCTCGCTCTCGGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: RGLLWLWVLGLVLEAFFERPSLS*LALGRG
Trigger: GCCACGACCGAGAGCGAGCCAAGAAAGAGAAGGCCG...TTCGAAAAAGGCCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGTTCTGGGATTCCGTaGTCGGCAATGGTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: EVLDVDVCPLADELFDAPGSGIP*SAMVRD
Trigger: GTCTCTCACCATTGCCGACCACGGAATCCCAGAACC...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR CCA 90 bp TTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCTTTATCTTTATCCTTTaGATCAGAACACACTCAACG +
Preference number: 4 (lower is better)
Translates to: FDAPGVPADGGSVQAGLSFIFIL*IRTHST
Trigger: CGTTGAGTGTGTTCTGATCCAAAGGATAAAGATAAA...GGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR CCA 90 bp ACTGAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACGAACCAGCATGTGCCTaGCAGCACTGCAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TEGAKHLTLKEPACAWQHEPACA*QHCREH
Trigger: GTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTC...GTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTCAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp GAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGTGGAACCAGCATGTGCCTaGCAGCACTGCAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: EKLHQGFPPCVANIPTHVEPACA*QHCREH
Trigger: GTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTC...CACGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp GCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCCATCATGGGGGCTGCTaGCAGAATTCAGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ATRGSPRSSDEDISETRRHHGGC*QNSVSC
Trigger: GCAAGAAACTGAATTCTGCCAGCAGCCCCCATGATG...GCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCTCCTTTCCTCCATCATaGGGGCTGCTGGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: LHGALMKTSVRPAASPGSSFPPS*GLLAEF
Trigger: GAATTCTGCCAGCAGCCCCCATGATGGAGGAAAGGA...GCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GTGAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGGTCCCCAGGCCTCCCTaGCAGGGCTGTCACATAAAA +
Preference number: 4 (lower is better)
Translates to: VRNCIRASRRVLLTSPHTVPRPP*QGCHIK
Trigger: TTTTATGTGACAGCCCTGCCAGGGAGGCCTGGGGAC...CGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp TTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACCTGTGTGGGGTGCGTaGGGTCTGCTACACGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSPLALGKVWHSEFQEVPPVWGA*GLLHAW
Trigger: CCAAGCGTGTAGCAGACCCCACGCACCCCACACAGG...TGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp AGCCGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCACCTGTGTGGGGTGCGTaGGGTCTGCTACACGCTTGG +
Preference number: 4 (lower is better)
Translates to: SRQNSRLLSEAPGTNMTSPVWGA*GLLHAW
Trigger: CCAAGCGTGTAGCAGACCCCACGCACCCCACACAGG...TGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp TTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCAACGTGCCAGCACCCACTaGCCAAGCATCCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: FTHLSPLALGKVWHSEFQRASTH*PSILRQ
Trigger: CTGCCGGAGGATGCTTGGCCAGTGGGTGCTGGCACG...TTGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp GATTCCGTGGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTTCTCTGACCCCGGCGGTCCTTTaGATCAGAACACACTCAACG +
Preference number: 4 (lower is better)
Translates to: DSVVGNGERPSAEGALSLTPAVL*IRTHST
Trigger: CGTTGAGTGTGTTCTGATCCAAAGGACCGCCGGGGT...CAGAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568924.1
3UTR CAA 72 bp CCTTTGCCTAACAGGAGGTTCACCATCGTGGGGGAGTaGGCCACTTTCAGCGGCGTCTCGCCTTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PLPNRRFTIVGE*ATFSGVSPFLL
Trigger: CAACAGGAAAGGCGAGACGCCGCTGAAAGTGGCCAACTCCCCCACGATGGTGAACCTCCTGTTAGGCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp CAGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGCTGAAAGTCAGTGCTaGCGAGGACTGTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: QRRPACEVLDVDVCPLADAESQC*RGLSFK
Trigger: TTTAAAAGACAGTCCTCGTCAGCACTGACTTTCAGC...ATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000643964.1
ENST00000645278.1
CDS-3UTR TCA 90 bp ACTGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TGQGLAFRVPRSPTDTSGPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...GCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp ATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: MVLCTGHTSWCYLIPDEGPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp GACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTGGTTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: DLSRPPQRLRPLSAHCSWFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...CCAGGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGCGTCGATTCCATAGCTaGAAGTCAGTGCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: EVLDVDVCPLADELFDAPRRFHS*KSVLTR
Trigger: CCTCGTCAGCACTGACTTTCAGCTATGGAATCGACG...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp TGGGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTGCCTACCTCACCGTACGTCGATTCCATAGCTaGAAGTCAGTGCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: WGSQHGHLGGHYPAYLTVRRFHS*KSVLTR
Trigger: CCTCGTCAGCACTGACTTTCAGCTATGGAATCGACG...TACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644784.1
CDS-3UTR TCA 90 bp ATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGAGACAACCATGGTaGCACAGCTCTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: MKTSVRPAASPGSTPAFRQRQPW*HSSFQL
Trigger: CAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTG...CCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp AACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGACGTCAGGAAAAGACTaGAGGTGCCAAGCACCTAAC +
Preference number: 4 (lower is better)
Translates to: NAEGTSMCLAALQRAHPRTSGKD*RCQAPN
Trigger: GTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACGT...CCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp GGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACGACCCCCACAGAGGCTaGGACCTCTCAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: GHNGHFLKLESMVLCTGHDPHRG*DLSVPT
Trigger: AGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTC...GTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp ACTGGTCCACGGCACACTGCAGTGCACATGCCCTTCCTGGCCAGAGGCTCCCAGCACCAGGAACAAACATaGCGTCAGGAAAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: TGPRHTAVHMPFLARGSQHQEQT*RQEKTE
Trigger: TTCAGTCTTTTCCTGACGTCATGTTTGTTCCTGGTG...CTGGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp GGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGACAGCCGTCTCCTATCTaGGGCACCAGGAACAAACAT +
Preference number: 4 (lower is better)
Translates to: GAKHLTLKEPACAWQHCRQPSPI*GTRNKH
Trigger: ATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTG...TCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp CATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTAAGTCTGTCTTCCCTCGGGTCCACTGCAGCTaGGCGGGTGGGAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: HSEFQEVPQIPVAKSVFPRVHCS*AGGRSL
Trigger: GAGGCTTCTCCCACCCGCTCAGCTGCAGTGGACCCG...AGGGAAGACAGACTTAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp AGCCGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCAGTCAACACACTGAGCTaGGGCCACTGGTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: SRQNSRLLSEAPGTNMTSVNTLS*GHWSTA
Trigger: TGCCGTGGACCAGTGGCCTCAGCTCAGTGTGTTGAC...TGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp CTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCAACATCCCCACACACGTaGGTGCCTTGGGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: LHTLVASSTGQGLAFRVPTSPHT*VPWDPR
Trigger: ACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGT...TGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp CTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCACTGCTACACGCTTGGTaGGAAACTGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LTLKEPACAWQHCREHTPLLHAW*ETASGL
Trigger: AAGCCCTGATGCAGTTTCTCACCAAGCGTGTAGCAG...TGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp TGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: WRLGAGGSLHARFSCSLYPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...ATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp CCCACCCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: PTPPEQAVSQVSSLRPRHPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...GTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AGTGCCCACTGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: SAHCSWAGHNGHFLKLESLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...AGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CCCACCCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACCTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PTPPEQAVSQVSSLRPRHLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...GTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CCGTGTGTTGCTAACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCAACACTCTTCCTGCTGTGGTaGTTTAGGGCACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PCVANIPTHVSALGPSSTLFLLW*FRAPTL
Trigger: AAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAG...TGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567736.6
ENST00000647238.1
CDS-3UTR GCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGTTCCGCTCAGGGCCCTaGTTCTCTGTGTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRFRSGP*FSVSES
Trigger: GGACTCGGACACAGAGAAGCAGGGCCCTGAGCGGAA...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642333.1
ENST00000642695.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp ATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: MVLCTGHTSWCYLIPDEGSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: PTGTSRFSSELFKAKALWLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...CCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGTCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: FCALATPLGVTSFQTRVGLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...ACCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp ACCAGCAACCTGGATTTCCTATGCCCAGAACAGCAATGCACTGAACTCAAGTACCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: TSNLDFLCPEQQCTELKYRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...GTACTTGAGTTCAGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTTGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGGTTCACCTCCGCACCTaGAGCCAGCAGCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: GHFLKLESMVLCTGHTSWVHLRT*SQQLLR
Trigger: GCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTGAAC...CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp AACAGGAGGTTCACCATCGTGGGGGAGTTGGCCACTTTCAGCGGCGTCTCGCCTGGGTTCTTGGCCTTGTaGTTGAGGCCTTTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: NRRFTIVGELATFSGVSPGFLAL*LRPFSN
Trigger: GTTCGAAAAAGGCCTCAAGCACAAGGCCAAGAACCC...AGGCGAGACGCCGCTGAAAGTGGCCAACTCCCCCACGATGGTGAACCTCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp TCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCTTTTTCAATAGGTaGTTGTCGTCCACCGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLTLTSAPSLMSSLMRRASFFNR*LSSTGG
Trigger: TCCTCCGGTGGACGACAAGCACCTATTGAAAAAGGA...CGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp GAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCGGCATCAGGATGCACTaGAGAGTTGTGGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: EGAKHLTLKEPACAWQHCGIRMH*RVVGSI
Trigger: AATGGAGCCCACAACTCTGCAGTGCATCCTGATGCC...GCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR GCA 90 bp CGTCAGGAAAAGACTGAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTTGTGCCTGGCAGCACTaGAGAGAGCACACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RQEKTEGAKHLTLKEPACCAWQH*REHTPG
Trigger: GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACA...ACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp GAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGTGGAAGGAACCAGCATGTaGCTGGCAGCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: EKLHQGFPPCVANIPTHVEGTSM*LAALQR
Trigger: TCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTC...CACGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CTGCTCAAATCCAACCAGACCTACACGGCTAGCGGATACGAGCCTTTCATAGATGCTGAGACCTCTCAGTaGCCACTGCTCCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLKSNQTYTASGYEPFIDAETSQ*PLLLGR
Trigger: CCGGCCCAGGAGCAGTGGGCACTGAGAGGTCTCAGC...ATCTATGAAAGGCTCGTATCCGCTAGCCGTGTAGGTCTGGTTGGATTTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGACCTTGCTGTCCTGCCTaGAACCAGGGGCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: VYGSVHWPHLLVLPHSRRPCCPA*NQGLST
Trigger: CGTGGAGAGCCCCTGGTTGCAGGCAGGACAGCAAGG...TCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACCCTTGCTGTCCTGCCTaGAACCAGGGGCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: GHNGHFLKLESMVLCTGHPCCPA*NQGLST
Trigger: CGTGGAGAGCCCCTGGTTGCAGGCAGGACAGCAAGG...GTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGACCCCTCAGCCTTaGTGTCCTGCCTGCAACCAG +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRVTPQP*CPACNQ
Trigger: CTGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCAC...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCCCAGGCTGGGCTTGCTaGAGAGGAGCACGACGGGCA +
Preference number: 4 (lower is better)
Translates to: HNGHFLKLESMVLCTGHTPGWAC*RGARRA
Trigger: TGCCCGTCGTGCTCCTCTGCAGCAAGCCCAGCCTGG...GGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp ACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGGCTACACCTGCCCTCCCCTaGAGCACTGAGCGAATCCCA +
Preference number: 4 (lower is better)
Translates to: TGTSRFSSELFKAKALWATPALP*STERIP
Trigger: TGGGATTCGCTCAGTGCTGCAGGGGAGGGCAGGTGT...AGCCCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTAGCACAGCCTGGCCCCTaGTGCACTCTGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: WARSGIQSSKKSHRYQWLAQPGP*CTLLSL
Trigger: CAGAGAGAGCAGAGTGCAGCAGGGGCCAGGCTGTGC...TAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCACCCCACACACGTGAGTaGCTTGGGACCCTCGTCAAC +
Preference number: 4 (lower is better)
Translates to: LHTLVASSTGQGLAFRVPPHTRE*LGTLVN
Trigger: GTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGG...TGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCAGAGACCAGGTGCTTTTTCTTGAGTaGCTGAATGTGGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PACAWQHCREHTPGTRDQVLFLE*LNVVAL
Trigger: AAGAGCCACCACATTCAGGCACTCAAGAAAAAGCAC...CTGGTCTCTGGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp ATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTAAAGCTCTTCCTGCTGTaGTGCTTTAGGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: MAARCRRVSPRSFLLFTLKLFLL*CFRAPT
Trigger: GGTGGGTGCCCTAAAGCACCACAGCAGGAAGAGCTT...TAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CCA 90 bp TGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAAAGCTCTTCCTGCTGTaGTGCTTTAGGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: CQAPNAEGTSMCLAALQRKLFLL*CFRAPT
Trigger: GGTGGGTGCCCTAAAGCACCACAGCAGGAAGAGCTT...TCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000647238.1
CDS-3UTR CCA 90 bp ATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTTGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: MVLCTGHTSWCYLIPDEGCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp CCCACCCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGGTGTTGTGTCCACTaGGCTGTTGGCAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: PTPPEQAVSQVSSLRPRHWCCVH*AVGRLL
Trigger: GAGGAGTCTGCCAACAGCCCAGTGGACACAACACCA...GTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTTGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: RLGAGGSLHARFSCSLYLCSARC*QRRAKA
Trigger: CGCCTTTGCACGACGCTGCCAACAACGGGCACTACA...AAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp TGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATGGAGGTTCACCATCGTaGGGGAGTTGGCCACTTTCA +
Preference number: 4 (lower is better)
Translates to: WRLGAGGSLHARFSCSLYGGSPS*GSWPLS
Trigger: TGAAAGTGGCCAACTCCCCCACGATGGTGAACCTCC...ATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp TGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATGGCCTTCTGTGGCTCTaGGTTCTTGGCCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WRLGAGGSLHARFSCSLYGLLWL*VLGLVL
Trigger: AAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCC...ATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp CTTCCCAAAGTCGCCGTCGGACTTGTCCTTGAAGCCACTCTCGCAGCCACACTCTGGGGAGTAGTACCCTaGCGACAAGCAGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: LPKVAVGLVLEATLAATLWGVVP*RQAGKL
Trigger: AAGTTTGCCTGCTTGTCGCCAGGGTACTACTCCCCA...GAGTGTGGCTGCGAGAGTGGCTTCAAGGACAAGTCCGACGGCGACTTTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp GCACAGCTCGGCCTTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCATCATCACCAGCAACCTaGATTTCCTATGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: AQLGLEGGQGENSLSCAPSSPAT*ISYAQN
Trigger: GTTCTGGGCATAGGAAATCCAGGTTGCTGGTGATGA...TGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AGAGGGCACAGCTCGGCCTTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCGAGCCTTTCATAGATaGCACTTGCTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: RGHSSALRVGKAKTRFPVRAFHR*HLLGNL
Trigger: CAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCG...CACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CTGCTCAAATCCAACCAGACCTACACGGCTAGCGGATACGAGCCTTTCATAGATAGTGCCCACTGCTCCTaGGCCGGCCACAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLKSNQTYTASGYEPFIDSAHCS*AGHNGH
Trigger: GTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT...ATCTATGAAAGGCTCGTATCCGCTAGCCGTGTAGGTCTGGTTGGATTTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TGGGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTGCCTACCTCACCGTAACAACACGGGCATCTTaGGGGCCATTATCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: WGSQHGHLGGHYPAYLTVTTRAS*GPLSCL
Trigger: TAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGT...TACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GTCAAGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTGCTGAACCTCTCCTGCTTCTaGCATCTCTCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: VKVLAGQDPSFPPSWGLLNLSCF*HLSDSA
Trigger: TGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTT...CAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CTGCCTGCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCTCCTTTCCTCCATCATaGGGGCTGCTGGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: LPATRGSPRSSDEDISETSFPPS*GLLAEF
Trigger: GAATTCTGCCAGCAGCCCCCATGATGGAGGAAAGGA...GGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AGCCGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCATGCGGCAACAAGACCTaGCCACCACCCTCACCTCGA +
Preference number: 4 (lower is better)
Translates to: SRQNSRLLSEAPGTNMTSCGNKT*PPPSPR
Trigger: TCGAGGTGAGGGTGGTGGCCAGGTCTTGTTGCCGCA...TGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR TCA 90 bp CAGGCAAGATGGGCTAGAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCTGAAAGTCAGTGCTaGCGAGGACTGTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: QARWARSPRASWSERARWAESQC*RGLSFK
Trigger: TTTAAAAGACAGTCCTCGTCAGCACTGACTTTCAGC...CCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTCTAGCCCATCTTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR TCA 90 bp TGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGACTGCGATTCCATAGCTaGAAGTCAGTGCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: CQAPNAEGTSMCLAALQRLRFHS*KSVLTR
Trigger: CCTCGTCAGCACTGACTTTCAGCTATGGAATCGCAG...TCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647238.1
CDS-3UTR TCA 90 bp GGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GHNGHFLKLESMVLCTGHPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...GTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp GCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCGTGAGTTTTCTATGGTaGCTACACAAAACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ATRGSPRSSDEDISETRRVSFLW*LHKTSG
Trigger: GCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCAC...GCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCAGAGGCCGTCCAGGCTaGCCCAGAAGGGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCRGRPG*PRRGKL
Trigger: CAGCTTTCCCCTTCTGGGTCAGCCTGGACGGCCTCT...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACTTGCTGGGAAACCTGTaGGAGGCCGTCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDLLGNL*EAVQAD
Trigger: GTCAGCCTGGACGGCCTCTCACAGGTTTCCCAGCAA...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp TCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGTTGCTGGGAAACCTGTaGGAGGCCGTCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SMVLCTGHTSWCYLIPDELLGNL*EAVQAD
Trigger: GTCAGCCTGGACGGCCTCTCACAGGTTTCCCAGCAA...CTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp AGCGGATACGAGCCTTTCATAGATGGCACTTGCTGGGAAACCTGTGAGAGGCCGAGGGACTCAGTGTTCTaGGTTCCCTGCTCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SGYEPFIDGTCWETCERPRDSVF*VPCSSQ
Trigger: CTGAGACGAGCAGGGAACTCAGAACACTGAGTCCCT...CGGCCTCTCACAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCGTATCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GTGAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGCAGCCGTCTCCTATCTaGGGCACCAGGAACAAACAT +
Preference number: 4 (lower is better)
Translates to: VRNCIRASRRVLLTSPHTQPSPI*GTRNKH
Trigger: ATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTG...CGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp TTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCAAACATCCCCACACACGTaGGTGCCTTGGGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: FTHLSPLALGKVWHSEFQTSPHT*VPWDPR
Trigger: ACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGT...TTGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp CCACTGGCCAAGCATCCTCCGGCAGGACCCAAGTCCTCTGTATTCAGAGGCCGATTTTTCTTGAGTGCCTaGATGTGGTGGCTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PLAKHPPAGPKSSVFRGRFFLSA*MWWLLG
Trigger: CCCTAAGAGCCACCACATTCAGGCACTCAAGAAAAA...TCGGCCTCTGAATACAGAGGACTTGGGTCCTGCCGGAGGATGCTTGGCCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR GCA 90 bp CGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGTCATCATCAACCGTCTaGGATTCCATAGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: RRPACEVLDVDVCPLADESSSTV*DSIAES
Trigger: ACTTTCAGCTATGGAATCGCAGACGGTTGATGATGA...CTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp GAAGTCCCAGGGCAAGCTGGTCTGAGAGGGCTCGGTGGGCAGAGCTGTCTTGGGTCATCATCAACCGTCTaGGATTCCATAGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: EVPGQAGLRGLGGQSCLGSSSTV*DSIAES
Trigger: ACTTTCAGCTATGGAATCGCAGACGGTTGATGATGA...CCCAAGACAGCTCTGCCCACCGAGCCCTCTCAGACCAGCTTGCCCTGGGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR GCA 90 bp TGTGTTGCTAACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCAACACACAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: CVANIPTHVSALGPSSTHRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...GTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567736.6
ENST00000647238.1
CDS-3UTR GCA 90 bp AGCGGATACGAGCCTTTCATAGATGGCACTTGCTGGGAAACCTGTGAGAGGCCGAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SGYEPFIDGTCWETCERPRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...CGGCCTCTCACAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCGTATCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTATGAGAAGGGCCACCTaGTGGCGCTCGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSMRRAT*WRSERG
Trigger: CCCCCTCTCCGAGCGCCAGCAGGTGGCCCTTCTCAT...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp TCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SMVLCTGHTSWCYLIPDESSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...CTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: VLCTGHTSWCYLIPDEGGLLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...CCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGCGCTGGAAGTGTAAGTaGCTTTGCCTAACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: EVLDVDVCPLADELFDAPRWKCK*LCLTGG
Trigger: ACCTCCTGTTAGGCAAAGGCACTTACACTTCCAGCG...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp GGCGGTCCTTTGGATCAGAACACACTCAACGATGCAGACACCTGCTGGTTCTTCCACTGTGCTCACTGGTaGAGCCAAAGGGACACGCAC +
Preference number: 4 (lower is better)
Translates to: GGPLDQNTLNDADTCWFFHCAHW*SQRDTH
Trigger: GTGCGTGTCCCTTTGGCTGCACCAGTGAGCACAGTG...GAAGAACCAGCAGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGGACCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR GCA 90 bp ATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGTCAGAGGTCAAGGTaGTGGCAGGGCAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: MVLCTGHTSWCYLIPDEGGQRSR*WQGRIL
Trigger: AAGGATCCTGCCCTGCCAGCACCTTGACCTCTGACC...ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGTGCCCAGAACAGCAATaGACTGAACTCAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: RRPACEVLDVDVCPLADECPEQQ*TELKYK
Trigger: TTTGTACTTGAGTTCAGTGCATTGCTGTTCTGGGCA...CTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp GACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTGGTGCCCAGAACAGCAATaGACTGAACTCAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: DLSRPPQRLRPLSAHCSWCPEQQ*TELKYK
Trigger: TTTGTACTTGAGTTCAGTGCATTGCTGTTCTGGGCA...CCAGGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CTCAGCAGGAAAGGCTCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGAACCTGGATTTCCTATaGCCAGAACAGCAATGCACT +
Preference number: 4 (lower is better)
Translates to: LSRKGSQALRAHGAALGLNLDFL*PEQQCT
Trigger: AGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTT...CAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGAGCCTTTCCTGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACAAAGAAACATCCACGTaGAGAGGGCAGGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: KHLTLKEPACAWQHCREHKETST*RGQAAS
Trigger: CGAAGCTGCCTGCCCTCTGCACGTGGATGTTTCTTT...GTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp TGTGTTGCTAACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCAACACACGAAGGAACCAGCATGTaGCTGGCAGCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CVANIPTHVSALGPSSTHEGTSM*LAALQR
Trigger: TCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTC...GTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACAGAACCACCCAGATaGCAGGACAGGCCGGATGTG +
Preference number: 4 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCTEPPR*QDRPDV
Trigger: CACATCCGGCCTGTCCTGGCATCTGGGTGGTTCTGT...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCCCTCTCAGTGCCCACTaGTCCTGGGCCGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCPLSAH*SWAGHN
Trigger: ATTGTGGCCGGCCCAGGAGCAGTGGGCACTGAGAGG...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GGTAAGGGTGGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCCCTCTCAGTGCCCACTaGTCCTGGGCCGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: GKGGHMTDRDNHGDTALFPLSAH*SWAGHN
Trigger: ATTGTGGCCGGCCCAGGAGCAGTGGGCACTGAGAGG...GAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACCACCCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
CDS-3UTR GCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTGCTGAGACCTCTCAGTaGCCACTGCTCCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSAETSQ*PLLLGR
Trigger: CCGGCCCAGGAGCAGTGGGCACTGAGAGGTCTCAGC...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCACCAGGCTGGGCTTGCTaGAGAGGAGCACGACGGGCA +
Preference number: 4 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSPGWAC*RGARRA
Trigger: TGCCCGTCGTGCTCCTCTGCAGCAAGCCCAGCCTGG...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TGGGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTGCCTACCTCACCGTAGCGAATCCCAGACACTaGAGAGCCTTTTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: WGSQHGHLGGHYPAYLTVANPRH*RAFSSS
Trigger: TGAACTGGAAAAGGCTCTGCAGTGTCTGGGATTCGC...TACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TGGGGGCCATTATCCTGCCTACCTCACCGTAATTCCAGGGTCCTTGACATTTTTGTCCCCAGTCCCAGCTaGTTAGGGGCCACCACACTC +
Preference number: 4 (lower is better)
Translates to: WGPLSCLPHRNSRVLDIFVPSPS*LGATTL
Trigger: GAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGAC...AAAAATGTCAAGGACCCTGGAATTACGGTGAGGTAGGCAGGATAATGGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACTCCATCATGGGGGCTaGTGGCAGAATTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SQALRAHGAALGLQDDLGLHHGG*WQNSVS
Trigger: AGAAACTGAATTCTGCCAGCAGCCCCCATGATGGAG...TCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TGCCTGAATGTGGTGGCTCTTAGGGTAACCCCAGAATCCTCACTGCGGCAACAAGTTCCGCAGCCCCTGTaGCTTCTCATCACGATGCTG +
Preference number: 4 (lower is better)
Translates to: CLNVVALRVTPESSLRQQVPQPL*LLITML
Trigger: CAGCATCGTGATGAGAAGGCACAGGGGCTGCGGAAC...TTGTTGCCGCAGTGAGGATTCTGGGGTTACCCTAAGAGCCACCACATTCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR GCA 90 bp CGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCAGGAACTTCTACCAGGGGCTaGACGGCACTCAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RQNSRLLSEAPGTNMTSGTSTRG*TALRSQ
Trigger: CTGACTCCTGAGTGCCGTGCAGCCCCTGGTAGAAGT...TCCTGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR GCA 90 bp ACTGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCGGGGTGCGTGGGGTCTaGTACACGCTTGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: TGQGLAFRVPRSPTDTSGGVRGV*YTLGEK
Trigger: TTTCTCACCAAGCGTGTAGCAGACCCCACGCACCCC...GCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CTGAATGTGGTGGCTCTTAGGGTAACCCCAGAATCCTCACTGCGGCAACAAGACCCCCAGAATCCTCACTaGGGCAACAAGACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LNVVALRVTPESSLRQQDPQNPH*GNKTWP
Trigger: TGGCCAGGTCTTGTTGCCGCAGTGAGGATTCTGGGG...GTCTTGTTGCCGCAGTGAGGATTCTGGGGTTACCCTAAGAGCCACCACATTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp GGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTCCACTGGGCTGTTaGCAGACTCCTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GHFLKLESMVLCTGHTSWCPLGC*QTPRPS
Trigger: TGACGGCCGAGGAGTCTGCCAACAGCCCAGTGGACA...CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp AGGTCAGCGCGGCATCAGGATGCACTGCAGAGTTGTGGGCTCCATTTCCATCTTTGGTGTTGTGTCCACTaGGCTGTTGGCAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: RSARHQDALQSCGLHFHLWCCVH*AVGRLL
Trigger: GAGGAGTCTGCCAACAGCCCAGTGGACACAACACCA...AAGATGGAAATGGAGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR CCA 90 bp ATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGTTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: MKTSVRPAASPGSTPAFRFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...CCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGTGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRCSARC*QRRAKA
Trigger: CGCCTTTGCACGACGCTGCCAACAACGGGCACTACA...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp GCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCTGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: AGHNGHFLKLESMVLCTGCSARC*QRRAKA
Trigger: CGCCTTTGCACGACGCTGCCAACAACGGGCACTACA...GCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp AGGTCAGCGCGGCATCAGGATGCACTGCAGAGTTGTGGGCTCCATTTCCATCTTGGTTCTGGGATTCCGTaGTCGGCAATGGTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: RSARHQDALQSCGLHFHLGSGIP*SAMVRD
Trigger: GTCTCTCACCATTGCCGACCACGGAATCCCAGAACC...AAGATGGAAATGGAGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
CDS-3UTR CCA 90 bp AGAGGGCACAGCTCGGCCTTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGTCAGGCTTACAATTGTaGAGGTCAGAGGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RGHSSALRVGKAKTRFPVSGLQL*RSEVKV
Trigger: CACCTTGACCTCTGACCTCCACAATTGTAAGCCTGA...CACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AGCCTTGCTGTCCTGCCTGCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACTCATCACCAGCAACCTaGATTTCCTATGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SLAVLPATRGSPRSSDEDSSPAT*ISYAQN
Trigger: GTTCTGGGCATAGGAAATCCAGGTTGCTGGTGATGA...GTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGCAGGCAGGACAGCAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGCCAGAAGGGGAAAGCTaGGGGCAGACAGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: GHFLKLESMVLCTGHTSWPEGES*GQTEGT
Trigger: TGTGCCCTCTGTCTGCCCCCAGCTTTCCCCTTCTGG...CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp ATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGTATGGTTCTGTGCACTaGCCACACCTCTTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: MKTSVRPAASPGSTPAFRYGSVH*PHLLVL
Trigger: TAACACCAAGAGGTGTGGCCAGTGCACAGAACCATA...CCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGACAGCAATGGCCAGGCTaGGCTTGCTGCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VYGSVHWPHLLVLPHSRRQQWPG*ACCRGA
Trigger: TGCTCCTCTGCAGCAAGCCCAGCCTGGCCATTGCTG...TCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CTGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTCCCTGGAAGGTGACTTaGCTGTCCCTGCCTAGACTC +
Preference number: 4 (lower is better)
Translates to: LGKVWHSEFQEVPQIPVAPWKVT*LSLPRL
Trigger: GAGTCTAGGCAGGGACAGCCAAGTCACCTTCCAGGG...AGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp CTGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTTCTTCCCTCCAGGAATaGGGAAGCAGGAGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: LGKVWHSEFQEVPQIPVASSLQE*GSRSRQ
Trigger: CTGACGGCTCCTGCTTCCCCATTCCTGGAGGGAAGA...AGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp TTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCATCTTCCCTCCAGGAATaGGGAAGCAGGAGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: LSPLALGKVWHSEFQEVPSSLQE*GSRSRQ
Trigger: CTGACGGCTCCTGCTTCCCCATTCCTGGAGGGAAGA...TGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp GGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGATCCCACAGATACCAGTaGCTAAGTCTGTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GAKHLTLKEPACAWQHCRSHRYQ*LSLSSL
Trigger: GAGGGAAGACAGACTTAGCCACTGGTATCTGTGGGA...TCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp GAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCGCACTGGGCAAGGTCTaGCATTCAGAGTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: EGAKHLTLKEPACAWQHCALGKV*HSEFQE
Trigger: TTCTTGGAACTCTGAATGCCAGACCTTGCCCAGTGC...GCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp CTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCTTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: LHGALMKTSVRPAASPGSFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...GCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GGGATTCCGTGGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTTCTCGTGAGTTTTCTATGGTaGCTACACAAAACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GIPWSAMVRDRLQKGPFLVSFLW*LHKTSG
Trigger: GCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCAC...GAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR TCA 90 bp AGTGCCCACTGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTCAGAGACAACCATGGTaGCACAGCTCTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SAHCSWAGHNGHFLKLESQRQPW*HSSFQL
Trigger: CAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTG...AGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCAGGCACAGCTCGGCCTTaGGGGTGGGCAAGGCGAAAA +
Preference number: 4 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSGTARP*GWARRK
Trigger: TTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCC...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTCCTCCCCTGCAGCACTaGGCGAATCCCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSPPLQH*ANPRHC
Trigger: GCAGTGTCTGGGATTCGCTCAGTGCTGCAGGGGAGG...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CAGGAAAAGACTGAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: QEKTEGAKHLTLKEPACAPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...GGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTCAGTCTTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000647238.1
CDS-3UTR GCA 90 bp ATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: MVLCTGHTSWCYLIPDEGPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: AGHNGHFLKLESMVLCTGRGSSS*CGALGH
Trigger: GTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCT...GCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTGTTCACCTCCGCACCTaGAGCCAGCAGCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSVHLRT*SQQLLR
Trigger: GCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTGAAC...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp AGTCCTTTTTCAATAGGTGCTTGTCGTCCACCGGAGGAACCCTGTCCTGCTCGTGGAGGAACCCTGTCCTaGTCGTCGTCCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: SPFSIGACRPPEEPCPARGGTLS*SSSSSN
Trigger: GTTTGATGAGGACGACGAGCAGGACAGGGTTCCTCC...ACGAGCAGGACAGGGTTCCTCCGGTGGACGACAAGCACCTATTGAAAAAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp TTCTGGGATTCCGTGGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTGAACACACTCAACGATaGAGACACCTGCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: FWDSVVGNGERPSAEGALEHTQR*RHLLVL
Trigger: AAGAACCAGCAGGTGTCTGCATCGTTGAGTGTGTTC...AAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
CDS-3UTR GCA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGGTCAGAGGTCAAGGTaGTGGCAGGGCAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDGQRSR*WQGRIL
Trigger: AAGGATCCTGCCCTGCCAGCACCTTGACCTCTGACC...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AGAGGGCACAGCTCGGCCTTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGAACCTGGATTTCCTATaGCCAGAACAGCAATGCACT +
Preference number: 4 (lower is better)
Translates to: RGHSSALRVGKAKTRFPVNLDFL*PEQQCT
Trigger: AGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTT...CACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCAGGAGAAGGAACCAGCATGTaGCTGGCAGCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RQNSRLLSEAPGTNMTSGEGTSM*LAALQR
Trigger: TCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTC...TCCTGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp TTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGTGAGTCTATGGTTCTGTaGACTGGCCACACCTCTTGG +
Preference number: 4 (lower is better)
Translates to: FCALATPLGVTSFQTRVGESMVL*TGHTSW
Trigger: CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC...ACCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCGTGACCCCTCAGCCTTaGTGTCCTGCCTGCAACCAG +
Preference number: 4 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCVTPQP*CPACNQ
Trigger: CTGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCAC...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCGTGACCCCTCAGCCTTaGTGTCCTGCCTGCAACCAG +
Preference number: 4 (lower is better)
Translates to: HNGHFLKLESMVLCTGHTVTPQP*CPACNQ
Trigger: CTGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCAC...GGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CTGAATGTGGTGGCTCTTAGGGTAACCCCAGAATCCTCACTGCGGCAACAAGACGCCTTCTCATCACGATaGTGCACAGCCGACCACACA +
Preference number: 4 (lower is better)
Translates to: LNVVALRVTPESSLRQQDAFSSR*CTADHT
Trigger: TGTGTGGTCGGCTGTGCAGCATCGTGATGAGAAGGC...GTCTTGTTGCCGCAGTGAGGATTCTGGGGTTACCCTAAGAGCCACCACATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR GCA 90 bp GGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTAAGCGCTTGGTGAGAAACTaGATCAGGGCTTCCCGCCGT +
Preference number: 4 (lower is better)
Translates to: GKVWHSEFQEVPQIPVAKRLVRN*IRASRR
Trigger: ACGGCGGGAAGCCCTGATGCAGTTTCTCACCAAGCG...CTTAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp TTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCAAGGGGTGCGTGGGGTCTaGTACACGCTTGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: FTHLSPLALGKVWHSEFQGVRGV*YTLGEK
Trigger: TTTCTCACCAAGCGTGTAGCAGACCCCACGCACCCC...TTGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCTGGTGTTGTGTCCACTaGGCTGTTGGCAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCWCCVH*AVGRLL
Trigger: GAGGAGTCTGCCAACAGCCCAGTGGACACAACACCA...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACTGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDCSARC*QRRAKA
Trigger: CGCCTTTGCACGACGCTGCCAACAACGGGCACTACA...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp TCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGCAGAGGTCAAGGTGCTaGCAGGGCAGGATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SMVLCTGHTSWCYLIPDEQRSRC*QGRILP
Trigger: AGGAAGGATCCTGCCCTGCCAGCACCTTGACCTCTG...CTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACCAGAGGTCAAGGTGCTaGCAGGGCAGGATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GHNGHFLKLESMVLCTGHQRSRC*QGRILP
Trigger: AGGAAGGATCCTGCCCTGCCAGCACCTTGACCTCTG...GTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TGGGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTGCCTACCTCACCGTATCATCACCAGCAACCTaGATTTCCTATGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: WGSQHGHLGGHYPAYLTVSSPAT*ISYAQN
Trigger: GTTCTGGGCATAGGAAATCCAGGTTGCTGGTGATGA...TACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TGGGGGCCATTATCCTGCCTACCTCACCGTAATTCCAGGGTCCTTGACATTTTTCTGTGCCCCACATCATaGAACCGGCTAGCTACGGGG +
Preference number: 4 (lower is better)
Translates to: WGPLSCLPHRNSRVLDIFLCPTS*NRLATG
Trigger: CCCCGTAGCTAGCCGGTTCCATGATGTGGGGCACAG...AAAAATGTCAAGGACCCTGGAATTACGGTGAGGTAGGCAGGATAATGGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAATCTTATGGTTCTGTGCACTaGCCACACCTCTTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: ALRAHGAALGLQDDLGQSYGSVH*PHLLVL
Trigger: TAACACCAAGAGGTGTGGCCAGTGCACAGAACCATA...AGATTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCCAGCAATGGCCAGGCTaGGCTTGCTGCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HNGHFLKLESMVLCTGHTQQWPG*ACCRGA
Trigger: TGCTCCTCTGCAGCAAGCCCAGCCTGGCCATTGCTG...GGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CCTCGGGTTCTAACCTCTCCTGCTTCTGGCATCTCTCAGACTCAGCAGGAAAGGACAACACGGGCATCTTaGGGGCCATTATCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: PRVLTSPASGISQTQQERTTRAS*GPLSCL
Trigger: TAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGT...CCTTTCCTGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTTAGAACCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTAGCTTTAAGGGCCCATaGGGCTGCCCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSSFKGP*GCPGPA
Trigger: TGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCT...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CCCACCCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACAACCTCTCCTGCTTCTaGCATCTCTCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: PTPPEQAVSQVSSLRPRHNLSCF*HLSDSA
Trigger: TGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTT...GTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AGCCTCTTCAACTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATCTGCAGCTGAGCGGGTaGGAGAAGCCTCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: SLFNFTHLSPLALGKVWHLQLSG*EKPLQL
Trigger: AAGTTGAAGAGGCTTCTCCCACCCGCTCAGCTGCAG...ATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
3UTR CAA 72 bp TGCTTGAGGCCTTTTTCGAACTCGGAGTCCGTGTTGTaGCCGTCGACTGAACTGGAAGGTGCGAAGGATGGT +
Preference number: 4 (lower is better)
Translates to: CLRPFSNSESVL*PSTELEGAKDG
Trigger: ACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCCTCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
3UTR CAA 72 bp CGTCAGGTCAGCGCGGCATCAGGATGCACTGCAGAGTaGTGGGCTCCATTTCCATCTTCCACGTATATGTCA +
Preference number: 4 (lower is better)
Translates to: RQVSAASGCTAE*WAPFPSSTYMS
Trigger: TGACATATACGTGGAAGATGGAAATGGAGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCTGACCTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
CDS-3UTR TCA 90 bp CATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTAAGTCTGTCTTCCCTCCACCATGTCGCTGCTaGGGGGAAGCTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HSEFQEVPQIPVAKSVFPPPCRC*GEALPA
Trigger: AGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGG...AGGGAAGACAGACTTAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp TGGGGGTCACAACACGGGCATCTTGGGGGCCATTATCCTGCCTACCTCACCGTATTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: WGSQHGHLGGHYPAYLTVFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...TACGGTGAGGTAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGTGACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACAGGGACTCAGTGTTCTaGGTTCCCTGCTCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDRDSVF*VPCSSQ
Trigger: CTGAGACGAGCAGGGAACTCAGAACACTGAGTCCCT...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGACACCAGGAACAAACATaGCGTCAGGAAAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: GAKHLTLKEPACAWQHCRHQEQT*RQEKTE
Trigger: TTCAGTCTTTTCCTGACGTCATGTTTGTTCCTGGTG...TCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp TTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGCCGTCTCCTATCTaGGGCACCAGGAACAAACAT +
Preference number: 4 (lower is better)
Translates to: LSPLALGKVWHSEFQEVPQPSPI*GTRNKH
Trigger: ATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTG...TGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp CGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCAGGACAGCCGTCTCCTATCTaGGGCACCAGGAACAAACAT +
Preference number: 4 (lower is better)
Translates to: RQNSRLLSEAPGTNMTSGQPSPI*GTRNKH
Trigger: ATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTG...TCCTGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp AGCCGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCACTGCTACACGCTTGGTaGGAAACTGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SRQNSRLLSEAPGTNMTSLLHAW*ETASGL
Trigger: AAGCCCTGATGCAGTTTCTCACCAAGCGTGTAGCAG...TGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp TGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: WAGHNGHFLKLESMVLCTPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...AGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp TGGGGGCCATTATCCTGCCTACCTCACCGTAATTCCAGGGTCCTTGACATTTTTCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: WGPLSCLPHRNSRVLDIFLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...AAAAATGTCAAGGACCCTGGAATTACGGTGAGGTAGGCAGGATAATGGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRLLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGCCAGGGACACTTTTATaGTTTTCGGTCTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: EVLDVDVCPLADELFDAPPGTLL*FSVCSF
Trigger: GAAAGAGCAGACCGAAAAGCATAAAAGTGTCCCTGG...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp TTTCCGAAAGGTAGCCAGGGACACTTTTATGCTTTTCGGTCTGCTCTTTCCTCTGTCCCGCCCGGCCTCTaGGGACTCTCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FPKGSQGHFYAFRSALSSVPPGL*GLSPLL
Trigger: AAGAAGAGGAGAGAGTCCGCAGAGGCCGGGCGGGAC...AGAGGAAAGAGCAGACCGAAAAGCATAAAAGTGTCCCTGGCTACCTTTCGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCGGAGCGTACCAGCCTTaGAGCACCACAACAGGGACT +
Preference number: 4 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCGAYQP*STTTGT
Trigger: AGTCCCTGTTGTGGTGCTGCAAGGCTGGTACGCTCC...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp ACTGAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACGAACACACTCAACGATaGAGACACCTGCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: TEGAKHLTLKEPACAWQHEHTQR*RHLLVL
Trigger: AAGAACCAGCAGGTGTCTGCATCGTTGAGTGTGTTC...GTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR GCA 90 bp CTGCTCAAATCCAACCAGACCTACACGGCTAGCGGATACGAGCCTTTCATAGATGGTCAGAGGTCAAGGTaGTGGCAGGGCAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: LLKSNQTYTASGYEPFIDGQRSR*WQGRIL
Trigger: AAGGATCCTGCCCTGCCAGCACCTTGACCTCTGACC...ATCTATGAAAGGCTCGTATCCGCTAGCCGTGTAGGTCTGGTTGGATTTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GGTAAGGGTGGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCACAGAACCACCCAGATaGCAGGACAGGCCGGATGTG +
Preference number: 4 (lower is better)
Translates to: GKGGHMTDRDNHGDTALFTEPPR*QDRPDV
Trigger: CACATCCGGCCTGTCCTGGCATCTGGGTGGTTCTGT...GAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACCACCCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
CDS-3UTR GCA 90 bp AACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGGCTGAGACCTCTCAGTaGCCACTGCTCCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: NVYYRLLSPTESVSSSCVAETSQ*PLLLGR
Trigger: CCGGCCCAGGAGCAGTGGGCACTGAGAGGTCTCAGC...CACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTACACCTGCCCTCCCCTaGAGCACTGAGCGAATCCCA +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSTPALP*STERIP
Trigger: TGGGATTCGCTCAGTGCTGCAGGGGAGGGCAGGTGT...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AACTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCAAGCTCTTCCTGCTGTaGTGCTTTAGGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: NFTHLSPLALGKVWHSEFKLFLL*CFRAPT
Trigger: GGTGGGTGCCCTAAAGCACCACAGCAGGAAGAGCTT...GAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567736.6
ENST00000647238.1
CDS-3UTR CCA 90 bp CCCACCCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTCATCACCAGCAACCTaGATTTCCTATGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PTPPEQAVSQVSSLRPRHSSPAT*ISYAQN
Trigger: GTTCTGGGCATAGGAAATCCAGGTTGCTGGTGATGA...GTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AGCGGATACGAGCCTTTCATAGATGGCACTTGCTGGGAAACCTGTGAGAGGCCGACTGGCCACACCTCTTaGTGTTACCTCATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SGYEPFIDGTCWETCERPTGHTS*CYLIPD
Trigger: GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGT...CGGCCTCTCACAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCGTATCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AGCGGATACGAGCCTTTCATAGATGGCACTTGCTGGGAAACCTGTGAGAGGCCGCATCATGGGGGCTGCTaGCAGAATTCAGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SGYEPFIDGTCWETCERPHHGGC*QNSVSC
Trigger: GCAAGAAACTGAATTCTGCCAGCAGCCCCCATGATG...CGGCCTCTCACAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCGTATCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCTCCTTTCCTCCATCATaGGGGCTGCTGGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCSFPPS*GLLAEF
Trigger: GAATTCTGCCAGCAGCCCCCATGATGGAGGAAAGGA...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR CAA 72 bp TTGTGCTTGAGGCCTTTTTCGAACTCGGAGTCCGTGTaGTTGCCGTCGACTGAACTGGAAGGTGCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: LCLRPFSNSESV*LPSTELEGAKD
Trigger: ATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCCTCAAGCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp GGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGACCACGTATATGTCACTaGGATCACGATTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: GAKHLTLKEPACAWQHCRPRICH*DHDSFG
Trigger: TCCAAAAGAATCGTGATCTCAGTGACATATACGTGG...TCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR TCA 90 bp GCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCTTTCCAGTTCGTGTGTaGCATGTTCTATTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: ATRGSPRSSDEDISETRRFPVRV*HVLLLN
Trigger: ATTCAACAATAGAACATGTCACACACGAACTGGAAA...GCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp AGCCTCTTCAACTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATACGTCAGGAAAAGACTaGAGGTGCCAAGCACCTAAC +
Preference number: 4 (lower is better)
Translates to: SLFNFTHLSPLALGKVWHTSGKD*RCQAPN
Trigger: GTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACGT...ATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAAGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp CCCACCCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACCCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PTPPEQAVSQVSSLRPRHPLSKA*VYGSVH
Trigger: GTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGG...GTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CTGCTCAAATCCAACCAGACCTACACGGCTAGCGGATACGAGCCTTTCATAGATAGGGACTCAGTGTTCTaGGTTCCCTGCTCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LLKSNQTYTASGYEPFIDRDSVF*VPCSSQ
Trigger: CTGAGACGAGCAGGGAACTCAGAACACTGAGTCCCT...ATCTATGAAAGGCTCGTATCCGCTAGCCGTGTAGGTCTGGTTGGATTTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GAGAAACTGCATCAGGGCTTCCCGCCGTGTGTTGCTAACATCCCCACACACGTGCACCAGGAACAAACATaGCGTCAGGAAAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: EKLHQGFPPCVANIPTHVHQEQT*RQEKTE
Trigger: TTCAGTCTTTTCCTGACGTCATGTTTGTTCCTGGTG...CACGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGCCCTGATGCAGTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp CCGTGTGTTGCTAACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCAACACACCAGGAACAAACATaGCGTCAGGAAAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: PCVANIPTHVSALGPSSTHQEQT*RQEKTE
Trigger: TTCAGTCTTTTCCTGACGTCATGTTTGTTCCTGGTG...TGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp CGTCAGGAAAAGACTGAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTCTGCTACACGCTTGGTaGGAAACTGCATCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RQEKTEGAKHLTLKEPACLLHAW*ETASGL
Trigger: AAGCCCTGATGCAGTTTCTCACCAAGCGTGTAGCAG...ACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp CTGCCTGCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCTCATCATCAACCGTCTaGGATTCCATAGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: LPATRGSPRSSDEDISETSSSTV*DSIAES
Trigger: ACTTTCAGCTATGGAATCGCAGACGGTTGATGATGA...GGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642695.1
ENST00000643964.1
CDS-3UTR GCA 90 bp CACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCTCATCATCAACCGTCTaGGATTCCATAGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: HLTLKEPACAWQHCREHTSSSTV*DSIAES
Trigger: ACTTTCAGCTATGGAATCGCAGACGGTTGATGATGA...GGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647238.1
CDS-3UTR GCA 90 bp CACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCCCTTGGGCATCGTCCTaGTCCTCACCCGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: HNGHFLKLESMVLCTGHTPWASS*SSPDLH
Trigger: ATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGG...GGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp ATCTGTCATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTCGGTTACAGGCCTCGTaGAGCGCCGTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: ICHNVYYRLLSPTESVSSRLQAS*SAVQPA
Trigger: CGCAGGCTGGACGGCGCTGCACGAGGCCTGTAACCG...ACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATGACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: GHFLKLESMVLCTGHTSWLLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDLLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGAAGTGGTCGCGATCGTaGTTTAACACTTTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: EVLDVDVCPLADELFDAPKWSRS*FNTFSL
Trigger: CAAGCTAAAAGTGTTAAAGCACGATCGCGACCACTT...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR GCA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCAACGATGCAGACACCTaGTGGTTCTTCCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCNDADT*WFFPRQ
Trigger: CTGCCTCGGGAAGAACCAGCAGGTGTCTGCATCGTT...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR GCA 90 bp CAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAATGCCCAGAACAGCAATaGACTGAACTCAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: QALRAHGAALGLQDDLGQCPEQQ*TELKYK
Trigger: TTTGTACTTGAGTTCAGTGCATTGCTGTTCTGGGCA...TTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CGTCAGGAAAAGACTGAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTAAAGAAACATCCACGTaGAGAGGGCAGGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: RQEKTEGAKHLTLKEPACKETST*RGQAAS
Trigger: CGAAGCTGCCTGCCCTCTGCACGTGGATGTTTCTTT...ACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000568924.1
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp AACTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCAAAGAAACATCCACGTaGAGAGGGCAGGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: NFTHLSPLALGKVWHSEFKETST*RGQAAS
Trigger: CGAAGCTGCCTGCCCTCTGCACGTGGATGTTTCTTT...GAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR GCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTACAGAACCACCCAGATaGCAGGACAGGCCGGATGTG +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSTEPPR*QDRPDV
Trigger: CACATCCGGCCTGTCCTGGCATCTGGGTGGTTCTGT...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAAAACTCGCTTTCCTGTaGCCCACATCATGGAACCGG +
Preference number: 4 (lower is better)
Translates to: VYGSVHWPHLLVLPHSRRKLAFL*PTSWNR
Trigger: CCGGTTCCATGATGTGGGGCACAGGAAAGCGAGTTT...TCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACAAACTCGCTTTCCTGTaGCCCACATCATGGAACCGG +
Preference number: 4 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDKLAFL*PTSWNR
Trigger: CCGGTTCCATGATGTGGGGCACAGGAAAGCGAGTTT...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGAGTCTATGGTTCTGTaGACTGGCCACACCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VYGSVHWPHLLVLPHSRRESMVL*TGHTSW
Trigger: CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC...TCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCTCCATCATGGGGGCTaGTGGCAGAATTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: AGHNGHFLKLESMVLCTGLHHGG*WQNSVS
Trigger: AGAAACTGAATTCTGCCAGCAGCCCCCATGATGGAG...GCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp GAGAAGCCTCTTCAACTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGTTCTCATCACGATGCTaGACAGCCGACCACACAACA +
Preference number: 4 (lower is better)
Translates to: EKPLQLHTLVASSTGQGLFSSRC*TADHTT
Trigger: TGTTGTGTGGTCGGCTGTGCAGCATCGTGATGAGAA...CAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAAGAGGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CCA 90 bp CCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGTTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: PTGTSRFSSELFKAKALWFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...CCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp ATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTACTGGCCACACCTCTTaGTGTTACCTCATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: MVLCTGHTSWCYLIPDEGTGHTS*CYLIPD
Trigger: GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGT...ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGACTGGCCACACCTCTTaGTGTTACCTCATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRTGHTS*CYLIPD
Trigger: GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGT...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGAACCTCTCCTGCTTCTaGCATCTCTCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRNLSCF*HLSDSA
Trigger: TGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTT...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TTCCTGTGCCCCACATCATGGAACCGGCTAGCTACGGGGAAACAAAGCTACAGAAACCTCTCCTGCTTCTaGCATCTCTCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: FLCPTSWNRLATGKQSYRNLSCF*HLSDSA
Trigger: TGCTGAGTCTGAGAGATGCCAGAAGCAGGAGAGGTT...TCTGTAGCTTTGTTTCCCCGTAGCTAGCCGGTTCCATGATGTGGGGCACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CCA 90 bp CTGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTTCCCACAGATACCAGTaGCTAAGTCTGTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LGKVWHSEFQEVPQIPVASHRYQ*LSLSSL
Trigger: GAGGGAAGACAGACTTAGCCACTGGTATCTGTGGGA...AGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp AGCCTCTTCAACTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATGCACTGGGCAAGGTCTaGCATTCAGAGTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLFNFTHLSPLALGKVWHALGKV*HSEFQE
Trigger: TTCTTGGAACTCTGAATGCCAGACCTTGCCCAGTGC...ATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CCA 90 bp TGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTTCATCATCAACCGTCTaGCCTTGTTCCTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: WAGHNGHFLKLESMVLCTSSSTV*PCSSTA
Trigger: TGCCGTGGAGGAACAAGGCCAGACGGTTGATGATGA...AGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642333.1
CDS-3UTR TCA 90 bp CGTGGCCTTCTGTGGCTCTGGGTTCTTGGCCTTGTGCTTGAGGCCTTTTTCGAAGCTGAAAGTCAGTGCTaGCGAGGACTGTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: RGLLWLWVLGLVLEAFFEAESQC*RGLSFK
Trigger: TTTAAAAGACAGTCCTCGTCAGCACTGACTTTCAGC...TTCGAAAAAGGCCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp CTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCACTGCGATTCCATAGCTaGAAGTCAGTGCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: LESMVLCTGHTSWCYLIPLRFHS*KSVLTR
Trigger: CCTCGTCAGCACTGACTTTCAGCTATGGAATCGCAG...TGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642695.1
ENST00000643964.1
ENST00000646975.1
CDS-3UTR TCA 90 bp CGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTTTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: RLGAGGSLHARFSCSLYLFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...AAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR TCA 90 bp CCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGTTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: PTGTSRFSSELFKAKALWFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...CCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp AGCGGATACGAGCCTTTCATAGATGGCACTTGCTGGGAAACCTGTGAGAGGCCGGTGAGTTTTCTATGGTaGCTACACAAAACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SGYEPFIDGTCWETCERPVSFLW*LHKTSG
Trigger: GCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCAC...CGGCCTCTCACAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCGTATCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GTCTGCAGAAGGGGCCCTTTCTCTGACACGCCTGCCACTGTGCTCACTGGTGCATTTCCAGTTCGTGTGTaGCATGTTCTATTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: VCRRGPFSDTPATVLTGAFPVRV*HVLLLN
Trigger: ATTCAACAATAGAACATGTCACACACGAACTGGAAA...TGCACCAGTGAGCACAGTGGCAGGCGTGTCAGAGAAAGGGCCCCTTCTGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR TCA 90 bp GTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGAATCTCTCCCTTGCTTaGTTTTACAAGGGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: VLCTGHTSWCYLIPDEGGNLSLA*FYKGKG
Trigger: ACCCTTACCCTTGTAAAATCAAGCAAGGGAGAGATT...CCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000644784.1
CDS-3UTR TCA 90 bp AACTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCACGTCAGGAAAAGACTaGAGGTGCCAAGCACCTAAC +
Preference number: 4 (lower is better)
Translates to: NFTHLSPLALGKVWHSEFTSGKD*RCQAPN
Trigger: GTTAGGTGCTTGGCACCTTCAGTCTTTTCCTGACGT...GAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR TCA 90 bp AGCGGATACGAGCCTTTCATAGATGGCACTTGCTGGGAAACCTGTGAGAGGCCGCCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SGYEPFIDGTCWETCERPPLSKA*VYGSVH
Trigger: GTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGG...CGGCCTCTCACAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCGTATCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp TTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAAGACCCCCACAGAGGCTaGGACCTCTCAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: LSPTESVSSSCVTCSIVEDPHRG*DLSVPT
Trigger: AGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTC...TTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCAAGGGACTCAGTGTTCTaGGTTCCCTGCTCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSRDSVF*VPCSSQ
Trigger: CTGAGACGAGCAGGGAACTCAGAACACTGAGTCCCT...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTCCTCCCCTGCAGCACTaGGCGAATCCCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: HNVYYRLLSPTESVSSSCPPLQH*ANPRHC
Trigger: GCAGTGTCTGGGATTCGCTCAGTGCTGCAGGGGAGG...ACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTAACCTGGATTTCCTATaGCCAGAACAGCAATGCACT +
Preference number: 4 (lower is better)
Translates to: RLGAGGSLHARFSCSLYLNLDFL*PEQQCT
Trigger: AGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTT...AAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp TCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAATCAGTCCCCAGTCCCAGCTaGTTAGGGGCCACCACACTC +
Preference number: 4 (lower is better)
Translates to: SPTESVSSSCVTCSIVESVPSPS*LGATTL
Trigger: GAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGAC...TGATTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGCTCCATCATGGGGGCTaGTGGCAGAATTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SMVLCTGHTSWCYLIPDELHHGG*WQNSVS
Trigger: AGAAACTGAATTCTGCCAGCAGCCCCCATGATGGAG...CTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTGTGTCCACTaGGCTGTTGGCAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSWCCVH*AVGRLL
Trigger: GAGGAGTCTGCCAACAGCCCAGTGGACACAACACCA...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCTTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp TGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: CSWAGHNGHFLKLESMVLFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...CAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp ATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTTCAGGCTTACAATTGTaGAGGTCAGAGGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: MVLCTGHTSWCYLIPDEGSGLQL*RSEVKV
Trigger: CACCTTGACCTCTGACCTCCACAATTGTAAGCCTGA...ACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGTCAGGCTTACAATTGTaGAGGTCAGAGGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRSGLQL*RSEVKV
Trigger: CACCTTGACCTCTGACCTCCACAATTGTAAGCCTGA...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGTATGGTTCTGTGCACTaGCCACACCTCTTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: LWFCALATPLGVTSFQTRYGSVH*PHLLVL
Trigger: TAACACCAAGAGGTGTGGCCAGTGCACAGAACCATA...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp TGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTATGGTTCTGTGCACTaGCCACACCTCTTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: CSWAGHNGHFLKLESMVLYGSVH*PHLLVL
Trigger: TAACACCAAGAGGTGTGGCCAGTGCACAGAACCATA...CAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CCA 90 bp TCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAATCAAGCTTTAAGGGCCCATaGGGCTGCCCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SPTESVSSSCVTCSIVESSFKGP*GCPGPA
Trigger: TGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCT...TGATTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCGTGAGTTTTCTATGGTaGCTACACAAAACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: AGHNGHFLKLESMVLCTGVSFLW*LHKTSG
Trigger: GCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCAC...GCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTTCATCATCAACCGTCTaGGATTCCATAGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: RLGAGGSLHARFSCSLYLSSSTV*DSIAES
Trigger: ACTTTCAGCTATGGAATCGCAGACGGTTGATGATGA...AAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000643964.1
ENST00000645278.1
CDS-3UTR GCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVVSESF*SPLAPA
Trigger: CGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACAC...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp CATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTTCCTCGGCCGTCATCTaGATGAGAAGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: HNVYYRLLSPTESVSSSCSSAVI*MRRATC
Trigger: GCAGGTGGCCCTTCTCATGCAGATGACGGCCGAGGA...ACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGCTTGACGTTGACGTCTaGCCCCTCGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: NVYYRLLSPTESVSSSCVLDVDV*PLADEL
Trigger: GAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAG...CACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp ATCTGTCATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTGTTCACCTCCGCACCTaGAGCCAGCAGCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: ICHNVYYRLLSPTESVSSVHLRT*SQQLLR
Trigger: GCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTGAAC...ACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATGACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTTGTTGGCAGCGTCGTaGAAAGGCGTGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSLLAAS*KGVSSS
Trigger: AGATGACGACACGCCTTTGCACGACGCTGCCAACAA...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp CACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTTCCGCTCAGGGCCCTaGTTCTCTTTCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: HNGHFLKLESMVLCTGHTFRSGP*FSFFLL
Trigger: AAGCAAGAAGAAAGAGAAGCAGGGCCCTGAGCGGAA...GGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp CGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTTGCCCAGAACAGCAATaGACTGAACTCAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: RLGAGGSLHARFSCSLYLCPEQQ*TELKYK
Trigger: TTTGTACTTGAGTTCAGTGCATTGCTGTTCTGGGCA...AAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR GCA 90 bp TGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGAACCTGGATTTCCTATaGCCAGAACAGCAATGCACT +
Preference number: 4 (lower is better)
Translates to: CSWAGHNGHFLKLESMVLNLDFL*PEQQCT
Trigger: AGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTT...CAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTGAGTCTATGGTTCTGTaGACTGGCCACACCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NGHFLKLESMVLCTGHTSESMVL*TGHTSW
Trigger: CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC...AGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGCTGAGCAGTCACCAGTaGAGCCTGCGTCAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVLSSHQ*SLRQGA
Trigger: CGCGCCCTGACGCAGGCTGCACTGGTGACTGCTCAG...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646838.1
CDS-3UTR CCA 90 bp CATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTCTGTGCCCCACATCATaGAACCGGCTAGCTACGGGG +
Preference number: 4 (lower is better)
Translates to: HNVYYRLLSPTESVSSSCLCPTS*NRLATG
Trigger: CCCCGTAGCTAGCCGGTTCCATGATGTGGGGCACAG...ACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCAACAACACGGGCATCTTaGGGGCCATTATCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSTTRAS*GPLSCL
Trigger: TAGGCAGGATAATGGCCCCCAAGATGCCCGTGTTGT...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGGCTGAAAGTCAGTGCTaGCGAGGACTGTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: GHFLKLESMVLCTGHTSWAESQC*RGLSFK
Trigger: TTTAAAAGACAGTCCTCGTCAGCACTGACTTTCAGC...CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646975.1
CDS-3UTR TCA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGTGAGTTTTCTATGGTaGCTACACAAAACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDVSFLW*LHKTSG
Trigger: GCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCAC...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGGTGAGTTTTCTATGGTaGCTACACAAAACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GHFLKLESMVLCTGHTSWVSFLW*LHKTSG
Trigger: GCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCAC...CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGGGCACAGCTCGGCCTTaGGGGTGGGCAAGGCGAAAA +
Preference number: 4 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVGTARP*GWARRK
Trigger: TTTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCC...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGAGAGGCCGTCCAGGCTaGCCCAGAAGGGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVRGRPG*PRRGKL
Trigger: CAGCTTTCCCCTTCTGGGTCAGCCTGGACGGCCTCT...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACCCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDPLSKA*VYGSVH
Trigger: GTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGG...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp GTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGACCACTTTCTAAAGCTTaGGTCTATGGTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VYGSVHWPHLLVLPHSRRPLSKA*VYGSVH
Trigger: GTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGG...TCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR GCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGCCTTGCTGTCCTGCCTaGAACCAGGGGCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVPCCPA*NQGLST
Trigger: CGTGGAGAGCCCCTGGTTGCAGGCAGGACAGCAAGG...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGGTCCCCAGTCCCAGCTaGTTAGGGGCCACCACACTC +
Preference number: 4 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVVPSPS*LGATTL
Trigger: GAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGAC...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCATTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: LESMVLCTGHTSWCYLIPFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...TGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR TCA 90 bp TGGGGGCCATTATCCTGCCTACCTCACCGTAATTCCAGGGTCCTTGACATTTTTTTTATCTTTGGTTTTTaGGGCAGAGTTGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: WGPLSCLPHRNSRVLDIFFIFGF*GRVGRS
Trigger: GGAACGCCCAACTCTGCCTCAAAAACCAAAGATAAA...AAAAATGTCAAGGACCCTGGAATTACGGTGAGGTAGGCAGGATAATGGCCCCCA
48% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTTCATCATCAACCGTCTaGGATTCCATAGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: WAGHNGHFLKLESMVLCTSSSTV*DSIAES
Trigger: ACTTTCAGCTATGGAATCGCAGACGGTTGATGATGA...AGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642695.1
ENST00000643964.1
ENST00000646975.1
CDS-3UTR GCA 90 bp GTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGATGCCCAGAACAGCAATaGACTGAACTCAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: VYGSVHWPHLLVLPHSRRCPEQQ*TELKYK
Trigger: TTTGTACTTGAGTTCAGTGCATTGCTGTTCTGGGCA...TCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCATCATCACCAGCAACCTaGATTTCCTATGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSSSPAT*ISYAQN
Trigger: GTTCTGGGCATAGGAAATCCAGGTTGCTGGTGATGA...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGCAGCAATGGCCAGGCTaGGCTTGCTGCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVQQWPG*ACCRGA
Trigger: TGCTCCTCTGCAGCAAGCCCAGCCTGGCCATTGCTG...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCTTTCCAGTTCGTGTGTaGCATGTTCTATTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCFPVRV*HVLLLN
Trigger: ATTCAACAATAGAACATGTCACACACGAACTGGAAA...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGGGTCAGAGGTCAAGGTaGTGGCAGGGCAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVGQRSR*WQGRIL
Trigger: AAGGATCCTGCCCTGCCAGCACCTTGACCTCTGACC...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TTTCCGAAAGGTAGCCAGGGACACTTTTATGCTTTTCGGTCTGCTCTTTCCTCTTTTTTGAGGCAGAGTTaGGCGTTCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: FPKGSQGHFYAFRSALSSFLRQS*AFPSDT
Trigger: TGTGTCAGAAGGGAACGCCCAACTCTGCCTCAAAAA...AGAGGAAAGAGCAGACCGAAAAGCATAAAAGTGTCCCTGGCTACCTTTCGGAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGCAGAGGTCAAGGTGCTaGCAGGGCAGGATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVQRSRC*QGRILP
Trigger: AGGAAGGATCCTGCCCTGCCAGCACCTTGACCTCTG...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGCGAGCCTTTCATAGATaGCACTTGCTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: NVYYRLLSPTESVSSSCVRAFHR*HLLGNL
Trigger: CAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCG...CACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAATCCTTTCCTCCATCATaGGGGCTGCTGGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: LSPTESVSSSCVTCSIVESFPPS*GLLAEF
Trigger: GAATTCTGCCAGCAGCCCCCATGATGGAGGAAAGGA...TTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp TCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGTTTCCAGTTCGTGTGTaGCATGTTCTATTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: SMVLCTGHTSWCYLIPDEFPVRV*HVLLLN
Trigger: ATTCAACAATAGAACATGTCACACACGAACTGGAAA...CTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTCAGAGACAACCATGGTaGCACAGCTCTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HNVYYRLLSPTESVSSSCQRQPW*HSSFQL
Trigger: CAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTG...ACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp TCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAATCAGCGAATCCCAGACACTaGAGAGCCTTTTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SPTESVSSSCVTCSIVESANPRH*RAFSSS
Trigger: TGAACTGGAAAAGGCTCTGCAGTGTCTGGGATTCGC...TGATTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp AACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGTCAGGCTTACAATTGTaGAGGTCAGAGGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: NVYYRLLSPTESVSSSCVSGLQL*RSEVKV
Trigger: CACCTTGACCTCTGACCTCCACAATTGTAAGCCTGA...CACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAATCAACTGGCCACACCTCTTaGTGTTACCTCATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SPTESVSSSCVTCSIVESTGHTS*CYLIPD
Trigger: GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGT...TGATTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp CACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTTTCCAGTTCGTGTGTaGCATGTTCTATTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: HNGHFLKLESMVLCTGHTFPVRV*HVLLLN
Trigger: ATTCAACAATAGAACATGTCACACACGAACTGGAAA...GGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR GCA 90 bp AACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGAACCTGGATTTCCTATaGCCAGAACAGCAATGCACT +
Preference number: 4 (lower is better)
Translates to: NVYYRLLSPTESVSSSCVNLDFL*PEQQCT
Trigger: AGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTT...CACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp CATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTTCATCACCAGCAACCTaGATTTCCTATGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: HNVYYRLLSPTESVSSSCSSPAT*ISYAQN
Trigger: GTTCTGGGCATAGGAAATCCAGGTTGCTGGTGATGA...ACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp ATCTGTCATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTCGAGCCTTTCATAGATaGCACTTGCTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: ICHNVYYRLLSPTESVSSRAFHR*HLLGNL
Trigger: CAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCG...ACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATGACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGCAGAGACAACCATGGTaGCACAGCTCTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVQRQPW*HSSFQL
Trigger: CAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTG...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR TCA 90 bp AACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGAATCTCTCCCTTGCTTaGTTTTACAAGGGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: NVYYRLLSPTESVSSSCVNLSLA*FYKGKG
Trigger: ACCCTTACCCTTGTAAAATCAAGCAAGGGAGAGATT...CACACACGAACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000644784.1
CDS-3UTR TCA 90 bp ATCTGTCATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTGCTGAAAGTCAGTGCTaGCGAGGACTGTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: ICHNVYYRLLSPTESVSSAESQC*RGLSFK
Trigger: TTTAAAAGACAGTCCTCGTCAGCACTGACTTTCAGC...ACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378332.7
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
CDS-3UTR GCA 90 bp ATCTGTCATAACGTTTACTATAGACTCTTGTCGCCCACAGAATCAGTTTCCAGTAACCTGGATTTCCTATaGCCAGAACAGCAATGCACT +
Preference number: 4 (lower is better)
Translates to: ICHNVYYRLLSPTESVSSNLDFL*PEQQCT
Trigger: AGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTT...ACTGGAAACTGATTCTGTGGGCGACAAGAGTCTATAGTAAACGTTATGACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CCA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGTCAGGCTTACAATTGTaGAGGTCAGAGGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVSGLQL*RSEVKV
Trigger: CACCTTGACCTCTGACCTCCACAATTGTAAGCCTGA...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
3UTR CAA 72 bp TGTCGCTCCGCTTTCCGAAGCGAACCTCTCTGCCTTTaGTTTCTTTCTTTCGCTTCTTTTTCACTTTATTTT +
Preference number: 4 (lower is better)
Translates to: CRSAFRSEPLCL*FLSFASFSLYF
Trigger: AAAATAAAGTGAAAAAGAAGCGAAAGAAAGAAACAAAAGGCAGAGAGGTTCGCTTCGGAAAGCGGAGCGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR TCA 90 bp AGAAACTTTATCTTTATCCTTTGGATCAGAACACACTCAACGATGCAGACACCTAATCTCTCCCTTGCTTaGTTTTACAAGGGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: RNFIFILWIRTHSTMQTPNLSLA*FYKGKG
Trigger: ACCCTTACCCTTGTAAAATCAAGCAAGGGAGAGATT...AGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGGATAAAGATAAAGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR CAA 90 bp GATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCCCTCCTTGTCCAGTTaGGGGACAGCGCCCTCCGCG +
Preference number: 5 (lower is better)
Translates to: DAPGVPADGGSVQAGLSTPSLSS*GTAPSA
Trigger: CGCGGAGGGCGCTGTCCCCAAACTGGACAAGGAGGG...CGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS CCA 90 bp GCTGAGCCAGGTCAGGGCCAGCACGGCGAGGGGCCTCAGGCGGCCTaGGCCCACAGAGCCAACGCGTGTGGAGGGCCCCTGGCTGTACCT +
Preference number: 5 (lower is better)
Translates to: AEPGQGQHGEGPQAA*AHRANACGGPLAVP
Trigger: AGGTACAGCCAGGGGCCCTCCACACGCGTTGGCTCTGTGGGCCCAGGCCGCCTGAGGCCCCTCGCCGTGCTGGCCCTGACCTGGCTCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS TCA 90 bp CCAGGGACGCCCTGCCTGGGCTGCTCCGGGCTGCCTGTGGAGGGCTaGCTGCAGGAGGGGCCGCGGGCTGGTACCTGTGTCCGAGTCCTT +
Preference number: 5 (lower is better)
Translates to: PGTPCLGCSGLPVEG*LQEGPRAGTCVRVL
Trigger: AAGGACTCGGACACAGGTACCAGCCCGCGGCCCCTCCTGCAGTCAGCCCTCCACAGGCAGCCCGGAGCAGCCCAGGCAGGGCGTCCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643147.1
CDS GCA 90 bp GGACGCCCTGCCTGGGCTGCTCCGGGCTGCCTGTGGAGGGCTGACTaGAGGAGGGGCCGCGGGCTGGTACCTGTGTCCGAGTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GRPAWAAPGCLWRAD*RRGRGLVPVSESFC
Trigger: GCAGAAGGACTCGGACACAGGTACCAGCCCGCGGCCCCTCCTGCAGTCAGCCCTCCACAGGCAGCCCGGAGCAGCCCAGGCAGGGCGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643147.1
CDS-3UTR CAA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTTCCTTCTGCTCCCCATaGGCGCCCGCGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGSFCSP*APAVKG
Trigger: GCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGA...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp GATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCAGCCTGCGAAGTCCTaGACGTTGACGTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: DAPGVPADGGSVQAGLSTQPAKS*TLTSAP
Trigger: GGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTG...CGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS CCA 90 bp CGGCGAGGGGCCTCAGGCGGCCTGGGCCCACAGAGCCAACGCGTGTaGAGGGCCCCTGGCTGTACCTCACGCCACCTGCGAGTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: RRGASGGLGPQSQRV*RAPGCTSRHLRVSV
Trigger: CACTGAAACTCGCAGGTGGCGTGAGGTACAGCCAGGGGCCCTCCACACGCGTTGGCTCTGTGGGCCCAGGCCGCCTGAGGCCCCTCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CCA 90 bp ACCCTGGGGTTCGACCCGAGAGCAGCCCCTCACGGTCTGAGGGTGTaGGAGCCGAGCGCCCAGGGACTGCCTGGCGAGGCTCTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: TLGFDPRAAPHGLRV*EPSAQGLPGEALGV
Trigger: CACACCCAGAGCCTCGCCAGGCAGTCCCTGGGCGCTCGGCTCCCACACCCTCAGACCGTGAGGGGCTGCTCTCGGGTCGAACCCCAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS-3UTR CAA 90 bp GCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: APSLMSSLMRRASPRMAASLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...AGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp CCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: PAASPGSTPAFRQDGAVRSLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...CCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS GCA 90 bp CAGAGCTTGGCAGGGTGGGGCCCGAGGGCGCCCGCTCCTGGATCCTaGACAACGTCCCTGACATGTCGGCCAGCAGCACAGACCCAGCCT +
Preference number: 5 (lower is better)
Translates to: QSLAGWGPRAPAPGS*TTSLTCRPAAQTQP
Trigger: AGGCTGGGTCTGTGCTGCTGGCCGACATGTCAGGGACGTTGTGCAGGATCCAGGAGCGGGCGCCCTCGGGCCCCACCCTGCCAAGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS-3UTR CAA 90 bp AGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: RPAASPGSTPAFRQDGAVSLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...GACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: ADELFDAPGVPADGGSVQSLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGCAGCCTGCGAAGTCCTaGACGTTGACGTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: PLADELFDAPGVPADGGSQPAKS*TLTSAP
Trigger: GGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTG...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS CCA 90 bp CTCAGGCGGCCTGGGCCCACAGAGCCAACGCGTGTGGAGGGCCCCTaGCTGTACCTCACGCCACCTGCGAGTTTCAGTGCCCAGGAATCC +
Preference number: 5 (lower is better)
Translates to: LRRPGPTEPTRVEGP*LYLTPPASFSAQES
Trigger: GGATTCCTGGGCACTGAAACTCGCAGGTGGCGTGAGGTACAGCCAGGGGCCCTCCACACGCGTTGGCTCTGTGGGCCCAGGCCGCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS-3UTR CAA 90 bp TTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCAAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: LMRRASPRMAARCRRVSPRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...TGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp TCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCCCACAGAGTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: SGRTGLSGTPRPLSTPTESLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...CTCTGTGGGGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp AGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCCAGCCTGCGAAGTCCTaGACGTTGACGTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: RPAASPGSTPAFRQDGAVQPAKS*TLTSAP
Trigger: GGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTG...GACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp GAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTTCGTCATCTAGGCCCTaGGTGTTCACCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: ELFDAPGVPADGGSVQAGSSSRP*VFTSAP
Trigger: AGGTGCGGAGGTGAACACCAAGGGCCTAGATGACGA...ACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGAACTCATACTCGTCCTaGACGGGGGCCGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PLADELFDAPGVPADGGSNSYSS*TGAVAF
Trigger: GAAGGCCACGGCCCCCGTCAAGGACGAGTATGAGTT...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp TTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCAAAGTCGCCGTCGGACTaGTCCTTGAAGCCACTCTCG +
Preference number: 5 (lower is better)
Translates to: LMRRASPRMAARCRRVSPKSPSD*SLKPLS
Trigger: CGAGAGTGGCTTCAAGGACAAGTCCGACGGCGACTT...TGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGCCCTCGTCCCTGGACTaGTCTTTGAGCACGCGGGGC +
Preference number: 5 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQPSSLD*SLSTRG
Trigger: GCCCCGCGTGCTCAAAGACAAGTCCAGGGACGAGGG...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp AGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGGCGTCCACTCCGTCCTaGACGTCCTCCAGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: SAVQPAKSLTLTSAPSLMASTPS*TSSSPG
Trigger: GCCGGGGCTGGAGGACGTCAAGGACGGAGTGGACGC...CATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS GCA 90 bp GAGGGCTCGGTGGGCAGAGCTGTCTTGGGGCCGGGACATGGCAGGTaGCTTCCCACTCCTTGCTGCACCCACAGCCCTTACAGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: EGSVGRAVLGPGHGR*LPTPCCTHSPYRGL
Trigger: CAGGCCTCTGTAAGGGCTGTGGGTGCAGCAAGGAGTGGGAAGGCACCTGCCATGTCCCGGCCCCAAGACAGCTCTGCCCACCGAGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS-3UTR CAA 90 bp CAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCATCCTTCTGCTCCCCATaGGCGCCCGCGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: QPAAASRRRSSPGYRPRASFCSP*APAVKG
Trigger: GCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGA...TGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp GGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGCCCAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: GHLLALGEGVAGSDSRQPRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...GGGCTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CAA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CAA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: RRAPADVAPCDPSALLSCAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCCAGCCTGCGAAGTCCTaGACGTTGACGTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: RRAPADVAPCDPSALLSCQPAKS*TLTSAP
Trigger: GGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTG...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCGTGGGCACAGCTCGGCCTaGAGGGTGGGCAAGGCGAAA +
Preference number: 5 (lower is better)
Translates to: QLLRDVVVAPVTGLVQRRGHSSA*RVGKAK
Trigger: TTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCC...ACGGCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CAA 90 bp CACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGGGCACAGCTCGGCCTaGAGGGTGGGCAAGGCGAAA +
Preference number: 5 (lower is better)
Translates to: HDGHQQMWPRVTPQPCCPGHSSA*RVGKAK
Trigger: TTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCC...AGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS GCA 90 bp CTTCCCTCCTGTCTCTGGAGGCAGCGCCCTGAGGATGTGCTACAGTaGGGGGACAAGCCAGGTGGGGAGCTGCCCTGTAGTGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LPSCLWRQRPEDVLQ*GDKPGGELPCSEGC
Trigger: GCAGCCCTCACTACAGGGCAGCTCCCCACCTGGCTTGTCCCCGCACTGTAGCACATCCTCAGGGCGCTGCCTCCAGAGACAGGAGGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568100.2
CDS-3UTR CAA 90 bp CAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCGTCAGCCTGCGAAGTCCTaGACGTTGACGTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: QLLRDVVVAPVTGLVQRRQPAKS*TLTSAP
Trigger: GGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTG...ACGGCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGTCGTCATCTAGGCCCTaGGTGTTCACCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: ADELFDAPGVPADGGSVQSSSRP*VFTSAP
Trigger: AGGTGCGGAGGTGAACACCAAGGGCCTAGATGACGA...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp GCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACTCGTCATCTAGGCCCTaGGTGTTCACCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: AASPGSTPAFRQDGAVRHSSSRP*VFTSAP
Trigger: AGGTGCGGAGGTGAACACCAAGGGCCTAGATGACGA...GTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp GACGGAGGTCCCCAGTCCCAGCTGCTTAGGGGCCACCACACTCCTCGGCCCTCCTCGTCATCTAGGCCCTaGGTGTTCACCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: DGGPQSQLLRGHHTPRPSSSSRP*VFTSAP
Trigger: AGGTGCGGAGGTGAACACCAAGGGCCTAGATGACGA...GGAGGGCCGAGGAGTGTGGTGGCCCCTAAGCAGCTGGGACTGGGGACCTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCGTACCATCGTGGGGGAGTaGGCCACTTTCAGCGGCGTC +
Preference number: 5 (lower is better)
Translates to: QLLRDVVVAPVTGLVQRRTIVGE*ATFSGV
Trigger: GACGCCGCTGAAAGTGGCCAACTCCCCCACGATGGT...ACGGCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp CTTCCCAAAGTCGCCGTCGGACTTGTCCTTGAAGCCACTCTCGCAGCCACACTCCGGGGCGGGCTGTCCTaGTCCCTGGTGGCGGGCTTC +
Preference number: 5 (lower is better)
Translates to: LPKVAVGLVLEATLAATLRGGLS*SLVAGF
Trigger: GAAGCCCGCCACCAGGGACAAGGACAGCCCGCCCCG...GAGTGTGGCTGCGAGAGTGGCTTCAAGGACAAGTCCGACGGCGACTTTGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS GCA 90 bp AGAGCTGTCTTGGGGCCGGGACATGGCAGGTGCCTTCCCACTCCTTaGTGCACCCACAGCCCTTACAGAGGCCTGGTCCTAGGACGGGCT +
Preference number: 5 (lower is better)
Translates to: RAVLGPGHGRCLPTP*CTHSPYRGLVLGRA
Trigger: AGCCCGTCCTAGGACCAGGCCTCTGTAAGGGCTGTGGGTGCAGCAAGGAGTGGGAAGGCACCTGCCATGTCCCGGCCCCAAGACAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS GCA 90 bp CAGCTCATGTTTTCAAGGAAGGGTCTCCAACTGAGCAGTCACCAGTaGAGCCTGCGTCAGGGCGCGCCTCCCTCCAGCGGTCCCCGCGTC +
Preference number: 5 (lower is better)
Translates to: QLMFSRKGLQLSSHQ*SLRQGAPPSSGPRV
Trigger: GACGCGGGGACCGCTGGAGGGAGGCGCGCCCTGACGCAGGCTGCACTGGTGACTGCTCAGTTGGAGACCCTTCCTTGAAAACATGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646838.1
CDS CCA 90 bp CACGAAGGCTCTCCCCTCCCGCCAACAGTGAGCTCCTCAGCAGAGTaGTGCCGGAGTGGTCGTGGAGGGCTCAGGCAAGAGGTTAGGGAG +
Preference number: 5 (lower is better)
Translates to: HEGSPLPPTVSSSAE*CRSGRGGLRQEVRE
Trigger: CTCCCTAACCTCTTGCCTGAGCCCTCCACGACCACTCCGGCACCACTCTGCTGAGGAGCTCACTGTTGGCGGGAGGGGAGAGCCTTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS-3UTR CAA 90 bp TCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: SPRMAARCRRVSPRSFLLRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...CAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: RRAPADVAPCDPSALLSCRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp TGGTGCAGCCAAAGGGACACGCACAAGCCGTCAGGTCAGCGCGGCATCAGGATGTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: WCSQRDTHKPSGQRGIRMSLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...CATCCTGATGCCGCGCTGACCTGACGGCTTGTGCGTGTCCCTTTGGCTGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR CAA 90 bp CTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LQPAAASRRRSSPGYRPRAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...ACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp GACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTGGCAGCCTGCGAAGTCCTaGACGTTGACGTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: DLSRPPQRLRPLSAHCSWQPAKS*TLTSAP
Trigger: GGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTG...CCAGGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGTCCGAGGAGCAGAACTaGTCGCTCCGCTTTCCGAAG +
Preference number: 5 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQSEEQN*SLRFPK
Trigger: CTTCGGAAAGCGGAGCGACAAGTTCTGCTCCTCGGA...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp CAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCAGCGCCGTCCGTCGGACTTGTCCTaGAAGCCACTCTCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: QLLRDVVVAPVTGLVQRRPSDLS*KPLSQP
Trigger: TGGCTGCGAGAGTGGCTTCAAGGACAAGTCCGACGG...ACGGCGCTGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp GCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCTCTCAGGGTGCTGCTaGTCAGAAGACTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: APSLMSSLMRRASPRMAALSGCC*SEDFLC
Trigger: ACACAGGAAGTCTTCTGACAAGCAGCACCCTGAGAG...AGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp TTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCTGTTTGCTTTTAGCCTaGTCTTCGGCAGCGTGCTTC +
Preference number: 5 (lower is better)
Translates to: FDAPGVPADGGSVQAGLSCLLLA*SSAACF
Trigger: GAAGCACGCTGCCGAAGACAAGGCTAAAAGCAAACA...GGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS TCA 90 bp GCAGAGCCAGCCGAGGGCCGAGGAACCGTTACTCAGCCGTGTCAGTaGCTTCTACCAGGGGCTGCACGGCACTCAGGAGTCAGGCCAACA +
Preference number: 5 (lower is better)
Translates to: AEPAEGRGTVTQPCQ*LLPGAARHSGVRPT
Trigger: TGTTGGCCTGACTCCTGAGTGCCGTGCAGCCCCTGGTAGAAGTCACTGACACGGCTGAGTAACGGTTCCTCGGCCCTCGGCTGGCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS TCA 90 bp TCTGCAGGCAGCACTGAGGCCCATCCTGCTGGGAGAATGCCGCTCTaGGGGCAGTGGGACTGCCAGCAAAGGACACAGGCTCAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: SAGSTEAHPAGRMPL*GQWDCQQRTQAQGD
Trigger: GTCTCCCTGAGCCTGTGTCCTTTGCTGGCAGTCCCACTGCCCTCAGAGCGGCATTCTCCCAGCAGGATGGGCCTCAGTGCTGCCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568512.6
ENST00000644139.1
CDS GCA 90 bp CAGAAGGCTCTGCAGGCAGCACTGAGGCCCATCCTGCTGGGAGAATaGCGCTCTGAGGGCAGTGGGACTGCCAGCAAAGGACACAGGCTC +
Preference number: 5 (lower is better)
Translates to: QKALQAALRPILLGE*RSEGSGTASKGHRL
Trigger: GAGCCTGTGTCCTTTGCTGGCAGTCCCACTGCCCTCAGAGCGGCATTCTCCCAGCAGGATGGGCCTCAGTGCTGCCTGCAGAGCCTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568512.6
ENST00000644139.1
CDS GCA 90 bp GAAGGCTCTCCCCTCCCGCCAACAGTGAGCTCCTCAGCAGAGTGGTaGCGGAGTGGTCGTGGAGGGCTCAGGCAAGAGGTTAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: EGSPLPPTVSSSAEW*RSGRGGLRQEVREK
Trigger: CTTCTCCCTAACCTCTTGCCTGAGCCCTCCACGACCACTCCGGCACCACTCTGCTGAGGAGCTCACTGTTGGCGGGAGGGGAGAGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS GCA 90 bp GGGGAGTTGGCCACTTTCAGCGGCGTCTCGCCTTTCCTGTTGCTCTaGTGCGGGTTCCCTCCGTACCGCAGCAGCAGCTTCACCACCTAC +
Preference number: 5 (lower is better)
Translates to: GELATFSGVSPFLLL*CGFPPYRSSSFTTY
Trigger: GTAGGTGGTGAAGCTGCTGCTGCGGTACGGAGGGAACCCGCAGCAGAGCAACAGGAAAGGCGAGACGCCGCTGAAAGTGGCCAACTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS CCA 90 bp TGGCACGGACCAGCTGGAGGAAGGACCTCGGGTCTGCAGAACAGCTaGGCAGCTTCCGGCTTTTGCCTCCACAGCAGAAGTGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: WHGPAGGRTSGLQNS*AASGFCLHSRSGAV
Trigger: CACAGCCCCACTTCTGCTGTGGAGGCAAAAGCCGGAAGCTGCCCAGCTGTTCTGCAGACCCGAGGTCCTTCCTCCAGCTGGTCCGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS-3UTR CAA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGTCCTTCTGCTCCCCATaGGCGCCCGCGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: EVLDVDVCPLADELFDAPSFCSP*APAVKG
Trigger: GCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGA...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp GAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCAGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: EDISETRRISRQHPCFPAAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...TGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp GAGCACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTTCGTCATCTAGGCCCTaGGTGTTCACCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: EHDGHQQMWPRVTPQPCCSSSRP*VFTSAP
Trigger: AGGTGCGGAGGTGAACACCAAGGGCCTAGATGACGA...ACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGTCGGAGTCCGTGTTGTaGCCGTCGACTGAACTGGAA +
Preference number: 5 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQSESVL*PSTELE
Trigger: TTCCAGTTCAGTCGACGGCAACAACACGGACTCCGA...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp CCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGAAGACTTTCTCTTTTTaGTCTCTCCCCGCGTCGGCA +
Preference number: 5 (lower is better)
Translates to: PLADELFDAPGVPADGGSKTFSF*SLPASA
Trigger: TGCCGACGCGGGGAGAGACAAAAAAGAGAAAGTCTT...CGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp CTTCCCAAAGTCGCCGTCGGACTTGTCCTTGAAGCCACTCTCGCAGCCACACTCGCGCTCTCCCTCGGCTaGTCGTCTCCAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: LPKVAVGLVLEATLAATLALSLG*SSPGGS
Trigger: GGAGCCACCTGGAGACGACAAGCCGAGGGAGAGCGC...GAGTGTGGCTGCGAGAGTGGCTTCAAGGACAAGTCCGACGGCGACTTTGGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp AGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGTCGGCCTTCTCTTTCTaGGCTCGCTCTCGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: SAVQPAKSLTLTSAPSLMSAFSF*ARSRSW
Trigger: CCACGACCGAGAGCGAGCCAAGAAAGAGAAGGCCGA...CATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS TCA 90 bp CAGCAGAGGAACATCCGCATCACCAGAAGGCTCTGCAGGCAGCACTaGGGCCCATCCTGCTGGGAGAATGCCGCTCTGAGGGCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: QQRNIRITRRLCRQH*GPSCWENAALRAVG
Trigger: TCCCACTGCCCTCAGAGCGGCATTCTCCCAGCAGGATGGGCCTCAGTGCTGCCTGCAGAGCCTTCTGGTGATGCGGATGTTCCTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568512.6
ENST00000644139.1
CDS TCA 90 bp CTTCCCAGGAATCTTCTCACGAAGGCTCTCCCCTCCCGCCAACAGTaGGCTCCTCAGCAGAGTGGTGCCGGAGTGGTCGTGGAGGGCTCA +
Preference number: 5 (lower is better)
Translates to: LPRNLLTKALPSRQQ*APQQSGAGVVVEGS
Trigger: TGAGCCCTCCACGACCACTCCGGCACCACTCTGCTGAGGAGCTCACTGTTGGCGGGAGGGGAGAGCCTTCGTGAGAAGATTCCTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS-3UTR CAA 90 bp AAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACTCCTTCTGCTCCCCATaGGCGCCCGCGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: KHLTLKEPACAWQHCREHSFCSP*APAVKG
Trigger: GCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGA...GTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563291.1
ENST00000567736.6
ENST00000647238.1
CDS-3UTR CAA 90 bp GCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAATCTTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: ALRAHGAALGLQDDLGQSSLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...AGATTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp ATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: MKTSVRPAASPGSTPAFRAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...CCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CACGACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCTCGTCATCTAGGCCCTaGGTGTTCACCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: HDLSRPPQRLRPLSAHCSSSSRP*VFTSAP
Trigger: AGGTGCGGAGGTGAACACCAAGGGCCTAGATGACGA...GGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGTTTTTCAATAGGTGCTaGTCGTCCACCGGAGGAACC +
Preference number: 5 (lower is better)
Translates to: ADELFDAPGVPADGGSVQFFNRC*SSTGGT
Trigger: GGTTCCTCCGGTGGACGACAAGCACCTATTGAAAAA...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp CGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTCCGTCCCTGCGCTCCTaGCAGCTCTCCAGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: RLGAGGSLHARFSCSLYLPSLRS*QLSRAS
Trigger: GGACGCCCTGGAGAGCTGCAAGGAGCGCAGGGACGG...AAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp CTTCCCAAAGTCGCCGTCGGACTTGTCCTTGAAGCCACTCTCGCAGCCACACTCGCCTTCTCCTTGAGCTaGGGGTCTCCGGACCGGTGC +
Preference number: 5 (lower is better)
Translates to: LPKVAVGLVLEATLAATLAFSLS*GSPDRC
Trigger: GCACCGGTCCGGAGACCCCAAGCTCAAGGAGAAGGC...GAGTGTGGCTGCGAGAGTGGCTTCAAGGACAAGTCCGACGGCGACTTTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp CAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGCAAGATGACCTAGGACAAGGGCACAGCTCGGCCTaGAGGGTGGGCAAGGCGAAA +
Preference number: 5 (lower is better)
Translates to: QALRAHGAALGLQDDLGQGHSSA*RVGKAK
Trigger: TTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCC...TTGTCCTAGGTCATCTTGCAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CCCTGCTTTCCGGCAGGACGGGGCTGTCAGGCACACCACGACCTCTCTCGACCCCACTGGCCACACCTCTaGGTGTTACCTCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: PCFPAGRGCQAHHDLSRPHWPHL*VLPHSR
Trigger: TCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTG...GGGTCGAGAGAGGTCGTGGTGTGCCTGACAGCCCCGTCCTGCCGGAAAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CTCAGCAGGAAAGGCTCTCAAGCTTTAAGGGCCCATGGGGCTGCCCTGGGCCTGTGTGACCCCTCAGCCTaGCTGTCCTGCCTGCAACCA +
Preference number: 5 (lower is better)
Translates to: LSRKGSQALRAHGAALGLCDPSA*LSCLQP
Trigger: TGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCACA...CAGGCCCAGGGCAGCCCCATGGGCCCTTAAAGCTTGAGAGCCTTTCCTGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CCACTGGTCCACGGCACACTGCAGTGCACATGCCCTTCCTGGCCAGAGGCTCCCGGGTCTGCTACACGCTaGGTGAGAAACTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: PLVHGTLQCTCPSWPEAPGSATR*VRNCIR
Trigger: CCTGATGCAGTTTCTCACCAAGCGTGTAGCAGACCC...GGGAGCCTCTGGCCAGGAAGGGCATGTGCACTGCAGTGTGCCGTGGACCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS TCA 90 bp CAAGCGAGACGGCTGCATCAACCACACAGTCCGCTAGGCACAGTGTaGGTGGAGTCGCGTGGTCTGGGAGGAGACTCCAGGGAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: QARRLHQPHSPLGTV*VESRGLGGDSREEP
Trigger: TGGCTCTTCCCTGGAGTCTCCTCCCAGACCACGCGACTCCACTCACACTGTGCCTAGCGGACTGTGTGGTTGATGCAGCCGTCTCGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 90 bp CCAGTCTGCTTCTCCACCATGTCGCTGCTGAGGGGAAGCTCTTCCTaGTGTGGTGCTTTAGGGCACCCACCCTTGGGCATCGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: PVCFSTMSLLRGSSS*CGALGHPPLGIVLL
Trigger: GAGCAGGACGATGCCCAAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAGCTTCCCCTCAGCAGCGACATGGTGGAGAAGCAGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000301030.10
ENST00000330736.10
ENST00000378330.7
ENST00000378332.7
ENST00000562275.6
ENST00000562816.5
ENST00000563291.1
ENST00000566858.5
ENST00000567699.2
ENST00000567736.6
ENST00000613312.4
ENST00000642333.1
ENST00000642443.1
ENST00000642600.1
ENST00000642695.1
ENST00000643147.1
ENST00000643964.1
ENST00000644045.1
ENST00000644784.1
ENST00000645278.1
ENST00000645844.1
ENST00000646838.1
ENST00000646975.1
ENST00000647238.1
CDS GCA 90 bp GGAAGGACCTCGGGTCTGCAGAACAGCTGGGCAGCTTCCGGCTTTTaGCTCCACAGCAGAAGTGGGGCTGTGTCTCCTCAGGTGGCAGAA +
Preference number: 5 (lower is better)
Translates to: GRTSGLQNSWAASGF*LHSRSGAVSPQVAE
Trigger: TTCTGCCACCTGAGGAGACACAGCCCCACTTCTGCTGTGGAGGCAAAAGCCGGAAGCTGCCCAGCTGTTCTGCAGACCCGAGGTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 90 bp TGTGGAGGGCCCCTGGCTGTACCTCACGCCACCTGCGAGTTTCAGTaGCCAGGAATCCCCAGAAGGAAATGGCCATTGGTGACGGCAAGC +
Preference number: 5 (lower is better)
Translates to: CGGPLAVPHATCEFQ*PGIPRRKWPLVTAS
Trigger: GCTTGCCGTCACCAATGGCCATTTCCTTCTGGGGATTCCTGGGCACTGAAACTCGCAGGTGGCGTGAGGTACAGCCAGGGGCCCTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 90 bp AGAGCCAACGCGTGTGGAGGGCCCCTGGCTGTACCTCACGCCACCTaGGAGTTTCAGTGCCCAGGAATCCCCAGAAGGAAATGGCCATTG +
Preference number: 5 (lower is better)
Translates to: RANACGGPLAVPHAT*EFQCPGIPRRKWPL
Trigger: CAATGGCCATTTCCTTCTGGGGATTCCTGGGCACTGAAACTCGCAGGTGGCGTGAGGTACAGCCAGGGGCCCTCCACACGCGTTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 90 bp GAGTTGGCCACTTTCAGCGGCGTCTCGCCTTTCCTGTTGCTCTGCTaGGGGTTCCCTCCGTACCGCAGCAGCAGCTTCACCACCTACAAG +
Preference number: 5 (lower is better)
Translates to: ELATFSGVSPFLLLC*GFPPYRSSSFTTYK
Trigger: CTTGTAGGTGGTGAAGCTGCTGCTGCGGTACGGAGGGAACCCGCAGCAGAGCAACAGGAAAGGCGAGACGCCGCTGAAAGTGGCCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS CCA 90 bp TATGTCTGCATCAGCTCTGCGTTGTTCACCGACAAATCCCGTGTCTaGAAGAGTCCTGGCAGGCTGCACGGGCGTGCTCCGAGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: YVCISSALFTDKSRV*KSPGRLHGRAPRAA
Trigger: CGCAGCCCTCGGAGCACGCCCGTGCAGCCTGCCAGGACTCTTCCAGACACGGGATTTGTCGGTGAACAACGCAGAGCTGATGCAGACATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378330.7
ENST00000646166.1
CDS CCA 90 bp GCATCAACCACACAGTCCGCTAGGCACAGTGTGAGTGGAGTCGCGTaGTCTGGGAGGAGACTCCAGGGAAGAGCCAGAACGCCACACGCT +
Preference number: 5 (lower is better)
Translates to: ASTTQSARHSVSGVA*SGRRLQGRARTPHA
Trigger: AGCGTGTGGCGTTCTGGCTCTTCCCTGGAGTCTCCTCCCAGACCACGCGACTCCACTCACACTGTGCCTAGCGGACTGTGTGGTTGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CCA 90 bp GGTGACACCGCACTGATGAGCCAGTTCACTGGAGGACTGCTGGGGTaGTGCGGCAAGACTGTTTCAACGCACTACGTCCCGAGCACGCAG +
Preference number: 5 (lower is better)
Translates to: GDTALMSQFTGGLLG*CGKTVSTHYVPSTQ
Trigger: CTGCGTGCTCGGGACGTAGTGCGTTGAAACAGTCTTGCCGCACCACCCCAGCAGTCCTCCAGTGAACTGGCTCATCAGTGCGGTGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CCA 90 bp TCCTGCTGGTTCTTCCCGAGGCAGCTCAGCGGTTCTGGGATTCCGTaGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SCWFFPRQLSGSGIP*SAMVRDRLQKGPFL
Trigger: GAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATCCCAGAACCGCTGAGCTGCCTCGGGAAGAACCAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647539.1
CDS-3UTR CAA 90 bp CGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: RASPRMAARCRRVSPRSFPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...AAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCATCCGCGGGGACGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: EVLDVDVCPLADELFDAPAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp CCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGTGCTGCCTGAAGAGCTaGTCTCCGACGCTGAATTCT +
Preference number: 5 (lower is better)
Translates to: PHLQPAAASRRRSSPGYRCCLKS*SPTLNS
Trigger: AGAATTCAGCGTCGGAGACAAGCTCTTCAGGCAGCA...CCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp GTCAAGGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTGCTGTGTGACCCCTCAGCCTaGCTGTCCTGCCTGCAACCA +
Preference number: 5 (lower is better)
Translates to: VKVLAGQDPSFPPSWGLLCDPSA*LSCLQP
Trigger: TGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCACA...CAGCAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACCTTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCACCACACACGTGAGTGCCTaGGGACCCTCGTCAACACAC +
Preference number: 5 (lower is better)
Translates to: LKEPACAWQHCREHTPGTTHVSA*GPSSTH
Trigger: GTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGT...GGTGCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS TCA 90 bp CCGTTCATCAGTGGTCCCCGTTTACGGACCCCGGAAGCTCCCGGGTaGCCCAGTCCACCTCAGAGAGTATCACCCACAGAATGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: PFISGPRLRTPEAPG*PSPPQRVSPTECKL
Trigger: CAGCTTGCATTCTGTGGGTGATACTCTCTGAGGTGGACTGGGTCACCCGGGAGCTTCCGGGGTCCGTAAACGGGGACCACTGATGAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566973.1
CDS GCA 90 bp GACACCGCACTGATGAGCCAGTTCACTGGAGGACTGCTGGGGTGGTaGGGCAAGACTGTTTCAACGCACTACGTCCCGAGCACGCAGCAT +
Preference number: 5 (lower is better)
Translates to: DTALMSQFTGGLLGW*GKTVSTHYVPSTQH
Trigger: ATGCTGCGTGCTCGGGACGTAGTGCGTTGAAACAGTCTTGCCGCACCACCCCAGCAGTCCTCCAGTGAACTGGCTCATCAGTGCGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CCA 90 bp GCAGAACAGCTGGGCAGCTTCCGGCTTTTGCCTCCACAGCAGAAGTaGGGCTGTGTCTCCTCAGGTGGCAGAAGGTCGAGAGAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: AEQLGSFRLLPPQQK*GCVSSGGRRSREVK
Trigger: CTTGACCTCTCTCGACCTTCTGCCACCTGAGGAGACACAGCCCCACTTCTGCTGTGGAGGCAAAAGCCGGAAGCTGCCCAGCTGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS-3UTR CAA 90 bp AGTGCCCACTGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: SAHCSWAGHNGHFLKLESAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...AGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp AGCGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGTCTGGGTTCTTGGCCTaGTGCTTGAGGCCTTTTTCG +
Preference number: 5 (lower is better)
Translates to: SAVQPAKSLTLTSAPSLMSGFLA*CLRPFS
Trigger: CGAAAAAGGCCTCAAGCACAAGGCCAAGAACCCAGA...CATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp AGCGGATACGAGCCTTTCATAGATGGCACTTGCTGGGAAACCTGTGAGAGGCCGGGGCACAGCTCGGCCTaGAGGGTGGGCAAGGCGAAA +
Preference number: 5 (lower is better)
Translates to: SGYEPFIDGTCWETCERPGHSSA*RVGKAK
Trigger: TTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCC...CGGCCTCTCACAGGTTTCCCAGCAAGTGCCATCTATGAAAGGCTCGTATCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCACACTGGCCACACCTCTaGGTGTTACCTCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: QPAAASRRRSSPGYRPRAHWPHL*VLPHSR
Trigger: TCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTG...TGCACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CAA 90 bp CACGACCTCTCTCGACCCCCACAGAGGCTGAGACCTCTCAGTGCCCACTGCTCCCACTGGCCACACCTCTaGGTGTTACCTCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: HDLSRPPQRLRPLSAHCSHWPHL*VLPHSR
Trigger: TCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTG...GGAGCAGTGGGCACTGAGAGGTCTCAGCCTCTGTGGGGGTCGAGAGAGGTCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS GCA 90 bp TTTGTCCAATCTTCAAGAGCCCAGGCCACCATCACGAGGTCCCTTTaGACAGGGCTTGTCCTCAGCACAGCCATGAGGCTGCGACCAGGC +
Preference number: 5 (lower is better)
Translates to: FVQSSRAQATITRSL*TGLVLSTAMRLRPG
Trigger: GCCTGGTCGCAGCCTCATGGCTGTGCTGAGGACAAGCCCTGTGCAAAGGGACCTCGTGATGGTGGCCTGGGCTCTTGAAGATTGGACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646345.1
CDS GCA 90 bp TGCAGGCCAAGGAGGGGACAGATGGGCATTACTGTGGGGTGGTCCTaGTTTGTCCAATCTTCAAGAGCCCAGGCCACCATCACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: CRPRRGQMGITVGWS*FVQSSRAQATITRS
Trigger: GGACCTCGTGATGGTGGCCTGGGCTCTTGAAGATTGGACAAAGCAGGACCACCCCACAGTAATGCCCATCTGTCCCCTCCTTGGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646345.1
CDS CCA 90 bp TTCGAGGAGCGTACCAGCCTTGCAGCACCACAACAGGGACTGGGCTaGAGGCATCTGAAGGCATCAACACAGAGCACTGTGTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: FEERTSLAAPQQGLG*RHLKASTQSTVSES
Trigger: GGACTCGGACACAGTGCTCTGTGTTGATGCCTTCAGATGCCTCCAGCCCAGTCCCTGTTGTGGTGCTGCAAGGCTGGTACGCTCCTCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645278.1
ENST00000645844.1
CDS-3UTR CAA 90 bp TTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCAATCCTTCTGCTCCCCATaGGCGCCCGCGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: FTHLSPLALGKVWHSEFQSFCSP*APAVKG
Trigger: GCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGA...TTGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567736.6
ENST00000647238.1
CDS-3UTR CAA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCCTTTATCTTTGGTTTTaGAGGCAGAGTTGGGCGTTC +
Preference number: 5 (lower is better)
Translates to: RRAPADVAPCDPSALLSCLYLWF*RQSWAF
Trigger: GAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAG...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACTGTGGGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: PTGTSRFSSELFKAKALWAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...CCACAGTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGTCGTCATCTAGGCCCTaGGTGTTCACCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: EVLDVDVCPLADELFDAPSSSRP*VFTSAP
Trigger: AGGTGCGGAGGTGAACACCAAGGGCCTAGATGACGA...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp TGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGTTCTTGGCCTTGTGCTaGAGGCCTTTTTCGAACTCG +
Preference number: 5 (lower is better)
Translates to: CSQQLLRDVVVAPVTGLVFLALC*RPFSNS
Trigger: CGAGTTCGAAAAAGGCCTCAAGCACAAGGCCAAGAA...CACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp GCTGATGAGCTCTTTGATGCGCCGGGCGTCCCCGCGGATGGCGGCTCGGTGCAGGATGGGACGCTTTCTTaGGTGCAATCGTGTTATTTT +
Preference number: 5 (lower is better)
Translates to: ADELFDAPGVPADGGSVQDGTLS*VQSCYF
Trigger: AAAATAACACGATTGCACCAAAGAAAGCGTCCCATC...CTGCACCGAGCCGCCATCCGCGGGGACGCCCGGCGCATCAAAGAGCTCATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGGGCACAGCTCGGCCTaGAGGGTGGGCAAGGCGAAA +
Preference number: 5 (lower is better)
Translates to: LWFCALATPLGVTSFQTRGHSSA*RVGKAK
Trigger: TTTCGCCTTGCCCACCCTCAAGGCCGAGCTGTGCCC...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp TTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCACATCATGGAACCGTGTGACCCCTCAGCCTaGCTGTCCTGCCTGCAACCA +
Preference number: 5 (lower is better)
Translates to: LRVGKAKTRFPVPHIMEPCDPSA*LSCLQP
Trigger: TGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCACA...CGGTTCCATGATGTGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp TGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCTGACTCATGGGTGTaGTCTGAGGGTGGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: CQAPNAEGTSMCLAALQRADSWV*SEGGGC
Trigger: ACAGCCCCCACCCTCAGACAACACCCATGAGTCAGC...TCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CAA 90 bp ACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACACCCCAGGCTTCAACTTCACACACTaGTCGCCTCTAGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: TLKEPACAWQHCREHTPGFNFTH*SPLALG
Trigger: GCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAA...GCCTGGGGTGTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CAA 90 bp ACTGAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACGCTTCCCGCCGTGTGTaGCTAACATCCCCACACACG +
Preference number: 5 (lower is better)
Translates to: TEGAKHLTLKEPACAWQHASRRV*LTSPHT
Trigger: CGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGC...GTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS CCA 90 bp CAGCTTCACCACCTACAAGACAGTAACACCCGCGTCAGGGACTGCTaGAGAAGCACAACTCCTCTACCGTTCCGCATAACACGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: QLHHLQDSNTRVRDC*RSTTPLPFRITRQP
Trigger: GGGCTGCCGTGTTATGCGGAACGGTAGAGGAGTTGTGCTTCTCCAGCAGTCCCTGACGCGGGTGTTACTGTCTTGTAGGTGGTGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS CCA 90 bp GTTGTGTCCACTGCAGGCCAAGGAGGGGACAGATGGGCATTACTGTaGGGTGGTCCTGCTTTGTCCAATCTTCAAGAGCCCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: VVSTAGQGGDRWALL*GGPALSNLQEPRPP
Trigger: TGGTGGCCTGGGCTCTTGAAGATTGGACAAAGCAGGACCACCCCACAGTAATGCCCATCTGTCCCCTCCTTGGCCTGCAGTGGACACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646345.1
CDS-3UTR CAA 90 bp GTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: VLCTGHTSWCYLIPDEGGRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...CCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp CACCTCCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTCTTTATCTTTGGTTTTaGAGGCAGAGTTGGGCGTTC +
Preference number: 5 (lower is better)
Translates to: HLRTCSQQLLRDVVVAPVLYLWF*RQSWAF
Trigger: GAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAG...AACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp CGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTTTATCTTTGGTTTTaGAGGCAGAGTTGGGCGTTC +
Preference number: 5 (lower is better)
Translates to: RTCSQQLLRDVVVAPVTGLYLWF*RQSWAF
Trigger: GAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAG...GCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDSLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp TGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGCAGCCTGCGAAGTCCTaGACGTTGACGTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: CSWAGHNGHFLKLESMVLQPAKS*TLTSAP
Trigger: GGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTG...CAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp GCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTTTTCCTTCTGCTGCTaGGCATTAGAAGGCTCTCGT +
Preference number: 5 (lower is better)
Translates to: AVQPAKSLTLTSAPSLMSFSFCC*ALEGSR
Trigger: ACGAGAGCCTTCTAATGCCAAGCAGCAGAAGGAAAA...GCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp AAGGGCCACCTGCTGGCGCTCGGAGAGGGGGTAGCCGGCTCGGATTCCAGACAGGACTCTTTGAGCTTTTaGTCTTTAAATGGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: KGHLLALGEGVAGSDSRQDSLSF*SLNGGS
Trigger: GGACCCTCCATTTAAAGACAAAAAGCTCAAAGAGTC...CTGTCTGGAATCCGAGCCGGCTACCCCCTCTCCGAGCGCCAGCAGGTGGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp CGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTGCGTTTACTATAGACTCTaGTCGCCCACAGAATCAGTT +
Preference number: 5 (lower is better)
Translates to: RRAPADVAPCDPSALLSCVYYRL*SPTESV
Trigger: AACTGATTCTGTGGGCGACAAGAGTCTATAGTAAAC...GCAGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp ATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCACTGGCCACACCTCTaGGTGTTACCTCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: MKTSVRPAASPGSTPAFRHWPHL*VLPHSR
Trigger: TCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTG...CCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CTCCACGGAGCTCTGATGAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCCACTGGCCACACCTCTaGGTGTTACCTCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: LHGALMKTSVRPAASPGSHWPHL*VLPHSR
Trigger: TCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTG...GCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp TTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGTTGTGACCCCTCAGCCTaGCTGTCCTGCCTGCAACCA +
Preference number: 5 (lower is better)
Translates to: FCALATPLGVTSFQTRVGCDPSA*LSCLQP
Trigger: TGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCACA...ACCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp AGCAGGACCCCGGCGGTCCTTTGGATCAGAACACACTCAACGATGCAGACACCTGACCCCGGCGGTCCTTaGGATCAGAACACACTCAAC +
Preference number: 5 (lower is better)
Translates to: SRTPAVLWIRTHSTMQTPDPGGP*DQNTLN
Trigger: GTTGAGTGTGTTCTGATCCAAAGGACCGCCGGGGTC...AGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGGACCGCCGGGGTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS TCA 90 bp TTACAGATGAGTCACAGCTCATGTTTTCAAGGAAGGGTCTCCAACTaGGCAGTCACCAGTGCAGCCTGCGTCAGGGCGCGCCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LQMSHSSCFQGRVSN*AVTSAACVRARLPP
Trigger: TGGAGGGAGGCGCGCCCTGACGCAGGCTGCACTGGTGACTGCTCAGTTGGAGACCCTTCCTTGAAAACATGAGCTGTGACTCATCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646838.1
CDS GCA 90 bp CCACCTCAGAGAGTATCACCCACAGAATGCAAGCTGACTGGTGTGTaGCTGCCTACCTACATACACCCCGAGGAAGGCACAGCACCCACA +
Preference number: 5 (lower is better)
Translates to: PPQRVSPTECKLTGV*LPTYIHPEEGTAPT
Trigger: TGTGGGTGCTGTGCCTTCCTCGGGGTGTATGTAGGTAGGCAGGCACACACCAGTCAGCTTGCATTCTGTGGGTGATACTCTCTGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566973.1
CDS GCA 90 bp CAGCAGCTTCACCACCTACAAGACAGTAACACCCGCGTCAGGGACTaGTGGAGAAGCACAACTCCTCTACCGTTCCGCATAACACGGCAG +
Preference number: 5 (lower is better)
Translates to: QQLHHLQDSNTRVRD*WRSTTPLPFRITRQ
Trigger: CTGCCGTGTTATGCGGAACGGTAGAGGAGTTGTGCTTCTCCAGCAGTCCCTGACGCGGGTGTTACTGTCTTGTAGGTGGTGAAGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS CCA 90 bp AAACTCATACTCGTCCTTGACGGGGGCCGTGGCCTTCTGTGGCTCTaGGTTCTTGGCCTTGTGCTTGAGCCTTTTTCGAACTCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: KLILVLDGGRGLLWL*VLGLVLEPFSNSES
Trigger: GGACTCCGAGTTCGAAAAAGGCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCACGGCCCCCGTCAAGGACGAGTATGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS-3UTR CAA 90 bp TTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGGTGGGTAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: FCALATPLGVTSFQTRVGRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...ACCCACCCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp CGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTTTATCTTTGGTTTTaGAGGCAGAGTTGGGCGTTC +
Preference number: 5 (lower is better)
Translates to: RRPACEVLDVDVCPLADELYLWF*RQSWAF
Trigger: GAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAG...CTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330736.10
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
ENST00000645278.1
CDS-3UTR CAA 90 bp CACGACGGGCACCAGCAGATGTGGCCCCGTGTGACCCCTCAGCCTTGCTGTCCTCCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: HDGHQQMWPRVTPQPCCPPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...AGGACAGCAAGGCTGAGGGGTCACACGGGGCCACATCTGCTGGTGCCCGTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: HNGHFLKLESMVLCTGHTSLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...GGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACCAGCCTGCGAAGTCCTaGACGTTGACGTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDQPAKS*TLTSAP
Trigger: GGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTG...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp GAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGAGTAGTCAGACTCGCTaGTCAGTCTCGTCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: EVLDVDVCPLADELFDAPSSQTR*SVSSLW
Trigger: CCACAAGGACGAGACTGACAAGCGAGTCTGACTACT...CGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp ATGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTAGTCTCCAAGATGAGCTaGGCCACAGAGTCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: MAARCRRVSPRSFLLFTLVSKMS*ATESLF
Trigger: GAAGAGCGACTCTGTGGCCAAGCTCATCTTGGAGAC...TAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp TCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGCTCTTTGATGCGCCGGGCGCTGTCCTTCCTGTCCTaGTACTTTTCTGTGGACTCT +
Preference number: 5 (lower is better)
Translates to: SLTLTSAPSLMSSLMRRALSFLS*YFSVDS
Trigger: AGAGTCCACAGAAAAGTACAAGGACAGGAAGGACAG...CGCCCGGCGCATCAAAGAGCTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp GATTCCGTGGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTTCTCTGGGATGCACTGCAGAGTaGTGGGCTCCATTTCCATCT +
Preference number: 5 (lower is better)
Translates to: DSVVGNGERPSAEGALSLGCTAE*WAPFPS
Trigger: AGATGGAAATGGAGCCCACAACTCTGCAGTGCATCC...CAGAGAAAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
CDS-3UTR CAA 90 bp CACCTCCGCACCTGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTGTTTACTATAGACTCTaGTCGCCCACAGAATCAGTT +
Preference number: 5 (lower is better)
Translates to: HLRTCSQQLLRDVVVAPVVYYRL*SPTESV
Trigger: AACTGATTCTGTGGGCGACAAGAGTCTATAGTAAAC...AACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCAGGTGCGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000643964.1
CDS-3UTR CAA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGTGTGACCCCTCAGCCTaGCTGTCCTGCCTGCAACCA +
Preference number: 5 (lower is better)
Translates to: LWFCALATPLGVTSFQTRCDPSA*LSCLQP
Trigger: TGGTTGCAGGCAGGACAGCAAGGCTGAGGGGTCACA...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp GAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCTTCAACTTCACACACTaGTCGCCTCTAGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: EGAKHLTLKEPACAWQHCFNFTH*SPLALG
Trigger: GCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAA...GCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CAA 90 bp AGCCGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCAGCTTCCCGCCGTGTGTaGCTAACATCCCCACACACG +
Preference number: 5 (lower is better)
Translates to: SRQNSRLLSEAPGTNMTSASRRV*LTSPHT
Trigger: CGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGC...TGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CAA 90 bp CTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGGCATTCAGAGTTCCAGCTTCCCGCCGTGTGTaGCTAACATCCCCACACACG +
Preference number: 5 (lower is better)
Translates to: LHTLVASSTGQGLAFRVPASRRV*LTSPHT
Trigger: CGTGTGTGGGGATGTTAGCAACACACGGCGGGAAGC...TGGAACTCTGAATGCCAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CAA 90 bp CCGTGTGTTGCTAACATCCCCACACACGTGAGTGCCTTGGGACCCTCGTCAACAGGGTCTGCTACACGCTaGGTGAGAAACTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: PCVANIPTHVSALGPSSTGSATR*VRNCIR
Trigger: CCTGATGCAGTTTCTCACCAAGCGTGTAGCAGACCC...TGTTGACGAGGGTCCCAAGGCACTCACGTGTGTGGGGATGTTAGCAACACACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CAA 90 bp ACTGAAGGTGCCAAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACGGGTCTGCTACACGCTaGGTGAGAAACTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: TEGAKHLTLKEPACAWQHGSATR*VRNCIR
Trigger: CCTGATGCAGTTTCTCACCAAGCGTGTAGCAGACCC...GTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTTGGCACCTTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS-3UTR CAA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCATCAACCGTCTGGCCTaGTTCCTCCACGGCAGGACC +
Preference number: 5 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCINRLA*FLHGRT
Trigger: GGTCCTGCCGTGGAGGAACAAGGCCAGACGGTTGAT...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642333.1
CDS CCA 90 bp ACAAGCCTACACCAAAGCCGGCCGCTGTCTTTGCAGGTAACGCATTaGACGGTTCCTGCCGTACCTTTTCCCTTCAAGTTGTGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: TSLHQSRPLSLQVTH*TVPAVPFPFKLCSG
Trigger: CCCAGAGCACAACTTGAAGGGAAAAGGTACGGCAGGAACCGTCCAATGCGTTACCTGCAAAGACAGCGGCCGGCTTTGGTGTAGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566858.5
CDS CCA 90 bp AGCCTTTTTCGAACTCGGAGTCCGTGTTGTTGCCGTCGACTGAACTaGAAGGTGCGAAGGATGGTGCGTCTTCCTCTTCTGAGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: SLFRTRSPCCCRRLN*KVRRMVRLPLLSSP
Trigger: CGGAGAGCTCAGAAGAGGAAGACGCACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS CCA 90 bp CTCATCAAACTCATACTCGTCCTTGACGGGGGCCGTGGCCTTCTGTaGCTCTGGGTTCTTGGCCTTGTGCTTGAGCCTTTTTCGAACTCG +
Preference number: 5 (lower is better)
Translates to: LIKLILVLDGGRGLL*LWVLGLVLEPFSNS
Trigger: CGAGTTCGAAAAAGGCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCACGGCCCCCGTCAAGGACGAGTATGAGTTTGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS CCA 90 bp TTTATCTTTATCCTGCTGGTTCTTCCCGAGGCAGCTCAGCGGTTCTaGGATTCCGTGGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: FIFILLVLPEAAQRF*DSVVGNGERPSAEG
Trigger: CCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATCCCAGAACCGCTGAGCTGCCTCGGGAAGAACCAGCAGGATAAAGATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647539.1
CDS CCA 90 bp GGGTGCTTTGGTGTTGTGTCCACTGCAGGCCAAGGAGGGGACAGATaGGCATTACTGTGGGGTGGTCCTGCTTTGTCCAATCTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: GCFGVVSTAGQGGDR*ALLWGGPALSNLQE
Trigger: CTCTTGAAGATTGGACAAAGCAGGACCACCCCACAGTAATGCCCATCTGTCCCCTCCTTGGCCTGCAGTGGACACAACACCAAAGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646345.1
CDS-3UTR CAA 90 bp CTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGGAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: LWFCALATPLGVTSFQTRRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...CCTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCATCGCTGATGAGCTCTTaGATGCGCCGGGCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSSLMSS*MRRASP
Trigger: CGGGGACGCCCGGCGCATCAAAGAGCTCATCAGCGA...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp TGGGGGCCATTATCCTGCCTACCTCACCGTAATTCCAGGGTCCTTGACATTTTTGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: WGPLSCLPHRNSRVLDIFAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...AAAAATGTCAAGGACCCTGGAATTACGGTGAGGTAGGCAGGATAATGGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGCGAAGTCCTTGACGTaGACGTCTGCCCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LESMVLCTGHTSWCYLIPAKSLT*TSAPSL
Trigger: CAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGC...TGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp CGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCTTAACTCGGAGTCCGTGTaGTTGCCGTCGACTGAACTG +
Preference number: 5 (lower is better)
Translates to: RLGAGGSLHARFSCSLYLNSESV*LPSTEL
Trigger: CAGTTCAGTCGACGGCAACAACACGGACTCCGAGTT...AAGATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp AGTCCTTTTTCAATAGGTGCTTGTCGTCCACCGGAGGAACCCTGTCCTGCTCGTTGTGGCTCTGGGTTCTaGGCCTTGTGCTTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: SPFSIGACRPPEEPCPARCGSGF*ALCLRP
Trigger: AGGCCTCAAGCACAAGGCCAAGAACCCAGAGCCACA...ACGAGCAGGACAGGGTTCCTCCGGTGGACGACAAGCACCTATTGAAAAAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp AAGCACCTAACGCTGAAGGAACCAGCATGTGCCTGGCAGCACTGCAGAGAGCACGGATGCACTGCAGAGTaGTGGGCTCCATTTCCATCT +
Preference number: 5 (lower is better)
Translates to: KHLTLKEPACAWQHCREHGCTAE*WAPFPS
Trigger: AGATGGAAATGGAGCCCACAACTCTGCAGTGCATCC...GTGCTCTCTGCAGTGCTGCCAGGCACATGCTGGTTCCTTCAGCGTTAGGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568924.1
CDS-3UTR CAA 90 bp AGCCGTCAGAACAGCCGTCTCCTATCTGAGGCACCAGGAACAAACATGACGTCAACACACGTGAGTGCCTaGGGACCCTCGTCAACACAC +
Preference number: 5 (lower is better)
Translates to: SRQNSRLLSEAPGTNMTSTHVSA*GPSSTH
Trigger: GTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGT...TGACGTCATGTTTGTTCCTGGTGCCTCAGATAGGAGACGGCTGTTCTGACGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS TCA 90 bp GCGAGTTTCAGTGCCCAGGAATCCCCAGAAGGAAATGGCCATTGGTaGCGGCAAGCCTGTTCTGGGCATAACACAACACACTCAAGCGAG +
Preference number: 5 (lower is better)
Translates to: ASFSAQESPEGNGHW*RQACSGHNTTHSSE
Trigger: CTCGCTTGAGTGTGTTGTGTTATGCCCAGAACAGGCTTGCCGTCACCAATGGCCATTTCCTTCTGGGGATTCCTGGGCACTGAAACTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 90 bp GCCTACCTACATACACCCCGAGGAAGGCACAGCACCCACAGTACGTaGGTTCACTGCAAGGAAAGAATCTTCCAGTCACCGTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: AYLHTPRGRHSTHST*VHCKERIFQSPFLC
Trigger: ACAGAGGAACGGTGACTGGAAGATTCTTTCCTTGCAGTGAACGCACGTACTGTGGGTGCTGTGCCTTCCTCGGGGTGTATGTAGGTAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566973.1
CDS GCA 90 bp TTGGCCTTGTGCTTGAGCCTTTTTCGAACTCGGAGTCCGTGTTGTTaGCGTCGACTGAACTGGAAGGTGCGAAGGATGGTGCGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LALCLSLFRTRSPCC*RRLNWKVRRMVRLP
Trigger: AGGAAGACGCACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCTCAAGCACAAGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS GCA 90 bp GCTGTGCTACATACACCCCGAGGAAGGCACAGCACCCACAGTACGTaGGTTCACTGCAAGGAAAGAATCTTCCAGTCACCGTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: AVLHTPRGRHSTHST*VHCKERIFQSPFLC
Trigger: ACAGAGGAACGGTGACTGGAAGATTCTTTCCTTGCAGTGAACGCACGTACTGTGGGTGCTGTGCCTTCCTCGGGGTGTATGTAGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642333.1
CDS-3UTR CAA 90 bp GAAGACATCAGTGAGACCCGCCGCATCTCCAGGCAGCACCCCTGCTTTCCGGCACCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: EDISETRRISRQHPCFPAPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...TGCCGGAAAGCAGGGGTGCTGCCTGGAGATGCGGCGGGTCTCACTGATGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp ACCAGCAACCTGGATTTCCTATGCCCAGAACAGCAATGCACTGAACTCAAGTACCAGCCTGCGAAGTCCTaGACGTTGACGTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: TSNLDFLCPEQQCTELKYQPAKS*TLTSAP
Trigger: GGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTG...GTACTTGAGTTCAGTGCATTGCTGTTCTGGGCATAGGAAATCCAGGTTGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp TCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGAGTCGTCATCTAGGCCCTaGGTGTTCACCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: SMVLCTGHTSWCYLIPDESSSRP*VFTSAP
Trigger: AGGTGCGGAGGTGAACACCAAGGGCCTAGATGACGA...CTCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACTCGTCATCTAGGCCCTaGGTGTTCACCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDSSSRP*VFTSAP
Trigger: AGGTGCGGAGGTGAACACCAAGGGCCTAGATGACGA...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp TGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTAACACACGTGAGTGCCTaGGGACCCTCGTCAACACAC +
Preference number: 5 (lower is better)
Translates to: WARSGIQSSKKSHRYQWLTHVSA*GPSSTH
Trigger: GTGTGTTGACGAGGGTCCCAAGGCACTCACGTGTGT...TAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS TCA 90 bp CACGCTGAGATGCTCCAGGGTCCATGCAGTTCAAGAACATGGTCGTaGTGTGTTGAAGCAGACCTGTCTTGGTTGTCCCTCAGATCCCAG +
Preference number: 5 (lower is better)
Translates to: HAEMLQGPCSSRTWS*CVEADLSWLSLRSQ
Trigger: CTGGGATCTGAGGGACAACCAAGACAGGTCTGCTTCAACACATCACGACCATGTTCTTGAACTGCATGGACCCTGGAGCATCTCAGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562211.2
CDS CCA 90 bp ACAAGCCGTCAGGTCAGCGCGGCATCAGGATGCACTGCAGAGTTGTaGGCTCCATTTCCATCTTCCACGTATATGTCACTGAGATCACGA +
Preference number: 5 (lower is better)
Translates to: TSRQVSAASGCTAEL*APFPSSTYMSLRSR
Trigger: TCGTGATCTCAGTGACATATACGTGGAAGATGGAAATGGAGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCTGACCTGACGGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
CDS-3UTR CAA 90 bp ATCCTTTGGATCAGAACACACTCAACGATGCAGACACCTGCTGGTTCTTCCCGAAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: ILWIRTHSTMQTPAGSSRRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...TCGGGAAGAACCAGCAGGTGTCTGCATCGTTGAGTGTGTTCTGATCCAAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR CAA 90 bp GGTGCTGGCAGGGCAGGATCCTTCCTTTCCTCCATCATGGGGGCTTGTAGTGCCCCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: GAGRAGSFLSSIMGACSAPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...GGCACTACAAGCCCCCATGATGGAGGAAAGGAAGGATCCTGCCCTGCCAGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS-3UTR CAA 90 bp CGCCGTCCAGCCTGCGAAGTCCTTGACGTTGACGTCTGCCCCCTCGCTGATGAGTCACTGGATTTCTCTTaGTATCTTTCTGGTTTTGTC +
Preference number: 5 (lower is better)
Translates to: RRPACEVLDVDVCPLADESLDFS*YLSGFV
Trigger: GACAAAACCAGAAAGATACAAAGAGAAATCCAGTGA...CTCATCAGCGAGGGGGCAGACGTCAACGTCAAGGACTTCGCAGGCTGGACGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp TTTCCGAAAGGTAGCCAGGGACACTTTTATGCTTTTCGGTCTGCTCTTTCCTCTGGCTTCGCCTTCTCCTaGAGCTTGGGGTCTCCGGAC +
Preference number: 5 (lower is better)
Translates to: FPKGSQGHFYAFRSALSSGFAFS*SLGSPD
Trigger: GTCCGGAGACCCCAAGCTCAAGGAGAAGGCGAAGCC...AGAGGAAAGAGCAGACCGAAAAGCATAAAAGTGTCCCTGGCTACCTTTCGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp TGCAGCCAGCAGCTGCTTCGCGACGTCGTAGTAGCCCCGGTTACAGGCCTCGTGCTTTATCTTTATCCTTaGGATCAGAACACACTCAAC +
Preference number: 5 (lower is better)
Translates to: CSQQLLRDVVVAPVTGLVLYLYP*DQNTLN
Trigger: GTTGAGTGTGTTCTGATCCAAAGGATAAAGATAAAG...CACGAGGCCTGTAACCGGGGCTACTACGACGTCGCGAAGCAGCTGCTGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS TCA 90 bp GTCTGCCAGTTCATGTTTTCCATGAGCAGCACTGTGATGCCACGCTaGGATGCTCCAGGGTCCATGCAGTTCAAGAACATGGTCGTGATG +
Preference number: 5 (lower is better)
Translates to: VCQFMFSMSSTVMPR*DAPGSMQFKNMVVM
Trigger: CATCACGACCATGTTCTTGAACTGCATGGACCCTGGAGCATCTCAGCGTGGCATCACAGTGCTGCTCATGGAAAACATGAACTGGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562211.2
CDS-3UTR CAA 90 bp CCCACCCCACCGGAACAAGCCGTTTCTCAAGTGAGCTCTTTAAGGCCAAGGCACCTTTATCTTTGGTTTTaGAGGCAGAGTTGGGCGTTC +
Preference number: 5 (lower is better)
Translates to: PTPPEQAVSQVSSLRPRHLYLWF*RQSWAF
Trigger: GAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAG...GTGCCTTGGCCTTAAAGAGCTCACTTGAGAAACGGCTTGTTCCGGTGGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CTGCCTGCAACCAGGGGCTCTCCACGGAGCTCTGATGAAGACATCAGTGAGACCGTTTACTATAGACTCTaGTCGCCCACAGAATCAGTT +
Preference number: 5 (lower is better)
Translates to: LPATRGSPRSSDEDISETVYYRL*SPTESV
Trigger: AACTGATTCTGTGGGCGACAAGAGTCTATAGTAAAC...GGTCTCACTGATGTCTTCATCAGAGCTCCGTGGAGAGCCCCTGGTTGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp GAGAAGCCTCTTCAACTTCACACACTTGTCGCCTCTAGCACTGGGCAAGGTCTGCACATAAAACAGTCCTaGAAGCTGGGAGTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: EKPLQLHTLVASSTGQGLHIKQS*KLGVPS
Trigger: AGAGGGGACTCCCAGCTTCAAGGACTGTTTTATGTG...CAGACCTTGCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAAGAGGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS-3UTR CAA 90 bp TGGGCAAGGTCTGGCATTCAGAGTTCCAAGAAGTCCCACAGATACCAGTGGCTATTCAACTTCACACACTaGTCGCCTCTAGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: WARSGIQSSKKSHRYQWLFNFTH*SPLALG
Trigger: GCCCAGTGCTAGAGGCGACAAGTGTGTGAAGTTGAA...TAGCCACTGGTATCTGTGGGACTTCTTGGAACTCTGAATGCCAGACCTTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567736.6
ENST00000645664.1
ENST00000647238.1
CDS TCA 90 bp GATGCTCCAGGGTCCATGCAGTTCAAGAACATGGTCGTGATGTGTTaGAGCAGACCTGTCTTGGTTGTCCCTCAGATCCCAGCTACAGAA +
Preference number: 5 (lower is better)
Translates to: DAPGSMQFKNMVVMC*SRPVLVVPQIPATE
Trigger: TTCTGTAGCTGGGATCTGAGGGACAACCAAGACAGGTCTGCTTCAACACATCACGACCATGTTCTTGAACTGCATGGACCCTGGAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562211.2
CDS GCA 90 bp CCAGTTCATGTTTTCCATGAGCAGCACTGTGATGCCACGCTGAGATaGTCCAGGGTCCATGCAGTTCAAGAACATGGTCGTGATGTGTTG +
Preference number: 5 (lower is better)
Translates to: PVHVFHEQHCDATLR*SRVHAVQEHGRDVL
Trigger: CAACACATCACGACCATGTTCTTGAACTGCATGGACCCTGGAGCATCTCAGCGTGGCATCACAGTGCTGCTCATGGAAAACATGAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562211.2
CDS GCA 90 bp CACGCAGCATTCATCTTGTGCATATCCTTCATGACAAAACAAGTATaGACAAAGCACTGCTGCCGCACACCAGACACAGCGGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: HAAFILCISFMTKQV*TKHCCRTPDTAASG
Trigger: TCCAGAGGCCGCTGTGTCTGGTGTGCGGCAGCAGTGCTTTGTGCATACTTGTTTTGTCATGAAGGATATGCACAAGATGAATGCTGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS-3UTR CAA 90 bp TTGAGGGTGGGCAAGGCGAAAACTCGCTTTCCTGTGCCCCACATCATGGAACCGCCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LRVGKAKTRFPVPHIMEPPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...CGGTTCCATGATGTGGGGCACAGGAAAGCGAGTTTTCGCCTTGCCCACCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp AGTGCCCACTGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTGTTTACTATAGACTCTaGTCGCCCACAGAATCAGTT +
Preference number: 5 (lower is better)
Translates to: SAHCSWAGHNGHFLKLESVYYRL*SPTESV
Trigger: AACTGATTCTGTGGGCGACAAGAGTCTATAGTAAAC...AGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCAGTGGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCCACTGGCCACACCTCTaGGTGTTACCTCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCHWPHL*VLPHSR
Trigger: TCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTG...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp TGCTCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGCTTTATCTTTGGTTTTaGAGGCAGAGTTGGGCGTTC +
Preference number: 5 (lower is better)
Translates to: CSWAGHNGHFLKLESMVLLYLWF*RQSWAF
Trigger: GAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAG...CAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp TGGCGGCTCGGTGCAGGCGGGTCTCTCCACGCTCGTTTCTCTTGTTCACTTTATCACTGTCCCTTCTCCTaGTTTTTGTGTTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: WRLGAGGSLHARFSCSLYHCPFS*FLCLCF
Trigger: AAAACACAAACACAAAAACAAGGAGAAGGGACAGTG...ATAAAGTGAACAAGAGAAACGAGCGTGGAGAGACCCGCCTGCACCGAGCCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp TTCTGGGATTCCGTGGTCGGCAATGGTGAGAGACCGTCTGCAGAAGGGGCCCTTGAGATCACGATTCTTTaGGAAAAATCTTTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: FWDSVVGNGERPSAEGALEITIL*EKSFSQ
Trigger: CTGGGAAAAAGATTTTTCCAAAAGAATCGTGATCTC...AAGGGCCCCTTCTGCAGACGGTCTCTCACCATTGCCGACCACGGAATCCCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378332.7
CDS CCA 90 bp CTAGAACGTCGATGGTCAACACTAGGCAGCTTCATCTGTCATACGTaGACTCCCTTTCAAAACTCCAGGTGTGTGTGTCTGTCATGTGGA +
Preference number: 5 (lower is better)
Translates to: LERRWSTLGSFICHT*TPFQNSRCVCLSCG
Trigger: TCCACATGACAGACACACACACCTGGAGTTTTGAAAGGGAGTCCACGTATGACAGATGAAGCTGCCTAGTGTTGACCATCGACGTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS-3UTR CAA 90 bp TCGCCCACAGAATCAGTTTCCAGTTCGTGTGTGACATGTTCTATTGTTGAATCAAGGGGTGCTTTGGTGTaGTGTCCACTGGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: SPTESVSSSCVTCSIVESRGALV*CPLGCW
Trigger: CCAACAGCCCAGTGGACACAACACCAAAGCACCCCT...TGATTCAACAATAGAACATGTCACACACGAACTGGAAACTGATTCTGTGGGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp GTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGACTTTATCTTTGGTTTTaGAGGCAGAGTTGGGCGTTC +
Preference number: 5 (lower is better)
Translates to: VYGSVHWPHLLVLPHSRRLYLWF*RQSWAF
Trigger: GAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAG...TCGTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp AGTCCTTTTTCAATAGGTGCTTGTCGTCCACCGGAGGAACCCTGTCCTGCTCGTCCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: SPFSIGACRPPEEPCPARPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...ACGAGCAGGACAGGGTTCCTCCGGTGGACGACAAGCACCTATTGAAAAAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330736.10
CDS-3UTR CAA 90 bp TCCTGGGCCGGCCACAATGGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCGTTTACTATAGACTCTaGTCGCCCACAGAATCAGTT +
Preference number: 5 (lower is better)
Translates to: SWAGHNGHFLKLESMVLCVYYRL*SPTESV
Trigger: AACTGATTCTGTGGGCGACAAGAGTCTATAGTAAAC...GCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCCATTGTGGCCGGCCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS GCA 90 bp GACTGTTTCAACGCACTACGTCCCGAGCACGCAGCATTCATCTTGTaGATATCCTTCATGACAAAACAAGTATGCACAAAGCACTGCTGC +
Preference number: 5 (lower is better)
Translates to: DCFNALRPEHAAFIL*ISFMTKQVCTKHCC
Trigger: GCAGCAGTGCTTTGTGCATACTTGTTTTGTCATGAAGGATATGCACAAGATGAATGCTGCGTGCTCGGGACGTAGTGCGTTGAAACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS-3UTR CAA 90 bp GGTGACTACACAAAACCTCAGGCTTACAATTGTGGAGGTCAGAGGTCAAGGTGCCTTTATCTTTGGTTTTaGAGGCAGAGTTGGGCGTTC +
Preference number: 5 (lower is better)
Translates to: GDYTKPQAYNCGGQRSRCLYLWF*RQSWAF
Trigger: GAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAG...GCACCTTGACCTCTGACCTCCACAATTGTAAGCCTGAGGTTTTGTGTAGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCACTTTATCTTTGGTTTTaGAGGCAGAGTTGGGCGTTC +
Preference number: 5 (lower is better)
Translates to: LESMVLCTGHTSWCYLIPLYLWF*RQSWAF
Trigger: GAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAG...TGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp GGCCACTTTCTAAAGCTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGCCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: GHFLKLESMVLCTGHTSWPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...CCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAGCTTTAGAAAGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS-3UTR CAA 90 bp GAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCAGACGTTTACTATAGACTCTaGTCGCCCACAGAATCAGTT +
Preference number: 5 (lower is better)
Translates to: ESMVLCTGHTSWCYLIPDVYYRL*SPTESV
Trigger: AACTGATTCTGTGGGCGACAAGAGTCTATAGTAAAC...GTCTGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp GGTCACATGACTGACAGAGACAACCATGGTGACACAGCTCTTTTCAGCTGTTCACTTTATCTTTGGTTTTaGAGGCAGAGTTGGGCGTTC +
Preference number: 5 (lower is better)
Translates to: GHMTDRDNHGDTALFSCSLYLWF*RQSWAF
Trigger: GAACGCCCAACTCTGCCTCAAAAACCAAAGATAAAG...TGAACAGCTGAAAAGAGCTGTGTCACCATGGTTGTCTCTGTCAGTCATGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CTGCTCAAATCCAACCAGACCTACACGGCTAGCGGATACGAGCCTTTCATAGATCCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LLKSNQTYTASGYEPFIDPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...ATCTATGAAAGGCTCGTATCCGCTAGCCGTGTAGGTCTGGTTGGATTTGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS-3UTR CAA 90 bp CTTGAGTCTATGGTTCTGTGCACTGGCCACACCTCTTGGTGTTACCTCATTCCACCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LESMVLCTGHTSWCYLIPPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...TGGAATGAGGTAACACCAAGAGGTGTGGCCAGTGCACAGAACCATAGACTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562275.6
ENST00000642333.1
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
ENST00000646975.1
CDS CCA 90 bp AGCACCAATCTTCAGTCAAAGAATGACCGACCGACATGCAAACTCTaGTTGTTCGGACATGAGTACTGGCAGATCATTTCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: STNLQSKNDRPTCKL*LFGHEYWQIISSSS
Trigger: AGAAGAGGAAGAAATGATCTGCCAGTACTCATGTCCGAACAACCAGAGTTTGCATGTCGGTCGGTCATTCTTTGACTGAAGATTGGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS-3UTR CAA 90 bp TATGTGTGTGAGTTTTCTATGGTGACTACACAAAACCTCAGGCTTACAATTGTGCCACGCTCGTTTCTCTaGTTCACTTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: YVCEFSMVTTQNLRLTIVPRSFL*FTLSLV
Trigger: AACCAAAGATAAAGTGAACAAGAGAAACGAGCGTGG...CACAATTGTAAGCCTGAGGTTTTGTGTAGTCACCATAGAAAACTCACACACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378332.7
ENST00000562275.6
ENST00000642695.1
ENST00000643964.1
ENST00000644784.1
ENST00000646838.1
CDS CCA 72 bp GGTCAGGGCCAGCACGGCGAGGGGCCTCAGGCGGCCTaGGCCCACAGAGCCAACGCGTGTGGAGGGCCCCTG +
Preference number: 6 (lower is better)
Translates to: GQGQHGEGPQAA*AHRANACGGPL
Trigger: CAGGGGCCCTCCACACGCGTTGGCTCTGTGGGCCCAGGCCGCCTGAGGCCCCTCGCCGTGCTGGCCCTGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 72 bp TGGTGGGCGAGGCTGTGGCTCCTCTGTGGGAAGGGCTaGAGCCGCGGGGGCTCCCGCACCCCTCCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: WWARLWLLCGKG*SRGGSRTPPVL
Trigger: GAGCACAGGAGGGGTGCGGGAGCCCCCGCGGCTGCAGCCCTTCCCACAGAGGAGCCACAGCCTCGCCCACCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS GCA 72 bp GCCTGGGCTGCTCCGGGCTGCCTGTGGAGGGCTGACTaGAGGAGGGGCCGCGGGCTGGTACCTGTGTCCGAG +
Preference number: 6 (lower is better)
Translates to: AWAAPGCLWRAD*RRGRGLVPVSE
Trigger: CTCGGACACAGGTACCAGCCCGCGGCCCCTCCTGCAGTCAGCCCTCCACAGGCAGCCCGGAGCAGCCCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643147.1
CDS CCA 72 bp GCCTCAGGCGGCCTGGGCCCACAGAGCCAACGCGTGTaGAGGGCCCCTGGCTGTACCTCACGCCACCTGCGA +
Preference number: 6 (lower is better)
Translates to: ASGGLGPQSQRV*RAPGCTSRHLR
Trigger: TCGCAGGTGGCGTGAGGTACAGCCAGGGGCCCTCCACACGCGTTGGCTCTGTGGGCCCAGGCCGCCTGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CCA 72 bp GCGCCCAGGGACTGCCTGGCGAGGCTCTGGGTGTGGTaGGCGAGGCTGTGGCTCCTCTGTGGGAAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: APRDCLARLWVW*ARLWLLCGKGC
Trigger: GCAGCCCTTCCCACAGAGGAGCCACAGCCTCGCCCACCACACCCAGAGCCTCGCCAGGCAGTCCCTGGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS CCA 72 bp CGAGCGCCCAGGGACTGCCTGGCGAGGCTCTGGGTGTaGTGGGCGAGGCTGTGGCTCCTCTGTGGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RAPRDCLARLWV*WARLWLLCGKG
Trigger: GCCCTTCCCACAGAGGAGCCACAGCCTCGCCCACCACACCCAGAGCCTCGCCAGGCAGTCCCTGGGCGCTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS GCA 72 bp GCAGGGTGGGGCCCGAGGGCGCCCGCTCCTGGATCCTaGACAACGTCCCTGACATGTCGGCCAGCAGCACAG +
Preference number: 6 (lower is better)
Translates to: AGWGPRAPAPGS*TTSLTCRPAAQ
Trigger: CTGTGCTGCTGGCCGACATGTCAGGGACGTTGTGCAGGATCCAGGAGCGGGCGCCCTCGGGCCCCACCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CCA 72 bp TTCGACCCGAGAGCAGCCCCTCACGGTCTGAGGGTGTaGGAGCCGAGCGCCCAGGGACTGCCTGGCGAGGCT +
Preference number: 6 (lower is better)
Translates to: FDPRAAPHGLRV*EPSAQGLPGEA
Trigger: AGCCTCGCCAGGCAGTCCCTGGGCGCTCGGCTCCCACACCCTCAGACCGTGAGGGGCTGCTCTCGGGTCGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS GCA 72 bp GGCTGGGGGCCGAGGACCAAGCTGCCCCAAGGGAGCTaGAGCTCTGCTGTCCCAGAAGCCCAAGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: GWGPRTKLPQGS*SSAVPEAQGRR
Trigger: CCTCCTCCCTTGGGCTTCTGGGACAGCAGAGCTGCAGCTCCCTTGGGGCAGCTTGGTCCTCGGCCCCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 72 bp AGGGGCCGCGGGCTGGTACCTGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCGGTGAAGGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: RGRGLVPVSESF*SPLAPAVKGSF
Trigger: GAAGCTGCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACACAGGTACCAGCCCGCGGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643147.1
CDS CCA 72 bp GGCTCGCGGGGAAGGGAAAGACCGCAGAGGTCACCGTaGGTGCAGTGCCCCTCGTGCTCCCTGGGAGCAGAG +
Preference number: 6 (lower is better)
Translates to: GSRGRERPQRSP*VQCPSCSLGAE
Trigger: CTCTGCTCCCAGGGAGCACGAGGGGCACTGCACCCACGGTGACCTCTGCGGTCTTTCCCTTCCCCGCGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CCA 72 bp AGGCGGGCAGGGTGCAGGCACTTGGACTCATGGGCCTaGCATGCAGACGGGCCCTACCTGGCTCTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: RRAGCRHLDSWA*HADGPYLALQG
Trigger: CCCCTGGAGAGCCAGGTAGGGCCCGTCTGCATGCCAGGCCCATGAGTCCAAGTGCCTGCACCCTGCCCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645666.1
CDS CCA 72 bp GAGGGGAGGCGGGCAGGGTGCAGGCACTTGGACTCATaGGCCTGGCATGCAGACGGGCCCTACCTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: EGRRAGCRHLDS*AWHADGPYLAL
Trigger: GAGAGCCAGGTAGGGCCCGTCTGCATGCCAGGCCCATGAGTCCAAGTGCCTGCACCCTGCCCGCCTCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645666.1
CDS TCA 72 bp CGAGGGCGCCCGCTCCTGGATCCTGCACAACGTCCCTaGCATGTCGGCCAGCAGCACAGACCCAGCCTCACC +
Preference number: 6 (lower is better)
Translates to: RGRPLLDPAQRP*HVGQQHRPSLT
Trigger: GGTGAGGCTGGGTCTGTGCTGCTGGCCGACATGTCAGGGACGTTGTGCAGGATCCAGGAGCGGGCGCCCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 72 bp AAGCAGGACCCCGGCGGTCCTGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCGGTGAAGGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: KQDPGGPVSESF*SPLAPAVKGSF
Trigger: GAAGCTGCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACACAGGACCGCCGGGGTCCTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563291.1
ENST00000566858.5
ENST00000567736.6
ENST00000647238.1
CDS GCA 72 bp CGCGGGGAAGGGAAAGACCGCAGAGGTCACCGTGGGTaGAGTGCCCCTCGTGCTCCCTGGGAGCAGAGCTCA +
Preference number: 6 (lower is better)
Translates to: RGEGKDRRGHRG*SAPRAPWEQSS
Trigger: TGAGCTCTGCTCCCAGGGAGCACGAGGGGCACTGCACCCACGGTGACCTCTGCGGTCTTTCCCTTCCCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 72 bp CGGGCTCTTGCCCAGCGCTCTGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCGGTGAAGGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: RALAQRSVSESF*SPLAPAVKGSF
Trigger: GAAGCTGCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACACAGAGCGCTGGGCAAGAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644045.1
CDS GCA 72 bp TCGTGCAGCGCCGTCCAGCCTGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCGGTGAAGGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SCSAVQPVSESF*SPLAPAVKGSF
Trigger: GAAGCTGCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACACAGGCTGGACGGCGCTGCACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642443.1
CDS CCA 72 bp CCTGGGCCCACAGAGCCAACGCGTGTGGAGGGCCCCTaGCTGTACCTCACGCCACCTGCGAGTTTCAGTGCC +
Preference number: 6 (lower is better)
Translates to: PGPTEPTRVEGP*LYLTPPASFSA
Trigger: GGCACTGAAACTCGCAGGTGGCGTGAGGTACAGCCAGGGGCCCTCCACACGCGTTGGCTCTGTGGGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS TCA 72 bp GGTCCCTTTGCACAGGGCTTGTCCTCAGCACAGCCATaGGGCTGCGACCAGGCAGAGCCCCTTCCCTGCGCC +
Preference number: 6 (lower is better)
Translates to: GPFAQGLSSAQP*GCDQAEPLPCA
Trigger: GGCGCAGGGAAGGGGCTCTGCCTGGTCGCAGCCTCATGGCTGTGCTGAGGACAAGCCCTGTGCAAAGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646345.1
CDS GCA 72 bp AGCTCAGGCCGTCACCGAGGACAGACGGGTGGGCTCTaGCTCCCCCATGAGGAATCCCTGTGCCTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: SSGRHRGQTGGL*LPHEESLCLLG
Trigger: TCCCAGCAGGCACAGGGATTCCTCATGGGGGAGGCAGAGCCCACCCGTCTGTCCTCGGTGACGGCCTGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 72 bp AGGGCTGCAGCCGCGGGGGCTCCCGCACCCCTCCTGTaGTCTCCTTCAGAAGGGCTCTGCCTCCTTTGGATT +
Preference number: 6 (lower is better)
Translates to: RAAAAGAPAPLL*SPSEGLCLLWI
Trigger: AATCCAAAGGAGGCAGAGCCCTTCTGAAGGAGAGCACAGGAGGGGTGCGGGAGCCCCCGCGGCTGCAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS GCA 72 bp TTCCCTCCTGTCTCTGGAGGCAGCGCCCTGAGGATGTaGTACAGTGCGGGGACAAGCCAGGTGGGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: FPPVSGGSALRM*YSAGTSQVGSC
Trigger: GCAGCTCCCCACCTGGCTTGTCCCCGCACTGTAGCACATCCTCAGGGCGCTGCCTCCAGAGACAGGAGGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568100.2
CDS GCA 72 bp GCAGCAGCAGCTTCACCACCTGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCGGTGAAGGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: AAAASPPVSESF*SPLAPAVKGSF
Trigger: GAAGCTGCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACACAGGTGGTGAAGCTGCTGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567699.2
CDS GCA 72 bp GGAAGGGAAAGACCGCAGAGGTCACCGTGGGTGCAGTaGCCCTCGTGCTCCCTGGGAGCAGAGCTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: GRERPQRSPWVQ*PSCSLGAELRA
Trigger: AGCTCTGAGCTCTGCTCCCAGGGAGCACGAGGGGCACTGCACCCACGGTGACCTCTGCGGTCTTTCCCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CCA 72 bp GTTGTTCACCGACAAATCCCGTGTCTGGAAGAGTCCTaGCAGGCTGCACGGGCGTGCTCCGAGGGCTGCGCG +
Preference number: 6 (lower is better)
Translates to: VVHRQIPCLEES*QAARACSEGCA
Trigger: CGCGCAGCCCTCGGAGCACGCCCGTGCAGCCTGCCAGGACTCTTCCAGACACGGGATTTGTCGGTGAACAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378330.7
ENST00000646166.1
CDS CCA 72 bp TCTCCCCTCCCGCCAACAGTGAGCTCCTCAGCAGAGTaGTGCCGGAGTGGTCGTGGAGGGCTCAGGCAAGAG +
Preference number: 6 (lower is better)
Translates to: SPLPPTVSSSAE*CRSGRGGLRQE
Trigger: CTCTTGCCTGAGCCCTCCACGACCACTCCGGCACCACTCTGCTGAGGAGCTCACTGTTGGCGGGAGGGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS TCA 72 bp GCCGAGGGCCGAGGAACCGTTACTCAGCCGTGTCAGTaGCTTCTACCAGGGGCTGCACGGCACTCAGGAGTC +
Preference number: 6 (lower is better)
Translates to: AEGRGTVTQPCQ*LLPGAARHSGV
Trigger: GACTCCTGAGTGCCGTGCAGCCCCTGGTAGAAGTCACTGACACGGCTGAGTAACGGTTCCTCGGCCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS GCA 72 bp TGTCTCTGGAGGCAGCGCCCTGAGGATGTGCTACAGTaGGGGGACAAGCCAGGTGGGGAGCTGCCCTGTAGT +
Preference number: 6 (lower is better)
Translates to: CLWRQRPEDVLQ*GDKPGGELPCS
Trigger: ACTACAGGGCAGCTCCCCACCTGGCTTGTCCCCGCACTGTAGCACATCCTCAGGGCGCTGCCTCCAGAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568100.2
CDS GCA 72 bp CTGCAGGCAGCACTGAGGCCCATCCTGCTGGGAGAATaGCGCTCTGAGGGCAGTGGGACTGCCAGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: LQAALRPILLGE*RSEGSGTASKG
Trigger: TCCTTTGCTGGCAGTCCCACTGCCCTCAGAGCGGCATTCTCCCAGCAGGATGGGCCTCAGTGCTGCCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568512.6
ENST00000644139.1
CDS CCA 72 bp GGCTCTGCCTCCCCCATGAGGAATCCCTGTGCCTGCTaGGAAAGACCCCAGTGGGTAGGAGGAGGTGGGAAC +
Preference number: 6 (lower is better)
Translates to: GSASPMRNPCAC*ERPQWVGGGGN
Trigger: GTTCCCACCTCCTCCTACCCACTGGGGTCTTTCCCAGCAGGCACAGGGATTCCTCATGGGGGAGGCAGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS TCA 72 bp AGCACTGAGGCCCATCCTGCTGGGAGAATGCCGCTCTaGGGGCAGTGGGACTGCCAGCAAAGGACACAGGCT +
Preference number: 6 (lower is better)
Translates to: STEAHPAGRMPL*GQWDCQQRTQA
Trigger: AGCCTGTGTCCTTTGCTGGCAGTCCCACTGCCCTCAGAGCGGCATTCTCCCAGCAGGATGGGCCTCAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568512.6
ENST00000644139.1
CDS TCA 72 bp CGGCTGCATCAACCACACAGTCCGCTAGGCACAGTGTaGGTGGAGTCGCGTGGTCTGGGAGGAGACTCCAGG +
Preference number: 6 (lower is better)
Translates to: RLHQPHSPLGTV*VESRGLGGDSR
Trigger: CCTGGAGTCTCCTCCCAGACCACGCGACTCCACTCACACTGTGCCTAGCGGACTGTGTGGTTGATGCAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 72 bp GCGTGTGGAGGGCCCCTGGCTGTACCTCACGCCACCTaGGAGTTTCAGTGCCCAGGAATCCCCAGAAGGAAA +
Preference number: 6 (lower is better)
Translates to: ACGGPLAVPHAT*EFQCPGIPRRK
Trigger: TTTCCTTCTGGGGATTCCTGGGCACTGAAACTCGCAGGTGGCGTGAGGTACAGCCAGGGGCCCTCCACACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 72 bp TTTTCAAGGAAGGGTCTCCAACTGAGCAGTCACCAGTaGAGCCTGCGTCAGGGCGCGCCTCCCTCCAGCGGT +
Preference number: 6 (lower is better)
Translates to: FSRKGLQLSSHQ*SLRQGAPPSSG
Trigger: ACCGCTGGAGGGAGGCGCGCCCTGACGCAGGCTGCACTGGTGACTGCTCAGTTGGAGACCCTTCCTTGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646838.1
CDS CCA 72 bp GGGAGGGAGGGGGTGCGATCTTGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCGTGTCGTCATCTAGGC +
Preference number: 6 (lower is better)
Translates to: GREGVRSCSARC*QRRAKACRHLG
Trigger: GCCTAGATGACGACACGCCTTTGCACGACGCTGCCAACAACGGGCACTACAAGATCGCACCCCCTCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562194.1
ENST00000644285.1
CDS CAA 90 bp AGGAAGGACCTCGGGTCTGCAGAACAGCTGGGCAGCTTCCGGCTTTaGCCTCCACAGCAGAAGTGGGGCTGTGTCTCCTCAGGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: RKDLGSAEQLGSFRL*PPQQKWGCVSSGGR
Trigger: TCTGCCACCTGAGGAGACACAGCCCCACTTCTGCTGTGGAGGCAAAAGCCGGAAGCTGCCCAGCTGTTCTGCAGACCCGAGGTCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CAA 90 bp AGGGCAGGCAGCCCTCATGGGAATGTGCTCAGAGCAGGGCCCCATTaGGAGGGATCTATTTTGGGCCCAGACGTAGCGCAAGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: RAGSPHGNVLRAGPH*EGSILGPDVAQGAG
Trigger: CCCAGCTCCTTGCGCTACGTCTGGGCCCAAAATAGATCCCTCCAAATGGGGCCCTGCTCTGAGCACATTCCCATGAGGGCTGCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS TCA 72 bp AGTGGTCCCCGTTTACGGACCCCGGAAGCTCCCGGGTaGCCCAGTCCACCTCAGAGAGTATCACCCACAGAA +
Preference number: 6 (lower is better)
Translates to: SGPRLRTPEAPG*PSPPQRVSPTE
Trigger: TTCTGTGGGTGATACTCTCTGAGGTGGACTGGGTCACCCGGGAGCTTCCGGGGTCCGTAAACGGGGACCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566973.1
CDS TCA 72 bp AATCTTCTCACGAAGGCTCTCCCCTCCCGCCAACAGTaGGCTCCTCAGCAGAGTGGTGCCGGAGTGGTCGTG +
Preference number: 6 (lower is better)
Translates to: NLLTKALPSRQQ*APQQSGAGVVV
Trigger: CACGACCACTCCGGCACCACTCTGCTGAGGAGCTCACTGTTGGCGGGAGGGGAGAGCCTTCGTGAGAAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS GCA 72 bp CAGTTCCGCAGCCCCTGTGCCTTCTCATCACGATGCTaGACAGCCGACCACACAACAGAAGGCACCGGGTCT +
Preference number: 6 (lower is better)
Translates to: QFRSPCAFSSRC*TADHTTEGTGS
Trigger: AGACCCGGTGCCTTCTGTTGTGTGGTCGGCTGTGCAGCATCGTGATGAGAAGGCACAGGGGCTGCGGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS GCA 72 bp CGTTACTCAGCCGTGTCAGTGACTTCTACCAGGGGCTaGACGGCACTCAGGAGTCAGGCCAACAGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: RYSAVSVTSTRG*TALRSQANRLC
Trigger: GCAGAGCCTGTTGGCCTGACTCCTGAGTGCCGTGCAGCCCCTGGTAGAAGTCACTGACACGGCTGAGTAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS GCA 72 bp AAGGCATCAACACAGAGCACTGTGTCCGAGTCCTTCTaGTCCCCATTGGCGCCCGCGGTGAAGGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: KASTQSTVSESF*SPLAPAVKGSF
Trigger: GAAGCTGCCCTTCACCGCGGGCGCCAATGGGGAGCAGAAGGACTCGGACACAGTGCTCTGTGTTGATGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645278.1
ENST00000645844.1
CDS CCA 72 bp ATCAGCTCTGCGTTGTTCACCGACAAATCCCGTGTCTaGAAGAGTCCTGGCAGGCTGCACGGGCGTGCTCCG +
Preference number: 6 (lower is better)
Translates to: ISSALFTDKSRV*KSPGRLHGRAP
Trigger: CGGAGCACGCCCGTGCAGCCTGCCAGGACTCTTCCAGACACGGGATTTGTCGGTGAACAACGCAGAGCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378330.7
ENST00000646166.1
CDS CCA 72 bp CTGGGCAGCTTCCGGCTTTTGCCTCCACAGCAGAAGTaGGGCTGTGTCTCCTCAGGTGGCAGAAGGTCGAGA +
Preference number: 6 (lower is better)
Translates to: LGSFRLLPPQQK*GCVSSGGRRSR
Trigger: TCTCGACCTTCTGCCACCTGAGGAGACACAGCCCCACTTCTGCTGTGGAGGCAAAAGCCGGAAGCTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CCA 72 bp CCAGCTGGAGGAAGGACCTCGGGTCTGCAGAACAGCTaGGCAGCTTCCGGCTTTTGCCTCCACAGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: PAGGRTSGLQNS*AASGFCLHSRS
Trigger: ACTTCTGCTGTGGAGGCAAAAGCCGGAAGCTGCCCAGCTGTTCTGCAGACCCGAGGTCCTTCCTCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CCA 72 bp ACACAGTCCGCTAGGCACAGTGTGAGTGGAGTCGCGTaGTCTGGGAGGAGACTCCAGGGAAGAGCCAGAACG +
Preference number: 6 (lower is better)
Translates to: TQSARHSVSGVA*SGRRLQGRART
Trigger: CGTTCTGGCTCTTCCCTGGAGTCTCCTCCCAGACCACGCGACTCCACTCACACTGTGCCTAGCGGACTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CAA 72 bp CTCGGGTCTGCAGAACAGCTGGGCAGCTTCCGGCTTTaGCCTCCACAGCAGAAGTGGGGCTGTGTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: LGSAEQLGSFRL*PPQQKWGCVSS
Trigger: TGAGGAGACACAGCCCCACTTCTGCTGTGGAGGCAAAAGCCGGAAGCTGCCCAGCTGTTCTGCAGACCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CAA 72 bp GTGCTCAGAGCAGGGCCCCATTTGGAGGGATCTATTTaGGGCCCAGACGTAGCGCAAGGAGCTGGGGGAGTG +
Preference number: 6 (lower is better)
Translates to: VLRAGPHLEGSI*GPDVAQGAGGV
Trigger: CACTCCCCCAGCTCCTTGCGCTACGTCTGGGCCCAAAATAGATCCCTCCAAATGGGGCCCTGCTCTGAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 72 bp CCCCTGGCTGTACCTCACGCCACCTGCGAGTTTCAGTaGCCAGGAATCCCCAGAAGGAAATGGCCATTGGTG +
Preference number: 6 (lower is better)
Translates to: PLAVPHATCEFQ*PGIPRRKWPLV
Trigger: CACCAATGGCCATTTCCTTCTGGGGATTCCTGGGCACTGAAACTCGCAGGTGGCGTGAGGTACAGCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 72 bp TCTTCAAGAGCCCAGGCCACCATCACGAGGTCCCTTTaGACAGGGCTTGTCCTCAGCACAGCCATGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SSRAQATITRSL*TGLVLSTAMRL
Trigger: CAGCCTCATGGCTGTGCTGAGGACAAGCCCTGTGCAAAGGGACCTCGTGATGGTGGCCTGGGCTCTTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646345.1
CDS CCA 72 bp GCACTGATGAGCCAGTTCACTGGAGGACTGCTGGGGTaGTGCGGCAAGACTGTTTCAACGCACTACGTCCCG +
Preference number: 6 (lower is better)
Translates to: ALMSQFTGGLLG*CGKTVSTHYVP
Trigger: CGGGACGTAGTGCGTTGAAACAGTCTTGCCGCACCACCCCAGCAGTCCTCCAGTGAACTGGCTCATCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CCA 72 bp ATCCTGCTGGTTCTTCCCGAGGCAGCTCAGCGGTTCTaGGATTCCGTGGTCGGCAATGGTGAGAGACCGTCT +
Preference number: 6 (lower is better)
Translates to: ILLVLPEAAQRF*DSVVGNGERPS
Trigger: AGACGGTCTCTCACCATTGCCGACCACGGAATCCCAGAACCGCTGAGCTGCCTCGGGAAGAACCAGCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647539.1
CDS CAA 90 bp GGCCAAGGAGGGGACAGATGGGCATTACTGTGGGGTGGTCCTGCTTaGTCCAATCTTCAAGAGCCCAGGCCACCATCACGAGGTCCCTTT +
Preference number: 6 (lower is better)
Translates to: GQGGDRWALLWGGPA*SNLQEPRPPSRGPF
Trigger: AAAGGGACCTCGTGATGGTGGCCTGGGCTCTTGAAGATTGGACAAAGCAGGACCACCCCACAGTAATGCCCATCTGTCCCCTCCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646345.1
CDS CCA 72 bp CGTACCAGCCTTGCAGCACCACAACAGGGACTGGGCTaGAGGCATCTGAAGGCATCAACACAGAGCACTGTG +
Preference number: 6 (lower is better)
Translates to: RTSLAAPQQGLG*RHLKASTQSTV
Trigger: CACAGTGCTCTGTGTTGATGCCTTCAGATGCCTCCAGCCCAGTCCCTGTTGTGGTGCTGCAAGGCTGGTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645278.1
ENST00000645844.1
CDS GCA 72 bp GCCGTGGCCTTCTGTGGCTCTGGGTTCTTGGCCTTGTaGTTGAGCCTTTTTCGAACTCGGAGTCCGTGTTGT +
Preference number: 6 (lower is better)
Translates to: AVAFCGSGFLAL*LSLFRTRSPCC
Trigger: ACAACACGGACTCCGAGTTCGAAAAAGGCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS GCA 72 bp AGGAGGGGACAGATGGGCATTACTGTGGGGTGGTCCTaGTTTGTCCAATCTTCAAGAGCCCAGGCCACCATC +
Preference number: 6 (lower is better)
Translates to: RRGQMGITVGWS*FVQSSRAQATI
Trigger: GATGGTGGCCTGGGCTCTTGAAGATTGGACAAAGCAGGACCACCCCACAGTAATGCCCATCTGTCCCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646345.1
CDS CCA 72 bp GGTGTTGTGTCCACTGCAGGCCAAGGAGGGGACAGATaGGCATTACTGTGGGGTGGTCCTGCTTTGTCCAAT +
Preference number: 6 (lower is better)
Translates to: GVVSTAGQGGDR*ALLWGGPALSN
Trigger: ATTGGACAAAGCAGGACCACCCCACAGTAATGCCCATCTGTCCCCTCCTTGGCCTGCAGTGGACACAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646345.1
CDS CAA 72 bp AGCTCTTCCTGCTGTGGTGCTTTAGGGCACCCACCCTaGGGCATCGTCCTGCTCCTCACCCGATCTTCATTT +
Preference number: 6 (lower is better)
Translates to: SSSCCGALGHPP*GIVLLLTRSSF
Trigger: AAATGAAGATCGGGTGAGGAGCAGGACGATGCCCAAGGGTGGGTGCCCTAAAGCACCACAGCAGGAAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000301030.10
ENST00000330736.10
ENST00000378330.7
ENST00000378332.7
ENST00000562275.6
ENST00000562816.5
ENST00000563291.1
ENST00000566858.5
ENST00000567699.2
ENST00000567736.6
ENST00000613312.4
ENST00000642333.1
ENST00000642443.1
ENST00000642600.1
ENST00000642695.1
ENST00000643147.1
ENST00000643964.1
ENST00000644045.1
ENST00000644784.1
ENST00000645278.1
ENST00000645844.1
ENST00000646838.1
ENST00000646975.1
ENST00000647238.1
CDS CAA 72 bp AGCCCTCATGGGAATGTGCTCAGAGCAGGGCCCCATTaGGAGGGATCTATTTTGGGCCCAGACGTAGCGCAA +
Preference number: 6 (lower is better)
Translates to: SPHGNVLRAGPH*EGSILGPDVAQ
Trigger: TTGCGCTACGTCTGGGCCCAAAATAGATCCCTCCAAATGGGGCCCTGCTCTGAGCACATTCCCATGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS CAA 72 bp GGGGACAGATGGGCATTACTGTGGGGTGGTCCTGCTTaGTCCAATCTTCAAGAGCCCAGGCCACCATCACGA +
Preference number: 6 (lower is better)
Translates to: GDRWALLWGGPA*SNLQEPRPPSR
Trigger: TCGTGATGGTGGCCTGGGCTCTTGAAGATTGGACAAAGCAGGACCACCCCACAGTAATGCCCATCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646345.1
CDS CAA 90 bp CACAAGCCTACACCAAAGCCGGCCGCTGTCTTTGCAGGTAACGCATaGGACGGTTCCTGCCGTACCTTTTCCCTTCAAGTTGTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: HKPTPKPAAVFAGNA*DGSCRTFSLQVVLW
Trigger: CCAGAGCACAACTTGAAGGGAAAAGGTACGGCAGGAACCGTCCAATGCGTTACCTGCAAAGACAGCGGCCGGCTTTGGTGTAGGCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566858.5
CDS CAA 90 bp TCAACCGTGCTACACACAAGCCTACACCAAAGCCGGCCGCTGTCTTaGCAGGTAACGCATTGGACGGTTCCTGCCGTACCTTTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: STVLHTSLHQSRPLS*QVTHWTVPAVPFPF
Trigger: GAAGGGAAAAGGTACGGCAGGAACCGTCCAATGCGTTACCTGCAAAGACAGCGGCCGGCTTTGGTGTAGGCTTGTGTGTAGCACGGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566858.5
CDS CAA 90 bp CTTGGCCTTGTGCTTGAGCCTTTTTCGAACTCGGAGTCCGTGTTGTaGCCGTCGACTGAACTGGAAGGTGCGAAGGATGGTGCGTCTTCC +
Preference number: 6 (lower is better)
Translates to: LGLVLEPFSNSESVL*PSTELEGAKDGASS
Trigger: GGAAGACGCACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCTCAAGCACAAGGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS TCA 72 bp TGGCCTTCTGTGGCTCTGGGTTCTTGGCCTTGTGCTTaGGCCTTTTTCGAACTCGGAGTCCGTGTTGTTGCC +
Preference number: 6 (lower is better)
Translates to: WPSVALGSWPCA*AFFELGVRVVA
Trigger: GGCAACAACACGGACTCCGAGTTCGAAAAAGGCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS GCA 72 bp CATACACCCCGAGGAAGGCACAGCACCCACAGTACGTaGGTTCACTGCAAGGAAAGAATCTTCCAGTCACCG +
Preference number: 6 (lower is better)
Translates to: HTPRGRHSTHST*VHCKERIFQSP
Trigger: CGGTGACTGGAAGATTCTTTCCTTGCAGTGAACGCACGTACTGTGGGTGCTGTGCCTTCCTCGGGGTGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566973.1
ENST00000642333.1
CDS GCA 72 bp GCCGCTGTCTTTGCAGGTAACGCATTGGACGGTTCCTaGCGTACCTTTTCCCTTCAAGTTGTGCTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: AAVFAGNALDGS*RTFSLQVVLWG
Trigger: ACCCCAGAGCACAACTTGAAGGGAAAAGGTACGGCAGGAACCGTCCAATGCGTTACCTGCAAAGACAGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566858.5
CDS GCA 72 bp CACCACCTACAAGACAGTAACACCCGCGTCAGGGACTaGTGGAGAAGCACAACTCCTCTACCGTTCCGCATA +
Preference number: 6 (lower is better)
Translates to: HHLQDSNTRVRD*WRSTTPLPFRI
Trigger: TATGCGGAACGGTAGAGGAGTTGTGCTTCTCCAGCAGTCCCTGACGCGGGTGTTACTGTCTTGTAGGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS CAA 72 bp AGGCCTCCCTGGCAGGGCTGTCACATAAAACAGTCCTaGAAGCTGGGAGTCCCCTCTTTAGACAGTTCCGCA +
Preference number: 6 (lower is better)
Translates to: RPPWQGCHIKQS*KLGVPSLDSSA
Trigger: TGCGGAACTGTCTAAAGAGGGGACTCCCAGCTTCAAGGACTGTTTTATGTGACAGCCCTGCCAGGGAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567736.6
CDS CAA 72 bp GTGGCCTTCTGTGGCTCTGGGTTCTTGGCCTTGTGCTaGAGCCTTTTTCGAACTCGGAGTCCGTGTTGTTGC +
Preference number: 6 (lower is better)
Translates to: VAFCGSGFLALC*SLFRTRSPCCC
Trigger: GCAACAACACGGACTCCGAGTTCGAAAAAGGCTCAAGCACAAGGCCAAGAACCCAGAGCCACAGAAGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS CAA 90 bp CGCACAAGCCGTCAGGTCAGCGCGGCATCAGGATGCACTGCAGAGTaGTGGGCTCCATTTCCATCTTCCACGTATATGTCACTGAGATCA +
Preference number: 6 (lower is better)
Translates to: RTSRQVSAASGCTAE*WAPFPSSTYMSLRS
Trigger: TGATCTCAGTGACATATACGTGGAAGATGGAAATGGAGCCCACAACTCTGCAGTGCATCCTGATGCCGCGCTGACCTGACGGCTTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378332.7
ENST00000568924.1
CDS CAA 90 bp GTTCTTGGCCTTGTGCTTGAGCCTTTTTCGAACTCGGAGTCCGTGTaGTTGCCGTCGACTGAACTGGAAGGTGCGAAGGATGGTGCGTCT +
Preference number: 6 (lower is better)
Translates to: VLGLVLEPFSNSESV*LPSTELEGAKDGAS
Trigger: AGACGCACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCTCAAGCACAAGGCCAAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS TCA 72 bp AGTGCCCAGGAATCCCCAGAAGGAAATGGCCATTGGTaGCGGCAAGCCTGTTCTGGGCATAACACAACACAC +
Preference number: 6 (lower is better)
Translates to: SAQESPEGNGHW*RQACSGHNTTH
Trigger: GTGTGTTGTGTTATGCCCAGAACAGGCTTGCCGTCACCAATGGCCATTTCCTTCTGGGGATTCCTGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623388.1
CDS GCA 72 bp AGAGTATCACCCACAGAATGCAAGCTGACTGGTGTGTaGCTGCCTACCTACATACACCCCGAGGAAGGCACA +
Preference number: 6 (lower is better)
Translates to: RVSPTECKLTGV*LPTYIHPEEGT
Trigger: TGTGCCTTCCTCGGGGTGTATGTAGGTAGGCAGGCACACACCAGTCAGCTTGCATTCTGTGGGTGATACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566973.1
CDS GCA 72 bp TGCTTGAGCCTTTTTCGAACTCGGAGTCCGTGTTGTTaGCGTCGACTGAACTGGAAGGTGCGAAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: CLSLFRTRSPCC*RRLNWKVRRMV
Trigger: CACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCTCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS CCA 72 bp CACCTACAAGACAGTAACACCCGCGTCAGGGACTGCTaGAGAAGCACAACTCCTCTACCGTTCCGCATAACA +
Preference number: 6 (lower is better)
Translates to: HLQDSNTRVRDC*RSTTPLPFRIT
Trigger: TGTTATGCGGAACGGTAGAGGAGTTGTGCTTCTCCAGCAGTCCCTGACGCGGGTGTTACTGTCTTGTAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645212.1
CDS CCA 72 bp GCCTCAGTTCTTTCATCGCTCTCGTCTCCCTCCATTTaGTCCACACGGTTTATTCCATCGCCCTTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: ASVLSSLSSPSI*STRFIPSPFLS
Trigger: GGAGAGGAAGGGCGATGGAATAAACCGTGTGGACCAAATGGAGGGAGACGAGAGCGATGAAAGAACTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CCA 72 bp AAAGCACTGCTGCCGCACACCAGACACAGCGGCCTCTaGACAGGAAGCACCAATCTTCAGTCAAAGAATGAC +
Preference number: 6 (lower is better)
Translates to: KALLPHTRHSGL*TGSTNLQSKND
Trigger: GTCATTCTTTGACTGAAGATTGGTGCTTCCTGTCCAGAGGCCGCTGTGTCTGGTGTGCGGCAGCAGTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CCA 72 bp ACTTGGTGTAATCCTTCACCTTGTAGTGCCCGTTGTTaGCAGCGTCGTGCAAAGGCGTGTCGTCATCTAGGC +
Preference number: 6 (lower is better)
Translates to: TWCNPSPCSARC*QRRAKACRHLG
Trigger: GCCTAGATGACGACACGCCTTTGCACGACGCTGCCAACAACGGGCACTACAAGGTGAAGGATTACACCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646975.1
CDS CAA 72 bp GTGCTTGAGCCTTTTTCGAACTCGGAGTCCGTGTTGTaGCCGTCGACTGAACTGGAAGGTGCGAAGGATGGT +
Preference number: 6 (lower is better)
Translates to: VLEPFSNSESVL*PSTELEGAKDG
Trigger: ACCATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCTCAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS GCA 72 bp GTTTTCCATGAGCAGCACTGTGATGCCACGCTGAGATaGTCCAGGGTCCATGCAGTTCAAGAACATGGTCGT +
Preference number: 6 (lower is better)
Translates to: VFHEQHCDATLR*SRVHAVQEHGR
Trigger: ACGACCATGTTCTTGAACTGCATGGACCCTGGAGCATCTCAGCGTGGCATCACAGTGCTGCTCATGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562211.2
CDS GCA 72 bp TCCTTCATGACAAAACAAGTATGCACAAAGCACTGCTaGCGCACACCAGACACAGCGGCCTCTGGACAGGAA +
Preference number: 6 (lower is better)
Translates to: SFMTKQVCTKHC*RTPDTAASGQE
Trigger: TTCCTGTCCAGAGGCCGCTGTGTCTGGTGTGCGGCAGCAGTGCTTTGTGCATACTTGTTTTGTCATGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CAA 72 bp CTTGTGCTTGAGCCTTTTTCGAACTCGGAGTCCGTGTaGTTGCCGTCGACTGAACTGGAAGGTGCGAAGGAT +
Preference number: 6 (lower is better)
Translates to: LVLEPFSNSESV*LPSTELEGAKD
Trigger: ATCCTTCGCACCTTCCAGTTCAGTCGACGGCAACAACACGGACTCCGAGTTCGAAAAAGGCTCAAGCACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613312.4
CDS CAA 72 bp AGCCTCAGTTCTTTCATCGCTCTCGTCTCCCTCCATTaGGTCCACACGGTTTATTCCATCGCCCTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: SLSSFIALVSLH*VHTVYSIALPL
Trigger: GAGAGGAAGGGCGATGGAATAAACCGTGTGGACCAAATGGAGGGAGACGAGAGCGATGAAAGAACTGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CAA 90 bp AGATGCTCCAGGGTCCATGCAGTTCAAGAACATGGTCGTGATGTGTaGAAGCAGACCTGTCTTGGTTGTCCCTCAGATCCCAGCTACAGA +
Preference number: 6 (lower is better)
Translates to: RCSRVHAVQEHGRDV*KQTCLGCPSDPSYR
Trigger: TCTGTAGCTGGGATCTGAGGGACAACCAAGACAGGTCTGCTTCAACACATCACGACCATGTTCTTGAACTGCATGGACCCTGGAGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562211.2
CDS TCA 72 bp GGGTCCATGCAGTTCAAGAACATGGTCGTGATGTGTTaGAGCAGACCTGTCTTGGTTGTCCCTCAGATCCCA +
Preference number: 6 (lower is better)
Translates to: GSMQFKNMVVMC*SRPVLVVPQIP
Trigger: TGGGATCTGAGGGACAACCAAGACAGGTCTGCTTCAACACATCACGACCATGTTCTTGAACTGCATGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562211.2
CDS GCA 72 bp ATATCCTTCATGACAAAACAAGTATGCACAAAGCACTaGTGCCGCACACCAGACACAGCGGCCTCTGGACAG +
Preference number: 6 (lower is better)
Translates to: ISFMTKQVCTKH*CRTPDTAASGQ
Trigger: CTGTCCAGAGGCCGCTGTGTCTGGTGTGCGGCAGCAGTGCTTTGTGCATACTTGTTTTGTCATGAAGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CAA 72 bp AGGGTCCATGCAGTTCAAGAACATGGTCGTGATGTGTaGAAGCAGACCTGTCTTGGTTGTCCCTCAGATCCC +
Preference number: 6 (lower is better)
Translates to: RVHAVQEHGRDV*KQTCLGCPSDP
Trigger: GGGATCTGAGGGACAACCAAGACAGGTCTGCTTCAACACATCACGACCATGTTCTTGAACTGCATGGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562211.2
CDS TCA 72 bp TTCATGTTTTCCATGAGCAGCACTGTGATGCCACGCTaGGATGCTCCAGGGTCCATGCAGTTCAAGAACATG +
Preference number: 6 (lower is better)
Translates to: FMFSMSSTVMPR*DAPGSMQFKNM
Trigger: CATGTTCTTGAACTGCATGGACCCTGGAGCATCTCAGCGTGGCATCACAGTGCTGCTCATGGAAAACATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562211.2
CDS CCA 72 bp CGATGGTCAACACTAGGCAGCTTCATCTGTCATACGTaGACTCCCTTTCAAAACTCCAGGTGTGTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: RWSTLGSFICHT*TPFQNSRCVCL
Trigger: CAGACACACACACCTGGAGTTTTGAAAGGGAGTCCACGTATGACAGATGAAGCTGCCTAGTGTTGACCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS TCA 72 bp CCGAGCACGCAGCATTCATCTTGTGCATATCCTTCATaGCAAAACAAGTATGCACAAAGCACTGCTGCCGCA +
Preference number: 6 (lower is better)
Translates to: PSTQHSSCAYPS*QNKYAQSTAAA
Trigger: TGCGGCAGCAGTGCTTTGTGCATACTTGTTTTGTCATGAAGGATATGCACAAGATGAATGCTGCGTGCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS GCA 72 bp AGAGCAGGGCTGTATATATTATGTCTGCATCAGCTCTaGGTTGTTCACCGACAAATCCCGTGTCTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: RAGLYILCLHQL*VVHRQIPCLEE
Trigger: CTCTTCCAGACACGGGATTTGTCGGTGAACAACGCAGAGCTGATGCAGACATAATATATACAGCCCTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378330.7
ENST00000646166.1
CDS CAA 72 bp CAGGGCTGTATATATTATGTCTGCATCAGCTCTGCGTaGTTCACCGACAAATCCCGTGTCTGGAAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: QGCIYYVCISSA*FTDKSRVWKSP
Trigger: AGGACTCTTCCAGACACGGGATTTGTCGGTGAACAACGCAGAGCTGATGCAGACATAATATATACAGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378330.7
ENST00000646166.1
CDS CAA 72 bp CAGTCAAAGAATGACCGACCGACATGCAAACTCTGGTaGTTCGGACATGAGTACTGGCAGATCATTTCTTCC +
Preference number: 6 (lower is better)
Translates to: QSKNDRPTCKLW*FGHEYWQIISS
Trigger: GGAAGAAATGATCTGCCAGTACTCATGTCCGAACAACCAGAGTTTGCATGTCGGTCGGTCATTCTTTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CAA 90 bp TCTGGTGGCAATGATGTATTAAGACACGCAGAGCCCTTACCCCATTaGCTACAGGAACCCAATTACATCGATTCCATAGCTGAAAGTCAG +
Preference number: 6 (lower is better)
Translates to: SGGNDVLRHAEPLPH*LQEPNYIDSIAESQ
Trigger: CTGACTTTCAGCTATGGAATCGATGTAATTGGGTTCCTGTAGCAAATGGGGTAAGGGCTCTGCGTGTCTTAATACATCATTGCCACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS GCA 72 bp AACGCACTACGTCCCGAGCACGCAGCATTCATCTTGTaGATATCCTTCATGACAAAACAAGTATGCACAAAG +
Preference number: 6 (lower is better)
Translates to: NALRPEHAAFIL*ISFMTKQVCTK
Trigger: CTTTGTGCATACTTGTTTTGTCATGAAGGATATGCACAAGATGAATGCTGCGTGCTCGGGACGTAGTGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CAA 72 bp ACAACATTTTCTCACCCAGCACACAGACTGAATAGCTaGGTACACTTGCTTCCCAGGTGTAAAACTACCTGC +
Preference number: 6 (lower is better)
Translates to: TTFSHPAHRLNS*VHLLPRCKTTC
Trigger: GCAGGTAGTTTTACACCTGGGAAGCAAGTGTACCAAGCTATTCAGTCTGTGTGCTGGGTGAGAAAATGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CAA 90 bp ACCAATCTTCAGTCAAAGAATGACCGACCGACATGCAAACTCTGGTaGTTCGGACATGAGTACTGGCAGATCATTTCTTCCTCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: TNLQSKNDRPTCKLW*FGHEYWQIISSSSS
Trigger: AGAAGAAGAGGAAGAAATGATCTGCCAGTACTCATGTCCGAACAACCAGAGTTTGCATGTCGGTCGGTCATTCTTTGACTGAAGATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CAA 72 bp TCTCACCCAGCACACAGACTGAATAGCTTGGTACACTaGCTTCCCAGGTGTAAAACTACCTGCTTAATAACA +
Preference number: 6 (lower is better)
Translates to: SHPAHRLNSLVH*LPRCKTTCLIT
Trigger: TGTTATTAAGCAGGTAGTTTTACACCTGGGAAGCAAGTGTACCAAGCTATTCAGTCTGTGTGCTGGGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CAA 72 bp AATGATGTATTAAGACACGCAGAGCCCTTACCCCATTaGCTACAGGAACCCAATTACATCGATTCCATAGCT +
Preference number: 6 (lower is better)
Translates to: NDVLRHAEPLPH*LQEPNYIDSIA
Trigger: AGCTATGGAATCGATGTAATTGGGTTCCTGTAGCAAATGGGGTAAGGGCTCTGCGTGTCTTAATACATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644139.1
CDS CAA 90 bp ACAACATTTTCTCACCCAGCACACAGACTGAATAGCTTGGTACACTaGCTTCCCAGGTGTAAAACTACCTGCTTAATAACAATGCCTTCT +
Preference number: 6 (lower is better)
Translates to: TTFSHPAHRLNSLVH*LPRCKTTCLITMPS
Trigger: AGAAGGCATTGTTATTAAGCAGGTAGTTTTACACCTGGGAAGCAAGTGTACCAAGCTATTCAGTCTGTGTGCTGGGTGAGAAAATGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644139.1