RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD10 (Homo sapiens)

Ensembl gene IDs: ENSG00000088448

Ensembl transcript IDs: ENST00000267339.6, ENST00000310847.8, ENST00000460846.1, ENST00000463156.1, ENST00000465753.1, ENST00000475809.1, ENST00000485844.1, ENST00000489973.6, ENST00000494859.5, ENST00000603993.1

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAACTGGGCACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTGCTaGTGTCAGGCCACTGGCATTTCTCAGGCTCAACAGTATGCCTCG +
Preference number: 1 (lower is better)
Translates to: KLGTLLETLGLCNVC*CQATGISQAQQYAS
Trigger: CGAGGCATACTGTTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR GCA 90 bp GAGAAACTGGGCACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTaGTGCTGTCAGGCCACTGGCATTTCTCAGGCTCAACAGTATGCC +
Preference number: 1 (lower is better)
Translates to: EKLGTLLETLGLCNV*CCQATGISQAQQYA
Trigger: GGCATACTGTTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR CCA 90 bp AGTTGTGACATTCGTTCAAGTTGCTGCTACATGGGTATTCTGAGCTaGCTACCAGGAAGGACTCCTGCGTTTCCGAGAGCCAGGTCAGCG +
Preference number: 1 (lower is better)
Translates to: SCDIRSSCCYMGILS*LPGRTPAFPRARSA
Trigger: CGCTGACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCATGTAGCAGCAACTTGAACGAATGTCACAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR TCA 90 bp CTCCACCGTCACCGCACAATCCACCAGGCGCATTACCACCTGAAGTaGAGGTCTCATCTCGAAGGTGCGCTCAGCCATAAAAAGAAAACA +
Preference number: 1 (lower is better)
Translates to: LHRHRTIHQAHYHLK*RSHLEGALSHKKKT
Trigger: TGTTTTCTTTTTATGGCTGAGCGCACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCTGGTGGATTGTGCGGTGACGGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310847.8
3UTR TCA 90 bp GAAATCTCCACCGTCACCGCACAATCCACCAGGCGCATTACCACCTaGAGTGAAGGTCTCATCTCGAAGGTGCGCTCAGCCATAAAAAGA +
Preference number: 1 (lower is better)
Translates to: EISTVTAQSTRRITT*SEGLISKVRSAIKR
Trigger: TCTTTTTATGGCTGAGCGCACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCTGGTGGATTGTGCGGTGACGGTGGAGATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
3UTR GCA 90 bp GAGGTTCAAGAGAAACTGGGCACACTCTTGGAAACCCTGGGTTTGTaGAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTCAGGCTCAA +
Preference number: 1 (lower is better)
Translates to: EVQEKLGTLLETLGL*NVCCCQATGISQAQ
Trigger: TTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR TCA 90 bp GTACAAGTTGTGACATTCGTTCAAGTTGCTGCTACATGGGTATTCTaGGCTGGCTACCAGGAAGGACTCCTGCGTTTCCGAGAGCCAGGT +
Preference number: 1 (lower is better)
Translates to: VQVVTFVQVAATWVF*AGYQEGLLRFREPG
Trigger: ACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCATGTAGCAGCAACTTGAACGAATGTCACAACTTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR GCA 90 bp ACAGTATGCCTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAATaGCACAACTGTAAGGTTTTCGGAGAAGCACCTGTGGCAGTTTCA +
Preference number: 1 (lower is better)
Translates to: TVCLVCRKEAILNIQ*HNCKVFGEAPVAVS
Trigger: TGAAACTGCCACAGGTGCTTCTCCGAAAACCTTACAGTTGTGGCATTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR TCA 90 bp AGCGGTCTCACCTTCAGTTCTAGCTTTCTTTACTCCAAAGTCTTCTaGGTCTTCCAAGCATCTCTTTCGATTTGTTCCCACACTAATATG +
Preference number: 1 (lower is better)
Translates to: SGLTFSSSFLYSKVF*VFQASLSICSHTNM
Trigger: CATATTAGTGTGGGAACAAATCGAAAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGGTGAGACCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000465753.1
3UTR GCA 90 bp ACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATaGACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTTTACTTTTT +
Preference number: 1 (lower is better)
Translates to: TPHCRNIYALSKPYS*TNKQLLGTCRSLLF
Trigger: AAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR GCA 90 bp ACATCTATGCACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTaGTGGGAACTTGTCGAAGTTTACTTTTTCAGAAAGTTGAAGTAT +
Preference number: 1 (lower is better)
Translates to: TSMHLVSPTHAQTSS*WELVEVYFFRKLKY
Trigger: ATACTTCAACTTTCTGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR CCA 90 bp TCTATGCACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTaGGAACTTGTCGAAGTTTACTTTTTCAGAAAGTTGAAGTATATA +
Preference number: 1 (lower is better)
Translates to: SMHLVSPTHAQTSSC*ELVEVYFFRKLKYI
Trigger: TATATACTTCAACTTTCTGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGCATAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR CAA 90 bp GTTCAGATGACAATTCTGGAGGTTCAAGAGAAACTGGGCACACTCTaGGAAACCCTGGGTTTGTGCAATGTCTGCTGCTGTCAGGCCACT +
Preference number: 2 (lower is better)
Translates to: VQMTILEVQEKLGTL*ETLGLCNVCCCQAT
Trigger: AGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR-3UTR GCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAACCAGGAAGGACTCCTaGGTTTCCGAGAGCCAGGTC +
Preference number: 2 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQTRKDS*VSESQV
Trigger: GACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGT...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR-3UTR GCA 90 bp GGTTCAGATGACAATTCTGGAGGTTCAAGAGAAACTGGGCACACTCTTGGAAACTTGTGCAATGTCTGCTaGTGTCAGGCCACTGGCATT +
Preference number: 2 (lower is better)
Translates to: GSDDNSGGSRETGHTLGNLCNVC*CQATGI
Trigger: AATGCCAGTGGCCTGACAGCAGCAGACATTGCACAA...GTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR-3UTR TCA 90 bp GTGCTCAAAAAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCAGGCGCATTACCACCTaGAGTGAAGGTCTCATCTCG +
Preference number: 2 (lower is better)
Translates to: VLKKFHIDIYTWAISISLRRITT*SEGLIS
Trigger: CGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCT...GAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTTTTTGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
3UTR-3UTR GCA 90 bp TGCAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTCAGGCTCAACAGTATGCCATACTGAACATTCAATaGCACAACTGTAAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: CNVCCCQATGISQAQQYAILNIQ*HNCKVF
Trigger: GAAAACCTTACAGTTGTGGCATTGAATGTTCAGTAT...GGCATACTGTTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR-3UTR CCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTATGGGTATTCTGAGCTaGCTACCAGGAAGGACTCCT +
Preference number: 2 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFMGILS*LPGRTP
Trigger: AGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCAT...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR-3UTR TCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAAAAACGTACAAGTTGTaGCATTCGTTCAAGTTGCTG +
Preference number: 2 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEKTYKL*HSFKLL
Trigger: CAGCAACTTGAACGAATGTCACAACTTGTACGTTTT...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR-3UTR GCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAATTCGTTCAAGTTGCTaGTACATGGGTATTCTGAGC +
Preference number: 2 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQIRSSC*YMGILS
Trigger: GCTCAGAATACCCATGTAGCAGCAACTTGAACGAAT...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR-3UTR GCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAGACATTCGTTCAAGTTaGTGCTACATGGGTATTCTG +
Preference number: 2 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQDIRSS*CYMGIL
Trigger: CAGAATACCCATGTAGCAGCAACTTGAACGAATGTC...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR-3UTR GCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTGCACAAACAAGCAGTTaGTGGGAACTTGTCGAAGTT +
Preference number: 2 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFAQTSS*WELVEV
Trigger: AACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGC...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR-3UTR TCA 90 bp GTGCTCAAAAAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCTACTCCAAAGTCTTCTaGGTCTTCCAAGCATCTCTT +
Preference number: 2 (lower is better)
Translates to: VLKKFHIDIYTWAISISLYSKVF*VFQASL
Trigger: AAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTA...GAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTTTTTGAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
3UTR-3UTR TCA 90 bp AAATCTAATTCATGGCAGGTAAACATGGGTGCTCAAAAAGTTCCACATAGACATCATTACCACCTGAAGTaGAGGTCTCATCTCGAAGGT +
Preference number: 2 (lower is better)
Translates to: KSNSWQVNMGAQKVPHRHHYHLK*RSHLEG
Trigger: ACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATG...ATGTCTATGTGGAACTTTTTGAGCACCCATGTTTACCTGCCATGAATTAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
3UTR-3UTR GCA 90 bp TCTGATGACCCCCATTTAAGATGCCATTGTTATAGAAATGGTTCAGATGACAATACAGTATGCCTCGTGTaGAGAAAGGAAGCGATACTG +
Preference number: 2 (lower is better)
Translates to: SDDPHLRCHCYRNGSDDNTVCLV*RKEAIL
Trigger: CAGTATCGCTTCCTTTCTGCACACGAGGCATACTGT...ATTGTCATCTGAACCATTTCTATAACAATGGCATCTTAAATGGGGGTCATCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR-3UTR CCA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAACAAACAAGCAGTTGCTaGGAACTTGTCGAAGTTTAC +
Preference number: 2 (lower is better)
Translates to: TLHREIAVFRQILQKRVEQTSSC*ELVEVY
Trigger: GTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTG...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR CAA 90 bp AACATCTATGCACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTaGCTGGGAACTTGTCGAAGTTTACTTTTTCAGAAAGTTGAAGTA +
Preference number: 2 (lower is better)
Translates to: NIYALSKPYSCTNKQ*LGTCRSLLFQKVEV
Trigger: TACTTCAACTTTCTGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR TCA 72 bp ACCGTCACCGCACAATCCACCAGGCGCATTACCACCTaGAGTGAAGGTCTCATCTCGAAGGTGCGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: TVTAQSTRRITT*SEGLISKVRSA
Trigger: GGCTGAGCGCACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCTGGTGGATTGTGCGGTGACGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
3UTR TCA 72 bp CACCGCACAATCCACCAGGCGCATTACCACCTGAAGTaGAGGTCTCATCTCGAAGGTGCGCTCAGCCATAAA +
Preference number: 3 (lower is better)
Translates to: HRTIHQAHYHLK*RSHLEGALSHK
Trigger: TTTATGGCTGAGCGCACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCTGGTGGATTGTGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
3UTR GCA 72 bp GGCACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTaGTGCTGTCAGGCCACTGGCATTTCTCAGGCTCAA +
Preference number: 3 (lower is better)
Translates to: GTLLETLGLCNV*CCQATGISQAQ
Trigger: TTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR GCA 72 bp ACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTGCTaGTGTCAGGCCACTGGCATTTCTCAGGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: TLLETLGLCNVC*CQATGISQAQQ
Trigger: CTGTTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR CCA 72 bp ATTCGTTCAAGTTGCTGCTACATGGGTATTCTGAGCTaGCTACCAGGAAGGACTCCTGCGTTTCCGAGAGCC +
Preference number: 3 (lower is better)
Translates to: IRSSCCYMGILS*LPGRTPAFPRA
Trigger: GGCTCTCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCATGTAGCAGCAACTTGAACGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR GCA 72 bp CACTGGCATTTCTCAGGCTCAACAGTATGCCTCGTGTaGAGAAAGGAAGCGATACTGAACATTCAATGCCAC +
Preference number: 3 (lower is better)
Translates to: HWHFSGSTVCLV*RKEAILNIQCH
Trigger: GTGGCATTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGTTGAGCCTGAGAAATGCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR GCA 72 bp CTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAATaGCACAACTGTAAGGTTTTCGGAGAAGCACCTGTG +
Preference number: 3 (lower is better)
Translates to: LVCRKEAILNIQ*HNCKVFGEAPV
Trigger: CACAGGTGCTTCTCCGAAAACCTTACAGTTGTGGCATTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR GCA 72 bp TGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATaGACAAACAAGCAGTTGCTGGGAACTTGTCGAAGT +
Preference number: 3 (lower is better)
Translates to: CRNIYALSKPYS*TNKQLLGTCRS
Trigger: ACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR TCA 72 bp ACCTTCAGTTCTAGCTTTCTTTACTCCAAAGTCTTCTaGGTCTTCCAAGCATCTCTTTCGATTTGTTCCCAC +
Preference number: 3 (lower is better)
Translates to: TFSSSFLYSKVF*VFQASLSICSH
Trigger: GTGGGAACAAATCGAAAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000465753.1
3UTR GCA 72 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTaGTGGGAACTTGTCGAAGTTTACTTTTTCAGAAAG +
Preference number: 3 (lower is better)
Translates to: HLVSPTHAQTSS*WELVEVYFFRK
Trigger: CTTTCTGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR-3UTR CAA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAAGCAGTTGCTGGGAACTaGTCGAAGTTTACTTTTTCA +
Preference number: 3 (lower is better)
Translates to: TLHREIAVFRQILQKRVEAVAGN*SKFTFS
Trigger: TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGC...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR CCA 72 bp TTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTaGGAACTTGTCGAAGTTTACTTTTTCAGAAAGTTG +
Preference number: 3 (lower is better)
Translates to: LVSPTHAQTSSC*ELVEVYFFRKL
Trigger: CAACTTTCTGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
3UTR-3UTR CAA 90 bp ACCACATTTACTAGTTTCTCAGTGTTTACTGCTAGTCGTCCTCTTTGTGGTATATACCCAAAACACTTCTaGTATCTACAAACTTGCCCA +
Preference number: 3 (lower is better)
Translates to: TTFTSFSVFTASRPLCGIYPKHF*YLQTCP
Trigger: TGGGCAAGTTTGTAGATACAAGAAGTGTTTTGGGTA...TATACCACAAAGAGGACGACTAGCAGTAAACACTGAGAAACTAGTAAATGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603993.1
3UTR TCA 72 bp GATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTaGTTTACCACCCCAATTTATCTTGATCATATAATC +
Preference number: 3 (lower is better)
Translates to: DAHVQRDKLPGT*FTTPIYLDHII
Trigger: GATTATATGATCAAGATAAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp TCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGCACAATCCACCAGGCGGCAGCGAGCAGAGCGTaGCCAGGTCCCCGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: SQWQYRRNLHRHRTIHQAAASRA*PGPRRG
Trigger: GCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGC...CGCCTGGTGGATTGTGCGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp CCACCAGGCGCATTACCACCTGAAGTGAAGGTCTCATCTCGAAGGTGCGCTCAGGAGGCCAGGTGGGCGTaGGGTGTCTGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPGALPPEVKVSSRRCAQEARWA*GVCCSS
Trigger: GCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTC...CTGAGCGCACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp TTGTTAAGTCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGGAGCGCGGGGCTCGCTaGCCTAGAGGACGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: LLSPIFAVAVQEKSPPSPERGAR*PRGRVG
Trigger: CCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTC...CGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp ACCCTGGGTTTGTGCAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTCAGGCTGAGGCCAGGTGGGCGTaGGGTGTCTGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLGLCNVCCCQATGISQAEARWA*GVCCSS
Trigger: GCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTC...AGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp CCAGGCGCATTACCACCTGAAGTGAAGGTCTCATCTCGAAGGTGCGCTCAGCCATCCAACTTGCCGAAATaGGCGGCCCAGTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: PGALPPEVKVSSRRCAQPSNLPK*AAQCTG
Trigger: GCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGA...TGGCTGAGCGCACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp TTGTTAAGTCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGCTCCCGCCGCCGACATaGTCCGTCACCGGAGAGCGC +
Preference number: 4 (lower is better)
Translates to: LLSPIFAVAVQEKSPPSPLPPPT*SVTGER
Trigger: GCGCTCTCCGGTGACGGACCATGTCGGCGGCGGGAG...CGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp TCTGCTGCTGTCAGGCCACTGGCATTTCTCAGGCTCAACAGTATGCCTCGTGTGTCCTCAGAGGCCAGGTaGGCGTGGGGTGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAAVRPLAFLRLNSMPRVSSEAR*AWGVCC
Trigger: GCAGCAGACACCCCACGCCCACCTGGCCTCTGAGGA...CACACGAGGCATACTGTTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp CCACCAGGCGCATTACCACCTGAAGTGAAGGTCTCATCTCGAAGGTGCGCTCAGGGCTGCAATGTGGGCTaGCGTCTGCGCGTACCGTGT +
Preference number: 4 (lower is better)
Translates to: PPGALPPEVKVSSRRCAQGCNVG*RLRVPC
Trigger: ACACGGTACGCGCAGACGCCAGCCCACATTGCAGCC...CTGAGCGCACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp TCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGCACAATCCACCAGGCGCCAAAGGCTGCAATGTaGGCTGGCGTCTGCGCGTAC +
Preference number: 4 (lower is better)
Translates to: SQWQYRRNLHRHRTIHQAPKAAM*AGVCAY
Trigger: GTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGG...CGCCTGGTGGATTGTGCGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp TCCCTTTTGTTAAGTCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCGCGGCAGGCGCGGTaGAGCGGGAAACGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: SLLLSPIFAVAVQEKSPPSRQAR*SGKRSE
Trigger: CTCGCTCCGTTTCCCGCTGCACCGCGCCTGCCGCGA...CGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAAAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp TTTGTGCAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTCAGGCTCAACAGTATCGCGGCAGGCGCGGTaGAGCGGGAAACGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: FVQCLLLSGHWHFSGSTVSRQAR*SGKRSE
Trigger: CTCGCTCCGTTTCCCGCTGCACCGCGCCTGCCGCGA...TACTGTTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp CAATGCCACAACTGTAAGGTTTTCGGAGAAGCACCTGTGGCAGTTTCAGCAGTTGCAGCGAGCAGAGCGTaGCCAGGTCCCCGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: QCHNCKVFGEAPVAVSAVAASRA*PGPRRG
Trigger: GCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGC...AACTGCTGAAACTGCCACAGGTGCTTCTCCGAAAACCTTACAGTTGTGGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp TCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGCACAATCCACCAGGCGGGTTTGTGCAATGTCTaGTGCTGTCAGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: SQWQYRRNLHRHRTIHQAGLCNV*CCQATG
Trigger: GCCAGTGGCCTGACAGCAGCAGACATTGCACAAACC...CGCCTGGTGGATTGTGCGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp GAAACTGGGCACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTGCTGCTGTCATCCAACTTGCCGAAATaGGCGGCCCAGTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: ETGHTLGNPGFVQCLLLSSNLPK*AAQCTG
Trigger: GCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGA...TGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp TTGGAAACCCTGGGTTTGTGCAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTATGTGGGCTGGCGTCTaGGCGTACCGTGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LETLGLCNVCCCQATGISMWAGV*AYRVVE
Trigger: CTCCACCACACGGTACGCGCAGACGCCAGCCCACAT...AGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAGAGCGCGGGGCTCGCTaGCCTAGAGGACGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQERGAR*PRGRVG
Trigger: CCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTC...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp GAAACTGGGCACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTGCTGCTGTCAAGAGCAGCTCCTCGCTaGAGAAGCCCGCCTCTACGC +
Preference number: 4 (lower is better)
Translates to: ETGHTLGNPGFVQCLLLSRAAPR*RSPPLR
Trigger: GCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCT...TGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR TCA 90 bp TTGTTAAGTCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGAGCCAGACCAGGCACTaGGGATGTCCCCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LLSPIFAVAVQEKSPPSPSQTRH*GCPPKA
Trigger: AGCCTTTGGGGGACATCCTCAGTGCCTGGTCTGGCT...CGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp AAAGGAAAAATAAGTGTGCTCTTCCCACCCGCAAAGCGGTCTCACCTTCAGTTCTGGGCGTGGGGTGTCTaGTGCAGCAGCGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: KGKISVLFPPAKRSHLQFWAWGV*CSSEQS
Trigger: GCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCA...GAACTGAAGGTGAGACCGCTTTGCGGGTGGGAAGAGCACACTTATTTTTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000465753.1
CDS-3UTR TCA 90 bp TGCAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTCAGGCTCAACAGTATGCCGAGCGAGCTGCCTTGTaGATGGGAGTTTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: CNVCCCQATGISQAQQYAERAAL*MGVSPS
Trigger: TGAGGGTGAAACTCCCATTCACAAGGCAGCTCGCTC...GGCATACTGTTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTTCGCGGCAGGCGCGGTaGAGCGGGAAACGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFSRQAR*SGKRSE
Trigger: CTCGCTCCGTTTCCCGCTGCACCGCGCCTGCCGCGA...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAATGGGCGTGGGGTGTCTaGTGCAGCAGCGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEWAWGV*CSSEQS
Trigger: GCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCA...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp CTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTTTACTTTTTCAGCAGCGAGCAGAGCGTaGCCAGGTCCCCGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: LLMHKQAVAGNLSKFTFSAASRA*PGPRRG
Trigger: GCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGC...TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp CCACCAGGCGCATTACCACCTGAAGTGAAGGTCTCATCTCGAAGGTGCGCTCAGAACTGGGCACACTCTTaGAAACCCTGGGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PPGALPPEVKVSSRRCAQNWAHS*KPWVCA
Trigger: TGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTT...CTGAGCGCACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR TCA 90 bp CTCAGGCTCAACAGTATGCCTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAGTGTGGTGGAGACGTTaGGTGTGGCTCCCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LRLNSMPRVQKGSDTEHSVWWRR*VWLPLS
Trigger: TGAGAGCGGGAGCCACACTCAACGTCTCCACCACAC...TGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGTTGAGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR TCA 90 bp CCAGGCGCATTACCACCTGAAGTGAAGGTCTCATCTCGAAGGTGCGCTCAGCCACATTACCACCTGAAGTaGAGGTCTCATCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: PGALPPEVKVSSRRCAQPHYHLK*RSHLEG
Trigger: ACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATG...TGGCTGAGCGCACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAGCGTGGGGTGTCTGCTaGAGCAGCGAGCAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQAWGVC*SSEQSV
Trigger: CACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGC...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAATGTGGGCTGGCGTCTaGGCGTACCGTGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEMWAGV*AYRVVE
Trigger: CTCCACCACACGGTACGCGCAGACGCCAGCCCACAT...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp AATAAGTGTGCTCTTCCCACCCGCAAAGCGGTCTCACCTTCAGTTCTAGCTTTCATGTCCCCCAAAGGCTaGAATGTGGGCTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: NKCALPTRKAVSPSVLAFMSPKG*NVGWRL
Trigger: CAGACGCCAGCCCACATTGCAGCCTTTGGGGGACAT...GAAAGCTAGAACTGAAGGTGAGACCGCTTTGCGGGTGGGAAGAGCACACTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000465753.1
CDS-3UTR GCA 90 bp TTGGAAACCCTGGGTTTGTGCAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTGGTTTGTGCAATGTCTaGTGCTGTCAGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LETLGLCNVCCCQATGISGLCNV*CCQATG
Trigger: GCCAGTGGCCTGACAGCAGCAGACATTGCACAAACC...AGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp CATTGTTATAGAAATGGTTCAGATGACAATTCTGGAGGTTCAAGAGAAACTGGGGAGCGCGGGGCTCGCTaGCCTAGAGGACGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: HCYRNGSDDNSGGSRETGERGAR*PRGRVG
Trigger: CCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTC...CCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATAACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp CTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTTTACTTTTTCACTCCCGCCGCCGACATaGTCCGTCACCGGAGAGCGC +
Preference number: 4 (lower is better)
Translates to: LLMHKQAVAGNLSKFTFSLPPPT*SVTGER
Trigger: GCGCTCTCCGGTGACGGACCATGTCGGCGGCGGGAG...TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTGAGGCCAGGTGGGCGTaGGGTGTCTGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFEARWA*GVCCSS
Trigger: GCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTC...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp ACCCTGGGTTTGTGCAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTCAGGCTAACTGGGCACACTCTTaGAAACCCTGGGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: TLGLCNVCCCQATGISQANWAHS*KPWVCA
Trigger: TGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTT...AGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAACGTGGTGCAGGTGCATaGTGCCCAGCACGGCACTGT +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVERGAGA*CPARHC
Trigger: ACAGTGCCGTGCTGGGCACCATGCACCTGCACCACG...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp CTCAGGCTCAACAGTATGCCTCGTGTGCAGAAAGGAAGCGATACTGAACATTCATCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LRLNSMPRVQKGSDTEHSSPQGH*CILGSQ
Trigger: CTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGA...TGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGTTGAGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp GCTCAAAAAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCACGCGTGGGGTGTCTGCTaGAGCAGCGAGCAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: AQKVPHRHLHLGHQYFPHAWGVC*SSEQSV
Trigger: CACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGC...GTGAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTTTTTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp AAAGGAAAAATAAGTGTGCTCTTCCCACCCGCAAAGCGGTCTCACCTTCAGTTCATGTCCCCCAAAGGCTaGAATGTGGGCTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: KGKISVLFPPAKRSHLQFMSPKG*NVGWRL
Trigger: CAGACGCCAGCCCACATTGCAGCCTTTGGGGGACAT...GAACTGAAGGTGAGACCGCTTTGCGGGTGGGAAGAGCACACTTATTTTTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000465753.1
CDS-3UTR GCA 90 bp TTTGTTAAGTCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGCTCCCAGAGCGAGCTaGCTTGTGAATGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FVKSHLRSGSTGEISTVTAPRAS*LVNGSF
Trigger: GAAACTCCCATTCACAAGGCAGCTCGCTCTGGGAGC...GGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp CTTGGAAACCCTGGGTTTGTGCAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTTGTGCAATGTCTGCTaGTGTCAGGCCACTGGCATT +
Preference number: 4 (lower is better)
Translates to: LGNPGFVQCLLLSGHWHFLCNVC*CQATGI
Trigger: AATGCCAGTGGCCTGACAGCAGCAGACATTGCACAA...GAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAGGCTGCAATGTGGGCTaGCGTCTGCGCGTACCGTGT +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQGCNVG*RLRVPC
Trigger: ACACGGTACGCGCAGACGCCAGCCCACATTGCAGCC...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp ATACTGAACATTCAATGCCACAACTGTAAGGTTTTCGGAGAAGCACCTGTGGCAGGCTGCAATGTGGGCTaGCGTCTGCGCGTACCGTGT +
Preference number: 4 (lower is better)
Translates to: ILNIQCHNCKVFGEAPVAGCNVG*RLRVPC
Trigger: ACACGGTACGCGCAGACGCCAGCCCACATTGCAGCC...TGCCACAGGTGCTTCTCCGAAAACCTTACAGTTGTGGCATTGAATGTTCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp TCAGGCTCAACAGTATGCCTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAACCAAAGGCTGCAATGTaGGCTGGCGTCTGCGCGTAC +
Preference number: 4 (lower is better)
Translates to: SGSTVCLVCRKEAILNIQPKAAM*AGVCAY
Trigger: GTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGG...TTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGTTGAGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR TCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAGTGTGGTGGAGACGTTaGGTGTGGCTCCCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQVWWRR*VWLPLS
Trigger: TGAGAGCGGGAGCCACACTCAACGTCTCCACCACAC...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp AAAGGAAAAATAAGTGTGCTCTTCCCACCCGCAAAGCGGTCTCACCTTCAGTTCATGTTGGCTCCTGCTTaGATCAGCCAGACCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KGKISVLFPPAKRSHLQFMLAPA*ISQTRH
Trigger: GTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACAT...GAACTGAAGGTGAGACCGCTTTGCGGGTGGGAAGAGCACACTTATTTTTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000465753.1
CDS-3UTR TCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAATTTCTCAGGTCGACGTaGGCCCCATTCGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEFLRST*APFATR
Trigger: CCTTGTGGCGAATGGGGCTCACGTCGACCTGAGAAA...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp TCCCTTTTGTTAAGTCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGAGGCGCATTACCACCTaGAGTGAAGGTCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: SLLLSPIFAVAVQEKSPPRRITT*SEGLIS
Trigger: CGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCT...CGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR TCA 90 bp CAATGCCACAACTGTAAGGTTTTCGGAGAAGCACCTGTGGCAGTTTCAGCAGTTCTAGGATTATCGACGTaGGCCCCATTCGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: QCHNCKVFGEAPVAVSAVLGLST*APFATR
Trigger: CCTTGTGGCGAATGGGGCTCACGTCGATAATCCTAG...AACTGCTGAAACTGCCACAGGTGCTTCTCCGAAAACCTTACAGTTGTGGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp CTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTTTACTTTTTCATCCTCAGAGGCCAGGTaGGCGTGGGGTGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLMHKQAVAGNLSKFTFSSSEAR*AWGVCC
Trigger: GCAGCAGACACCCCACGCCCACCTGGCCTCTGAGGA...TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp TTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCACATTCCCTTTTTCCTCAGAGGCCAGGTaGGCGTGGGGTGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FHIDIYTWAISISLTFPFSSEAR*AWGVCC
Trigger: GCAGCAGACACCCCACGCCCACCTGGCCTCTGAGGA...AAAAGGGAATGTGAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAACCAAAGGCTGCAATGTaGGCTGGCGTCTGCGCGTAC +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQPKAAM*AGVCAY
Trigger: GTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGG...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp GTGCAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTCAGGCTCAACAGTATGCGAGCTGCCTTGTGAATaGGAGTTTCACCCTCACAAT +
Preference number: 4 (lower is better)
Translates to: VQCLLLSGHWHFSGSTVCELPCE*EFHPHN
Trigger: ATTGTGAGGGTGAAACTCCCATTCACAAGGCAGCTC...GCATACTGTTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp TTGTTAAGTCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGGTCCCATCTTCGCAGTaGCAGTACAGGAGAAATCTC +
Preference number: 4 (lower is better)
Translates to: LLSPIFAVAVQEKSPPSPVPSSQ*QYRRNL
Trigger: GAGATTTCTCCTGTACTGCCACTGCGAAGATGGGAC...CGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR TCA 90 bp AAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCACATTCCCTGTGTGGTGGAGACGTTaGGTGTGGCTCCCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: KFHIDIYTWAISISLTFPVWWRR*VWLPLS
Trigger: TGAGAGCGGGAGCCACACTCAACGTCTCCACCACAC...AGGGAATGTGAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR TCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTAGCCAGACCAGGCACTaGGGATGTCCCCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFSQTRH*GCPPKA
Trigger: AGCCTTTGGGGGACATCCTCAGTGCCTGGTCTGGCT...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp CTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTTTACTTTTTCATGCTTTCCATCCCACTaGGCGGGGTCGTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LLMHKQAVAGNLSKFTFSCFPSH*AGSWRG
Trigger: TCCCCTCCACGACCCCGCTCAGTGGGATGGAAAGCA...TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp CCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGCACAATCCACAAAGTAACTCCATGTTaGAGTTCCCCTGGAAGACAA +
Preference number: 4 (lower is better)
Translates to: PSSQWQYRRNLHRHRTIHKVTPC*SSPGRQ
Trigger: TTGTCTTCCAGGGGAACTTCAACATGGAGTTACTTT...GTGGATTGTGCGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR TCA 90 bp ACCCTGGGTTTGTGCAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTCAGGCTGAAAGGAAGCGATACTaGACATTCAATGCCACAACT +
Preference number: 4 (lower is better)
Translates to: TLGLCNVCCCQATGISQAERKRY*TFNATT
Trigger: AGTTGTGGCATTGAATGTTCAGTATCGCTTCCTTTC...AGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAATCCAACTTGCCGAAATaGGCGGCCCAGTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: TLHREIAVFRQILQKRVESNLPK*AAQCTG
Trigger: GCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGA...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAACTAAGCACTCCAACTTaGCGAAATGCGCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVELSTPT*RNARPS
Trigger: ACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAG...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp GGCTCAACAGTATGCCTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAATGCCCCGCTCTCACCAACTaGACTAAGCACTCCAACTTG +
Preference number: 4 (lower is better)
Translates to: GSTVCLVCRKEAILNIQCPALTN*TKHSNL
Trigger: CAAGTTGGAGTGCTTAGTGCAGTTGGTGAGAGCGGG...GCATTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGTTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGGACTCCCGTTCAGGTaGAGAGAACCGCACAACTCA +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEGLPFR*REPHNS
Trigger: TGAGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCC...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAACTGTCGTACCGCTCCTaGACCTTCACGGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVELSYRS*TFTDLE
Trigger: TTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAG...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp CTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTTTACTTTTTCAGGTGCAGGTGCATGGTaGCCAGCACGGCACTGTCGT +
Preference number: 4 (lower is better)
Translates to: LLMHKQAVAGNLSKFTFSGAGAW*PARHCR
Trigger: ACGACAGTGCCGTGCTGGGCACCATGCACCTGCACC...TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAAAGAGCAGCTCCTCGCTaGAGAAGCCCGCCTCTACGC +
Preference number: 4 (lower is better)
Translates to: TLHREIAVFRQILQKRVERAAPR*RSPPLR
Trigger: GCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCT...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp ATGGGTGCTCAAAAAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCAGAGCAGCTCCTCGCTaGAGAAGCCCGCCTCTACGC +
Preference number: 4 (lower is better)
Translates to: MGAQKVPHRHLHLGHQYFRAAPR*RSPPLR
Trigger: GCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCT...GAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTTTTTGAGCACCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp TTGTTAAGTCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGGAGCTGCCTTGTGAATaGGAGTTTCACCCTCACAAT +
Preference number: 4 (lower is better)
Translates to: LLSPIFAVAVQEKSPPSPELPCE*EFHPHN
Trigger: ATTGTGAGGGTGAAACTCCCATTCACAAGGCAGCTC...CGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAACTGCTGTCAGGCCACTaGCATTTCTCAGGTCGACGT +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVELLSGH*HFSGRR
Trigger: ACGTCGACCTGAGAAATGCCAGTGGCCTGACAGCAG...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTCGCCATTCGTGAGTaGCACGGCAGAATCCAAGCT +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEVAIRE*HGRIQA
Trigger: AGCTTGGATTCTGCCGTGCCACTCACGAATGGCGAC...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAATGTTGGCTCCTGCTTaGATCAGCCAGACCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQMLAPA*ISQTRH
Trigger: GTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACAT...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp CCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGCACAATCCACTCAGGCTTTAGACACTaGATTAAAACTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: PSSQWQYRRNLHRHRTIHSGFRH*IKTEGS
Trigger: TGATCCCTCAGTTTTAATTCAGTGTCTAAAGCCTGA...GTGGATTGTGCGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp TCTGATGACCCCCATTTAAGATGCCATTGTTATAGAAATGGTTCAGATGACAATTGGGCGTGGGGTGTCTaGTGCAGCAGCGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SDDPHLRCHCYRNGSDDNWAWGV*CSSEQS
Trigger: GCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCA...ATTGTCATCTGAACCATTTCTATAACAATGGCATCTTAAATGGGGGTCATCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTATGTCCCCCAAAGGCTaGAATGTGGGCTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFMSPKG*NVGWRL
Trigger: CAGACGCCAGCCCACATTGCAGCCTTTGGGGGACAT...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAGGTTTGTGCAATGTCTaGTGCTGTCAGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQGLCNV*CCQATG
Trigger: GCCAGTGGCCTGACAGCAGCAGACATTGCACAAACC...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAAAGGCCTACTGGCTATaGAGCTACTTGGACTCCCGT +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEKAYWL*SYLDSR
Trigger: ACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTT...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp TCCCTTTTGTTAAGTCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGCACTCTTGGAAACCCTaGGTTTGTGCAATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLLLSPIFAVAVQEKSPPHSWKP*VCAMSA
Trigger: AGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTG...CGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp TCCCTTTTGTTAAGTCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGAGGTTCAAGAGAAACTaGGCACACTCTTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: SLLLSPIFAVAVQEKSPPRFKRN*AHSWKP
Trigger: GGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCT...CGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGCACCTTCACGGACTTaGAATGCTCGACCACACTGT +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEAPSRT*NARPHC
Trigger: ACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGC...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp TCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGCACAATCCATGTTGAAGTTCCCCTaGAAGACAAGAATGTACACT +
Preference number: 4 (lower is better)
Translates to: SHLRSGSTGEISTVTAQSMLKFP*KTRMYT
Trigger: AGTGTACATTCTTGTCTTCCAGGGGAACTTCAACAT...GGATTGTGCGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR TCA 90 bp GCTCAAAAAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCACATGTTGGCTCCTGCTTaGATCAGCCAGACCAGGCAC +
Preference number: 4 (lower is better)
Translates to: AQKVPHRHLHLGHQYFPHMLAPA*ISQTRH
Trigger: GTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACAT...GTGAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTTTTTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR TCA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAATCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TLHREIAVFRQILQKRVESPQGH*CILGSQ
Trigger: CTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGA...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAACTGTGTCGCCATTCGTaGGTGGCACGGCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: TLHREIAVFRQILQKRVELCRHS*VARQNP
Trigger: TGGATTCTGCCGTGCCACTCACGAATGGCGACACAG...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp AAATCTAATTCATGGCAGGTAAACATGGGTGCTCAAAAAGTTCCACATAGACATATGTGGGCTGGCGTCTaGGCGTACCGTGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KSNSWQVNMGAQKVPHRHMWAGV*AYRVVE
Trigger: CTCCACCACACGGTACGCGCAGACGCCAGCCCACAT...ATGTCTATGTGGAACTTTTTGAGCACCCATGTTTACCTGCCATGAATTAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp CTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTTTACTTTTTCAACCAGGAAGGACTCCTaGGTTTCCGAGAGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLMHKQAVAGNLSKFTFSTRKDS*VSESQV
Trigger: GACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGT...TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp GGCTCAACAGTATGCCTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAATGCAGGTTCAAGAGAAACTaGGCACACTCTTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: GSTVCLVCRKEAILNIQCRFKRN*AHSWKP
Trigger: GGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCT...GCATTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGTTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTGGCTATGCAGCTACTTaGACTCCCGTTCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFGYAAT*TPVQVQ
Trigger: CTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCC...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp CTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTTTACTTTTTCAGAGCGAGCTGCCTTGTaGATGGGAGTTTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: LLMHKQAVAGNLSKFTFSERAAL*MGVSPS
Trigger: TGAGGGTGAAACTCCCATTCACAAGGCAGCTCGCTC...TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp TTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCACATTCCCTTTTGAGCGAGCTGCCTTGTaGATGGGAGTTTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: FHIDIYTWAISISLTFPFERAAL*MGVSPS
Trigger: TGAGGGTGAAACTCCCATTCACAAGGCAGCTCGCTC...AAAAGGGAATGTGAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR TCA 90 bp ACCACATTTACTAGTTTCTCAGTGTTTACTGCTAGTCGTCCTCTTTGTGGTATACTGTGTCGCCATTCGTaGGTGGCACGGCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: TTFTSFSVFTASRPLCGILCRHS*VARQNP
Trigger: TGGATTCTGCCGTGCCACTCACGAATGGCGACACAG...TATACCACAAAGAGGACGACTAGCAGTAAACACTGAGAAACTAGTAAATGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR TCA 90 bp GTGCTCAAAAAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCGAAATAAACTCGACGTaGGCCCCATTCGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: VLKKFHIDIYTWAISISLEINST*APFATR
Trigger: CCTTGTGGCGAATGGGGCTCACGTCGAGTTTATTTC...GAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTTTTTGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp GTGCTCAAAAAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCCCCGCTCTCACCAACTaGACTAAGCACTCCAACTTG +
Preference number: 4 (lower is better)
Translates to: VLKKFHIDIYTWAISISLPALTN*TKHSNL
Trigger: CAAGTTGGAGTGCTTAGTGCAGTTGGTGAGAGCGGG...GAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTTTTTGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAAGCTCCCAGAGCGAGCTaGCTTGTGAATGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: TLHREIAVFRQILQKRVEAPRAS*LVNGSF
Trigger: GAAACTCCCATTCACAAGGCAGCTCGCTCTGGGAGC...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAATTGTGCAATGTCTGCTaGTGTCAGGCCACTGGCATT +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQLCNVC*CQATGI
Trigger: AATGCCAGTGGCCTGACAGCAGCAGACATTGCACAA...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAGAAACCCTGGGTTTGTaGAATGTCTGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQETLGL*NVCCCQ
Trigger: CTGACAGCAGCAGACATTGCACAAACCCAGGGTTTC...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp AGGCTCAACAGTATGCCTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAATGACAGTATGCCTCGTGTaGAGAAAGGAAGCGATACTG +
Preference number: 4 (lower is better)
Translates to: RLNSMPRVQKGSDTEHSMTVCLV*RKEAIL
Trigger: CAGTATCGCTTCCTTTCTGCACACGAGGCATACTGT...CATTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGTTGAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp TCAGGCTCAACAGTATGCCTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAATCAGGCTCAACAGTATaGCTCGTGTGCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SGSTVCLVCRKEAILNIQSGSTV*LVCRKE
Trigger: TTCCTTTCTGCACACGAGGCATACTGTTGAGCCTGA...TTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGTTGAGCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAACACTCTTGGAAACCCTaGGTTTGTGCAATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEHSWKP*VCAMSA
Trigger: AGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTG...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAAACTGGGCACACTCTTaGAAACCCTGGGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQNWAHS*KPWVCA
Trigger: TGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTT...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAAGGTTCAAGAGAAACTaGGCACACTCTTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVERFKRN*AHSWKP
Trigger: GGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCT...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp CTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTTTACTTTTTCACCCAGGAAGGCCTACTaGCTATGCAGCTACTTGGAC +
Preference number: 4 (lower is better)
Translates to: LLMHKQAVAGNLSKFTFSPRKAY*LCSYLD
Trigger: GTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGG...TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp TCGATTTGTTCCCACACTAATATGATTAGGAAATACATTCTGATGACCCCCATTTCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SICSHTNMIRKYILMTPISPQGH*CILGSQ
Trigger: CTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGA...AATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000465753.1
CDS-3UTR TCA 90 bp GGCTCAACAGTATGCCTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAATGCTACTCCAAAGTCTTCTaGGTCTTCCAAGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: GSTVCLVCRKEAILNIQCYSKVF*VFQASL
Trigger: AAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTA...GCATTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGTTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAACCCGCTCTCACCAACTaGACTAAGCACTCCAACTTG +
Preference number: 4 (lower is better)
Translates to: TLHREIAVFRQILQKRVEPALTN*TKHSNL
Trigger: CAAGTTGGAGTGCTTAGTGCAGTTGGTGAGAGCGGG...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp AAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCACATTCCCTTTGTGCAATGTCTGCTaGTGTCAGGCCACTGGCATT +
Preference number: 4 (lower is better)
Translates to: KFHIDIYTWAISISLTFPLCNVC*CQATGI
Trigger: AATGCCAGTGGCCTGACAGCAGCAGACATTGCACAA...AGGGAATGTGAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAGAGCTGCCTTGTGAATaGGAGTTTCACCCTCACAAT +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQELPCE*EFHPHN
Trigger: ATTGTGAGGGTGAAACTCCCATTCACAAGGCAGCTC...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAAATGCAGAGAGAACCCTaGCTACTCGGAAACGGCTGT +
Preference number: 4 (lower is better)
Translates to: TLHREIAVFRQILQKRVEMQREP*LLGNGC
Trigger: ACAGCCGTTTCCGAGTAGCCAGGGTTCTCTCTGCAT...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp AAATCTAATTCATGGCAGGTAAACATGGGTGCTCAAAAAGTTCCACATAGACATCTAAGCACTCCAACTTaGCGAAATGCGCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: KSNSWQVNMGAQKVPHRHLSTPT*RNARPS
Trigger: ACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAG...ATGTCTATGTGGAACTTTTTGAGCACCCATGTTTACCTGCCATGAATTAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp TGCCATTGTTATAGAAATGGTTCAGATGACAATTCTGGAGGTTCAAGAGAAACTCTAAGCACTCCAACTTaGCGAAATGCGCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: CHCYRNGSDDNSGGSRETLSTPT*RNARPS
Trigger: ACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAG...AGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATAACAATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp TCTGATGACCCCCATTTAAGATGCCATTGTTATAGAAATGGTTCAGATGACAATGCTCCCAGAGCGAGCTaGCTTGTGAATGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SDDPHLRCHCYRNGSDDNAPRAS*LVNGSF
Trigger: GAAACTCCCATTCACAAGGCAGCTCGCTCTGGGAGC...ATTGTCATCTGAACCATTTCTATAACAATGGCATCTTAAATGGGGGTCATCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp TTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCACATTCCCTTTTGAAACCCTGGGTTTGTaGAATGTCTGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: FHIDIYTWAISISLTFPFETLGL*NVCCCQ
Trigger: CTGACAGCAGCAGACATTGCACAAACCCAGGGTTTC...AAAAGGGAATGTGAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp TATAGAAATGGTTCAGATGACAATTCTGGAGGTTCAAGAGAAACTGGGCACACTGAAACCCTGGGTTTGTaGAATGTCTGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: YRNGSDDNSGGSRETGHTETLGL*NVCCCQ
Trigger: CTGACAGCAGCAGACATTGCACAAACCCAGGGTTTC...AGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTTTCACGGACTTGGAATaGTCGACCACACTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFFTDLE*STTLFS
Trigger: ACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAA...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAATTCGTTCAAGTTGCTaGTACATGGGTATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEIRSSC*YMGILS
Trigger: GCTCAGAATACCCATGTAGCAGCAACTTGAACGAAT...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAGCACAAACAAGCAGTTaGTGGGAACTTGTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQAQTSS*WELVEV
Trigger: AACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGC...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp TTACTAGTTTCTCAGTGTTTACTGCTAGTCGTCCTCTTTGTGGTATATTGGTTTGTCGCCATTCGTGAGTaGCACGGCAGAATCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LLVSQCLLLVVLFVVYWFVAIRE*HGRIQA
Trigger: AGCTTGGATTCTGCCGTGCCACTCACGAATGGCGAC...AAACCAATATACCACAAAGAGGACGACTAGCAGTAAACACTGAGAAACTAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR TCA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAAAATTACCAGGCACCTaGTTTACCACCCCAATTTAT +
Preference number: 4 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEKLPGT*FTTPIY
Trigger: ATAAATTGGGGTGGTAAATCAGGTGCCTGGTAATTT...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAAACTCCCTATCAACGTaGATTTTGTCAGCATCGTCT +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQNSLST*ILSASS
Trigger: AGACGATGCTGACAAAATGCACGTTGATAGGGAGTT...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp CTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTTTACTTTTTCATGTTCAGTTCTGGGATaGTTTCAGCAGTGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LLMHKQAVAGNLSKFTFSCSVLG*FQQCPQ
Trigger: TTGGGGACACTGCTGAAAGCATCCCAGAACTGAACA...TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTAGTAAGCCCTACTCATaGACAAACAAGCAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFSKPYS*TNKQLL
Trigger: CAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACT...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CCA 90 bp CTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAAGTTTACTTTTTCACACACTGTTCAGTTCTaGGATGCTTTCAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LLMHKQAVAGNLSKFTFSHTVQF*DAFSSV
Trigger: GACACTGCTGAAAGCATCCCAGAACTGAACAGTGTG...TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTTACTCCAAAGTCTTCTaGGTCTTCCAAGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFYSKVF*VFQASL
Trigger: AAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTA...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp ACAGTATGCCTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAATGCCACAACAGTTTCTATATGGAATaGTCCCCCTTTCTAGGATTA +
Preference number: 4 (lower is better)
Translates to: TVCLVCRKEAILNIQCHNSFYME*SPFLGL
Trigger: TAATCCTAGAAAGGGGGAGCATTCCATATAGAAACT...GTTGTGGCATTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465753.1
3UTR CAA 72 bp GCACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTaGCTGGGAACTTGTCGAAGTTTACTTTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALSKPYSCTNKQ*LGTCRSLLFQK
Trigger: TTTCTGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp ATGGGTGCTCAAAAAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCTACTCCAAAGTCTTCTaGGTCTTCCAAGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: MGAQKVPHRHLHLGHQYFYSKVF*VFQASL
Trigger: AAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTA...GAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTTTTTGAGCACCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR TCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTAAAACGTACAAGTTGTaGCATTCGTTCAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFKTYKL*HSFKLL
Trigger: CAGCAACTTGAACGAATGTCACAACTTGTACGTTTT...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAGACCCCCATTTAAGATaGCATTGTTATAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQDPHLR*HCYRNG
Trigger: ACCATTTCTATAACAATGGCATCTTAAATGGGGGTC...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR GCA 90 bp TCAGGCTCAACAGTATGCCTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAAATACTGAACATTCAATaGCACAACTGTAAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SGSTVCLVCRKEAILNIQILNIQ*HNCKVF
Trigger: GAAAACCTTACAGTTGTGGCATTGAATGTTCAGTAT...TTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAGGCATACTGTTGAGCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR GCA 90 bp AAAATATTAACTGTAGCATGTTCGGTATATTCACCCAAAGGCCATATGTCAGAAATGCATACTGATTCCTaGAACGACAGGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KILTVACSVYSPKGHMSEMHTDS*NDRGSA
Trigger: TGCAGACCCCCTGTCGTTGCAGGAATCAGTATGCAT...TTCTGACATATGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR CCA 90 bp TCGATTTGTTCCCACACTAATATGATTAGGAAATACATTCTGATGACCCCCATTCACTCTTGGAAACCCTaGGTTTGTGCAATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SICSHTNMIRKYILMTPIHSWKP*VCAMSA
Trigger: AGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTG...AATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000465753.1
CDS-3UTR CCA 90 bp CAGGTAAACATGGGTGCTCAAAAAGTTCCACATAGACATTTACACTTGGGCCATATAGACATTTACACTTaGGCCATCAGTATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QVNMGAQKVPHRHLHLGHIDIYT*AISISL
Trigger: GAGGGAAATACTGATGGCCCAAGTGTAAATGTCTAT...ATGGCCCAAGTGTAAATGTCTATGTGGAACTTTTTGAGCACCCATGTTTACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CCA 90 bp TCGATTTGTTCCCACACTAATATGATTAGGAAATACATTCTGATGACCCCCATTTCGGAGAAGCACCTGTaGCAGTTTCAGCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: SICSHTNMIRKYILMTPISEKHL*QFQQFL
Trigger: TAGAAACTGCTGAAACTGCCACAGGTGCTTCTCCGA...AATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR TCA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTTCTGCAAAGCTTCATTaGAAAAGACAAACGTTCTCT +
Preference number: 4 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFSAKLH*KRQTFS
Trigger: AGAGAACGTTTGTCTTTTTCAATGAAGCTTTGCAGA...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR TCA 90 bp AAATCTAATTCATGGCAGGTAAACATGGGTGCTCAAAAAGTTCCACATAGACATATGTACACTGCTCTGTaGAATAAACTCGACGTGAGC +
Preference number: 4 (lower is better)
Translates to: KSNSWQVNMGAQKVPHRHMYTAL*NKLDVS
Trigger: GCTCACGTCGAGTTTATTTCACAGAGCAGTGTACAT...ATGTCTATGTGGAACTTTTTGAGCACCCATGTTTACCTGCCATGAATTAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR GCA 90 bp AAAATATTAACTGTAGCATGTTCGGTATATTCACCCAAAGGCCATATGTCAGAAACAGAACCACTCTCCTaGTGTTTGGTGTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: KILTVACSVYSPKGHMSETEPLS*CLVSST
Trigger: GGTTGAAGACACCAAACAGCAGGAGAGTGGTTCTGT...TTCTGACATATGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR GCA 90 bp AATATTAACTGTAGCATGTTCGGTATATTCACCCAAAGGCCATATGTCAGAAAACAACGACAGGGGGTCTaGATTGCTGACACAGTATAT +
Preference number: 4 (lower is better)
Translates to: NINCSMFGIFTQRPYVRKQRQGV*IADTVY
Trigger: ATATACTGTGTCAGCAATGCAGACCCCCTGTCGTTG...TTTTCTGACATATGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR TCA 90 bp ACATTTACTAGTTTCTCAGTGTTTACTGCTAGTCGTCCTCTTTGTGGTATATTGTACTCCAAAGTCTTCTaGGTCTTCCAAGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: TFTSFSVFTASRPLCGILYSKVF*VFQASL
Trigger: AAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTA...CAATATACCACAAAGAGGACGACTAGCAGTAAACACTGAGAAACTAGTAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR TCA 90 bp GTTTCTCAGTGTTTACTGCTAGTCGTCCTCTTTGTGGTATATTGGTTTGAAAATGGGGGTCTGCATTGCTaGCACAGTATATATTTCTAT +
Preference number: 4 (lower is better)
Translates to: VSQCLLLVVLFVVYWFENGGLHC*HSIYFY
Trigger: ATAGAAATATATACTGTGTCAGCAATGCAGACCCCC...ATTTTCAAACCAATATACCACAAAGAGGACGACTAGCAGTAAACACTGAGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR GCA 90 bp ACATTTACTAGTTTCTCAGTGTTTACTGCTAGTCGTCCTCTTTGTGGTATATTGAACTCCCTATCAACGTaGATTTTGTCAGCATCGTCT +
Preference number: 4 (lower is better)
Translates to: TFTSFSVFTASRPLCGILNSLST*ILSASS
Trigger: AGACGATGCTGACAAAATGCACGTTGATAGGGAGTT...CAATATACCACAAAGAGGACGACTAGCAGTAAACACTGAGAAACTAGTAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR CCA 90 bp TTGAAAATATTAACTGTAGCATGTTCGGTATATTCACCCAAAGGCCATATGTCACACTCTCCTGCTGTTTaGTGTCTTCAACCATTGGAT +
Preference number: 4 (lower is better)
Translates to: LKILTVACSVYSPKGHMSHSPAV*CLQPLD
Trigger: ATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTG...TGACATATGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR CCA 90 bp TTGAAAATATTAACTGTAGCATGTTCGGTATATTCACCCAAAGGCCATATGTCAGGTGTCTTCAACCATTaGATTGTTGTTGCAGCTAAC +
Preference number: 4 (lower is better)
Translates to: LKILTVACSVYSPKGHMSGVFNH*IVVAAN
Trigger: GTTAGCTGCAACAACAATCCAATGGTTGAAGACACC...TGACATATGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR GCA 90 bp TCGATTTGTTCCCACACTAATATGATTAGGAAATACATTCTGATGACCCCCATTGACCCCCATTTAAGATaGCATTGTTATAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: SICSHTNMIRKYILMTPIDPHLR*HCYRNG
Trigger: ACCATTTCTATAACAATGGCATCTTAAATGGGGGTC...AATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000465753.1
CDS CCA 90 bp CTCCCGCCGCCGACATGGTCCGTCACCGGAGAGCGCGGGGCTCGCTaGCCTAGAGGACGCGTCGGGGAGGACTCGAGAAGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: LPPPTWSVTGERGAR*PRGRVGEDSRSRRR
Trigger: GCGGCGGCGGCTTCTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGCGGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267339.6
ENST00000465753.1
CDS GCA 90 bp AGCAGCGAGCAGAGCGTGGCCAGGTCCCCGTCGCGGCAGGCGCGGTaGAGCGGGAAACGGAGCGAGAGCAGCTCCTCGCTGGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SSEQSVARSPSRQAR*SGKRSESSSSLEKP
Trigger: GGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCGCCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000465753.1
CDS CCA 90 bp TCCGAGAGCCAGGTCAGCGTCTCTAGGAGCCGTGGTGCAGGTGCATaGTGCCCAGCACGGCACTGTCGTACCGCTCCTGCACCTTCACGG +
Preference number: 5 (lower is better)
Translates to: SESQVSVSRSRGAGA*CPARHCRTAPAPSR
Trigger: CCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCACGGCTCCTAGAGACGCTGACCTGGCTCTCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS GCA 90 bp GAGAGCCAGGTCAGCGTCTCTAGGAGCCGTGGTGCAGGTGCATGGTaGCCAGCACGGCACTGTCGTACCGCTCCTGCACCTTCACGGACT +
Preference number: 5 (lower is better)
Translates to: ESQVSVSRSRGAGAW*PARHCRTAPAPSRT
Trigger: AGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCACGGCTCCTAGAGACGCTGACCTGGCTCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS CCA 90 bp CCAGACCAGGCACTGAGGATGTCCCCCAAAGGCTGCAATGTGGGCTaGCGTCTGCGCGTACCGTGTGGTGGAGACGTTGAGTGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PDQALRMSPKGCNVG*RLRVPCGGDVECGS
Trigger: GGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGGGACATCCTCAGTGCCTGGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000489973.6
ENST00000494859.5
CDS TCA 90 bp CTGCAATGTGGGCTGGCGTCTGCGCGTACCGTGTGGTGGAGACGTTaGGTGTGGCTCCCGCTCTCACCAACTGCACTAAGCACTCCAACT +
Preference number: 5 (lower is better)
Translates to: LQCGLASARTVWWRR*VWLPLSPTALSTPT
Trigger: AGTTGGAGTGCTTAGTGCAGTTGGTGAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000494859.5
CDS GCA 90 bp TGCTTGAATCAGCCAGACCAGGCACTGAGGATGTCCCCCAAAGGCTaGAATGTGGGCTGGCGTCTGCGCGTACCGTGTGGTGGAGACGTT +
Preference number: 5 (lower is better)
Translates to: CLNQPDQALRMSPKG*NVGWRLRVPCGGDV
Trigger: AACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGGGACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000489973.6
ENST00000494859.5
CDS GCA 90 bp TGGTGCAGGTGCATGGTGCCCAGCACGGCACTGTCGTACCGCTCCTaGACCTTCACGGACTTGGAATGCTCGACCACACTGTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: WCRCMVPSTALSYRS*TFTDLECSTTLFSS
Trigger: AGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS TCA 90 bp TGGCATTTCTCAGGTCGACGTGAGCCCCATTCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGTGAATGGGAG +
Preference number: 5 (lower is better)
Translates to: WHFSGRREPHSPQGH*CILGSQSELPCEWE
Trigger: CTCCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGACCTGAGAAATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS GCA 90 bp TTGCTGCTACATGGGTATTCTGAGCTGGCTACCAGGAAGGACTCCTaGGTTTCCGAGAGCCAGGTCAGCGTCTCTAGGAGCCGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: LLLHGYSELATRKDS*VSESQVSVSRSRGA
Trigger: TGCACCACGGCTCCTAGAGACGCTGACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCATGTAGCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS CCA 90 bp TGCCCAGCACGGCACTGTCGTACCGCTCCTGCACCTTCACGGACTTaGAATGCTCGACCACACTGTTCAGTTCTGGGATGCTTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: CPARHCRTAPAPSRT*NARPHCSVLGCFQQ
Trigger: CTGCTGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS TCA 90 bp CTTTCTTGGGGTTATCGACGTGAGCCCCATTCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGTGAATGGGAG +
Preference number: 5 (lower is better)
Translates to: LSWGYRREPHSPQGH*CILGSQSELPCEWE
Trigger: CTCCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGATAACCCCAAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489973.6
CDS GCA 90 bp GAGAAACTGGGCACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTaGTGCTGTCAGGCCACTGGCATTTCTCAGGTCGACGTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: EKLGTLLETLGLCNV*CCQATGISQVDVSP
Trigger: GGGGCTCACGTCGACCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS GCA 90 bp AGCACGGCACTGTCGTACCGCTCCTGCACCTTCACGGACTTGGAATaGTCGACCACACTGTTCAGTTCTGGGATGCTTTCAGCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: STALSYRSCTFTDLE*STTLFSSGMLSAVS
Trigger: GGACACTGCTGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS CCA 90 bp CCCAATGTCTTCCACCCAGGAAGGCCTACTGGCTATGCAGCTACTTaGACTCCCGTTCAGGTGCAGAGAACCGCACAACTCAGGGTTAGC +
Preference number: 5 (lower is better)
Translates to: PNVFHPGRPTGYAAT*TPVQVQRTAQLRVS
Trigger: GCTAACCCTGAGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267339.6
ENST00000485844.1
CDS TCA 90 bp GTTAATGCTGTGAATCGACGTGAGCCCCATTCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGTGAATGGGAG +
Preference number: 5 (lower is better)
Translates to: VNAVNRREPHSPQGH*CILGSQSELPCEWE
Trigger: CTCCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGATTCACAGCATTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460846.1
CDS TCA 90 bp TTCGAATTACGTAGTCGACGTGAGCCCCATTCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGTGAATGGGAG +
Preference number: 5 (lower is better)
Translates to: FELRSRREPHSPQGH*CILGSQSELPCEWE
Trigger: CTCCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGACTACGTAATTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494859.5
CDS GCA 90 bp CAGGAAGGCCTACTGGCTATGCAGCTACTTGGACTCCCGTTCAGGTaGAGAGAACCGCACAACTCAGGGTTAGCTCTCAGGGTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: QEGLLAMQLLGLPFR*REPHNSGLALRVFS
Trigger: AGAGAAGACCCTGAGAGCTAACCCTGAGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267339.6
ENST00000485844.1
CDS-3UTR CAA 90 bp CCACCAGGCGCATTACCACCTGAAGTGAAGGTCTCATCTCGAAGGTGCGCTCAGAATGTTGGCTCCTGCTaGAATCAGCCAGACCAGGCA +
Preference number: 5 (lower is better)
Translates to: PPGALPPEVKVSSRRCAQNVGSC*NQPDQA
Trigger: TGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATT...CTGAGCGCACCTTCGAGATGAGACCTTCACTTCAGGTGGTAATGCGCCTGGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS GCA 90 bp AAACTGGGCACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTGCTaGTGTCAGGCCACTGGCATTTCTCAGGTCGACGTGAGCCCCATT +
Preference number: 5 (lower is better)
Translates to: KLGTLLETLGLCNVC*CQATGISQVDVSPI
Trigger: AATGGGGCTCACGTCGACCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS GCA 90 bp ACAGGTTATCCCCAATGTCTTCCACCCAGGAAGGCCTACTGGCTATaGAGCTACTTGGACTCCCGTTCAGGTGCAGAGAACCGCACAACT +
Preference number: 5 (lower is better)
Translates to: TGYPQCLPPRKAYWL*SYLDSRSGAENRTT
Trigger: AGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGGGGATAACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267339.6
ENST00000485844.1
CDS CCA 90 bp CATAGTACAGGTTATCCCCAATGTCTTCCACCCAGGAAGGCCTACTaGCTATGCAGCTACTTGGACTCCCGTTCAGGTGCAGAGAACCGC +
Preference number: 5 (lower is better)
Translates to: HSTGYPQCLPPRKAY*LCSYLDSRSGAENR
Trigger: GCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGGGGATAACCTGTACTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267339.6
ENST00000485844.1
CDS GCA 90 bp GAGGTTCAAGAGAAACTGGGCACACTCTTGGAAACCCTGGGTTTGTaGAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTCAGGTCGAC +
Preference number: 5 (lower is better)
Translates to: EVQEKLGTLLETLGL*NVCCCQATGISQVD
Trigger: GTCGACCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS CCA 90 bp CTGCACCTTCACGGACTTGGAATGCTCGACCACACTGTTCAGTTCTaGGATGCTTTCAGCAGTGTCCCCAAACCCGTGGTAGTGTCCATA +
Preference number: 5 (lower is better)
Translates to: LHLHGLGMLDHTVQF*DAFSSVPKPVVVSI
Trigger: TATGGACACTACCACGGGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CAA 90 bp TCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGTCACCGCACAATCCCCCTCACAATCCGGTTaGTTAATGTTGGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SHLRSGSTGEISTVTAQSPSQSG*LMLAPA
Trigger: AGCAGGAGCCAACATTAACAAACCGGATTGTGAGGG...GGATTGTGCGGTGACGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS GCA 90 bp CCTTCACGGACTTGGAATGCTCGACCACACTGTTCAGTTCTGGGATaGTTTCAGCAGTGTCCCCAAACCCGTGGTAGTGTCCATAGTACA +
Preference number: 5 (lower is better)
Translates to: PSRTWNARPHCSVLG*FQQCPQTRGSVHST
Trigger: TGTACTATGGACACTACCACGGGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS TCA 90 bp ACAAGGGCACTGATGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGTaGATGGGAGTTTCACCCTCACAATCCGGTTTGTTAATGTTGGCT +
Preference number: 5 (lower is better)
Translates to: TRALMHSRLPERAAL*MGVSPSQSGLLMLA
Trigger: AGCCAACATTAACAAACCGGATTGTGAGGGTGAAACTCCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000489973.6
ENST00000494859.5
CDS GCA 90 bp GAGAAACTGGGCACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTaGTGCTGTCAGGCCACTGGCATTTCTCAGGCTTTAGACACTGAA +
Preference number: 5 (lower is better)
Translates to: EKLGTLLETLGLCNV*CCQATGISQALDTE
Trigger: TTCAGTGTCTAAAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000489973.6
CDS GCA 90 bp GAGGTTCAAGAGAAACTGGGCACACTCTTGGAAACCCTGGGTTTGTaGAATGTCTGCTGCTGTCAGGCCACTGGCATTTCTCAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: EVQEKLGTLLETLGL*NVCCCQATGISQAL
Trigger: TAAAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000489973.6
CDS-3UTR CAA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTCGTGTGGTGGAGACGTaGAGTGTGGCTCCCGCTCTC +
Preference number: 5 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFRVVET*SVAPAL
Trigger: GAGAGCGGGAGCCACACTCAACGTCTCCACCACACG...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CAA 90 bp GTGCTCAAAAAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCCGTGTGGTGGAGACGTaGAGTGTGGCTCCCGCTCTC +
Preference number: 5 (lower is better)
Translates to: VLKKFHIDIYTWAISISLRVVET*SVAPAL
Trigger: GAGAGCGGGAGCCACACTCAACGTCTCCACCACACG...GAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTTTTTGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CAA 90 bp TCCCTTTTGTTAAGTCCCATCTTCGCAGTGGCAGTACAGGAGAAATCTCCACCGAAACTGGGCACACTCTaGGAAACCCTGGGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: SLLLSPIFAVAVQEKSPPKLGTL*ETLGLC
Trigger: GCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTT...CGGTGGAGATTTCTCCTGTACTGCCACTGCGAAGATGGGACTTAACAAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS GCA 90 bp AACTGTCCACTCCCACCTGTTACAACAGCAAACTCCCTATCAACGTaGATTTTGTCAGCATCGTCTTCTGTGTCGCCATTCGTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: NCPLPPVTTANSLST*ILSASSSVSPFVSG
Trigger: GCCACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGGTGGGAGTGGACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485844.1
ENST00000603993.1
CDS-3UTR CAA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAACTAAGCACTCCAACTaGCCGAAATGCGCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQTKHSN*PKCAAQ
Trigger: CTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGT...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CAA 90 bp CTCGTGTGCAGAAAGGAAGCGATACTGAACATTCAATGCCACAACTGTAAGGTTACTAAGCACTCCAACTaGCCGAAATGCGCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LVCRKEAILNIQCHNCKVTKHSN*PKCAAQ
Trigger: CTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGT...AACCTTACAGTTGTGGCATTGAATGTTCAGTATCGCTTCCTTTCTGCACACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CAA 90 bp CAATGCCACAACTGTAAGGTTTTCGGAGAAGCACCTGTGGCAGTTTCAGCAGTTAAACTGGGCACACTCTaGGAAACCCTGGGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: QCHNCKVFGEAPVAVSAVKLGTL*ETLGLC
Trigger: GCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTT...AACTGCTGAAACTGCCACAGGTGCTTCTCCGAAAACCTTACAGTTGTGGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS GCA 90 bp AAACTGGGCACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTGCTaGTGTCAGGCCACTGGCATTTCTCAGGCTTTAGACACTGAATTA +
Preference number: 5 (lower is better)
Translates to: KLGTLLETLGLCNVC*CQATGISQALDTEL
Trigger: TAATTCAGTGTCTAAAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000489973.6
CDS CCA 90 bp TGGTCCAACAGAACCACTCTCCTGCTGTTTGGTGTCTTCAACCATTaGATTGTTGTTGCAGCTAACAGGAAACTGTCCACTCCCACCTGT +
Preference number: 5 (lower is better)
Translates to: WSNRTTLLLFGVFNH*IVVAANRKLSTPTC
Trigger: ACAGGTGGGAGTGGACAGTTTCCTGTTAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGGTTCTGTTGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485844.1
ENST00000603993.1
CDS-3UTR CAA 90 bp AAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCACATTCCCTACTAAGCACTCCAACTaGCCGAAATGCGCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KFHIDIYTWAISISLTFPTKHSN*PKCAAQ
Trigger: CTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGT...AGGGAATGTGAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CAA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAATGGCTATGCAGCTACTaGGACTCCCGTTCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQWLCSY*DSRSGA
Trigger: TGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCA...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CAA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAATGCACCTTCACGGACTaGGAATGCTCGACCACACTG +
Preference number: 5 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQCTFTD*ECSTTL
Trigger: CAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCA...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS CCA 90 bp AACGTGCATTTTGTCAGCATCGTCTTCTGTGTCGCCATTCGTGAGTaGCACGGCAGAATCCAAGCTTTGAGCTTCAGTTCTAGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: NVHFVSIVFCVAIRE*HGRIQALSFSSSFL
Trigger: AAGAAAGCTAGAACTGAAGCTCAAAGCTTGGATTCTGCCGTGCCACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267339.6
ENST00000485844.1
ENST00000489973.6
ENST00000603993.1
CDS-3UTR CAA 90 bp GGACACCTCACTGTAGAAACATCTATGCACTTAGTAAGCCCTACTCATGCACAAAATGTTGGCTCCTGCTaGAATCAGCCAGACCAGGCA +
Preference number: 5 (lower is better)
Translates to: GHLTVETSMHLVSPTHAQNVGSC*NQPDQA
Trigger: TGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATT...TTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CAA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAACCCTCACAATCCGGTTaGTTAATGTTGGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: HLVSPTHAQTSSCWELVEPSQSG*LMLAPA
Trigger: AGCAGGAGCCAACATTAACAAACCGGATTGTGAGGG...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CAA 90 bp CACTTAGTAAGCCCTACTCATGCACAAACAAGCAGTTGCTGGGAACTTGTCGAATGCACAAACAAGCAGTaGCTGGGAACTTGTCGAAGT +
Preference number: 5 (lower is better)
Translates to: HLVSPTHAQTSSCWELVECTNKQ*LGTCRS
Trigger: ACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCA...TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CAA 90 bp TATAGAAATGGTTCAGATGACAATTCTGGAGGTTCAAGAGAAACTGGGCACACTAATGTTGGCTCCTGCTaGAATCAGCCAGACCAGGCA +
Preference number: 5 (lower is better)
Translates to: YRNGSDDNSGGSRETGHTNVGSC*NQPDQA
Trigger: TGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATT...AGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS-3UTR CAA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAAAAACTGGGCACACTCTaGGAAACCCTGGGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: TLHREIAVFRQILQKRVEKLGTL*ETLGLC
Trigger: GCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTT...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS GCA 90 bp CTACTGTTTTTCATATCTGTTACAACAGCAAACTCCCTATCAACGTaGATTTTGTCAGCATCGTCTTCTGTGTCGCCATTCGTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: LLFFISVTTANSLST*ILSASSSVSPFVSG
Trigger: GCCACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGATATGAAAAACAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CAA 90 bp TCGATTTGTTCCCACACTAATATGATTAGGAAATACATTCTGATGACCCCCATTCCCTCACAATCCGGTTaGTTAATGTTGGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SICSHTNMIRKYILMTPIPSQSG*LMLAPA
Trigger: AGCAGGAGCCAACATTAACAAACCGGATTGTGAGGG...AATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000465753.1
CDS-3UTR CAA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAAGGCAGAATCCAAGCTTaGAGCTTCAGTTCTAGCTTT +
Preference number: 5 (lower is better)
Translates to: TLHREIAVFRQILQKRVEGRIQA*SFSSSF
Trigger: AAAGCTAGAACTGAAGCTCAAAGCTTGGATTCTGCC...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CAA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAACTATCAACGTGCATTTaGTCAGCATCGTCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: TLHREIAVFRQILQKRVELSTCI*SASSSV
Trigger: CACAGAAGACGATGCTGACAAAATGCACGTTGATAG...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CAA 90 bp ATGCCCATGTGCAAAGAGATAAATTACCAGGCACCTGATTTACCACCCCAATTTGCAGTTGCTGGGAACTaGTCGAAGTTTACTTTTTCA +
Preference number: 5 (lower is better)
Translates to: MPMCKEINYQAPDLPPQFAVAGN*SKFTFS
Trigger: TGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGC...AAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS TCA 90 bp TTTCAGCAGTTTCTATATGGAATGCTCCCCCTTTCTAGGATTACTTaGAAAAATCAAGTCAATTCGAATTACGTAGTCGACGTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: FQQFLYGMLPLSRIT*KNQVNSNYVVDVSP
Trigger: GGGGCTCACGTCGACTACGTAATTCGAATTGACTTGATTTTTTCAAGTAATCCTAGAAAGGGGGAGCATTCCATATAGAAACTGCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494859.5
CDS-3UTR CAA 90 bp AAATCTAATTCATGGCAGGTAAACATGGGTGCTCAAAAAGTTCCACATAGACATCCCTCACATTCCCTTTaGTTAAGTCCCATCTTCGCA +
Preference number: 5 (lower is better)
Translates to: KSNSWQVNMGAQKVPHRHPSHSL*LSPIFA
Trigger: TGCGAAGATGGGACTTAACAAAAGGGAATGTGAGGG...ATGTCTATGTGGAACTTTTTGAGCACCCATGTTTACCTGCCATGAATTAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CAA 90 bp AAAATATTAACTGTAGCATGTTCGGTATATTCACCCAAAGGCCATATGTCAGAACCACTCTCCTGCTGTTaGGTGTCTTCAACCATTGGA +
Preference number: 5 (lower is better)
Translates to: KILTVACSVYSPKGHMSEPLSCC*VSSTIG
Trigger: TCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGG...TTCTGACATATGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR CAA 90 bp ACCACATTTACTAGTTTCTCAGTGTTTACTGCTAGTCGTCCTCTTTGTGGTATAGACAGGGGGTCTGCATaGCTGACACAGTATATATTT +
Preference number: 5 (lower is better)
Translates to: TTFTSFSVFTASRPLCGIDRGSA*LTQYIF
Trigger: AAATATATACTGTGTCAGCAATGCAGACCCCCTGTC...TATACCACAAAGAGGACGACTAGCAGTAAACACTGAGAAACTAGTAAATGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS TCA 90 bp CAAGCTTTGAGCTTCAGTTCTAGCTTTCTTTACTCCAAAGTCTTCTaGGTCTTCCAAGCATCTCTTTCGATTTGTTCCCACACTAATATG +
Preference number: 5 (lower is better)
Translates to: QALSFSSSFLYSKVF*VFQASLSICSHTNM
Trigger: CATATTAGTGTGGGAACAAATCGAAAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCTCAAAGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267339.6
ENST00000489973.6
ENST00000603993.1
CDS-3UTR CAA 90 bp GTTTCTCAGTGTTTACTGCTAGTCGTCCTCTTTGTGGTATATTGGTTTGAAAATGGCAGAATCCAAGCTTaGAGCTTCAGTTCTAGCTTT +
Preference number: 5 (lower is better)
Translates to: VSQCLLLVVLFVVYWFENGRIQA*SFSSSF
Trigger: AAAGCTAGAACTGAAGCTCAAAGCTTGGATTCTGCC...ATTTTCAAACCAATATACCACAAAGAGGACGACTAGCAGTAAACACTGAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR CAA 90 bp TTACTAGTTTCTCAGTGTTTACTGCTAGTCGTCCTCTTTGTGGTATATTGGTTTCTATCAACGTGCATTTaGTCAGCATCGTCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: LLVSQCLLLVVLFVVYWFLSTCI*SASSSV
Trigger: CACAGAAGACGATGCTGACAAAATGCACGTTGATAG...AAACCAATATACCACAAAGAGGACGACTAGCAGTAAACACTGAGAAACTAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR CAA 90 bp AAAAAGTTCCACATAGACATTTACACTTGGGCCATCAGTATTTCCCTCACATTCCATAGACATTTACACTaGGGCCATCAGTATTTCCCT +
Preference number: 5 (lower is better)
Translates to: KKFHIDIYTWAISISLTFHRHLH*GHQYFP
Trigger: AGGGAAATACTGATGGCCCAAGTGTAAATGTCTATG...GAATGTGAGGGAAATACTGATGGCCCAAGTGTAAATGTCTATGTGGAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310847.8
CDS-3UTR CAA 90 bp ACCTTGCATAGGGAAATAGCTGTGTTCCGTCAAATTCTACAGAAAAGAGTGGAAAAGACAATGTTGAGATaGGCATCAGAAAAACTCCAA +
Preference number: 5 (lower is better)
Translates to: TLHREIAVFRQILQKRVEKTMLR*ASEKLQ
Trigger: TTGGAGTTTTTCTGATGCCAATCTCAACATTGTCTT...TTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS-3UTR CAA 90 bp TTTACTAGTTTCTCAGTGTTTACTGCTAGTCGTCCTCTTTGTGGTATATTGGTTTCAACCATTGGATTGTaGTTGCAGCTAACAGGAAAC +
Preference number: 5 (lower is better)
Translates to: FTSFSVFTASRPLCGILVSTIGL*LQLTGN
Trigger: GTTTCCTGTTAGCTGCAACAACAATCCAATGGTTGA...AACCAATATACCACAAAGAGGACGACTAGCAGTAAACACTGAGAAACTAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR CAA 90 bp ACATTTACTAGTTTCTCAGTGTTTACTGCTAGTCGTCCTCTTTGTGGTATATTGTCTTCAACCATTGGATaGTTGTTGCAGCTAACAGGA +
Preference number: 5 (lower is better)
Translates to: TFTSFSVFTASRPLCGILSSTIG*LLQLTG
Trigger: TCCTGTTAGCTGCAACAACAATCCAATGGTTGAAGA...CAATATACCACAAAGAGGACGACTAGCAGTAAACACTGAGAAACTAGTAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR CAA 90 bp AATATTAACTGTAGCATGTTCGGTATATTCACCCAAAGGCCATATGTCAGAAAAACCATTGGATTGTTGTaGCAGCTAACAGGAAACTGT +
Preference number: 5 (lower is better)
Translates to: NINCSMFGIFTQRPYVRKTIGLL*QLTGNC
Trigger: ACAGTTTCCTGTTAGCTGCAACAACAATCCAATGGT...TTTTCTGACATATGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS-3UTR CAA 90 bp AATATTAACTGTAGCATGTTCGGTATATTCACCCAAAGGCCATATGTCAGAAAATACCCAAAACACTTCTaGTATCTACAAACTTGCCCA +
Preference number: 5 (lower is better)
Translates to: NINCSMFGIFTQRPYVRKYPKHF*YLQTCP
Trigger: TGGGCAAGTTTGTAGATACAAGAAGTGTTTTGGGTA...TTTTCTGACATATGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603993.1
CDS GCA 72 bp CAGAGCGTGGCCAGGTCCCCGTCGCGGCAGGCGCGGTaGAGCGGGAAACGGAGCGAGAGCAGCTCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: QSVARSPSRQAR*SGKRSESSSSL
Trigger: CAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCGCCTGCCGCGACGGGGACCTGGCCACGCTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000465753.1
CDS CCA 72 bp CCGACATGGTCCGTCACCGGAGAGCGCGGGGCTCGCTaGCCTAGAGGACGCGTCGGGGAGGACTCGAGAAGC +
Preference number: 6 (lower is better)
Translates to: PTWSVTGERGAR*PRGRVGEDSRS
Trigger: GCTTCTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000465753.1
CDS GCA 72 bp GTCAGCGTCTCTAGGAGCCGTGGTGCAGGTGCATGGTaGCCAGCACGGCACTGTCGTACCGCTCCTGCACCT +
Preference number: 6 (lower is better)
Translates to: VSVSRSRGAGAW*PARHCRTAPAP
Trigger: AGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCACGGCTCCTAGAGACGCTGAC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS CCA 72 bp CAGGTCAGCGTCTCTAGGAGCCGTGGTGCAGGTGCATaGTGCCCAGCACGGCACTGTCGTACCGCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: QVSVSRSRGAGA*CPARHCRTAPA
Trigger: TGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCACGGCTCCTAGAGACGCTGACCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS TCA 72 bp GGGCTGGCGTCTGCGCGTACCGTGTGGTGGAGACGTTaGGTGTGGCTCCCGCTCTCACCAACTGCACTAAGC +
Preference number: 6 (lower is better)
Translates to: GLASARTVWWRR*VWLPLSPTALS
Trigger: GCTTAGTGCAGTTGGTGAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000494859.5
CDS GCA 72 bp CAGCCAGACCAGGCACTGAGGATGTCCCCCAAAGGCTaGAATGTGGGCTGGCGTCTGCGCGTACCGTGTGGT +
Preference number: 6 (lower is better)
Translates to: QPDQALRMSPKG*NVGWRLRVPCG
Trigger: ACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGGGACATCCTCAGTGCCTGGTCTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000489973.6
ENST00000494859.5
CDS TCA 72 bp GGGCCTCGACGTGAGCCCCATTCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: GPRREPHSPQGH*CILGSQSELPC
Trigger: ACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463156.1
CDS GCA 72 bp GGATGTCCCCCAAAGGCTGCAATGTGGGCTGGCGTCTaGGCGTACCGTGTGGTGGAGACGTTGAGTGTGGCT +
Preference number: 6 (lower is better)
Translates to: GCPPKAAMWAGV*AYRVVETLSVA
Trigger: AGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGGGACATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000489973.6
ENST00000494859.5
CDS CCA 72 bp GCACTGAGGATGTCCCCCAAAGGCTGCAATGTGGGCTaGCGTCTGCGCGTACCGTGTGGTGGAGACGTTGAG +
Preference number: 6 (lower is better)
Translates to: ALRMSPKGCNVG*RLRVPCGGDVE
Trigger: CTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGGGACATCCTCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000489973.6
ENST00000494859.5
CDS CAA 72 bp TGGGCTGGCGTCTGCGCGTACCGTGTGGTGGAGACGTaGAGTGTGGCTCCCGCTCTCACCAACTGCACTAAG +
Preference number: 6 (lower is better)
Translates to: WAGVCAYRVVET*SVAPALTNCTK
Trigger: CTTAGTGCAGTTGGTGAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000494859.5
CDS CAA 90 bp GCTGCAATGTGGGCTGGCGTCTGCGCGTACCGTGTGGTGGAGACGTaGAGTGTGGCTCCCGCTCTCACCAACTGCACTAAGCACTCCAAC +
Preference number: 6 (lower is better)
Translates to: AAMWAGVCAYRVVET*SVAPALTNCTKHSN
Trigger: GTTGGAGTGCTTAGTGCAGTTGGTGAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000494859.5
CDS GCA 72 bp TGCATGGTGCCCAGCACGGCACTGTCGTACCGCTCCTaGACCTTCACGGACTTGGAATGCTCGACCACACTG +
Preference number: 6 (lower is better)
Translates to: CMVPSTALSYRS*TFTDLECSTTL
Trigger: CAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS TCA 72 bp TCAGGTCGACGTGAGCCCCATTCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: SGRREPHSPQGH*CILGSQSELPC
Trigger: ACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS TCA 72 bp CGTAGTCGACGTGAGCCCCATTCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: RSRREPHSPQGH*CILGSQSELPC
Trigger: ACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGACTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494859.5
CDS CAA 90 bp GTGCCCAGCACGGCACTGTCGTACCGCTCCTGCACCTTCACGGACTaGGAATGCTCGACCACACTGTTCAGTTCTGGGATGCTTTCAGCA +
Preference number: 6 (lower is better)
Translates to: VPSTALSYRSCTFTD*ECSTTLFSSGMLSA
Trigger: TGCTGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS TCA 72 bp GTGAATCGACGTGAGCCCCATTCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: VNRREPHSPQGH*CILGSQSELPC
Trigger: ACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460846.1
CDS TCA 72 bp GGTTATCGACGTGAGCCCCATTCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: GYRREPHSPQGH*CILGSQSELPC
Trigger: ACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGATAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489973.6
CDS GCA 72 bp CATGGGTATTCTGAGCTGGCTACCAGGAAGGACTCCTaGGTTTCCGAGAGCCAGGTCAGCGTCTCTAGGAGC +
Preference number: 6 (lower is better)
Translates to: HGYSELATRKDS*VSESQVSVSRS
Trigger: GCTCCTAGAGACGCTGACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS CCA 72 bp CGGCACTGTCGTACCGCTCCTGCACCTTCACGGACTTaGAATGCTCGACCACACTGTTCAGTTCTGGGATGC +
Preference number: 6 (lower is better)
Translates to: RHCRTAPAPSRT*NARPHCSVLGC
Trigger: GCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS TCA 72 bp GATTATCGACGTGAGCCCCATTCGCCACAAGGGCACTaGTGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: DYRREPHSPQGH*CILGSQSELPC
Trigger: ACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGATAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465753.1
CDS GCA 72 bp CCCCAATGTCTTCCACCCAGGAAGGCCTACTGGCTATaGAGCTACTTGGACTCCCGTTCAGGTGCAGAGAAC +
Preference number: 6 (lower is better)
Translates to: PQCLPPRKAYWL*SYLDSRSGAEN
Trigger: GTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267339.6
ENST00000485844.1
CDS CCA 72 bp TTCCACCCAGGAAGGCCTACTGGCTATGCAGCTACTTaGACTCCCGTTCAGGTGCAGAGAACCGCACAACTC +
Preference number: 6 (lower is better)
Translates to: FHPGRPTGYAAT*TPVQVQRTAQL
Trigger: GAGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267339.6
ENST00000485844.1
CDS CAA 72 bp CTTCCACCCAGGAAGGCCTACTGGCTATGCAGCTACTaGGACTCCCGTTCAGGTGCAGAGAACCGCACAACT +
Preference number: 6 (lower is better)
Translates to: LPPRKAYWLCSY*DSRSGAENRTT
Trigger: AGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267339.6
ENST00000485844.1
CDS CAA 72 bp ACGGCACTGTCGTACCGCTCCTGCACCTTCACGGACTaGGAATGCTCGACCACACTGTTCAGTTCTGGGATG +
Preference number: 6 (lower is better)
Translates to: TALSYRSCTFTD*ECSTTLFSSGM
Trigger: CATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS GCA 72 bp GGCACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTaGTGCTGTCAGGCCACTGGCATTTCTCAGGTCGAC +
Preference number: 6 (lower is better)
Translates to: GTLLETLGLCNV*CCQATGISQVD
Trigger: GTCGACCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS GCA 72 bp CTACTGGCTATGCAGCTACTTGGACTCCCGTTCAGGTaGAGAGAACCGCACAACTCAGGGTTAGCTCTCAGG +
Preference number: 6 (lower is better)
Translates to: LLAMQLLGLPFR*REPHNSGLALR
Trigger: CCTGAGAGCTAACCCTGAGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267339.6
ENST00000485844.1
CDS CCA 72 bp GGTTATCCCCAATGTCTTCCACCCAGGAAGGCCTACTaGCTATGCAGCTACTTGGACTCCCGTTCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: GYPQCLPPRKAY*LCSYLDSRSGA
Trigger: TGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGGGGATAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267339.6
ENST00000485844.1
CDS CAA 90 bp GGGAGTTTCACCCTCACAATCCGGTTTGTTAATGTTGGCTCCTGCTaGAATCAGCCAGACCAGGCACTGAGGATGTCCCCCAAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: GSFTLTIRFVNVGSC*NQPDQALRMSPKGC
Trigger: GCAGCCTTTGGGGGACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000489973.6
ENST00000494859.5
CDS GCA 72 bp ACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTGCTaGTGTCAGGCCACTGGCATTTCTCAGGTCGACGTG +
Preference number: 6 (lower is better)
Translates to: TLLETLGLCNVC*CQATGISQVDV
Trigger: CACGTCGACCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS GCA 72 bp CTGTCGTACCGCTCCTGCACCTTCACGGACTTGGAATaGTCGACCACACTGTTCAGTTCTGGGATGCTTTCA +
Preference number: 6 (lower is better)
Translates to: LSYRSCTFTDLE*STTLFSSGMLS
Trigger: TGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS CAA 72 bp ACCCTCACAATCCGGTTTGTTAATGTTGGCTCCTGCTaGAATCAGCCAGACCAGGCACTGAGGATGTCCCCC +
Preference number: 6 (lower is better)
Translates to: TLTIRFVNVGSC*NQPDQALRMSP
Trigger: GGGGGACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000489973.6
ENST00000494859.5
CDS GCA 72 bp ACTTGGAATGCTCGACCACACTGTTCAGTTCTGGGATaGTTTCAGCAGTGTCCCCAAACCCGTGGTAGTGTC +
Preference number: 6 (lower is better)
Translates to: TWNARPHCSVLG*FQQCPQTRGSV
Trigger: GACACTACCACGGGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS GCA 72 bp GGCACACTCTTGGAAACCCTGGGTTTGTGCAATGTCTaGTGCTGTCAGGCCACTGGCATTTCTCAGGCTTTA +
Preference number: 6 (lower is better)
Translates to: GTLLETLGLCNV*CCQATGISQAL
Trigger: TAAAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310847.8
ENST00000489973.6
CDS CAA 90 bp CCACTCCCACCTGTTACAACAGCAAACTCCCTATCAACGTGCATTTaGTCAGCATCGTCTTCTGTGTCGCCATTCGTGAGTGGCACGGCA +
Preference number: 6 (lower is better)
Translates to: PLPPVTTANSLSTCI*SASSSVSPFVSGTA
Trigger: TGCCGTGCCACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGGTGGGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485844.1
ENST00000603993.1
CDS TCA 72 bp CTGATGCATTCTAGGCTCCCAGAGCGAGCTGCCTTGTaGATGGGAGTTTCACCCTCACAATCCGGTTTGTTA +
Preference number: 6 (lower is better)
Translates to: LMHSRLPERAAL*MGVSPSQSGLL
Trigger: TAACAAACCGGATTGTGAGGGTGAAACTCCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267339.6
ENST00000310847.8
ENST00000460846.1
ENST00000465753.1
ENST00000489973.6
ENST00000494859.5
CDS TCA 72 bp GCATTTTGTCAGCATCGTCTTCTGTGTCGCCATTCGTaGGTGGCACGGCAGAATCCAAGCTTTGAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: AFCQHRLLCRHS*VARQNPSFELQ
Trigger: CTGAAGCTCAAAGCTTGGATTCTGCCGTGCCACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267339.6
ENST00000485844.1
ENST00000489973.6
ENST00000603993.1
CDS TCA 72 bp TTGTGCTGTGTCACTCAAACAACCACTCCAGAACCCTaGTGCCTTTCTTGGGGTTATCGACGTGAGCCCCAT +
Preference number: 6 (lower is better)
Translates to: LCCVTQTTTPEP*CLSWGYRREPH
Trigger: ATGGGGCTCACGTCGATAACCCCAAGAAAGGCATCAGGGTTCTGGAGTGGTTGTTTGAGTGACACAGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489973.6
CDS CCA 72 bp TTTGTCAGCATCGTCTTCTGTGTCGCCATTCGTGAGTaGCACGGCAGAATCCAAGCTTTGAGCTTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: FVSIVFCVAIRE*HGRIQALSFSS
Trigger: AGAACTGAAGCTCAAAGCTTGGATTCTGCCGTGCCACTCACGAATGGCGACACAGAAGACGATGCTGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267339.6
ENST00000485844.1
ENST00000489973.6
ENST00000603993.1
CDS GCA 72 bp CTCCCACCTGTTACAACAGCAAACTCCCTATCAACGTaGATTTTGTCAGCATCGTCTTCTGTGTCGCCATTC +
Preference number: 6 (lower is better)
Translates to: LPPVTTANSLST*ILSASSSVSPF
Trigger: GAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485844.1
ENST00000603993.1
CDS CAA 72 bp CCACTCTCCTGCTGTTTGGTGTCTTCAACCATTGGATaGTTGTTGCAGCTAACAGGAAACTGTCCACTCCCA +
Preference number: 6 (lower is better)
Translates to: PLSCCLVSSTIG*LLQLTGNCPLP
Trigger: TGGGAGTGGACAGTTTCCTGTTAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485844.1
ENST00000603993.1
CDS CAA 90 bp CCAACAGAACCACTCTCCTGCTGTTTGGTGTCTTCAACCATTGGATaGTTGTTGCAGCTAACAGGAAACTGTCCACTCCCACCTGTTACA +
Preference number: 6 (lower is better)
Translates to: PTEPLSCCLVSSTIG*LLQLTGNCPLPPVT
Trigger: TGTAACAGGTGGGAGTGGACAGTTTCCTGTTAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGGTTCTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485844.1
ENST00000603993.1
CDS TCA 72 bp AGCTCAGTCCAGGGAAGTCACCATAATGCAGGGTCTTaGGTGGTGGCTCTTATACTGAGAAGGAAAAACAGA +
Preference number: 6 (lower is better)
Translates to: SSVQGSHHNAGS*VVALILRRKNR
Trigger: TCTGTTTTTCCTTCTCAGTATAAGAGCCACCACTCAAGACCCTGCATTATGGTGACTTCCCTGGACTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463156.1
CDS CAA 72 bp CTACATCCACAGCAAAAGCATGATGAAATCAAGGCCTaGTGCTGTGTCACTCAAACAACCACTCCAGAACCC +
Preference number: 6 (lower is better)
Translates to: LHPQQKHDEIKA*CCVTQTTTPEP
Trigger: GGGTTCTGGAGTGGTTGTTTGAGTGACACAGCACAAGGCCTTGATTTCATCATGCTTTTGCTGTGGATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489973.6
CDS CAA 72 bp CCTGTTACAACAGCAAACTCCCTATCAACGTGCATTTaGTCAGCATCGTCTTCTGTGTCGCCATTCGTGAGT +
Preference number: 6 (lower is better)
Translates to: PVTTANSLSTCI*SASSSVSPFVS
Trigger: ACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485844.1
ENST00000603993.1
CDS CAA 90 bp TTTTTCATATCTGTTACAACAGCAAACTCCCTATCAACGTGCATTTaGTCAGCATCGTCTTCTGTGTCGCCATTCGTGAGTGGCACGGCA +
Preference number: 6 (lower is better)
Translates to: FFISVTTANSLSTCI*SASSSVSPFVSGTA
Trigger: TGCCGTGCCACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGATATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS CCA 72 bp AGAACCACTCTCCTGCTGTTTGGTGTCTTCAACCATTaGATTGTTGTTGCAGCTAACAGGAAACTGTCCACT +
Preference number: 6 (lower is better)
Translates to: RTTLLLFGVFNH*IVVAANRKLST
Trigger: AGTGGACAGTTTCCTGTTAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485844.1
ENST00000603993.1
CDS CAA 72 bp TCTGTTACAACAGCAAACTCCCTATCAACGTGCATTTaGTCAGCATCGTCTTCTGTGTCGCCATTCGTGAGT +
Preference number: 6 (lower is better)
Translates to: SVTTANSLSTCI*SASSSVSPFVS
Trigger: ACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS GCA 72 bp TTCATATCTGTTACAACAGCAAACTCCCTATCAACGTaGATTTTGTCAGCATCGTCTTCTGTGTCGCCATTC +
Preference number: 6 (lower is better)
Translates to: FISVTTANSLST*ILSASSSVSPF
Trigger: GAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGATATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267339.6
CDS CAA 72 bp ATTTCTTTTGGTCCAACAGAACCACTCTCCTGCTGTTaGGTGTCTTCAACCATTGGATTGTTGTTGCAGCTA +
Preference number: 6 (lower is better)
Translates to: ISFGPTEPLSCC*VSSTIGLLLQL
Trigger: TAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGGTTCTGTTGGACCAAAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485844.1
ENST00000603993.1
CDS TCA 72 bp AGCTTCAGTTCTAGCTTTCTTTACTCCAAAGTCTTCTaGGTCTTCCAAGCATCTCTTTCGATTTGTTCCCAC +
Preference number: 6 (lower is better)
Translates to: SFSSSFLYSKVF*VFQASLSICSH
Trigger: GTGGGAACAAATCGAAAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267339.6
ENST00000489973.6
ENST00000603993.1
CDS CAA 90 bp TATATTTCTATTTCTTTTGGTCCAACAGAACCACTCTCCTGCTGTTaGGTGTCTTCAACCATTGGATTGTTGTTGCAGCTAACAGGAAAC +
Preference number: 6 (lower is better)
Translates to: YISISFGPTEPLSCC*VSSTIGLLLQLTGN
Trigger: GTTTCCTGTTAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGGTTCTGTTGGACCAAAAGAAATAGAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485844.1
ENST00000603993.1
CDS GCA 72 bp ATTTCTATTTCTTTTGGTCCAACAGAACCACTCTCCTaGTGTTTGGTGTCTTCAACCATTGGATTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: ISISFGPTEPLS*CLVSSTIGLLL
Trigger: CAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGGTTCTGTTGGACCAAAAGAAATAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485844.1
ENST00000603993.1
CDS TCA 72 bp TTTCTATATGGAATGCTCCCCCTTTCTAGGATTACTTaGAAAAATCAAGTCAATTCGAATTACGTAGTCGAC +
Preference number: 6 (lower is better)
Translates to: FLYGMLPLSRIT*KNQVNSNYVVD
Trigger: GTCGACTACGTAATTCGAATTGACTTGATTTTTTCAAGTAATCCTAGAAAGGGGGAGCATTCCATATAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494859.5
CDS TCA 72 bp TTTCTATATGGAATGCTCCCCCTTTCTAGGATTACTTaGAAAAATCAAGTCAATTCGAATTACGTAGCTGTA +
Preference number: 6 (lower is better)
Translates to: FLYGMLPLSRIT*KNQVNSNYVAV
Trigger: TACAGCTACGTAATTCGAATTGACTTGATTTTTTCAAGTAATCCTAGAAAGGGGGAGCATTCCATATAGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475809.1