RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKMY2 (Homo sapiens)

Ensembl gene IDs: ENSG00000106524

Ensembl transcript IDs: ENST00000306999.7, ENST00000421746.1, ENST00000447802.3, ENST00000453623.5, ENST00000627859.1, ENST00000628652.1

Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCAGCTTCTTGCAGGGTGAGGATCATCCACACTGGCACTTGCTCTaGCTTTTACTCCTCAGACACCTGTGGCCCTGCAGGAGCATCCTG +
Preference number: 1 (lower is better)
Translates to: SSFLQGEDHPHWHLL*LLLLRHLWPCRSIL
Trigger: CAGGATGCTCCTGCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGATCCTCACCCTGCAAGAAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR GCA 90 bp AGTTTTCCAGCTTCTTGCAGGGTGAGGATCATCCACACTGGCACTTaGTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: SFPASCRVRIIHTGT*SGFYSSDTCGPAGA
Trigger: TGCTCCTGCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGATCCTCACCCTGCAAGAAGCTGGAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR TCA 90 bp TTAATGCATACGCTGAGAGAACCGTCAATATGCCTTTGTTCCTGCTaGGGGATCTGCCATTCTGGAGGTACAAATACTGCAGATAGAATA +
Preference number: 1 (lower is better)
Translates to: LMHTLREPSICLCSC*GICHSGGTNTADRI
Trigger: TATTCTATCTGCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATTGACGGTTCTCTCAGCGTATGCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR GCA 90 bp CATGCTGATGACAATTTACATCGGCTCCATGTCGCAGTAGTAATTTaGACATATCGAGTTTTCCTTTATATGCTGCATGCATTAGAGGAG +
Preference number: 1 (lower is better)
Translates to: HADDNLHRLHVAVVI*TYRVFLYMLHALEE
Trigger: CTCCTCTAATGCATGCAGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATGGAGCCGATGTAAATTGTCATCAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
3UTR CCA 90 bp ATCTTCAGGATTGGAATCCTTTTGAGAGATACCTACTTCAGCCTCTaGTTGCTCTTCATTAACACAGTTAGAATTGACATCAAGTTTGCC +
Preference number: 1 (lower is better)
Translates to: IFRIGILLRDTYFSL*LLFINTVRIDIKFA
Trigger: GGCAAACTTGATGTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR CAA 90 bp GAGTTTTCCAGCTTCTTGCAGGGTGAGGATCATCCACACTGGCACTaGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: EFSSFLQGEDHPHWH*LWLLLLRHLWPCRS
Trigger: GCTCCTGCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGATCCTCACCCTGCAAGAAGCTGGAAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR TCA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCCAGCTTCTTGCAGGGTaGGGATCATCCACACTGGCA +
Preference number: 2 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCQLLAG*GSSTLA
Trigger: TGCCAGTGTGGATGATCCTCACCCTGCAAGAAGCTG...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR GCA 90 bp CATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCACTTCAGCCTCTGGTTaGTCTTCATTAACACAGTTA +
Preference number: 2 (lower is better)
Translates to: HPHWHLLWLLLLRHLWPCTSASG*SSLTQL
Trigger: TAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGT...GCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR CCA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCACTCCTCAGACACCTGTaGCCCTGCAGGAGCATCCTG +
Preference number: 2 (lower is better)
Translates to: QILQIEYHRRTTSSSECSLLRHL*PCRSIL
Trigger: CAGGATGCTCCTGCAGGGCCACAGGTGTCTGAGGAG...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR TCA 90 bp CGGCTCCATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATGCTGACCATCCCTGCACCGTaGGGGTGCAGAAGAAGCATG +
Preference number: 2 (lower is better)
Translates to: RLHVAVVICTYRVFLYMLTIPAP*GCRRSM
Trigger: CATGCTTCTTCTGCACCCTCACGGTGCAGGGATGGT...CAGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATGGAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453623.5
3UTR-3UTR TCA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCACAGCTTCTTGCAGGGTaGGGATCATCCACACTGGCA +
Preference number: 2 (lower is better)
Translates to: QILQIEYHRRTTSSSECSQLLAG*GSSTLA
Trigger: TGCCAGTGTGGATGATCCTCACCCTGCAAGAAGCTG...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR TCA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCGCAGGTATAACAAGGTaGGGACAATGCATTCCTAGG +
Preference number: 2 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCAGITR*GQCIPR
Trigger: CCTAGGAATGCATTGTCCTCACCTTGTTATACCTGC...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR GCA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCGGAATCCTGCCATGGTaGCACGCAGGTATAACAAGG +
Preference number: 2 (lower is better)
Translates to: TNTADRISPQDYVKFRVFGILPW*HAGITR
Trigger: CCTTGTTATACCTGCGTGGCACCATGGCAGGATTCC...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR GCA 90 bp AAACAGTTGACACGAACATTCTTGCTGGATAATAATGTTCCAGCTTCTTGGACAACGCATCACCATCCCTaGACCGTGAGGGTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: KQLTRTFLLDNNVPASWTTHHHP*TVRVQK
Trigger: CTTCTGCACCCTCACGGTGCAGGGATGGTGATGCGT...TGTCCAAGAAGCTGGAACATTATTATCCAGCAAGAATGTTCGTGTCAACTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
3UTR-3UTR CCA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTGTGGAATCCTGCCATaGTGCCACGCAGGTATAACA +
Preference number: 2 (lower is better)
Translates to: GTNTADRISPQDYVKFRVCGILP*CHAGIT
Trigger: TGTTATACCTGCGTGGCACCATGGCAGGATTCCACA...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CCA 90 bp GAGGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTGGAATCCTGCCATaGTGCCACGCAGGTATAACA +
Preference number: 2 (lower is better)
Translates to: EVQILQIEYHRRTTSSSECGILP*CHAGIT
Trigger: TGTTATACCTGCGTGGCACCATGGCAGGATTCCACA...CTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR TCA 90 bp GAGGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGGCAGGTATAACAAGGTaGGGACAATGCATTCCTAGG +
Preference number: 2 (lower is better)
Translates to: EVQILQIEYHRRTTSSSEAGITR*GQCIPR
Trigger: CCTAGGAATGCATTGTCCTCACCTTGTTATACCTGC...CTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CCA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCAGGGATCTGCCATTCTaGAGGTACAAATACTGCAGA +
Preference number: 2 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCRDLPF*RYKYCR
Trigger: TCTGCAGTATTTGTACCTCCAGAATGGCAGATCCCT...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR CAA 90 bp AGAGGAGTCATTCCATTCTCGTCCAAACAGTTGACACGAACATTCTaGCTGGATAATAATGTTCCAGCTTCTTGGACAGTACGCATCACC +
Preference number: 2 (lower is better)
Translates to: RGVIPFSSKQLTRTF*LDNNVPASWTVRIT
Trigger: GGTGATGCGTACTGTCCAAGAAGCTGGAACATTATTATCCAGCAAGAATGTTCGTGTCAACTGTTTGGACGAGAATGGAATGACTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
3UTR-3UTR GCA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTAAGTTTTCCAGCTTCTTaGAGGGTGAGGATCATCCAC +
Preference number: 2 (lower is better)
Translates to: YSKITQAFRWSMARELALSFPAS*RVRIIH
Trigger: GTGGATGATCCTCACCCTGCAAGAAGCTGGAAAACT...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR GCA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTCTTCCACACCTGTTCTaGTTGTCCCTTTGTTCCCTA +
Preference number: 2 (lower is better)
Translates to: VQILQIEYHRRTTSSSECLPHLF*LSLCSL
Trigger: TAGGGAACAAAGGGACAAGCAGAACAGGTGTGGAAG...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CCA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCACCTACTTCAGCCTCTaGTTGCTCTTCATTAACACA +
Preference number: 2 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCTYFSL*LLFINT
Trigger: TGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGT...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR CCA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCGAGGATCATCCACACTaGCACTTGCTCTGGCTTTTA +
Preference number: 2 (lower is better)
Translates to: TNTADRISPQDYVKFRVFEDHPH*HLLWLL
Trigger: TAAAAGCCAGAGCAAGTGCCAGTGTGGATGATCCTC...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR GCA 90 bp CAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCACGGAATCCTGCCATGGTaGCACGCAGGTATAACAAGG +
Preference number: 2 (lower is better)
Translates to: QKCSIIFRHHILALFKYHGILPW*HAGITR
Trigger: CCTTGTTATACCTGCGTGGCACCATGGCAGGATTCC...GTGGTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR GCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTTCCACACCTGTTCTaGTTGTCCCTTTGTTCCCTA +
Preference number: 2 (lower is better)
Translates to: STQETQKCSIIFRHHILALPHLF*LSLCSL
Trigger: TAGGGAACAAAGGGACAAGCAGAACAGGTGTGGAAG...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR CAA 90 bp AGATTCTTTCTTTCCTTCCCCGGAATCTTCAGGATTGGAATCCTTTaGAGAGATACCTACTTCAGCCTCTGGTTGCTCTTCATTAACACA +
Preference number: 2 (lower is better)
Translates to: RFFLSFPGIFRIGIL*RDTYFSLWLLFINT
Trigger: TGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAAGATTCCGGGGAAGGAAAGAAAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR CCA 90 bp TCGGCTCCATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATGCTAATGTTCCAGCTTCTTaGACAGTACGCATCACCATC +
Preference number: 2 (lower is better)
Translates to: SAPCRSSNLHISSFPLYANVPAS*TVRITI
Trigger: GATGGTGATGCGTACTGTCCAAGAAGCTGGAACATT...AGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATGGAGCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
3UTR-3UTR CCA 90 bp AGAGATACCTACTTCAGCCTCTGGTTGCTCTTCATTAACACAGTTAGAATTGACCTTGTCTCTTTTCTTTaGCAGCCTCCAACTGTTGCT +
Preference number: 2 (lower is better)
Translates to: RDTYFSLWLLFINTVRIDLVSFL*QPPTVA
Trigger: AGCAACAGTTGGAGGCTGCCAAAGAAAAGAGACAAG...GTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR CAA 90 bp TTCAGGATTGGAATCCTTTTGAGAGATACCTACTTCAGCCTCTGGTaGCTCTTCATTAACACAGTTAGAATTGACATCAAGTTTGCCGTG +
Preference number: 2 (lower is better)
Translates to: FRIGILLRDTYFSLW*LFINTVRIDIKFAV
Trigger: CACGGCAAACTTGATGTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR TCA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTAAAATTTTTCCCTTCCTaGAAATCTCTCTTCCACACC +
Preference number: 2 (lower is better)
Translates to: YSKITQAFRWSMARELALKFFPS*KSLFHT
Trigger: GGTGTGGAAGAGAGATTTTCAGGAAGGGAAAAATTT...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR GCA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTATGGTCAACAGGGGTTTaGTTGAAAACCTGTATTCTA +
Preference number: 2 (lower is better)
Translates to: YSKITQAFRWSMARELALWSTGV*LKTCIL
Trigger: TAGAATACAGGTTTTCAAGCAAACCCCTGTTGACCA...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR TCA 90 bp GAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGGATCATTTCTATATAAATTTTTCCCTTCCTaGAAATCTCTCTTCCACACC +
Preference number: 2 (lower is better)
Translates to: EYHRRTTSSSECSGSFLYKFFPS*KSLFHT
Trigger: GGTGTGGAAGAGAGATTTTCAGGAAGGGAAAAATTT...ATATAGAAATGATCCTGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR TCA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTAAAACTACAATTAGCTaGACTATGGCAAAGGTCCTT +
Preference number: 2 (lower is better)
Translates to: VQILQIEYHRRTTSSSECKTTIS*TMAKVL
Trigger: AAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTT...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR GCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTTGGTCAACAGGGGTTTaGTTGAAAACCTGTATTCTA +
Preference number: 2 (lower is better)
Translates to: STQETQKCSIIFRHHILAWSTGV*LKTCIL
Trigger: TAGAATACAGGTTTTCAAGCAAACCCCTGTTGACCA...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CCA 90 bp CAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCACACTCAGGCTTTCAGGTaGAGTATGGCACGTGAATTA +
Preference number: 2 (lower is better)
Translates to: QKCSIIFRHHILALFKYHTQAFR*SMAREL
Trigger: TAATTCACGTGCCATACTCCACCTGAAAGCCTGAGT...GTGGTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CCA 90 bp CGGCTCCATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATGCTGCACGAACATTCTTGCTaGATAATAATGTTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: RLHVAVVICTYRVFLYMLHEHSC*IIMFQL
Trigger: AAGCTGGAACATTATTATCCAGCAAGAATGTTCGTG...CAGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATGGAGCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
3UTR-3UTR TCA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACGTGGAGTATGGCACGTaGATTAGCCTTACAGTAATT +
Preference number: 2 (lower is better)
Translates to: TQKCSIIFRHHILALFKYVEYGT*ISLTVI
Trigger: AATTACTGTAAGGCTAATTCACGTGCCATACTCCAC...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR TCA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACAAAACCTGTATTCTATaGAATGTGGAATCCTGCCAT +
Preference number: 2 (lower is better)
Translates to: TQKCSIIFRHHILALFKYKTCIL*NVESCH
Trigger: ATGGCAGGATTCCACATTTCATAGAATACAGGTTTT...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR GCA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACTTCTTCATTCATCCTTaGATTCATACACTTTCTCAC +
Preference number: 2 (lower is better)
Translates to: TQKCSIIFRHHILALFKYFFIHP*IHTLSH
Trigger: GTGAGAAAGTGTATGAATGCAAGGATGAATGAAGAA...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR GCA 72 bp GCTTCTTGCAGGGTGAGGATCATCCACACTGGCACTTaGTCTGGCTTTTACTCCTCAGACACCTGTGGCCCT +
Preference number: 3 (lower is better)
Translates to: ASCRVRIIHTGT*SGFYSSDTCGP
Trigger: AGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGATCCTCACCCTGCAAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR CAA 90 bp ATCATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTCCACACCTGTTCTGCTaGTCCCTTTGTTCCCTAAAG +
Preference number: 3 (lower is better)
Translates to: IIHTGTCSGFYSSDTCGPPHLFC*SLCSLK
Trigger: CTTTAGGGAACAAAGGGACAAGCAGAACAGGTGTGG...AGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR CCA 72 bp TTTTCCAGCTTCTTGCAGGGTGAGGATCATCCACACTaGCACTTGCTCTGGCTTTTACTCCTCAGACACCTG +
Preference number: 3 (lower is better)
Translates to: FSSFLQGEDHPH*HLLWLLLLRHL
Trigger: CAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGATCCTCACCCTGCAAGAAGCTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR CAA 90 bp CATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCTTAACACAGTTAGAATaGACATCAAGTTTGCCGTGG +
Preference number: 3 (lower is better)
Translates to: HPHWHLLWLLLLRHLWPCLTQLE*TSSLPW
Trigger: CCACGGCAAACTTGATGTCAATTCTAACTGTGTTAA...GCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR TCA 72 bp ACGCTGAGAGAACCGTCAATATGCCTTTGTTCCTGCTaGGGGATCTGCCATTCTGGAGGTACAAATACTGCA +
Preference number: 3 (lower is better)
Translates to: TLREPSICLCSC*GICHSGGTNTA
Trigger: TGCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATTGACGGTTCTCTCAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CAA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCGAGTTTTCCAGCTTCTaGCAGGGTGAGGATCATCCA +
Preference number: 3 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCEFSSF*QGEDHP
Trigger: TGGATGATCCTCACCCTGCAAGAAGCTGGAAAACTC...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CAA 90 bp GAGGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGGAGTTTTCCAGCTTCTaGCAGGGTGAGGATCATCCA +
Preference number: 3 (lower is better)
Translates to: EVQILQIEYHRRTTSSSEEFSSF*QGEDHP
Trigger: TGGATGATCCTCACCCTGCAAGAAGCTGGAAAACTC...CTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CAA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGCCACACCTGTTCTGCTaGTCCCTTTGTTCCCTAAAG +
Preference number: 3 (lower is better)
Translates to: GTNTADRISPQDYVKFRVPHLFC*SLCSLK
Trigger: CTTTAGGGAACAAAGGGACAAGCAGAACAGGTGTGG...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CAA 90 bp CGGAATCTTCAGGATTGGAATCCTTTTGAGAGATACCTACTTCAGCCTCTGGTTTCTTGTCTCTTTTCTTaGGCAGCCTCCAACTGTTGC +
Preference number: 3 (lower is better)
Translates to: RNLQDWNPFERYLLQPLVSCLFS*AASNCC
Trigger: GCAACAGTTGGAGGCTGCCAAAGAAAAGAGACAAGA...AACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAAGATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR CAA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTACCGTCAATATGCCTTaGTTCCTGCTGAGGGATCTG +
Preference number: 3 (lower is better)
Translates to: STQETQKCSIIFRHHILATVNMP*FLLRDL
Trigger: CAGATCCCTCAGCAGGAACAAAGGCATATTGACGGT...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CAA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTGGCAGCCTCCAACTGTaGCTTTTCGTAAATGTCCTT +
Preference number: 3 (lower is better)
Translates to: VQILQIEYHRRTTSSSECGSLQL*LFVNVL
Trigger: AAGGACATTTACGAAAAGCAACAGTTGGAGGCTGCC...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR CAA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGTTCTGCTTGTCCCTTaGTTCCCTAAAGCCTGTATT +
Preference number: 3 (lower is better)
Translates to: QILQIEYHRRTTSSSECSVLLVP*FPKACI
Trigger: AATACAGGCTTTAGGGAACAAAGGGACAAGCAGAAC...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CAA 90 bp AAGTGCAGCAAACATGAGGGCTGTGTATCCATGTTCATGCTGATGACAATTTACTTCTCGTCCAAACAGTaGACACGAACATTCTTGCTG +
Preference number: 3 (lower is better)
Translates to: KCSKHEGCVSMFMLMTIYFSSKQ*TRTFLL
Trigger: CAGCAAGAATGTTCGTGTCAACTGTTTGGACGAGAA...GTAAATTGTCATCAGCATGAACATGGATACACAGCCCTCATGTTTGCTGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
3UTR-3UTR CAA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCACTATGGCAAAGGTCCTaGAACATAAAGCCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: QILQIEYHRRTTSSSECSLWQRS*NIKPFF
Trigger: GAAGAAAGGCTTTATGTTCAAGGACCTTTGCCATAG...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CAA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGGATTGGAATCCTTTaGAGAGATACCTACTTCAGC +
Preference number: 3 (lower is better)
Translates to: TNTADRISPQDYVKFRVFRIGIL*RDTYFS
Trigger: GCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCT...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR TCA 72 bp GCATTAGAGGAGTCATTCCATTCTCGTCCAAACAGTTaGCACGAACATTCTTGCTGGATAATAATGTTCCAG +
Preference number: 3 (lower is better)
Translates to: ALEESFHSRPNS*HEHSCWIIMFQ
Trigger: CTGGAACATTATTATCCAGCAAGAATGTTCGTGTCAACTGTTTGGACGAGAATGGAATGACTCCTCTAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
3UTR-3UTR CAA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTAGGGATCTATTTTCCTTaGAAACAATTGCTGGAAAGC +
Preference number: 3 (lower is better)
Translates to: YSKITQAFRWSMARELALGIYFP*KQLLES
Trigger: GCTTTCCAGCAATTGTTTCAAAGGAAAATAGATCCC...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CAA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTATGGCAAAGGTCCTaGAACATAAAGCCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: STQETQKCSIIFRHHILALWQRS*NIKPFF
Trigger: GAAGAAAGGCTTTATGTTCAAGGACCTTTGCCATAG...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR-3UTR CAA 90 bp GAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGGATCATTTCTATATGAATTGACATCAAGTTaGCCGTGGTTTTCCTCTTGT +
Preference number: 3 (lower is better)
Translates to: EYHRRTTSSSECSGSFLYELTSS*PWFSSC
Trigger: ACAAGAGGAAAACCACGGCAAACTTGATGTCAATTC...ATATAGAAATGATCCTGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR CAA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTTACTTCAGCCTCTGGTaGCTCTTCATTAACACAGTT +
Preference number: 3 (lower is better)
Translates to: STQETQKCSIIFRHHILAYFSLW*LFINTV
Trigger: AACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTA...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447802.3
3UTR-3UTR CAA 90 bp CATGTTCATGCTGATGACAATTTACATCGGCTCCATGTCGCAGTAGTAATTTGCTTGACACGAACATTCTaGCTGGATAATAATGTTCCA +
Preference number: 3 (lower is better)
Translates to: HVHADDNLHRLHVAVVICLTRTF*LDNNVP
Trigger: TGGAACATTATTATCCAGCAAGAATGTTCGTGTCAA...GCAAATTACTACTGCGACATGGAGCCGATGTAAATTGTCATCAGCATGAACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
3UTR TCA 72 bp CAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTaGATTAGCCTTACAGTAATTGTGTACATAGTATGT +
Preference number: 3 (lower is better)
Translates to: QDNSGFQVEYGT*ISLTVIVYIVC
Trigger: ACATACTATGTACACAATTACTGTAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR GCA 72 bp GACAATTTACATCGGCTCCATGTCGCAGTAGTAATTTaGACATATCGAGTTTTCCTTTATATGCTGCATGCA +
Preference number: 3 (lower is better)
Translates to: DNLHRLHVAVVI*TYRVFLYMLHA
Trigger: TGCATGCAGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATGGAGCCGATGTAAATTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
3UTR-3UTR CAA 90 bp CAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCACGGGATCTATTTTCCTTaGAAACAATTGCTGGAAAGC +
Preference number: 3 (lower is better)
Translates to: QKCSIIFRHHILALFKYHGIYFP*KQLLES
Trigger: GCTTTCCAGCAATTGTTTCAAAGGAAAATAGATCCC...GTGGTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp CATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCGAACGCCAGCCGCAATaGGGCAACTTGAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: HPHWHLLWLLLLRHLWPCERQPQ*GNLRPR
Trigger: TCTTGGTCTCAAGTTGCCTCATTGCGGCTGGCGTTC...GCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CCA 90 bp CATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCTCCACAAAACCCACCTaGCCAGTGATGGCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: HPHWHLLWLLLLRHLWPCSTKPT*PVMAWV
Trigger: TACCCAAGCCATCACTGGCCAGGTGGGTTTTGTGGA...GCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR TCA 90 bp ATCATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTACAAAGGCTGCCATCTaGGCTGCTGTTCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: IIHTGTCSGFYSSDTCGPTKAAI*AAVLPT
Trigger: TGTGGGAAGAACAGCAGCTCAGATGGCAGCCTTTGT...AGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp ATCATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGGCTGCCATCTGAGCTaGTGTTCTTCCCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: IIHTGTCSGFYSSDTCGPGCHLS*CSSHRV
Trigger: AACTCTGTGGGAAGAACAGCAGCTCAGATGGCAGCC...AGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CCA 90 bp ATCATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTAGCTCCTTCTCCTCCTaGGTCAGCTCGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: IIHTGTCSGFYSSDTCGPSSFSS*VSSPFF
Trigger: AAAGAAAGGCGAGCTGACCCAGGAGGAGAAGGAGCT...AGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CCA 90 bp CACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCAGGAGCAGGGATCTGCCATTCTaGAGGTACAAATACTGCAGA +
Preference number: 4 (lower is better)
Translates to: HWHLLWLLLLRHLWPCRSRDLPF*RYKYCR
Trigger: TCTGCAGTATTTGTACCTCCAGAATGGCAGATCCCT...GCTCCTGCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CCA 90 bp TCGTCCAAACAGTTGACACGAACATTCTTGCTGGATAATAATGTTCCAGCTTCTCTCGGGGCTCCCCGCTaGGACTCAGCACTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SSKQLTRTFLLDNNVPASLGAPR*DSALRK
Trigger: CTTCCGCAGTGCTGAGTCCCAGCGGGGAGCCCCGAG...AGAAGCTGGAACATTATTATCCAGCAAGAATGTTCGTGTCAACTGTTTGGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR GCA 90 bp ATCATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTCTTCCACACCTGTTCTaGTTGTCCCTTTGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: IIHTGTCSGFYSSDTCGPLPHLF*LSLCSL
Trigger: TAGGGAACAAAGGGACAAGCAGAACAGGTGTGGAAG...AGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp AAGTGCAGCAAACATGAGGGCTGTGTATCCATGTTCATGCTGATGACAATTTACGCTGGGACTCAGCACTaGGGAAGTGGGGCACGCCTT +
Preference number: 4 (lower is better)
Translates to: KCSKHEGCVSMFMLMTIYAGTQH*GSGARL
Trigger: AAGGCGTGCCCCACTTCCGCAGTGCTGAGTCCCAGC...GTAAATTGTCATCAGCATGAACATGGATACACAGCCCTCATGTTTGCTGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CCA 90 bp CATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCCTTTTCTTGATACACTaGAAAGCCATCAGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: HPHWHLLWLLLLRHLWPCLFLIH*KAIRSS
Trigger: CGAGCTTCTGATGGCTTTCCAGTGTATCAAGAAAAG...GCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CCA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGCTCCTCAGACACCTGTaGCCCTGCAGGAGCATCCTG +
Preference number: 4 (lower is better)
Translates to: GTNTADRISPQDYVKFRVLLRHL*PCRSIL
Trigger: CAGGATGCTCCTGCAGGGCCACAGGTGTCTGAGGAG...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp ATCATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTAAAGTGCAGCAAACATaGGGGCTGTGTATCCATGTT +
Preference number: 4 (lower is better)
Translates to: IIHTGTCSGFYSSDTCGPKVQQT*GLCIHV
Trigger: AACATGGATACACAGCCCTCATGTTTGCTGCACTTT...AGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR TCA 90 bp ACATCAAGTTTGCCGTGGTTTTCCTCTTGTCTCTTTTCTTTGGCAGCCTCCAACCAGCTTCTTGCAGGGTaGGGATCATCCACACTGGCA +
Preference number: 4 (lower is better)
Translates to: TSSLPWFSSCLFSLAASNQLLAG*GSSTLA
Trigger: TGCCAGTGTGGATGATCCTCACCCTGCAAGAAGCTG...GTTGGAGGCTGCCAAAGAAAAGAGACAAGAGGAAAACCACGGCAAACTTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp CACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCAGGAGCGTCGCAGTAGTAATTTaGACATATCGAGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: HWHLLWLLLLRHLWPCRSVAVVI*TYRVFL
Trigger: AAGGAAAACTCGATATGTGCAAATTACTACTGCGAC...GCTCCTGCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp CATGTTCATGCTGATGACAATTTACATCGGCTCCATGTCGCAGTAGTAATTTGCCACGCTGATGTCACCTaGCAGGTAACGGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: HVHADDNLHRLHVAVVICHADVT*QVTGLG
Trigger: GCCGAGTCCCGTTACCTGGCAGGTGACATCAGCGTG...GCAAATTACTACTGCGACATGGAGCCGATGTAAATTGTCATCAGCATGAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CCA 90 bp CGGCTCCATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATGCTGGGGAAATATGGCTTCTaGCTCGTCCTCGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RLHVAVVICTYRVFLYMLGKYGF*LVLGAP
Trigger: GGGAGCCCCGAGGACGAGCCAGAAGCCATATTTCCC...CAGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATGGAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CCA 90 bp CATTCTTGCTGGATAATAATGTTCCAGCTTCTTGGACAGTACGCATCACCATCCGACTCCGGGGAAATATaGCTTCTGGCTCGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: HSCWIIMFQLLGQYASPSDSGEI*LLARPR
Trigger: CCGAGGACGAGCCAGAAGCCATATTTCCCCGGAGTC...GGATGGTGATGCGTACTGTCCAAGAAGCTGGAACATTATTATCCAGCAAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CCA 90 bp TCGTCCAAACAGTTGACACGAACATTCTTGCTGGATAATAATGTTCCAGCTTCTGGCAGGGAACTCCTCTaGGACGTCCACTCGGGGACT +
Preference number: 4 (lower is better)
Translates to: SSKQLTRTFLLDNNVPASGRELL*DVHSGT
Trigger: AGTCCCCGAGTGGACGTCCCAGAGGAGTTCCCTGCC...AGAAGCTGGAACATTATTATCCAGCAAGAATGTTCGTGTCAACTGTTTGGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR TCA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCTTGAGACCAAGACACTaGGTAGCCAACCGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCLRPRH*VANRGN
Trigger: GTTTCCGCGGTTGGCTACTCAGTGTCTTGGTCTCAA...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp GAGGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTTTGTGCAGCGGGCCTaGCAACTTTGGGGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: EVQILQIEYHRRTTSSSEFVQRA*QLWGQF
Trigger: AAACTGCCCCCAAAGTTGGCAGGCCCGCTGCACAAA...CTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCGGAATCCTGCCATGGTaGCACGCAGGTATAACAAGG +
Preference number: 4 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCGILPW*HAGITR
Trigger: CCTTGTTATACCTGCGTGGCACCATGGCAGGATTCC...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp CGGAATCTTCAGGATTGGAATCCTTTTGAGAGATACCTACTTCAGCCTCTGGTTCGGGCCTGCCAACTTTaGGGGCAGTTTTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RNLQDWNPFERYLLQPLVRACQL*GQFWLF
Trigger: AAAGAGCCAAAACTGCCCCCAAAGTTGGCAGGCCCG...AACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAAGATTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR TCA 90 bp GATGACAATTTACATCGGCTCCATGTCGCAGTAGTAATTTGCACATATCGAGTTACCATCCCTGCACCGTaGGGGTGCAGAAGAAGCATG +
Preference number: 4 (lower is better)
Translates to: DDNLHRLHVAVVICTYRVTIPAP*GCRRSM
Trigger: CATGCTTCTTCTGCACCCTCACGGTGCAGGGATGGT...AACTCGATATGTGCAAATTACTACTGCGACATGGAGCCGATGTAAATTGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR GCA 90 bp GAGGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGGGCTGCCATCTGAGCTaGTGTTCTTCCCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: EVQILQIEYHRRTTSSSEGCHLS*CSSHRV
Trigger: AACTCTGTGGGAAGAACAGCAGCTCAGATGGCAGCC...CTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp CATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCTTCTTCATTCATCCTTaGATTCATACACTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: HPHWHLLWLLLLRHLWPCFFIHP*IHTLSH
Trigger: GTGAGAAAGTGTATGAATGCAAGGATGAATGAAGAA...GCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CCA 90 bp ACATCAAGTTTGCCGTGGTTTTCCTCTTGTCTCTTTTCTTTGGCAGCCTCCAACCTTTGGGGGCAGTTTTaGCTCTTTATCCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TSSLPWFSSCLFSLAASNLWGQF*LFIQSL
Trigger: CAGGGACTGGATAAAGAGCCAAAACTGCCCCCAAAG...GTTGGAGGCTGCCAAAGAAAAGAGACAAGAGGAAAACCACGGCAAACTTGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CCA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTACGGGCCTGCCAACTTTaGGGGCAGTTTTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: YSKITQAFRWSMARELALRACQL*GQFWLF
Trigger: AAAGAGCCAAAACTGCCCCCAAAGTTGGCAGGCCCG...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp GAGGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGCTTCGAACCAGCTGCTaGAGGAGTGTAGCTTCACAG +
Preference number: 4 (lower is better)
Translates to: EVQILQIEYHRRTTSSSELRTSC*RSVASQ
Trigger: CTGTGAAGCTACACTCCTCCAGCAGCTGGTTCGAAG...CTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTGGCCAGTGATGGCTTaGGTAAGGACGGAGAATGCA +
Preference number: 4 (lower is better)
Translates to: GTNTADRISPQDYVKFRVWPVMA*VRTENA
Trigger: TGCATTCTCCGTCCTTACCCAAGCCATCACTGGCCA...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp CGGAATCTTCAGGATTGGAATCCTTTTGAGAGATACCTACTTCAGCCTCTGGTTTGGCCAGTGATGGCTTaGGTAAGGACGGAGAATGCA +
Preference number: 4 (lower is better)
Translates to: RNLQDWNPFERYLLQPLVWPVMA*VRTENA
Trigger: TGCATTCTCCGTCCTTACCCAAGCCATCACTGGCCA...AACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAAGATTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CCA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCTGTGGAATCCTGCCATaGTGCCACGCAGGTATAACA +
Preference number: 4 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCCGILP*CHAGIT
Trigger: TGTTATACCTGCGTGGCACCATGGCAGGATTCCACA...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp CATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATGCTGCATGCATCAGCACTGCGGAAGTaGGGCACGCCTTTCCCGATG +
Preference number: 4 (lower is better)
Translates to: HVAVVICTYRVFLYMLHASALRK*GTPFPM
Trigger: CATCGGGAAAGGCGTGCCCCACTTCCGCAGTGCTGA...TGCATGCAGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR TCA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCTCTCGTCCAAACAGTTaGCACGAACATTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCSRPNS*HEHSCW
Trigger: CCAGCAAGAATGTTCGTGTCAACTGTTTGGACGAGA...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp TTGCTGGATAATAATGTTCCAGCTTCTTGGACAGTACGCATCACCATCCCTGCATCTCGTCCAAACAGTTaGCACGAACATTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLDNNVPASWTVRITIPASRPNS*HEHSCW
Trigger: CCAGCAAGAATGTTCGTGTCAACTGTTTGGACGAGA...TGCAGGGATGGTGATGCGTACTGTCCAAGAAGCTGGAACATTATTATCCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR TCA 90 bp ACATCAAGTTTGCCGTGGTTTTCCTCTTGTCTCTTTTCTTTGGCAGCCTCCAACGCAGGTATAACAAGGTaGGGACAATGCATTCCTAGG +
Preference number: 4 (lower is better)
Translates to: TSSLPWFSSCLFSLAASNAGITR*GQCIPR
Trigger: CCTAGGAATGCATTGTCCTCACCTTGTTATACCTGC...GTTGGAGGCTGCCAAAGAAAAGAGACAAGAGGAAAACCACGGCAAACTTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR TCA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCTGCCTTTGTTCCTGCTaGGGGATCTGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: TNTADRISPQDYVKFRVFCLCSC*GICHSG
Trigger: TCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCA...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp GTCTCTTTTCTTTGGCAGCCTCCAACTGTTGCTTTTCGTAAATGTCCTTCAGATTGCCTTTGTTCCTGCTaGGGGATCTGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: VSFLWQPPTVAFRKCPSDCLCSC*GICHSG
Trigger: TCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCA...ATCTGAAGGACATTTACGAAAAGCAACAGTTGGAGGCTGCCAAAGAAAAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR TCA 90 bp TCGGCTCCATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATGCTAGCATGCAGTCACGCTaGTGTCACCTGCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: SAPCRSSNLHISSFPLYASMQSR*CHLPGN
Trigger: GTTACCTGGCAGGTGACATCAGCGTGACTGCATGCT...AGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATGGAGCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR GCA 90 bp CGGAATCTTCAGGATTGGAATCCTTTTGAGAGATACCTACTTCAGCCTCTGGTTTTGACCCACAAAGGCTaGCATCTGAGCTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RNLQDWNPFERYLLQPLVLTHKG*HLSCCS
Trigger: AGAACAGCAGCTCAGATGGCAGCCTTTGTGGGTCAA...AACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAAGATTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCAGTTTTCCAGCTTCTTaGAGGGTGAGGATCATCCAC +
Preference number: 4 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCSFPAS*RVRIIH
Trigger: GTGGATGATCCTCACCCTGCAAGAAGCTGGAAAACT...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp ATCATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTCAAGAAACCCAGAAATaGAGCATTATCTTCAGACAT +
Preference number: 4 (lower is better)
Translates to: IIHTGTCSGFYSSDTCGPQETQK*SIIFRH
Trigger: ATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTG...AGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp CATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATGCTGCATGCAACGCATCACCATCCCTaGACCGTGAGGGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HVAVVICTYRVFLYMLHATHHHP*TVRVQK
Trigger: CTTCTGCACCCTCACGGTGCAGGGATGGTGATGCGT...TGCATGCAGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CCA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGCTCCTTCTCCTCCTaGGTCAGCTCGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TNTADRISPQDYVKFRVFSSFSS*VSSPFF
Trigger: AAAGAAAGGCGAGCTGACCCAGGAGGAGAAGGAGCT...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR CAA 72 bp TTTAATGCATACGCTGAGAGAACCGTCAATATGCCTTaGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: FNAYAERTVNMP*FLLRDLPFWRY
Trigger: GTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATTGACGGTTCTCTCAGCGTATGCATTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR CAA 72 bp CTTTCCTTCCCCGGAATCTTCAGGATTGGAATCCTTTaGAGAGATACCTACTTCAGCCTCTGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSFPGIFRIGIL*RDTYFSLWLLF
Trigger: GAAGAGCAACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAAGATTCCGGGGAAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR TCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTTCGCCTTTCTTTATGTaGACCATTGCTCCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: STQETQKCSIIFRHHILASPFFM*TIAPAS
Trigger: GCTGGCGGGAGCAATGGTTCACATAAAGAAAGGCGA...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp GAGGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGCTTTATGTGAACCATTaGTCCCGCCAGCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: EVQILQIEYHRRTTSSSELYVNH*SRQLEG
Trigger: ACCTTCAAGCTGGCGGGAGCAATGGTTCACATAAAG...CTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTTGACCCACAAAGGCTaGCATCTGAGCTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: VQILQIEYHRRTTSSSECLTHKG*HLSCCS
Trigger: AGAACAGCAGCTCAGATGGCAGCCTTTGTGGGTCAA...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp CGGAATCTTCAGGATTGGAATCCTTTTGAGAGATACCTACTTCAGCCTCTGGTTGTGGTGATAATTTTGTaGAGCGGGCCTGCCAACTTT +
Preference number: 4 (lower is better)
Translates to: RNLQDWNPFERYLLQPLVVVIIL*SGPANF
Trigger: AAAGTTGGCAGGCCCGCTGCACAAAATTATCACCAC...AACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAAGATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp CGGAATCTTCAGGATTGGAATCCTTTTGAGAGATACCTACTTCAGCCTCTGGTTGCATTTATTCAGGGCTaGTTCTTCTGTCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RNLQDWNPFERYLLQPLVAFIQG*FFCQQR
Trigger: CCTCTGCTGACAGAAGAAGCAGCCCTGAATAAATGC...AACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAAGATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCATGCTTCGAACCAGCTaGTGGAGGAGTGTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TNTADRISPQDYVKFRVFMLRTS*WRSVAS
Trigger: TGAAGCTACACTCCTCCAGCAGCTGGTTCGAAGCAT...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTAATGCTTCGAACCAGCTaGTGGAGGAGTGTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: YSKITQAFRWSMARELALMLRTS*WRSVAS
Trigger: TGAAGCTACACTCCTCCAGCAGCTGGTTCGAAGCAT...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTCTTTGGGGGCAGTTTTaGCTCTTTATCCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VQILQIEYHRRTTSSSECLWGQF*LFIQSL
Trigger: CAGGGACTGGATAAAGAGCCAAAACTGCCCCCAAAG...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTTCGAACCAGCTGCTaGAGGAGTGTAGCTTCACAG +
Preference number: 4 (lower is better)
Translates to: STQETQKCSIIFRHHILALRTSC*RSVASQ
Trigger: CTGTGAAGCTACACTCCTCCAGCAGCTGGTTCGAAG...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp CGGAATCTTCAGGATTGGAATCCTTTTGAGAGATACCTACTTCAGCCTCTGGTTGAGGATCATCCACACTaGCACTTGCTCTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: RNLQDWNPFERYLLQPLVEDHPH*HLLWLL
Trigger: TAAAAGCCAGAGCAAGTGCCAGTGTGGATGATCCTC...AACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAAGATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CCA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTATGTGGAATCCTGCCATaGTGCCACGCAGGTATAACA +
Preference number: 4 (lower is better)
Translates to: YSKITQAFRWSMARELALCGILP*CHAGIT
Trigger: TGTTATACCTGCGTGGCACCATGGCAGGATTCCACA...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACGAACGCCAGCCGCAATaGGGCAACTTGAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: TQKCSIIFRHHILALFKYERQPQ*GNLRPR
Trigger: TCTTGGTCTCAAGTTGCCTCATTGCGGCTGGCGTTC...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCTTCTTCCCACAGAGTTaGCAACATCTGTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: TNTADRISPQDYVKFRVFFFPQS*QHLSQH
Trigger: GTGCTGAGACAGATGTTGTCAACTCTGTGGGAAGAA...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp GTCTCTTTTCTTTGGCAGCCTCCAACTGTTGCTTTTCGTAAATGTCCTTCAGATTTCTTCCCACAGAGTTaGCAACATCTGTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: VSFLWQPPTVAFRKCPSDFFPQS*QHLSQH
Trigger: GTGCTGAGACAGATGTTGTCAACTCTGTGGGAAGAA...ATCTGAAGGACATTTACGAAAAGCAACAGTTGGAGGCTGCCAAAGAAAAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR TCA 90 bp GAGGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGGGATTGGAATCCTTTTaGGAGATACCTACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EVQILQIEYHRRTTSSSEGLESF*EIPTSA
Trigger: GGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCC...CTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTACTTTATGTGAACCATTaGTCCCGCCAGCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: YSKITQAFRWSMARELALLYVNH*SRQLEG
Trigger: ACCTTCAAGCTGGCGGGAGCAATGGTTCACATAAAG...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp TGCAGCAAACATGAGGGCTGTGTATCCATGTTCATGCTGATGACAATTTACATCCTTTATGTGAACCATTaGTCCCGCCAGCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: CSKHEGCVSMFMLMTIYILYVNH*SRQLEG
Trigger: ACCTTCAAGCTGGCGGGAGCAATGGTTCACATAAAG...GATGTAAATTGTCATCAGCATGAACATGGATACACAGCCCTCATGTTTGCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR GCA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTGTGGTGATAATTTTGTaGAGCGGGCCTGCCAACTTT +
Preference number: 4 (lower is better)
Translates to: VQILQIEYHRRTTSSSECVVIIL*SGPANF
Trigger: AAAGTTGGCAGGCCCGCTGCACAAAATTATCACCAC...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTGGTAAGGACGGAGAATaGAGTGGGATCAGAACCAAT +
Preference number: 4 (lower is better)
Translates to: VQILQIEYHRRTTSSSECGKDGE*SGIRTN
Trigger: ATTGGTTCTGATCCCACTGCATTCTCCGTCCTTACC...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAATCCACACTGGCACTTaGTCTGGCTTTTACTCCTCA +
Preference number: 4 (lower is better)
Translates to: QILQIEYHRRTTSSSECSIHTGT*SGFYSS
Trigger: TGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGAT...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAAGTTTTCCAGCTTCTTaGAGGGTGAGGATCATCCAC +
Preference number: 4 (lower is better)
Translates to: QILQIEYHRRTTSSSECSSFPAS*RVRIIH
Trigger: GTGGATGATCCTCACCCTGCAAGAAGCTGGAAAACT...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp CATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATGCTGCATGCAGGTGCAGAAGAAGCATaGAGTCACGCTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: HVAVVICTYRVFLYMLHAGAEEA*SHADVT
Trigger: GGTGACATCAGCGTGACTGCATGCTTCTTCTGCACC...TGCATGCAGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CCA 90 bp ACATCGGCTCCATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATAGCTCCTTCTCCTCCTaGGTCAGCTCGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TSAPCRSSNLHISSFPLYSSFSS*VSSPFF
Trigger: AAAGAAAGGCGAGCTGACCCAGGAGGAGAAGGAGCT...ATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATGGAGCCGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CCA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGAATGTTCCAGCTTCTTaGACAGTACCTTTCCCGATG +
Preference number: 4 (lower is better)
Translates to: GTNTADRISPQDYVKFRVNVPAS*TVPFPM
Trigger: CATCGGGAAAGGTACTGTCCAAGAAGCTGGAACATT...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGAGGGATCTGCCATTCTaGAGGTACAAATACTGCAGA +
Preference number: 4 (lower is better)
Translates to: GTNTADRISPQDYVKFRVRDLPF*RYKYCR
Trigger: TCTGCAGTATTTGTACCTCCAGAATGGCAGATCCCT...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp GAGGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGACTCAGGCTTTCAGGTaGAGTATGGCACGTGAATTA +
Preference number: 4 (lower is better)
Translates to: EVQILQIEYHRRTTSSSETQAFR*SMAREL
Trigger: TAATTCACGTGCCATACTCCACCTGAAAGCCTGAGT...CTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAAAGTGCAGCAAACATaGGGGCTGTGTATCCATGTT +
Preference number: 4 (lower is better)
Translates to: TNTADRISPQDYVKFRVFKVQQT*GLCIHV
Trigger: AACATGGATACACAGCCCTCATGTTTGCTGCACTTT...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp TGCAGCAAACATGAGGGCTGTGTATCCATGTTCATGCTGATGACAATTTACATCAAAGTGCAGCAAACATaGGGGCTGTGTATCCATGTT +
Preference number: 4 (lower is better)
Translates to: CSKHEGCVSMFMLMTIYIKVQQT*GLCIHV
Trigger: AACATGGATACACAGCCCTCATGTTTGCTGCACTTT...GATGTAAATTGTCATCAGCATGAACATGGATACACAGCCCTCATGTTTGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR TCA 90 bp CAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCACACAAAGGCTGCCATCTaGGCTGCTGTTCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: QKCSIIFRHHILALFKYHTKAAI*AAVLPT
Trigger: TGTGGGAAGAACAGCAGCTCAGATGGCAGCCTTTGT...GTGGTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp GAGGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGACGATCTTGACAGGATaGAGATTCGTTGTGGTGATA +
Preference number: 4 (lower is better)
Translates to: EVQILQIEYHRRTTSSSETILTG*RFVVVI
Trigger: TATCACCACAACGAATCTTCATCCTGTCAAGATCGT...CTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCCAAGCATCACGATCTTaGCAGGATGAAGATTCGTTG +
Preference number: 4 (lower is better)
Translates to: TNTADRISPQDYVKFRVFQASRS*QDEDSL
Trigger: CAACGAATCTTCATCCTGTCAAGATCGTGATGCTTG...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp CAGGATCATTTCTATATAAAACTACAATTAGCTGAACTATGGCAAAGGTCCTTGCAGCTTCTTGCAGGGTaGGGATCATCCACACTGGCA +
Preference number: 4 (lower is better)
Translates to: QDHFYIKLQLAELWQRSLQLLAG*GSSTLA
Trigger: TGCCAGTGTGGATGATCCTCACCCTGCAAGAAGCTG...CAAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTTATATAGAAATGATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTGCAGGTATAACAAGGTaGGGACAATGCATTCCTAGG +
Preference number: 4 (lower is better)
Translates to: STQETQKCSIIFRHHILAAGITR*GQCIPR
Trigger: CCTAGGAATGCATTGTCCTCACCTTGTTATACCTGC...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCTTTATTACCAGAAAGTaGAGCAAACATGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCFITRK*SKHEGC
Trigger: ACAGCCCTCATGTTTGCTGCACTTTCTGGTAATAAA...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp GAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGGATCATTTCTATATTTTCAACAGGAGCAATaGTTCGAACCAGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: EYHRRTTSSSECSGSFLYFQQEQ*FEPAAG
Trigger: TCCAGCAGCTGGTTCGAAGCATTGCTCCTGTTGAAA...ATATAGAAATGATCCTGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp AGAGATACCTACTTCAGCCTCTGGTTGCTCTTCATTAACACAGTTAGAATTGACGGTAAGGACGGAGAATaGAGTGGGATCAGAACCAAT +
Preference number: 4 (lower is better)
Translates to: RDTYFSLWLLFINTVRIDGKDGE*SGIRTN
Trigger: ATTGGTTCTGATCCCACTGCATTCTCCGTCCTTACC...GTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTATCCACACTGGCACTTaGTCTGGCTTTTACTCCTCA +
Preference number: 4 (lower is better)
Translates to: STQETQKCSIIFRHHILAIHTGT*SGFYSS
Trigger: TGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGAT...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp ACATCAAGTTTGCCGTGGTTTTCCTCTTGTCTCTTTTCTTTGGCAGCCTCCAACTGGTCAACAGGGGTTTaGTTGAAAACCTGTATTCTA +
Preference number: 4 (lower is better)
Translates to: TSSLPWFSSCLFSLAASNWSTGV*LKTCIL
Trigger: TAGAATACAGGTTTTCAAGCAAACCCCTGTTGACCA...GTTGGAGGCTGCCAAAGAAAAGAGACAAGAGGAAAACCACGGCAAACTTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CCA 90 bp CAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCACTCCACAAAACCCACCTaGCCAGTGATGGCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: QKCSIIFRHHILALFKYHSTKPT*PVMAWV
Trigger: TACCCAAGCCATCACTGGCCAGGTGGGTTTTGTGGA...GTGGTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTGAGGATCATCCACACTaGCACTTGCTCTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: STQETQKCSIIFRHHILAEDHPH*HLLWLL
Trigger: TAAAAGCCAGAGCAAGTGCCAGTGTGGATGATCCTC...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTACTCAGGCTTTCAGGTaGAGTATGGCACGTGAATTA +
Preference number: 4 (lower is better)
Translates to: VQILQIEYHRRTTSSSECTQAFR*SMAREL
Trigger: TAATTCACGTGCCATACTCCACCTGAAAGCCTGAGT...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp AAGTGCAGCAAACATGAGGGCTGTGTATCCATGTTCATGCTGATGACAATTTACAATGTTCCAGCTTCTTaGACAGTACGCATCACCATC +
Preference number: 4 (lower is better)
Translates to: KCSKHEGCVSMFMLMTIYNVPAS*TVRITI
Trigger: GATGGTGATGCGTACTGTCCAAGAAGCTGGAACATT...GTAAATTGTCATCAGCATGAACATGGATACACAGCCCTCATGTTTGCTGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
3UTR CAA 72 bp TCAGCCTCTGGTTGCTCTTCATTAACACAGTTAGAATaGACATCAAGTTTGCCGTGGTTTTCCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: SASGCSSLTQLE*TSSLPWFSSCL
Trigger: GAGACAAGAGGAAAACCACGGCAAACTTGATGTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR TCA 90 bp CAGGATCATTTCTATATAAAACTACAATTAGCTGAACTATGGCAAAGGTCCTTGTTGAGACCAAGACACTaGGTAGCCAACCGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: QDHFYIKLQLAELWQRSLLRPRH*VANRGN
Trigger: GTTTCCGCGGTTGGCTACTCAGTGTCTTGGTCTCAA...CAAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTTATATAGAAATGATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAACGATCTTGACAGGATaGAGATTCGTTGTGGTGATA +
Preference number: 4 (lower is better)
Translates to: QILQIEYHRRTTSSSECSTILTG*RFVVVI
Trigger: TATCACCACAACGAATCTTCATCCTGTCAAGATCGT...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp AGAGATACCTACTTCAGCCTCTGGTTGCTCTTCATTAACACAGTTAGAATTGACCAAGCATCACGATCTTaGCAGGATGAAGATTCGTTG +
Preference number: 4 (lower is better)
Translates to: RDTYFSLWLLFINTVRIDQASRS*QDEDSL
Trigger: CAACGAATCTTCATCCTGTCAAGATCGTGATGCTTG...GTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR TCA 90 bp AGAGATACCTACTTCAGCCTCTGGTTGCTCTTCATTAACACAGTTAGAATTGACGGATTGGAATCCTTTTaGGAGATACCTACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RDTYFSLWLLFINTVRIDGLESF*EIPTSA
Trigger: GGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCC...GTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR TCA 90 bp ACATCAAGTTTGCCGTGGTTTTCCTCTTGTCTCTTTTCTTTGGCAGCCTCCAACAAAACCTGTATTCTATaGAATGTGGAATCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TSSLPWFSSCLFSLAASNKTCIL*NVESCH
Trigger: ATGGCAGGATTCCACATTTCATAGAATACAGGTTTT...GTTGGAGGCTGCCAAAGAAAAGAGACAAGAGGAAAACCACGGCAAACTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp CAGGATCATTTCTATATAAAACTACAATTAGCTGAACTATGGCAAAGGTCCTTGGGAATCCTGCCATGGTaGCACGCAGGTATAACAAGG +
Preference number: 4 (lower is better)
Translates to: QDHFYIKLQLAELWQRSLGILPW*HAGITR
Trigger: CCTTGTTATACCTGCGTGGCACCATGGCAGGATTCC...CAAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTTATATAGAAATGATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTTGTCTCTTTTCTTTaGCAGCCTCCAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: STQETQKCSIIFRHHILALVSFL*QPPTVA
Trigger: AGCAACAGTTGGAGGCTGCCAAAGAAAAGAGACAAG...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTGTGGAGTATGGCACGTaGATTAGCCTTACAGTAATT +
Preference number: 4 (lower is better)
Translates to: STQETQKCSIIFRHHILAVEYGT*ISLTVI
Trigger: AATTACTGTAAGGCTAATTCACGTGCCATACTCCAC...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp CGGAATCTTCAGGATTGGAATCCTTTTGAGAGATACCTACTTCAGCCTCTGGTTATACACTTTCTCACATaGTTTCAAAGTTCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: RNLQDWNPFERYLLQPLVIHFLT*FQSSLH
Trigger: GTGCAGAGAACTTTGAAATCATGTGAGAAAGTGTAT...AACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCTGAAGATTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACGCATTTATTCAGGGCTaGTTCTTCTGTCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TQKCSIIFRHHILALFKYAFIQG*FFCQQR
Trigger: CCTCTGCTGACAGAAGAAGCAGCCCTGAATAAATGC...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp CAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCACTTTCAACAGGAGCAATaGTTCGAACCAGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QKCSIIFRHHILALFKYHFQQEQ*FEPAAG
Trigger: TCCAGCAGCTGGTTCGAAGCATTGCTCCTGTTGAAA...GTGGTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTACTTCAGCCTCTGGTTaGTCTTCATTAACACAGTTA +
Preference number: 4 (lower is better)
Translates to: VQILQIEYHRRTTSSSECTSASG*SSLTQL
Trigger: TAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGT...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp GTCTCTTTTCTTTGGCAGCCTCCAACTGTTGCTTTTCGTAAATGTCCTTCAGATACTTCAGCCTCTGGTTaGTCTTCATTAACACAGTTA +
Preference number: 4 (lower is better)
Translates to: VSFLWQPPTVAFRKCPSDTSASG*SSLTQL
Trigger: TAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGT...ATCTGAAGGACATTTACGAAAAGCAACAGTTGGAGGCTGCCAAAGAAAAGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCTGGTCAACAGGGGTTTaGTTGAAAACCTGTATTCTA +
Preference number: 4 (lower is better)
Translates to: TNTADRISPQDYVKFRVFWSTGV*LKTCIL
Trigger: TAGAATACAGGTTTTCAAGCAAACCCCTGTTGACCA...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTACCTACTTCAGCCTCTaGTTGCTCTTCATTAACACA +
Preference number: 4 (lower is better)
Translates to: STQETQKCSIIFRHHILATYFSL*LLFINT
Trigger: TGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGT...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCTACCATTTTGCAAACTaGACATCTTTTACTTGCTCC +
Preference number: 4 (lower is better)
Translates to: TNTADRISPQDYVKFRVFYHFAN*TSFTCS
Trigger: GGAGCAAGTAAAAGATGTTCAGTTTGCAAAATGGTA...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306999.7
CDS-3UTR TCA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTAAAACCTGTATTCTATaGAATGTGGAATCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: VQILQIEYHRRTTSSSECKTCIL*NVESCH
Trigger: ATGGCAGGATTCCACATTTCATAGAATACAGGTTTT...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp TCGTCCAAACAGTTGACACGAACATTCTTGCTGGATAATAATGTTCCAGCTTCTTTTATTACCAGAAAGTaGAGCAAACATGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSKQLTRTFLLDNNVPASFITRK*SKHEGC
Trigger: ACAGCCCTCATGTTTGCTGCACTTTCTGGTAATAAA...AGAAGCTGGAACATTATTATCCAGCAAGAATGTTCGTGTCAACTGTTTGGACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR GCA 90 bp CAGGATCATTTCTATATAAAACTACAATTAGCTGAACTATGGCAAAGGTCCTTGCTTCCACACCTGTTCTaGTTGTCCCTTTGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: QDHFYIKLQLAELWQRSLLPHLF*LSLCSL
Trigger: TAGGGAACAAAGGGACAAGCAGAACAGGTGTGGAAG...CAAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTTATATAGAAATGATCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCACAAGAAACCCAGAAATaGAGCATTATCTTCAGACAT +
Preference number: 4 (lower is better)
Translates to: QILQIEYHRRTTSSSECSQETQK*SIIFRH
Trigger: ATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTG...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACAATGTTCCAGCTTCTTaGACAGTACCTTTCCCGATG +
Preference number: 4 (lower is better)
Translates to: TQKCSIIFRHHILALFKYNVPAS*TVPFPM
Trigger: CATCGGGAAAGGTACTGTCCAAGAAGCTGGAACATT...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACGGACGGAGAATGCAGTaGGATCAGAACCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: TQKCSIIFRHHILALFKYGRRMQ*DQNQFQ
Trigger: TTGAAATTGGTTCTGATCCCACTGCATTCTCCGTCC...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCTTGTCTCTTTTCTTTaGCAGCCTCCAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TQKCSIIFRHHILALFKYLVSFL*QPPTVA
Trigger: AGCAACAGTTGGAGGCTGCCAAAGAAAAGAGACAAG...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
3UTR CAA 72 bp GGAATCCTTTTGAGAGATACCTACTTCAGCCTCTGGTaGCTCTTCATTAACACAGTTAGAATTGACATCAAG +
Preference number: 4 (lower is better)
Translates to: GILLRDTYFSLW*LFINTVRIDIK
Trigger: CTTGATGTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCTCAAAAGGATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR TCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTAAAACTACAATTAGCTaGACTATGGCAAAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: STQETQKCSIIFRHHILAKTTIS*TMAKVL
Trigger: AAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTT...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp AGAGATACCTACTTCAGCCTCTGGTTGCTCTTCATTAACACAGTTAGAATTGACAAAACTACAATTAGCTaGACTATGGCAAAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RDTYFSLWLLFINTVRIDKTTIS*TMAKVL
Trigger: AAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTT...GTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR GCA 90 bp GAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGGATCATTTCTATATGTCGCAGTAGTAATTTaGACATATCGAGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: EYHRRTTSSSECSGSFLYVAVVI*TYRVFL
Trigger: AAGGAAAACTCGATATGTGCAAATTACTACTGCGAC...ATATAGAAATGATCCTGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCACGAACATTCTTGCTaGATAATAATGTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: STQETQKCSIIFRHHILAHEHSC*IIMFQL
Trigger: AAGCTGGAACATTATTATCCAGCAAGAATGTTCGTG...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp TCGGCTCCATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATGCTCACGAACATTCTTGCTaGATAATAATGTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SAPCRSSNLHISSFPLYAHEHSC*IIMFQL
Trigger: AAGCTGGAACATTATTATCCAGCAAGAATGTTCGTG...AGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATGGAGCCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CCA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCTTTTCTTGATACACTaGAAAGCCATCAGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: TQKCSIIFRHHILALFKYLFLIH*KAIRSS
Trigger: CGAGCTTCTGATGGCTTTCCAGTGTATCAAGAAAAG...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp CAGGATCATTTCTATATAAAACTACAATTAGCTGAACTATGGCAAAGGTCCTTGGGACGGAGAATGCAGTaGGATCAGAACCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: QDHFYIKLQLAELWQRSLGRRMQ*DQNQFQ
Trigger: TTGAAATTGGTTCTGATCCCACTGCATTCTCCGTCC...CAAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTTATATAGAAATGATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR TCA 90 bp CAGGATCATTTCTATATAAAACTACAATTAGCTGAACTATGGCAAAGGTCCTTGAAATTTTTCCCTTCCTaGAAATCTCTCTTCCACACC +
Preference number: 4 (lower is better)
Translates to: QDHFYIKLQLAELWQRSLKFFPS*KSLFHT
Trigger: GGTGTGGAAGAGAGATTTTCAGGAAGGGAAAAATTT...CAAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTTATATAGAAATGATCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR GCA 90 bp CAGGATCATTTCTATATAAAACTACAATTAGCTGAACTATGGCAAAGGTCCTTGTTTATTACCAGAAAGTaGAGCAAACATGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QDHFYIKLQLAELWQRSLFITRK*SKHEGC
Trigger: ACAGCCCTCATGTTTGCTGCACTTTCTGGTAATAAA...CAAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTTATATAGAAATGATCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CCA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCACGAACATTCTTGCTaGATAATAATGTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TQKCSIIFRHHILALFKYHEHSC*IIMFQL
Trigger: AAGCTGGAACATTATTATCCAGCAAGAATGTTCGTG...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS CCA 90 bp AGCCAACCGCGGAAACGCTTCGCTTCTCTCCTCCCTCCCGCGGGCTaGCGGACAGCGGGCGAGCTCGGGCGAGCCAGGCGGACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SQPRKRFASLLPPAG*RTAGELGRARRTVS
Trigger: GGAGACCGTCCGCCTGGCTCGCCCGAGCTCGCCCGCTGTCCGCCAGCCCGCGGGAGGGAGGAGAGAAGCGAAGCGTTTCCGCGGTTGGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421746.1
ENST00000628652.1
CDS CCA 90 bp GCTGATGTCACCTGCCAGGTAACGGGACTCGGCAGGGAACTCCTCTaGGACGTCCACTCGGGGACTCCGGGGAAATATGGCTTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ADVTCQVTGLGRELL*DVHSGTPGKYGFWL
Trigger: GAGCCAGAAGCCATATTTCCCCGGAGTCCCCGAGTGGACGTCCCAGAGGAGTTCCCTGCCGAGTCCCGTTACCTGGCAGGTGACATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453623.5
ENST00000627859.1
CDS GCA 90 bp CACCGTGAGGGTGCAGAAGAAGCATGCAGTCACGCTGATGTCACCTaGCAGGTAACGGGACTCGGCAGGGAACTCCTCTGGGACGTCCAC +
Preference number: 5 (lower is better)
Translates to: HREGAEEACSHADVT*QVTGLGRELLWDVH
Trigger: GTGGACGTCCCAGAGGAGTTCCCTGCCGAGTCCCGTTACCTGGCAGGTGACATCAGCGTGACTGCATGCTTCTTCTGCACCCTCACGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS CCA 90 bp TTGGACAGTACCTGCCAGGTAACGGGACTCGGCAGGGAACTCCTCTaGGACGTCCACTCGGGGACTCCGGGGAAATATGGCTTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LDSTCQVTGLGRELL*DVHSGTPGKYGFWL
Trigger: GAGCCAGAAGCCATATTTCCCCGGAGTCCCCGAGTGGACGTCCCAGAGGAGTTCCCTGCCGAGTCCCGTTACCTGGCAGGTACTGTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421746.1
CDS-3UTR CAA 90 bp CATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCGCGGGCCTGCCAACTTaGGGGGCAGTTTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: HPHWHLLWLLLLRHLWPCAGLPT*GAVLAL
Trigger: AAGAGCCAAAACTGCCCCCAAAGTTGGCAGGCCCGC...GCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CAA 90 bp CATCCACACTGGCACTTGCTCTGGCTTTTACTCCTCAGACACCTGTGGCCCTGCCTGAACATCTTTTACTaGCTCCCTTTTCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: HPHWHLLWLLLLRHLWPCLNIFY*LPFLHR
Trigger: CCTGTGGAGAAAAGGGAGCAAGTAAAAGATGTTCAG...GCAGGGCCACAGGTGTCTGAGGAGTAAAAGCCAGAGCAAGTGCCAGTGTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS TCA 90 bp TCCAGTAGCTCCTTCTCCTCCTGGGTCAGCTCGCCTTTCTTTATGTaGACCATTGCTCCCGCCAGCTTGAAGGTTATTCCCTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: SSSSFSSWVSSPFFM*TIAPASLKVIPFLR
Trigger: CCTAAGAAAGGGAATAACCTTCAAGCTGGCGGGAGCAATGGTTCACATAAAGAAAGGCGAGCTGACCCAGGAGGAGAAGGAGCTACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306999.7
ENST00000421746.1
ENST00000447802.3
ENST00000453623.5
ENST00000628652.1
CDS GCA 90 bp TATGGTCACACAATCATGTTGACCCACAAAGGCTGCCATCTGAGCTaGTGTTCTTCCCACAGAGTTGACAACATCTGTCTCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: YGHTIMLTHKGCHLS*CSSHRVDNICLSTS
Trigger: GCTGGTGCTGAGACAGATGTTGTCAACTCTGTGGGAAGAACAGCAGCTCAGATGGCAGCCTTTGTGGGTCAACATGATTGTGTGACCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306999.7
ENST00000447802.3
ENST00000628652.1
CDS-3UTR CAA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTAGCGGGCCTGCCAACTTaGGGGGCAGTTTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: YSKITQAFRWSMARELALAGLPT*GAVLAL
Trigger: AAGAGCCAAAACTGCCCCCAAAGTTGGCAGGCCCGC...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGCTGGCCAGTGATGGCTaGGGTAAGGACGGAGAATGC +
Preference number: 5 (lower is better)
Translates to: GTNTADRISPQDYVKFRVLASDG*GKDGEC
Trigger: GCATTCTCCGTCCTTACCCAAGCCATCACTGGCCAG...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS CCA 90 bp GTGCAAAATTCCACATCCACAAAACCCACCTGGCCAGTGATGGCTTaGGTAAGGACGGAGAATGCAGTGGGATCAGAACCAATTTCAACA +
Preference number: 5 (lower is better)
Translates to: VQNSTSTKPTWPVMA*VRTENAVGSEPIST
Trigger: TGTTGAAATTGGTTCTGATCCCACTGCATTCTCCGTCCTTACCCAAGCCATCACTGGCCAGGTGGGTTTTGTGGATGTGGAATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306999.7
ENST00000447802.3
ENST00000628652.1
CDS-3UTR CAA 90 bp TGCAGCAAACATGAGGGCTGTGTATCCATGTTCATGCTGATGACAATTTACATCAACGATGCGTCTGTATaGGGAACGCCAGCCGCAATG +
Preference number: 5 (lower is better)
Translates to: CSKHEGCVSMFMLMTIYINDASV*GTPAAM
Trigger: CATTGCGGCTGGCGTTCCCAATACAGACGCATCGTT...GATGTAAATTGTCATCAGCATGAACATGGATACACAGCCCTCATGTTTGCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CAA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCGGTCACACAATCATGTaGACCCACAAAGGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCGHTIM*THKGCH
Trigger: ATGGCAGCCTTTGTGGGTCAACATGATTGTGTGACC...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCACTTTGGGGGCAGTTTaGGCTCTTTATCCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCTLGAV*ALYPVP
Trigger: AGGGACTGGATAAAGAGCCAAAACTGCCCCCAAAGT...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGGCCAGTGATGGCTaGGGTAAGGACGGAGAATGC +
Preference number: 5 (lower is better)
Translates to: STQETQKCSIIFRHHILALASDG*GKDGEC
Trigger: GCATTCTCCGTCCTTACCCAAGCCATCACTGGCCAG...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCGCCGTGGTTTTCCTCTaGTCTCTTTTCTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCAVVFL*SLFFGS
Trigger: GCTGCCAAAGAAAAGAGACAAGAGGAAAACCACGGC...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp TCCACACAAGAAACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTAACGATGCGTCTGTATaGGGAACGCCAGCCGCAATG +
Preference number: 5 (lower is better)
Translates to: STQETQKCSIIFRHHILANDASV*GTPAAM
Trigger: CATTGCGGCTGGCGTTCCCAATACAGACGCATCGTT...AGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGTTTCTTGTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCGTTCTTCCCACAGAGTaGACAACATCTGTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCVLPTE*TTSVSA
Trigger: TGCTGAGACAGATGTTGTCAACTCTGTGGGAAGAAC...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTGTTGTGGTGATAATTTaGTGCAGCGGGCCTGCCAAC +
Preference number: 5 (lower is better)
Translates to: VQILQIEYHRRTTSSSECVVVII*CSGPAN
Trigger: GTTGGCAGGCCCGCTGCACAAAATTATCACCACAAC...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGTTGTGGTGATAATTTaGTGCAGCGGGCCTGCCAAC +
Preference number: 5 (lower is better)
Translates to: QILQIEYHRRTTSSSECSVVVII*CSGPAN
Trigger: GTTGGCAGGCCCGCTGCACAAAATTATCACCACAAC...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGACCGTCAATATGCCTTaGTTCCTGCTGAGGGATCTG +
Preference number: 5 (lower is better)
Translates to: GTNTADRISPQDYVKFRVTVNMP*FLLRDL
Trigger: CAGATCCCTCAGCAGGAACAAAGGCATATTGACGGT...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGATTGCTCCCGCCAGCTaGAAGGTTATTCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: GTNTADRISPQDYVKFRVIAPAS*KVIPFL
Trigger: AAGAAAGGGAATAACCTTCAAGCTGGCGGGAGCAAT...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCACTTTGGGGGCAGTTTaGGCTCTTTATCCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: TNTADRISPQDYVKFRVFTLGAV*ALYPVP
Trigger: AGGGACTGGATAAAGAGCCAAAACTGCCCCCAAAGT...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTCTTGTCTCTTTTCTTaGGCAGCCTCCAACTGTTGC +
Preference number: 5 (lower is better)
Translates to: GTNTADRISPQDYVKFRVSCLFS*AASNCC
Trigger: GCAACAGTTGGAGGCTGCCAAAGAAAAGAGACAAGA...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTAGCCGTGGTTTTCCTCTaGTCTCTTTTCTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: YSKITQAFRWSMARELALAVVFL*SLFFGS
Trigger: GCTGCCAAAGAAAAGAGACAAGAGGAAAACCACGGC...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTGAGTTTTCCAGCTTCTaGCAGGGTGAGGATCATCCA +
Preference number: 5 (lower is better)
Translates to: VQILQIEYHRRTTSSSECEFSSF*QGEDHP
Trigger: TGGATGATCCTCACCCTGCAAGAAGCTGGAAAACTC...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCACCACACCTGTTCTGCTaGTCCCTTTGTTCCCTAAAG +
Preference number: 5 (lower is better)
Translates to: QILQIEYHRRTTSSSECSPHLFC*SLCSLK
Trigger: CTTTAGGGAACAAAGGGACAAGCAGAACAGGTGTGG...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCACAACGATGCGTCTGTATaGGGAACGCCAGCCGCAATG +
Preference number: 5 (lower is better)
Translates to: QKCSIIFRHHILALFKYHNDASV*GTPAAM
Trigger: CATTGCGGCTGGCGTTCCCAATACAGACGCATCGTT...GTGGTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCTCGTCCAAACAGTaGACACGAACATTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GTNTADRISPQDYVKFRVFSSKQ*TRTFLL
Trigger: CAGCAAGAATGTTCGTGTCAACTGTTTGGACGAGAA...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCGTTCTTCCCACAGAGTaGACAACATCTGTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: TNTADRISPQDYVKFRVFVLPTE*TTSVSA
Trigger: TGCTGAGACAGATGTTGTCAACTCTGTGGGAAGAAC...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGGATCATTTCTATATGGTCACACAATCATGTaGACCCACAAAGGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: EYHRRTTSSSECSGSFLYGHTIM*THKGCH
Trigger: ATGGCAGCCTTTGTGGGTCAACATGATTGTGTGACC...ATATAGAAATGATCCTGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCGGCAGCCTCCAACTGTaGCTTTTCGTAAATGTCCTT +
Preference number: 5 (lower is better)
Translates to: TNTADRISPQDYVKFRVFGSLQL*LFVNVL
Trigger: AAGGACATTTACGAAAAGCAACAGTTGGAGGCTGCC...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTATCTTGTCTCTTTTCTTaGGCAGCCTCCAACTGTTGC +
Preference number: 5 (lower is better)
Translates to: YSKITQAFRWSMARELALSCLFS*AASNCC
Trigger: GCAACAGTTGGAGGCTGCCAAAGAAAAGAGACAAGA...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGGATCATTTCTATATACCGTCAATATGCCTTaGTTCCTGCTGAGGGATCTG +
Preference number: 5 (lower is better)
Translates to: EYHRRTTSSSECSGSFLYTVNMP*FLLRDL
Trigger: CAGATCCCTCAGCAGGAACAAAGGCATATTGACGGT...ATATAGAAATGATCCTGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTTCTCGTCCAAACAGTaGACACGAACATTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VQILQIEYHRRTTSSSECFSSKQ*TRTFLL
Trigger: CAGCAAGAATGTTCGTGTCAACTGTTTGGACGAGAA...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp AGAGATACCTACTTCAGCCTCTGGTTGCTCTTCATTAACACAGTTAGAATTGACGGCAGCCTCCAACTGTaGCTTTTCGTAAATGTCCTT +
Preference number: 5 (lower is better)
Translates to: RDTYFSLWLLFINTVRIDGSLQL*LFVNVL
Trigger: AAGGACATTTACGAAAAGCAACAGTTGGAGGCTGCC...GTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CAA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGGAATTGACATCAAGTTaGCCGTGGTTTTCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: GTNTADRISPQDYVKFRVELTSS*PWFSSC
Trigger: ACAAGAGGAAAACCACGGCAAACTTGATGTCAATTC...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGAGGATTGGAATCCTTTaGAGAGATACCTACTTCAGC +
Preference number: 5 (lower is better)
Translates to: GTNTADRISPQDYVKFRVRIGIL*RDTYFS
Trigger: GCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCT...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTGTTCTGCTTGTCCCTTaGTTCCCTAAAGCCTGTATT +
Preference number: 5 (lower is better)
Translates to: VQILQIEYHRRTTSSSECVLLVP*FPKACI
Trigger: AATACAGGCTTTAGGGAACAAAGGGACAAGCAGAAC...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp AATATGCCTTTGTTCCTGCTGAGGGATCTGCCATTCTGGAGGTACAAATACTGCTTGACACGAACATTCTaGCTGGATAATAATGTTCCA +
Preference number: 5 (lower is better)
Translates to: NMPLFLLRDLPFWRYKYCLTRTF*LDNNVP
Trigger: TGGAACATTATTATCCAGCAAGAATGTTCGTGTCAA...GCAGTATTTGTACCTCCAGAATGGCAGATCCCTCAGCAGGAACAAAGGCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTGTCGCAGTAGTAATTaGCACATATCGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: GTNTADRISPQDYVKFRVCRSSN*HISSFP
Trigger: AGGAAAACTCGATATGTGCAAATTACTACTGCGACA...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp ACATCAAGTTTGCCGTGGTTTTCCTCTTGTCTCTTTTCTTTGGCAGCCTCCAACTCTCGAGGAAAGAAATaGTTGATTATGGTCACACAA +
Preference number: 5 (lower is better)
Translates to: TSSLPWFSSCLFSLAASNSRGKK*LIMVTQ
Trigger: TTGTGTGACCATAATCAACAATTTCTTTCCTCGAGA...GTTGGAGGCTGCCAAAGAAAAGAGACAAGAGGAAAACCACGGCAAACTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CAA 90 bp TATAGCAAGATAACTCAGGCTTTCAGGTGGAGTATGGCACGTGAATTAGCCTTAGAATTGACATCAAGTTaGCCGTGGTTTTCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: YSKITQAFRWSMARELALELTSS*PWFSSC
Trigger: ACAAGAGGAAAACCACGGCAAACTTGATGTCAATTC...TAAGGCTAATTCACGTGCCATACTCCACCTGAAAGCCTGAGTTATCTTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GAGGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGGGGATCTATTTTCCTTaGAAACAATTGCTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: EVQILQIEYHRRTTSSSEGIYFP*KQLLES
Trigger: GCTTTCCAGCAATTGTTTCAAAGGAAAATAGATCCC...CTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp AGAGATACCTACTTCAGCCTCTGGTTGCTCTTCATTAACACAGTTAGAATTGACGTTCTGCTTGTCCCTTaGTTCCCTAAAGCCTGTATT +
Preference number: 5 (lower is better)
Translates to: RDTYFSLWLLFINTVRIDVLLVP*FPKACI
Trigger: AATACAGGCTTTAGGGAACAAAGGGACAAGCAGAAC...GTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CAA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCCTATGGCAAAGGTCCTaGAACATAAAGCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: TNTADRISPQDYVKFRVFLWQRS*NIKPFF
Trigger: GAAGAAAGGCTTTATGTTCAAGGACCTTTGCCATAG...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCACATTGCTCCCGCCAGCTaGAAGGTTATTCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: QKCSIIFRHHILALFKYHIAPAS*KVIPFL
Trigger: AAGAAAGGGAATAACCTTCAAGCTGGCGGGAGCAAT...GTGGTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GGTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTGACACGAACATTCTaGCTGGATAATAATGTTCCA +
Preference number: 5 (lower is better)
Translates to: GTNTADRISPQDYVKFRVLTRTF*LDNNVP
Trigger: TGGAACATTATTATCCAGCAAGAATGTTCGTGTCAA...CACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CATTCTTGCTGGATAATAATGTTCCAGCTTCTTGGACAGTACGCATCACCATCCTTGACACGAACATTCTaGCTGGATAATAATGTTCCA +
Preference number: 5 (lower is better)
Translates to: HSCWIIMFQLLGQYASPSLTRTF*LDNNVP
Trigger: TGGAACATTATTATCCAGCAAGAATGTTCGTGTCAA...GGATGGTGATGCGTACTGTCCAAGAAGCTGGAACATTATTATCCAGCAAGAATG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CAA 90 bp CATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATGCTGCATGCATTCTCGTCCAAACAGTaGACACGAACATTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: HVAVVICTYRVFLYMLHAFSSKQ*TRTFLL
Trigger: CAGCAAGAATGTTCGTGTCAACTGTTTGGACGAGAA...TGCATGCAGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CAA 90 bp CGGCTCCATGTCGCAGTAGTAATTTGCACATATCGAGTTTTCCTTTATATGCTGTGTCGCAGTAGTAATTaGCACATATCGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: RLHVAVVICTYRVFLYMLCRSSN*HISSFP
Trigger: AGGAAAACTCGATATGTGCAAATTACTACTGCGACA...CAGCATATAAAGGAAAACTCGATATGTGCAAATTACTACTGCGACATGGAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS-3UTR CAA 90 bp ACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCTTAACACAGTTAGAATaGACATCAAGTTTGCCGTGG +
Preference number: 5 (lower is better)
Translates to: TNTADRISPQDYVKFRVFLTQLE*TSSLPW
Trigger: CCACGGCAAACTTGATGTCAATTCTAACTGTGTTAA...GAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCATTAACACAGTTAGAATaGACATCAAGTTTGCCGTGG +
Preference number: 5 (lower is better)
Translates to: QILQIEYHRRTTSSSECSLTQLE*TSSLPW
Trigger: CCACGGCAAACTTGATGTCAATTCTAACTGTGTTAA...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp GAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGGATCATTTCTATATTACTTCAGCCTCTGGTaGCTCTTCATTAACACAGTT +
Preference number: 5 (lower is better)
Translates to: EYHRRTTSSSECSGSFLYYFSLW*LFINTV
Trigger: AACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTA...ATATAGAAATGATCCTGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CAGGATCATTTCTATATAAAACTACAATTAGCTGAACTATGGCAAAGGTCCTTGCCACACCTGTTCTGCTaGTCCCTTTGTTCCCTAAAG +
Preference number: 5 (lower is better)
Translates to: QDHFYIKLQLAELWQRSLPHLFC*SLCSLK
Trigger: CTTTAGGGAACAAAGGGACAAGCAGAACAGGTGTGG...CAAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTTATATAGAAATGATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS GCA 90 bp TTTCTCACAAATCAAATCCATCACTCTGTAGCATTTATTCAGGGCTaGTTCTTCTGTCAGCAGAGGATTCTCATTTACAAGCATCACGAT +
Preference number: 5 (lower is better)
Translates to: FLTNQIHHSVAFIQG*FFCQQRILIYKHHD
Trigger: ATCGTGATGCTTGTAAATGAGAATCCTCTGCTGACAGAAGAAGCAGCCCTGAATAAATGCTACAGAGTGATGGATTTGATTTGTGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306999.7
ENST00000447802.3
ENST00000628652.1
CDS-3UTR CAA 90 bp GTACAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTCGAGGAAAGAAATTGTaGATTATGGTCACACAATCA +
Preference number: 5 (lower is better)
Translates to: VQILQIEYHRRTTSSSECRGKKL*IMVTQS
Trigger: TGATTGTGTGACCATAATCAACAATTTCTTTCCTCG...ACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CAAATACTGCAGATAGAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCACCTTTTAACAAGCTTTaGATCAAGGTGTCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: QILQIEYHRRTTSSSECSPFNKL*IKVSSL
Trigger: TAAACTGGACACCTTGATCAAAAGCTTGTTAAAAGG...TGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTCTATCTGCAGTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCTGAACATCTTTTACTaGCTCCCTTTTCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: TQKCSIIFRHHILALFKYLNIFY*LPFLHR
Trigger: CCTGTGGAGAAAAGGGAGCAAGTAAAAGATGTTCAG...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp AGAGATACCTACTTCAGCCTCTGGTTGCTCTTCATTAACACAGTTAGAATTGACGGGATCTATTTTCCTTaGAAACAATTGCTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: RDTYFSLWLLFINTVRIDGIYFP*KQLLES
Trigger: GCTTTCCAGCAATTGTTTCAAAGGAAAATAGATCCC...GTCAATTCTAACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTAGGTATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447802.3
CDS-3UTR CAA 90 bp GAATATCACCGCAGGACTACGTCAAGTTCAGAGTGTTCAGGATCATTTCTATATCGAGGAAAGAAATTGTaGATTATGGTCACACAATCA +
Preference number: 5 (lower is better)
Translates to: EYHRRTTSSSECSGSFLYRGKKL*IMVTQS
Trigger: TGATTGTGTGACCATAATCAACAATTTCTTTCCTCG...ATATAGAAATGATCCTGAACACTCTGAACTTGACGTAGTCCTGCGGTGATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCACTACTTCAGCCTCTGGTaGCTCTTCATTAACACAGTT +
Preference number: 5 (lower is better)
Translates to: QKCSIIFRHHILALFKYHYFSLW*LFINTV
Trigger: AACTGTGTTAATGAAGAGCAACCAGAGGCTGAAGTA...GTGGTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CAGGATCATTTCTATATAAAACTACAATTAGCTGAACTATGGCAAAGGTCCTTGAGGATTGGAATCCTTTaGAGAGATACCTACTTCAGC +
Preference number: 5 (lower is better)
Translates to: QDHFYIKLQLAELWQRSLRIGIL*RDTYFS
Trigger: GCTGAAGTAGGTATCTCTCAAAAGGATTCCAATCCT...CAAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTTATATAGAAATGATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CAGGATCATTTCTATATAAAACTACAATTAGCTGAACTATGGCAAAGGTCCTTGTGTCGCAGTAGTAATTaGCACATATCGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: QDHFYIKLQLAELWQRSLCRSSN*HISSFP
Trigger: AGGAAAACTCGATATGTGCAAATTACTACTGCGACA...CAAGGACCTTTGCCATAGTTCAGCTAATTGTAGTTTTATATAGAAATGATCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp CAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCACTCTCGAGGAAAGAAATaGTTGATTATGGTCACACAA +
Preference number: 5 (lower is better)
Translates to: QKCSIIFRHHILALFKYHSRGKK*LIMVTQ
Trigger: TTGTGTGACCATAATCAACAATTTCTTTCCTCGAGA...GTGGTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS-3UTR CAA 90 bp ACCCAGAAATGCAGCATTATCTTCAGACATCACATTCTAGCTCTGTTTAAATACCCTTTTAACAAGCTTTaGATCAAGGTGTCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: TQKCSIIFRHHILALFKYPFNKL*IKVSSL
Trigger: TAAACTGGACACCTTGATCAAAAGCTTGTTAAAAGG...GTATTTAAACAGAGCTAGAATGTGATGTCTGAAGATAATGCTGCATTTCTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306999.7
ENST00000447802.3
CDS CCA 72 bp CGGAAACGCTTCGCTTCTCTCCTCCCTCCCGCGGGCTaGCGGACAGCGGGCGAGCTCGGGCGAGCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: RKRFASLLPPAG*RTAGELGRARR
Trigger: CCGCCTGGCTCGCCCGAGCTCGCCCGCTGTCCGCCAGCCCGCGGGAGGGAGGAGAGAAGCGAAGCGTTTCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421746.1
ENST00000628652.1
CDS CCA 72 bp ACCTGCCAGGTAACGGGACTCGGCAGGGAACTCCTCTaGGACGTCCACTCGGGGACTCCGGGGAAATATGGC +
Preference number: 6 (lower is better)
Translates to: TCQVTGLGRELL*DVHSGTPGKYG
Trigger: GCCATATTTCCCCGGAGTCCCCGAGTGGACGTCCCAGAGGAGTTCCCTGCCGAGTCCCGTTACCTGGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421746.1
ENST00000453623.5
ENST00000627859.1
CDS GCA 72 bp GGTGCAGAAGAAGCATGCAGTCACGCTGATGTCACCTaGCAGGTAACGGGACTCGGCAGGGAACTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: GAEEACSHADVT*QVTGLGRELLW
Trigger: CCAGAGGAGTTCCCTGCCGAGTCCCGTTACCTGGCAGGTGACATCAGCGTGACTGCATGCTTCTTCTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS GCA 72 bp TGTTCCAGCTTCTTGGACAGTACGCATCACCATCCCTaGACCGTGAGGGTGCAGAAGAAGCATGCAGTCACG +
Preference number: 6 (lower is better)
Translates to: CSSFLDSTHHHP*TVRVQKKHAVT
Trigger: CGTGACTGCATGCTTCTTCTGCACCCTCACGGTGCAGGGATGGTGATGCGTACTGTCCAAGAAGCTGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453623.5
CDS TCA 72 bp TCCTTCTCCTCCTGGGTCAGCTCGCCTTTCTTTATGTaGACCATTGCTCCCGCCAGCTTGAAGGTTATTCCC +
Preference number: 6 (lower is better)
Translates to: SFSSWVSSPFFM*TIAPASLKVIP
Trigger: GGGAATAACCTTCAAGCTGGCGGGAGCAATGGTTCACATAAAGAAAGGCGAGCTGACCCAGGAGGAGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306999.7
ENST00000421746.1
ENST00000447802.3
ENST00000453623.5
ENST00000628652.1
CDS CAA 90 bp AGTGCAAAATTCCACATCCACAAAACCCACCTGGCCAGTGATGGCTaGGGTAAGGACGGAGAATGCAGTGGGATCAGAACCAATTTCAAC +
Preference number: 6 (lower is better)
Translates to: SAKFHIHKTHLASDG*GKDGECSGIRTNFN
Trigger: GTTGAAATTGGTTCTGATCCCACTGCATTCTCCGTCCTTACCCAAGCCATCACTGGCCAGGTGGGTTTTGTGGATGTGGAATTTTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306999.7
ENST00000447802.3
ENST00000628652.1
CDS TCA 72 bp AGGCTGCCATCTGAGCTGCTGTTCTTCCCACAGAGTTaGCAACATCTGTCTCAGCACCAGCTTCTAACATTA +
Preference number: 6 (lower is better)
Translates to: RLPSELLFFPQS*QHLSQHQLLTL
Trigger: TAATGTTAGAAGCTGGTGCTGAGACAGATGTTGTCAACTCTGTGGGAAGAACAGCAGCTCAGATGGCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306999.7
ENST00000447802.3
ENST00000628652.1
CDS GCA 72 bp ACAATCATGTTGACCCACAAAGGCTGCCATCTGAGCTaGTGTTCTTCCCACAGAGTTGACAACATCTGTCTC +
Preference number: 6 (lower is better)
Translates to: TIMLTHKGCHLS*CSSHRVDNICL
Trigger: GAGACAGATGTTGTCAACTCTGTGGGAAGAACAGCAGCTCAGATGGCAGCCTTTGTGGGTCAACATGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306999.7
ENST00000447802.3
ENST00000628652.1
CDS CAA 90 bp AGAGGAGTCATTCCATTCTCGTCCAAACAGTTGACACGAACATTCTaGCTGGATAATAATGTTCCAGCTTCTTGGACAGTACCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: RGVIPFSSKQLTRTF*LDNNVPASWTVPAR
Trigger: CCTGGCAGGTACTGTCCAAGAAGCTGGAACATTATTATCCAGCAAGAATGTTCGTGTCAACTGTTTGGACGAGAATGGAATGACTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421746.1
CDS CAA 90 bp AGAGGAGTCATTCCATTCTCGTCCAAACAGTTGACACGAACATTCTaGCTGGATAATAATGTTCCAGCTTCTTGGACAGTACCTTTCCCG +
Preference number: 6 (lower is better)
Translates to: RGVIPFSSKQLTRTF*LDNNVPASWTVPFP
Trigger: CGGGAAAGGTACTGTCCAAGAAGCTGGAACATTATTATCCAGCAAGAATGTTCGTGTCAACTGTTTGGACGAGAATGGAATGACTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306999.7
ENST00000447802.3
ENST00000628652.1
CDS GCA 72 bp AATCAAATCCATCACTCTGTAGCATTTATTCAGGGCTaGTTCTTCTGTCAGCAGAGGATTCTCATTTACAAG +
Preference number: 6 (lower is better)
Translates to: NQIHHSVAFIQG*FFCQQRILIYK
Trigger: CTTGTAAATGAGAATCCTCTGCTGACAGAAGAAGCAGCCCTGAATAAATGCTACAGAGTGATGGATTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306999.7
ENST00000447802.3
ENST00000628652.1
CDS CAA 90 bp GCTTATGTAATGCATCTTCATAGCCAATACTTCATTCATGTCTCTTaGCTTCATACATTTCTCACAAATCAAATCCATCACTCTGTAGCA +
Preference number: 6 (lower is better)
Translates to: AYVMHLHSQYFIHVS*LHTFLTNQIHHSVA
Trigger: TGCTACAGAGTGATGGATTTGATTTGTGAGAAATGTATGAAGCAAAGAGACATGAATGAAGTATTGGCTATGAAGATGCATTACATAAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306999.7
ENST00000447802.3
ENST00000628652.1