RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKLE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000160117

Ensembl transcript IDs: ENST00000394458.7, ENST00000404085.7, ENST00000404261.9, ENST00000594072.6, ENST00000596099.1, ENST00000596626.1, ENST00000596834.1, ENST00000598347.2, ENST00000601401.5, ENST00000651416.1, ENST00000652132.1

Found 651 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCAGGTGCACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTaGCACCACTCCATAGCAGTGCCCTTGCTTCTGGTTGGTGAGCGT +
Preference number: 1 (lower is better)
Translates to: QQVHPQAPATSRWPA*HHSIAVPLLLVGER
Trigger: ACGCTCACCAACCAGAAGCAAGGGCACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR CCA 90 bp CGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTaGCCCAGATGTCCAAGATCTGACGCACCTTGGGGCAGGCCTGGT +
Preference number: 1 (lower is better)
Translates to: RPRAGSNVGTQHRNH*PRCPRSDAPWGRPG
Trigger: ACCAGGCCTGCCCCAAGGTGCGTCAGATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR CCA 90 bp AATGAGGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTGGTaGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAGCAGG +
Preference number: 1 (lower is better)
Translates to: NEDDQRSLLSPSWYW*VLAGFFTATCFISR
Trigger: CCTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR CCA 90 bp AGCAATGAGGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTaGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAGC +
Preference number: 1 (lower is better)
Translates to: SNEDDQRSLLSPSWY*WVLAGFFTATCFIS
Trigger: GCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR CCA 90 bp GAGTGTAGCAATGAGGACGACCAGAGGTCACTCTTGTCGCCATCTTaGTATTGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTT +
Preference number: 1 (lower is better)
Translates to: ECSNEDDQRSLLSPS*YWWVLAGFFTATCF
Trigger: AAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATTGCTACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR GCA 90 bp CTTGTCGCCATCTTGGTATTGGTGGGTTTTGGCCGGCTTCTTTACTaGAACCTGTTTTATCAGCAGGTTCTTTATGACCCGTTATCTTGT +
Preference number: 1 (lower is better)
Translates to: LVAILVLVGFGRLLY*NLFYQQVLYDPLSC
Trigger: ACAAGATAACGGGTCATAAAGAACCTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATGGCGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR CCA 90 bp TGGCTACTCCATAGACAGGGCAGGGCTGCTGGTTGCCCATTTTTATaGTTATTTCTTGATGATATGCTAAACAAGGGGTGGATTATTCAT +
Preference number: 1 (lower is better)
Translates to: WLLHRQGRAAGCPFL*LFLDDMLNKGWIIH
Trigger: ATGAATAATCCACCCCTTGTTTAGCATATCATCAAGAAATAACCATAAAAATGGGCAACCAGCAGCCCTGCCCTGTCTATGGAGTAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR-3UTR TCA 90 bp CCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAGCAGTGGTGGGGCTGTTTTCTTaGCCGCCCATGGTGACCAAG +
Preference number: 2 (lower is better)
Translates to: PQAPATSRWPACHHSIAVVGLFS*PPMVTK
Trigger: CTTGGTCACCATGGGCGGTCAAGAAAACAGCCCCAC...CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR-3UTR CCA 90 bp GGTGCACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATACAGCGACCACGTGCTaGAAGCAATGTAGGGACACA +
Preference number: 2 (lower is better)
Translates to: GAPPSAGDEQVASLPPLHTATTC*KQCRDT
Trigger: TGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGT...ATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR-3UTR TCA 90 bp CTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTGCTGGACTTGACCGCCCATGGTaGCCAAGGGCCTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: LPQYTPPVYKPPQRPRAGLDRPW*PRASQR
Trigger: CCTCTGGGAGGCCCTTGGTCACCATGGGCGGTCAAG...TCCAGCACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR-3UTR CCA 90 bp CTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTGCTGGAAGATCTGACGCACCTTaGGGCAGGCCTGGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LPQYTPPVYKPPQRPRAGRSDAP*GRPGGA
Trigger: AGCCCCACCAGGCCTGCCCCAAGGTGCGTCAGATCT...TCCAGCACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR-3UTR TCA 90 bp CTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTGCTGGACAGATGTCCAAGATCTaGCGCACCTTGGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: LPQYTPPVYKPPQRPRAGQMSKI*RTLGQA
Trigger: GGCCTGCCCCAAGGTGCGTCAGATCTTGGACATCTG...TCCAGCACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR-3UTR CCA 90 bp AGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACGGGCTGCTGTCAGCATaGGGCAGCTGGAACATTCAA +
Preference number: 2 (lower is better)
Translates to: SPLSAWGRSAWVLPTHTHGLLSA*GSWNIQ
Trigger: TTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC...GTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
3UTR-3UTR CCA 90 bp ACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTTGGGGCAGGCCTGGTaGGGCTGTTTTCTTGACCGC +
Preference number: 2 (lower is better)
Translates to: TTCWKQCRDTTPQPLAQMLGQAW*GCFLDR
Trigger: GCGGTCAAGAAAACAGCCCCACCAGGCCTGCCCCAA...CATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR-3UTR GCA 90 bp TCTGGATCCCTAGGGCTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGGGGCCCTCGTCCCTTTaGCCACGTAGAAGATGGCAC +
Preference number: 2 (lower is better)
Translates to: SGSLGLPQYTPPVYKPPQGPSSL*PRRRWH
Trigger: GTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCC...CTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAGCCCTAGGGATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR-3UTR CCA 90 bp GTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACATTTCTCCCCAGGCTaGATGGCCAACTCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: VTKSSLSLGEICLGAPYTHFSPG*MANSPA
Trigger: TGCTGGGGAGTTGGCCATCCAGCCTGGGGAGAAATG...TGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
3UTR-3UTR CCA 90 bp GGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTGGTGGGTTTTGGCCGGTGGGGGAGATCTGCCTaGGTGCTCCCTACACACACA +
Preference number: 2 (lower is better)
Translates to: GRPEVTLVAILVLVGFGRWGRSA*VLPTHT
Trigger: TGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCA...CCGGCCAAAACCCACCAATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR-3UTR TCA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCACACACACCCCTTCTaGAACCAGAGATGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYHTHPF*NQRWGL
Trigger: CAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTG...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
3UTR-3UTR CCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTAGTCCTCTCTCAGCCTaGGGGAGATCTGCCTGGGTG +
Preference number: 2 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSSPLSA*GRSAWV
Trigger: CACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
3UTR-3UTR CCA 90 bp TGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTCCAAGATCCCAGAGGTGGACATATaGCCGGGCCCTCGTCCCTTT +
Preference number: 2 (lower is better)
Translates to: WKQCRDTTPQPLAQMSKIPEVDI*PGPRPF
Trigger: AAAGGGACGAGGGCCCGGCCATATGTCCACCTCTGG...GATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR-3UTR TCA 90 bp GGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACACACACACACCCCTTCTaGAACCAGAGATGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GDLPGCSLHTHTHTQTHTHTHPF*NQRWGL
Trigger: CAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTG...TGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
3UTR-3UTR TCA 90 bp TCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACACACACACCCCTTCTaGAACCAGAGATGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SCPPPTMGSSLLTTSPAVHTHPF*NQRWGL
Trigger: CAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTG...TACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
3UTR-3UTR CCA 90 bp CCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTACATTTCTCCCCAGGCTaGATGGCCAACTCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: PPTMGSSLLTTSPAVPSVHFSPG*MANSPA
Trigger: TGCTGGGGAGTTGGCCATCCAGCCTGGGGAGAAATG...TACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
3UTR-3UTR CCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTTGGGGGAGATCTGCCTaGGTGCTCCCTACACACACA +
Preference number: 2 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSWGRSA*VLPTHT
Trigger: TGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCA...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
3UTR CAA 90 bp TGGCGCTGGTGGGAGTGTAGCAATGAGGACGACCAGAGGTCACTCTaGTCGCCATCTTGGTATTGGTGGGTTTTGGCCGGCTTCTTTACT +
Preference number: 2 (lower is better)
Translates to: WRWWECSNEDDQRSL*SPSWYWWVLAGFFT
Trigger: AGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATTGCTACACTCCCACCAGCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR-3UTR CCA 90 bp GGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCATTTCTCCCCAGGCTaGATGGCCAACTCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: GSNASYRSTGLFQSTFCFHFSPG*MANSPA
Trigger: TGCTGGGGAGTTGGCCATCCAGCCTGGGGAGAAATG...GAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR-3UTR CCA 90 bp TCTGGATCCCTAGGGCTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCAACACCGCAACCACTaGCCCAGATGTCCAAGATCT +
Preference number: 2 (lower is better)
Translates to: SGSLGLPQYTPPVYKPPQQHRNH*PRCPRS
Trigger: AGATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTG...CTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAGCCCTAGGGATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR CAA 90 bp TTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTaGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCC +
Preference number: 2 (lower is better)
Translates to: LQKHRTVPKHLLLPF*SSSHDGELTTYYLS
Trigger: GGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
3UTR-3UTR CCA 90 bp AAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACTCAGCATGGGGCAGCTaGAACATTCAAACATTTCTC +
Preference number: 2 (lower is better)
Translates to: KVLSQPGGDLPGCSLHTHSAWGS*NIQTFL
Trigger: GAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGA...GTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
3UTR-3UTR CCA 90 bp CATCTTGGTATTGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAAGTCCTCTCTCAGCCTaGGGGAGATCTGCCTGGGTG +
Preference number: 2 (lower is better)
Translates to: HLGIGGFWPASLLQPVLSSPLSA*GRSAWV
Trigger: CACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT...TGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR-3UTR GCA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCGGAGATCTGCCTGGGTaGTCCCTACACACACACACA +
Preference number: 2 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSGDLPG*SLHTHT
Trigger: TGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
3UTR-3UTR CCA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGCTGCTGTCAGCATaGGGCAGCTGGAACATTCAA +
Preference number: 2 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPGLLSA*GSWNIQ
Trigger: TTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
3UTR-3UTR CCA 90 bp GGCTACTCCATAGACAGGGCAGGGCTGCTGGTTGCCCATTTTTATGGTTATTTCCTCTTGTCGCCATCTTaGTATTGGTGGGTTTTGGCC +
Preference number: 2 (lower is better)
Translates to: GYSIDRAGLLVAHFYGYFLLSPS*YWWVLA
Trigger: GGCCAAAACCCACCAATACCAAGATGGCGACAAGAG...GAAATAACCATAAAAATGGGCAACCAGCAGCCCTGCCCTGTCTATGGAGTAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR CAA 90 bp GACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTGGTGGGTTTaGGCCGGCTTCTTTACTGCAACCTGTTTTATCAGCAGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: DDQRSLLSPSWYWWV*AGFFTATCFISRFF
Trigger: AAAGAACCTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR-3UTR CCA 90 bp CATCTTGGTATTGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAAGCTCCTATTCCAGGTaGAGTTGCCCAGGTTCAAAC +
Preference number: 2 (lower is better)
Translates to: HLGIGGFWPASLLQPVLSSSYSR*SCPGSN
Trigger: GTTTGAACCTGGGCAACTCCACCTGGAATAGGAGCT...TGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR-3UTR CCA 90 bp TGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAGCAGGTTCTTTTCAGCATGGGGCAGCTaGAACATTCAAACATTTCTC +
Preference number: 2 (lower is better)
Translates to: WWVLAGFFTATCFISRFFSAWGS*NIQTFL
Trigger: GAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGA...AAAGAACCTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR-3UTR CCA 90 bp TGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAGCAGGTTCTTTAATGCTTTAACCATCTaGGAATGCAGCCCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: WWVLAGFFTATCFISRFFNALTI*ECSPVG
Trigger: ACCTACTGGGCTGCATTCCCAGATGGTTAAAGCATT...AAAGAACCTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR GCA 72 bp CACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTaGCACCACTCCATAGCAGTGCCCTTGCTTCTGGTT +
Preference number: 3 (lower is better)
Translates to: HPQAPATSRWPA*HHSIAVPLLLV
Trigger: AACCAGAAGCAAGGGCACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR CCA 72 bp CCCATGGTGACCAAGGGCCTCCCAGAGGTGGACATATaGCCGGGCCCTCGTCCCTTTGCCCACGTAGAAGAT +
Preference number: 3 (lower is better)
Translates to: PMVTKGLPEVDI*PGPRPFAHVED
Trigger: ATCTTCTACGTGGGCAAAGGGACGAGGGCCCGGCCATATGTCCACCTCTGGGAGGCCCTTGGTCACCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR CCA 72 bp AACCACTGGCCCAGATGTCCAAGATCTGACGCACCTTaGGGCAGGCCTGGTGGGGCTGTTTTCTTGACCGCC +
Preference number: 3 (lower is better)
Translates to: NHWPRCPRSDAP*GRPGGAVFLTA
Trigger: GGCGGTCAAGAAAACAGCCCCACCAGGCCTGCCCCAAGGTGCGTCAGATCTTGGACATCTGGGCCAGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR TCA 72 bp ACAACACCGCAACCACTGGCCCAGATGTCCAAGATCTaGCGCACCTTGGGGCAGGCCTGGTGGGGCTGTTTT +
Preference number: 3 (lower is better)
Translates to: TTPQPLAQMSKI*RTLGQAWWGCF
Trigger: AAAACAGCCCCACCAGGCCTGCCCCAAGGTGCGTCAGATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR-3UTR CAA 90 bp ACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTGCTGGAAGCAATGTAGGGGGTGGGGCTGTTTTCTaGACCGCCCATGGTGACCAA +
Preference number: 3 (lower is better)
Translates to: TPPVYKPPQRPRAGSNVGGGAVF*TAHGDQ
Trigger: TTGGTCACCATGGGCGGTCAAGAAAACAGCCCCACC...CCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR CCA 72 bp GCTGGAAGCAATGTAGGGACACAACACCGCAACCACTaGCCCAGATGTCCAAGATCTGACGCACCTTGGGGC +
Preference number: 3 (lower is better)
Translates to: AGSNVGTQHRNH*PRCPRSDAPWG
Trigger: GCCCCAAGGTGCGTCAGATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR TCA 72 bp CCACCACTCCATAGCAGTGCCCTTGCTTCTGGTTGGTaGGCGTCTGGATCCCTAGGGCTTCCACAATACACG +
Preference number: 3 (lower is better)
Translates to: PPLHSSALASGW*ASGSLGLPQYT
Trigger: CGTGTATTGTGGAAGCCCTAGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCACTGCTATGGAGTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
3UTR GCA 72 bp AAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTaGTCCCTACACACACACACACACACACAAACACAC +
Preference number: 3 (lower is better)
Translates to: KVLSQPGGDLPG*SLHTHTHTQTH
Trigger: GTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
3UTR CCA 72 bp CTGGCCAGCCATGGCATTTGTAAACTGTCATGGCGCTaGTGGGAGTGTAGCAATGAGGACGACCAGAGGTCA +
Preference number: 3 (lower is better)
Translates to: LASHGICKLSWR*WECSNEDDQRS
Trigger: TGACCTCTGGTCGTCCTCATTGCTACACTCCCACCAGCGCCATGACAGTTTACAAATGCCATGGCTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR CCA 72 bp AATGAGGACGACCAGAGGTCACTCTTGTCGCCATCTTaGTATTGGTGGGTTTTGGCCGGCTTCTTTACTGCA +
Preference number: 3 (lower is better)
Translates to: NEDDQRSLLSPS*YWWVLAGFFTA
Trigger: TGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR CCA 72 bp GACCAGAGGTCACTCTTGTCGCCATCTTGGTATTGGTaGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTT +
Preference number: 3 (lower is better)
Translates to: DQRSLLSPSWYW*VLAGFFTATCF
Trigger: AAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATGGCGACAAGAGTGACCTCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR GCA 72 bp ATCTTGGTATTGGTGGGTTTTGGCCGGCTTCTTTACTaGAACCTGTTTTATCAGCAGGTTCTTTATGACCCG +
Preference number: 3 (lower is better)
Translates to: ILVLVGFGRLLY*NLFYQQVLYDP
Trigger: CGGGTCATAAAGAACCTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR CCA 72 bp CATAGACAGGGCAGGGCTGCTGGTTGCCCATTTTTATaGTTATTTCTTGATGATATGCTAAACAAGGGGTGG +
Preference number: 3 (lower is better)
Translates to: HRQGRAAGCPFL*LFLDDMLNKGW
Trigger: CCACCCCTTGTTTAGCATATCATCAAGAAATAACCATAAAAATGGGCAACCAGCAGCCCTGCCCTGTCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp GGTGCACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATGTCCTCAGGGGCCCTTaGCACCCGGAGGCGCTCAAG +
Preference number: 4 (lower is better)
Translates to: GAPPSAGDEQVASLPPLHVLRGP*HPEALK
Trigger: CTTGAGCGCCTCCGGGTGTCAAGGGCCCCTGAGGAC...ATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp CCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAGCAGTGCACGCGGCGGCCACATaGAGCGGCGTCAGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: PQAPATSRWPACHHSIAVHAAAT*SGVSAS
Trigger: CGAGGCACTGACGCCGCTGCATGTGGCCGCCGCGTG...CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp CCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAGCAGTGGCACGGTGCAGCAGGTaGACCCCCAAGCGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: PQAPATSRWPACHHSIAVARCSR*TPKRRR
Trigger: TCGCCGGCGCTTGGGGGTGCACCTGCTGCACCGTGC...CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp GCAGGTGCACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCTCCGGGTCCGGGTCCTaGTCCGCGTGTCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: AGAPPSAGDEQVASLPPLSGSGS*SACRDP
Trigger: AGGATCTCGACACGCGGACCAGGACCCGGACCCGGA...GAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp GCAGGTGCACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCAGGTCCAGAGAGGCCTaGGGTGCCAGGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AGAPPSAGDEQVASLPPLRSREA*GARCRL
Trigger: GAGCCTGCACCTGGCACCCCAGGCCTCTCTGGACCT...GAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR TCA 90 bp GGTGCACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATTCTGCCTCCGTGCCCTaGGACCTAGGTACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GAPPSAGDEQVASLPPLHSASVP*DLGTLW
Trigger: CCAGAGGGTACCTAGGTCTCAGGGCACGGAGGCAGA...ATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR TCA 90 bp CCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAGCAGTGCTTGACCGCCCATGGTaGCCAAGGGCCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PQAPATSRWPACHHSIAVLDRPW*PRASQR
Trigger: CCTCTGGGAGGCCCTTGGTCACCATGGGCGGTCAAG...CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp GCAGGTGCACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCGGGCCCTCGTCCCTTTaGCCACGTAGAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: AGAPPSAGDEQVASLPPLGPSSL*PRRRWH
Trigger: GTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCC...GAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp GCAGGTGCACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCCTGAGTCTCCCAAGTaGTCGGAGTCCCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: AGAPPSAGDEQVASLPPLPESPK*SESLQQ
Trigger: TTGCTGAAGGGACTCCGAGCACTTGGGAGACTCAGG...GAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp CCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAGCAGTGCCAGAGGTGGACATATaGCCGGGCCCTCGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: PQAPATSRWPACHHSIAVPEVDI*PGPRPF
Trigger: AAAGGGACGAGGGCCCGGCCATATGTCCACCTCTGG...CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR TCA 90 bp CCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAGCAGTGGACGAAAGAGGCGTCTaGGCTGTAATCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PQAPATSRWPACHHSIAVDERGV*AVIPVP
Trigger: GGGCACTGGGATTACAGCTCAGACGCCTCTTTCGTC...CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp CCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAGCAGTGACGGGCATTCAGTTCTaGCTCCGTGCCCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: PQAPATSRWPACHHSIAVTGIQF*LRALRP
Trigger: AGGTCTCAGGGCACGGAGGCAGAACTGAATGCCCGT...CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp GGTGCACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATGAGGAAGGGGAGGACTaGAAGCCAGCAGCATTTGGT +
Preference number: 4 (lower is better)
Translates to: GAPPSAGDEQVASLPPLHEEGED*KPAAFG
Trigger: ACCAAATGCTGCTGGCTTCCAGTCCTCCCCTTCCTC...ATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp ACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGGCGCATCCCGCAACCTaGGAGCCAGGCGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: TTCWKQCRDTTPQPLAQMAHPAT*EPGGPP
Trigger: CGGAGGCCCGCCTGGCTCGCAGGTTGCGGGATGCGC...CATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp CTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACGCGCATCCCGCAACCTaGGAGCCAGGCGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LGEICLGAPYTHTHTHKHAHPAT*EPGGPP
Trigger: CGGAGGCCCGCCTGGCTCGCAGGTTGCGGGATGCGC...GTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
CDS-3UTR GCA 90 bp ATATGGCCGGGCCCTCGTCCCTTTGCCCACGTAGAAGATGGCACGGATGAAAGTGCTCCGGCCGCCAAGTaGACAGCCGCTGCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: IWPGPRPFAHVEDGTDESAPAAK*TAAAPS
Trigger: GGACGGCGCAGCGGCTGTGCACTTGGCGGCCGGAGC...ACTTTCATCCGTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCCGGCCATAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp GGTGCACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATCAACACCGCAACCACTaGCCCAGATGTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: GAPPSAGDEQVASLPPLHQHRNH*PRCPRS
Trigger: AGATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTG...ATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp ACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTGCTGGAAGCAATGTAGGGCCGGCGACGAGCAGGTaGCCAGCCTGCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: TPPVYKPPQRPRAGSNVGPATSR*PACHHS
Trigger: GGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGG...CCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp AGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTGCGCATCCCGCAACCTaGGAGCCAGGCGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: STFCFPSCPPPTMGSSLLAHPAT*EPGGPP
Trigger: CGGAGGCCCGCCTGGCTCGCAGGTTGCGGGATGCGC...AAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
CDS-3UTR GCA 90 bp TTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCGCGCATCCCGCAACCTaGGAGCCAGGCGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LSSSHDGELTTYYLSSSTAHPAT*EPGGPP
Trigger: CGGAGGCCCGCCTGGCTCGCAGGTTGCGGGATGCGC...GGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
CDS-3UTR GCA 90 bp CCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGCGCATCCCGCAACCTaGGAGCCAGGCGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: PPPTMGSSLLTTSPAVPSAHPAT*EPGGPP
Trigger: CGGAGGCCCGCCTGGCTCGCAGGTTGCGGGATGCGC...AGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
CDS-3UTR GCA 90 bp TGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCGCTCCGGCCGCCAAGTaGACAGCCGCTGCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: CQHGAAGTFKHFSPGWMAAPAAK*TAAAPS
Trigger: GGACGGCGCAGCGGCTGTGCACTTGGCGGCCGGAGC...GGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp TGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCAGCTCCGGCCGCCAAGTaGACAGCCGCTGCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: CPPPTMGSSLLTTSPAVPAPAAK*TAAAPS
Trigger: GGACGGCGCAGCGGCTGTGCACTTGGCGGCCGGAGC...TGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAGCAGTGTGGCTGCTTTTGGAGTaGTATGGAGTCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: PQAPATSRWPACHHSIAVWLLLE*YGVQRL
Trigger: GAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCA...CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp CCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAGCAGTGACCCTCTGGTTGGCATaGACAACATGCAGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: PQAPATSRWPACHHSIAVTLWLA*TTCRSP
Trigger: GGGACTTCTGCATGTTGTCCATGCCAACCAGAGGGT...CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR TCA 90 bp CACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCATGCAGGCTCGGGCTCCTaGGTCTCTGCCCCGATCCGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPSETRDGGCCQHAGSGS*VSAPIR
Trigger: CCGGATCGGGGCAGAGACTCAGGAGCCCGAGCCTGC...ATGCTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp GCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCAACTCCGGGCTGGCAGGTCCTaGGTCTCCCTGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AWGSWNIQTFLPRLDGQLRAGRS*VSLGSS
Trigger: GCTGGACCCCAGGGAGACTCAGGACCTGCCAGCCCG...GAGTTGGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp TCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCCGGGCTGGCAGGTCCTaGGTCTCCCTGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSSHDGELTTYYLSSSTIRAGRS*VSLGSS
Trigger: GCTGGACCCCAGGGAGACTCAGGACCTGCCAGCCCG...GATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp CTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCGGGCTGGCAGGTCCTaGGTCTCCCTGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSAWGSWNIQTFLPRLDGRAGRS*VSLGSS
Trigger: GCTGGACCCCAGGGAGACTCAGGACCTGCCAGCCCG...GCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp ACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCGGGCTGGCAGGTCCTaGGTCTCCCAAGTGCTCGGA +
Preference number: 4 (lower is better)
Translates to: TATTCWKQCRDTTPQPLARAGRS*VSQVLG
Trigger: TCCGAGCACTTGGGAGACTCAGGACCTGCCAGCCCG...GGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp CTAGGGCTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTGGGCCTCCGAGCACATaGCCTGGCTGGGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LGLPQYTPPVYKPPQRPRGPPST*PGWVRS
Trigger: GCTTCGGACCCAGCCAGGGCATGTGCTCGGAGGCCC...ACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAGCCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp GGGCTGCTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGGGCCTCCGAGCACATaGCCTGGCTGGGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: GLLSAWGSWNIQTFLPRLGPPST*PGWVRS
Trigger: GCTTCGGACCCAGCCAGGGCATGTGCTCGGAGGCCC...CAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGGCTCCGGCCGCCAAGTaGACAGCCGCTGCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGEAPAAK*TAAAPS
Trigger: GGACGGCGCAGCGGCTGTGCACTTGGCGGCCGGAGC...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp AGGTGGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAGCTCCGGCCGCCAAGTaGACAGCCGCTGCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RWSCPGSNASYRSTGLFQAPAAK*TAAAPS
Trigger: GGACGGCGCAGCGGCTGTGCACTTGGCGGCCGGAGC...TTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTCACGCGGCGGCCACATaGAGCGGCGTCAGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTHAAAT*SGVSAS
Trigger: CGAGGCACTGACGCCGCTGCATGTGGCCGCCGCGTG...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp TTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCCACGCGGCGGCCACATaGAGCGGCGTCAGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: LSSSHDGELTTYYLSSSTHAAAT*SGVSAS
Trigger: CGAGGCACTGACGCCGCTGCATGTGGCCGCCGCGTG...GGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTGCTGGATCCAGGTGTCCCTGCTaGAGGGCCAGGTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LPQYTPPVYKPPQRPRAGSRCPC*RARSSG
Trigger: GCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGA...TCCAGCACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp TCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGGCACGGTGCAGCAGGTaGACCCCCAAGCGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: SLLVLLPRWGAHYLLPLQARCSR*TPKRRR
Trigger: TCGCCGGCGCTTGGGGGTGCACCTGCTGCACCGTGC...CTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp GCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCAACTCGCACGGTGCAGCAGGTaGACCCCCAAGCGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: AWGSWNIQTFLPRLDGQLARCSR*TPKRRR
Trigger: TCGCCGGCGCTTGGGGGTGCACCTGCTGCACCGTGC...GAGTTGGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp AGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTGCTCCTCTACTGCCCTaGGAGCCAGGCGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: STFCFPSCPPPTMGSSLLAPLLP*EPGGPP
Trigger: CGGAGGCCCGCCTGGCTCGCAGGGCAGTAGAGGAGC...AAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652132.1
CDS-3UTR CCA 90 bp ACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTGCTGGAAGCAATGTAGGGAGCACATGCCCTGGCTaGGTCCGAAGCGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: TPPVYKPPQRPRAGSNVGSTCPG*VRSAPP
Trigger: AGGCGGTGCGCTTCGGACCCAGCCAGGGCATGTGCT...CCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp AAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACTCCGGGTCCGGGTCCTaGTCCGCGTGTCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: KVLSQPGGDLPGCSLHTHSGSGS*SACRDP
Trigger: AGGATCTCGACACGCGGACCAGGACCCGGACCCGGA...GTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp ACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTGCTGGAAGCAATGTAGGGGTAATCCCAGTGCCCTaGAGGGGACGCCGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TPPVYKPPQRPRAGSNVGVIPVP*RGRRAP
Trigger: GGGAGCTCGGCGTCCCCTCCAGGGCACTGGGATTAC...CCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR TCA 90 bp CCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTCCTCAGGGGCCCTTaGCACCCGGAGGCGCTCAAG +
Preference number: 4 (lower is better)
Translates to: PPPTMGSSLLTTSPAVPSVLRGP*HPEALK
Trigger: CTTGAGCGCCTCCGGGTGTCAAGGGCCCCTGAGGAC...AGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000594072.6
CDS-3UTR TCA 90 bp GGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCAGCAGGCTCGGGCTCCTaGGTCTCTGCCCCGATCCGG +
Preference number: 4 (lower is better)
Translates to: GVAQVQTPLTEAPDCSKAAGSGS*VSAPIR
Trigger: CCGGATCGGGGCAGAGACTCAGGAGCCCGAGCCTGC...TGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR TCA 90 bp CGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGCGGGCTGGCAGGTCCTaGGTCTCCCTGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLLQKHRTVPKHLLLPFLRAGRS*VSLGSS
Trigger: GCTGGACCCCAGGGAGACTCAGGACCTGCCAGCCCG...CAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR TCA 90 bp ACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGCTCAGCTGGGGTCAGTaGGAAGGCTCGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TTCWKQCRDTTPQPLAQMLSWGQ*EGSGWQ
Trigger: CTGCCAGCCCGAGCCTTCTCACTGACCCCAGCTGAG...CATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR TCA 90 bp CTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACCTCAGCTGGGGTCAGTaGGAAGGCTCGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LGEICLGAPYTHTHTHKHLSWGQ*EGSGWQ
Trigger: CTGCCAGCCCGAGCCTTCTCACTGACCCCAGCTGAG...GTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp CCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCCTTGACCGCCCATGGTaGCCAAGGGCCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PFLSSSHDGELTTYYLSSLDRPW*PRASQR
Trigger: CCTCTGGGAGGCCCTTGGTCACCATGGGCGGTCAAG...GCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp GTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACTTGACCGCCCATGGTaGCCAAGGGCCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VTKSSLSLGEICLGAPYTLDRPW*PRASQR
Trigger: CCTCTGGGAGGCCCTTGGTCACCATGGGCGGTCAAG...TGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACGGGCCTCCGAGCACATaGCCTGGCTGGGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYGPPST*PGWVRS
Trigger: GCTTCGGACCCAGCCAGGGCATGTGCTCGGAGGCCC...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTCCACAGCAGCTCCTCTACTaGCCACGGCTCCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: RAGSNVGTQHRNHWPRCPQQLLY*PRLLLP
Trigger: CGGGAGGAGGAGCCGTGGGCAGTAGAGGAGCTGCTG...TGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp CGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGCACGCGGCGGCCACATaGAGCGGCGTCAGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: RLLQKHRTVPKHLLLPFLHAAAT*SGVSAS
Trigger: CGAGGCACTGACGCCGCTGCATGTGGCCGCCGCGTG...CAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp TGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCTCCAGGTGTCCCTGCTaGAGGGCCAGGTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: CQHGAAGTFKHFSPGWMASRCPC*RARSSG
Trigger: GCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGA...GGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp ATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTATCCAGGTGTCCCTGCTaGAGGGCCAGGTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ICNKVLSQPGGDLPGCSLSRCPC*RARSSG
Trigger: GCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGA...TAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTACAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACCGCGTGTCGAGATCCTaGAGGACTCGCGCGCACTCC +
Preference number: 4 (lower is better)
Translates to: LGEICLGAPYTHTHTHKHRVSRS*RTRAHS
Trigger: GGAGTGCGCGCGAGTCCTGCAGGATCTCGACACGCG...GTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTGGGCTCCTGAGTCTCTaGCCCGATCCGGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTPSETRDGGCCGLLSL*PDPGPG
Trigger: ACCCGGACCCGGATCGGGGCAGAGACTCAGGAGCCC...ACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp GGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCAGCACGGTGCAGCAGGTaGACCCCCAAGCGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: GVAQVQTPLTEAPDCSKAARCSR*TPKRRR
Trigger: TCGCCGGCGCTTGGGGGTGCACCTGCTGCACCGTGC...TGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGGCACGGTGCAGCAGGTaGACCCCCAAGCGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGEARCSR*TPKRRR
Trigger: TCGCCGGCGCTTGGGGGTGCACCTGCTGCACCGTGC...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCAGCTCCTCTACTaGCCTGCGAGCCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTPSETRDGGCCQQLLY*PASQAG
Trigger: GCCCGCCTGGCTCGCAGGGCAGTAGAGGAGCTGCTG...ACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652132.1
CDS-3UTR CCA 90 bp TCCACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGTCCGAGCACATGCCCTaGCTGGGTCCGAAGCGCACC +
Preference number: 4 (lower is better)
Translates to: STATTCWKQCRDTTPQPLSEHMP*LGPKRT
Trigger: GGTGCGCTTCGGACCCAGCCAGGGCATGTGCTCGGA...CAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp CCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCTCCGAGCACATGCCCTaGCTGGGTCCGAAGCGCACC +
Preference number: 4 (lower is better)
Translates to: PFLSSSHDGELTTYYLSSSEHMP*LGPKRT
Trigger: GGTGCGCTTCGGACCCAGCCAGGGCATGTGCTCGGA...GCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACTCCGAGCACATGCCCTaGCTGGGTCCGAAGCGCACC +
Preference number: 4 (lower is better)
Translates to: LGEICLGAPYTHTHTHKHSEHMP*LGPKRT
Trigger: GGTGCGCTTCGGACCCAGCCAGGGCATGTGCTCGGA...GTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp ATATGGCCGGGCCCTCGTCCCTTTGCCCACGTAGAAGATGGCACGGATGAAAGTCGACAGATCGAGCGTTaGGGTCCCCGCCTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: IWPGPRPFAHVEDGTDESRQIER*GPRLGA
Trigger: TGCGCCAAGGCGGGGACCCCAACGCTCGATCTGTCG...ACTTTCATCCGTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCCGGCCATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp GGGCTGCTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGTCCGGGTCCGGGTCCTaGTCCGCGTGTCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: GLLSAWGSWNIQTFLPRLSGSGS*SACRDP
Trigger: AGGATCTCGACACGCGGACCAGGACCCGGACCCGGA...CAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTACCGGCGACGAGCAGGTaGCCAGCCTGCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: PPTMGSSLLTTSPAVPSVPATSR*PACHHS
Trigger: GGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGG...TACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp GGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACACCGGCGACGAGCAGGTaGCCAGCCTGCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: GDLPGCSLHTHTHTQTHTPATSR*PACHHS
Trigger: GGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGG...TGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp TGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACTCAGCTGGGGTCAGTaGGAAGGCTCGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: WGRSAWVLPTHTHTHTNTLSWGQ*EGSGWQ
Trigger: CTGCCAGCCCGAGCCTTCTCACTGACCCCAGCTGAG...TGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp TGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCCTCAGCTGGGGTCAGTaGGAAGGCTCGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CQHGAAGTFKHFSPGWMALSWGQ*EGSGWQ
Trigger: CTGCCAGCCCGAGCCTTCTCACTGACCCCAGCTGAG...GGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp ACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCGCACGGATGAAAGTCTaGAGGCGCTCAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: TATTCWKQCRDTTPQPLAARMKV*RRSAGV
Trigger: GACCCCAGCTGAGCGCCTTCAGACTTTCATCCGTGC...GGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR TCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTCTTGACCGCCCATGGTaGCCAAGGGCCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTLDRPW*PRASQR
Trigger: CCTCTGGGAGGCCCTTGGTCACCATGGGCGGTCAAG...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp GCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCAACTCCAGCAGCTCCTCTACTaGCCACGGCTCCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: AWGSWNIQTFLPRLDGQLQQLLY*PRLLLP
Trigger: CGGGAGGAGGAGCCGTGGGCAGTAGAGGAGCTGCTG...GAGTTGGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
CDS-3UTR GCA 90 bp TGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACAGCAGCTCCTCTACTaGCCACGGCTCCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: WGRSAWVLPTHTHTHTNTQQLLY*PRLLLP
Trigger: CGGGAGGAGGAGCCGTGGGCAGTAGAGGAGCTGCTG...TGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
CDS-3UTR GCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACCACGCGGCGGCCACATaGAGCGGCGTCAGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNHAAAT*SGVSAS
Trigger: CGAGGCACTGACGCCGCTGCATGTGGCCGCCGCGTG...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp AGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACACACACGCGGCGGCCACATaGAGCGGCGTCAGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: RSAWVLPTHTHTHTNTHTHAAAT*SGVSAS
Trigger: CGAGGCACTGACGCCGCTGCATGTGGCCGCCGCGTG...TGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp TCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCGCGTGTCGAGATCCTaGAGGACTCGCGCGCACTCC +
Preference number: 4 (lower is better)
Translates to: SLLVLLPRWGAHYLLPLQRVSRS*RTRAHS
Trigger: GGAGTGCGCGCGAGTCCTGCAGGATCTCGACACGCG...CTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTCGCGTGTCGAGATCCTaGAGGACTCGCGCGCACTCC +
Preference number: 4 (lower is better)
Translates to: PPPTMGSSLLTTSPAVPSRVSRS*RTRAHS
Trigger: GGAGTGCGCGCGAGTCCTGCAGGATCTCGACACGCG...AGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp TGCCCTTGCTTCTGGTTGGTGAGCGTCTGGATCCCTAGGGCTTCCACAATACACCGCGTGTCGAGATCCTaGAGGACTCGCGCGCACTCC +
Preference number: 4 (lower is better)
Translates to: CPCFWLVSVWIPRASTIHRVSRS*RTRAHS
Trigger: GGAGTGCGCGCGAGTCCTGCAGGATCTCGACACGCG...GTGTATTGTGGAAGCCCTAGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp TGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTCCAAGATCGGGCTCCTGAGTCTCTaGCCCGATCCGGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: WKQCRDTTPQPLAQMSKIGLLSL*PDPGPG
Trigger: ACCCGGACCCGGATCGGGGCAGAGACTCAGGAGCCC...GATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp AAGCCTCCACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACACAAGGAGGGCACGGTaGAGCAGGTGCACCCCCAAG +
Preference number: 4 (lower is better)
Translates to: KPPQRPRAGSNVGTQHRNTRRAR*SRCTPK
Trigger: CTTGGGGGTGCACCTGCTGCACCGTGCCCTCCTTGT...GTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp TGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCCGACAGATCGAGCGTTaGGGTCCCCGCCTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: CQHGAAGTFKHFSPGWMARQIER*GPRLGA
Trigger: TGCGCCAAGGCGGGGACCCCAACGCTCGATCTGTCG...GGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACTCCGGGTCCGGGTCCTaGTCCGCGTGTCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYSGSGS*SACRDP
Trigger: AGGATCTCGACACGCGGACCAGGACCCGGACCCGGA...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCAGGTCCAGAGAGGCCTaGGGTGCCAGGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLPFLSSSHDGELTTYYLRSREA*GARCRL
Trigger: GAGCCTGCACCTGGCACCCCAGGCCTCTCTGGACCT...GAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTAAGGTCCAGAGAGGCCTaGGGTGCCAGGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ICNKVLSQPGGDLPGCSLRSREA*GARCRL
Trigger: GAGCCTGCACCTGGCACCCCAGGCCTCTCTGGACCT...TAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTACAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTGTAATCCCAGTGCCCTaGAGGGGACGCCGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTPSETRDGGCCVIPVP*RGRRAP
Trigger: GGGAGCTCGGCGTCCCCTCCAGGGCACTGGGATTAC...ACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACGTAATCCCAGTGCCCTaGAGGGGACGCCGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYVIPVP*RGRRAP
Trigger: GGGAGCTCGGCGTCCCCTCCAGGGCACTGGGATTAC...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CAAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTAGTAATCCCAGTGCCCTaGAGGGGACGCCGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QSTFCFPSCPPPTMGSSLVIPVP*RGRRAP
Trigger: GGGAGCTCGGCGTCCCCTCCAGGGCACTGGGATTAC...TAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGGTAATCCCAGTGCCCTaGAGGGGACGCCGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SLLVLLPRWGAHYLLPLQVIPVP*RGRRAP
Trigger: GGGAGCTCGGCGTCCCCTCCAGGGCACTGGGATTAC...CTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTGTAATCCCAGTGCCCTaGAGGGGACGCCGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTVIPVP*RGRRAP
Trigger: GGGAGCTCGGCGTCCCCTCCAGGGCACTGGGATTAC...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTAGGGCTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTAGATCTGACGCACCTTaGGGCAGGCCTGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGLPQYTPPVYKPPQRPRRSDAP*GRPGGA
Trigger: AGCCCCACCAGGCCTGCCCCAAGGTGCGTCAGATCT...ACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAGCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp AGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACACACCGGCGACGAGCAGGTaGCCAGCCTGCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: RSAWVLPTHTHTHTNTHTPATSR*PACHHS
Trigger: GGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGG...TGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp TCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTCTGCCTCCGTGCCCTaGGACCTAGGTACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSSHDGELTTYYLSSSTISASVP*DLGTLW
Trigger: CCAGAGGGTACCTAGGTCTCAGGGCACGGAGGCAGA...GATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTTCTGCCTCCGTGCCCTaGGACCTAGGTACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTPSETRDGGCCSASVP*DLGTLW
Trigger: CCAGAGGGTACCTAGGTCTCAGGGCACGGAGGCAGA...ACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp CCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACTCAGCTGGGGTCAGTaGGAAGGCTCGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PSASLLVLLPRWGAHYLLLSWGQ*EGSGWQ
Trigger: CTGCCAGCCCGAGCCTTCTCACTGACCCCAGCTGAG...TAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp GGGAGTGTAGCAATGAGGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTGGGCCTCCGAGCACATaGCCTGGCTGGGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: GSVAMRTTRGHSCRHLGIGPPST*PGWVRS
Trigger: GCTTCGGACCCAGCCAGGGCATGTGCTCGGAGGCCC...AATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATTGCTACACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp GGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCGGGCCTCCGAGCACATaGCCTGGCTGGGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: GSNASYRSTGLFQSTFCFGPPST*PGWVRS
Trigger: GCTTCGGACCCAGCCAGGGCATGTGCTCGGAGGCCC...GAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp GGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACAGCAGCTCCTCTACTaGCCACGGCTCCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: GVAQVQTPLTEAPDCSKAQQLLY*PRLLLP
Trigger: CGGGAGGAGGAGCCGTGGGCAGTAGAGGAGCTGCTG...TGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp AGGTGGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAACAGCAGCTCCTCTACTaGCCACGGCTCCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: RWSCPGSNASYRSTGLFQQQLLY*PRLLLP
Trigger: CGGGAGGAGGAGCCGTGGGCAGTAGAGGAGCTGCTG...TTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp ACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTTCCAGGTGTCCCTGCTaGAGGGCCAGGTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: TPLTEAPDCSKAPSASLLSRCPC*RARSSG
Trigger: GCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGA...AAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp CTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGTCCAGGTGTCCCTGCTaGAGGGCCAGGTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LTTSPAVPSVTKSSLSLGSRCPC*RARSSG
Trigger: GCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGA...CCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACGCGTGTCGAGATCCTaGAGGACTCGCGCGCACTCC +
Preference number: 4 (lower is better)
Translates to: PSASLLVLLPRWGAHYLLRVSRS*RTRAHS
Trigger: GGAGTGCGCGCGAGTCCTGCAGGATCTCGACACGCG...TAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp TCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACGCGTGTCGAGATCCTaGAGGACTCGCGCGCACTCC +
Preference number: 4 (lower is better)
Translates to: SCPPPTMGSSLLTTSPAVRVSRS*RTRAHS
Trigger: GGAGTGCGCGCGAGTCCTGCAGGATCTCGACACGCG...TACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp AGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACACAGGGCTCCTGAGTCTCTaGCCCGATCCGGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: RSAWVLPTHTHTHTNTHTGLLSL*PDPGPG
Trigger: ACCCGGACCCGGATCGGGGCAGAGACTCAGGAGCCC...TGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGTCCGGGCTCCTGAGTCTCTaGCCCGATCCGGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: LLQKHRTVPKHLLLPFLSGLLSL*PDPGPG
Trigger: ACCCGGACCCGGATCGGGGCAGAGACTCAGGAGCCC...GGACAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp AGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACGTCAGAGTCAGGGCCTaGAGACGGGCATTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SPLSAWGRSAWVLPTHTHVRVRA*RRAFSS
Trigger: AGAACTGAATGCCCGTCTGCAGGCCCTGACTCTGAC...GTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGCAGGTGGCCAGCCTaGCACCACTCCATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PFLSSSHDGELTTYYLSSSRWPA*HHSIAV
Trigger: CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCT...GCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGCACGGTGCAGCAGGTaGACCCCCAAGCGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGARCSR*TPKRRR
Trigger: TCGCCGGCGCTTGGGGGTGCACCTGCTGCACCGTGC...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTACAAGGAGGGCACGGTaGAGCAGGTGCACCCCCAAG +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTTRRAR*SRCTPK
Trigger: CTTGGGGGTGCACCTGCTGCACCGTGCCCTCCTTGT...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp AAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACACAAGGAGGGCACGGTaGAGCAGGTGCACCCCCAAG +
Preference number: 4 (lower is better)
Translates to: KAPSASLLVLLPRWGAHYTRRAR*SRCTPK
Trigger: CTTGGGGGTGCACCTGCTGCACCGTGCCCTCCTTGT...GTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTCGACAGATCGAGCGTTaGGGTCCCCGCCTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSRQIER*GPRLGA
Trigger: TGCGCCAAGGCGGGGACCCCAACGCTCGATCTGTCG...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCATCCGGGTCCGGGTCCTaGTCCGCGTGTCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPSGSGS*SACRDP
Trigger: AGGATCTCGACACGCGGACCAGGACCCGGACCCGGA...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCAGGGAGTGTCCGAGGCTaGGTCCTCAGCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: CPPPTMGSSLLTTSPAVPGSVRG*VLSSRD
Trigger: GTCTCTGGAGCTGAGGACCCAGCCTCGGACACTCCC...TGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCGGGAGTGTCCGAGGCTaGGTCCTCAGCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LLPFLSSSHDGELTTYYLGSVRG*VLSSRD
Trigger: GTCTCTGGAGCTGAGGACCCAGCCTCGGACACTCCC...GAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AAGCCTCCACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCCAAGTCAGACACAGTaGAGACTGGCAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KPPQRPRAGSNVGTQHRNPSQTQ*RLAGAG
Trigger: GCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGG...GTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp AGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACATCTGCCTGGACATCTaGAATACAGCCCGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: SPLSAWGRSAWVLPTHTHICLDI*NTARPQ
Trigger: CTGCGGACGGGCTGTATTCCAGATGTCCAGGCAGAT...GTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp AAGCCTCCACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACTTGGGGCAGGCCTGGTaGGGCTGTTTTCTTGACCGC +
Preference number: 4 (lower is better)
Translates to: KPPQRPRAGSNVGTQHRNLGQAW*GCFLDR
Trigger: GCGGTCAAGAAAACAGCCCCACCAGGCCTGCCCCAA...GTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp TCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGAGATCTGACGCACCTTaGGGCAGGCCTGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SLLVLLPRWGAHYLLPLQRSDAP*GRPGGA
Trigger: AGCCCCACCAGGCCTGCCCCAAGGTGCGTCAGATCT...CTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCTCTCCCCAGGCTGGATaGCCAACTCCCCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: PFLSSSHDGELTTYYLSSSPQAG*PTPQHS
Trigger: TGAGTGCTGGGGAGTTGGCCATCCAGCCTGGGGAGA...GCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAAGTGAGCCACCGCGCCTaGCCAGCCATGGCATTTGTA +
Preference number: 4 (lower is better)
Translates to: SLGEICLGAPYTHTHTHKVSHRA*PAMAFV
Trigger: TACAAATGCCATGGCTGGCCAGGCGCGGTGGCTCAC...TTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp CGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTCCAAGACCTCAACCGCTGTaGCGAAAGAGGCGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RAGSNVGTQHRNHWPRCPRPQPL*RKRRLS
Trigger: GCTCAGACGCCTCTTTCGTCACAGCGGTTGAGGTCT...TGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR TCA 90 bp TGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCGCACGGATGAAAGTCTaGAGGCGCTCAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: CQHGAAGTFKHFSPGWMAARMKV*RRSAGV
Trigger: GACCCCAGCTGAGCGCCTTCAGACTTTCATCCGTGC...GGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp AAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACGCACGGATGAAAGTCTaGAGGCGCTCAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KAPSASLLVLLPRWGAHYARMKV*RRSAGV
Trigger: GACCCCAGCTGAGCGCCTTCAGACTTTCATCCGTGC...GTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp ACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTCTTGACCGCCCATGGTaGCCAAGGGCCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TPLTEAPDCSKAPSASLLLDRPW*PRASQR
Trigger: CCTCTGGGAGGCCCTTGGTCACCATGGGCGGTCAAG...AAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR TCA 90 bp TCCACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGTGGGGCTGTTTTCTTaGCCGCCCATGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: STATTCWKQCRDTTPQPLVGLFS*PPMVTK
Trigger: CTTGGTCACCATGGGCGGTCAAGAAAACAGCCCCAC...CAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR TCA 90 bp AAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACCAGATGTCCAAGATCTaGCGCACCTTGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: KAPSASLLVLLPRWGAHYQMSKI*RTLGQA
Trigger: GGCCTGCCCCAAGGTGCGTCAGATCTTGGACATCTG...GTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGATGTCCAAGATCTaGCGCACCTTGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTPSETRDGGCCQMSKI*RTLGQA
Trigger: GGCCTGCCCCAAGGTGCGTCAGATCTTGGACATCTG...ACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp CTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACCTTGCTTCTGGTTGGTaGGCGTCTGGATCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: LGEICLGAPYTHTHTHKHLASGW*ASGSLG
Trigger: CCCTAGGGATCCAGACGCTCACCAACCAGAAGCAAG...GTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp GTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACAACTCCTGACCTTAGGTaGTCTGCCCTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VTKSSLSLGEICLGAPYTTPDLR*SALLGL
Trigger: GAGGCCAAGGAGGGCAGATCACCTAAGGTCAGGAGT...TGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp CTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGGCTCCGGCCGCCAAGTaGACAGCCGCTGCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LTTYYLSSSTICNKVLSQAPAAK*TAAAPS
Trigger: GGACGGCGCAGCGGCTGTGCACTTGGCGGCCGGAGC...CTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGGCTCCTGAGTCTCTaGCCCGATCCGGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGGLLSL*PDPGPG
Trigger: ACCCGGACCCGGATCGGGGCAGAGACTCAGGAGCCC...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp AGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTCTGGCAGGATCTGGCTaGTCAAACTGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: STFCFPSCPPPTMGSSLLLAGSG*SNCWAS
Trigger: GCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAG...AAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp GCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCAACTCCTGGCAGGATCTGGCTaGTCAAACTGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AWGSWNIQTFLPRLDGQLLAGSG*SNCWAS
Trigger: GCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAG...GAGTTGGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCGGGCCCTCGTCCCTTTaGCCACGTAGAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: LLPFLSSSHDGELTTYYLGPSSL*PRRRWH
Trigger: GTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCC...GAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp ATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTAAGCAGGTGGCCAGCCTaGCACCACTCCATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ICNKVLSQPGGDLPGCSLSRWPA*HHSIAV
Trigger: CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCT...TAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp TCTGGATCCCTAGGGCTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGAGCAGGTGGCCAGCCTaGCACCACTCCATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGSLGLPQYTPPVYKPPQSRWPA*HHSIAV
Trigger: CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCT...CTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAGCCCTAGGGATCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp CACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCATAGCAGGTGGCCAGCCTaGCACCACTCCATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPSETRDGGCCQHSRWPA*HHSIAV
Trigger: CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCT...ATGCTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGACAAGGAGGGCACGGTaGAGCAGGTGCACCCCCAAG +
Preference number: 4 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGETRRAR*SRCTPK
Trigger: CTTGGGGGTGCACCTGCTGCACCGTGCCCTCCTTGT...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGCCGAAGCGCACCGCCTaGTCGGTCGATTTCCTACTT +
Preference number: 4 (lower is better)
Translates to: TTCWKQCRDTTPQPLAQMPKRTA*SVDFLL
Trigger: AAGTAGGAAATCGACCGACCAGGCGGTGCGCTTCGG...CATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp AAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCAGCACATGCCCTGGCTaGGTCCGAAGCGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: KRLLQKHRTVPKHLLLPFSTCPG*VRSAPP
Trigger: AGGCGGTGCGCTTCGGACCCAGCCAGGGCATGTGCT...GAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394458.7
CDS-3UTR CCA 90 bp CTTGTCGCCATCTTGGTATTGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGCGACAGATCGAGCGTTaGGGTCCCCGCCTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: LVAILVLVGFGRLLYCNLRQIER*GPRLGA
Trigger: TGCGCCAAGGCGGGGACCCCAACGCTCGATCTGTCG...CAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATGGCGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACCGACAGATCGAGCGTTaGGGTCCCCGCCTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNRQIER*GPRLGA
Trigger: TGCGCCAAGGCGGGGACCCCAACGCTCGATCTGTCG...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCCGGGTCCGGGTCCTaGTCCGCGTGTCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: SNASYRSTGLFQSTFCFPSGSGS*SACRDP
Trigger: AGGATCTCGACACGCGGACCAGGACCCGGACCCGGA...AGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCGGGAGTGTCCGAGGCTaGGTCCTCAGCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: CPGSNASYRSTGLFQSTFGSVRG*VLSSRD
Trigger: GTCTCTGGAGCTGAGGACCCAGCCTCGGACACTCCC...GAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTCCAAGATCGGGAGTGTCCGAGGCTaGGTCCTCAGCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: WKQCRDTTPQPLAQMSKIGSVRG*VLSSRD
Trigger: GTCTCTGGAGCTGAGGACCCAGCCTCGGACACTCCC...GATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp CCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTAGGGAGTGTCCGAGGCTaGGTCCTCAGCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PSASLLVLLPRWGAHYLLGSVRG*VLSSRD
Trigger: GTCTCTGGAGCTGAGGACCCAGCCTCGGACACTCCC...TAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ATATGGCCGGGCCCTCGTCCCTTTGCCCACGTAGAAGATGGCACGGATGAAAGTGAAGCCAGCAGCATTTaGTGGGGTCAGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: IWPGPRPFAHVEDGTDESEASSI*WGQSQG
Trigger: GCCCTGACTCTGACCCCACCAAATGCTGCTGGCTTC...ACTTTCATCCGTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCCGGCCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp CTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCAGGGGTTGGTGTCCGTaGGGGGCTATGAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LLPFLSSSHDGELTTYYLRGWCP*GAMSWT
Trigger: AGTCCAGCTCATAGCCCCCCACGGACACCAACCCCT...GAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGAGGGGTTGGTGTCCGTaGGGGGCTATGAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SLLVLLPRWGAHYLLPLQRGWCP*GAMSWT
Trigger: AGTCCAGCTCATAGCCCCCCACGGACACCAACCCCT...CTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAAGACACAGTGGAGACTaGCAGGTGCCGGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPRHSGD*QVPARA
Trigger: GGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCT...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AGGTGGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGACACAGTGGAGACTaGCAGGTGCCGGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: RWSCPGSNASYRSTGLFQRHSGD*QVPARA
Trigger: GGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCT...TTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTCCAAGATCAGACACAGTGGAGACTaGCAGGTGCCGGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: WKQCRDTTPQPLAQMSKIRHSGD*QVPARA
Trigger: GGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCT...GATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGAGACACAGTGGAGACTaGCAGGTGCCGGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGERHSGD*QVPARA
Trigger: GGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCT...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCATCCAAGTCAGACACAGTaGAGACTGGCAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTPSETRDGGCCQHPSQTQ*RLAGAG
Trigger: GCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGG...ATGCTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTCCAAGTCAGACACAGTaGAGACTGGCAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: PPPTMGSSLLTTSPAVPSPSQTQ*RLAGAG
Trigger: GCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGG...AGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACTCTTCCAGCTGCTGGTaGTACAACTGCCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SPLSAWGRSAWVLPTHTHSSSCW*YNCLVK
Trigger: CTTCACCAGGCAGTTGTACCACCAGCAGCTGGAAGA...GTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp GGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTGGTGGGTTTTGGCCGGGGCTGCTCAAACTGCTaGGCCAGCGCGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: GRPEVTLVAILVLVGFGRGCSNC*ASASSS
Trigger: AGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCC...CCGGCCAAAACCCACCAATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp AAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACCCTCCTGGCAGGATCTaGCTGCTCAAACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KAPSASLLVLLPRWGAHYPPGRI*LLKLLG
Trigger: GCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGG...GTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTCCAGAGGTGGACATATaGCCGGGCCCTCGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTPEVDI*PGPRPF
Trigger: AAAGGGACGAGGGCCCGGCCATATGTCCACCTCTGG...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTTTGGGGCAGGCCTGGTaGGGCTGTTTTCTTGACCGC +
Preference number: 4 (lower is better)
Translates to: PPPTMGSSLLTTSPAVPSLGQAW*GCFLDR
Trigger: GCGGTCAAGAAAACAGCCCCACCAGGCCTGCCCCAA...AGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTTTGGGGCAGGCCTGGTaGGGCTGTTTTCTTGACCGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTPSETRDGGCCLGQAW*GCFLDR
Trigger: GCGGTCAAGAAAACAGCCCCACCAGGCCTGCCCCAA...ACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACTTGGGGCAGGCCTGGTaGGGCTGTTTTCTTGACCGC +
Preference number: 4 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYLGQAW*GCFLDR
Trigger: GCGGTCAAGAAAACAGCCCCACCAGGCCTGCCCCAA...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp AGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACCAACACCGCAACCACTaGCCCAGATGTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: SPLSAWGRSAWVLPTHTHQHRNH*PRCPRS
Trigger: AGATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTG...GTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp AGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACAGCGACCACGTGCTaGAAGCAATGTAGGGACACA +
Preference number: 4 (lower is better)
Translates to: SPLSAWGRSAWVLPTHTHTATTC*KQCRDT
Trigger: TGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGT...GTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp AAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACCAGTGCCCTTGCTTCTaGTTGGTGAGCGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: KVLSQPGGDLPGCSLHTHQCPCF*LVSVWI
Trigger: GATCCAGACGCTCACCAACCAGAAGCAAGGGCACTG...GTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAACCGGCGACGAGCAGGTaGCCAGCCTGCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: HDGELTTYYLSSSTICNKPATSR*PACHHS
Trigger: GGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGG...TTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGTCTCCCCAGGCTGGATaGCCAACTCCCCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTPSETRDGGCCQSPQAG*PTPQHS
Trigger: TGAGTGCTGGGGAGTTGGCCATCCAGCCTGGGGAGA...CTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACCATTTCTCCCCAGGCTaGATGGCCAACTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGEICLGAPYTHTHTHKHHFSPG*MANSPA
Trigger: TGCTGGGGAGTTGGCCATCCAGCCTGGGGAGAAATG...GTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp ATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTAAGTCCTCTCTCAGCCTaGGGGAGATCTGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ICNKVLSQPGGDLPGCSLSPLSA*GRSAWV
Trigger: CACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT...TAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp ACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGGTCCTCAGGGGCCCTTaGCACCCGGAGGCGCTCAAG +
Preference number: 4 (lower is better)
Translates to: TMGSSLLTTSPAVPSVTKVLRGP*HPEALK
Trigger: CTTGAGCGCCTCCGGGTGTCAAGGGCCCCTGAGGAC...CTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000594072.6
CDS-3UTR TCA 90 bp ATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTAGACGAAAGAGGCGTCTaGGCTGTAATCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: ICNKVLSQPGGDLPGCSLDERGV*AVIPVP
Trigger: GGGCACTGGGATTACAGCTCAGACGCCTCTTTCGTC...TAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp CACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCATAGACCTCAACCGCTGTaGCGAAAGAGGCGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTPSETRDGGCCQHRPQPL*RKRRLS
Trigger: GCTCAGACGCCTCTTTCGTCACAGCGGTTGAGGTCT...ATGCTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp GGGAGTGTAGCAATGAGGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTTCTGCCTCCGTGCCCTaGGACCTAGGTACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSVAMRTTRGHSCRHLGISASVP*DLGTLW
Trigger: CCAGAGGGTACCTAGGTCTCAGGGCACGGAGGCAGA...AATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATTGCTACACTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTCGGGCTGGCAGGTCCTaGGTCTCCCTGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPRAGRS*VSLGSS
Trigger: GCTGGACCCCAGGGAGACTCAGGACCTGCCAGCCCG...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTGTGGGGCTGTTTTCTTaGCCGCCCATGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTVGLFS*PPMVTK
Trigger: CTTGGTCACCATGGGCGGTCAAGAAAACAGCCCCAC...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp CTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCGTGGGGCTGTTTTCTTaGCCGCCCATGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: LSAWGSWNIQTFLPRLDGVGLFS*PPMVTK
Trigger: CTTGGTCACCATGGGCGGTCAAGAAAACAGCCCCAC...GCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTCAGATGTCCAAGATCTaGCGCACCTTGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSQMSKI*RTLGQA
Trigger: GGCCTGCCCCAAGGTGCGTCAGATCTTGGACATCTG...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp TTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCCTTGCTTCTGGTTGGTaGGCGTCTGGATCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: LSSSHDGELTTYYLSSSTLASGW*ASGSLG
Trigger: CCCTAGGGATCCAGACGCTCACCAACCAGAAGCAAG...GGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp TCTGGATCCCTAGGGCTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCTTGCTTCTGGTTGGTaGGCGTCTGGATCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: SGSLGLPQYTPPVYKPPQLASGW*ASGSLG
Trigger: CCCTAGGGATCCAGACGCTCACCAACCAGAAGCAAG...CTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAGCCCTAGGGATCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR TCA 90 bp CAAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTATGGATGTCCTGGGGATaGAGCTGTCGCTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: QSTFCFPSCPPPTMGSSLWMSWG*SCRSPS
Trigger: TGAAGGCGAGCGACAGCTTCATCCCCAGGACATCCA...TAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp AGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTCACACACACCCCTTCTaGAACCAGAGATGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: STFCFPSCPPPTMGSSLLHTHPF*NQRWGL
Trigger: CAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTG...AAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp ACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCACACACACCCCTTCTaGAACCAGAGATGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTPSETRDGGCCQHTHPF*NQRWGL
Trigger: CAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTG...CTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp ATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACCCCTTCTaGAACCAGAGATGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ICNKVLSQPGGDLPGCSLHTHPF*NQRWGL
Trigger: CAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTG...TAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp CAAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACACACACACCCCTTCTaGAACCAGAGATGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QSTFCFPSCPPPTMGSSLHTHPF*NQRWGL
Trigger: CAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTG...TAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp TCCACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGACATGCAGAAGTCCCTaGCTGGTCGGTGGCAATGAC +
Preference number: 4 (lower is better)
Translates to: STATTCWKQCRDTTPQPLTCRSP*LVGGND
Trigger: GTCATTGCCACCGACCAGGCAGGGACTTCTGCATGT...CAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp AAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACTTGGCATGGACAACATaGAGAAGTCCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KVLSQPGGDLPGCSLHTHLAWTT*RSPCLV
Trigger: GACCAGGCAGGGACTTCTGCATGTTGTCCATGCCAA...GTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCATACGGGCATTCAGTTCTaGCTCCGTGCCCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTPSETRDGGCCQHTGIQF*LRALRP
Trigger: AGGTCTCAGGGCACGGAGGCAGAACTGAATGCCCGT...ATGCTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp GTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATACGGGCATTCAGTTCTaGCTCCGTGCCCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: VLLPRWGAHYLLPLQQYHTGIQF*LRALRP
Trigger: AGGTCTCAGGGCACGGAGGCAGAACTGAATGCCCGT...ATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp ACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGGTCAGAGTCAGGGCCTaGAGACGGGCATTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TTCWKQCRDTTPQPLAQMVRVRA*RRAFSS
Trigger: AGAACTGAATGCCCGTCTGCAGGCCCTGACTCTGAC...CATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp CTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACTCAATGGATGTCTGGTaGTCCCACAGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LGEICLGAPYTHTHTHKHSMDVW*SHRQWQ
Trigger: CTGCCACTGCCTGTGGGAGCACCAGACATCCATTGA...GTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CTAGGGCTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTGCCACCTGTAGAGCTTaGCTCATCCTCTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LGLPQYTPPVYKPPQRPRATCRA*LILCQP
Trigger: TGGCTGACAGAGGATGAGGCAAGCTCTACAGGTGGC...ACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAGCCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp AGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTTCTGGCTGCTCAAACTaGTGGGCCAGCGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: STFCFPSCPPPTMGSSLLSGCSN*WASASS
Trigger: TGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGA...AAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCCTGGCAGGATCTGGCTaGTCAAACTGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGSNASYRSTGLFQSTFCLAGSG*SNCWAS
Trigger: GCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAG...GCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp TGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCGGGCCCTCGTCCCTTTaGCCACGTAGAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: CPGSNASYRSTGLFQSTFGPSSL*PRRRWH
Trigger: GTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCC...GAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp CGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTCCATCCACAGCGACCACGTaGTGGAAGCAATGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: RAGSNVGTQHRNHWPRCPSTATT*WKQCRD
Trigger: GTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGA...TGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp GGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACAAGCAGGTGGCCAGCCTaGCACCACTCCATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GDLPGCSLHTHTHTQTHTSRWPA*HHSIAV
Trigger: CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCT...TGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp AAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCACAAGGAGGGCACGGTaGAGCAGGTGCACCCCCAAG +
Preference number: 4 (lower is better)
Translates to: KRLLQKHRTVPKHLLLPFTRRAR*SRCTPK
Trigger: CTTGGGGGTGCACCTGCTGCACCGTGCCCTCCTTGT...GAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp TCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTACAAGGAGGGCACGGTaGAGCAGGTGCACCCCCAAG +
Preference number: 4 (lower is better)
Translates to: SNASYRSTGLFQSTFCFPTRRAR*SRCTPK
Trigger: CTTGGGGGTGCACCTGCTGCACCGTGCCCTCCTTGT...AGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp GTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACAGGAGATCTGCCTGGGTaGTCCCTACACACACACACA +
Preference number: 4 (lower is better)
Translates to: VTKSSLSLGEICLGAPYTGDLPG*SLHTHT
Trigger: TGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC...TGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp AGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACTATTCCAGGTGGAGTTaGCCAGGTTCAAACGCCTCT +
Preference number: 4 (lower is better)
Translates to: SPLSAWGRSAWVLPTHTHYSRWS*PGSNAS
Trigger: AGAGGCGTTTGAACCTGGGCAACTCCACCTGGAATA...GTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGAGGTCCAGAGAGGCCTaGGGTGCCAGGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGRSREA*GARCRL
Trigger: GAGCCTGCACCTGGCACCCCAGGCCTCTCTGGACCT...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTAGAAGCCAGCAGCATTTaGTGGGGTCAGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ICNKVLSQPGGDLPGCSLEASSI*WGQSQG
Trigger: GCCCTGACTCTGACCCCACCAAATGCTGCTGGCTTC...TAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp TCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCGAAGCCAGCAGCATTTaGTGGGGTCAGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSSHDGELTTYYLSSSTIEASSI*WGQSQG
Trigger: GCCCTGACTCTGACCCCACCAAATGCTGCTGGCTTC...GATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp GTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACAGAGGAAGGGGAGGACTaGAAGCCAGCAGCATTTGGT +
Preference number: 4 (lower is better)
Translates to: VTKSSLSLGEICLGAPYTEEGED*KPAAFG
Trigger: ACCAAATGCTGCTGGCTTCCAGTCCTCCCCTTCCTC...TGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp TGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTCCAAGATCAGGGGTTGGTGTCCGTaGGGGGCTATGAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: WKQCRDTTPQPLAQMSKIRGWCP*GAMSWT
Trigger: AGTCCAGCTCATAGCCCCCCACGGACACCAACCCCT...GATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGAGGGGTTGGTGTCCGTaGGGGGCTATGAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGERGWCP*GAMSWT
Trigger: AGTCCAGCTCATAGCCCCCCACGGACACCAACCCCT...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGTCCAGACACAGTGGAGACTaGCAGGTGCCGGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLQKHRTVPKHLLLPFLSRHSGD*QVPARA
Trigger: GGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCT...GGACAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp GGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACACCAAGTCAGACACAGTaGAGACTGGCAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GDLPGCSLHTHTHTQTHTPSQTQ*RLAGAG
Trigger: GCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGG...TGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp AAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACGGCTGCTCAAACTGCTaGGCCAGCGCGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: KAPSASLLVLLPRWGAHYGCSNC*ASASSS
Trigger: AGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCC...GTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCGGCTGCTCAAACTGCTaGGCCAGCGCGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SSSHDGELTTYYLSSSTIGCSNC*ASASSS
Trigger: AGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCC...GATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGCCTCCTGGCAGGATCTaGCTGCTCAAACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RLLQKHRTVPKHLLLPFLPPGRI*LLKLLG
Trigger: GCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGG...CAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCTCCTGGCAGGATCTaGCTGCTCAAACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SCPPPTMGSSLLTTSPAVPPGRI*LLKLLG
Trigger: GCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGG...TACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCACCTCCTGGCAGGATCTaGCTGCTCAAACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPPPGRI*LLKLLG
Trigger: GCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGG...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGCCAGAGGTGGACATATaGCCGGGCCCTCGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGEPEVDI*PGPRPF
Trigger: AAAGGGACGAGGGCCCGGCCATATGTCCACCTCTGG...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTACCAGAGGTGGACATATaGCCGGGCCCTCGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: PPTMGSSLLTTSPAVPSVPEVDI*PGPRPF
Trigger: AAAGGGACGAGGGCCCGGCCATATGTCCACCTCTGG...TACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTGGGGCAGGCCTGGTaGGGCTGTTTTCTTGACCGC +
Preference number: 4 (lower is better)
Translates to: PGSNASYRSTGLFQSTFCLGQAW*GCFLDR
Trigger: GCGGTCAAGAAAACAGCCCCACCAGGCCTGCCCCAA...GCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp AGCCCAGTAGGTTTCAGCCTCATTTTACCCAGCTCCTATTCCAGGTGGAGTTGCAGATCTGACGCACCTTaGGGCAGGCCTGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPVGFSLILPSSYSRWSCRSDAP*GRPGGA
Trigger: AGCCCCACCAGGCCTGCCCCAAGGTGCGTCAGATCT...GCAACTCCACCTGGAATAGGAGCTGGGTAAAATGAGGCTGAAACCTACTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp CTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACCAGTGCCCTTGCTTCTaGTTGGTGAGCGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: LGEICLGAPYTHTHTHKHQCPCF*LVSVWI
Trigger: GATCCAGACGCTCACCAACCAGAAGCAAGGGCACTG...GTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp TGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAGCAGGTTCTTTCCGGCGACGAGCAGGTaGCCAGCCTGCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: WWVLAGFFTATCFISRFFPATSR*PACHHS
Trigger: GGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGG...AAAGAACCTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATTTCTCCCCAGGCTaGATGGCCAACTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYHFSPG*MANSPA
Trigger: TGCTGGGGAGTTGGCCATCCAGCCTGGGGAGAAATG...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCATTTCTCCCCAGGCTaGATGGCCAACTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSAWGSWNIQTFLPRLDGHFSPG*MANSPA
Trigger: TGCTGGGGAGTTGGCCATCCAGCCTGGGGAGAAATG...GCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACTGGGGGAGATCTGCCTaGGTGCTCCCTACACACACA +
Preference number: 4 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYWGRSA*VLPTHT
Trigger: TGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCA...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp GGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACAGTGAGCCACCGCGCCTaGCCAGCCATGGCATTTGTA +
Preference number: 4 (lower is better)
Translates to: GDLPGCSLHTHTHTQTHTVSHRA*PAMAFV
Trigger: TACAAATGCCATGGCTGGCCAGGCGCGGTGGCTCAC...TGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTGACGAAAGAGGCGTCTaGGCTGTAATCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSDERGV*AVIPVP
Trigger: GGGCACTGGGATTACAGCTCAGACGCCTCTTTCGTC...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp GGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACAAGACCTCAACCGCTGTaGCGAAAGAGGCGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GDLPGCSLHTHTHTQTHTRPQPL*RKRRLS
Trigger: GCTCAGACGCCTCTTTCGTCACAGCGGTTGAGGTCT...TGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp TGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCAGACCTCAACCGCTGTaGCGAAAGAGGCGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: CPGSNASYRSTGLFQSTFRPQPL*RKRRLS
Trigger: GCTCAGACGCCTCTTTCGTCACAGCGGTTGAGGTCT...GAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR TCA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGTCTGCCTCCGTGCCCTaGGACCTAGGTACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGSASVP*DLGTLW
Trigger: CCAGAGGGTACCTAGGTCTCAGGGCACGGAGGCAGA...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp CCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACTTGCTTCTGGTTGGTaGGCGTCTGGATCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: PSASLLVLLPRWGAHYLLLASGW*ASGSLG
Trigger: CCCTAGGGATCCAGACGCTCACCAACCAGAAGCAAG...TAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGTGGATGTCCTGGGGATaGAGCTGTCGCTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGEWMSWG*SCRSPS
Trigger: TGAAGGCGAGCGACAGCTTCATCCCCAGGACATCCA...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCATGGATGTCCTGGGGATaGAGCTGTCGCTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPWMSWG*SCRSPS
Trigger: TGAAGGCGAGCGACAGCTTCATCCCCAGGACATCCA...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp TCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTATGGATGTCCTGGGGATaGAGCTGTCGCTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SCPPPTMGSSLLTTSPAVWMSWG*SCRSPS
Trigger: TGAAGGCGAGCGACAGCTTCATCCCCAGGACATCCA...TACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp TGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCACTCCTGACCTTAGGTaGTCTGCCCTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CPGSNASYRSTGLFQSTFTPDLR*SALLGL
Trigger: GAGGCCAAGGAGGGCAGATCACCTAAGGTCAGGAGT...GAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp GGGCTGCTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGTGGCTGCTTTTGGAGTaGTATGGAGTCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GLLSAWGSWNIQTFLPRLWLLLE*YGVQRL
Trigger: GAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCA...CAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp AGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAATGGCTGCTTTTGGAGTaGTATGGAGTCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: SLGEICLGAPYTHTHTHKWLLLE*YGVQRL
Trigger: GAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCA...TTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp ACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGACATGCAGAAGTCCCTaGCTGGTCGGTGGCAATGAC +
Preference number: 4 (lower is better)
Translates to: THTHTHTPSETRDGGCCQTCRSP*LVGGND
Trigger: GTCATTGCCACCGACCAGGCAGGGACTTCTGCATGT...CTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp AAGCCTCCACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACTTGGCATGGACAACATaGAGAAGTCCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KPPQRPRAGSNVGTQHRNLAWTT*RSPCLV
Trigger: GACCAGGCAGGGACTTCTGCATGTTGTCCATGCCAA...GTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp CTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCGTCAGAGTCAGGGCCTaGAGACGGGCATTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LSAWGSWNIQTFLPRLDGVRVRA*RRAFSS
Trigger: AGAACTGAATGCCCGTCTGCAGGCCCTGACTCTGAC...GCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp GCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCAACTCTCAATGGATGTCTGGTaGTCCCACAGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AWGSWNIQTFLPRLDGQLSMDVW*SHRQWQ
Trigger: CTGCCACTGCCTGTGGGAGCACCAGACATCCATTGA...GAGTTGGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp ACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGGCCACCTGTAGAGCTTaGCTCATCCTCTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTPSETRDGGCCQATCRA*LILCQP
Trigger: TGGCTGACAGAGGATGAGGCAAGCTCTACAGGTGGC...CTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACGCCACCTGTAGAGCTTaGCTCATCCTCTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYATCRA*LILCQP
Trigger: TGGCTGACAGAGGATGAGGCAAGCTCTACAGGTGGC...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTGGGCTTCTTCCAGCTaGTGGTGGTACAACTGCCTG +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTWASSS*WWYNCL
Trigger: CAGGCAGTTGTACCACCAGCAGCTGGAAGAAGCCCA...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp TCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTATCTGGCTGCTCAAACTaGTGGGCCAGCGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SCPPPTMGSSLLTTSPAVSGCSN*WASASS
Trigger: TGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGA...TACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTTCTGGCTGCTCAAACTaGTGGGCCAGCGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSSGCSN*WASASS
Trigger: TGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGA...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGCTGGCAGGATCTGGCTaGTCAAACTGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LTTSPAVPSVTKSSLSLGLAGSG*SNCWAS
Trigger: GCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAG...CCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACGGGCCCTCGTCCCTTTaGCCACGTAGAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNGPSSL*PRRRWH
Trigger: GTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCC...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCATGGAGATCTGCCTGGGTaGTCCCTACACACACACACA +
Preference number: 4 (lower is better)
Translates to: HTHTHTPSETRDGGCCQHGDLPG*SLHTHT
Trigger: TGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC...ATGCTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp ACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCGAGCACATGCCCTaGCTGGGTCCGAAGCGCACC +
Preference number: 4 (lower is better)
Translates to: TMGSSLLTTSPAVPSVTKSEHMP*LGPKRT
Trigger: GGTGCGCTTCGGACCCAGCCAGGGCATGTGCTCGGA...CTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAACGACAGATCGAGCGTTaGGGTCCCCGCCTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: HDGELTTYYLSSSTICNKRQIER*GPRLGA
Trigger: TGCGCCAAGGCGGGGACCCCAACGCTCGATCTGTCG...TTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGAGGTCCAGAGAGGCCTaGGGTGCCAGGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLTTSPAVPSVTKSSLSLRSREA*GARCRL
Trigger: GAGCCTGCACCTGGCACCCCAGGCCTCTCTGGACCT...CAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ATATGGCCGGGCCCTCGTCCCTTTGCCCACGTAGAAGATGGCACGGATGAAAGTGACCTAGGTACCCTCTaGTTGGCATGGACAACATGC +
Preference number: 4 (lower is better)
Translates to: IWPGPRPFAHVEDGTDESDLGTL*LAWTTC
Trigger: GCATGTTGTCCATGCCAACCAGAGGGTACCTAGGTC...ACTTTCATCCGTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCCGGCCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp AGGTGGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAGAAGCCAGCAGCATTTaGTGGGGTCAGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RWSCPGSNASYRSTGLFQEASSI*WGQSQG
Trigger: GCCCTGACTCTGACCCCACCAAATGCTGCTGGCTTC...TTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTGAAGCCAGCAGCATTTaGTGGGGTCAGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSEASSI*WGQSQG
Trigger: GCCCTGACTCTGACCCCACCAAATGCTGCTGGCTTC...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCAGAGGAAGGGGAGGACTaGAAGCCAGCAGCATTTGGT +
Preference number: 4 (lower is better)
Translates to: CPPPTMGSSLLTTSPAVPEEGED*KPAAFG
Trigger: ACCAAATGCTGCTGGCTTCCAGTCCTCCCCTTCCTC...TGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGAGGGGTTGGTGTCCGTaGGGGGCTATGAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LTTSPAVPSVTKSSLSLGRGWCP*GAMSWT
Trigger: AGTCCAGCTCATAGCCCCCCACGGACACCAACCCCT...CCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp GTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACTATCAATGGATGTCTaGTGCTCCCACAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VTKSSLSLGEICLGAPYTLSMDV*CSHRQW
Trigger: CCACTGCCTGTGGGAGCACCAGACATCCATTGATAG...TGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTCCACTATCAATGGATGTCTaGTGCTCCCACAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RAGSNVGTQHRNHWPRCPLSMDV*CSHRQW
Trigger: CCACTGCCTGTGGGAGCACCAGACATCCATTGATAG...TGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp ATATGGCCGGGCCCTCGTCCCTTTGCCCACGTAGAAGATGGCACGGATGAAAGTCTGTCAGCCAGAGCGTaGCCATGTCACTATCAATGG +
Preference number: 4 (lower is better)
Translates to: IWPGPRPFAHVEDGTDESLSARA*PCHYQW
Trigger: CCATTGATAGTGACATGGCCACGCTCTGGCTGACAG...ACTTTCATCCGTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCCGGCCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp AAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCCCAAGTCAGACACAGTaGAGACTGGCAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KRLLQKHRTVPKHLLLPFPSQTQ*RLAGAG
Trigger: GCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGG...GAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp ATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTAATCTGCCTGGACATCTaGAATACAGCCCGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: ICNKVLSQPGGDLPGCSLICLDI*NTARPQ
Trigger: CTGCGGACGGGCTGTATTCCAGATGTCCAGGCAGAT...TAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CAAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTAATCTGCCTGGACATCTaGAATACAGCCCGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: QSTFCFPSCPPPTMGSSLICLDI*NTARPQ
Trigger: CTGCGGACGGGCTGTATTCCAGATGTCCAGGCAGAT...TAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAAGCGTCTTCATCTGCCTaGACATCTGGAATACAGCCC +
Preference number: 4 (lower is better)
Translates to: SLGEICLGAPYTHTHTHKASSSA*TSGIQP
Trigger: GGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGC...TTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTGGCTGCTCAAACTGCTaGGCCAGCGCGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSGCSNC*ASASSS
Trigger: AGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCC...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AGCCCAGTAGGTTTCAGCCTCATTTTACCCAGCTCCTATTCCAGGTGGAGTTGCCCTCCTGGCAGGATCTaGCTGCTCAAACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPVGFSLILPSSYSRWSCPPGRI*LLKLLG
Trigger: GCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGG...GCAACTCCACCTGGAATAGGAGCTGGGTAAAATGAGGCTGAAACCTACTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGAGATCTGACGCACCTTaGGGCAGGCCTGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGRSDAP*GRPGGA
Trigger: AGCCCCACCAGGCCTGCCCCAAGGTGCGTCAGATCT...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp GGGCTGCTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGCAACACCGCAACCACTaGCCCAGATGTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: GLLSAWGSWNIQTFLPRLQHRNH*PRCPRS
Trigger: AGATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTG...CAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp TCTGGATCCCTAGGGCTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGTGGTTGGTGAGCGTCTaGATCCCTAGGGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SGSLGLPQYTPPVYKPPQWLVSV*IPRAST
Trigger: TGTGGAAGCCCTAGGGATCCAGACGCTCACCAACCA...CTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAGCCCTAGGGATCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp TCTGGATCCCTAGGGCTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCAGTGCCCTTGCTTCTaGTTGGTGAGCGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: SGSLGLPQYTPPVYKPPQQCPCF*LVSVWI
Trigger: GATCCAGACGCTCACCAACCAGAAGCAAGGGCACTG...CTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAGCCCTAGGGATCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp CCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTCAGTGCCCTTGCTTCTaGTTGGTGAGCGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: PPPTMGSSLLTTSPAVPSQCPCF*LVSVWI
Trigger: GATCCAGACGCTCACCAACCAGAAGCAAGGGCACTG...AGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCAGTGCCCTTGCTTCTaGTTGGTGAGCGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYQCPCF*LVSVWI
Trigger: GATCCAGACGCTCACCAACCAGAAGCAAGGGCACTG...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTCTCCCCAGGCTGGATaGCCAACTCCCCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: KRLLQKHRTVPKHLLLPFSPQAG*PTPQHS
Trigger: TGAGTGCTGGGGAGTTGGCCATCCAGCCTGGGGAGA...GAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp ACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGGGGCTGCTGTCAGCATaGGGCAGCTGGAACATTCAA +
Preference number: 4 (lower is better)
Translates to: THTHTHTPSETRDGGCCQGLLSA*GSWNIQ
Trigger: TTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC...CTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTATGGGGGAGATCTGCCTaGGTGCTCCCTACACACACA +
Preference number: 4 (lower is better)
Translates to: PSASLLVLLPRWGAHYLLWGRSA*VLPTHT
Trigger: TGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCA...TAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCAGTCCTCTCTCAGCCTaGGGGAGATCTGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KRLLQKHRTVPKHLLLPFSPLSA*GRSAWV
Trigger: CACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT...GAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp CTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGAGTCCTCTCTCAGCCTaGGGGAGATCTGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LTTSPAVPSVTKSSLSLGSPLSA*GRSAWV
Trigger: CACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT...CCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGTCCAGTCCTCTCTCAGCCTaGGGGAGATCTGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLQKHRTVPKHLLLPFLSSPLSA*GRSAWV
Trigger: CACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT...GGACAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR TCA 90 bp CTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGTCCGACGAAAGAGGCGTCTaGGCTGTAATCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LLQKHRTVPKHLLLPFLSDERGV*AVIPVP
Trigger: GGGCACTGGGATTACAGCTCAGACGCCTCTTTCGTC...GGACAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR TCA 90 bp CACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAATCTGCCTCCGTGCCCTaGGACCTAGGTACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HDGELTTYYLSSSTICNKSASVP*DLGTLW
Trigger: CCAGAGGGTACCTAGGTCTCAGGGCACGGAGGCAGA...TTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp CTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCTCAGCTGGGGTCAGTaGGAAGGCTCGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LTTYYLSSSTICNKVLSQLSWGQ*EGSGWQ
Trigger: CTGCCAGCCCGAGCCTTCTCACTGACCCCAGCTGAG...CTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp GGCTACTCCATAGACAGGGCAGGGCTGCTGGTTGCCCATTTTTATGGTTATTTCGCACGGATGAAAGTCTaGAGGCGCTCAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GYSIDRAGLLVAHFYGYFARMKV*RRSAGV
Trigger: GACCCCAGCTGAGCGCCTTCAGACTTTCATCCGTGC...GAAATAACCATAAAAATGGGCAACCAGCAGCCCTGCCCTGTCTATGGAGTAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp CTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCTTGACCGCCCATGGTaGCCAAGGGCCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTTYYLSSSTICNKVLSQLDRPW*PRASQR
Trigger: CCTCTGGGAGGCCCTTGGTCACCATGGGCGGTCAAG...CTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp AGCCCAGTAGGTTTCAGCCTCATTTTACCCAGCTCCTATTCCAGGTGGAGTTGCGTGGGGCTGTTTTCTTaGCCGCCCATGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: SPVGFSLILPSSYSRWSCVGLFS*PPMVTK
Trigger: CTTGGTCACCATGGGCGGTCAAGAAAACAGCCCCAC...GCAACTCCACCTGGAATAGGAGCTGGGTAAAATGAGGCTGAAACCTACTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACGTGGGGCTGTTTTCTTaGCCGCCCATGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNVGLFS*PPMVTK
Trigger: CTTGGTCACCATGGGCGGTCAAGAAAACAGCCCCAC...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp TCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTGGATGTCCTGGGGATaGAGCTGTCGCTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SNASYRSTGLFQSTFCFPWMSWG*SCRSPS
Trigger: TGAAGGCGAGCGACAGCTTCATCCCCAGGACATCCA...AGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR TCA 90 bp TGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCACTTGCTTCTGGTTGGTaGGCGTCTGGATCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: CPPPTMGSSLLTTSPAVPLASGW*ASGSLF
Trigger: AAACAGGGATCCAGACGCTCACCAACCAGAAGCAAG...TGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598347.2
CDS-3UTR GCA 90 bp GCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCAACTCTGGCTGCTTTTGGAGTaGTATGGAGTCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: AWGSWNIQTFLPRLDGQLWLLLE*YGVQRL
Trigger: GAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCA...GAGTTGGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp AGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTTGGCTGCTTTTGGAGTaGTATGGAGTCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: STFCFPSCPPPTMGSSLLWLLLE*YGVQRL
Trigger: GAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCA...AAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CTAGGGCTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTTCACCTCTGCATGGCTaGTTTTGGAGTGCTATGGAG +
Preference number: 4 (lower is better)
Translates to: LGLPQYTPPVYKPPQRPRSPLHG*FWSAME
Trigger: CTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGA...ACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAGCCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp CGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGACATGCAGAAGTCCCTaGCTGGTCGGTGGCAATGAC +
Preference number: 4 (lower is better)
Translates to: RLLQKHRTVPKHLLLPFLTCRSP*LVGGND
Trigger: GTCATTGCCACCGACCAGGCAGGGACTTCTGCATGT...CAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAACATGCAGAAGTCCCTaGCTGGTCGGTGGCAATGAC +
Preference number: 4 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPTCRSP*LVGGND
Trigger: GTCATTGCCACCGACCAGGCAGGGACTTCTGCATGT...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCTTGGCATGGACAACATaGAGAAGTCCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LSAWGSWNIQTFLPRLDGLAWTT*RSPCLV
Trigger: GACCAGGCAGGGACTTCTGCATGTTGTCCATGCCAA...GCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp TGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACATTGGCATGGACAACATaGAGAAGTCCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: WGRSAWVLPTHTHTHTNTLAWTT*RSPCLV
Trigger: GACCAGGCAGGGACTTCTGCATGTTGTCCATGCCAA...TGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGACGGGCATTCAGTTCTaGCTCCGTGCCCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: LTTSPAVPSVTKSSLSLGTGIQF*LRALRP
Trigger: AGGTCTCAGGGCACGGAGGCAGAACTGAATGCCCGT...CCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTGTCAGAGTCAGGGCCTaGAGACGGGCATTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSVRVRA*RRAFSS
Trigger: AGAACTGAATGCCCGTCTGCAGGCCCTGACTCTGAC...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGTCAGAGTCAGGGCCTaGAGACGGGCATTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPVRVRA*RRAFSS
Trigger: AGAACTGAATGCCCGTCTGCAGGCCCTGACTCTGAC...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp AGGTGGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAATCAATGGATGTCTGGTaGTCCCACAGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RWSCPGSNASYRSTGLFQSMDVW*SHRQWQ
Trigger: CTGCCACTGCCTGTGGGAGCACCAGACATCCATTGA...TTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp TGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTCCAAGATCTCAATGGATGTCTGGTaGTCCCACAGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WKQCRDTTPQPLAQMSKISMDVW*SHRQWQ
Trigger: CTGCCACTGCCTGTGGGAGCACCAGACATCCATTGA...GATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR GCA 90 bp CCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTATCAATGGATGTCTGGTaGTCCCACAGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PPTMGSSLLTTSPAVPSVSMDVW*SHRQWQ
Trigger: CTGCCACTGCCTGTGGGAGCACCAGACATCCATTGA...TACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGGCCACCTGTAGAGCTTaGCTCATCCTCTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGEATCRA*LILCQP
Trigger: TGGCTGACAGAGGATGAGGCAAGCTCTACAGGTGGC...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp GGGCTGCTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGAGGATTCTCACCAAGTaGTCGGAGTCCCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GLLSAWGSWNIQTFLPRLRILTK*SESLQQ
Trigger: TTGCTGAAGGGACTCCGAGCACTTGGTGAGAATCCT...CAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp GCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCAACTCTGCTGGTGGTACAACTaGCTGGTGAAGGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: AWGSWNIQTFLPRLDGQLCWWYN*LVKGVM
Trigger: CATCACACCCTTCACCAGGCAGTTGTACCACCAGCA...GAGTTGGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp AGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACACATCTGGCTGCTCAAACTaGTGGGCCAGCGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RSAWVLPTHTHTHTNTHTSGCSN*WASASS
Trigger: TGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGA...TGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp GGCTACTCCATAGACAGGGCAGGGCTGCTGGTTGCCCATTTTTATGGTTATTTCGGGCCCTCGTCCCTTTaGCCACGTAGAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: GYSIDRAGLLVAHFYGYFGPSSL*PRRRWH
Trigger: GTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCC...GAAATAACCATAAAAATGGGCAACCAGCAGCCCTGCCCTGTCTATGGAGTAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp TCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTATCCACAGCGACCACGTaGTGGAAGCAATGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: SCPPPTMGSSLLTTSPAVSTATT*WKQCRD
Trigger: GTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGA...TACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCATCCACAGCGACCACGTaGTGGAAGCAATGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPSTATT*WKQCRD
Trigger: GTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGA...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGGGAGATCTGCCTGGGTaGTCCCTACACACACACACA +
Preference number: 4 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGEGDLPG*SLHTHT
Trigger: TGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGCCGAAGCGCACCGCCTaGTCGGTCGATTTCCTACTT +
Preference number: 4 (lower is better)
Translates to: LTTSPAVPSVTKSSLSLGPKRTA*SVDFLL
Trigger: AAGTAGGAAATCGACCGACCAGGCGGTGCGCTTCGG...CCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000594072.6
CDS-3UTR CCA 90 bp CTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGAGGTCCAGAGAGGCCTaGGGTGCCAGGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LTTYYLSSSTICNKVLSQRSREA*GARCRL
Trigger: GAGCCTGCACCTGGCACCCCAGGCCTCTCTGGACCT...CTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCGCTTTTGGAGTGCTATaGAGTCCAGCGTCTCATCGG +
Preference number: 4 (lower is better)
Translates to: LLPFLSSSHDGELTTYYLAFGVL*SPASHR
Trigger: CCGATGAGACGCTGGACTCCATAGCACTCCAAAAGC...GAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TGCCCTTGCTTCTGGTTGGTGAGCGTCTGGATCCCTAGGGCTTCCACAATACACGCTTTTGGAGTGCTATaGAGTCCAGCGTCTCATCGG +
Preference number: 4 (lower is better)
Translates to: CPCFWLVSVWIPRASTIHAFGVL*SPASHR
Trigger: CCGATGAGACGCTGGACTCCATAGCACTCCAAAAGC...GTGTATTGTGGAAGCCCTAGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTGCTTTTGGAGTGCTATaGAGTCCAGCGTCTCATCGG +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTAFGVL*SPASHR
Trigger: CCGATGAGACGCTGGACTCCATAGCACTCCAAAAGC...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACTGCATGGCTGCTTTTaGAGTGCTATGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WGRSAWVLPTHTHTHTNTLHGCF*SAMESS
Trigger: GCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAG...TGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp ACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCTGCATGGCTGCTTTTaGAGTGCTATGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTPSETRDGGCCQLHGCF*SAMESS
Trigger: GCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAG...CTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp TCTGGATCCCTAGGGCTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCTGCATGGCTGCTTTTaGAGTGCTATGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGSLGLPQYTPPVYKPPQLHGCF*SAMESS
Trigger: GCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAG...CTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAGCCCTAGGGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCTGCATGGCTGCTTTTaGAGTGCTATGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYLHGCF*SAMESS
Trigger: GCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAG...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTACCCTCTGGTTGGCATaGACAACATGCAGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTTLWLA*TTCRSP
Trigger: GGGACTTCTGCATGTTGTCCATGCCAACCAGAGGGT...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTACCCTCTGGTTGGCATaGACAACATGCAGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: PPPTMGSSLLTTSPAVPSTLWLA*TTCRSP
Trigger: GGGACTTCTGCATGTTGTCCATGCCAACCAGAGGGT...AGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCATGACCTAGGTACCCTCTaGTTGGCATGGACAACATGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTPSETRDGGCCQHDLGTL*LAWTTC
Trigger: GCATGTTGTCCATGCCAACCAGAGGGTACCTAGGTC...ATGCTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTCTATCAATGGATGTCTaGTGCTCCCACAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTLSMDV*CSHRQW
Trigger: CCACTGCCTGTGGGAGCACCAGACATCCATTGATAG...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCACTGTCAGCCAGAGCGTaGCCATGTCACTATCAATGG +
Preference number: 4 (lower is better)
Translates to: CPPPTMGSSLLTTSPAVPLSARA*PCHYQW
Trigger: CCATTGATAGTGACATGGCCACGCTCTGGCTGACAG...TGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCTGTCAGCCAGAGCGTaGCCATGTCACTATCAATGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTPSETRDGGCCLSARA*PCHYQW
Trigger: CCATTGATAGTGACATGGCCACGCTCTGGCTGACAG...ACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGAGACACAGTGGAGACTaGCAGGTGCCGGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLTTSPAVPSVTKSSLSLRHSGD*QVPARA
Trigger: GGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCT...CAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGGCTTCTTCCAGCTGCTaGTGGTACAACTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RLLQKHRTVPKHLLLPFLASSSC*WYNCLV
Trigger: CACCAGGCAGTTGTACCACCAGCAGCTGGAAGAAGC...CAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp CCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCATCTGCCTGGACATCTaGAATACAGCCCGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: PGSNASYRSTGLFQSTFCICLDI*NTARPQ
Trigger: CTGCGGACGGGCTGTATTCCAGATGTCCAGGCAGAT...GCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTGCGTCTTCATCTGCCTaGACATCTGGAATACAGCCC +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTASSSA*TSGIQP
Trigger: GGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGC...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACGCGTCTTCATCTGCCTaGACATCTGGAATACAGCCC +
Preference number: 4 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYASSSA*TSGIQP
Trigger: GGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGC...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAACACCGCAACCACTaGCCCAGATGTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTPSETRDGGCCQHRNH*PRCPRS
Trigger: AGATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTG...ACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCACAGCGACCACGTGCTaGAAGCAATGTAGGGACACA +
Preference number: 4 (lower is better)
Translates to: LSAWGSWNIQTFLPRLDGTATTC*KQCRDT
Trigger: TGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGT...GCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTATGGTTGGTGAGCGTCTaGATCCCTAGGGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: PSASLLVLLPRWGAHYLLWLVSV*IPRAST
Trigger: TGTGGAAGCCCTAGGGATCCAGACGCTCACCAACCA...TAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGTGGTTGGTGAGCGTCTaGATCCCTAGGGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGEWLVSV*IPRAST
Trigger: TGTGGAAGCCCTAGGGATCCAGACGCTCACCAACCA...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp TCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACAGTGCCCTTGCTTCTaGTTGGTGAGCGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: SCPPPTMGSSLLTTSPAVQCPCF*LVSVWI
Trigger: GATCCAGACGCTCACCAACCAGAAGCAAGGGCACTG...TACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGTCTCCCCAGGCTGGATaGCCAACTCCCCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGSPQAG*PTPQHS
Trigger: TGAGTGCTGGGGAGTTGGCCATCCAGCCTGGGGAGA...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp GTAGCAATGAGGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTGGTGGGGGGCTGCTGTCAGCATaGGGCAGCTGGAACATTCAA +
Preference number: 4 (lower is better)
Translates to: VAMRTTRGHSCRHLGIGGGLLSA*GSWNIQ
Trigger: TTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC...CCCACCAATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATTGCTAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp AGCCCAGTAGGTTTCAGCCTCATTTTACCCAGCTCCTATTCCAGGTGGAGTTGCTGGGGGAGATCTGCCTaGGTGCTCCCTACACACACA +
Preference number: 4 (lower is better)
Translates to: SPVGFSLILPSSYSRWSCWGRSA*VLPTHT
Trigger: TGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCA...GCAACTCCACCTGGAATAGGAGCTGGGTAAAATGAGGCTGAAACCTACTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp CAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTTGGGGGAGATCTGCCTaGGTGCTCCCTACACACACA +
Preference number: 4 (lower is better)
Translates to: QTPLTEAPDCSKAPSASLWGRSA*VLPTHT
Trigger: TGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCA...AAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp GGGCTGCTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGACAGGGCAGGGCTGCTaGTTGCCCATTTTTATGGTT +
Preference number: 4 (lower is better)
Translates to: GLLSAWGSWNIQTFLPRLTGQGC*LPIFMV
Trigger: AACCATAAAAATGGGCAACCAGCAGCCCTGCCCTGT...CAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
3UTR CAA 72 bp GGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATaGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTG +
Preference number: 4 (lower is better)
Translates to: GRPEVTLVAILV*VGFGRLLYCNL
Trigger: CAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp GGCTACTCCATAGACAGGGCAGGGCTGCTGGTTGCCCATTTTTATGGTTATTTCGACGAAAGAGGCGTCTaGGCTGTAATCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GYSIDRAGLLVAHFYGYFDERGV*AVIPVP
Trigger: GGGCACTGGGATTACAGCTCAGACGCCTCTTTCGTC...GAAATAACCATAAAAATGGGCAACCAGCAGCCCTGCCCTGTCTATGGAGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp CATCTGGGAATGCAGCCCAGTAGGTTTCAGCCTCATTTTACCCAGCTCCTATTCAGACCTCAACCGCTGTaGCGAAAGAGGCGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HLGMQPSRFQPHFTQLLFRPQPL*RKRRLS
Trigger: GCTCAGACGCCTCTTTCGTCACAGCGGTTGAGGTCT...GAATAGGAGCTGGGTAAAATGAGGCTGAAACCTACTGGGCTGCATTCCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp AGGTGGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAAGGGTGTGATGGGGTaGGGATTCTCACCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: RWSCPGSNASYRSTGLFQKGVMG*GFSPSA
Trigger: AGCACTTGGTGAGAATCCTCACCCCATCACACCCTT...TTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTAAGGGTGTGATGGGGTaGGGATTCTCACCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSKGVMG*GFSPSA
Trigger: AGCACTTGGTGAGAATCCTCACCCCATCACACCCTT...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp CTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGGATCCCTGTTTTCTTaGCCGCCCATGGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: LTTSPAVPSVTKSSLSLGGSLFS*PPMVTK
Trigger: CTTGGTCACCATGGGCGGTCAAGAAAACAGGGATCC...CCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000598347.2
CDS-3UTR GCA 90 bp CCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTTCACCTCTGCATGGCTaGTTTTGGAGTGCTATGGAG +
Preference number: 4 (lower is better)
Translates to: PPPTMGSSLLTTSPAVPSSPLHG*FWSAME
Trigger: CTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGA...AGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp TGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCTCACCTCTGCATGGCTaGTTTTGGAGTGCTATGGAG +
Preference number: 4 (lower is better)
Translates to: CQHGAAGTFKHFSPGWMASPLHG*FWSAME
Trigger: CTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGA...GGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTATTGGCATGGACAACATaGAGAAGTCCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PSASLLVLLPRWGAHYLLLAWTT*RSPCLV
Trigger: GACCAGGCAGGGACTTCTGCATGTTGTCCATGCCAA...TAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp AAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCGCCACCTGTAGAGCTTaGCTCATCCTCTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KRLLQKHRTVPKHLLLPFATCRA*LILCQP
Trigger: TGGCTGACAGAGGATGAGGCAAGCTCTACAGGTGGC...GAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp GGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCATGCTGGTGGTACAACTaGCTGGTGAAGGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: GVAQVQTPLTEAPDCSKACWWYN*LVKGVM
Trigger: CATCACACCCTTCACCAGGCAGTTGTACCACCAGCA...TGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp GGGAGTGTAGCAATGAGGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTGGAGATCTGCCTGGGTaGTCCCTACACACACACACA +
Preference number: 4 (lower is better)
Translates to: GSVAMRTTRGHSCRHLGIGDLPG*SLHTHT
Trigger: TGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC...AATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATTGCTACACTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp TTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCTATTCCAGGTGGAGTTaGCCAGGTTCAAACGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSSSHDGELTTYYLSSSTYSRWS*PGSNAS
Trigger: AGAGGCGTTTGAACCTGGGCAACTCCACCTGGAATA...GGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTAAACTCTGGGCCAAGTaGTCGGAGTCCCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSKLWAK*SESLQQ
Trigger: TTGCTGAAGGGACTCCGAGCACTTGGCCCAGAGTTT...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGCCGAAGCGCACCGCCTaGTCGGTCGATTTCCTACTT +
Preference number: 4 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGPKRTA*SVDFLL
Trigger: AAGTAGGAAATCGACCGACCAGGCGGTGCGCTTCGG...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000594072.6
CDS-3UTR CCA 90 bp CCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAGCTTTTGGAGTGCTATaGAGTCCAGCGTCTCATCGG +
Preference number: 4 (lower is better)
Translates to: PPTMGSSLLTTSPAVPSVAFGVL*SPASHR
Trigger: CCGATGAGACGCTGGACTCCATAGCACTCCAAAAGC...TACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGGTTGTCACCTCTGCATaGCTGCTTTTGGAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: TTCWKQCRDTTPQPLAQMVVTSA*LLLECY
Trigger: ATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAAC...CATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAACCCTCTGGTTGGCATaGACAACATGCAGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPTLWLA*TTCRSP
Trigger: GGGACTTCTGCATGTTGTCCATGCCAACCAGAGGGT...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGGACCTAGGTACCCTCTaGTTGGCATGGACAACATGC +
Preference number: 4 (lower is better)
Translates to: RLLQKHRTVPKHLLLPFLDLGTL*LAWTTC
Trigger: GCATGTTGTCCATGCCAACCAGAGGGTACCTAGGTC...CAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACTATCAATGGATGTCTaGTGCTCCCACAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SCPPPTMGSSLLTTSPAVLSMDV*CSHRQW
Trigger: CCACTGCCTGTGGGAGCACCAGACATCCATTGATAG...TACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AAGCCTCCACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCCATGTCACTATCAATaGATGTCTGGTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: KPPQRPRAGSNVGTQHRNPCHYQ*MSGAPT
Trigger: TGTGGGAGCACCAGACATCCATTGATAGTGACATGG...GTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CCA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTCTGTCAGCCAGAGCGTaGCCATGTCACTATCAATGG +
Preference number: 4 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSLSARA*PCHYQW
Trigger: CCATTGATAGTGACATGGCCACGCTCTGGCTGACAG...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACATCTGCCTGGACATCTaGAATACAGCCCGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNICLDI*NTARPQ
Trigger: CTGCGGACGGGCTGTATTCCAGATGTCCAGGCAGAT...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTTGGTTGGTGAGCGTCTaGATCCCTAGGGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: TPLTEAPDCSKAPSASLLWLVSV*IPRAST
Trigger: TGTGGAAGCCCTAGGGATCCAGACGCTCACCAACCA...AAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACTGGTTGGTGAGCGTCTaGATCCCTAGGGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNWLVSV*IPRAST
Trigger: TGTGGAAGCCCTAGGGATCCAGACGCTCACCAACCA...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGCATTTCTCCCCAGGCTaGATGGCCAACTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGHFSPG*MANSPA
Trigger: TGCTGGGGAGTTGGCCATCCAGCCTGGGGAGAAATG...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTAGCTCCTATTCCAGGTaGAGTTGCCCAGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTSSYSR*SCPGSN
Trigger: GTTTGAACCTGGGCAACTCCACCTGGAATAGGAGCT...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp AAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACCTCTTGTCGCCATCTTaGTATTGGTGGGTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: KAPSASLLVLLPRWGAHYLLSPS*YWWVLA
Trigger: GGCCAAAACCCACCAATACCAAGATGGCGACAAGAG...GTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp AGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTCTCTTGTCGCCATCTTaGTATTGGTGGGTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: STFCFPSCPPPTMGSSLLLLSPS*YWWVLA
Trigger: GGCCAAAACCCACCAATACCAAGATGGCGACAAGAG...AAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR TCA 90 bp TGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAGCAGGTTCTTTGCACGGATGAAAGTCTaGAGGCGCTCAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: WWVLAGFFTATCFISRFFARMKV*RRSAGV
Trigger: GACCCCAGCTGAGCGCCTTCAGACTTTCATCCGTGC...AAAGAACCTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp CGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGTCACCTCTGCATGGCTaGTTTTGGAGTGCTATGGAG +
Preference number: 4 (lower is better)
Translates to: RLLQKHRTVPKHLLLPFLSPLHG*FWSAME
Trigger: CTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGA...CAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp TCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTTGGCATGGACAACATaGAGAAGTCCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SNASYRSTGLFQSTFCFPLAWTT*RSPCLV
Trigger: GACCAGGCAGGGACTTCTGCATGTTGTCCATGCCAA...AGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp ACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGACGGGCATTCAGTTCTaGCTCCGTGCCCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: TMGSSLLTTSPAVPSVTKTGIQF*LRALRP
Trigger: AGGTCTCAGGGCACGGAGGCAGAACTGAATGCCCGT...CTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAACGGGCATTCAGTTCTaGCTCCGTGCCCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: HDGELTTYYLSSSTICNKTGIQF*LRALRP
Trigger: AGGTCTCAGGGCACGGAGGCAGAACTGAATGCCCGT...TTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGCAGGATCTGGCTaGTCAAACTGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSLAGSG*SNCWAS
Trigger: GCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAG...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCGGGCCCTCGTCCCTTTaGCCACGTAGAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSGPSSL*PRRRWH
Trigger: GTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCC...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CAAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTATTCCAAAGCACCTTCTaGTTCCCTTCTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QSTFCFPSCPPPTMGSSLFQSTF*FPSCPP
Trigger: AGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTGGAA...TAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp GCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCAACTCTTCCAAAGCACCTTCTaGTTCCCTTCTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AWGSWNIQTFLPRLDGQLFQSTF*FPSCPP
Trigger: AGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTGGAA...GAGTTGGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp AAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTTCCAAAGCACCTTCTaGTTCCCTTCTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KHLLLPFLSSSHDGELTTFQSTF*FPSCPP
Trigger: AGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTGGAA...AGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp AGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTTTCCAAAGCACCTTCTaGTTCCCTTCTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: STFCFPSCPPPTMGSSLLFQSTF*FPSCPP
Trigger: AGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTGGAA...AAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGAGGCACGCGCCACCATaGCCAGCTAATTTTGGTATT +
Preference number: 4 (lower is better)
Translates to: RLLQKHRTVPKHLLLPFLRHAPP*PANFGI
Trigger: AATACCAAAATTAGCTGGGCATGGTGGCGCGTGCCT...CAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAACTCTGGGCCAAGTaGTCGGAGTCCCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNKLWAK*SESLQQ
Trigger: TTGCTGAAGGGACTCCGAGCACTTGGCCCAGAGTTT...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp AGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACACAAAACTCTGGGCCAAGTaGTCGGAGTCCCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RSAWVLPTHTHTHTNTHTKLWAK*SESLQQ
Trigger: TTGCTGAAGGGACTCCGAGCACTTGGCCCAGAGTTT...TGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp CTTGTCGCCATCTTGGTATTGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGGCTTTTGGAGTGCTATaGAGTCCAGCGTCTCATCGG +
Preference number: 4 (lower is better)
Translates to: LVAILVLVGFGRLLYCNLAFGVL*SPASHR
Trigger: CCGATGAGACGCTGGACTCCATAGCACTCCAAAAGC...CAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATGGCGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACCTGCATGGCTGCTTTTaGAGTGCTATGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNLHGCF*SAMESS
Trigger: GCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAG...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGGTTGTCACCTCTGCATaGCTGCTTTTGGAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SLLVLLPRWGAHYLLPLQVVTSA*LLLECY
Trigger: ATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAAC...CTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCAGTTGTCACCTCTGCATaGCTGCTTTTGGAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: CPPPTMGSSLLTTSPAVPVVTSA*LLLECY
Trigger: ATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAAC...TGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CATCTTGGTATTGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAGGGAGTGTCCGAGGCTaGGTCCTCAGCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: HLGIGGFWPASLLQPVLSGSVRG*VLSSRD
Trigger: GTCTCTGGAGCTGAGGACCCAGCCTCGGACACTCCC...TGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp AAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCACCCTCTGGTTGGCATaGACAACATGCAGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: KRLLQKHRTVPKHLLLPFTLWLA*TTCRSP
Trigger: GGGACTTCTGCATGTTGTCCATGCCAACCAGAGGGT...GAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACGACCTAGGTACCCTCTaGTTGGCATGGACAACATGC +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNDLGTL*LAWTTC
Trigger: GCATGTTGTCCATGCCAACCAGAGGGTACCTAGGTC...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CATCTGGGAATGCAGCCCAGTAGGTTTCAGCCTCATTTTACCCAGCTCCTATTCGAGGAAGGGGAGGACTaGAAGCCAGCAGCATTTGGT +
Preference number: 4 (lower is better)
Translates to: HLGMQPSRFQPHFTQLLFEEGED*KPAAFG
Trigger: ACCAAATGCTGCTGGCTTCCAGTCCTCCCCTTCCTC...GAATAGGAGCTGGGTAAAATGAGGCTGAAACCTACTGGGCTGCATTCCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp CTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGTCCCTATCAATGGATGTCTaGTGCTCCCACAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLQKHRTVPKHLLLPFLSLSMDV*CSHRQW
Trigger: CCACTGCCTGTGGGAGCACCAGACATCCATTGATAG...GGACAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp CTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGTCCCTGTCAGCCAGAGCGTaGCCATGTCACTATCAATGG +
Preference number: 4 (lower is better)
Translates to: LLQKHRTVPKHLLLPFLSLSARA*PCHYQW
Trigger: CCATTGATAGTGACATGGCCACGCTCTGGCTGACAG...GGACAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTCTGTCAGCCAGAGCGTaGCCATGTCACTATCAATGG +
Preference number: 4 (lower is better)
Translates to: SNASYRSTGLFQSTFCFPLSARA*PCHYQW
Trigger: CCATTGATAGTGACATGGCCACGCTCTGGCTGACAG...AGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTCCAAGTCAGACACAGTaGAGACTGGCAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPPSQTQ*RLAGAG
Trigger: GCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGG...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp GGAATGCAGCCCAGTAGGTTTCAGCCTCATTTTACCCAGCTCCTATTCCAGGTGGCGTCTTCATCTGCCTaGACATCTGGAATACAGCCC +
Preference number: 4 (lower is better)
Translates to: GMQPSRFQPHFTQLLFQVASSSA*TSGIQP
Trigger: GGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGC...CACCTGGAATAGGAGCTGGGTAAAATGAGGCTGAAACCTACTGGGCTGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp GGGAGTGTAGCAATGAGGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTCAACACCGCAACCACTaGCCCAGATGTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: GSVAMRTTRGHSCRHLGIQHRNH*PRCPRS
Trigger: AGATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTG...AATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATTGCTACACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACACAGCGACCACGTGCTaGAAGCAATGTAGGGACACA +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNTATTC*KQCRDT
Trigger: TGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGT...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTTCTCCCCAGGCTGGATaGCCAACTCCCCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPSPQAG*PTPQHS
Trigger: TGAGTGCTGGGGAGTTGGCCATCCAGCCTGGGGAGA...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGGCTGCTGTCAGCATaGGGCAGCTGGAACATTCAA +
Preference number: 4 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGGLLSA*GSWNIQ
Trigger: TTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAATGGGGGAGATCTGCCTaGGTGCTCCCTACACACACA +
Preference number: 4 (lower is better)
Translates to: HDGELTTYYLSSSTICNKWGRSA*VLPTHT
Trigger: TGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCA...TTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp CTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGGACGAAAGAGGCGTCTaGGCTGTAATCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LTTYYLSSSTICNKVLSQDERGV*AVIPVP
Trigger: GGGCACTGGGATTACAGCTCAGACGCCTCTTTCGTC...CTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTAGACCTCAACCGCTGTaGCGAAAGAGGCGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPRPQPL*RKRRLS
Trigger: GCTCAGACGCCTCTTTCGTCACAGCGGTTGAGGTCT...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR TCA 90 bp CTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCTTGCTTCTGGTTGGTaGGCGTCTGGATCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: LTTYYLSSSTICNKVLSQLASGW*ASGSLG
Trigger: CCCTAGGGATCCAGACGCTCACCAACCAGAAGCAAG...CTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR TCA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTCACACACACCCCTTCTaGAACCAGAGATGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPHTHPF*NQRWGL
Trigger: CAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTG...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGTCCTCACCTCTGCATGGCTaGTTTTGGAGTGCTATGGAG +
Preference number: 4 (lower is better)
Translates to: LLQKHRTVPKHLLLPFLSSPLHG*FWSAME
Trigger: CTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGA...GGACAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp CTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGACATGCAGAAGTCCCTaGCTGGTCGGTGGCAATGAC +
Preference number: 4 (lower is better)
Translates to: LLTTSPAVPSVTKSSLSLTCRSP*LVGGND
Trigger: GTCATTGCCACCGACCAGGCAGGGACTTCTGCATGT...CAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCAGAGTCAGGGCCTaGAGACGGGCATTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HDGELTTYYLSSSTICNKVRVRA*RRAFSS
Trigger: AGAACTGAATGCCCGTCTGCAGGCCCTGACTCTGAC...TTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGTCAATGGATGTCTGGTaGTCCCACAGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLTTSPAVPSVTKSSLSLSMDVW*SHRQWQ
Trigger: CTGCCACTGCCTGTGGGAGCACCAGACATCCATTGA...CAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp ACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGGCCACCTGTAGAGCTTaGCTCATCCTCTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TMGSSLLTTSPAVPSVTKATCRA*LILCQP
Trigger: TGGCTGACAGAGGATGAGGCAAGCTCTACAGGTGGC...CTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp GTATTGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAGCAGGTTTCTGGCTGCTCAAACTaGTGGGCCAGCGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VLVGFGRLLYCNLFYQQVSGCSN*WASASS
Trigger: TGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGA...AACCTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp ACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCACAGCGACCACGTaGTGGAAGCAATGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: TMGSSLLTTSPAVPSVTKSTATT*WKQCRD
Trigger: GTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGA...CTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAATCCACAGCGACCACGTaGTGGAAGCAATGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: HDGELTTYYLSSSTICNKSTATT*WKQCRD
Trigger: GTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGA...TTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR GCA 90 bp CTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGAGATCTGCCTGGGTaGTCCCTACACACACACACA +
Preference number: 4 (lower is better)
Translates to: LLTTSPAVPSVTKSSLSLGDLPG*SLHTHT
Trigger: TGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC...CAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp CCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAGGCCGGCTTCTTTACTaGAACCTGTTTTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: PPTMGSSLLTTSPAVPSVGRLLY*NLFYQQ
Trigger: CTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCC...TACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGTTGTCACCTCTGCATaGCTGCTTTTGGAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPVVTSA*LLLECY
Trigger: ATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAAC...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp GGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACAGTTGTCACCTCTGCATaGCTGCTTTTGGAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: GDLPGCSLHTHTHTQTHTVVTSA*LLLECY
Trigger: ATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAAC...TGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGACCCTCTGGTTGGCATaGACAACATGCAGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGTLWLA*TTCRSP
Trigger: GGGACTTCTGCATGTTGTCCATGCCAACCAGAGGGT...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGAAGCCAGCAGCATTTaGTGGGGTCAGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPEASSI*WGQSQG
Trigger: GCCCTGACTCTGACCCCACCAAATGCTGCTGGCTTC...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CATCTTGGTATTGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAAGGGGTTGGTGTCCGTaGGGGGCTATGAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: HLGIGGFWPASLLQPVLSRGWCP*GAMSWT
Trigger: AGTCCAGCTCATAGCCCCCCACGGACACCAACCCCT...TGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp CCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCCCATGTCACTATCAATaGATGTCTGGTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PGSNASYRSTGLFQSTFCPCHYQ*MSGAPT
Trigger: TGTGGGAGCACCAGACATCCATTGATAGTGACATGG...GCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp CCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCATGTCACTATCAATaGATGTCTGGTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PSASLLVLLPRWGAHYLLPCHYQ*MSGAPT
Trigger: TGTGGGAGCACCAGACATCCATTGATAGTGACATGG...TAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGTCTTCCAGCTGCTGGTaGTACAACTGCCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGSSSCW*YNCLVK
Trigger: CTTCACCAGGCAGTTGTACCACCAGCAGCTGGAAGA...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCGGCTGCTCAAACTGCTaGGCCAGCGCGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSGCSNC*ASASSS
Trigger: AGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCC...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CATCTTGGTATTGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCACCAGAGGTGGACATATaGCCGGGCCCTCGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HLGIGGFWPASLLQPVLSPEVDI*PGPRPF
Trigger: AAAGGGACGAGGGCCCGGCCATATGTCCACCTCTGG...TGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCATTTCTCCCCAGGCTaGATGGCCAACTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSHFSPG*MANSPA
Trigger: TGCTGGGGAGTTGGCCATCCAGCCTGGGGAGAAATG...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp AAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTCAGCATGGGGCAGCTaGAACATTCAAACATTTCTC +
Preference number: 4 (lower is better)
Translates to: KAPSASLLVLLPRWGAHYSAWGS*NIQTFL
Trigger: GAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGA...GTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTAGCTCCTATTCCAGGTaGAGTTGCCCAGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SNASYRSTGLFQSTFCFPSSYSR*SCPGSN
Trigger: GTTTGAACCTGGGCAACTCCACCTGGAATAGGAGCT...AGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAGCTCCTATTCCAGGTaGAGTTGCCCAGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNSSYSR*SCPGSN
Trigger: GTTTGAACCTGGGCAACTCCACCTGGAATAGGAGCT...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCAAATGCTTTAACCATCTaGGAATGCAGCCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: CPPPTMGSSLLTTSPAVPNALTI*ECSPVG
Trigger: ACCTACTGGGCTGCATTCCCAGATGGTTAAAGCATT...TGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp AGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTAATGCTTTAACCATCTaGGAATGCAGCCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: STFCFPSCPPPTMGSSLLNALTI*ECSPVG
Trigger: ACCTACTGGGCTGCATTCCCAGATGGTTAAAGCATT...AAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCTGGGCTTCTTCCAGCTaGTGGTGGTACAACTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSWASSS*WWYNCL
Trigger: CAGGCAGTTGTACCACCAGCAGCTGGAAGAAGCCCA...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp CCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAGGCAGGGCTGCTGGTTaGCCATTTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: PPTMGSSLLTTSPAVPSVGRAAG*PFLWLF
Trigger: AAATAACCATAAAAATGGGCAACCAGCAGCCCTGCC...TACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp CTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGACCTAGGTACCCTCTaGTTGGCATGGACAACATGC +
Preference number: 4 (lower is better)
Translates to: LLTTSPAVPSVTKSSLSLDLGTL*LAWTTC
Trigger: GCATGTTGTCCATGCCAACCAGAGGGTACCTAGGTC...CAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCGAGGAAGGGGAGGACTaGAAGCCAGCAGCATTTGGT +
Preference number: 4 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSEEGED*KPAAFG
Trigger: ACCAAATGCTGCTGGCTTCCAGTCCTCCCCTTCCTC...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGCTATCAATGGATGTCTaGTGCTCCCACAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLTTSPAVPSVTKSSLSLLSMDV*CSHRQW
Trigger: CCACTGCCTGTGGGAGCACCAGACATCCATTGATAG...CAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTCCATGTCACTATCAATaGATGTCTGGTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: TPLTEAPDCSKAPSASLLPCHYQ*MSGAPT
Trigger: TGTGGGAGCACCAGACATCCATTGATAGTGACATGG...AAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp GGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCATGTCACTATCAATaGATGTCTGGTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: GSNASYRSTGLFQSTFCFPCHYQ*MSGAPT
Trigger: TGTGGGAGCACCAGACATCCATTGATAGTGACATGG...GAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACCCATGTCACTATCAATaGATGTCTGGTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: SHDGELTTYYLSSSTICNPCHYQ*MSGAPT
Trigger: TGTGGGAGCACCAGACATCCATTGATAGTGACATGG...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGCTTCTTCCAGCTGCTaGTGGTACAACTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPASSSC*WYNCLV
Trigger: CACCAGGCAGTTGTACCACCAGCAGCTGGAAGAAGC...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp CACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAACAGCGACCACGTGCTaGAAGCAATGTAGGGACACA +
Preference number: 4 (lower is better)
Translates to: HDGELTTYYLSSSTICNKTATTC*KQCRDT
Trigger: TGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGT...TTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CCA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCGGGCTGCTGTCAGCATaGGGCAGCTGGAACATTCAA +
Preference number: 4 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSGLLSA*GSWNIQ
Trigger: TTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp GGGAGTGTAGCAATGAGGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTCCATCTTGGTATTGGTaGGTTTTGGCCGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GSVAMRTTRGHSCRHLGIPSWYW*VLAGFF
Trigger: AAAGAAGCCGGCCAAAACCCACCAATACCAAGATGG...AATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATTGCTACACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp CTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGAGGATTCTCACCAAGTaGTCGGAGTCCCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LLTTSPAVPSVTKSSLSLRILTK*SESLQQ
Trigger: TTGCTGAAGGGACTCCGAGCACTTGGTGAGAATCCT...CAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp CATCTGGGAATGCAGCCCAGTAGGTTTCAGCCTCATTTTACCCAGCTCCTATTCGGCCGGCTTCTTTACTaGAACCTGTTTTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: HLGMQPSRFQPHFTQLLFGRLLY*NLFYQQ
Trigger: CTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCC...GAATAGGAGCTGGGTAAAATGAGGCTGAAACCTACTGGGCTGCATTCCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp ACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGAGGCACGCGCCACCATaGCCAGCTAATTTTGGTATT +
Preference number: 4 (lower is better)
Translates to: TMGSSLLTTSPAVPSVTKRHAPP*PANFGI
Trigger: AATACCAAAATTAGCTGGGCATGGTGGCGCGTGCCT...CTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR GCA 90 bp AAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCGGCAGGGCTGCTGGTTaGCCATTTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: KRLLQKHRTVPKHLLLPFGRAAG*PFLWLF
Trigger: AAATAACCATAAAAATGGGCAACCAGCAGCCCTGCC...GAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp CTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCTGCATGGCTGCTTTTaGAGTGCTATGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LTTYYLSSSTICNKVLSQLHGCF*SAMESS
Trigger: GCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAG...CTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp TGGTGGGTTTTGGCCGGCTTCTTTACTGCAACCTGTTTTATCAGCAGGTTCTTTGACCTAGGTACCCTCTaGTTGGCATGGACAACATGC +
Preference number: 4 (lower is better)
Translates to: WWVLAGFFTATCFISRFFDLGTL*LAWTTC
Trigger: GCATGTTGTCCATGCCAACCAGAGGGTACCTAGGTC...AAAGAACCTGCTGATAAAACAGGTTGCAGTAAAGAAGCCGGCCAAAACCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGCGTCTTCATCTGCCTaGACATCTGGAATACAGCCC +
Preference number: 4 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPASSSA*TSGIQP
Trigger: GGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGC...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGTCCTCAGCATGGGGCAGCTaGAACATTCAAACATTTCTC +
Preference number: 4 (lower is better)
Translates to: LLQKHRTVPKHLLLPFLSSAWGS*NIQTFL
Trigger: GAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGA...GGACAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp ACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTTCAGCATGGGGCAGCTaGAACATTCAAACATTTCTC +
Preference number: 4 (lower is better)
Translates to: TPLTEAPDCSKAPSASLLSAWGS*NIQTFL
Trigger: GAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGA...AAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp AAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTCAGCATGGGGCAGCTaGAACATTCAAACATTTCTC +
Preference number: 4 (lower is better)
Translates to: KRLLQKHRTVPKHLLLPFSAWGS*NIQTFL
Trigger: GAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGA...GAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR GCA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCTCACCTCTGCATGGCTaGTTTTGGAGTGCTATGGAG +
Preference number: 4 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSSPLHG*FWSAME
Trigger: CTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGA...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR GCA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTTATTCCAGGTGGAGTTaGCCAGGTTCAAACGCCTCT +
Preference number: 4 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPYSRWS*PGSNAS
Trigger: AGAGGCGTTTGAACCTGGGCAACTCCACCTGGAATA...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CCA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCACAGGGCAGGGCTGCTaGTTGCCCATTTTTATGGTT +
Preference number: 4 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSTGQGC*LPIFMV
Trigger: AACCATAAAAATGGGCAACCAGCAGCCCTGCCCTGT...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CCA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGTTGTCACCTCTGCATaGCTGCTTTTGGAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPVVTSA*LLLECY
Trigger: ATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAAC...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp ACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCAGCATGGGGCAGCTaGAACATTCAAACATTTCTC +
Preference number: 4 (lower is better)
Translates to: TMGSSLLTTSPAVPSVTKSAWGS*NIQTFL
Trigger: GAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGA...CTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CCA 90 bp CTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCATCTTGGTATTGGTaGGTTTTGGCCGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LTTYYLSSSTICNKVLSQPSWYW*VLAGFF
Trigger: AAAGAAGCCGGCCAAAACCCACCAATACCAAGATGG...CTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS GCA 90 bp CCGCCTTGGCGCAGTAGGGCCCCGAGGCAACGCAGGCCGCGCGGGTaGCGGGCTCCGGCCGCCAAGTGCACAGCCGCTGCGCCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: PPWRSRAPRQRRPRG*RAPAAKCTAAAPSS
Trigger: AGAGGACGGCGCAGCGGCTGTGCACTTGGCGGCCGGAGCCCGGCACCCGCGCGGCCTGCGTTGCCTCGGGGCCCTACTGCGCCAAGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596099.1
ENST00000596626.1
ENST00000596834.1
ENST00000598347.2
ENST00000601401.5
ENST00000651416.1
ENST00000652132.1
CDS GCA 90 bp CCGAGGCAACGCAGGCCGCGCGGGTGCCGGGCTCCGGCCGCCAAGTaGACAGCCGCTGCGCCGTCCTCTAGCACCAAATTAGGGTCCGCG +
Preference number: 5 (lower is better)
Translates to: PRQRRPRGCRAPAAK*TAAAPSSSTKLGSA
Trigger: CGCGGACCCTAATTTGGTGCTAGAGGACGGCGCAGCGGCTGTGCACTTGGCGGCCGGAGCCCGGCACCCGCGCGGCCTGCGTTGCCTCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000596834.1
ENST00000598347.2
ENST00000601401.5
ENST00000651416.1
ENST00000652132.1
CDS GCA 90 bp CGCGTGTCGAGATCCTGCAGGACTCGCGCGCACTCCAGGTGTCCCTaGTGCAGGGCCAGGTCCAGCGGCCGGAGTCCGTCCTGGTCGCGC +
Preference number: 5 (lower is better)
Translates to: RVSRSCRTRAHSRCP*CRARSSGRSPSWSR
Trigger: GCGCGACCAGGACGGACTCCGGCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGAGTGCGCGCGAGTCCTGCAGGATCTCGACACGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596099.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 90 bp GTGTCGAGATCCTGCAGGACTCGCGCGCACTCCAGGTGTCCCTGCTaGAGGGCCAGGTCCAGCGGCCGGAGTCCGTCCTGGTCGCGCAGC +
Preference number: 5 (lower is better)
Translates to: VSRSCRTRAHSRCPC*RARSSGRSPSWSRS
Trigger: GCTGCGCGACCAGGACGGACTCCGGCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGAGTGCGCGCGAGTCCTGCAGGATCTCGACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596099.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 90 bp TCTGCCCCGATCCGGGTCCGGGTCCTGGTCCGCGTGTCGAGATCCTaGAGGACTCGCGCGCACTCCAGGTGTCCCTGCTGCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SAPIRVRVLVRVSRS*RTRAHSRCPCCRAR
Trigger: CCTGGCCCTGCAGCAGGGACACCTGGAGTGCGCGCGAGTCCTGCAGGATCTCGACACGCGGACCAGGACCCGGACCCGGATCGGGGCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596099.1
ENST00000596626.1
ENST00000596834.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 90 bp CGCTCGCCTTCAGCCAGGAAGACAAGGAGGGCACGGTGCAGCAGGTaGACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACC +
Preference number: 5 (lower is better)
Translates to: RSPSARKTRRARCSR*TPKRRRRAGGQPAT
Trigger: GGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACCTGCTGCACCGTGCCCTCCTTGTCTTCCTGGCTGAAGGCGAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 90 bp GTGTCGAGATCCTGCAGGACTCGCGCGCACTCCAGGTGTCCCTGCTaGAGGGCCAGGTCCAGCGGCCGGAGTCCGTCCTACAGGGGCGCG +
Preference number: 5 (lower is better)
Translates to: VSRSCRTRAHSRCPC*RARSSGRSPSYRGA
Trigger: CGCGCCCCTGTAGGACGGACTCCGGCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGAGTGCGCGCGAGTCCTGCAGGATCTCGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596626.1
ENST00000596834.1
CDS GCA 90 bp CGCGTGTCGAGATCCTGCAGGACTCGCGCGCACTCCAGGTGTCCCTaGTGCAGGGCCAGGTCCAGCGGCCGGAGTCCGTCCTACAGGGGC +
Preference number: 5 (lower is better)
Translates to: RVSRSCRTRAHSRCP*CRARSSGRSPSYRG
Trigger: GCCCCTGTAGGACGGACTCCGGCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGAGTGCGCGCGAGTCCTGCAGGATCTCGACACGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596626.1
ENST00000596834.1
CDS-3UTR CAA 90 bp CCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAGCAGTGCGCCGGGTCCGCTCCTaGGCTCAGCAGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PQAPATSRWPACHHSIAVRRVRS*AQQQLQ
Trigger: CTGGAGCTGCTGCTGAGCCAAGGAGCGGACCCGGCG...CACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS CCA 90 bp CAGGCTCGGGCTCCTGAGTCTCTGCCCCGATCCGGGTCCGGGTCCTaGTCCGCGTGTCGAGATCCTGCAGGACTCGCGCGCACTCCAGGT +
Preference number: 5 (lower is better)
Translates to: QARAPESLPRSGSGS*SACRDPAGLARTPG
Trigger: ACCTGGAGTGCGCGCGAGTCCTGCAGGATCTCGACACGCGGACCAGGACCCGGACCCGGATCGGGGCAGAGACTCAGGAGCCCGAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596099.1
ENST00000596626.1
ENST00000596834.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp CTGGGCTCACCCAGCCTTTCTTTGCCCGCGCAGTGCCTCCCAACCTaGTCGCGCAGCGCCGGGTCCGCTCCTTGGCTCAGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LGSPSLSLPAQCLPT*SRSAGSAPWLSSSS
Trigger: GGAGCTGCTGCTGAGCCAAGGAGCGGACCCGGCGCTGCGCGACCAGGTTGGGAGGCACTGCGCGGGCAAAGAAAGGCTGGGTGAGCCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596626.1
ENST00000596834.1
CDS GCA 90 bp AGAAGTCAAGCCCCAGCAGCCCTGCAGGCCCTACTCACTGCCAGGTaGAGGCTCGGGCTCCTGAGTCTCTGCCCCGATCCGGGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: RSQAPAALQALLTAR*RLGLLSLCPDPGPG
Trigger: ACCCGGACCCGGATCGGGGCAGAGACTCAGGAGCCCGAGCCTGCACCTGGCAGTGAGTAGGGCCTGCAGGGCTGCTGGGGCTTGACTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596099.1
ENST00000596834.1
CDS GCA 90 bp CTGGTCCAGAAGTCAAGCCCCAGCAGCCCTGCAGGCCCTACTCACTaGCAGGTGCAGGCTCGGGCTCCTGAGTCTCTGCCCCGATCCGGG +
Preference number: 5 (lower is better)
Translates to: LVQKSSPSSPAGPTH*QVQARAPESLPRSG
Trigger: CCCGGATCGGGGCAGAGACTCAGGAGCCCGAGCCTGCACCTGGCAGTGAGTAGGGCCTGCAGGGCTGCTGGGGCTTGACTTCTGGACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596099.1
ENST00000596834.1
CDS CCA 90 bp GCATCCCGCAACCTGCGAGCCAGGCGGGCCTCCGAGCACATGCCCTaGCTGGGTCCGAAGCGCACCGCCTGGTCGGTCGATTTCCTACTT +
Preference number: 5 (lower is better)
Translates to: ASRNLRARRASEHMP*LGPKRTAWSVDFLL
Trigger: AAGTAGGAAATCGACCGACCAGGCGGTGCGCTTCGGACCCAGCCAGGGCATGTGCTCGGAGGCCCGCCTGGCTCGCAGGTTGCGGGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404261.9
ENST00000594072.6
ENST00000601401.5
ENST00000651416.1
CDS-3UTR CAA 90 bp AGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACACACACCGCCGGGTCCGCTCCTaGGCTCAGCAGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: SPLSAWGRSAWVLPTHTHRRVRS*AQQQLQ
Trigger: CTGGAGCTGCTGCTGAGCCAAGGAGCGGACCCGGCG...GTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CAA 90 bp GGTGCACCCCCAAGCGCCGGCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAAGCCAATGTCCCTGTaGTCACCTCTGCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: GAPPSAGDEQVASLPPLHKPMSL*SPLHGC
Trigger: GCAGCCATGCAGAGGTGACAACAGGGACATTGGCTT...ATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS TCA 90 bp GGGTCCACATCGGGGTTCGAGAGCTTTAGTGTCCTCAGGGGCCCTTaGCACCCGGAGGCGCTCAAGCAGGGTCTGGGACCGCCGATAAGA +
Preference number: 5 (lower is better)
Translates to: GSTSGFESFSVLRGP*HPEALKQGLGPPIR
Trigger: TCTTATCGGCGGTCCCAGACCCTGCTTGAGCGCCTCCGGGTGTCAAGGGCCCCTGAGGACACTAAAGCTCTCGAACCCCGATGTGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404261.9
ENST00000601401.5
CDS GCA 90 bp GGCAGGATCTGGCTGCTCAAACTGCTGGGCCAGCGCGTCTTCATCTaGCTGGACATCTGGAATACAGCCCGTCCGCAGGGCTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GRIWLLKLLGQRVFI*LDIWNTARPQGCSQ
Trigger: CTGGCTGCAGCCCTGCGGACGGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp ACCCCCTCCCGCCACCTCCTGGCAGGATCTGGCTGCTCAAACTGCTaGGCCAGCGCGTCTTCATCTGCCTGGACATCTGGAATACAGCCC +
Preference number: 5 (lower is better)
Translates to: TPSRHLLAGSGCSNC*ASASSSAWTSGIQP
Trigger: GGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGGTGGCGGGAGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp GAAGCTAGACTTCACGACCCCCTCCCGCCACCTCCTGGCAGGATCTaGCTGCTCAAACTGCTGGGCCAGCGCGTCTTCATCTGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: EARLHDPLPPPPGRI*LLKLLGQRVFICLD
Trigger: GTCCAGGCAGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGGTGGCGGGAGGGGGTCGTGAAGTCTAGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp GGCCAAGTGCTCGGAGTCCCTTCAGCAACTCCAAGTCAGACACAGTaGAGACTGGCAGGTGCCGGCAAGGGCCGACAGGTTCCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: GQVLGVPSATPSQTQ*RLAGAGKGRQVPCH
Trigger: GTGGCAGGGAACCTGTCGGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGGAGTTGCTGAAGGGACTCCGAGCACTTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594072.6
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS TCA 90 bp GAGTGTCCGAGGCTGGGTCCTCAGCTCCAGAGACCTCAACCGCTGTaGCGAAAGAGGCGTCTGAGCTGTAATCCCAGTGCCCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: ECPRLGPQLQRPQPL*RKRRLSCNPSALEG
Trigger: CCCCTCCAGGGCACTGGGATTACAGCTCAGACGCCTCTTTCGTCACAGCGGTTGAGGTCTCTGGAGCTGAGGACCCAGCCTCGGACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS TCA 90 bp GAAGATGGCACGGATGAAAGTCTGAAGGCGCTCAGCTGGGGTCAGTaGGAAGGCTCGGGCTGGCAGGTCCTGAGTCTCCCTGGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: EDGTDESLKALSWGQ*EGSGWQVLSLPGVQ
Trigger: CTGGACCCCAGGGAGACTCAGGACCTGCCAGCCCGAGCCTTCTCACTGACCCCAGCTGAGCGCCTTCAGACTTTCATCCGTGCCATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS TCA 90 bp ATGGCCGGGCCCTCGTCCCTTTGCCCACGTAGAAGATGGCACGGATaGAAGTCTGAAGGCGCTCAGCTGGGGTCAGTGAGAAGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: MAGPSSLCPRRRWHG*KSEGAQLGSVRRLG
Trigger: CCCGAGCCTTCTCACTGACCCCAGCTGAGCGCCTTCAGACTTTCATCCGTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCCGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 90 bp ACGACCCCCTCCCGCCACCTCCTGGCAGGATCTGGCTGCTCAAACTaGTGGGCCAGCGCGTCTTCATCTGCCTGGACATCTGGAATACAG +
Preference number: 5 (lower is better)
Translates to: TTPSRHLLAGSGCSN*WASASSSAWTSGIQ
Trigger: CTGTATTCCAGATGTCCAGGCAGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGGTGGCGGGAGGGGGTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 90 bp CTAGACTTCACGACCCCCTCCCGCCACCTCCTGGCAGGATCTGGCTaGTCAAACTGCTGGGCCAGCGCGTCTTCATCTGCCTGGACATCT +
Preference number: 5 (lower is better)
Translates to: LDFTTPSRHLLAGSG*SNCWASASSSAWTS
Trigger: AGATGTCCAGGCAGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGGTGGCGGGAGGGGGTCGTGAAGTCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp CACCAAGTGCTCGGAGTCCCTTCAGCAACTCCAAGTCAGACACAGTaGAGACTGGCAGGTGCCGGCAAGGGCCGACAGGTTCCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: HQVLGVPSATPSQTQ*RLAGAGKGRQVPCH
Trigger: GTGGCAGGGAACCTGTCGGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGGAGTTGCTGAAGGGACTCCGAGCACTTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000596626.1
CDS CCA 90 bp TCCCAAGTGCTCGGAGTCCCTTCAGCAACTCCAAGTCAGACACAGTaGAGACTGGCAGGTGCCGGCAAGGGCCGACAGGTTCCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: SQVLGVPSATPSQTQ*RLAGAGKGRQVPCH
Trigger: GTGGCAGGGAACCTGTCGGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGGAGTTGCTGAAGGGACTCCGAGCACTTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CAA 90 bp CACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCATCGCCGGGTCCGCTCCTaGGCTCAGCAGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: HTHTHTPSETRDGGCCQHRRVRS*AQQQLQ
Trigger: CTGGAGCTGCTGCTGAGCCAAGGAGCGGACCCGGCG...ATGCTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS GCA 90 bp AGTCCCTTCAGCAACTCCAAGTCAGACACAGTGGAGACTGGCAGGTaGCGGCAAGGGCCGACAGGTTCCCTGCCACCTGTAGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: SPFSNSKSDTVETGR*RQGPTGSLPPVELA
Trigger: GGCAAGCTCTACAGGTGGCAGGGAACCTGTCGGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGGAGTTGCTGAAGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp GAGAGGCATGGAGGAAGGGGAGGACTGGAAGCCAGCAGCATTTGGTaGGGTCAGAGTCAGGGCCTGCAGACGGGCATTCAGTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: ERHGGRGGLEASSIW*GQSQGLQTGIQFCL
Trigger: GAGGCAGAACTGAATGCCCGTCTGCAGGCCCTGACTCTGACCCCACCAAATGCTGCTGGCTTCCAGTCCTCCCCTTCCTCCATGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp TGCTCGGAGTCCCTTCAGCAACTCCAAGTCAGACACAGTGGAGACTaGCAGGTGCCGGCAAGGGCCGACAGGTTCCCTGCCACCTGTAGA +
Preference number: 5 (lower is better)
Translates to: CSESLQQLQVRHSGD*QVPARADRFPATCR
Trigger: TCTACAGGTGGCAGGGAACCTGTCGGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGGAGTTGCTGAAGGGACTCCGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp GGATCTGGCTGCTCAAACTGCTGGGCCAGCGCGTCTTCATCTGCCTaGACATCTGGAATACAGCCCGTCCGCAGGGCTGCAGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: GSGCSNCWASASSSA*TSGIQPVRRAAASS
Trigger: AGAACTGGCTGCAGCCCTGCGGACGGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS-3UTR CAA 90 bp AAGCCTCCACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACTGTCCTCAGGGGCCCTaGACACCCGGAGGCGCTCAA +
Preference number: 5 (lower is better)
Translates to: KPPQRPRAGSNVGTQHRNCPQGP*TPGGAQ
Trigger: TTGAGCGCCTCCGGGTGTCAAGGGCCCCTGAGGACA...GTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CAA 90 bp TCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACGCCGGGTCCGCTCCTaGGCTCAGCAGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: SCPPPTMGSSLLTTSPAVRRVRS*AQQQLQ
Trigger: CTGGAGCTGCTGCTGAGCCAAGGAGCGGACCCGGCG...TACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp GGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACGCCGGGTCCGCTCCTaGGCTCAGCAGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GVAQVQTPLTEAPDCSKARRVRS*AQQQLQ
Trigger: CTGGAGCTGCTGCTGAGCCAAGGAGCGGACCCGGCG...TGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS GCA 90 bp ATTTGGTGGGGTCAGAGTCAGGGCCTGCAGACGGGCATTCAGTTCTaGCTCCGTGCCCTGAGACCTAGGTACCCTCTGGTTGGCATGGAC +
Preference number: 5 (lower is better)
Translates to: IWWGQSQGLQTGIQF*LRALRPRYPLVGMD
Trigger: GTCCATGCCAACCAGAGGGTACCTAGGTCTCAGGGCACGGAGGCAGAACTGAATGCCCGTCTGCAGGCCCTGACTCTGACCCCACCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 90 bp CAGGTGCCGGCAAGGGCCGACAGGTTCCCTGCCACCTGTAGAGCTTaGCTCATCCTCTGTCAGCCAGAGCGTGGCCATGTCACTATCAAT +
Preference number: 5 (lower is better)
Translates to: QVPARADRFPATCRA*LILCQPERGHVTIN
Trigger: ATTGATAGTGACATGGCCACGCTCTGGCTGACAGAGGATGAGGCAAGCTCTACAGGTGGCAGGGAACCTGTCGGCCCTTGCCGGCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS-3UTR CAA 90 bp GCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCAACTCTGTCCTCAGGGGCCCTaGACACCCGGAGGCGCTCAA +
Preference number: 5 (lower is better)
Translates to: AWGSWNIQTFLPRLDGQLCPQGP*TPGGAQ
Trigger: TTGAGCGCCTCCGGGTGTCAAGGGCCCCTGAGGACA...GAGTTGGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000594072.6
CDS-3UTR CAA 90 bp AAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTCGACAGATCGAGCGTaGGGGTCCCCGCCTTGGCGC +
Preference number: 5 (lower is better)
Translates to: KRLLQKHRTVPKHLLLPFSTDRA*GSPPWR
Trigger: GCGCCAAGGCGGGGACCCCAACGCTCGATCTGTCGA...GAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CAA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGCGCCGGGTCCGCTCCTaGGCTCAGCAGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGRRVRS*AQQQLQ
Trigger: CTGGAGCTGCTGCTGAGCCAAGGAGCGGACCCGGCG...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp ATATGGCCGGGCCCTCGTCCCTTTGCCCACGTAGAAGATGGCACGGATGAAAGTGGAAGCCAGCAGCATTaGGTGGGGTCAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: IWPGPRPFAHVEDGTDESGSQQH*VGSESG
Trigger: CCCTGACTCTGACCCCACCAAATGCTGCTGGCTTCC...ACTTTCATCCGTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCCGGCCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS TCA 90 bp AGAGTCAGGGCCTGCAGACGGGCATTCAGTTCTGCCTCCGTGCCCTaGGACCTAGGTACCCTCTGGTTGGCATGGACAACATGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: RVRACRRAFSSASVP*DLGTLWLAWTTCRS
Trigger: ACTTCTGCATGTTGTCCATGCCAACCAGAGGGTACCTAGGTCTCAGGGCACGGAGGCAGAACTGAATGCCCGTCTGCAGGCCCTGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS-3UTR CAA 90 bp CAAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTAGGAAGCCAGCAGCATTaGGTGGGGTCAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: QSTFCFPSCPPPTMGSSLGSQQH*VGSESG
Trigger: CCCTGACTCTGACCCCACCAAATGCTGCTGGCTTCC...TAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp CTTCCACAATACACGCCTCCCGTGTATAAGCCTCCACAGCGACCACGTGCTGGAGGTGGGGCTGTTTTCTaGACCGCCCATGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: LPQYTPPVYKPPQRPRAGGGAVF*TAHGDQ
Trigger: TTGGTCACCATGGGCGGTCAAGAAAACAGCCCCACC...TCCAGCACGTGGTCGCTGTGGAGGCTTATACACGGGAGGCGTGTATTGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CAA 90 bp ACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTGCCCTTGCTTCTGGTaGGTGAGCGTCTGGATCCCT +
Preference number: 5 (lower is better)
Translates to: TTCWKQCRDTTPQPLAQMCPCFW*VSVWIP
Trigger: AGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCA...CATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CAA 90 bp CCGGGCCCTCGTCCCTTTGCCCACGTAGAAGATGGCACGGATGAAAGTCTGAAGTCCATAGCAGTGCCCTaGCTTCTGGTTGGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: PGPRPFAHVEDGTDESLKSIAVP*LLVGER
Trigger: ACGCTCACCAACCAGAAGCAAGGGCACTGCTATGGA...CTTCAGACTTTCATCCGTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS TCA 90 bp TCCAGCTGCTGGTGGTACAACTGCCTGGTGAAGGGTGTGATGGGGTaGGGATTCTCACCAAGTGCTCGGAGTCCCTTCAGCAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: SSCWWYNCLVKGVMG*GFSPSARSPFSNSK
Trigger: CTTGGAGTTGCTGAAGGGACTCCGAGCACTTGGTGAGAATCCTCACCCCATCACACCCTTCACCAGGCAGTTGTACCACCAGCAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000596626.1
CDS GCA 90 bp CAAGCCAATGTCCCTGTTGTCACCTCTGCATGGCTGCTTTTGGAGTaGTATGGAGTCCAGCGTCTCATCGGTAGGTCCAGAGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QANVPVVTSAWLLLE*YGVQRLIGRSREAW
Trigger: CCAGGCCTCTCTGGACCTACCGATGAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAACAGGGACATTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 90 bp GGGTCAGCCTCCAAGCCAATGTCCCTGTTGTCACCTCTGCATGGCTaGTTTTGGAGTGCTATGGAGTCCAGCGTCTCATCGGTAGGTCCA +
Preference number: 5 (lower is better)
Translates to: GSASKPMSLLSPLHG*FWSAMESSVSSVGP
Trigger: TGGACCTACCGATGAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAACAGGGACATTGGCTTGGAGGCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp GCCTCCAAGCCAATGTCCCTGTTGTCACCTCTGCATGGCTGCTTTTaGAGTGCTATGGAGTCCAGCGTCTCATCGGTAGGTCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: ASKPMSLLSPLHGCF*SAMESSVSSVGPER
Trigger: CCTCTCTGGACCTACCGATGAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAACAGGGACATTGGCTTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp TCCTGGGTCAGCCTCCAAGCCAATGTCCCTGTTGTCACCTCTGCATaGCTGCTTTTGGAGTGCTATGGAGTCCAGCGTCTCATCGGTAGG +
Preference number: 5 (lower is better)
Translates to: SWVSLQANVPVVTSA*LLLECYGVQRLIGR
Trigger: CCTACCGATGAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAACAGGGACATTGGCTTGGAGGCTGACCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp TTGCCTCATCCTCTGTCAGCCAGAGCGTGGCCATGTCACTATCAATaGATGTCTGGTGCTCCCACAGGCAGTGGCAGTCAGAAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LPHPLSARAWPCHYQ*MSGAPTGSGSQKLQ
Trigger: CTGGAGCTTCTGACTGCCACTGCCTGTGGGAGCACCAGACATCCATTGATAGTGACATGGCCACGCTCTGGCTGACAGAGGATGAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 90 bp GAGCTGGCCACAAATAGTGGATGTGAGACGGTCAGAACCAATGGGTaGGGTGGGGAAGACCCTGGATGTCAGGGACTGGTCCAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: ELATNSGCETVRTNG*GGEDPGCQGLVQKS
Trigger: TGACTTCTGGACCAGTCCCTGACATCCAGGGTCTTCCCCACCCCACCCATTGGTTCTGACCGTCTCACATCCACTATTTGTGGCCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596099.1
CDS-3UTR CAA 90 bp CTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGTCGACAGATCGAGCGTaGGGGTCCCCGCCTTGGCGC +
Preference number: 5 (lower is better)
Translates to: LLTTSPAVPSVTKSSLSLSTDRA*GSPPWR
Trigger: GCGCCAAGGCGGGGACCCCAACGCTCGATCTGTCGA...CAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp AAGCCTCCACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACGCCGAGCTCCCATGTTaGTCCACAGTTTCAAGGGGA +
Preference number: 5 (lower is better)
Translates to: KPPQRPRAGSNVGTQHRNAELPC*STVSRG
Trigger: TCCCCTTGAAACTGTGGACAAACATGGGAGCTCGGC...GTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CAA 90 bp ACAGCGACCACGTGCTGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCTAGGTACCCTCTGGTaGGCATGGACAACATGCAGA +
Preference number: 5 (lower is better)
Translates to: TATTCWKQCRDTTPQPLALGTLW*AWTTCR
Trigger: TCTGCATGTTGTCCATGCCAACCAGAGGGTACCTAG...GGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CAA 90 bp GGAGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACAGGAAGCCAGCAGCATTaGGTGGGGTCAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: GDLPGCSLHTHTHTQTHTGSQQH*VGSESG
Trigger: CCCTGACTCTGACCCCACCAAATGCTGCTGGCTTCC...TGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CAA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTGGAAGCCAGCAGCATTaGGTGGGGTCAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSGSQQH*VGSESG
Trigger: CCCTGACTCTGACCCCACCAAATGCTGCTGGCTTCC...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp CACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCATGGTGGGGCTGTTTTCTaGACCGCCCATGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: HTHTHTPSETRDGGCCQHGGAVF*TAHGDQ
Trigger: TTGGTCACCATGGGCGGTCAAGAAAACAGCCCCACC...ATGCTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CAA 90 bp CAAAGCACCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTAGGTGGGGCTGTTTTCTaGACCGCCCATGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: QSTFCFPSCPPPTMGSSLGGAVF*TAHGDQ
Trigger: TTGGTCACCATGGGCGGTCAAGAAAACAGCCCCACC...TAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CAA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACTGCCCTTGCTTCTGGTaGGTGAGCGTCTGGATCCCT +
Preference number: 5 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYCPCFW*VSVWIP
Trigger: AGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCA...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp CTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCTTCTGCTTCCCTTCTaGTCCTCCTCCCACGATGGG +
Preference number: 5 (lower is better)
Translates to: LSAWGSWNIQTFLPRLDGLLLPF*SSSHDG
Trigger: CCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAG...GCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CAA 90 bp GTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTTCTGCTTCCCTTCTaGTCCTCCTCCCACGATGGG +
Preference number: 5 (lower is better)
Translates to: VLLPRWGAHYLLPLQQYHLLLPF*SSSHDG
Trigger: CCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAG...ATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp GGGCTGCTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGTCGCCATCTTGGTATaGGTGGGTTTTGGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: GLLSAWGSWNIQTFLPRLVAILV*VGFGRL
Trigger: AAGCCGGCCAAAACCCACCAATACCAAGATGGCGAC...CAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS GCA 90 bp CAACTGCCTGGTGAAGGGTGTGATGGGGTGAGGATTCTCACCAAGTaGTCGGAGTCCCTTCAGCAACTCCAAGTCAGACACAGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: QLPGEGCDGVRILTK*SESLQQLQVRHSGD
Trigger: GTCTCCACTGTGTCTGACTTGGAGTTGCTGAAGGGACTCCGAGCACTTGGTGAGAATCCTCACCCCATCACACCCTTCACCAGGCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000596626.1
CDS-3UTR CAA 90 bp CACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCATAAGCCAATGTCCCTGTaGTCACCTCTGCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: HTHTHTPSETRDGGCCQHKPMSL*SPLHGC
Trigger: GCAGCCATGCAGAGGTGACAACAGGGACATTGGCTT...ATGCTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CAA 90 bp CTGTCAGCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCAAGCCAATGTCCCTGTaGTCACCTCTGCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: LSAWGSWNIQTFLPRLDGKPMSL*SPLHGC
Trigger: GCAGCCATGCAGAGGTGACAACAGGGACATTGGCTT...GCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CAA 90 bp CCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGCCGAGCTCCCATGTTaGTCCACAGTTTCAAGGGGA +
Preference number: 5 (lower is better)
Translates to: PPPTMGSSLLTTSPAVPSAELPC*STVSRG
Trigger: TCCCCTTGAAACTGTGGACAAACATGGGAGCTCGGC...AGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp GTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATGCCGAGCTCCCATGTTaGTCCACAGTTTCAAGGGGA +
Preference number: 5 (lower is better)
Translates to: VLLPRWGAHYLLPLQQYHAELPC*STVSRG
Trigger: TCCCCTTGAAACTGTGGACAAACATGGGAGCTCGGC...ATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp TTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCGCCGAGCTCCCATGTTaGTCCACAGTTTCAAGGGGA +
Preference number: 5 (lower is better)
Translates to: LSSSHDGELTTYYLSSSTAELPC*STVSRG
Trigger: TCCCCTTGAAACTGTGGACAAACATGGGAGCTCGGC...GGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp GTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTACACACTAGGTACCCTCTGGTaGGCATGGACAACATGCAGA +
Preference number: 5 (lower is better)
Translates to: VTKSSLSLGEICLGAPYTLGTLW*AWTTCR
Trigger: TCTGCATGTTGTCCATGCCAACCAGAGGGTACCTAG...TGTGTAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CAA 90 bp CAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTGGAAGCCAGCAGCATTaGGTGGGGTCAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: QTPLTEAPDCSKAPSASLGSQQH*VGSESG
Trigger: CCCTGACTCTGACCCCACCAAATGCTGCTGGCTTCC...AAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CAA 90 bp AAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCGGAAGCCAGCAGCATTaGGTGGGGTCAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: KRLLQKHRTVPKHLLLPFGSQQH*VGSESG
Trigger: CCCTGACTCTGACCCCACCAAATGCTGCTGGCTTCC...GAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CAA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGTGCCCTTGCTTCTGGTaGGTGAGCGTCTGGATCCCT +
Preference number: 5 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGECPCFW*VSVWIP
Trigger: AGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCA...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp ATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGATCTGCCTGGGTGCTCCCTATCCATAGCAGTGCCCTaGCTTCTGGTTGGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: ICNKVLSQPGGDLPGCSLSIAVP*LLVGER
Trigger: ACGCTCACCAACCAGAAGCAAGGGCACTGCTATGGA...TAGGGAGCACCCAGGCAGATCTCCCCCAGGCTGAGAGAGGACTTTGTTACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CAA 90 bp AGGTGGAGTTGCCCAGGTTCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAACTTCTGCTTCCCTTCTaGTCCTCCTCCCACGATGGG +
Preference number: 5 (lower is better)
Translates to: RWSCPGSNASYRSTGLFQLLLPF*SSSHDG
Trigger: CCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAG...TTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGGGCAACTCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CAA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCACTTCTGCTTCCCTTCTaGTCCTCCTCCCACGATGGG +
Preference number: 5 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPLLLPF*SSSHDG
Trigger: CCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAG...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp GTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATGTCGCCATCTTGGTATaGGTGGGTTTTGGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: VLLPRWGAHYLLPLQQYHVAILV*VGFGRL
Trigger: AAGCCGGCCAAAACCCACCAATACCAAGATGGCGAC...ATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CAA 90 bp CGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTTGGGTGATCTGCCCTCCTaGGCCTCCCAAAATGCTAGG +
Preference number: 5 (lower is better)
Translates to: RLLQKHRTVPKHLLLPFLGDLPS*ASQNAR
Trigger: CCTAGCATTTTGGGAGGCCAAGGAGGGCAGATCACC...CAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CAA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCTGTCCTCAGGGGCCCTaGACACCCGGAGGCGCTCAA +
Preference number: 5 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSCPQGP*TPGGAQ
Trigger: TTGAGCGCCTCCGGGTGTCAAGGGCCCCTGAGGACA...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000594072.6
CDS-3UTR CAA 90 bp TTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCTCTGCATGGCTGCTTTaGGAGTGCTATGGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: LSSSHDGELTTYYLSSSTSAWLL*ECYGVQ
Trigger: CTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGA...GGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp CCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAAAGCCAATGTCCCTGTaGTCACCTCTGCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: PPTMGSSLLTTSPAVPSVKPMSL*SPLHGC
Trigger: GCAGCCATGCAGAGGTGACAACAGGGACATTGGCTT...TACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp TTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTGCCGAGCTCCCATGTTaGTCCACAGTTTCAAGGGGA +
Preference number: 5 (lower is better)
Translates to: FLSSSHDGELTTYYLSSSAELPC*STVSRG
Trigger: TCCCCTTGAAACTGTGGACAAACATGGGAGCTCGGC...ACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp TCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCTAGGTACCCTCTGGTaGGCATGGACAACATGCAGA +
Preference number: 5 (lower is better)
Translates to: SLLVLLPRWGAHYLLPLQLGTLW*AWTTCR
Trigger: TCTGCATGTTGTCCATGCCAACCAGAGGGTACCTAG...CTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp CACACACACACACACACCCCTTCTGAAACCAGAGATGGGGGCTGCTGTCAGCATCTAGGTACCCTCTGGTaGGCATGGACAACATGCAGA +
Preference number: 5 (lower is better)
Translates to: HTHTHTPSETRDGGCCQHLGTLW*AWTTCR
Trigger: TCTGCATGTTGTCCATGCCAACCAGAGGGTACCTAG...ATGCTGACAGCAGCCCCCATCTCTGGTTTCAGAAGGGGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CAA 90 bp AGCCCAGTAGGTTTCAGCCTCATTTTACCCAGCTCCTATTCCAGGTGGAGTTGCGGTGGGGCTGTTTTCTaGACCGCCCATGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: SPVGFSLILPSSYSRWSCGGAVF*TAHGDQ
Trigger: TTGGTCACCATGGGCGGTCAAGAAAACAGCCCCACC...GCAACTCCACCTGGAATAGGAGCTGGGTAAAATGAGGCTGAAACCTACTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CAA 90 bp TCAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTGGTGGGGCTGTTTTCTaGACCGCCCATGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: SNASYRSTGLFQSTFCFPGGAVF*TAHGDQ
Trigger: TTGGTCACCATGGGCGGTCAAGAAAACAGCCCCACC...AGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CAA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCATCCATAGCAGTGCCCTaGCTTCTGGTTGGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPSIAVP*LLVGER
Trigger: ACGCTCACCAACCAGAAGCAAGGGCACTGCTATGGA...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp ACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGGGAGTCCATAGCAGTGCCCTaGCTTCTGGTTGGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: TTSPAVPSVTKSSLSLGESIAVP*LLVGER
Trigger: ACGCTCACCAACCAGAAGCAAGGGCACTGCTATGGA...CTCCCCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp AGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACACAGGTGATCTGCCCTCCTaGGCCTCCCAAAATGCTAGG +
Preference number: 5 (lower is better)
Translates to: RSAWVLPTHTHTHTNTHTGDLPS*ASQNAR
Trigger: CCTAGCATTTTGGGAGGCCAAGGAGGGCAGATCACC...TGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CAA 90 bp CTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACTGGATCCCTGTTTTCTaGACCGCCCATGGTGACCAA +
Preference number: 5 (lower is better)
Translates to: LVLLPRWGAHYLLPLQQYWIPVF*TAHGDQ
Trigger: TTGGTCACCATGGGCGGTCAAGAAAACAGGGATCCA...GTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598347.2
CDS-3UTR CAA 90 bp TGGAAGCAATGTAGGGACACAACACCGCAACCACTGGCCCAGATGTCCAAGATCTCTGCATGGCTGCTTTaGGAGTGCTATGGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: WKQCRDTTPQPLAQMSKISAWLL*ECYGVQ
Trigger: CTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGA...GATCTTGGACATCTGGGCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404261.9
CDS-3UTR CAA 90 bp CCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTATCTGCATGGCTGCTTTaGGAGTGCTATGGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: PPTMGSSLLTTSPAVPSVSAWLL*ECYGVQ
Trigger: CTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGA...TACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp TTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCACTAGGTACCCTCTGGTaGGCATGGACAACATGCAGA +
Preference number: 5 (lower is better)
Translates to: FPSCPPPTMGSSLLTTSPLGTLW*AWTTCR
Trigger: TCTGCATGTTGTCCATGCCAACCAGAGGGTACCTAG...TGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp AGATCTGCCTGGGTGCTCCCTACACACACACACACACACACAAACACACACACATCCATAGCAGTGCCCTaGCTTCTGGTTGGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: RSAWVLPTHTHTHTNTHTSIAVP*LLVGER
Trigger: ACGCTCACCAACCAGAAGCAAGGGCACTGCTATGGA...TGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTAGGGAGCACCCAGGCAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000652132.1
CDS-3UTR CAA 90 bp GCATGGGGCAGCTGGAACATTCAAACATTTCTCCCCAGGCTGGATGGCCAACTCTGGTATTGGTGGGTTTaGGCCGGCTTCTTTACTGCA +
Preference number: 5 (lower is better)
Translates to: AWGSWNIQTFLPRLDGQLWYWWV*AGFFTA
Trigger: TGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCA...GAGTTGGCCATCCAGCCTGGGGAGAAATGTTTGAATGTTCCAGCTGCCCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CAA 90 bp TCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACTCTGCATGGCTGCTTTaGGAGTGCTATGGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: SHDGELTTYYLSSSTICNSAWLL*ECYGVQ
Trigger: CTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGA...GTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp CAAACGCCTCTTACAGAAGCACCGGACTGTTCCAAAGCACCTTCTGCTTCCCTTCTAGGTACCCTCTGGTaGGCATGGACAACATGCAGA +
Preference number: 5 (lower is better)
Translates to: QTPLTEAPDCSKAPSASLLGTLW*AWTTCR
Trigger: TCTGCATGTTGTCCATGCCAACCAGAGGGTACCTAG...AAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000598347.2
CDS-3UTR CAA 90 bp CACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAATGCCCTTGCTTCTGGTaGGTGAGCGTCTGGATCCCT +
Preference number: 5 (lower is better)
Translates to: HDGELTTYYLSSSTICNKCPCFW*VSVWIP
Trigger: AGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCA...TTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp ACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTGGGTCCATAGCAGTGCCCTaGCTTCTGGTTGGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: TYYLSSSTICNKVLSQPGSIAVP*LLVGER
Trigger: ACGCTCACCAACCAGAAGCAAGGGCACTGCTATGGA...CCCAGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp TCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTACCTCTCCAGCAGTATGGTATTGGTGGGTTTaGGCCGGCTTCTTTACTGCA +
Preference number: 5 (lower is better)
Translates to: SCPPPTMGSSLLTTSPAVWYWWV*AGFFTA
Trigger: TGCAGTAAAGAAGCCGGCCAAAACCCACCAATACCA...TACTGCTGGAGAGGTAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CAA 90 bp CCTTCTGCTTCCCTTCTTGTCCTCCTCCCACGATGGGGAGCTCACTACTTACTAGGGCAGGGCTGCTGGTaGCCCATTTTTATGGTTATT +
Preference number: 5 (lower is better)
Translates to: PSASLLVLLPRWGAHYLLGQGCW*PIFMVI
Trigger: AATAACCATAAAAATGGGCAACCAGCAGCCCTGCCC...TAGTAAGTAGTGAGCTCCCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CAA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCTGCCCTTGCTTCTGGTaGGTGAGCGTCTGGATCCCT +
Preference number: 5 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSCPCFW*VSVWIP
Trigger: AGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCA...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp CTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGTGCCCTTGCTTCTGGTaGGTGAGCGTCTGGATCCCT +
Preference number: 5 (lower is better)
Translates to: LTTYYLSSSTICNKVLSQCPCFW*VSVWIP
Trigger: AGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCA...CTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp TCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTTCTGCTTCCCTTCTaGTCCTCCTCCCACGATGGG +
Preference number: 5 (lower is better)
Translates to: SLLTTSPAVPSVTKSSLSLLLPF*SSSHDG
Trigger: CCCATCGTGGGAGGAGGACAAGAAGGGAAGCAGAAG...GCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp GGGAGTGTAGCAATGAGGACGACCAGAGGTCACTCTTGTCGCCATCTTGGTATTGGGCAGGGCTGCTGGTaGCCCATTTTTATGGTTATT +
Preference number: 5 (lower is better)
Translates to: GSVAMRTTRGHSCRHLGIGQGCW*PIFMVI
Trigger: AATAACCATAAAAATGGGCAACCAGCAGCCCTGCCC...AATACCAAGATGGCGACAAGAGTGACCTCTGGTCGTCCTCATTGCTACACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394458.7
ENST00000404085.7
CDS-3UTR CAA 90 bp CTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGAAGCCAATGTCCCTGTaGTCACCTCTGCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: LTTYYLSSSTICNKVLSQKPMSL*SPLHGC
Trigger: GCAGCCATGCAGAGGTGACAACAGGGACATTGGCTT...CTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp CTCACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGTCTGCATGGCTGCTTTaGGAGTGCTATGGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: LTTYYLSSSTICNKVLSQSAWLL*ECYGVQ
Trigger: CTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGA...CTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS-3UTR CAA 90 bp ACTACTTACTACCTCTCCAGCAGTACCATCTGTAACAAAGTCCTCTCTCAGCCTTCTGCATGGCTGCTTTaGGAGTGCTATGGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: TTYYLSSSTICNKVLSQPSAWLL*ECYGVQ
Trigger: CTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGA...AGGCTGAGAGAGGACTTTGTTACAGATGGTACTGCTGGAGAGGTAGTAAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000598347.2
ENST00000652132.1
CDS GCA 72 bp CGCAGTAGGGCCCCGAGGCAACGCAGGCCGCGCGGGTaGCGGGCTCCGGCCGCCAAGTGCACAGCCGCTGCG +
Preference number: 6 (lower is better)
Translates to: RSRAPRQRRPRG*RAPAAKCTAAA
Trigger: CGCAGCGGCTGTGCACTTGGCGGCCGGAGCCCGGCACCCGCGCGGCCTGCGTTGCCTCGGGGCCCTACTGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596099.1
ENST00000596626.1
ENST00000596834.1
ENST00000598347.2
ENST00000601401.5
ENST00000651416.1
ENST00000652132.1
CDS GCA 72 bp TCCTGCAGGACTCGCGCGCACTCCAGGTGTCCCTGCTaGAGGGCCAGGTCCAGCGGCCGGAGTCCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SCRTRAHSRCPC*RARSSGRSPSW
Trigger: CCAGGACGGACTCCGGCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGAGTGCGCGCGAGTCCTGCAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596099.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 72 bp CCTCTGGGCTCACCCAGCCTTTCTTTGCCCGCGCAGTaGCTCCCAACCTGGTCGCGCAGCGCCGGGTCCGCT +
Preference number: 6 (lower is better)
Translates to: PLGSPSLSLPAQ*LPTWSRSAGSA
Trigger: AGCGGACCCGGCGCTGCGCGACCAGGTTGGGAGGCACTGCGCGGGCAAAGAAAGGCTGGGTGAGCCCAGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596626.1
ENST00000596834.1
CDS GCA 72 bp TCCTGCAGGACTCGCGCGCACTCCAGGTGTCCCTGCTaGAGGGCCAGGTCCAGCGGCCGGAGTCCGTCCTAC +
Preference number: 6 (lower is better)
Translates to: SCRTRAHSRCPC*RARSSGRSPSY
Trigger: GTAGGACGGACTCCGGCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGAGTGCGCGCGAGTCCTGCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596626.1
ENST00000596834.1
CDS CCA 72 bp GCTCCTGAGTCTCTGCCCCGATCCGGGTCCGGGTCCTaGTCCGCGTGTCGAGATCCTGCAGGACTCGCGCGC +
Preference number: 6 (lower is better)
Translates to: APESLPRSGSGS*SACRDPAGLAR
Trigger: GCGCGCGAGTCCTGCAGGATCTCGACACGCGGACCAGGACCCGGACCCGGATCGGGGCAGAGACTCAGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596099.1
ENST00000596626.1
ENST00000596834.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 72 bp CCCAGCCTTTCTTTGCCCGCGCAGTGCCTCCCAACCTaGTCGCGCAGCGCCGGGTCCGCTCCTTGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PSLSLPAQCLPT*SRSAGSAPWLS
Trigger: GCTGAGCCAAGGAGCGGACCCGGCGCTGCGCGACCAGGTTGGGAGGCACTGCGCGGGCAAAGAAAGGCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596626.1
ENST00000596834.1
CDS TCA 72 bp AGGCCCTACTCACTGCCAGGTGCAGGCTCGGGCTCCTaGGTCTCTGCCCCGATCCGGGTCCGGGTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: RPYSLPGAGSGS*VSAPIRVRVLV
Trigger: GACCAGGACCCGGACCCGGATCGGGGCAGAGACTCAGGAGCCCGAGCCTGCACCTGGCAGTGAGTAGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596099.1
ENST00000596834.1
CDS GCA 72 bp ATCCGGGTCCGGGTCCTGGTCCGCGTGTCGAGATCCTaGAGGACTCGCGCGCACTCCAGGTGTCCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: IRVRVLVRVSRS*RTRAHSRCPCC
Trigger: GCAGCAGGGACACCTGGAGTGCGCGCGAGTCCTGCAGGATCTCGACACGCGGACCAGGACCCGGACCCGGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596099.1
ENST00000596626.1
ENST00000596834.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 72 bp GGTCCGCGCCGCAGCGCAGCAGCTCCTCTACTGCCCTaGAAACACCGCGGTCAGAGTGGACCCCGGCCAAAG +
Preference number: 6 (lower is better)
Translates to: GPRRSAAAPLLP*KHRGQSGPRPK
Trigger: CTTTGGCCGGGGTCCACTCTGACCGCGGTGTTTGCAGGGCAGTAGAGGAGCTGCTGCGCTGCGGCGCGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601401.5
CDS GCA 72 bp ATTAGGGTCCGCGCCGCAGCGCAGCAGCTCCTCTACTaGCCTGCAAACACCGCGGTCAGAGTGGACCCCGGC +
Preference number: 6 (lower is better)
Translates to: IRVRAAAQQLLY*PANTAVRVDPG
Trigger: GCCGGGGTCCACTCTGACCGCGGTGTTTGCAGGGCAGTAGAGGAGCTGCTGCGCTGCGGCGCGGACCCTAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601401.5
CDS CCA 72 bp AGCTCCTCTACTGCCCTGCAAACACCGCGGTCAGAGTaGACCCCGGCCAAAGACCCCCACTCCTGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: SSSTALQTPRSE*TPAKDPHSWPA
Trigger: GGCGGGCCAGGAGTGGGGGTCTTTGGCCGGGGTCCACTCTGACCGCGGTGTTTGCAGGGCAGTAGAGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601401.5
CDS GCA 72 bp AAGTCAAGCCCCAGCAGCCCTGCAGGCCCTACTCACTaGCAGGTGCAGGCTCGGGCTCCTGAGTCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: KSSPSSPAGPTH*QVQARAPESLP
Trigger: GGGCAGAGACTCAGGAGCCCGAGCCTGCACCTGGCAGTGAGTAGGGCCTGCAGGGCTGCTGGGGCTTGACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596099.1
ENST00000596834.1
CDS TCA 72 bp TCGGGGTTCGAGAGCTTTAGTGTCCTCAGGGGCCCTTaGCACCCGGAGGCGCTCAAGCAGGGTCTGGGACCG +
Preference number: 6 (lower is better)
Translates to: SGFESFSVLRGP*HPEALKQGLGP
Trigger: CGGTCCCAGACCCTGCTTGAGCGCCTCCGGGTGTCAAGGGCCCCTGAGGACACTAAAGCTCTCGAACCCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404261.9
ENST00000601401.5
CDS CCA 72 bp CTTCACGACCCCCTCCCGCCACCTCCTGGCAGGATCTaGCTGCTCAAACTGCTGGGCCAGCGCGTCTTCATC +
Preference number: 6 (lower is better)
Translates to: LHDPLPPPPGRI*LLKLLGQRVFI
Trigger: GATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGGTGGCGGGAGGGGGTCGTGAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 72 bp CTGCTGGGCCAGCGCGTCTTCATCTGCCTGGACATCTaGAATACAGCCCGTCCGCAGGGCTGCAGCCAGTTC +
Preference number: 6 (lower is better)
Translates to: LLGQRVFICLDI*NTARPQGCSQF
Trigger: GAACTGGCTGCAGCCCTGCGGACGGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGCGCTGGCCCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CAA 72 bp TCCCAGTGCCCTGGAGGGGACGCCGAGCTCCCATGTTaGTCCACAGTTTCAAGGGGAACAGGGAGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SQCPGGDAELPC*STVSRGTGRLG
Trigger: CCCCAGCCTCCCTGTTCCCCTTGAAACTGTGGACAAACATGGGAGCTCGGCGTCCCCTCCAGGGCACTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 72 bp GCAAGGGCCGACAGGTTCCCTGCCACCTGTAGAGCTTaGCTCATCCTCTGTCAGCCAGAGCGTGGCCATGTC +
Preference number: 6 (lower is better)
Translates to: ARADRFPATCRA*LILCQPERGHV
Trigger: GACATGGCCACGCTCTGGCTGACAGAGGATGAGGCAAGCTCTACAGGTGGCAGGGAACCTGTCGGCCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 72 bp TGGCTGCTCAAACTGCTGGGCCAGCGCGTCTTCATCTaGCTGGACATCTGGAATACAGCCCGTCCGCAGGGC +
Preference number: 6 (lower is better)
Translates to: WLLKLLGQRVFI*LDIWNTARPQG
Trigger: GCCCTGCGGACGGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 72 bp TCCCGCCACCTCCTGGCAGGATCTGGCTGCTCAAACTaGTGGGCCAGCGCGTCTTCATCTGCCTGGACATCT +
Preference number: 6 (lower is better)
Translates to: SRHLLAGSGCSN*WASASSSAWTS
Trigger: AGATGTCCAGGCAGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGGTGGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 72 bp CGCCACCTCCTGGCAGGATCTGGCTGCTCAAACTGCTaGGCCAGCGCGTCTTCATCTGCCTGGACATCTGGA +
Preference number: 6 (lower is better)
Translates to: RHLLAGSGCSNC*ASASSSAWTSG
Trigger: TCCAGATGTCCAGGCAGATGAAGACGCGCTGGCCCAGCAGTTTGAGCAGCCAGATCCTGCCAGGAGGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CAA 90 bp GCGACGAGCAGGTGGCCAGCCTGCCACCACTCCATAGCAGTGCCCTaGCTTCTGGTTGGTGAGCGTCTGGATCCCTGTTTTCTTGACCGC +
Preference number: 6 (lower is better)
Translates to: ATSRWPACHHSIAVP*LLVGERLDPCFLDR
Trigger: GCGGTCAAGAAAACAGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCACTGCTATGGAGTGGTGGCAGGCTGGCCACCTGCTCGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598347.2
CDS TCA 72 bp TCCAGAGACCTCAACCGCTGTGACGAAAGAGGCGTCTaGGCTGTAATCCCAGTGCCCTGGAGGGGACGCCGA +
Preference number: 6 (lower is better)
Translates to: SRDLNRCDERGV*AVIPVPWRGRR
Trigger: TCGGCGTCCCCTCCAGGGCACTGGGATTACAGCTCAGACGCCTCTTTCGTCACAGCGGTTGAGGTCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 72 bp GGTCAGAGTCAGGGCCTGCAGACGGGCATTCAGTTCTaGCTCCGTGCCCTGAGACCTAGGTACCCTCTGGTT +
Preference number: 6 (lower is better)
Translates to: GQSQGLQTGIQF*LRALRPRYPLV
Trigger: AACCAGAGGGTACCTAGGTCTCAGGGCACGGAGGCAGAACTGAATGCCCGTCTGCAGGCCCTGACTCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 72 bp AGCAACTCCAAGTCAGACACAGTGGAGACTGGCAGGTaGCGGCAAGGGCCGACAGGTTCCCTGCCACCTGTA +
Preference number: 6 (lower is better)
Translates to: SNSKSDTVETGR*RQGPTGSLPPV
Trigger: TACAGGTGGCAGGGAACCTGTCGGCCCTTGCCGGCACCTGCCAGTCTCCACTGTGTCTGACTTGGAGTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 72 bp TGCTCAAACTGCTGGGCCAGCGCGTCTTCATCTGCCTaGACATCTGGAATACAGCCCGTCCGCAGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: CSNCWASASSSA*TSGIQPVRRAA
Trigger: TGCAGCCCTGCGGACGGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGCGCTGGCCCAGCAGTTTGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS TCA 72 bp AGGCTGGGTCCTCAGCTCCAGAGACCTCAACCGCTGTaGCGAAAGAGGCGTCTGAGCTGTAATCCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: RLGPQLQRPQPL*RKRRLSCNPSA
Trigger: GGCACTGGGATTACAGCTCAGACGCCTCTTTCGTCACAGCGGTTGAGGTCTCTGGAGCTGAGGACCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS TCA 72 bp GCCTGCAGACGGGCATTCAGTTCTGCCTCCGTGCCCTaGGACCTAGGTACCCTCTGGTTGGCATGGACAACA +
Preference number: 6 (lower is better)
Translates to: ACRRAFSSASVP*DLGTLWLAWTT
Trigger: TGTTGTCCATGCCAACCAGAGGGTACCTAGGTCTCAGGGCACGGAGGCAGAACTGAATGCCCGTCTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS TCA 72 bp CCCTCGTCCCTTTGCCCACGTAGAAGATGGCACGGATaGAAGTCTGAAGGCGCTCAGCTGGGGTCAGTGAGA +
Preference number: 6 (lower is better)
Translates to: PSSLCPRRRWHG*KSEGAQLGSVR
Trigger: TCTCACTGACCCCAGCTGAGCGCCTTCAGACTTTCATCCGTGCCATCTTCTACGTGGGCAAAGGGACGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CCA 72 bp CCTCTGTCAGCCAGAGCGTGGCCATGTCACTATCAATaGATGTCTGGTGCTCCCACAGGCAGTGGCAGTCAG +
Preference number: 6 (lower is better)
Translates to: PLSARAWPCHYQ*MSGAPTGSGSQ
Trigger: CTGACTGCCACTGCCTGTGGGAGCACCAGACATCCATTGATAGTGACATGGCCACGCTCTGGCTGACAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CAA 72 bp GGGGGTCCTGGGTCAGCCTCCAAGCCAATGTCCCTGTaGTCACCTCTGCATGGCTGCTTTTGGAGTGCTATG +
Preference number: 6 (lower is better)
Translates to: GGPGSASKPMSL*SPLHGCFWSAM
Trigger: CATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAACAGGGACATTGGCTTGGAGGCTGACCCAGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CAA 72 bp AGGTGGCCAGCCTGCCACCACTCCATAGCAGTGCCCTaGCTTCTGGTTGGTGAGCGTCTGGATCCCTGTTTT +
Preference number: 6 (lower is better)
Translates to: RWPACHHSIAVP*LLVGERLDPCF
Trigger: AAAACAGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCACTGCTATGGAGTGGTGGCAGGCTGGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598347.2
CDS TCA 72 bp TGGTGGTACAACTGCCTGGTGAAGGGTGTGATGGGGTaGGGATTCTCACCAAGTGCTCGGAGTCCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: WWYNCLVKGVMG*GFSPSARSPFS
Trigger: GCTGAAGGGACTCCGAGCACTTGGTGAGAATCCTCACCCCATCACACCCTTCACCAGGCAGTTGTACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000596626.1
CDS CCA 72 bp AGCCAGAGCGTGGCCATGTCACTATCAATGGATGTCTaGTGCTCCCACAGGCAGTGGCAGTCAGAAGCTCCA +
Preference number: 6 (lower is better)
Translates to: SQSVAMSLSMDV*CSHRQWQSEAP
Trigger: TGGAGCTTCTGACTGCCACTGCCTGTGGGAGCACCAGACATCCATTGATAGTGACATGGCCACGCTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS CAA 90 bp AGCCTCCAAGCCAATGTCCCTGTTGTCACCTCTGCATGGCTGCTTTaGGAGTGCTATGGAGTCCAGCGTCTCATCGGTAGGTCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: SLQANVPVVTSAWLL*ECYGVQRLIGRSRE
Trigger: CTCTCTGGACCTACCGATGAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAACAGGGACATTGGCTTGGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 72 bp GTCCCTGTTGTCACCTCTGCATGGCTGCTTTTGGAGTaGTATGGAGTCCAGCGTCTCATCGGTAGGTCCAGA +
Preference number: 6 (lower is better)
Translates to: VPVVTSAWLLLE*YGVQRLIGRSR
Trigger: TCTGGACCTACCGATGAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAACAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1
CDS GCA 72 bp GGTGAAGGGTGTGATGGGGTGAGGATTCTCACCAAGTaGTCGGAGTCCCTTCAGCAACTCCAAGTCAGACAC +
Preference number: 6 (lower is better)
Translates to: GEGCDGVRILTK*SESLQQLQVRH
Trigger: GTGTCTGACTTGGAGTTGCTGAAGGGACTCCGAGCACTTGGTGAGAATCCTCACCCCATCACACCCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000596626.1
CDS CCA 72 bp ACAAATAGTGGATGTGAGACGGTCAGAACCAATGGGTaGGGTGGGGAAGACCCTGGATGTCAGGGACTGGTC +
Preference number: 6 (lower is better)
Translates to: TNSGCETVRTNG*GGEDPGCQGLV
Trigger: GACCAGTCCCTGACATCCAGGGTCTTCCCCACCCCACCCATTGGTTCTGACCGTCTCACATCCACTATTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596099.1
CDS CCA 72 bp CCAATGTCCCTGTTGTCACCTCTGCATGGCTGCTTTTaGAGTGCTATGGAGTCCAGCGTCTCATCGGTAGGT +
Preference number: 6 (lower is better)
Translates to: PMSLLSPLHGCF*SAMESSVSSVG
Trigger: ACCTACCGATGAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCATGCAGAGGTGACAACAGGGACATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394458.7
ENST00000404085.7
ENST00000404261.9
ENST00000594072.6
ENST00000596626.1
ENST00000598347.2
ENST00000651416.1
ENST00000652132.1