Pregenerated sensors for ANKH-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272057Ensembl transcript IDs: ENST00000607026.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCCTGCTGCCCTGGCGCATGTCCTCCAGGGACACGGGCCACCGTTaGCCCTGGAAACCCTGGGGGACAGGCTCCCTCCTGGGCGACCTT | + |
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Preference number: 5 (lower is better) Translates to: SLLPWRMSSRDTGHR*PWKPWGTGSLLGDL Trigger: AAGGTCGCCCAGGAGGGAGCCTGTCCCCCAGGGTTTCCAGGGGCAACGGTGGCCCGTGTCCCTGGAGGACATGCGCCAGGGCAGCAGGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607026.1 |
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| CDS CCA 90 bp | CGCATGTCCTCCAGGGACACGGGCCACCGTTGCCCCTGGAAACCCTaGGGGACAGGCTCCCTCCTGGGCGACCTTTCCACGTTTCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RMSSRDTGHRCPWKP*GTGSLLGDLSTFLS Trigger: CGAAAGAAACGTGGAAAGGTCGCCCAGGAGGGAGCCTGTCCCCCAGGGTTTCCAGGGGCAACGGTGGCCCGTGTCCCTGGAGGACATGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607026.1 |
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| CDS CAA 90 bp | CTCCCTGCTGCCCTGGCGCATGTCCTCCAGGGACACGGGCCACCGTaGCCCCTGGAAACCCTGGGGGACAGGCTCCCTCCTGGGCGACCT | + |
|
Preference number: 6 (lower is better) Translates to: LPAALAHVLQGHGPP*PLETLGDRLPPGRP Trigger: AGGTCGCCCAGGAGGGAGCCTGTCCCCCAGGGTTTCCAGGGGCAACGGTGGCCCGTGTCCCTGGAGGACATGCGCCAGGGCAGCAGGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607026.1 |
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| CDS CCA 72 bp | TCCAGGGACACGGGCCACCGTTGCCCCTGGAAACCCTaGGGGACAGGCTCCCTCCTGGGCGACCTTTCCACG | + |
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Preference number: 6 (lower is better) Translates to: SRDTGHRCPWKP*GTGSLLGDLST Trigger: CGTGGAAAGGTCGCCCAGGAGGGAGCCTGTCCCCCAGGGTTTCCAGGGGCAACGGTGGCCCGTGTCCCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607026.1 |
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