RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKFY1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185722

Ensembl transcript IDs: ENST00000341657.9, ENST00000570535.5, ENST00000570934.5, ENST00000571547.1, ENST00000572412.5, ENST00000572564.1, ENST00000574367.5, ENST00000574736.1, ENST00000575298.1, ENST00000575509.1, ENST00000575955.1, ENST00000648043.1

Found 1663 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCACCCCGAGGCGAGCCCCCGACCGGACGATGGCGCGGCACAAGTTaGCGTTCCCTTTCATGTATGCCAGGAGCAGCACCGTGCTGCCGT +
Preference number: 1 (lower is better)
Translates to: SPRGEPPTGRWRGTS*RSLSCMPGAAPCCR
Trigger: ACGGCAGCACGGTGCTGCTCCTGGCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp GGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTGGGTTGGCGCCTTaGTGCAGGAGCTCTGCCGTGAGGTTGGCCAGGCCATGCCGACAC +
Preference number: 1 (lower is better)
Translates to: GRGRASSVCRFGLAP*CRSSAVRLARPCRH
Trigger: GTGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 90 bp CCGTCTGCAGGTTTGGGTTGGCGCCTTGCTGCAGGAGCTCTGCCGTaGGGTTGGCCAGGCCATGCCGACACGCTGTGTGCAACGGGGTTT +
Preference number: 1 (lower is better)
Translates to: PSAGLGWRLAAGALP*GWPGHADTLCATGF
Trigger: AAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp TTCCTCCGTCTGCAGGTTTGGGTTGGCGCCTTGCTGCAGGAGCTCTaGCGTGAGGTTGGCCAGGCCATGCCGACACGCTGTGTGCAACGG +
Preference number: 1 (lower is better)
Translates to: FLRLQVWVGALLQEL*REVGQAMPTRCVQR
Trigger: CCGTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp AGAGGCAGAGCTTCCTCCGTCTGCAGGTTTGGGTTGGCGCCTTGCTaGAGGAGCTCTGCCGTGAGGTTGGCCAGGCCATGCCGACACGCT +
Preference number: 1 (lower is better)
Translates to: RGRASSVCRFGLAPC*RSSAVRLARPCRHA
Trigger: AGCGTGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp GTCAGGGATGCGGCCTCCTTTGGCAGAGGCAGAGCTTCCTCCGTCTaGAGGTTTGGGTTGGCGCCTTGCTGCAGGAGCTCTGCCGTGAGG +
Preference number: 1 (lower is better)
Translates to: VRDAASFGRGRASSV*RFGLAPCCRSSAVR
Trigger: CCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp AAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATaGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCA +
Preference number: 1 (lower is better)
Translates to: KVAHTWPGPLAGGPS*GRASYTELGPTALA
Trigger: TGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CCA 90 bp TGCGGCCTCCTTTGGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTaGGTTGGCGCCTTGCTGCAGGAGCTCTGCCGTGAGGTTGGCCAG +
Preference number: 1 (lower is better)
Translates to: CGLLWQRQSFLRLQV*VGALLQELCREVGQ
Trigger: CTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp CAGATGGACGCTGTCCGCCAAGCTGGTCAGGGATGCGGCCTCCTTTaGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTGGGTTGGCGCC +
Preference number: 1 (lower is better)
Translates to: QMDAVRQAGQGCGLL*QRQSFLRLQVWVGA
Trigger: GGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCCCTGACCAGCTTGGCGGACAGCGTCCATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp TCGCCATGTGCAGTGGCGTCTGCAGATGGACGCTGTCCGCCAAGCTaGTCAGGGATGCGGCCTCCTTTGGCAGAGGCAGAGCTTCCTCCG +
Preference number: 1 (lower is better)
Translates to: SPCAVASADGRCPPS*SGMRPPLAEAELPP
Trigger: CGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTGCACATGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp CAGTGGCGTCTGCAGATGGACGCTGTCCGCCAAGCTGGTCAGGGATaGGGCCTCCTTTGGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTT +
Preference number: 1 (lower is better)
Translates to: QWRLQMDAVRQAGQG*GLLWQRQSFLRLQV
Trigger: AACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp AAGTCAGGAAGGATGGCACAGGCCTGGCAGGCTGCCTGGAAACTGTaGACCTTCAGCCTCCAGCAGGAAAGCCACCCGTCTGCAGGCTCC +
Preference number: 1 (lower is better)
Translates to: KSGRMAQAWQAAWKL*TFSLQQESHPSAGS
Trigger: GGAGCCTGCAGACGGGTGGCTTTCCTGCTGGAGGCTGAAGGTGCACAGTTTCCAGGCAGCCTGCCAGGCCTGTGCCATCCTTCCTGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
3UTR GCA 90 bp TTGGCGCCTTGCTGCAGGAGCTCTGCCGTGAGGTTGGCCAGGCCATaGCGACACGCTGTGTGCAACGGGGTTTCTCCCCACTTGTTTCTG +
Preference number: 1 (lower is better)
Translates to: LAPCCRSSAVRLARP*RHAVCNGVSPHLFL
Trigger: CAGAAACAAGTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp GCGCTCTTGCTGTCCTGCCGCTGTATGGCCATGTGCAGTAGCGTCTaGCCATCCGACATGGTGTCATTGATGGCGGCTCCAGAGCCCAGC +
Preference number: 1 (lower is better)
Translates to: ALLLSCRCMAMCSSV*PSDMVSLMAAPEPS
Trigger: GCTGGGCTCTGGAGCCGCCATCAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCAGGACAGCAAGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp CCATCCGACATGGTGTCATTGATGGCGGCTCCAGAGCCCAGCAGCTaGGCTGCGATCGTGTGCATGCCAGTCCATAATGCCAGGCCCAGC +
Preference number: 1 (lower is better)
Translates to: PSDMVSLMAAPEPSS*AAIVCMPVHNARPS
Trigger: GCTGGGCCTGGCATTATGGACTGGCATGCACACGATCGCAGCCCAGCTGCTGGGCTCTGGAGCCGCCATCAATGACACCATGTCGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp CCACGGCAGCAAAGTCCACGCCATTCTCTAGGAGGACTGAGCAGATaGTGGGCAGGTCCTGCTGGGCAGCAAGATGGAGGGCAGTCTGGC +
Preference number: 1 (lower is better)
Translates to: PRQQSPRHSLGGLSR*WAGPAGQQDGGQSG
Trigger: GCCAGACTGCCCTCCATCTTGCTGCCCAGCAGGACCTGCCCACCATCTGCTCAGTCCTCCTAGAGAATGGCGTGGACTTTGCTGCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp CTCCCTGGTTGTTATTCACCCCGAGGCGAGCCCCCGACCGGACGATaGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATGCCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: LPGCYSPRGEPPTGR*RGTSWRSLSCMPGA
Trigger: TGCTCCTGGCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAATAACAACCAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 90 bp GCGGTGGGCTCGTTGTTTTCATCAATGGCTCTGTGCAGGAGCGTCTaGAGGCACCCACCAGGTCCCGGACCCCAGCATGTGGCATCACAG +
Preference number: 1 (lower is better)
Translates to: AVGSLFSSMALCRSV*RHPPGPGPQHVASQ
Trigger: CTGTGATGCCACATGCTGGGGTCCGGGACCTGGTGGGTGCCTTCAGACGCTCCTGCACAGAGCCATTGATGAAAACAACGAGCCCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp GACAGACACCACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTaGCGTCTGCAGATGGACGCTGTCCGCCAAGCTGGTCAGGGATGC +
Preference number: 1 (lower is better)
Translates to: DRHHIRMVIGDRHVQ*RLQMDAVRQAGQGC
Trigger: GCATCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTGTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 90 bp CGGGGACATCTTCGAAGGGGTTCACAGACTGGTCAGAAGACACTGTaGTATGCTGCACTGCCAGCCACAGAGCCGTGCTGCCCTCGTGGT +
Preference number: 1 (lower is better)
Translates to: RGHLRRGSQTGQKTL*YAALPATEPCCPRG
Trigger: ACCACGAGGGCAGCACGGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACCAGTCTGTGAACCCCTTCGAAGATGTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp AGCAGGAAGAGTGCGCTCTTGCTGTCCTGCCGCTGTATGGCCATGTaGAGTAGCGTCTGCCCATCCGACATGGTGTCATTGATGGCGGCT +
Preference number: 1 (lower is better)
Translates to: SRKSALLLSCRCMAM*SSVCPSDMVSLMAA
Trigger: AGCCGCCATCAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCAGGACAGCAAGAGCGCACTCTTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp ATATCTGCCTGGTGCTCCAGCAGGAAGAGTGCGCTCTTGCTGTCCTaGCGCTGTATGGCCATGTGCAGTAGCGTCTGCCCATCCGACATG +
Preference number: 1 (lower is better)
Translates to: ISAWCSSRKSALLLS*RCMAMCSSVCPSDM
Trigger: CATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCAGGACAGCAAGAGCGCACTCTTCCTGCTGGAGCACCAGGCAGATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp GGTTTCTCCCCACTTGTTTCTGTGGTTGACATGGGCACCGTTGGTTaGCAGGAAAAGAGCTGCTGCCTCGTTTCCTGCTCCAGCTGCCCG +
Preference number: 1 (lower is better)
Translates to: GFSPLVSVVDMGTVG*QEKSCCLVSCSSCP
Trigger: CGGGCAGCTGGAGCAGGAAACGAGGCAGCAGCTCTTTTCCTGGCAACCAACGGTGCCCATGTCAACCACAGAAACAAGTGGGGAGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp CCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATACCCCGGCATaGATTCTAGGAAGAGATCAAAGATGGCCGCTGCATTCTCCTTGC +
Preference number: 1 (lower is better)
Translates to: PCCRLHPACPEDTPA*ILGRDQRWPLHSPC
Trigger: GCAAGGAGAATGCAGCGGCCATCTTTGATCTCTTCCTAGAATGCATGCCGGGGTATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp CAGATGGTGGGCAGGTCCTGCTGGGCAGCAAGATGGAGGGCAGTCTaGCGATGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGC +
Preference number: 1 (lower is better)
Translates to: QMVGRSCWAARWRAV*RCLVNSFTLAPARS
Trigger: GCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCATCGCCAGACTGCCCTCCATCTTGCTGCCCAGCAGGACCTGCCCACCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp CAGTTTCCTGTCGCCGTGTCAGGTGCGTCTGTGTGGCTGCCGCGCTaGATGAGTCTGGCTGCAAAGCTGTTCTCATCAAATGAAGTCCCA +
Preference number: 1 (lower is better)
Translates to: QFPVAVSGASVWLPR*MSLAAKLFSSNEVP
Trigger: TGGGACTTCATTTGATGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACCTGACACGGCGACAGGAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp CGCTGTAGTAAACAGTTTCCTGTCGCCGTGTCAGGTGCGTCTGTGTaGCTGCCGCGCTGGATGAGTCTGGCTGCAAAGCTGTTCTCATCA +
Preference number: 1 (lower is better)
Translates to: RCSKQFPVAVSGASV*LPRWMSLAAKLFSS
Trigger: TGATGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACCTGACACGGCGACAGGAAACTGTTTACTACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 90 bp CTGAGAGGCTCTGCCTCATCAGTCAGCCCAGGCGGGAAGACTTCATaGATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGGT +
Preference number: 1 (lower is better)
Translates to: LRGSASSVSPGGKTS*MLWDGHQATGRGNG
Trigger: ACCATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCCCGCCTGGGCTGACTGATGAGGCAGAGCCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR TCA 90 bp ACACACACACTGAGATCCACACAGGGACCCATTCAGGGACAAGAGTaGGGACACAGAACGGGGTGGTCAGAAATGACTCGGGGCTCTGAG +
Preference number: 1 (lower is better)
Translates to: THTLRSTQGPIQGQE*GHRTGWSEMTRGSE
Trigger: CTCAGAGCCCCGAGTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCCTGTGTGGATCTCAGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR GCA 90 bp GAAATGGGATCTATCACACCATGGTCCTTAATCGTTCCAGTCTATTaGCGCAGGAAGACACCCGCCAGCTCCTGCTCTGGGTGGGGTCAG +
Preference number: 1 (lower is better)
Translates to: EMGSITPWSLIVPVY*RRKTPASSCSGWGQ
Trigger: CTGACCCCACCCAGAGCAGGAGCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATAGATCCCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR GCA 90 bp TCTTCGAAGGGGTTCACAGACTGGTCAGAAGACACTGTGATATGCTaGACTGCCAGCCACAGAGCCGTGCTGCCCTCGTGGTCTTTGAGT +
Preference number: 1 (lower is better)
Translates to: SSKGFTDWSEDTVIC*TASHRAVLPSWSLS
Trigger: ACTCAAAGACCACGAGGGCAGCACGGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACCAGTCTGTGAACCCCTTCGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp ACATCTTCGAAGGGGTTCACAGACTGGTCAGAAGACACTGTGATATaGTGCACTGCCAGCCACAGAGCCGTGCTGCCCTCGTGGTCTTTG +
Preference number: 1 (lower is better)
Translates to: TSSKGFTDWSEDTVI*CTASHRAVLPSWSL
Trigger: CAAAGACCACGAGGGCAGCACGGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACCAGTCTGTGAACCCCTTCGAAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp GCGATCGTGTGCATGCCAGTCCATAATGCCAGGCCCAGCACAGTCTaGTCTCGGGAATCTTTGAGGCTGAAGTCCGGAATGATCTGCAAG +
Preference number: 1 (lower is better)
Translates to: AIVCMPVHNARPSTV*SRESLRLKSGMICK
Trigger: CTTGCAGATCATTCCGGACTTCAGCCTCAAAGATTCCCGAGACCAGACTGTGCTGGGCCTGGCATTATGGACTGGCATGCACACGATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 90 bp TTCCTGTCGCCGTGTCAGGTGCGTCTGTGTGGCTGCCGCGCTGGATaGGTCTGGCTGCAAAGCTGTTCTCATCAAATGAAGTCCCATTTA +
Preference number: 1 (lower is better)
Translates to: FLSPCQVRLCGCRAG*VWLQSCSHQMKSHL
Trigger: TAAATGGGACTTCATTTGATGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACCTGACACGGCGACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 90 bp GAGGCTCTGCCTCATCAGTCAGCCCAGGCGGGAAGACTTCATGAATaGTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGGTTTTC +
Preference number: 1 (lower is better)
Translates to: EALPHQSAQAGRLHE*SGMDTKLLEGEMVF
Trigger: GAAAACCATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCCCGCCTGGGCTGACTGATGAGGCAGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR GCA 90 bp TGGAGGTCAAGCTCTCCCCTTTCCCAAGACGTTCCCTCCACTCCGTaGCCGTGGAGAAGATTAGTGCAGAAACGGTTCAATATGGCAGGT +
Preference number: 1 (lower is better)
Translates to: WRSSSPLSQDVPSTP*PWRRLVQKRFNMAG
Trigger: ACCTGCCATATTGAACCGTTTCTGCACTAATCTTCTCCACGGGCACGGAGTGGAGGGAACGTCTTGGGAAAGGGGAGAGCTTGACCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR GCA 90 bp AAACTCCAGAAGACACTGTACTGTCTCTTCCAGCCCCCAAGAGGCTaGCAAATGCAAAGGGGTCTGCCCATCTCTAGCCTCTTCCTCTCC +
Preference number: 1 (lower is better)
Translates to: KLQKTLYCLFQPPRG*QMQRGLPISSLFLS
Trigger: GGAGAGGAAGAGGCTAGAGATGGGCAGACCCCTTTGCATTTGGCAGCCTCTTGGGGGCTGGAAGAGACAGTACAGTGTCTTCTGGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp TCAAGCTCTCCCCTTTCCCAAGACGTTCCCTCCACTCCGTGCCCGTaGAGAAGATTAGTGCAGAAACGGTTCAATATGGCAGGTGTGGGA +
Preference number: 1 (lower is better)
Translates to: SSSPLSQDVPSTPCP*RRLVQKRFNMAGVG
Trigger: TCCCACACCTGCCATATTGAACCGTTTCTGCACTAATCTTCTCCACGGGCACGGAGTGGAGGGAACGTCTTGGGAAAGGGGAGAGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR CCA 90 bp GAAGTCCCATTTACCACGGGGACATCTTCGAAGGGGTTCACAGACTaGTCAGAAGACACTGTGATATGCTGCACTGCCAGCCACAGAGCC +
Preference number: 1 (lower is better)
Translates to: EVPFTTGTSSKGFTD*SEDTVICCTASHRA
Trigger: GGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACCAGTCTGTGAACCCCTTCGAAGATGTCCCCGTGGTAAATGGGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 90 bp AACAAGCTCCAGCCACTCTTGTCCACCATGTCCACATCAGCTTTGTaGCTAACCAGCGTGGTGGCAATACTCTCCAGTCGTCGTGAGAGG +
Preference number: 1 (lower is better)
Translates to: NKLQPLLSTMSTSAL*LTSVVAILSSRRER
Trigger: CCTCTCACGACGACTGGAGAGTATTGCCACCACGCTGGTTAGTCACAAAGCTGATGTGGACATGGTGGACAAGAGTGGCTGGAGCTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp CTCATCAGTCAGCCCAGGCGGGAAGACTTCATGAATGCTCTGGGATaGACACCAAGCTACTGGAAGGGGAAATGGTTTTCCAAGTGTCCC +
Preference number: 1 (lower is better)
Translates to: LISQPRREDFMNALG*TPSYWKGKWFSKCP
Trigger: GGGACACTTGGAAAACCATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCCCGCCTGGGCTGACTGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CCA 90 bp AGAAACGGTTCAATATGGCAGGTGTGGGACATGAGCGGGGAGGAGTaGAGAAACCACACACACACTGAGATCCACACAGGGACCCATTCA +
Preference number: 1 (lower is better)
Translates to: RNGSIWQVWDMSGEE*RNHTHTEIHTGTHS
Trigger: TGAATGGGTCCCTGTGTGGATCTCAGTGTGTGTGTGGTTTCTCCACTCCTCCCCGCTCATGTCCCACACCTGCCATATTGAACCGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR TCA 90 bp TCCAGTCGTCGTGAGAGGGCTAGATCTAATGCCAGATCTCCGTTATaGTCCGCTTCATTCAGCTTCCCAGGGAGCTGGGAATCCATTTCA +
Preference number: 1 (lower is better)
Translates to: SSRRERARSNARSPL*SASFSFPGSWESIS
Trigger: TGAAATGGATTCCCAGCTCCCTGGGAAGCTGAATGAAGCGGATCATAACGGAGATCTGGCATTAGATCTAGCCCTCTCACGACGACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp TGTTTCTTTGAACTGTACAAGGCCACAAGGTGCAGTGGTGTCTCCTaGGCACCCAGTGTAGCAGCGTTGACAAAGGCCCCATTCTTAATG +
Preference number: 1 (lower is better)
Translates to: CFFELYKATRCSGVS*APSVAALTKAPFLM
Trigger: CATTAAGAATGGGGCCTTTGTCAACGCTGCTACACTGGGTGCCCAGGAGACACCACTGCACCTTGTGGCCTTGTACAGTTCAAAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp GGTAGTTCTTCTGGGACTTGTCCCAAGGGAAGCAAGTGTCTGTCATaGAAACATTACCCTTCCTTGTTCCTGCTACTGTCACCTGGGAAG +
Preference number: 1 (lower is better)
Translates to: GSSSGTCPKGSKCLS*KHYPSLFLLLSPGK
Trigger: CTTCCCAGGTGACAGTAGCAGGAACAAGGAAGGGTAATGTTTCCATGACAGACACTTGCTTCCCTTGGGACAAGTCCCAGAAGAACTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR CCA 90 bp TGTCCAGAGGATACCCCGGCATGCATTCTAGGAAGAGATCAAAGATaGCCGCTGCATTCTCCTTGCCATATTGTCCCAAAATGTGCAGTG +
Preference number: 1 (lower is better)
Translates to: CPEDTPACILGRDQR*PLHSPCHIVPKCAV
Trigger: CACTGCACATTTTGGGACAATATGGCAAGGAGAATGCAGCGGCCATCTTTGATCTCTTCCTAGAATGCATGCCGGGGTATCCTCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 90 bp ACTAAAGGTCACGTAGACCCCACTCCTTGGAGAGAACGTGGCAGGTaGACTGAGCAATCGAATCCAGCCTCAACTAAATTGGTAATTGGG +
Preference number: 1 (lower is better)
Translates to: TKGHVDPTPWRERGR*TEQSNPASTKLVIG
Trigger: CCCAATTACCAATTTAGTTGAGGCTGGATTCGATTGCTCAGTTCACCTGCCACGTTCTCTCCAAGGAGTGGGGTCTACGTGACCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR TCA 90 bp AAGTCTGTGGAAAGAGGCTTTTCCTATATCCACATGGATGCGCCCTaGAGCCAATGGAAAACAGGACTCAATGTTCTCCCAGTCCATAGC +
Preference number: 1 (lower is better)
Translates to: KSVERGFSYIHMDAP*SQWKTGLNVLPVHS
Trigger: GCTATGGACTGGGAGAACATTGAGTCCTGTTTTCCATTGGCTTCAGGGCGCATCCATGTGGATATAGGAAAAGCCTCTTTCCACAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR GCA 90 bp GACACTGATCAGGAACAGCACACTTTCAATATCAGAGTTCTGAACTaGCACATGAAGGAAATTCCGGCCCTTGTTATCCACCTGCTCAGC +
Preference number: 1 (lower is better)
Translates to: DTDQEQHTFNIRVLN*HMKEIPALVIHLLS
Trigger: GCTGAGCAGGTGGATAACAAGGGCCGGAATTTCCTTCATGTGGCAGTTCAGAACTCTGATATTGAAAGTGTGCTGTTCCTGATCAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 90 bp TGCCTGCTTCCTTATGGCCCTTTCCAGGTAATAGAAAATGGAAACTaGCCACATGCCTCACATGGCCAAATGTTTGCCAAGACTAGCAGA +
Preference number: 1 (lower is better)
Translates to: CLLPYGPFQVIENGN*PHASHGQMFAKTSR
Trigger: TCTGCTAGTCTTGGCAAACATTTGGCCATGTGAGGCATGTGGTCAGTTTCCATTTTCTATTACCTGGAAAGGGCCATAAGGAAGCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR TCA 90 bp GAGTTTTTCCTTGGAGATTCGTGTGAGCTGAGGTCCAGTCAAAGCTaGTCATTAGAATCACTGATGCAGGGATGTGTGAGGGTATTTTTG +
Preference number: 1 (lower is better)
Translates to: EFFLGDSCELRSSQS*SLESLMQGCVRVFL
Trigger: CAAAAATACCCTCACACATCCCTGCATCAGTGATTCTAATGATCAGCTTTGACTGGACCTCAGCTCACACGAATCTCCAAGGAAAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR TCA 90 bp GATTTGCTAGTTTCATCAGTTCAGTCAGGAACACATCATCCTCTCTaGACTCCAGCTCATCTGTATAGATCCAGCGAAGCATTGTCATCG +
Preference number: 1 (lower is better)
Translates to: DLLVSSVQSGTHHPL*TPAHLYRSSEALSS
Trigger: CGATGACAATGCTTCGCTGGATCTATACAGATGAGCTGGAGTTCAGAGAGGATGATGTGTTCCTGACTGAACTGATGAAACTAGCAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 90 bp AAATTGGTAATTGGGGTTGACCGTGCACAGGCCCAAAACTCCAAATaGAACACATGTTCTAACACATCGTTCAGTGAGACACCACGAAAA +
Preference number: 1 (lower is better)
Translates to: KLVIGVDRAQAQNSK*NTCSNTSFSETPRK
Trigger: TTTTCGTGGTGTCTCACTGAACGATGTGTTAGAACATGTGTTCCATTTGGAGTTTTGGGCCTGTGCACGGTCAACCCCAATTACCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACAGCTGCTGGGGAGGTaGCCAAGGACGTGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAQLLGR*PRTWPG
Trigger: TCCAGGCCACGTCCTTGGTCACCTCCCCAGCAGCTG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp ACTCCCTGGTTGTTATTCACCCCGAGGCGAGCCCCCGACCGGACGATGGCGCGGCTGTGCAGGAGCGTCTaGAGGCACCCACCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: TPWLLFTPRRAPDRTMARLCRSV*RHPPGP
Trigger: GGGACCTGGTGGGTGCCTTCAGACGCTCCTGCACAG...CCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAATAACAACCAGGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp TTCACCCCGAGGCGAGCCCCCGACCGGACGATGGCGCGGCACAAGTaGGCGTTCCCTTTCATGTATGCCAGGAGCAGCACCGTGCTGCCG +
Preference number: 2 (lower is better)
Translates to: FTPRRAPDRTMARHK*AFPFMYARSSTVLP
Trigger: CGGCAGCACGGTGCTGCTCCTGGCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp ACTCCCTGGTTGTTATTCACCCCGAGGCGAGCCCCCGACCGGACGATGGCGCGGCACCGTGCTGCCGTCTaGATCCGGCTTGTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: TPWLLFTPRRAPDRTMARHRAAV*IRLVQR
Trigger: CCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTG...CCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAATAACAACCAGGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGCAGCTGCTGGGGAGGTaGCCAAGGACGTGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWQLLGR*PRTWPG
Trigger: TCCAGGCCACGTCCTTGGTCACCTCCCCAGCAGCTG...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGCCAGCTTCCTACGCTaGGAGGCTCTGCCTCATCAG +
Preference number: 2 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAASFLR*EALPHQ
Trigger: CTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGC...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAACAGCAGAGTGACTaGGGACTCCACAGACAGGAC +
Preference number: 2 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGQQQSD*GLHRQD
Trigger: GTCCTGTCTGTGGAGTCCTCAGTCACTCTGCTGTTG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CAA 90 bp TGCAGGTTTGGGTTGGCGCCTTGCTGCAGGAGCTCTGCCGTGAGGTaGGCCAGGCCATGCCGACACGCTGTGTGCAACGGGGTTTCTCCC +
Preference number: 2 (lower is better)
Translates to: CRFGLAPCCRSSAVR*ARPCRHAVCNGVSP
Trigger: GGGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp TGGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTGGGTTGGCGCCTaGCTGCAGGAGCTCTGCCGTGAGGTTGGCCAGGCCATGCCGACA +
Preference number: 2 (lower is better)
Translates to: WQRQSFLRLQVWVGA*LQELCREVGQAMPT
Trigger: TGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp GCCTCCTTTGGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTGGGTaGGCGCCTTGCTGCAGGAGCTCTGCCGTGAGGTTGGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: ASFGRGRASSVCRFG*APCCRSSAVRLARP
Trigger: TGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp GCAGATGGACGCTGTCCGCCAAGCTGGTCAGGGATGCGGCCTCCTTaGGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTGGGTTGGCGC +
Preference number: 2 (lower is better)
Translates to: ADGRCPPSWSGMRPP*AEAELPPSAGLGWR
Trigger: GCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCCCTGACCAGCTTGGCGGACAGCGTCCATCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGCCCAGCTGCACTCCTaGCACCTCAGTAGCATGAAC +
Preference number: 2 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAAQLHS*HLSSMN
Trigger: GTTCATGCTACTGAGGTGTCAGGAGTGCAGCTGGGC...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCCTTGGAGATTCGTGTaGGCTGAGGTCCAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGPWRFV*AEVQSK
Trigger: CTTTGACTGGACCTCAGCTCACACGAATCTCCAAGG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTaGGACCAACAGCACTCGCAG +
Preference number: 2 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGQATQN*DQQHSQ
Trigger: CTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGGCCAGCTTCCTACGCTaGGAGGCTCTGCCTCATCAG +
Preference number: 2 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGASFLR*EALPHQ
Trigger: CTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGC...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGGAGATTCGTGTGAGCTaGGGTCCAGTCAAAGCTGAT +
Preference number: 2 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGEIRVS*GPVKAD
Trigger: ATCAGCTTTGACTGGACCTCAGCTCACACGAATCTC...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp ACTCCCTGGTTGTTATTCACCCCGAGGCGAGCCCCCGACCGGACGATGGCGCGGGAGCGCTCATGCTGCTaGAATCCTCCTTCCTCAGGT +
Preference number: 2 (lower is better)
Translates to: TPWLLFTPRRAPDRTMARERSCC*NPPSSG
Trigger: ACCTGAGGAAGGAGGATTTCAGCAGCATGAGCGCTC...CCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAATAACAACCAGGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp TCCACTGTGCACTCTGTCAGGAGAACCCGGATGTTGTTGAGCCGGCCGTGCATGGCAGGAGCTCTGCCGTaGGGTTGGCCAGGCCATGCC +
Preference number: 2 (lower is better)
Translates to: STVHSVRRTRMLLSRPCMAGALP*GWPGHA
Trigger: GGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGC...CATGCACGGCCGGCTCAACAACATCCGGGTTCTCCTGACAGAGTGCACAGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGGTGAGCAGAGCAGCTaGTGGGGAGGTGACCAAGGA +
Preference number: 2 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGGEQSS*WGGDQG
Trigger: TCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTCACC...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp GAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATACCCCGGCATGCGCTCTTGCTGTCCTaGCGCTGTATGGCCATGTGC +
Preference number: 2 (lower is better)
Translates to: EQHRAAVCIRLVQRIPRHALLLS*RCMAMC
Trigger: GCACATGGCCATACAGCGGCAGGACAGCAAGAGCGC...ATGCCGGGGTATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGGAGCAGAGCAGCTGCTaGGGAGGTGACCAAGGACGT +
Preference number: 2 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGEQSSC*GGDQGR
Trigger: ACGTCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTC...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CAA 90 bp GCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTaGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTG +
Preference number: 2 (lower is better)
Translates to: ARDFQSKVAHTWPGP*AGGPSWGRASYTEL
Trigger: CAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCCCAGCTGCACTCCTaGCACCTCAGTAGCATGAAC +
Preference number: 2 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWAQLHS*HLSSMN
Trigger: GTTCATGCTACTGAGGTGTCAGGAGTGCAGCTGGGC...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp TGGCCAGGCCATGCCGACACGCTGTGTGCAACGGGGTTTCTCCCCACTTGTTTCGGCTGCCGCGCTGGATaGGTCTGGCTGCAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: WPGHADTLCATGFLPTCFGCRAG*VWLQSC
Trigger: ACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCC...GAAACAAGTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGGTGAGCAGAGCAGCTaGTGGGGAGGTGACCAAGGA +
Preference number: 2 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSGEQSS*WGGDQG
Trigger: TCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTCACC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGTACGCTGAGAGGCTCTaGCTCATCAGTCAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWYAERL*LISQPR
Trigger: CCTGGGCTGACTGATGAGGCAGAGCCTCTCAGCGTA...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp AGCCCCCGACCGGACGATGGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATGCAGGTTGGCCAGGCCATaGCGACACGCTGTGTGCAAC +
Preference number: 2 (lower is better)
Translates to: SPRPDDGAAQVGVPFHVCRLARP*RHAVCN
Trigger: GTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCT...GCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp AGCCCCCGACCGGACGATGGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATGCCTCCAGCAGGAAGAGTaGGCTCTTGCTGTCCTGCCG +
Preference number: 2 (lower is better)
Translates to: SPRPDDGAAQVGVPFHVCLQQEE*ALAVLP
Trigger: CGGCAGGACAGCAAGAGCGCACTCTTCCTGCTGGAG...GCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp GAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATACCCCGGCATATTTCTGAGCCTGCTTaGACAGCGAGGTGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: EQHRAAVCIRLVQRIPRHISEPA*TARCRG
Trigger: CCCCCTGCACCTCGCTGTCCAAGCAGGCTCAGAAAT...ATGCCGGGGTATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp TGTATGCCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATGTGGGCAGGTCCTGCTaGGCAGCAAGATGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: CMPGAAPCCRLHPACPEDVGRSC*AARWRA
Trigger: TGCCCTCCATCTTGCTGCCCAGCAGGACCTGCCCAC...ATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp TGTATGCCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATGGAGGACTGAGCAGATaGTGGGCAGGTCCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: CMPGAAPCCRLHPACPEDGGLSR*WAGPAG
Trigger: CCCAGCAGGACCTGCCCACCATCTGCTCAGTCCTCC...ATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGAGCAAGACGAGAGAATaGGACGGCTGCTACGAGGTG +
Preference number: 2 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGSKTRE*DGCYEV
Trigger: CACCTCGTAGCAGCCGTCTCATTCTCTCGTCTTGCT...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGAGATGCCCTTGGGGCTaGAGCCTTGGTGACTCCCCC +
Preference number: 2 (lower is better)
Translates to: GRASYTELGPTALAASLGRCPWG*SLGDSP
Trigger: GGGGGAGTCACCAAGGCTTCAGCCCCAAGGGCATCT...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGATCGTTCCAGTCTATTaGCGCAGGAAGACACCCGCC +
Preference number: 2 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGIVPVY*RRKTPA
Trigger: GGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGAT...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp CACCACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTGGCGTCTGCAGATGGGGTTGGCGCCTTGCTaGAGGAGCTCTGCCGTGAGG +
Preference number: 2 (lower is better)
Translates to: HHIRMVIGDRHVQWRLQMGLAPC*RSSAVR
Trigger: CCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCC...CATCTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACAGGAGCAGCACCGTGCTaGCGTCTGCATCCGGCTTGT +
Preference number: 2 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTGAAPC*RLHPAC
Trigger: ACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCC...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTCAGCTGCTGGGGAGGTaGCCAAGGACGTGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRQLLGR*PRTWPG
Trigger: TCCAGGCCACGTCCTTGGTCACCTCCCCAGCAGCTG...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGTCTCCAACAGCAGAGTaGCTGAGGACTCCACAGACA +
Preference number: 2 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGSPTAE*LRTPQT
Trigger: TGTCTGTGGAGTCCTCAGTCACTCTGCTGTTGGAGA...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCATTTGTACGCAAGTGTTaGCAGCAGGGAGAGCACGGG +
Preference number: 2 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAFVRKC*QQGEHG
Trigger: CCCGTGCTCTCCCTGCTGTCAACACTTGCGTACAAA...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
3UTR-3UTR TCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACACCGACATGGTGTCATTaGTGGCGGCTCCAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTPTWCH*WRLQSP
Trigger: TGGGCTCTGGAGCCGCCATCAATGACACCATGTCGG...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp CGCCATGTGCAGTGGCGTCTGCAGATGGACGCTGTCCGCCAAGCTGGTCAGGGAGGCATTCAGCTCCTCTaGCGTCTGGTAGAAGCGAAT +
Preference number: 2 (lower is better)
Translates to: RHVQWRLQMDAVRQAGQGGIQLL*RLVEAN
Trigger: ATTCGCTTCTACCAGACGGCAGAGGAGCTGAATGCC...TCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTGCACATGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp TGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGTGCGTTCTGCCGACACGCTGTGTaGAACGGGGTTTCTCCCCAC +
Preference number: 2 (lower is better)
Translates to: WLLMATWMGVLPSASCAFCRHAV*NGVSPH
Trigger: GTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCA...GAACGCACAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp TGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGTGCGTTCTTTGGGTTGGCGCCTTaGTGCAGGAGCTCTGCCGTG +
Preference number: 2 (lower is better)
Translates to: WLLMATWMGVLPSASCAFFGLAP*CRSSAV
Trigger: CACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAA...GAACGCACAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCAAGCTACACAGAACTaGGACCAACAGCACTCGCAG +
Preference number: 2 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGQATQN*DQQHSQ
Trigger: CTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTG...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAGCCAGCTTCCTACGCTaGGAGGCTCTGCCTCATCAG +
Preference number: 2 (lower is better)
Translates to: SWGRASYTELGPTALAASASFLR*EALPHQ
Trigger: CTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGC...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTAGATGCCCTTGGGGCTaGAGCCTTGGTGACTCCCCC +
Preference number: 2 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRRCPWG*SLGDSP
Trigger: GGGGGAGTCACCAAGGCTTCAGCCCCAAGGGCATCT...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp AGCCCCCGACCGGACGATGGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATGCTCCACATCAGCTTTGTaGCTAACCAGCGTGGTGGCA +
Preference number: 2 (lower is better)
Translates to: SPRPDDGAAQVGVPFHVCSTSAL*LTSVVA
Trigger: TGCCACCACGCTGGTTAGTCACAAAGCTGATGTGGA...GCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp ACTCCCTGGTTGTTATTCACCCCGAGGCGAGCCCCCGACCGGACGATGGCGCGGCAAAATGTGCAGTGGTaGCTGGCCTCTGAGATTAAA +
Preference number: 2 (lower is better)
Translates to: TPWLLFTPRRAPDRTMARQNVQW*LASEIK
Trigger: TTTAATCTCAGAGGCCAGTCACCACTGCACATTTTG...CCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAATAACAACCAGGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp GATGCGGCCTCCTTTGGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTGGGTTGTACAAGGCCACAAGGTaGAGTGGTGTCTCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: DAASFGRGRASSVCRFGLYKATR*SGVSWA
Trigger: TGCCCAGGAGACACCACTGCACCTTGTGGCCTTGTA...CAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp TGGCCAGGCCATGCCGACACGCTGTGTGCAACGGGGTTTCTCCCCACTTGTTTCTGCCAGGAAAAGAGCTaGTGCCTCGTTTCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: WPGHADTLCATGFLPTCFCQEKS*CLVSCS
Trigger: GGAGCAGGAAACGAGGCAGCAGCTCTTTTCCTGGCA...GAAACAAGTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp GTTCTCGGCAAAGCGGCCCATACTGAGGCACACCATGAGGGCAGTAGCTCATCTAGGATGGCACAGGCCTaGCAGGCTGCCTGGAAACTG +
Preference number: 2 (lower is better)
Translates to: VLGKAAHTEAHHEGSSSSRMAQA*QAAWKL
Trigger: CAGTTTCCAGGCAGCCTGCCAGGCCTGTGCCATCCT...AGATGAGCTACTGCCCTCATGGTGTGCCTCAGTATGGGCCGCTTTGCCGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
3UTR-3UTR CCA 90 bp GTTCTCGGCAAAGCGGCCCATACTGAGGCACACCATGAGGGCAGTAGCTCATCTGGAAGTCAGGAAGGATaGCACAGGCCTGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: VLGKAAHTEAHHEGSSSSGSQEG*HRPGRL
Trigger: CAGCCTGCCAGGCCTGTGCCATCCTTCCTGACTTCC...AGATGAGCTACTGCCCTCATGGTGTGCCTCAGTATGGGCCGCTTTGCCGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
3UTR-3UTR CCA 90 bp TGCCGCTGTATGGCCATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGGTGTGGCTGCCGCGCTaGATGAGTCTGGCTGCAAAG +
Preference number: 2 (lower is better)
Translates to: CRCMAMCSSVCPSDMVSLVWLPR*MSLAAK
Trigger: CTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACAC...CAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp TGCCGCTGTATGGCCATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGGGATGCGGCCTCCTTTaGCAGAGGCAGAGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: CRCMAMCSSVCPSDMVSLGCGLL*QRQSFL
Trigger: GAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCC...CAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp TGCCGCTGTATGGCCATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGAGTGGCGTCTGCAGATaGACGCTGTCCGCCAAGCTG +
Preference number: 2 (lower is better)
Translates to: CRCMAMCSSVCPSDMVSLSGVCR*TLSAKL
Trigger: CAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACT...CAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp GACACATGTAAAGGAGTCCTCCCCTTGCTGTCCTGCATGTTGGGGTaGGCACCAGCCTGCAGAAGGGCCTCTGCAATCTGCGCCATCTCA +
Preference number: 2 (lower is better)
Translates to: DTCKGVLPLLSCMLG*APACRRASAICAIS
Trigger: TGAGATGGCGCAGATTGCAGAGGCCCTTCTGCAGGCTGGTGCCAACCCCAACATGCAGGACAGCAAGGGGAGGACTCCTTTACATGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAAGGTCCAGTCAAAGCTaGTCATTAGAATCACTGATG +
Preference number: 2 (lower is better)
Translates to: VRWRTRGQGPWLVALHGARSSQS*SLESLM
Trigger: CATCAGTGATTCTAATGATCAGCTTTGACTGGACCT...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGAGATTCGTGTGAGCTaGGGTCCAGTCAAAGCTGAT +
Preference number: 2 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSEIRVS*GPVKAD
Trigger: ATCAGCTTTGACTGGACCTCAGCTCACACGAATCTC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp TCCACTGTGCACTCTGTCAGGAGAACCCGGATGTTGTTGAGCCGGCCGTGCATGGGTCAGAAGACACTGTaGTATGCTGCACTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: STVHSVRRTRMLLSRPCMGQKTL*YAALPA
Trigger: GGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACC...CATGCACGGCCGGCTCAACAACATCCGGGTTCTCCTGACAGAGTGCACAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCGGTGAGCAGAGCAGCTaGTGGGGAGGTGACCAAGGA +
Preference number: 2 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASGEQSS*WGGDQG
Trigger: TCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTCACC...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGGGAAGACTTCATGAATaGTCTGGGATGGACACCAAG +
Preference number: 2 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGGRLHE*SGMDTK
Trigger: CTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp TCCACTGTGCACTCTGTCAGGAGAACCCGGATGTTGTTGAGCCGGCCGTGCATGAAGGAGTCCTCCCCTTaGTGTCCTGCATGTTGGGGT +
Preference number: 2 (lower is better)
Translates to: STVHSVRRTRMLLSRPCMKESSP*CPACWG
Trigger: ACCCCAACATGCAGGACAGCAAGGGGAGGACTCCTT...CATGCACGGCCGGCTCAACAACATCCGGGTTCTCCTGACAGAGTGCACAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp ACCGTGTTGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGGACACTGTGATATGCTaGACTGCCAGCCACAGAGCC +
Preference number: 2 (lower is better)
Translates to: TVLAADGHVDGGSSFCILDTVIC*TASHRA
Trigger: GGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTC...CAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCAACACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp AGACACCACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTGGCGTCTGCAGAGAGCTTCCTCCGTCTaGAGGTTTGGGTTGGCGCCT +
Preference number: 2 (lower is better)
Translates to: RHHIRMVIGDRHVQWRLQRASSV*RFGLAP
Trigger: AGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCT...CTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp AGCCCCCGACCGGACGATGGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATGCTTTATATCTGCCTGGTaGTCCAGCAGGAAGAGTGCG +
Preference number: 2 (lower is better)
Translates to: SPRPDDGAAQVGVPFHVCFISAW*SSRKSA
Trigger: CGCACTCTTCCTGCTGGAGCACCAGGCAGATATAAA...GCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp TGTATGCCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATGTCCTCCAGATTGTTTaGCAATGCAAGCCACAGCGG +
Preference number: 2 (lower is better)
Translates to: CMPGAAPCCRLHPACPEDVLQIV*QCKPQR
Trigger: CCGCTGTGGCTTGCATTGGCAAACAATCTGGAGGAC...ATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp GATGCGGCCTCCTTTGGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTGGGTTGAGTTCATCAGTGTGCTaGCATTCAGCTCCTCTGCCG +
Preference number: 2 (lower is better)
Translates to: DAASFGRGRASSVCRFGLSSSVC*HSAPLP
Trigger: CGGCAGAGGAGCTGAATGCCAGCACACTGATGAACT...CAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp TGTATGCCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATCCTGTGCGTTCACGTTaGCACCAAACTCCAGAAGAC +
Preference number: 2 (lower is better)
Translates to: CMPGAAPCCRLHPACPEDPVRSR*HQTPED
Trigger: GTCTTCTGGAGTTTGGTGCCAACGTGAACGCACAGG...ATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp TGCTCAGCAGCCCCGGACTCTCGTTTGAGAATGGCCTCGGCTGACTaGTTGTTCTTGAAAGTCATGGCACAGGCAAACGGGGTCAGCCCT +
Preference number: 2 (lower is better)
Translates to: CSAAPDSRLRMASAD*LFLKVMAQANGVSP
Trigger: AGGGCTGACCCCGTTTGCCTGTGCCATGACTTTCAAGAACAACAAGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGGCTGCTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp TTCCTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGCAGCTGCTGGGGAGGTaGCCAAGGACGTGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: FLVPATVTWEVSVSLPFRQLLGR*PRTWPG
Trigger: TCCAGGCCACGTCCTTGGTCACCTCCCCAGCAGCTG...CCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR TCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACAACAGCAGAGTGACTaGGGACTCCACAGACAGGAC +
Preference number: 2 (lower is better)
Translates to: SWGRASYTELGPTALAASQQQSD*GLHRQD
Trigger: GTCCTGTCTGTGGAGTCCTCAGTCACTCTGCTGTTG...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGGCTGAAGCCTTGGTaGCTCCCCCTCTCATCACTT +
Preference number: 2 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRGLKPW*LPLSSL
Trigger: AAGTGATGAGAGGGGGAGTCACCAAGGCTTCAGCCC...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp GGTGCGTCTGTGTGGCTGCCGCGCTGGATGAGTCTGGCTGCAAAGCTGTTCTCAGCCAGATCTCCGTTATaGTCCGCTTCATTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: GASVWLPRWMSLAAKLFSARSPL*SASFSF
Trigger: GAAGCTGAATGAAGCGGATCATAACGGAGATCTGGC...TGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGGAAGACTTCATGAATaGTCTGGGATGGACACCAAG +
Preference number: 2 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSGRLHE*SGMDTK
Trigger: CTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGTCAAGCGGCCCAGCTaGACTCCTGACACCTCAGTA +
Preference number: 2 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRVKRPS*TPDTSV
Trigger: TACTGAGGTGTCAGGAGTGCAGCTGGGCCGCTTGAC...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp AGTTCTGAACTGCCACATGAAGGAAATTCCGGCCCTTGTTATCCACCTGCTCAGTGTCGCCGTGTCAGGTaGGTCTGTGTGGCTGCCGCG +
Preference number: 2 (lower is better)
Translates to: SSELPHEGNSGPCYPPAQCRRVR*VCVAAA
Trigger: CGCGGCAGCCACACAGACGCACCTGACACGGCGACA...CTGAGCAGGTGGATAACAAGGGCCGGAATTTCCTTCATGTGGCAGTTCAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp TGTATGCCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATTGTCAGCTCCTCGGGTaGATATGGCATCAACTACGA +
Preference number: 2 (lower is better)
Translates to: CMPGAAPCCRLHPACPEDCQLLG*IWHQLR
Trigger: TCGTAGTTGATGCCATATGCACCCGAGGAGCTGACA...ATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGGAGCAGAGCAGCTGCTaGGGAGGTGACCAAGGACGT +
Preference number: 2 (lower is better)
Translates to: GRISARSICVKDIGPAGLEQSSC*GGDQGR
Trigger: ACGTCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTC...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAGAGCAGAGCAGCTGCTaGGGAGGTGACCAAGGACGT +
Preference number: 2 (lower is better)
Translates to: SKASSLSSQLPTLRGSASEQSSC*GGDQGR
Trigger: ACGTCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTC...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGTACTGGAAGGGGAAATaGTTTTCCAAGTGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGYWKGK*FSKCPC
Trigger: ACAGGGACACTTGGAAAACCATTTCCCCTTCCAGTA...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCATGAATGCTCTGGGATaGACACCAAGCTACTGGAAG +
Preference number: 2 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSMNALG*TPSYWK
Trigger: CTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCAT...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CAA 90 bp GCCCCGGACTCTCGTTTGAGAATGGCCTCGGCTGACTTGTTGTTCTaGAAAGTCATGGCACAGGCAAACGGGGTCAGCCCTTGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: APDSRLRMASADLLF*KVMAQANGVSPCLS
Trigger: AGACAGACAAGGGCTGACCCCGTTTGCCTGTGCCATGACTTTCAAGAACAACAAGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp TCAGCAGCCCCGGACTCTCGTTTGAGAATGGCCTCGGCTGACTTGTaGTTCTTGAAAGTCATGGCACAGGCAAACGGGGTCAGCCCTTGT +
Preference number: 2 (lower is better)
Translates to: SAAPDSRLRMASADL*FLKVMAQANGVSPC
Trigger: ACAAGGGCTGACCCCGTTTGCCTGTGCCATGACTTTCAAGAACAACAAGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGGCTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp TTCATGTATGCCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGGCTaGTCCAGAGGATACCCCGGCATGCATTCTAGGAAGAGATCAAAG +
Preference number: 2 (lower is better)
Translates to: FMYARSSTVLPSASG*SRGYPGMHSRKRSK
Trigger: CTTTGATCTCTTCCTAGAATGCATGCCGGGGTATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGAGGTCCAGTCAAAGCTaGTCATTAGAATCACTGATG +
Preference number: 2 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGRSSQS*SLESLM
Trigger: CATCAGTGATTCTAATGATCAGCTTTGACTGGACCT...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCGGTGAGCAGAGCAGCTaGTGGGGAGGTGACCAAGGA +
Preference number: 2 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRGEQSS*WGGDQG
Trigger: TCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTCACC...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp AGTTCTGAACTGCCACATGAAGGAAATTCCGGCCCTTGTTATCCACCTGCTCAGGCCCAGCAGCTGGGCTaGGATCGTGTGCATGCCAGT +
Preference number: 2 (lower is better)
Translates to: SSELPHEGNSGPCYPPAQAQQLG*DRVHAS
Trigger: ACTGGCATGCACACGATCGCAGCCCAGCTGCTGGGC...CTGAGCAGGTGGATAACAAGGGCCGGAATTTCCTTCATGTGGCAGTTCAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACAAAATGCAAAGGGGTCTaGCCATCTCTAGCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTKCKGV*PSLASS
Trigger: GGAAGAGGCTAGAGATGGGCAGACCCCTTTGCATTT...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCATACTGGAAGGGGAAATaGTTTTCCAAGTGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAYWKGK*FSKCPC
Trigger: ACAGGGACACTTGGAAAACCATTTCCCCTTCCAGTA...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
3UTR-3UTR CCA 90 bp AGCCCCCGACCGGACGATGGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATGCACATTTATATCTGCCTaGTGCTCCAGCAGGAAGAGT +
Preference number: 2 (lower is better)
Translates to: SPRPDDGAAQVGVPFHVCTFISA*CSSRKS
Trigger: ACTCTTCCTGCTGGAGCACCAGGCAGATATAAATGT...GCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp CTGCCCATCTCTAGCCTCTTCCTCTCCTTCTCCATTGGCGCCTGGTaGTCTGGGACTGTTCACGTCACAGCCACTGCGAATAAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: LPISSLFLSFSIGAW*SGTVHVTATANKKA
Trigger: TGCTTTCTTATTCGCAGTGGCTGTGACGTGAACAGTCCCAGACAACCAGGCGCCAATGGAGAAGGAGAGGAAGAGGCTAGAGATGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp TTCCGGCCCTTGTTATCCACCTGCTCAGCAGCCCCGGACTCTCGTTaGAGAATGGCCTCGGCTGACTTGTTGTTCTTGAAAGTCATGGCA +
Preference number: 2 (lower is better)
Translates to: FRPLLSTCSAAPDSR*RMASADLLFLKVMA
Trigger: TGCCATGACTTTCAAGAACAACAAGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGGCTGCTGAGCAGGTGGATAACAAGGGCCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGATCACTTGGCCTGTATaGATCTCTTGCTCTAAAAGA +
Preference number: 2 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWITWPV*ISCSKR
Trigger: TCTTTTAGAGCAAGAGATTCATACAGGCCAAGTGAT...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp CTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGGTGGGGCTGAAGCCTTGGTaGCTCCCCCTCTCATCACTT +
Preference number: 2 (lower is better)
Translates to: LVPATVTWEVSVSLPFRVGLKPW*LPLSSL
Trigger: AAGTGATGAGAGGGGGAGTCACCAAGGCTTCAGCCC...CACCCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR TCA 90 bp AAACCTAGATGGAGGTCAAGCTCTCCCCTTTCCCAAGACGTTCCCTCCACTCCGAATGACTCGGGGCTCTaGGGTAGAGGACTAAAGGTC +
Preference number: 2 (lower is better)
Translates to: KPRWRSSSPLSQDVPSTPNDSGL*GRGLKV
Trigger: GACCTTTAGTCCTCTACCTCAGAGCCCCGAGTCATT...CGGAGTGGAGGGAACGTCTTGGGAAAGGGGAGAGCTTGACCTCCATCTAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR TCA 90 bp AGACACCACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTGGCGTCTGCAGACTTGTTTCTGTGGTTaGCATGGGCACCGTTGGTTG +
Preference number: 2 (lower is better)
Translates to: RHHIRMVIGDRHVQWRLQTCFCG*HGHRWL
Trigger: CAACCAACGGTGCCCATGTCAACCACAGAAACAAGT...CTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp AGTTCTGAACTGCCACATGAAGGAAATTCCGGCCCTTGTTATCCACCTGCTCAGCCCCGGACTCTCGTTTaGGAATGGCCTCGGCTGACT +
Preference number: 2 (lower is better)
Translates to: SSELPHEGNSGPCYPPAQPRTLV*EWPRLT
Trigger: AGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGG...CTGAGCAGGTGGATAACAAGGGCCGGAATTTCCTTCATGTGGCAGTTCAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp TGCCGCTGTATGGCCATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGAGAGCATTGGCTTTCTaGTCCAGGATGACAGACACC +
Preference number: 2 (lower is better)
Translates to: CRCMAMCSSVCPSDMVSLRALAF*SRMTDT
Trigger: GGTGTCTGTCATCCTGGAGCAGAAAGCCAATGCTCT...CAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACAAGGGCAGTCTGGCGATaGTTGGTTAATTCGTTCACT +
Preference number: 2 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTRAVWR*LVNSFT
Trigger: AGTGAACGAATTAACCAAGCATCGCCAGACTGCCCT...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACAAGCTTCCCAGGGAGCTaGGAATCCATTTCAATCAGA +
Preference number: 2 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTSFPGS*ESISIR
Trigger: TCTGATTGAAATGGATTCCCAGCTCCCTGGGAAGCT...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp GGCCAGGCCATGCCGACACGCTGTGTGCAACGGGGTTTCTCCCCACTTGTTTCTAAGGGGTTCACAGACTaGTCAGAAGACACTGTGATA +
Preference number: 2 (lower is better)
Translates to: GQAMPTRCVQRGFSPLVSKGFTD*SEDTVI
Trigger: TATCACAGTGTCTTCTGACCAGTCTGTGAACCCCTT...AGAAACAAGTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp ATGGATATCGGGGTGAGAAACCAACAGCTGAATGATGACACCGTGTaGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATC +
Preference number: 2 (lower is better)
Translates to: MDIGVRNQQLNDDTV*AADGHVDGGSSFCI
Trigger: GATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCAACACGGTGTCATCATTCAGCTGTTGGTTTCTCACCCCGATATCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGCCTTGGAGATTCGTGTaGGCTGAGGTCCAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: GRISARSICVKDIGPAGLPWRFV*AEVQSK
Trigger: CTTTGACTGGACCTCAGCTCACACGAATCTCCAAGG...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCATCACTTGGCCTGTATaGATCTCTTGCTCTAAAAGA +
Preference number: 2 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSITWPV*ISCSKR
Trigger: TCTTTTAGAGCAAGAGATTCATACAGGCCAAGTGAT...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp ATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGATGGCGGCTCCAGAGCTGAGGAGCTGTAGCTaGAACCGATTTGCTAGTTTC +
Preference number: 2 (lower is better)
Translates to: MCSSVCPSDMVSLMAAPELRSCS*NRFASF
Trigger: GAAACTAGCAAATCGGTTTCAGCTACAGCTCCTCAG...CTCTGGAGCCGCCATCAATGACACCATGTCGGATGGGCAGACGCTACTGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACACTCAGGTCGTCCCAATaGCTTGCAATAATTTCTGCA +
Preference number: 2 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTLRSSQ*LAIISA
Trigger: TGCAGAAATTATTGCAAGTCATTGGGACGACCTGAG...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp TGCCGCTGTATGGCCATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGGCTGTTCTCATCAAATaGAGTCCCATTTACCACGGG +
Preference number: 2 (lower is better)
Translates to: CRCMAMCSSVCPSDMVSLAVLIK*SPIYHG
Trigger: CCCGTGGTAAATGGGACTTCATTTGATGAGAACAGC...CAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp ACCGTGTTGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGCTGGATGAGTCTGGCTaGAAAGCTGTTCTCATCAAA +
Preference number: 2 (lower is better)
Translates to: TVLAADGHVDGGSSFCILLDESG*KAVLIK
Trigger: TTTGATGAGAACAGCTTTGCAGCCAGACTCATCCAG...CAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCAACACGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACACCGCTGCATTCTCCTTaGCATATTGTCCCAAAATGT +
Preference number: 2 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTPLHSP*HIVPKC
Trigger: ACATTTTGGGACAATATGGCAAGGAGAATGCAGCGG...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp TTGGCGCCTGGTTGTCTGGGACTGTTCACGTCACAGCCACTGCGAATAAGAAAGGTTCCCCTTCTCATCTaGCACAGACATGTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LAPGCLGLFTSQPLRIRKVPLLI*HRHVSS
Trigger: GGAGCTGACATGTCTGTGCCAGATGAGAAGGGGAAC...CTTTCTTATTCGCAGTGGCTGTGACGTGAACAGTCCCAGACAACCAGGCGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp CTGCAATCTGCGCCATCTCAGACATCACATCTGCTGAGTGTTTCTTaGAACTGTACAAGGCCACAAGGTGCAGTGGTGTCTCCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: LQSAPSQTSHLLSVS*NCTRPQGAVVSPGH
Trigger: GTGCCCAGGAGACACCACTGCACCTTGTGGCCTTGTACAGTTCAAAGAAACACTCAGCAGATGTGATGTCTGAGATGGCGCAGATTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp CGGCCCTTGTTATCCACCTGCTCAGCAGCCCCGGACTCTCGTTTGAGAATGGCCATTTTGTATAACAACTaGGCGCTCATGCTGCTGAAA +
Preference number: 2 (lower is better)
Translates to: RPLLSTCSAAPDSRLRMAILYNN*ALMLLK
Trigger: TTTCAGCAGCATGAGCGCTCAGTTGTTATACAAAAT...GGCCATTCTCAAACGAGAGTCCGGGGCTGCTGAGCAGGTGGATAACAAGGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCCAGCTCTATAAAAAGTaGAGCACAGTAAAAGTGCAT +
Preference number: 2 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSQLYKK*STVKVH
Trigger: ATGCACTTTTACTGTGCTGCACTTTTTATAGAGCTG...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGTCTTGCTCTAAAAGATaGTCTGTAGAGTTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGSCSKR*SVEFFL
Trigger: AAGGAAAAACTCTACAGAGCATCTTTTAGAGCAAGA...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGTCTTGCTCTAAAAGATaGTCTGTAGAGTTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWSCSKR*SVEFFL
Trigger: AAGGAAAAACTCTACAGAGCATCTTTTAGAGCAAGA...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp GGCATGGTGGCTCACGCCTATCTATCTCATTTTAATGGGAACAGCCCCTTAGTTACAGGCCTGGCAGGCTaGCTGGAAACTGTGCACCTT +
Preference number: 2 (lower is better)
Translates to: GMVAHAYLSHFNGNSPLVTGLAG*LETVHL
Trigger: AAGGTGCACAGTTTCCAGGCAGCCTGCCAGGCCTGT...AACTAAGGGGCTGTTCCCATTAAAATGAGATAGATAGGCGTGAGCCACCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575298.1
3UTR-3UTR GCA 90 bp GAAGTCCGGAATGATCTGCAAGTTGTTGGTGGCATGAAGAGCATTGGCTTTCTGCTCCCCTTGCTGTCCTaGATGTTGGGGTTGGCACCA +
Preference number: 2 (lower is better)
Translates to: EVRNDLQVVGGMKSIGFLLPLLS*MLGLAP
Trigger: TGGTGCCAACCCCAACATGCAGGACAGCAAGGGGAG...CAGAAAGCCAATGCTCTTCATGCCACCAACAACTTGCAGATCATTCCGGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp TTGGCGCCTGGTTGTCTGGGACTGTTCACGTCACAGCCACTGCGAATAAGAAAGGAAGACACTGTGATATaGTGCACTGCCAGCCACAGA +
Preference number: 2 (lower is better)
Translates to: LAPGCLGLFTSQPLRIRKEDTVI*CTASHR
Trigger: TCTGTGGCTGGCAGTGCAGCATATCACAGTGTCTTC...CTTTCTTATTCGCAGTGGCTGTGACGTGAACAGTCCCAGACAACCAGGCGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp TGTTCCTCAGTAGGATCCTTGGGTGTGCTCATCTCATCCCTCCATTaGGTCAAGGTTTGCCCATCAATGTGCAGGACCCAGGCAAGTTCA +
Preference number: 2 (lower is better)
Translates to: CSSVGSLGVLISSLH*VKVCPSMCRTQASS
Trigger: TGAACTTGCCTGGGTCCTGCACATTGATGGGCAAACCTTGACCAAATGGAGGGATGAGATGAGCACACCCAAGGATCCTACTGAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
3UTR-3UTR TCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAAGGTCCAGTCAAAGCTaGTCATTAGAATCACTGATG +
Preference number: 2 (lower is better)
Translates to: SWGRASYTELGPTALAASRSSQS*SLESLM
Trigger: CATCAGTGATTCTAATGATCAGCTTTGACTGGACCT...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp AAACCTAGATGGAGGTCAAGCTCTCCCCTTTCCCAAGACGTTCCCTCCACTCCGATAGAAAATGGAAACTaGCCACATGCCTCACATGGC +
Preference number: 2 (lower is better)
Translates to: KPRWRSSSPLSQDVPSTPIENGN*PHASHG
Trigger: GCCATGTGAGGCATGTGGTCAGTTTCCATTTTCTAT...CGGAGTGGAGGGAACGTCTTGGGAAAGGGGAGAGCTTGACCTCCATCTAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR TCA 90 bp TTCCTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGCACATGGATGCGCCCTaGAGCCAATGGAAAACAGGA +
Preference number: 2 (lower is better)
Translates to: FLVPATVTWEVSVSLPFRHMDAP*SQWKTG
Trigger: TCCTGTTTTCCATTGGCTTCAGGGCGCATCCATGTG...CCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAGGAAGACTTCATGAATaGTCTGGGATGGACACCAAG +
Preference number: 2 (lower is better)
Translates to: SKASSLSSQLPTLRGSASGRLHE*SGMDTK
Trigger: CTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp CTGCCTTCCCTACATCTCTGTTCCTCAGTAGGATCCTTGGGTGTGCTCATCTCAGTTTGCCCATCAATGTaGAGGACCCAGGCAAGTTCA +
Preference number: 2 (lower is better)
Translates to: LPSLHLCSSVGSLGVLISVCPSM*RTQASS
Trigger: TGAACTTGCCTGGGTCCTGCACATTGATGGGCAAAC...TGAGATGAGCACACCCAAGGATCCTACTGAGGAACAGAGATGTAGGGAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
3UTR-3UTR CCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTTACTGGAAGGGGAAATaGTTTTCCAAGTGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRYWKGK*FSKCPC
Trigger: ACAGGGACACTTGGAAAACCATTTCCCCTTCCAGTA...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCTATGGATTTTTAAATTaGAATCACCGACAATGCAGC +
Preference number: 2 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSYGFLN*NHRQCS
Trigger: GCTGCATTGTCGGTGATTCCAATTTAAAAATCCATA...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp TTGGCGCCTGGTTGTCTGGGACTGTTCACGTCACAGCCACTGCGAATAAGAAAGCGTTGTTTTCATCAATaGCTCTGTGCAGGAGCGTCT +
Preference number: 2 (lower is better)
Translates to: LAPGCLGLFTSQPLRIRKRCFHQ*LCAGAS
Trigger: AGACGCTCCTGCACAGAGCCATTGATGAAAACAACG...CTTTCTTATTCGCAGTGGCTGTGACGTGAACAGTCCCAGACAACCAGGCGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp GATGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAACCTCTCCTTCTCCATTaGCGCCTGGTTGTCTGGGAC +
Preference number: 2 (lower is better)
Translates to: DAWLIRSLWLPQEANCGQPLLLH*RLVVWD
Trigger: GTCCCAGACAACCAGGCGCCAATGGAGAAGGAGAGG...TTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp GGCATGCATTCTAGGAAGAGATCAAAGATGGCCGCTGCATTCTCCTaGCCATATTGTCCCAAAATGTGCAGTGGTGACTGGCCTCTGAGA +
Preference number: 2 (lower is better)
Translates to: GMHSRKRSKMAAAFS*PYCPKMCSGDWPLR
Trigger: TCTCAGAGGCCAGTCACCACTGCACATTTTGGGACAATATGGCAAGGAGAATGCAGCGGCCATCTTTGATCTCTTCCTAGAATGCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGCAGCTCTATAAAAAGTaGAGCACAGTAAAAGTGCAT +
Preference number: 2 (lower is better)
Translates to: GRASYTELGPTALAASLGQLYKK*STVKVH
Trigger: ATGCACTTTTACTGTGCTGCACTTTTTATAGAGCTG...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp GTTTCTCCCCACTTGTTTCTGTGGTTGACATGGGCACCGTTGGTTGCCAGGAAAAGTAGTTCATCAGTGTaGTGGCATTCAGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: VSPHLFLWLTWAPLVARKSSSSV*WHSAPL
Trigger: CAGAGGAGCTGAATGCCAGCACACTGATGAACTACT...TTTCCTGGCAACCAACGGTGCCCATGTCAACCACAGAAACAAGTGGGGAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp TCAGCCCTTGTCTGTCTCGTACATTCAAATGGATATCGGGGTGAGAAACCAACACTGCAGAAGGGCCTCTaGAATCTGCGCCATCTCAGA +
Preference number: 2 (lower is better)
Translates to: SALVCLVHSNGYRGEKPTLQKGL*NLRHLR
Trigger: TCTGAGATGGCGCAGATTGCAGAGGCCCTTCTGCAG...TGTTGGTTTCTCACCCCGATATCCATTTGAATGTACGAGACAGACAAGGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp GATGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAATGTGATATGCTGCACTaGCAGCCACAGAGCCGTGCT +
Preference number: 2 (lower is better)
Translates to: DAWLIRSLWLPQEANCGQCDMLH*QPQSRA
Trigger: AGCACGGCTCTGTGGCTGGCAGTGCAGCATATCACA...TTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp GATGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAATGGGCTGCGATCGTGTaGATGCCAGTCCATAATGCC +
Preference number: 2 (lower is better)
Translates to: DAWLIRSLWLPQEANCGQWAAIV*MPVHNA
Trigger: GGCATTATGGACTGGCATGCACACGATCGCAGCCCA...TTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp AACATTCTGTATGAAATATGTCAGACTGGGGGACGGGGGATCTCTTCTAATTCAGCTGGTGGCCCTTCATaGGGCAGGGCAAGCTACACA +
Preference number: 2 (lower is better)
Translates to: NILYEICQTGGRGISSNSAGGPS*GRASYT
Trigger: TGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGC...TGAATTAGAAGAGATCCCCCGTCCCCCAGTCTGACATATTTCATACAGAATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp ATTGCTATCCCTGGACTCAGGCTTAGAAGCAAGTTTGAATCAACATATTTGAAAGCCAGGGCCCTTGGCTaGTGGCCCTTCATGGGGCAG +
Preference number: 2 (lower is better)
Translates to: IAIPGLRLRSKFESTYLKARALG*WPFMGQ
Trigger: CTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGC...TTTCAAATATGTTGATTCAAACTTGCTTCTAAGCCTGAGTCCAGGGATAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp ACCGTGTTGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGAAGAGATCTCCTCTTTaGATTCCTTTGTGTAACAAG +
Preference number: 2 (lower is better)
Translates to: TVLAADGHVDGGSSFCILKRSPL*IPLCNK
Trigger: CTTGTTACACAAAGGAATCCAAAGAGGAGATCTCTT...CAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCAACACGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp GAAGTCCGGAATGATCTGCAAGTTGTTGGTGGCATGAAGAGCATTGGCTTTCTGTTTCTGTGGTTGACATaGGCACCGTTGGTTGCCAGG +
Preference number: 2 (lower is better)
Translates to: EVRNDLQVVGGMKSIGFLFLWLT*APLVAR
Trigger: CCTGGCAACCAACGGTGCCCATGTCAACCACAGAAA...CAGAAAGCCAATGCTCTTCATGCCACCAACAACTTGCAGATCATTCCGGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp GATGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAAAGGCCCAGCACAGTCTaGTCTCGGGAATCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: DAWLIRSLWLPQEANCGQRPSTV*SRESLR
Trigger: CCTCAAAGATTCCCGAGACCAGACTGTGCTGGGCCT...TTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp CAATACAGAGGACACACTATCCAGAAAAGAATGAACAAAGAACAGGCTGTTGCAGCCAGCTTCCTACGCTaGGAGGCTCTGCCTCATCAG +
Preference number: 2 (lower is better)
Translates to: QYRGHTIQKRMNKEQAVAASFLR*EALPHQ
Trigger: CTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGC...TGCAACAGCCTGTTCTTTGTTCATTCTTTTCTGGATAGTGTGTCCTCTGTATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp GGGACCCATTCAGGGACAAGAGTGAGGACACAGAACGGGGTGGTCAGAAATGACCTATCCAGAAAAGAATaGACAAAGAACAGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: GTHSGTRVRTQNGVVRNDLSRKE*TKNRLL
Trigger: CAACAGCCTGTTCTTTGTTCATTCTTTTCTGGATAG...GTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR GCA 90 bp AACATTCTGTATGAAATATGTCAGACTGGGGGACGGGGGATCTCTTCTAATTCATACGCTGAGAGGCTCTaGCTCATCAGTCAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: NILYEICQTGGRGISSNSYAERL*LISQPR
Trigger: CCTGGGCTGACTGATGAGGCAGAGCCTCTCAGCGTA...TGAATTAGAAGAGATCCCCCGTCCCCCAGTCTGACATATTTCATACAGAATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACAGCTCTATAAAAAGTaGAGCACAGTAAAAGTGCAT +
Preference number: 2 (lower is better)
Translates to: SWGRASYTELGPTALAASQLYKK*STVKVH
Trigger: ATGCACTTTTACTGTGCTGCACTTTTTATAGAGCTG...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGTCTTGCTCTAAAAGATaGTCTGTAGAGTTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGSCSKR*SVEFFL
Trigger: AAGGAAAAACTCTACAGAGCATCTTTTAGAGCAAGA...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp GATGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAATTCTCCATTGGCGCCTaGTTGTCTGGGACTGTTCAC +
Preference number: 2 (lower is better)
Translates to: DAWLIRSLWLPQEANCGQFSIGA*LSGTVH
Trigger: GTGAACAGTCCCAGACAACCAGGCGCCAATGGAGAA...TTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 90 bp CTTGTTGTTCTTGAAAGTCATGGCACAGGCAAACGGGGTCAGCCCTaGTCTGTCTCGTACATTCAAATGGATATCGGGGTGAGAAACCAA +
Preference number: 2 (lower is better)
Translates to: LVVLESHGTGKRGQP*SVSYIQMDIGVRNQ
Trigger: TTGGTTTCTCACCCCGATATCCATTTGAATGTACGAGACAGACAAGGGCTGACCCCGTTTGCCTGTGCCATGACTTTCAAGAACAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp CCTTTTAAAGAACAGGTATCCATGTACCAACCACTTCAATTCATATCCGAATCAAGATGCCCTTGGGGCTaGAGCCTTGGTGACTCCCCC +
Preference number: 2 (lower is better)
Translates to: PFKEQVSMYQPLQFISESRCPWG*SLGDSP
Trigger: GGGGGAGTCACCAAGGCTTCAGCCCCAAGGGCATCT...TGATTCGGATATGAATTGAAGTGGTTGGTACATGGATACCTGTTCTTTAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp TCAGCCCTTGTCTGTCTCGTACATTCAAATGGATATCGGGGTGAGAAACCAACACGTCCTGAGTCCTGCTaGCATTTATATCTGCCTGGT +
Preference number: 2 (lower is better)
Translates to: SALVCLVHSNGYRGEKPTRPESC*HLYLPG
Trigger: ACCAGGCAGATATAAATGTCAGCAGGACTCAGGACG...TGTTGGTTTCTCACCCCGATATCCATTTGAATGTACGAGACAGACAAGGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp TGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAATACATCACAGCCATGTCTaGCCAGAGTGGATGCGATGT +
Preference number: 2 (lower is better)
Translates to: CLVNSFTLAPARSKLRTIHHSHV*PEWMRC
Trigger: ACATCGCATCCACTCTGGTCAGACATGGCTGTGATG...TATTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp TTCCTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGTGGAAACTGACCACATaGCTCACATGGCCAAATGTT +
Preference number: 2 (lower is better)
Translates to: FLVPATVTWEVSVSLPFRWKLTT*LTWPNV
Trigger: AACATTTGGCCATGTGAGGCATGTGGTCAGTTTCCA...CCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR GCA 90 bp TTGGCGCCTGGTTGTCTGGGACTGTTCACGTCACAGCCACTGCGAATAAGAAAGGTCGTCCCAATGACTTaGAATAATTTCTGCACAGTA +
Preference number: 2 (lower is better)
Translates to: LAPGCLGLFTSQPLRIRKVVPMT*NNFCTV
Trigger: TACTGTGCAGAAATTATTGCAAGTCATTGGGACGAC...CTTTCTTATTCGCAGTGGCTGTGACGTGAACAGTCCCAGACAACCAGGCGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp TGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAATACCCCACTTGTTTCTGTaGTTGACATGGGCACCGTTG +
Preference number: 2 (lower is better)
Translates to: CLVNSFTLAPARSKLRTIPHLFL*LTWAPL
Trigger: CAACGGTGCCCATGTCAACCACAGAAACAAGTGGGG...TATTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp CAATACAGAGGACACACTATCCAGAAAAGAATGAACAAAGAACAGGCTGTTGCAGGCGGGAAGACTTCATaGATGCTCTGGGATGGACAC +
Preference number: 2 (lower is better)
Translates to: QYRGHTIQKRMNKEQAVAGGKTS*MLWDGH
Trigger: GTGTCCATCCCAGAGCATTCATGAAGTCTTCCCGCC...TGCAACAGCCTGTTCTTTGTTCATTCTTTTCTGGATAGTGTGTCCTCTGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp AACATTCTGTATGAAATATGTCAGACTGGGGGACGGGGGATCTCTTCTAATTCATCTCCAACAGCAGAGTaGCTGAGGACTCCACAGACA +
Preference number: 2 (lower is better)
Translates to: NILYEICQTGGRGISSNSSPTAE*LRTPQT
Trigger: TGTCTGTGGAGTCCTCAGTCACTCTGCTGTTGGAGA...TGAATTAGAAGAGATCCCCCGTCCCCCAGTCTGACATATTTCATACAGAATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp TTCCTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGAGGTCCAGTCAAAGCTaGTCATTAGAATCACTGATG +
Preference number: 2 (lower is better)
Translates to: FLVPATVTWEVSVSLPFRRSSQS*SLESLM
Trigger: CATCAGTGATTCTAATGATCAGCTTTGACTGGACCT...CCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR TCA 90 bp TTCAATCAGATACAGGAAGACCACGTCTTCTCTCTCCACTTTGATGGCTTTATGTCTCACATCTCTCCCTaGGGAGCTGTAGCTGAAACC +
Preference number: 2 (lower is better)
Translates to: FNQIQEDHVFSLHFDGFMSHISP*GAVAET
Trigger: GGTTTCAGCTACAGCTCCTCAGGGAGAGATGTGAGA...CATAAAGCCATCAAAGTGGAGAGAGAAGACGTGGTCTTCCTGTATCTGATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp CCTTTTAAAGAACAGGTATCCATGTACCAACCACTTCAATTCATATCCGAATCAGAGCAGAGCAGCTGCTaGGGAGGTGACCAAGGACGT +
Preference number: 2 (lower is better)
Translates to: PFKEQVSMYQPLQFISESEQSSC*GGDQGR
Trigger: ACGTCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTC...TGATTCGGATATGAATTGAAGTGGTTGGTACATGGATACCTGTTCTTTAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp CTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGGTGGCCCAAAACTCCAAATaGAACACATGTTCTAACACA +
Preference number: 2 (lower is better)
Translates to: LVPATVTWEVSVSLPFRVAQNSK*NTCSNT
Trigger: TGTGTTAGAACATGTGTTCCATTTGGAGTTTTGGGC...CACCCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR CCA 90 bp GGCATGGTGGCTCACGCCTATCTATCTCATTTTAATGGGAACAGCCCCTTAGTTTCTCATCCCTCCATTTaGTCAAGGTTTGCCCATCAA +
Preference number: 2 (lower is better)
Translates to: GMVAHAYLSHFNGNSPLVSHPSI*SRFAHQ
Trigger: TTGATGGGCAAACCTTGACCAAATGGAGGGATGAGA...AACTAAGGGGCTGTTCCCATTAAAATGAGATAGATAGGCGTGAGCCACCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575298.1
3UTR-3UTR TCA 90 bp ATGATCCGCTTCATTCAGCTTCCCAGGGAGCTGGGAATCCATTTCAATCAGATAACACATCATCCTCTCTaGACTCCAGCTCATCTGTAT +
Preference number: 2 (lower is better)
Translates to: MIRFIQLPRELGIHFNQITHHPL*TPAHLY
Trigger: ATACAGATGAGCTGGAGTTCAGAGAGGATGATGTGT...TATCTGATTGAAATGGATTCCCAGCTCCCTGGGAAGCTGAATGAAGCGGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR GCA 90 bp CCTTTTAAAGAACAGGTATCCATGTACCAACCACTTCAATTCATATCCGAATCATACGCTGAGAGGCTCTaGCTCATCAGTCAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: PFKEQVSMYQPLQFISESYAERL*LISQPR
Trigger: CCTGGGCTGACTGATGAGGCAGAGCCTCTCAGCGTA...TGATTCGGATATGAATTGAAGTGGTTGGTACATGGATACCTGTTCTTTAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp CCTTTTAAAGAACAGGTATCCATGTACCAACCACTTCAATTCATATCCGAATCAGTCAAGCGGCCCAGCTaGACTCCTGACACCTCAGTA +
Preference number: 2 (lower is better)
Translates to: PFKEQVSMYQPLQFISESVKRPS*TPDTSV
Trigger: TACTGAGGTGTCAGGAGTGCAGCTGGGCCGCTTGAC...TGATTCGGATATGAATTGAAGTGGTTGGTACATGGATACCTGTTCTTTAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp ATTGCTATCCCTGGACTCAGGCTTAGAAGCAAGTTTGAATCAACATATTTGAAAACTTCCAAAGTAAGGTaGCGCACACGTGGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: IAIPGLRLRSKFESTYLKTSKVR*RTRGQG
Trigger: GCCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGT...TTTCAAATATGTTGATTCAAACTTGCTTCTAAGCCTGAGTCCAGGGATAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR CAA 90 bp AAAACAGGACTCAATGTTCTCCCAGTCCATAGCTGGTCAGTACCATaGCTATCCCTGGACTCAGGCTTAGAAGCAAGTTTGAATCAACAT +
Preference number: 2 (lower is better)
Translates to: KTGLNVLPVHSWSVP*LSLDSGLEASLNQH
Trigger: ATGTTGATTCAAACTTGCTTCTAAGCCTGAGTCCAGGGATAGCAATGGTACTGACCAGCTATGGACTGGGAGAACATTGAGTCCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR CAA 90 bp CCCTTCCTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTaGCCTTTCAGGGTGAAGCATTACATAGTTCAAAAGTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: PFLVPATVTWEVSVS*PFRVKHYIVQKCSF
Trigger: AAAAGAACACTTTTGAACTATGTAATGCTTCACCCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAGGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR GCA 90 bp TTCCTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGCAGCTCTATAAAAAGTaGAGCACAGTAAAAGTGCAT +
Preference number: 2 (lower is better)
Translates to: FLVPATVTWEVSVSLPFRQLYKK*STVKVH
Trigger: ATGCACTTTTACTGTGCTGCACTTTTTATAGAGCTG...CCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR GCA 90 bp CTTGTTCAGATCAAACTTTATAATAGGAATCTCCTTGGTCGAGCATTTATGGCAATGGGCACCGTTGGTTaGCAGGAAAAGAGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: LVQIKLYNRNLLGRAFMAMGTVG*QEKSCC
Trigger: GCAGCAGCTCTTTTCCTGGCAACCAACGGTGCCCAT...TGCCATAAATGCTCGACCAAGGAGATTCCTATTATAAAGTTTGATCTGAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp CTGGGAATTTCAGGGTTTTTATCTTGCCAGTCAGCTCTCACTAAAGTACTTCCACTGCCTGCTTCCTTATaGCCCTTTCCAGGTAATAGA +
Preference number: 2 (lower is better)
Translates to: LGISGFLSCQSALTKVLPLPASL*PFPGNR
Trigger: TCTATTACCTGGAAAGGGCCATAAGGAAGCAGGCAG...TGGAAGTACTTTAGTGAGAGCTGACTGGCAAGATAAAAACCCTGAAATTCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR TCA 90 bp CCTTTTAAAGAACAGGTATCCATGTACCAACCACTTCAATTCATATCCGAATCATCTCCAACAGCAGAGTaGCTGAGGACTCCACAGACA +
Preference number: 2 (lower is better)
Translates to: PFKEQVSMYQPLQFISESSPTAE*LRTPQT
Trigger: TGTCTGTGGAGTCCTCAGTCACTCTGCTGTTGGAGA...TGATTCGGATATGAATTGAAGTGGTTGGTACATGGATACCTGTTCTTTAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp GTTTCAGTAAAGTTTACTTTTCCTGCTCTACTCATTCAGAAGTGGCAACTTTCTTCTCCAACAGCAGAGTaGCTGAGGACTCCACAGACA +
Preference number: 2 (lower is better)
Translates to: VSVKFTFPALLIQKWQLSSPTAE*LRTPQT
Trigger: TGTCTGTGGAGTCCTCAGTCACTCTGCTGTTGGAGA...AGAAAGTTGCCACTTCTGAATGAGTAGAGCAGGAAAAGTAAACTTTACTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000570535.5
3UTR-3UTR GCA 90 bp GTTTCAGTAAAGTTTACTTTTCCTGCTCTACTCATTCAGAAGTGGCAACTTTCTGCTGGTCAGTACCATTaGTATCCCTGGACTCAGGCT +
Preference number: 2 (lower is better)
Translates to: VSVKFTFPALLIQKWQLSAGQYH*YPWTQA
Trigger: AGCCTGAGTCCAGGGATAGCAATGGTACTGACCAGC...AGAAAGTTGCCACTTCTGAATGAGTAGAGCAGGAAAAGTAAACTTTACTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000570535.5
3UTR CAA 90 bp TCCATTTCAATCAGATACAGGAAGACCACGTCTTCTCTCTCCACTTaGATGGCTTTATGTAGCGGGTACTCTGTCTTGGATTTGATCATT +
Preference number: 2 (lower is better)
Translates to: SISIRYRKTTSSLST*MALCSGYSVLDLII
Trigger: AATGATCAAATCCAAGACAGAGTACCCGCTACATAAAGCCATCAAAGTGGAGAGAGAAGACGTGGTCTTCCTGTATCTGATTGAAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR TCA 90 bp GTTTCAGTAAAGTTTACTTTTCCTGCTCTACTCATTCAGAAGTGGCAACTTTCTGAGATTCGTGTGAGCTaGGGTCCAGTCAAAGCTGAT +
Preference number: 2 (lower is better)
Translates to: VSVKFTFPALLIQKWQLSEIRVS*GPVKAD
Trigger: ATCAGCTTTGACTGGACCTCAGCTCACACGAATCTC...AGAAAGTTGCCACTTCTGAATGAGTAGAGCAGGAAAAGTAAACTTTACTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000570535.5
3UTR-3UTR GCA 90 bp CTTGTTCAGATCAAACTTTATAATAGGAATCTCCTTGGTCGAGCATTTATGGCATCCTTCTGCATCCTGTaGGTTCACGTTGGCACCAAA +
Preference number: 2 (lower is better)
Translates to: LVQIKLYNRNLLGRAFMASFCIL*VHVGTK
Trigger: TTTGGTGCCAACGTGAACGCACAGGATGCAGAAGGA...TGCCATAAATGCTCGACCAAGGAGATTCCTATTATAAAGTTTGATCTGAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp AAATTGGAATCACCGACAATGCAGCTCTATAAAAAGTGCAGCACAGTAAAAGTGATGAATGCTCTGGGATaGACACCAAGCTACTGGAAG +
Preference number: 2 (lower is better)
Translates to: KLESPTMQLYKKCSTVKVMNALG*TPSYWK
Trigger: CTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCAT...CACTTTTACTGTGCTGCACTTTTTATAGAGCTGCATTGTCGGTGATTCCAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp GCCACGATTTTTCAGCTCTCATCTTTGAACCCTGTTAAGAAAGATTTCACCTTTATGAATGCTCTGGGATaGACACCAAGCTACTGGAAG +
Preference number: 2 (lower is better)
Translates to: ATIFQLSSLNPVKKDFTFMNALG*TPSYWK
Trigger: CTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCAT...AAAGGTGAAATCTTTCTTAACAGGGTTCAAAGATGAGAGCTGAAAAATCGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp CTTGTTCAGATCAAACTTTATAATAGGAATCTCCTTGGTCGAGCATTTATGGCAGCCGTGCTGCCCTCGTaGTCTTTGAGTTCTAAATCT +
Preference number: 2 (lower is better)
Translates to: LVQIKLYNRNLLGRAFMAAVLPS*SLSSKS
Trigger: AGATTTAGAACTCAAAGACCACGAGGGCAGCACGGC...TGCCATAAATGCTCGACCAAGGAGATTCCTATTATAAAGTTTGATCTGAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CCA 90 bp AAATTGGAATCACCGACAATGCAGCTCTATAAAAAGTGCAGCACAGTAAAAGTGGGATCTATCACACCATaGTCCTTAATCGTTCCAGTC +
Preference number: 2 (lower is better)
Translates to: KLESPTMQLYKKCSTVKVGSITP*SLIVPV
Trigger: GACTGGAACGATTAAGGACCATGGTGTGATAGATCC...CACTTTTACTGTGCTGCACTTTTTATAGAGCTGCATTGTCGGTGATTCCAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CCA 90 bp CACCTCACGGTTAATATATGTACTAACAGCGATGAACGCCCAACAAGTTCTGGCTATGGATTTTTAAATTaGAATCACCGACAATGCAGC +
Preference number: 2 (lower is better)
Translates to: HLTVNICTNSDERPTSSGYGFLN*NHRQCS
Trigger: GCTGCATTGTCGGTGATTCCAATTTAAAAATCCATA...GCCAGAACTTGTTGGGCGTTCATCGCTGTTAGTACATATATTAACCGTGAGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR TCA 90 bp AACTTCTGGGAATTTCAGGGTTTTTATCTTGCCAGTCAGCTCTCACTAAAGTACATCACTTGGCCTGTATaGATCTCTTGCTCTAAAAGA +
Preference number: 2 (lower is better)
Translates to: NFWEFQGFYLASQLSLKYITWPV*ISCSKR
Trigger: TCTTTTAGAGCAAGAGATTCATACAGGCCAAGTGAT...GTACTTTAGTGAGAGCTGACTGGCAAGATAAAAACCCTGAAATTCCCAGAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR TCA 90 bp CCTTTTAAAGAACAGGTATCCATGTACCAACCACTTCAATTCATATCCGAATCAATAGAAAATGGAAACTaGCCACATGCCTCACATGGC +
Preference number: 2 (lower is better)
Translates to: PFKEQVSMYQPLQFISESIENGN*PHASHG
Trigger: GCCATGTGAGGCATGTGGTCAGTTTCCATTTTCTAT...TGATTCGGATATGAATTGAAGTGGTTGGTACATGGATACCTGTTCTTTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp CCTTTTAAAGAACAGGTATCCATGTACCAACCACTTCAATTCATATCCGAATCATGGAAACTGACCACATaGCTCACATGGCCAAATGTT +
Preference number: 2 (lower is better)
Translates to: PFKEQVSMYQPLQFISESWKLTT*LTWPNV
Trigger: AACATTTGGCCATGTGAGGCATGTGGTCAGTTTCCA...TGATTCGGATATGAATTGAAGTGGTTGGTACATGGATACCTGTTCTTTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR GCA 90 bp TGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAATAACTTGCAATAATTTCTaGACAGTAGTTCATCAGTGT +
Preference number: 2 (lower is better)
Translates to: CLVNSFTLAPARSKLRTITCNNF*TVVHQC
Trigger: ACACTGATGAACTACTGTGCAGAAATTATTGCAAGT...TATTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp GGCGAGCCCCCGACCGGACGATGGCGCGGCACAAGTTaGCGTTCCCTTTCATGTATGCCAGGAGCAGCACCG +
Preference number: 3 (lower is better)
Translates to: GEPPTGRWRGTS*RSLSCMPGAAP
Trigger: CGGTGCTGCTCCTGGCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCTCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 72 bp GGTTTGGGTTGGCGCCTTGCTGCAGGAGCTCTGCCGTaGGGTTGGCCAGGCCATGCCGACACGCTGTGTGCA +
Preference number: 3 (lower is better)
Translates to: GLGWRLAAGALP*GWPGHADTLCA
Trigger: TGCACACAGCGTGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp TGCTGCAGGAGCTCTGCCGTGAGGTTGGCCAGGCCATaGCGACACGCTGTGTGCAACGGGGTTTCTCCCCAC +
Preference number: 3 (lower is better)
Translates to: CCRSSAVRLARP*RHAVCNGVSPH
Trigger: GTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp CTGCAGGTTTGGGTTGGCGCCTTGCTGCAGGAGCTCTaGCGTGAGGTTGGCCAGGCCATGCCGACACGCTGT +
Preference number: 3 (lower is better)
Translates to: LQVWVGALLQEL*REVGQAMPTRC
Trigger: ACAGCGTGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp GCTTCCTCCGTCTGCAGGTTTGGGTTGGCGCCTTGCTaGAGGAGCTCTGCCGTGAGGTTGGCCAGGCCATGC +
Preference number: 3 (lower is better)
Translates to: ASSVCRFGLAPC*RSSAVRLARPC
Trigger: GCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp GCAGTGGCGTCTGCAGATGGACGCTGTCCGCCAAGCTaGTCAGGGATGCGGCCTCCTTTGGCAGAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: AVASADGRCPPS*SGMRPPLAEAE
Trigger: CTCTGCCTCTGCCAAAGGAGGCCGCATCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp GAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATACCCCGGCATGTCTGCAGGTTTGGGTaGGCGCCTTGCTGCAGGAGC +
Preference number: 3 (lower is better)
Translates to: EQHRAAVCIRLVQRIPRHVCRFG*APCCRS
Trigger: GCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGAC...ATGCCGGGGTATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp AGAGCTTCCTCCGTCTGCAGGTTTGGGTTGGCGCCTTaGTGCAGGAGCTCTGCCGTGAGGTTGGCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: RASSVCRFGLAP*CRSSAVRLARP
Trigger: TGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp GCGGCCTCCTTTGGCAGAGGCAGAGCTTCCTCCGTCTaGAGGTTTGGGTTGGCGCCTTGCTGCAGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: AASFGRGRASSV*RFGLAPCCRSS
Trigger: AGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp CTGCAGATGGACGCTGTCCGCCAAGCTGGTCAGGGATaGGGCCTCCTTTGGCAGAGGCAGAGCTTCCTCCGT +
Preference number: 3 (lower is better)
Translates to: LQMDAVRQAGQG*GLLWQRQSFLR
Trigger: ACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp AGCCCCCGACCGGACGATGGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATGCGCCCCGGACTCTCGTTaGAGAATGGCCTCGGCTGAC +
Preference number: 3 (lower is better)
Translates to: SPRPDDGAAQVGVPFHVCAPDSR*RMASAD
Trigger: GTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGGC...GCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp CGCCATGTGCAGTGGCGTCTGCAGATGGACGCTGTCCGCCAAGCTGGTCAGGGACATGGGCACCGTTGGTaGCCAGGAAAAGAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: RHVQWRLQMDAVRQAGQGHGHRW*PGKELL
Trigger: CAGCAGCTCTTTTCCTGGCAACCAACGGTGCCCATG...TCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTGCACATGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp GATGGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATaGCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGG +
Preference number: 3 (lower is better)
Translates to: DGAAQVGVPFHV*QEQHRAAVCIR
Trigger: CCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp CATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTaGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: HPAHKPETSKVR*RTRGQGPWLVA
Trigger: GGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CCA 72 bp CTTTGGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTaGGTTGGCGCCTTGCTGCAGGAGCTCTGCCGTGAG +
Preference number: 3 (lower is better)
Translates to: LWQRQSFLRLQV*VGALLQELCRE
Trigger: CTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACACCTCCGTCTGCAGGTTaGGGTTGGCGCCTTGCTGCA +
Preference number: 3 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTPPSAG*GWRLAA
Trigger: TGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGG...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp GCCGTGAGGTTGGCCAGGCCATGCCGACACGCTGTGTaGAACGGGGTTTCTCCCCACTTGTTTCTGTGGTTG +
Preference number: 3 (lower is better)
Translates to: AVRLARPCRHAV*NGVSPHLFLWL
Trigger: CAACCACAGAAACAAGTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCTCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp TGGTGCTCCAGCAGGAAGAGTGCGCTCTTGCTGTCCTaGCGCTGTATGGCCATGTGCAGTAGCGTCTGCCCA +
Preference number: 3 (lower is better)
Translates to: WCSSRKSALLLS*RCMAMCSSVCP
Trigger: TGGGCAGACGCTACTGCACATGGCCATACAGCGGCAGGACAGCAAGAGCGCACTCTTCCTGCTGGAGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp TGTTATTCACCCCGAGGCGAGCCCCCGACCGGACGATaGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATG +
Preference number: 3 (lower is better)
Translates to: CYSPRGEPPTGR*RGTSWRSLSCM
Trigger: CATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAATAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCAATCGTTCCAGTCTATaGCCGCAGGAAGACACCCGC +
Preference number: 3 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSNRSSL*PQEDTR
Trigger: GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATT...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CAA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCACAATCGGCCTCACCCTaGACTCATCTCCCACATTCC +
Preference number: 3 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAQSASP*THLPHS
Trigger: GGAATGTGGGAGATGAGTCAAGGGTGAGGCCGATTG...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
3UTR-3UTR CAA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCAAGCTGGTCAGTACCATaGCTATCCCTGGACTCAGGC +
Preference number: 3 (lower is better)
Translates to: APPRRGWKPGDPPKCVPASWSVP*LSLDSG
Trigger: GCCTGAGTCCAGGGATAGCAATGGTACTGACCAGCT...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
3UTR-3UTR CAA 90 bp ACCGTGTTGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGTCCTGCATGTTGGGGTaGGCACCAGCCTGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: TVLAADGHVDGGSSFCILSCMLG*APACRR
Trigger: CCTTCTGCAGGCTGGTGCCAACCCCAACATGCAGGA...CAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCAACACGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp CTGTCCTGCCGCTGTATGGCCATGTGCAGTAGCGTCTaGCCATCCGACATGGTGTCATTGATGGCGGCTCCA +
Preference number: 3 (lower is better)
Translates to: LSCRCMAMCSSV*PSDMVSLMAAP
Trigger: TGGAGCCGCCATCAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCAGGACAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp TATCTGCCTGGTGCTCCAGCAGGAAGAGTGCGCTCTTaGTGTCCTGCCGCTGTATGGCCATGTGCAGTAGCG +
Preference number: 3 (lower is better)
Translates to: YLPGAPAGRVRS*CPAAVWPCAVA
Trigger: CGCTACTGCACATGGCCATACAGCGGCAGGACAGCAAGAGCGCACTCTTCCTGCTGGAGCACCAGGCAGATA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp TTTCATGTATGCCAGGAGCAGCACCGTGCTGCCGTCTaGATCCGGCTTGTCCAGAGGATACCCCGGCATGCA +
Preference number: 3 (lower is better)
Translates to: FHVCQEQHRAAV*IRLVQRIPRHA
Trigger: TGCATGCCGGGGTATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACATGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp AAACAGTTTCCTGTCGCCGTGTCAGGTGCGTCTGTGTaGCTGCCGCGCTGGATGAGTCTGGCTGCAAAGCTG +
Preference number: 3 (lower is better)
Translates to: KQFPVAVSGASV*LPRWMSLAAKL
Trigger: CAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACCTGACACGGCGACAGGAAACTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp CACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTaGCGTCTGCAGATGGACGCTGTCCGCCAAGCTGGT +
Preference number: 3 (lower is better)
Translates to: HIRMVIGDRHVQ*RLQMDAVRQAG
Trigger: ACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp CTTTGGTGCAGGCAGGAAGTCAGGAAGGATGGCACAGGCCTGGCAGGCTGCCTGTCCTCAGTAGGATCCTaGGGTGTGCTCATCTCATCC +
Preference number: 3 (lower is better)
Translates to: LWCRQEVRKDGTGLAGCLSSVGS*GVLISS
Trigger: GGATGAGATGAGCACACCCAAGGATCCTACTGAGGA...CAGGCAGCCTGCCAGGCCTGTGCCATCCTTCCTGACTTCCTGCCTGCACCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
3UTR-3UTR CAA 90 bp TCCACTGTGCACTCTGTCAGGAGAACCCGGATGTTGTTGAGCCGGCCGTGCATGAAAGGAGTCCTCCCCTaGCTGTCCTGCATGTTGGGG +
Preference number: 3 (lower is better)
Translates to: STVHSVRRTRMLLSRPCMKGVLP*LSCMLG
Trigger: CCCCAACATGCAGGACAGCAAGGGGAGGACTCCTTT...CATGCACGGCCGGCTCAACAACATCCGGGTTCTCCTGACAGAGTGCACAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp CTTTGGTGCAGGCAGGAAGTCAGGAAGGATGGCACAGGCCTGGCAGGCTGCCTGCCATTTGGTCAAGGTTaGCCCATCAATGTGCAGGAC +
Preference number: 3 (lower is better)
Translates to: LWCRQEVRKDGTGLAGCLPFGQG*PINVQD
Trigger: GTCCTGCACATTGATGGGCAAACCTTGACCAAATGG...CAGGCAGCCTGCCAGGCCTGTGCCATCCTTCCTGACTTCCTGCCTGCACCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
3UTR TCA 72 bp TCGTTGTTTTCATCAATGGCTCTGTGCAGGAGCGTCTaGAGGCACCCACCAGGTCCCGGACCCCAGCATGTG +
Preference number: 3 (lower is better)
Translates to: SLFSSMALCRSV*RHPPGPGPQHV
Trigger: CACATGCTGGGGTCCGGGACCTGGTGGGTGCCTTCAGACGCTCCTGCACAGAGCCATTGATGAAAACAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 72 bp GACGTCCGCAGTGACGACAGTGGTGTTTGCGAGTGGTaGCTCCGAACCTGGCAGTGCACTCATAGCAGTAGG +
Preference number: 3 (lower is better)
Translates to: DVRSDDSGVCEW*LRTWQCTHSSR
Trigger: CCTACTGCTATGAGTGCACTGCCAGGTTCGGAGTCACCACTCGCAAACACCACTGTCGTCACTGCGGACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp ATGGACACATGTAAAGGAGTCCTCCCCTTGCTGTCCTaGATGTTGGGGTTGGCACCAGCCTGCAGAAGGGCC +
Preference number: 3 (lower is better)
Translates to: MDTCKGVLPLLS*MLGLAPACRRA
Trigger: GGCCCTTCTGCAGGCTGGTGCCAACCCCAACATGCAGGACAGCAAGGGGAGGACTCCTTTACATGTGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp AAGGGGTTCACAGACTGGTCAGAAGACACTGTGATATaGTGCACTGCCAGCCACAGAGCCGTGCTGCCCTCG +
Preference number: 3 (lower is better)
Translates to: KGFTDWSEDTVI*CTASHRAVLPS
Trigger: CGAGGGCAGCACGGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACCAGTCTGTGAACCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp AGTGCGCTCTTGCTGTCCTGCCGCTGTATGGCCATGTaGAGTAGCGTCTGCCCATCCGACATGGTGTCATTG +
Preference number: 3 (lower is better)
Translates to: SALLLSCRCMAM*SSVCPSDMVSL
Trigger: CAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCAGGACAGCAAGAGCGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp GAACTGTACAAGGCCACAAGGTGCAGTGGTGTCTCCTaGGCACCCAGTGTAGCAGCGTTGACAAAGGCCCCA +
Preference number: 3 (lower is better)
Translates to: ELYKATRCSGVS*APSVAALTKAP
Trigger: TGGGGCCTTTGTCAACGCTGCTACACTGGGTGCCCAGGAGACACCACTGCACCTTGTGGCCTTGTACAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp GTCGCCGTGTCAGGTGCGTCTGTGTGGCTGCCGCGCTaGATGAGTCTGGCTGCAAAGCTGTTCTCATCAAAT +
Preference number: 3 (lower is better)
Translates to: VAVSGASVWLPR*MSLAAKLFSSN
Trigger: ATTTGATGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACCTGACACGGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp CATAGCAGTAGGAGCCGTCACACCACGGAGGCTCCTTaGACAGCATATCCAGCAGTCGGAACAGGAGCTGCT +
Preference number: 3 (lower is better)
Translates to: HSSRSRHTTEAP*TAYPAVGTGAA
Trigger: AGCAGCTCCTGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCTACTGCTATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGCTTGGGGCTGAAGCCTaGGTGACTCCCCCTCTCATC +
Preference number: 3 (lower is better)
Translates to: GRISARSICVKDIGPAGLLGAEA*VTPPLI
Trigger: GATGAGAGGGGGAGTCACCAAGGCTTCAGCCCCAAG...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CAA 90 bp CGGCCCTTGTTATCCACCTGCTCAGCAGCCCCGGACTCTCGTTTGAGAATGGCCCACTTGTTTCTGTGGTaGACATGGGCACCGTTGGTT +
Preference number: 3 (lower is better)
Translates to: RPLLSTCSAAPDSRLRMAHLFLW*TWAPLV
Trigger: AACCAACGGTGCCCATGTCAACCACAGAAACAAGTG...GGCCATTCTCAAACGAGAGTCCGGGGCTGCTGAGCAGGTGGATAACAAGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp TGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGTGCGTTCTGTCCTCCAGATTGTTaGCCAATGCAAGCCACAGCG +
Preference number: 3 (lower is better)
Translates to: WLLMATWMGVLPSASCAFCPPDC*PMQATA
Trigger: CGCTGTGGCTTGCATTGGCAAACAATCTGGAGGACA...GAACGCACAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp ACCGTGTTGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGGCGATGTCCTCCAGATaGTTTGCCAATGCAAGCCAC +
Preference number: 3 (lower is better)
Translates to: TVLAADGHVDGGSSFCILAMSSR*FANASH
Trigger: GTGGCTTGCATTGGCAAACAATCTGGAGGACATCGC...CAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCAACACGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 72 bp CTTCGAAGGGGTTCACAGACTGGTCAGAAGACACTGTaGTATGCTGCACTGCCAGCCACAGAGCCGTGCTGC +
Preference number: 3 (lower is better)
Translates to: LRRGSQTGQKTL*YAALPATEPCC
Trigger: GCAGCACGGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACCAGTCTGTGAACCCCTTCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 72 bp CCGTGTCAGGTGCGTCTGTGTGGCTGCCGCGCTGGATaGGTCTGGCTGCAAAGCTGTTCTCATCAAATGAAG +
Preference number: 3 (lower is better)
Translates to: PCQVRLCGCRAG*VWLQSCSHQMK
Trigger: CTTCATTTGATGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACCTGACACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 72 bp TGCATATGGCATCAACTACGAGTGGAAGCTGGTTTCTaGTGGCCAGCTGGAGGGCTGTCTCCCCGTCCTGAG +
Preference number: 3 (lower is better)
Translates to: CIWHQLRVEAGF*WPAGGLSPRPE
Trigger: CTCAGGACGGGGAGACAGCCCTCCAGCTGGCCATCAGAAACCAGCTTCCACTCGTAGTTGATGCCATATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp CTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTaGCTCATCAGTCAGCCCAGGCGGGAAGACTTCATG +
Preference number: 3 (lower is better)
Translates to: LIKQPASYAERL*LISQPRREDFM
Trigger: CATGAAGTCTTCCCGCCTGGGCTGACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CCA 72 bp GTCAGCTCCTCGGGTGCATATGGCATCAACTACGAGTaGAAGCTGGTTTCTGATGGCCAGCTGGAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: VSSSGAYGINYE*KLVSDGQLEGC
Trigger: ACAGCCCTCCAGCTGGCCATCAGAAACCAGCTTCCACTCGTAGTTGATGCCATATGCACCCGAGGAGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTAATCGTTCCAGTCTATaGCCGCAGGAAGACACCCGC +
Preference number: 3 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRNRSSL*PQEDTR
Trigger: GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATT...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CAA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCACACATGGCCAAATGTTaGCCAAGACTAGCAGAGTTT +
Preference number: 3 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAHMAKC*PRLAEF
Trigger: AAACTCTGCTAGTCTTGGCAAACATTTGGCCATGTG...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
3UTR-3UTR CAA 90 bp GATGCGGCCTCCTTTGGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTGGGTTGCCTCTTTGGATTCCTTaGTGTAACAAGCTCCAGCCA +
Preference number: 3 (lower is better)
Translates to: DAASFGRGRASSVCRFGLPLWIP*CNKLQP
Trigger: TGGCTGGAGCTTGTTACACAAAGGAATCCAAAGAGG...CAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 72 bp TCTGCCTCATCAGTCAGCCCAGGCGGGAAGACTTCATaGATGCTCTGGGATGGACACCAAGCTACTGGAAGG +
Preference number: 3 (lower is better)
Translates to: SASSVSPGGKTS*MLWDGHQATGR
Trigger: CCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCCCGCCTGGGCTGACTGATGAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR TCA 72 bp CTGAGATCCACACAGGGACCCATTCAGGGACAAGAGTaGGGACACAGAACGGGGTGGTCAGAAATGACTCGG +
Preference number: 3 (lower is better)
Translates to: LRSTQGPIQGQE*GHRTGWSEMTR
Trigger: CCGAGTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCCTGTGTGGATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR GCA 72 bp TCTATCACACCATGGTCCTTAATCGTTCCAGTCTATTaGCGCAGGAAGACACCCGCCAGCTCCTGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: SITPWSLIVPVY*RRKTPASSCSG
Trigger: CCCAGAGCAGGAGCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR GCA 72 bp CCTCATCAGTCAGCCCAGGCGGGAAGACTTCATGAATaGTCTGGGATGGACACCAAGCTACTGGAAGGGGAA +
Preference number: 3 (lower is better)
Translates to: PHQSAQAGRLHE*SGMDTKLLEGE
Trigger: TTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCCCGCCTGGGCTGACTGATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR GCA 72 bp TCATCCCTCCATTTGGTCAAGGTTTGCCCATCAATGTaGAGGACCCAGGCAAGTTCACGGCCTGTCCTGGAG +
Preference number: 3 (lower is better)
Translates to: SSLHLVKVCPSM*RTQASSRPVLE
Trigger: CTCCAGGACAGGCCGTGAACTTGCCTGGGTCCTGCACATTGATGGGCAAACCTTGACCAAATGGAGGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
3UTR GCA 72 bp CCACTTGTTTCTGTGGTTGACATGGGCACCGTTGGTTaGCAGGAAAAGAGCTGCTGCCTCGTTTCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: PLVSVVDMGTVG*QEKSCCLVSCS
Trigger: GGAGCAGGAAACGAGGCAGCAGCTCTTTTCCTGGCAACCAACGGTGCCCATGTCAACCACAGAAACAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp TGTACTGTCTCTTCCAGCCCCCAAGAGGCTGCCAAATaGAAAGGGGTCTGCCCATCTCTAGCCTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: CTVSSSPQEAAK*KGVCPSLASSS
Trigger: AGAGGAAGAGGCTAGAGATGGGCAGACCCCTTTGCATTTGGCAGCCTCTTGGGGGCTGGAAGAGACAGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp AAGACACTGTACTGTCTCTTCCAGCCCCCAAGAGGCTaGCAAATGCAAAGGGGTCTGCCCATCTCTAGCCTC +
Preference number: 3 (lower is better)
Translates to: KTLYCLFQPPRG*QMQRGLPISSL
Trigger: GAGGCTAGAGATGGGCAGACCCCTTTGCATTTGGCAGCCTCTTGGGGGCTGGAAGAGACAGTACAGTGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp CGTCTGCATCCGGCTTGTCCAGAGGATACCCCGGCATaGATTCTAGGAAGAGATCAAAGATGGCCGCTGCAT +
Preference number: 3 (lower is better)
Translates to: RLHPACPEDTPA*ILGRDQRWPLH
Trigger: ATGCAGCGGCCATCTTTGATCTCTTCCTAGAATGCATGCCGGGGTATCCTCTGGACAAGCCGGATGCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp TTCCTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGCCAGGGCAGGGCATGTaGGAGTCAGCTCCCACTCAA +
Preference number: 3 (lower is better)
Translates to: FLVPATVTWEVSVSLPFRPGQGM*ESAPTQ
Trigger: TTGAGTGGGAGCTGACTCCAACATGCCCTGCCCTGG...CCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR CAA 90 bp TGCAGTGGTGTCTCCTGGGCACCCAGTGTAGCAGCGTTGACAAAGGCCCCATTCTCTTCTCTCTCCACTTaGATGGCTTTATGTAGCGGG +
Preference number: 3 (lower is better)
Translates to: CSGVSWAPSVAALTKAPFSSLST*MALCSG
Trigger: CCCGCTACATAAAGCCATCAAAGTGGAGAGAGAAGA...GAATGGGGCCTTTGTCAACGCTGCTACACTGGGTGCCCAGGAGACACCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp AGTTCTGAACTGCCACATGAAGGAAATTCCGGCCCTTGTTATCCACCTGCTCAGTTGCTGTCCTGCATGTaGGGGTTGGCACCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: SSELPHEGNSGPCYPPAQLLSCM*GLAPAC
Trigger: GCAGGCTGGTGCCAACCCCAACATGCAGGACAGCAA...CTGAGCAGGTGGATAACAAGGGCCGGAATTTCCTTCATGTGGCAGTTCAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 72 bp AAAGTGCATTTCCTCCAGCACTCTCCAACAGCAGAGTaGCTGAGGACTCCACAGACAGGACGCAGCAAGACG +
Preference number: 3 (lower is better)
Translates to: KVHFLQHSPTAE*LRTPQTGRSKT
Trigger: CGTCTTGCTGCGTCCTGTCTGTGGAGTCCTCAGTCACTCTGCTGTTGGAGAGTGCTGGAGGAAATGCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR GCA 72 bp AGCTCTCCCCTTTCCCAAGACGTTCCCTCCACTCCGTaGCCGTGGAGAAGATTAGTGCAGAAACGGTTCAAT +
Preference number: 3 (lower is better)
Translates to: SSPLSQDVPSTP*PWRRLVQKRFN
Trigger: ATTGAACCGTTTCTGCACTAATCTTCTCCACGGGCACGGAGTGGAGGGAACGTCTTGGGAAAGGGGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR CCA 72 bp CCCCTTTCCCAAGACGTTCCCTCCACTCCGTGCCCGTaGAGAAGATTAGTGCAGAAACGGTTCAATATGGCA +
Preference number: 3 (lower is better)
Translates to: PLSQDVPSTPCP*RRLVQKRFNMA
Trigger: TGCCATATTGAACCGTTTCTGCACTAATCTTCTCCACGGGCACGGAGTGGAGGGAACGTCTTGGGAAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR CCA 72 bp TGCTGCACTGCCAGCCACAGAGCCGTGCTGCCCTCGTaGTCTTTGAGTTCTAAATCTAGTTGTTTGCACTGC +
Preference number: 3 (lower is better)
Translates to: CCTASHRAVLPS*SLSSKSSCLHC
Trigger: GCAGTGCAAACAACTAGATTTAGAACTCAAAGACCACGAGGGCAGCACGGCTCTGTGGCTGGCAGTGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGTTTCAGCTCTCATCTTaGAACCCTGTTAAGAAAGAT +
Preference number: 3 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWFQLSS*NPVKKD
Trigger: ATCTTTCTTAACAGGGTTCAAAGATGAGAGCTGAAA...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CAA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGTTCAGCAAGAAGCATTaGTGTCAAGGACATAGGACC +
Preference number: 3 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGFSKKH*CQGHRT
Trigger: GGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAA...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CAA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACACTGCTGAGTGTTTCTTaGAACTGTACAAGGCCACAA +
Preference number: 3 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTLLSVS*NCTRPQ
Trigger: TTGTGGCCTTGTACAGTTCAAAGAAACACTCAGCAG...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp GATGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAAGTTTGGGTTGGCGCCTaGCTGCAGGAGCTCTGCCGT +
Preference number: 3 (lower is better)
Translates to: DAWLIRSLWLPQEANCGQVWVGA*LQELCR
Trigger: ACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAAC...TTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACACCCGCAAGAAGCAAATaGCGGACAATAATTTCTGAG +
Preference number: 3 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTPARSK*RTIISE
Trigger: CTCAGAAATTATTGTCCGCAATTTGCTTCTTGCGGG...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 72 bp AACTTACAACAGCTAGGCAGGTTTGTACGCAAGTGTTaGCAGCAGGGAGAGCACGGGAAGGGCTGGAAGCAT +
Preference number: 3 (lower is better)
Translates to: NLQQLGRFVRKC*QQGEHGKGWKH
Trigger: ATGCTTCCAGCCCTTCCCGTGCTCTCCCTGCTGTCAACACTTGCGTACAAACCTGCCTAGCTGTTGTAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000570535.5
3UTR TCA 72 bp CAAAGAAACAATGCTGATAAGCGCCGTGGTCCTCTATaGTACCATCACCCCACACTGAGCACCACCCCGAAG +
Preference number: 3 (lower is better)
Translates to: QRNNADKRRGPL*YHHPTLSTTPK
Trigger: CTTCGGGGTGGTGCTCAGTGTGGGGTGATGGTATCATAGAGGACCACGGCGCTTATCAGCATTGTTTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
3UTR TCA 72 bp CAGCCACTCTTGTCCACCATGTCCACATCAGCTTTGTaGCTAACCAGCGTGGTGGCAATACTCTCCAGTCGT +
Preference number: 3 (lower is better)
Translates to: QPLLSTMSTSAL*LTSVVAILSSR
Trigger: ACGACTGGAGAGTATTGCCACCACGCTGGTTAGTCACAAAGCTGATGTGGACATGGTGGACAAGAGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp TTTACCACGGGGACATCTTCGAAGGGGTTCACAGACTaGTCAGAAGACACTGTGATATGCTGCACTGCCAGC +
Preference number: 3 (lower is better)
Translates to: FTTGTSSKGFTD*SEDTVICCTAS
Trigger: GCTGGCAGTGCAGCATATCACAGTGTCTTCTGACCAGTCTGTGAACCCCTTCGAAGATGTCCCCGTGGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp CACCTCACGGTTAATATATGTACTAACAGCGATGAACGCCCAACAAGTTCTGGCCTTGGGGCTGAAGCCTaGGTGACTCCCCCTCTCATC +
Preference number: 3 (lower is better)
Translates to: HLTVNICTNSDERPTSSGLGAEA*VTPPLI
Trigger: GATGAGAGGGGGAGTCACCAAGGCTTCAGCCCCAAG...GCCAGAACTTGTTGGGCGTTCATCGCTGTTAGTACATATATTAACCGTGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CAA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCATTCAGCAAGAAGCATTaGTGTCAAGGACATAGGACC +
Preference number: 3 (lower is better)
Translates to: SWGRASYTELGPTALAASFSKKH*CQGHRT
Trigger: GGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAA...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR TCA 72 bp CACGTAGACCCCACTCCTTGGAGAGAACGTGGCAGGTaGACTGAGCAATCGAATCCAGCCTCAACTAAATTG +
Preference number: 3 (lower is better)
Translates to: HVDPTPWRERGR*TEQSNPASTKL
Trigger: CAATTTAGTTGAGGCTGGATTCGATTGCTCAGTTCACCTGCCACGTTCTCTCCAAGGAGTGGGGTCTACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR CAA 90 bp GAAGTCCGGAATGATCTGCAAGTTGTTGGTGGCATGAAGAGCATTGGCTTTCTGCCCAGTGTAGCAGCGTaGACAAAGGCCCCATTCTTA +
Preference number: 3 (lower is better)
Translates to: EVRNDLQVVGGMKSIGFLPSVAA*TKAPFL
Trigger: TAAGAATGGGGCCTTTGTCAACGCTGCTACACTGGG...CAGAAAGCCAATGCTCTTCATGCCACCAACAACTTGCAGATCATTCCGGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp GAAGTCCGGAATGATCTGCAAGTTGTTGGTGGCATGAAGAGCATTGGCTTTCTGTTGACATGGGCACCGTaGGTTGCCAGGAAAAGAGCT +
Preference number: 3 (lower is better)
Translates to: EVRNDLQVVGGMKSIGFLLTWAP*VARKRA
Trigger: AGCTCTTTTCCTGGCAACCAACGGTGCCCATGTCAA...CAGAAAGCCAATGCTCTTCATGCCACCAACAACTTGCAGATCATTCCGGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 72 bp CTGAAGTCCGGAATGATCTGCAAGTTGTTGGTGGCATaGAGAGCATTGGCTTTCTGCTCCAGGATGACAGAC +
Preference number: 3 (lower is better)
Translates to: LKSGMICKLLVA*RALAFCSRMTD
Trigger: GTCTGTCATCCTGGAGCAGAAAGCCAATGCTCTTCATGCCACCAACAACTTGCAGATCATTCCGGACTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp TTGGCGCCTGGTTGTCTGGGACTGTTCACGTCACAGCCACTGCGAATAAGAAAGGTAGCTGAAACCGATTaGCTAGTTTCATCAGTTCAG +
Preference number: 3 (lower is better)
Translates to: LAPGCLGLFTSQPLRIRKVAETD*LVSSVQ
Trigger: CTGAACTGATGAAACTAGCAAATCGGTTTCAGCTAC...CTTTCTTATTCGCAGTGGCTGTGACGTGAACAGTCCCAGACAACCAGGCGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp GATGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAATGGTCTCGGGAATCTTaGAGGCTGAAGTCCGGAATG +
Preference number: 3 (lower is better)
Translates to: DAWLIRSLWLPQEANCGQWSRES*RLKSGM
Trigger: CATTCCGGACTTCAGCCTCAAAGATTCCCGAGACCA...TTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 72 bp ACACCCTTCTCACATCTCTCCCTGAGGAGCTGTAGCTaGAACCGATTTGCTAGTTTCATCAGTTCAGTCAGG +
Preference number: 3 (lower is better)
Translates to: TPFSHLSLRSCS*NRFASFISSVR
Trigger: CCTGACTGAACTGATGAAACTAGCAAATCGGTTTCAGCTACAGCTCCTCAGGGAGAGATGTGAGAAGGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR GCA 72 bp ACAGTAGTTCATCAGTGTGCTGGCATTCAGCTCCTCTaGCGTCTGGTAGAAGCGAATACAGTTCCTGACATT +
Preference number: 3 (lower is better)
Translates to: TVVHQCAGIQLL*RLVEANTVPDI
Trigger: AATGTCAGGAACTGTATTCGCTTCTACCAGACGGCAGAGGAGCTGAATGCCAGCACACTGATGAACTACTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp TGGAAAACAGGACTCAATGTTCTCCCAGTCCATAGCTaGTCAGTACCATTGCTATCCCTGGACTCAGGCTTA +
Preference number: 3 (lower is better)
Translates to: WKTGLNVLPVHS*SVPLLSLDSGL
Trigger: TAAGCCTGAGTCCAGGGATAGCAATGGTACTGACCAGCTATGGACTGGGAGAACATTGAGTCCTGTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR CAA 90 bp CACCTCACGGTTAATATATGTACTAACAGCGATGAACGCCCAACAAGTTCTGGCTCCCCCTCTCATCACTaGGCCTGTATGAATCTCTTG +
Preference number: 3 (lower is better)
Translates to: HLTVNICTNSDERPTSSGSPSHH*ACMNLL
Trigger: CAAGAGATTCATACAGGCCAAGTGATGAGAGGGGGA...GCCAGAACTTGTTGGGCGTTCATCGCTGTTAGTACATATATTAACCGTGAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR-3UTR CAA 90 bp AGTTCTGAACTGCCACATGAAGGAAATTCCGGCCCTTGTTATCCACCTGCTCAGCTGCCCTCGTGGTCTTaGAGTTCTAAATCTAGTTGT +
Preference number: 3 (lower is better)
Translates to: SSELPHEGNSGPCYPPAQLPSWS*SSKSSC
Trigger: ACAACTAGATTTAGAACTCAAAGACCACGAGGGCAG...CTGAGCAGGTGGATAACAAGGGCCGGAATTTCCTTCATGTGGCAGTTCAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR TCA 72 bp GAAAGAGGCTTTTCCTATATCCACATGGATGCGCCCTaGAGCCAATGGAAAACAGGACTCAATGTTCTCCCA +
Preference number: 3 (lower is better)
Translates to: ERGFSYIHMDAP*SQWKTGLNVLP
Trigger: TGGGAGAACATTGAGTCCTGTTTTCCATTGGCTTCAGGGCGCATCCATGTGGATATAGGAAAAGCCTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR GCA 72 bp CTTCCTCAGGTCGTCCCAATGACTTGCAATAATTTCTaGACAGTAGTTCATCAGTGTGCTGGCATTCAGCTC +
Preference number: 3 (lower is better)
Translates to: LPQVVPMTCNNF*TVVHQCAGIQL
Trigger: GAGCTGAATGCCAGCACACTGATGAACTACTGTGCAGAAATTATTGCAAGTCATTGGGACGACCTGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp CTAAGTCTGTGGAAAGAGGCTTTTCCTATATCCACATaGATGCGCCCTGAAGCCAATGGAAAACAGGACTCA +
Preference number: 3 (lower is better)
Translates to: LSLWKEAFPIST*MRPEANGKQDS
Trigger: TGAGTCCTGTTTTCCATTGGCTTCAGGGCGCATCCATGTGGATATAGGAAAAGCCTCTTTCCACAGACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR CCA 72 bp ATTGGGGTTGACCGTGCACAGGCCCAAAACTCCAAATaGAACACATGTTCTAACACATCGTTCAGTGAGACA +
Preference number: 3 (lower is better)
Translates to: IGVDRAQAQNSK*NTCSNTSFSET
Trigger: TGTCTCACTGAACGATGTGTTAGAACATGTGTTCCATTTGGAGTTTTGGGCCTGTGCACGGTCAACCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR-3UTR CAA 90 bp ACATCTAGTGAAATCGATCACAGTCTGACACACACACTGACAATCATATGGAATAATCGTTCCAGTCTATaGCCGCAGGAAGACACCCGC +
Preference number: 3 (lower is better)
Translates to: TSSEIDHSLTHTLTIIWNNRSSL*PQEDTR
Trigger: GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATT...ATTCCATATGATTGTCAGTGTGTGTGTCAGACTGTGATCGATTTCACTAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR TCA 72 bp GTTTCATCAGTTCAGTCAGGAACACATCATCCTCTCTaGACTCCAGCTCATCTGTATAGATCCAGCGAAGCA +
Preference number: 3 (lower is better)
Translates to: VSSVQSGTHHPL*TPAHLYRSSEA
Trigger: TGCTTCGCTGGATCTATACAGATGAGCTGGAGTTCAGAGAGGATGATGTGTTCCTGACTGAACTGATGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR-3UTR CAA 90 bp CCTTTTAAAGAACAGGTATCCATGTACCAACCACTTCAATTCATATCCGAATCAAATCGTTCCAGTCTATaGCCGCAGGAAGACACCCGC +
Preference number: 3 (lower is better)
Translates to: PFKEQVSMYQPLQFISESNRSSL*PQEDTR
Trigger: GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATT...TGATTCGGATATGAATTGAAGTGGTTGGTACATGGATACCTGTTCTTTAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR CAA 90 bp CAATACAGAGGACACACTATCCAGAAAAGAATGAACAAAGAACAGGCTGTTGCATCCCCCTCTCATCACTaGGCCTGTATGAATCTCTTG +
Preference number: 3 (lower is better)
Translates to: QYRGHTIQKRMNKEQAVASPSHH*ACMNLL
Trigger: CAAGAGATTCATACAGGCCAAGTGATGAGAGGGGGA...TGCAACAGCCTGTTCTTTGTTCATTCTTTTCTGGATAGTGTGTCCTCTGTATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR-3UTR CAA 90 bp CTGGGAATTTCAGGGTTTTTATCTTGCCAGTCAGCTCTCACTAAAGTACTTCCACCAGCCTCAACTAAATaGGTAATTGGGGTTGACCGT +
Preference number: 3 (lower is better)
Translates to: LGISGFLSCQSALTKVLPPASTK*VIGVDR
Trigger: ACGGTCAACCCCAATTACCAATTTAGTTGAGGCTGG...TGGAAGTACTTTAGTGAGAGCTGACTGGCAAGATAAAAACCCTGAAATTCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR TCA 72 bp TACTCTGTCTTGGATTTGATCATTTTGTATAACAACTaGGCGCTCATGCTGCTGAAATCCTCCTTCCTCAGG +
Preference number: 3 (lower is better)
Translates to: YSVLDLIILYNN*ALMLLKSSFLR
Trigger: CCTGAGGAAGGAGGATTTCAGCAGCATGAGCGCTCAGTTGTTATACAAAATGATCAAATCCAAGACAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CCA 72 bp CATATGGAATCATTTGAAATGGGATCTATCACACCATaGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: HMESFEMGSITP*SLIVPVYCRRK
Trigger: CTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATAGATCCCATTTCAAATGATTCCATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR GCA 72 bp AAATTGGAATCACCGACAATGCAGCTCTATAAAAAGTaGAGCACAGTAAAAGTGCATTTCCTCCAGCACTCT +
Preference number: 3 (lower is better)
Translates to: KLESPTMQLYKK*STVKVHFLQHS
Trigger: AGAGTGCTGGAGGAAATGCACTTTTACTGTGCTGCACTTTTTATAGAGCTGCATTGTCGGTGATTCCAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR TCA 72 bp AAAAGACTTCAGGGCAAGAGGATCCTATTATCTTTATaGAAACACTGTGCAGAAAAGTCCACAGCCACTTAC +
Preference number: 3 (lower is better)
Translates to: KRLQGKRILLSL*KHCAEKSTATY
Trigger: GTAAGTGGCTGTGGACTTTTCTGCACAGTGTTTTCATAAAGATAATAGGATCCTCTTGCCCTGAAGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CCA 72 bp AAGTTCAAAAGTCCTAAGTGTAGGCACTTAAGTTTATaGGAAATTTCGGTGTTAGAGGATCATAGCAAATTA +
Preference number: 3 (lower is better)
Translates to: KFKSPKCRHLSL*EISVLEDHSKL
Trigger: TAATTTGCTATGATCCTCTAACACCGAAATTTCCCATAAACTTAAGTGCCTACACTTAGGACTTTTGAACTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR CCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGAGGGCCCTTGGCTGGTaGCCCTTCATGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGRALGW*PFMGQG
Trigger: GCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGGCCAGGGCCCTTGGCTaGTGGCCCTTCATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGARALG*WPFMGQ
Trigger: CTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGC...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCTGTGCAGGAGCGTCTaGAGGCACCCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGLCRSV*RHPPGP
Trigger: GGGACCTGGTGGGTGCCTTCAGACGCTCCTGCACAG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCGCTGTCCGCCAAGCTaGTCAGGGATGCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGRCPPS*SGMRPP
Trigger: AGGAGGCCGCATCCCTGACCAGCTTGGCGGACAGCG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGAAGGTGGCGCACACGTaGCCAGGGCCCTTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGKVAHT*PGPLAG
Trigger: ACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTT...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGAGATGCCCTTGGGGCTaGAGCCTTGGTGACTCCCCC +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGRCPWG*SLGDSP
Trigger: GGGGGAGTCACCAAGGCTTCAGCCCCAAGGGCATCT...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGGCCCAGCAGCTGGGCTaGGATCGTGTGCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGAQQLG*DRVHAS
Trigger: ACTGGCATGCACACGATCGCAGCCCAGCTGCTGGGC...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACCCCCGACCGGACGATaGCGCGGCACAAGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAPPTGR*RGTSWR
Trigger: ACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGGGTGTTTGCGAGTGGTaGCTCCGAACCTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGGVCEW*LRTWQC
Trigger: GCACTGCCAGGTTCGGAGTCACCACTCGCAAACACC...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACCAGGAGCAGCACCGTaGTGCCGTCTGCATCCGGCT +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAPGAAP*CRLHPA
Trigger: AGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGATCAAGAGCCTCCCGTaGTGCCCTCGGGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGIKSLP*CPRGPA
Trigger: CGCGGGGCCCCGAGGGCAGCACGGGAGGCTCTTGAT...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570535.5
CDS-3UTR CCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGGTGTGGCTGCCGCGCTaGATGAGTCTGGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGVWLPR*MSLAAK
Trigger: CTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACAC...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCTCCGTCTGCAGGTTTaGGTTGGCGCCTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGLRLQV*VGALLQ
Trigger: CTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACGCTGTCCGCCAAGCTaGTCAGGGATGCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGARCPPS*SGMRPP
Trigger: AGGAGGCCGCATCCCTGACCAGCTTGGCGGACAGCG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CAA 72 bp GGGTTGGCGCCTTGCTGCAGGAGCTCTGCCGTGAGGTaGGCCAGGCCATGCCGACACGCTGTGTGCAACGGG +
Preference number: 4 (lower is better)
Translates to: GLAPCCRSSAVR*ARPCRHAVCNG
Trigger: CCCGTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGGCTGTCACTGCGGGCTaGCAGGACAAACTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGAVTAG*QDKLVS
Trigger: GCTCACAAGTTTGTCCTGGCAGCCCGCAGTGACAGC...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCGCTGTATGGCCATGTaGAGTAGCGTCTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGRCMAM*SSVCPS
Trigger: GGATGGGCAGACGCTACTGCACATGGCCATACAGCG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAGCCCCCAAGAGGCTaGCAAATGCAAAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGQPPRG*QMQRGL
Trigger: CAGACCCCTTTGCATTTGGCAGCCTCTTGGGGGCTG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACACCGTGCTGCCGTCTaGATCCGGCTTGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAHRAAV*IRLVQR
Trigger: CCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGATTTCTGAGCCTGCTTaGACAGCGAGGTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGISEPA*TARCRG
Trigger: CCCCCTGCACCTCGCTGTCCAAGCAGGCTCAGAAAT...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGGCCAGGGCCCTTGGCTaGTGGCCCTTCATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGARALG*WPFMGQ
Trigger: CTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGC...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGCAGGAGCTCTGCCGTaGGGTTGGCCAGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSAGALP*GWPGHA
Trigger: GGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACCGACATGGTGTCATTaGTGGCGGCTCCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAPTWCH*WRLQSP
Trigger: TGGGCTCTGGAGCCGCCATCAATGACACCATGTCGG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGCTGTGCAGGAGCGTCTaGAGGCACCCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGLCRSV*RHPPGP
Trigger: GGGACCTGGTGGGTGCCTTCAGACGCTCCTGCACAG...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCTGTGCAGGAGCGTCTaGAGGCACCCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGLCRSV*RHPPGP
Trigger: GGGACCTGGTGGGTGCCTTCAGACGCTCCTGCACAG...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGTGTTTGCGAGTGGTaGCTCCGAACCTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAGVCEW*LRTWQC
Trigger: GCACTGCCAGGTTCGGAGTCACCACTCGCAAACACC...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCAGCTGCTGGGGAGGTaGCCAAGGACGTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGQLLGR*PRTWPG
Trigger: TCCAGGCCACGTCCTTGGTCACCTCCCCAGCAGCTG...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGTGTCGCCGTGTCAGGTaGGTCTGTGTGGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGCRRVR*VCVAAA
Trigger: CGCGGCAGCCACACAGACGCACCTGACACGGCGACA...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGTGCCAGGAAAAGAGCTaGTGCCTCGTTTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGCQEKS*CLVSCS
Trigger: GGAGCAGGAAACGAGGCAGCAGCTCTTTTCCTGGCA...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCCTTTGGTGAGTTGGTaGCACCTGCTTCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGPLVSW*HLLPLP
Trigger: TGGCAGAGGAAGCAGGTGGCACCAACTCACCAAAGG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR CCA 90 bp ACTCCCTGGTTGTTATTCACCCCGAGGCGAGCCCCCGACCGGACGATGGCGCGGTCAGGTGCGTCTGTGTaGCTGCCGCGCTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: TPWLLFTPRRAPDRTMARSGASV*LPRWMS
Trigger: ACTCATCCAGCGCGGCAGCCACACAGACGCACCTGA...CCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAATAACAACCAGGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCGCTGTCCGCCAAGCTaGTCAGGGATGCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGRCPPS*SGMRPP
Trigger: AGGAGGCCGCATCCCTGACCAGCTTGGCGGACAGCG...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGACCACGGAGGCTCCTTaGACAGCATATCCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGTTEAP*TAYPAV
Trigger: GACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGT...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CAA 72 bp CAGAGCTTCCTCCGTCTGCAGGTTTGGGTTGGCGCCTaGCTGCAGGAGCTCTGCCGTGAGGTTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QSFLRLQVWVGA*LQELCREVGQA
Trigger: GGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 72 bp AGGCGAGCCCCCGACCGGACGATGGCGCGGCACAAGTaGGCGTTCCCTTTCATGTATGCCAGGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: RRAPDRTMARHK*AFPFMYARSST
Trigger: GGTGCTGCTCCTGGCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCTCGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGAATGACTCGGGGCTCTaGGGTAGAGGACTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGNDSGL*GRGLKV
Trigger: GACCTTTAGTCCTCTACCTCAGAGCCCCGAGTCATT...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGTGTCTGGCCCGGCACTaGCTGCAACCTCGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWCLARH*LQPREK
Trigger: CTTCTCGCGAGGTTGCAGGCAGTGCCGGGCCAGACA...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGACTCCAGCTGTCACTaGGGGCTGCCAGGACAAACT +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGADSSCH*GLPGQT
Trigger: AGTTTGTCCTGGCAGCCCGCAGTGACAGCTGGAGTC...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGCCCCCGACCGGACGATGGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATGCTGTCGCCGTGTCAGGTaGGTCTGTGTGGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: SPRPDDGAAQVGVPFHVCCRRVR*VCVAAA
Trigger: CGCGGCAGCCACACAGACGCACCTGACACGGCGACA...GCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGGGTTGGCGCCTTGCTaGAGGAGCTCTGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSGLAPC*RSSAVR
Trigger: CCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGATGTGCAGTAGCGTCTaGCCATCCGACATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGMCSSV*PSDMVS
Trigger: TGACACCATGTCGGATGGGCAGACGCTACTGCACAT...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACGCTGTATGGCCATGTaGAGTAGCGTCTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGARCMAM*SSVCPS
Trigger: GGATGGGCAGACGCTACTGCACATGGCCATACAGCG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CGCCATGTGCAGTGGCGTCTGCAGATGGACGCTGTCCGCCAAGCTGGTCAGGGACACCGTGCTGCCGTCTaGATCCGGCTTGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RHVQWRLQMDAVRQAGQGHRAAV*IRLVQR
Trigger: CCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTG...TCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTGCACATGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGTCAAGCGGCCCAGCTaGACTCCTGACACCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAVKRPS*TPDTSV
Trigger: TACTGAGGTGTCAGGAGTGCAGCTGGGCCGCTTGAC...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGATCGCCATGTGCAGTaGCGTCTGCAGATGGACGCT +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGADRHVQ*RLQMDA
Trigger: AGCGTCCATCTGCAGACGCCACTGCACATGGCGATC...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGAGGACTGAGCAGATaGTGGGCAGGTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWGGLSR*WAGPAG
Trigger: CCCAGCAGGACCTGCCCACCATCTGCTCAGTCCTCC...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAACTTCCAAAGTAAGGTaGCGCACACGTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGATSKVR*RTRGQG
Trigger: GCCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGT...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CAA 72 bp TTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTaGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: FQSKVAHTWPGP*AGGPSWGRASY
Trigger: GTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CAA 72 bp GGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTGGGTaGGCGCCTTGCTGCAGGAGCTCTGCCGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GRGRASSVCRFG*APCCRSSAVRL
Trigger: CAACCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 72 bp CGCTGTCCGCCAAGCTGGTCAGGGATGCGGCCTCCTTaGGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: RCPPSWSGMRPP*AEAELPPSAGL
Trigger: CAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCCCTGACCAGCTTGGCGGACAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCAGGCTGCCGCGCTGGATaGGTCTGGCTGCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAGCRAG*VWLQSC
Trigger: ACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCC...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR TCA 90 bp ATGTTGGGGTTGGCACCAGCCTGCAGAAGGGCCTCTGCAATCTGCGCCATCTCAGCAGGAGCTCTGCCGTaGGGTTGGCCAGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: MLGLAPACRRASAICAISAGALP*GWPGHA
Trigger: GGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGC...TGAGATGGCGCAGATTGCAGAGGCCCTTCTGCAGGCTGGTGCCAACCCCAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp CGGCCCTTGTTATCCACCTGCTCAGCAGCCCCGGACTCTCGTTTGAGAATGGCCCTGTGCAGGAGCGTCTaGAGGCACCCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RPLLSTCSAAPDSRLRMALCRSV*RHPPGP
Trigger: GGGACCTGGTGGGTGCCTTCAGACGCTCCTGCACAG...GGCCATTCTCAAACGAGAGTCCGGGGCTGCTGAGCAGGTGGATAACAAGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp TGTATGCCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATCACCGTGTTGGCTGCTaGTGGCCACGTGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: CMPGAAPCCRLHPACPEDHRVGC*WPRGWG
Trigger: CCCCCATCCACGTGGCCATCAGCAGCCAACACGGTG...ATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGCCCCGGACTCTCGTTTaGGAATGGCCTCGGCTGACT +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGPRTLV*EWPRLT
Trigger: AGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGG...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATACCCCGGCATCCCCGGACTCTCGTTTaGGAATGGCCTCGGCTGACT +
Preference number: 4 (lower is better)
Translates to: EQHRAAVCIRLVQRIPRHPRTLV*EWPRLT
Trigger: AGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGG...ATGCCGGGGTATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGGGTGTTTGCGAGTGGTaGCTCCGAACCTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGGVCEW*LRTWQC
Trigger: GCACTGCCAGGTTCGGAGTCACCACTCGCAAACACC...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAAGAAGACGTCCGCAGTaGCGACAGTGGTGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGARRRPQ*RQWCLR
Trigger: TCGCAAACACCACTGTCGTCACTGCGGACGTCTTCT...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGCGGGAAGACTTCATaGATGCTCTGGGATGGACAC +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAGGKTS*MLWDGH
Trigger: GTGTCCATCCCAGAGCATTCATGAAGTCTTCCCGCC...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCCAGCTTCCTACGCTaGGAGGCTCTGCCTCATCAG +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGASFLR*EALPHQ
Trigger: CTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGC...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCTGTCTGGCCCGGCACTaGCTGCAACCTCGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSCLARH*LQPREK
Trigger: CTTCTCGCGAGGTTGCAGGCAGTGCCGGGCCAGACA...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCATGCCAGGAAAAGAGCTaGTGCCTCGTTTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGACQEKS*CLVSCS
Trigger: GGAGCAGGAAACGAGGCAGCAGCTCTTTTCCTGGCA...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCTCCAGCAGGAAGAGTaGGCTCTTGCTGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGLQQEE*ALAVLP
Trigger: CGGCAGGACAGCAAGAGCGCACTCTTCCTGCTGGAG...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGGGTGAGCAGAGCAGCTaGTGGGGAGGTGACCAAGGA +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGGEQSS*WGGDQG
Trigger: TCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTCACC...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGTGAGCAGAGCAGCTaGTGGGGAGGTGACCAAGGA +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWGEQSS*WGGDQG
Trigger: TCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTCACC...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAAGTGCTTCTCCAACTTaGCCACCTCCTCTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGASASPT*PPPLPP
Trigger: TGGCGGAAGAGGAGGTGGCCAAGTTGGAGAAGCACT...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CGCCATGTGCAGTGGCGTCTGCAGATGGACGCTGTCCGCCAAGCTGGTCAGGGATGCAGTGGTGTCTCCTaGGCACCCAGTGTAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RHVQWRLQMDAVRQAGQGCSGVS*APSVAA
Trigger: CGCTGCTACACTGGGTGCCCAGGAGACACCACTGCA...TCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTGCACATGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGGCCACAAGGTGCAGTaGTGTCTCCTGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSGHKVQ*CLLGTQ
Trigger: CTGGGTGCCCAGGAGACACCACTGCACCTTGTGGCC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGTCAGGTGCGTCTGTGTaGCTGCCGCGCTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGSGASV*LPRWMS
Trigger: ACTCATCCAGCGCGGCAGCCACACAGACGCACCTGA...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCCCAGAGCCCAGCAGCTaGGCTGCGATCGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSPEPSS*AAIVCM
Trigger: CATGCACACGATCGCAGCCCAGCTGCTGGGCTCTGG...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp ACTCCCTGGTTGTTATTCACCCCGAGGCGAGCCCCCGACCGGACGATGGCGCGGCTGCTGATGGCCACGTaGATGGGGGTTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TPWLLFTPRRAPDRTMARLLMAT*MGVLPS
Trigger: AGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAG...CCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAATAACAACCAGGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGTGGGCAGGTCCTGCTaGGCAGCAAGATGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSVGRSC*AARWRA
Trigger: TGCCCTCCATCTTGCTGCCCAGCAGGACCTGCCCAC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACACCCCCGACCGGACGATaGCGCGGCACAAGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTPPTGR*RGTSWR
Trigger: ACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGG...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGCCCCCGACCGGACGATaGCGCGGCACAAGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGPPTGR*RGTSWR
Trigger: ACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGG...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGGCTGGTGGCCCTTCATaGGGCAGGGCAAGCTACACA +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGAGGPS*GRASYT
Trigger: TGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGC...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGCTTCTTCTGCAGCTTaGCATACTCCTGCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAASSAA*HTPAAE
Trigger: TTCTGCGGCAGGAGTATGTCAAGCTGCAGAAGAAGC...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCTGAGGAGCTGTAGCTaGAACCGATTTGCTAGTTTC +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGLRSCS*NRFASF
Trigger: GAAACTAGCAAATCGGTTTCAGCTACAGCTCCTCAG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAGCAGGAGCTCTGCCGTaGGGTTGGCCAGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASAGALP*GWPGHA
Trigger: GGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGC...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACTTTCTGCTCCAGGATaGCAGACACCACATCCGGAT +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGALSAPG*QTPHPD
Trigger: ATCCGGATGTGGTGTCTGTCATCCTGGAGCAGAAAG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACATCACAGCCATGTCTaGCCAGAGTGGATGCGATGT +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAHHSHV*PEWMRC
Trigger: ACATCGCATCCACTCTGGTCAGACATGGCTGTGATG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp ACTCCCTGGTTGTTATTCACCCCGAGGCGAGCCCCCGACCGGACGATGGCGCGGCATCACAGCCATGTCTaGCCAGAGTGGATGCGATGT +
Preference number: 4 (lower is better)
Translates to: TPWLLFTPRRAPDRTMARHHSHV*PEWMRC
Trigger: ACATCGCATCCACTCTGGTCAGACATGGCTGTGATG...CCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAATAACAACCAGGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGCACCGTGTTGGCTGCTaGTGGCCACGTGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGHRVGC*WPRGWG
Trigger: CCCCCATCCACGTGGCCATCAGCAGCCAACACGGTG...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCACCGTGTTGGCTGCTaGTGGCCACGTGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGHRVGC*WPRGWG
Trigger: CCCCCATCCACGTGGCCATCAGCAGCCAACACGGTG...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCTGTCACTGCGGGCTaGCAGGACAAACTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWAVTAG*QDKLVS
Trigger: GCTCACAAGTTTGTCCTGGCAGCCCGCAGTGACAGC...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGACTCCAGCTGTCACTaGGGGCTGCCAGGACAAACT +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGDSSCH*GLPGQT
Trigger: AGTTTGTCCTGGCAGCCCGCAGTGACAGCTGGAGTC...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGACTCCAGCTGTCACTaGGGGCTGCCAGGACAAACT +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWDSSCH*GLPGQT
Trigger: AGTTTGTCCTGGCAGCCCGCAGTGACAGCTGGAGTC...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGAGTAGTTCATCAGTGTaGTGGCATTCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGSSSSV*WHSAPL
Trigger: CAGAGGAGCTGAATGCCAGCACACTGATGAACTACT...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGAGAGCTTCCTCCGTCTaGAGGTTTGGGTTGGCGCCT +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGRASSV*RFGLAP
Trigger: AGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCT...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCCAAGCTGGTCAGGGATaGGGCCTCCTTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSQAGQG*GLLWQR
Trigger: CCTCTGCCAAAGGAGGCCGCATCCCTGACCAGCTTG...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGCCCCCGACCGGACGATGGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATGCATGTGCAGTGGCGTCTaGAGATGGACGCTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SPRPDDGAAQVGVPFHVCMCSGV*RWTLSA
Trigger: GGCGGACAGCGTCCATCTGCAGACGCCACTGCACAT...GCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GGTGCGTCTGTGTGGCTGCCGCGCTGGATGAGTCTGGCTGCAAAGCTGTTCTCAGCCCAGCAGCTGGGCTaGGATCGTGTGCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: GASVWLPRWMSLAAKLFSAQQLG*DRVHAS
Trigger: ACTGGCATGCACACGATCGCAGCCCAGCTGCTGGGC...TGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGCAGCCCCCAAGAGGCTaGCAAATGCAAAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWQPPRG*QMQRGL
Trigger: CAGACCCCTTTGCATTTGGCAGCCTCTTGGGGGCTG...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGCCCTTGTTATCCACCTaGTCAGCAGCCCCGGACTCT +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWPLLST*SAAPDS
Trigger: AGAGTCCGGGGCTGCTGAGCAGGTGGATAACAAGGG...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGAGGGCAGTCTGGCGATaGTTGGTTAATTCGTTCACT +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGRAVWR*LVNSFT
Trigger: AGTGAACGAATTAACCAAGCATCGCCAGACTGCCCT...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCCAGGAGCAGCACCGTaGTGCCGTCTGCATCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGPGAAP*CRLHPA
Trigger: AGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGG...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACACCAGGAGCAGCACCGTaGTGCCGTCTGCATCCGGCT +
Preference number: 4 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTPGAAP*CRLHPA
Trigger: AGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGG...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGTACGCTGAGAGGCTCTaGCTCATCAGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGYAERL*LISQPR
Trigger: CCTGGGCTGACTGATGAGGCAGAGCCTCTCAGCGTA...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCACTCCGTCTGCAGGTTTaGGTTGGCGCCTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPALRLQV*VGALLQ
Trigger: CTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAG...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCAGTGGCGTCTGCAGATaGACGCTGTCCGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSSGVCR*TLSAKL
Trigger: CAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACT...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp ACTCCCTGGTTGTTATTCACCCCGAGGCGAGCCCCCGACCGGACGATGGCGCGGTTCTCCATTGGCGCCTaGTTGTCTGGGACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: TPWLLFTPRRAPDRTMARFSIGA*LSGTVH
Trigger: GTGAACAGTCCCAGACAACCAGGCGCCAATGGAGAA...CCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAATAACAACCAGGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGCCTCTCCTTCTCCATTaGCGCCTGGTTGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWPLLLH*RLVVWD
Trigger: GTCCCAGACAACCAGGCGCCAATGGAGAAGGAGAGG...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGATTTCTGAGCCTGCTTaGACAGCGAGGTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWISEPA*TARCRG
Trigger: CCCCCTGCACCTCGCTGTCCAAGCAGGCTCAGAAAT...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCAGAGCAGAGCAGCTGCTaGGGAGGTGACCAAGGACGT +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAEQSSC*GGDQGR
Trigger: ACGTCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTC...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR CCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACAAGCTACACAGAACTaGGACCAACAGCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAQATQN*DQQHSQ
Trigger: CTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAAGGGCCCTTGGCTGGTaGCCCTTCATGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASRALGW*PFMGQG
Trigger: GCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCTGCCTGCTTCCTTATaGCCCTTTCCAGGTAATAGA +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGLPASL*PFPGNR
Trigger: TCTATTACCTGGAAAGGGCCATAAGGAAGCAGGCAG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGCAGGGCAGGGCATGTTaGAGTCAGCTCCCACTCAAG +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGQGRAC*SQLPLK
Trigger: CTTGAGTGGGAGCTGACTCCAACATGCCCTGCCCTG...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGCTACTGCCCCTCCTCTaGGATCACACAGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGLLPLL*DHTGMS
Trigger: CGACATCCCTGTGTGATCCCAGAGGAGGGGCAGTAG...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGCTACTGCCCCTCCTCTaGGATCACACAGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWLLPLL*DHTGMS
Trigger: CGACATCCCTGTGTGATCCCAGAGGAGGGGCAGTAG...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR CCA 90 bp CTTTGGTGCAGGCAGGAAGTCAGGAAGGATGGCACAGGCCTGGCAGGCTGCCTGGCCTGGCAGGCTGCCTaGAAACTGTGCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LWCRQEVRKDGTGLAGCLAWQAA*KLCTFS
Trigger: GCTGAAGGTGCACAGTTTCCAGGCAGCCTGCCAGGC...CAGGCAGCCTGCCAGGCCTGTGCCATCCTTCCTGACTTCCTGCCTGCACCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR CCA 90 bp CTTTGGTGCAGGCAGGAAGTCAGGAAGGATGGCACAGGCCTGGCAGGCTGCCTGGGAAGTCAGGAAGGATaGCACAGGCCTGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LWCRQEVRKDGTGLAGCLGSQEG*HRPGRL
Trigger: CAGCCTGCCAGGCCTGTGCCATCCTTCCTGACTTCC...CAGGCAGCCTGCCAGGCCTGTGCCATCCTTCCTGACTTCCTGCCTGCACCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR TCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGACACATCATCCTCTCTaGACTCCAGCTCATCTGTAT +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGTHHPL*TPAHLY
Trigger: ATACAGATGAGCTGGAGTTCAGAGAGGATGATGTGT...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGGGCTGCCGCGCTGGATaGGTCTGGCTGCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGGCRAG*VWLQSC
Trigger: ACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCC...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAACTTGTTTCTGTGGTTaGCATGGGCACCGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGATCFCG*HGHRWL
Trigger: CAACCAACGGTGCCCATGTCAACCACAGAAACAAGT...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCACCGTGTTGGCTGCTaGTGGCCACGTGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVHRVGC*WPRGWG
Trigger: CCCCCATCCACGTGGCCATCAGCAGCCAACACGGTG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGTGCGTCTGTGTGGCTGCCGCGCTGGATGAGTCTGGCTGCAAAGCTGTTCTCAGGTGTTTGCGAGTGGTaGCTCCGAACCTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GASVWLPRWMSLAAKLFSGVCEW*LRTWQC
Trigger: GCACTGCCAGGTTCGGAGTCACCACTCGCAAACACC...TGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGAGAAGACGTCCGCAGTaGCGACAGTGGTGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGRRRPQ*RQWCLR
Trigger: TCGCAAACACCACTGTCGTCACTGCGGACGTCTTCT...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCAGGGCTGAAGCCTTGGTaGCTCCCCCTCTCATCACTT +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAGLKPW*LPLSSL
Trigger: AAGTGATGAGAGGGGGAGTCACCAAGGCTTCAGCCC...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGATAGAAAATGGAAACTaGCCACATGCCTCACATGGC +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGIENGN*PHASHG
Trigger: GCCATGTGAGGCATGTGGTCAGTTTCCATTTTCTAT...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGTTTGTACGCAAGTGTTaGCAGCAGGGAGAGCACGGG +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGFVRKC*QQGEHG
Trigger: CCCGTGCTCTCCCTGCTGTCAACACTTGCGTACAAA...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCACCCAAGTCCCTTTGGTaGGTTGGTGCCACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAPKSLW*VGATCF
Trigger: GAAGCAGGTGGCACCAACTCACCAAAGGGACTTGGG...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp ACTCCCTGGTTGTTATTCACCCCGAGGCGAGCCCCCGACCGGACGATGGCGCGGAGCTTGACATACTCCTaGCGCAGAAGCATCAAGTGC +
Preference number: 4 (lower is better)
Translates to: TPWLLFTPRRAPDRTMARSLTYS*RRSIKC
Trigger: GCACTTGATGCTTCTGCGGCAGGAGTATGTCAAGCT...CCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGAATAACAACCAGGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGACACTGTGATATGCTaGACTGCCAGCCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWDTVIC*TASHRA
Trigger: GGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTC...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGCAGGAAAAGAGCTGCTaGCTCGTTTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWQEKSC*LVSCSS
Trigger: GCTGGAGCAGGAAACGAGGCAGCAGCTCTTTTCCTG...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATACCCCGGCATTGCCAGGAAAAGAGCTaGTGCCTCGTTTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EQHRAAVCIRLVQRIPRHCQEKS*CLVSCS
Trigger: GGAGCAGGAAACGAGGCAGCAGCTCTTTTCCTGGCA...ATGCCGGGGTATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCGGGTTGGCGCCTTGCTaGAGGAGCTCTGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVGLAPC*RSSAVR
Trigger: CCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCC...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCAGAGCTTCCTCCGTCTaGAGGTTTGGGTTGGCGCCT +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSRASSV*RFGLAP
Trigger: AGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCT...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCAAGAGCTTCCTCCGTCTaGAGGTTTGGGTTGGCGCCT +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPARASSV*RFGLAP
Trigger: AGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCT...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAAGAGCATTGGCTTTCTaGTCCAGGATGACAGACACC +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGARALAF*SRMTDT
Trigger: GGTGTCTGTCATCCTGGAGCAGAAAGCCAATGCTCT...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCCCCTTGTTATCCACCTaGTCAGCAGCCCCGGACTCT +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSPLLST*SAAPDS
Trigger: AGAGTCCGGGGCTGCTGAGCAGGTGGATAACAAGGG...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCCGCTGCATTCTCCTTaGCATATTGTCCCAAAATGT +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGPLHSP*HIVPKC
Trigger: ACATTTTGGGACAATATGGCAAGGAGAATGCAGCGG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGCACCGTGCTGCCGTCTaGATCCGGCTTGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGHRAAV*IRLVQR
Trigger: CCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTG...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCCAGGAGCAGCACCGTaGTGCCGTCTGCATCCGGCT +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVPGAAP*CRLHPA
Trigger: AGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGGAACAGCCCCTTAGTTCTCGGCAAAGCGGCCCATACTGAGGCACACCATGAGGGAAAGCCACCCGTCTaGAGGCTCCCTGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GNSPLVLGKAAHTEAHHEGKPPV*RLPAFP
Trigger: AGGGAAGGCAGGGAGCCTGCAGACGGGTGGCTTTCC...CTCATGGTGTGCCTCAGTATGGGCCGCTTTGCCGAGAACTAAGGGGCTGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR CCA 90 bp TGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGTGCGTTCGGCCACAAGGTGCAGTaGTGTCTCCTGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: WLLMATWMGVLPSASCAFGHKVQ*CLLGTQ
Trigger: CTGGGTGCCCAGGAGACACCACTGCACCTTGTGGCC...GAACGCACAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGGGCCACAAGGTGCAGTaGTGTCTCCTGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGGHKVQ*CLLGTQ
Trigger: CTGGGTGCCCAGGAGACACCACTGCACCTTGTGGCC...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CACCACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTGGCGTCTGCAGATGCGCTGTCCGCCAAGCTaGTCAGGGATGCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HHIRMVIGDRHVQWRLQMRCPPS*SGMRPP
Trigger: AGGAGGCCGCATCCCTGACCAGCTTGGCGGACAGCG...CATCTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GGTGCGTCTGTGTGGCTGCCGCGCTGGATGAGTCTGGCTGCAAAGCTGTTCTCAAGTGGCGTCTGCAGATaGACGCTGTCCGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: GASVWLPRWMSLAAKLFSSGVCR*TLSAKL
Trigger: CAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACT...TGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACTCCTCGGGTGCATATaGCATCAACTACGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGALLGCI*HQLRVE
Trigger: TTCCACTCGTAGTTGATGCCATATGCACCCGAGGAG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCTGGCGCCTGGTTGTCTaGGACTGTTCACGTCACAGC +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSWRLVV*DCSRHS
Trigger: GCTGTGACGTGAACAGTCCCAGACAACCAGGCGCCA...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCACCTCTCCTTCTCCATTaGCGCCTGGTTGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAPLLLH*RLVVWD
Trigger: GTCCCAGACAACCAGGCGCCAATGGAGAAGGAGAGG...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGCTGCTGATGGCCACGTaGATGGGGGTTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWLLMAT*MGVLPS
Trigger: AGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAG...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGTGCGTTCGGAGGACTGAGCAGATaGTGGGCAGGTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: WLLMATWMGVLPSASCAFGGLSR*WAGPAG
Trigger: CCCAGCAGGACCTGCCCACCATCTGCTCAGTCCTCC...GAACGCACAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGGGAGGACTGAGCAGATaGTGGGCAGGTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGGGLSR*WAGPAG
Trigger: CCCAGCAGGACCTGCCCACCATCTGCTCAGTCCTCC...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTCCCCCGACCGGACGATaGCGCGGCACAAGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRPPTGR*RGTSWR
Trigger: ACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGG...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCCCCCGACCGGACGATaGCGCGGCACAAGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASPPTGR*RGTSWR
Trigger: ACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGG...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CCATTTGGTCAAGGTTTGCCCATCAATGTGCAGGACCCAGGCAAGTTCACGGCCCCCCCGACCGGACGATaGCGCGGCACAAGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: PFGQGLPINVQDPGKFTAPPTGR*RGTSWR
Trigger: ACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGG...GGCCGTGAACTTGCCTGGGTCCTGCACATTGATGGGCAAACCTTGACCAAATGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGACCACGGAGGCTCCTTaGACAGCATATCCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWTTEAP*TAYPAV
Trigger: GACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGT...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGGCCACCAGGCTGGGGTaGGGAGCTTTGGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGATRLG*GALVLQ
Trigger: CTGAAGCACCAAAGCTCCCCACCCCAGCCTGGTGGC...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR CCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACCACCCCGAAGGGGCTaGAAGCCAGGTGATCCACCC +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASPPRRG*KPGDPP
Trigger: GGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGG...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR TCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGAGCGCTCATGCTGCTaGAATCCTCCTTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSERSCC*NPPSSG
Trigger: ACCTGAGGAAGGAGGATTTCAGCAGCATGAGCGCTC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGTGCCCTCGTGGTCTTTaGGTTCTAAATCTAGTTGTT +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGCPRGL*VLNLVV
Trigger: AACAACTAGATTTAGAACTCAAAGACCACGAGGGCA...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGCCCCGTCCTGAGTCCTaGCATTTATATCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGPRPES*HLYLPG
Trigger: ACCAGGCAGATATAAATGTCAGGACTCAGGACGGGG...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGGTGGAAGCTGGTTTCTaGTGGCCAGCTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGVEAGF*WPAGGL
Trigger: CAGCCCTCCAGCTGGCCATCAGAAACCAGCTTCCAC...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGGTGGAAGCTGGTTTCTaGTGGCCAGCTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGVEAGF*WPAGGL
Trigger: CAGCCCTCCAGCTGGCCATCAGAAACCAGCTTCCAC...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCATCACAGCCATGTCTaGCCAGAGTGGATGCGATGT +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGHHSHV*PEWMRC
Trigger: ACATCGCATCCACTCTGGTCAGACATGGCTGTGATG...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCAGGCGGGAAGACTTCATaGATGCTCTGGGATGGACAC +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAGGKTS*MLWDGH
Trigger: GTGTCCATCCCAGAGCATTCATGAAGTCTTCCCGCC...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCGCAGAAGCATCAAGTaGTTCTCCAACTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGRRSIK*FSNLAT
Trigger: GGTGGCCAAGTTGGAGAAGCACTTGATGCTTCTGCG...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGGGCATTCAGCTCCTCTaGCGTCTGGTAGAAGCGAAT +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGGIQLL*RLVEAN
Trigger: ATTCGCTTCTACCAGACGGCAGAGGAGCTGAATGCC...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCTACAAGGCCACAAGGTaGAGTGGTGTCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSYKATR*SGVSWA
Trigger: TGCCCAGGAGACACCACTGCACCTTGTGGCCTTGTA...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCCTGCAGAAGGGCCTCTaGAATCTGCGCCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSLQKGL*NLRHLR
Trigger: TCTGAGATGGCGCAGATTGCAGAGGCCCTTCTGCAG...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCAGACACTGTGATATGCTaGACTGCCAGCCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPADTVIC*TASHRA
Trigger: GGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTC...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCACAGGAAAAGAGCTGCTaGCTCGTTTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAQEKSC*LVSCSS
Trigger: GCTGGAGCAGGAAACGAGGCAGCAGCTCTTTTCCTG...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCATGGGCACCGTTGGTTaGCAGGAAAAGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSMGTVG*QEKSCC
Trigger: GCAGCAGCTCTTTTCCTGGCAACCAACGGTGCCCAT...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGAGGTTGGCCAGGCCATaGCGACACGCTGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGRLARP*RHAVCN
Trigger: GTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCT...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGGTTGGCGCCTTGCTaGAGGAGCTCTGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRGLAPC*RSSAVR
Trigger: CCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCC...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGCAAGCTGGTCAGGGATaGGGCCTCCTTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGQAGQG*GLLWQR
Trigger: CCTCTGCCAAAGGAGGCCGCATCCCTGACCAGCTTG...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGATGTGCAGTGGCGTCTaGAGATGGACGCTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGMCSGV*RWTLSA
Trigger: GGCGGACAGCGTCCATCTGCAGACGCCACTGCACAT...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCTCCAGCAGGAAGAGTaGGCTCTTGCTGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGLQQEE*ALAVLP
Trigger: CGGCAGGACAGCAAGAGCGCACTCTTCCTGCTGGAG...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACACTCCAGCAGGAAGAGTaGGCTCTTGCTGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTLQQEE*ALAVLP
Trigger: CGGCAGGACAGCAAGAGCGCACTCTTCCTGCTGGAG...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGGTCCTCCAGATTGTTTaGCAATGCAAGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGVLQIV*QCKPQR
Trigger: CCGCTGTGGCTTGCATTGGCAAACAATCTGGAGGAC...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCAAGAGGCTGCCAAATaGAAAGGGGTCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGQEAAK*KGVCPS
Trigger: AGATGGGCAGACCCCTTTGCATTTGGCAGCCTCTTG...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGATGGTGGGCAGGTCCTaGTGGGCAGCAAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGMVGRS*WAARWR
Trigger: CCTCCATCTTGCTGCCCAGCAGGACCTGCCCACCAT...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCACCGTGCTGCCGTCTaGATCCGGCTTGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVHRAAV*IRLVQR
Trigger: CCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAGGAGCAGCACCGTGCTaGCGTCTGCATCCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASGAAPC*RLHPAC
Trigger: ACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCC...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCATCAAAACAAATGTTaGAAACCCGCACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGHQNKC*KPAQAC
Trigger: ACAAGCCTGTGCGGGTTTGCAACATTTGTTTTGATG...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGGGTGAGCAGAGCAGCTaGTGGGGAGGTGACCAAGGA +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGGEQSS*WGGDQG
Trigger: TCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTCACC...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCTGGTCAGTACCATTaGTATCCCTGGACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGAGQYH*YPWTQA
Trigger: AGCCTGAGTCCAGGGATAGCAATGGTACTGACCAGC...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGTGCAGTGGTGTCTCCTaGGCACCCAGTGTAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGCSGVS*APSVAA
Trigger: CGCTGCTACACTGGGTGCCCAGGAGACACCACTGCA...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGTTTCTGTGGTTGACATaGGCACCGTTGGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWFLWLT*APLVAR
Trigger: CCTGGCAACCAACGGTGCCCATGTCAACCACAGAAA...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATACCCCGGCATGTTCCCCTTCTCATCTaGCACAGACATGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EQHRAAVCIRLVQRIPRHVPLLI*HRHVSS
Trigger: GGAGCTGACATGTCTGTGCCAGATGAGAAGGGGAAC...ATGCCGGGGTATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGTTCTCCATTGGCGCCTaGTTGTCTGGGACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGFSIGA*LSGTVH
Trigger: GTGAACAGTCCCAGACAACCAGGCGCCAATGGAGAA...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGCCTGTGCGTTCACGTTaGCACCAAACTCCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGPVRSR*HQTPED
Trigger: GTCTTCTGGAGTTTGGTGCCAACGTGAACGCACAGG...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCATGATGACACCGTGTTaGCTGCTGATGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSMMTPC*LLMATW
Trigger: CCACGTGGCCATCAGCAGCCAACACGGTGTCATCAT...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCAATGATGACACCGTGTTaGCTGCTGATGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAMMTPC*LLMATW
Trigger: CCACGTGGCCATCAGCAGCCAACACGGTGTCATCAT...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR CCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGTGCTGGGCAGCAAGATaGAGGGCAGTCTGGCGATGC +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGCWAAR*RAVWRC
Trigger: GCATCGCCAGACTGCCCTCCATCTTGCTGCCCAGCA...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCGTGGGCAGGTCCTGCTaGGCAGCAAGATGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVVGRSC*AARWRA
Trigger: TGCCCTCCATCTTGCTGCCCAGCAGGACCTGCCCAC...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGTGGCGCGGCACAAGTTaGCGTTCCCTTTCATGTATG +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGWRGTS*RSLSCM
Trigger: CATACATGAAAGGGAACGCCAACTTGTGCCGCGCCA...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CAA 72 bp AAAGGAGTCCTCCCCTTGCTGTCCTGCATGTTGGGGTaGGCACCAGCCTGCAGAAGGGCCTCTGCAATCTGC +
Preference number: 4 (lower is better)
Translates to: KGVLPLLSCMLG*APACRRASAIC
Trigger: GCAGATTGCAGAGGCCCTTCTGCAGGCTGGTGCCAACCCCAACATGCAGGACAGCAAGGGGAGGACTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGCTTCTTCTGCAGCTTaGCATACTCCTGCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSASSAA*HTPAAE
Trigger: TTCTGCGGCAGGAGTATGTCAAGCTGCAGAAGAAGC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACTGCAGCAGCTGACTaGACACATATTCATTCCCGG +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGTAAAD*THIHSR
Trigger: CCGGGAATGAATATGTGTTCAGTCAGCTGCTGCAGT...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACTTGTTTCTGTGGTTaGCATGGGCACCGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGTCFCG*HGHRWL
Trigger: CAACCAACGGTGCCCATGTCAACCACAGAAACAAGT...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGACTTGTTTCTGTGGTTaGCATGGGCACCGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWTCFCG*HGHRWL
Trigger: CAACCAACGGTGCCCATGTCAACCACAGAAACAAGT...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GCATCAACTACGAGTGGAAGCTGGTTTCTGATGGCCAGCTGGAGGGCTGTCTCCCCGACATGGTGTCATTaGTGGCGGCTCCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ASTTSGSWFLMASWRAVSPTWCH*WRLQSP
Trigger: TGGGCTCTGGAGCCGCCATCAATGACACCATGTCGG...GGAGACAGCCCTCCAGCTGGCCATCAGAAACCAGCTTCCACTCGTAGTTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCCGACATGGTGTCATTaGTGGCGGCTCCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVPTWCH*WRLQSP
Trigger: TGGGCTCTGGAGCCGCCATCAATGACACCATGTCGG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCCATCACAGCCATGTCTaGCCAGAGTGGATGCGATGT +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSHHSHV*PEWMRC
Trigger: ACATCGCATCCACTCTGGTCAGACATGGCTGTGATG...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACTGACTTGTTGTTCTTaGAAGTCATGGCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGALTCCS*KSWHRQ
Trigger: TTGCCTGTGCCATGACTTTCAAGAACAACAAGTCAG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGGGCATCCTGGACTCTTaGATTCACATTAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGGILDS*IHISVD
Trigger: GTCCACGCTAATGTGAATTCAAGAGTCCAGGATGCC...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCATCCTGGACTCTTaGATTCACATTAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWGILDS*IHISVD
Trigger: GTCCACGCTAATGTGAATTCAAGAGTCCAGGATGCC...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTTCTCGGCAAAGCGGCCCATACTGAGGCACACCATGAGGGCAGTAGCTCATCTGGTGTTTGCGAGTGGTaGCTCCGAACCTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VLGKAAHTEAHHEGSSSSGVCEW*LRTWQC
Trigger: GCACTGCCAGGTTCGGAGTCACCACTCGCAAACACC...AGATGAGCTACTGCCCTCATGGTGTGCCTCAGTATGGGCCGCTTTGCCGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR TCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCTCTCCAACAGCAGAGTaGCTGAGGACTCCACAGACA +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSSPTAE*LRTPQT
Trigger: TGTCTGTGGAGTCCTCAGTCACTCTGCTGTTGGAGA...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCCCTTGGAGATTCGTGTaGGCTGAGGTCCAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSPWRFV*AEVQSK
Trigger: CTTTGACTGGACCTCAGCTCACACGAATCTCCAAGG...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGGACCCATTCAGGGACAAGAGTGAGGACACAGAACGGGGTGGTCAGAAATGACAGATGCCCTTGGGGCTaGAGCCTTGGTGACTCCCCC +
Preference number: 4 (lower is better)
Translates to: GTHSGTRVRTQNGVVRNDRCPWG*SLGDSP
Trigger: GGGGGAGTCACCAAGGCTTCAGCCCCAAGGGCATCT...GTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR TCA 90 bp GTTCTCGGCAAAGCGGCCCATACTGAGGCACACCATGAGGGCAGTAGCTCATCTCTCGCTCCTTGCCAGTaGCGCTGGGGTCTTACCAGT +
Preference number: 4 (lower is better)
Translates to: VLGKAAHTEAHHEGSSSSLAPCQ*RWGLTS
Trigger: ACTGGTAAGACCCCAGCGTCACTGGCAAGGAGCGAG...AGATGAGCTACTGCCCTCATGGTGTGCCTCAGTATGGGCCGCTTTGCCGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR GCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCACGCAGAAGCATCAAGTaGTTCTCCAACTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPARRSIK*FSNLAT
Trigger: GGTGGCCAAGTTGGAGAAGCACTTGATGCTTCTGCG...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGAGCTTGACATACTCCTaGCGCAGAAGCATCAAGTGC +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWSLTYS*RRSIKC
Trigger: GCACTTGATGCTTCTGCGGCAGGAGTATGTCAAGCT...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGAGCTTGACATACTCCTaGCGCAGAAGCATCAAGTGC +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGSLTYS*RRSIKC
Trigger: GCACTTGATGCTTCTGCGGCAGGAGTATGTCAAGCT...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCATCAACTACGAGTGGAAGCTGGTTTCTGATGGCCAGCTGGAGGGCTGTCTCCCTGCTCGTAGAGGTCTaGCACGATGGCCAGCAGACG +
Preference number: 4 (lower is better)
Translates to: ASTTSGSWFLMASWRAVSLLVEV*HDGQQT
Trigger: CGTCTGCTGGCCATCGTGGCAGACCTCTACGAGCAG...GGAGACAGCCCTCCAGCTGGCCATCAGAAACCAGCTTCCACTCGTAGTTGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGGCTGTCACTGCGGGCTaGCAGGACAAACTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGAVTAG*QDKLVS
Trigger: GCTCACAAGTTTGTCCTGGCAGCCCGCAGTGACAGC...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TGTATGCCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATCTGCAGAAGGGCCTCTaGAATCTGCGCCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: CMPGAAPCCRLHPACPEDLQKGL*NLRHLR
Trigger: TCTGAGATGGCGCAGATTGCAGAGGCCCTTCTGCAG...ATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCGGGTTGGCACCAGCCTaGAGAAGGGCCTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVGLAPA*RRASAI
Trigger: GATTGCAGAGGCCCTTCTGCAGGCTGGTGCCAACCC...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCTCCCCTTGCTGTCCTaGATGTTGGGGTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGLPLLS*MLGLAP
Trigger: TGGTGCCAACCCCAACATGCAGGACAGCAAGGGGAG...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TGTATGCCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATAAGGAGTCCTCCCCTTaGTGTCCTGCATGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: CMPGAAPCCRLHPACPEDKESSP*CPACWG
Trigger: ACCCCAACATGCAGGACAGCAAGGGGAGGACTCCTT...ATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCACTGGATGAGTCTGGCTaGAAAGCTGTTCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGALDESG*KAVLIK
Trigger: TTTGATGAGAACAGCTTTGCAGCCAGACTCATCCAG...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATGTCGCCGTGTCAGGTaGGTCTGTGTGGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASCRRVR*VCVAAA
Trigger: CGCGGCAGCCACACAGACGCACCTGACACGGCGACA...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGTGCGTCTGTGTGGCTGCCGCGCTGGATGAGTCTGGCTGCAAAGCTGTTCTCACAGGAAAAGAGCTGCTaGCTCGTTTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GASVWLPRWMSLAAKLFSQEKSC*LVSCSS
Trigger: GCTGGAGCAGGAAACGAGGCAGCAGCTCTTTTCCTG...TGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GCATCAACTACGAGTGGAAGCTGGTTTCTGATGGCCAGCTGGAGGGCTGTCTCCTTTGGGTTGGCGCCTTaGTGCAGGAGCTCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: ASTTSGSWFLMASWRAVSFGLAP*CRSSAV
Trigger: CACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAA...GGAGACAGCCCTCCAGCTGGCCATCAGAAACCAGCTTCCACTCGTAGTTGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACAAGCTGGTCAGGGATaGGGCCTCCTTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASQAGQG*GLLWQR
Trigger: CCTCTGCCAAAGGAGGCCGCATCCCTGACCAGCTTG...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGAGAGCATTGGCTTTCTaGTCCAGGATGACAGACACC +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGRALAF*SRMTDT
Trigger: GGTGTCTGTCATCCTGGAGCAGAAAGCCAATGCTCT...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCCAGGCCATGCCGACACGCTGTGTGCAACGGGGTTTCTCCCCACTTGTTTCTTGGGCTGCGATCGTGTaGATGCCAGTCCATAATGCC +
Preference number: 4 (lower is better)
Translates to: GQAMPTRCVQRGFSPLVSWAAIV*MPVHNA
Trigger: GGCATTATGGACTGGCATGCACACGATCGCAGCCCA...AGAAACAAGTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCGCCCAGCAGCTGGGCTaGGATCGTGTGCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASAQQLG*DRVHAS
Trigger: ACTGGCATGCACACGATCGCAGCCCAGCTGCTGGGC...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGACACCACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTGGCGTCTGCAGGCGCTCTTGCTGTCCTaGCGCTGTATGGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: RHHIRMVIGDRHVQWRLQALLLS*RCMAMC
Trigger: GCACATGGCCATACAGCGGCAGGACAGCAAGAGCGC...CTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTGTCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGGGAAGAGTGCGCTCTTaGTGTCCTGCCGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGGRVRS*CPAAVW
Trigger: CCATACAGCGGCAGGACAGCAAGAGCGCACTCTTCC...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGTGCGTTCGGAAGAGTGCGCTCTTaGTGTCCTGCCGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: WLLMATWMGVLPSASCAFGRVRS*CPAAVW
Trigger: CCATACAGCGGCAGGACAGCAAGAGCGCACTCTTCC...GAACGCACAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTCCAGCAGGAAGAGTaGGCTCTTGCTGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASLQQEE*ALAVLP
Trigger: CGGCAGGACAGCAAGAGCGCACTCTTCCTGCTGGAG...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGAAATGCAAAGGGGTCTaGCCATCTCTAGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWKCKGV*PSLASS
Trigger: GGAAGAGGCTAGAGATGGGCAGACCCCTTTGCATTT...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGAAATGCAAAGGGGTCTaGCCATCTCTAGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGKCKGV*PSLASS
Trigger: GGAAGAGGCTAGAGATGGGCAGACCCCTTTGCATTT...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGTCCTTCTGCATCCTGTaGGTTCACGTTGGCACCAAA +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGSFCIL*VHVGTK
Trigger: TTTGGTGCCAACGTGAACGCACAGGATGCAGAAGGA...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCTTCGGCGTCCACTGTaGACTCTGTCAGGAGAACCC +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGLRRPL*TLSGEP
Trigger: GGGTTCTCCTGACAGAGTGCACAGTGGACGCCGAAG...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGAGCAGCACCGTGCTaGCGTCTGCATCCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRGAAPC*RLHPAC
Trigger: ACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCC...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCGGAGCAGCACCGTGCTaGCGTCTGCATCCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASGAAPC*RLHPAC
Trigger: ACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCC...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGACCCAAATGTGTGCCTaGAGTTTCTGCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWTQMCA*SFCPAT
Trigger: AGTAGCTGGGCAGAAACTGCAGGCACACATTTGGGT...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCATCCACCCAAATGTGTaGCTGCAGTTTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSIHPNV*LQFLPS
Trigger: GCTGGGCAGAAACTGCAGGCACACATTTGGGTGGAT...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp GGGAACAGCCCCTTAGTTCTCGGCAAAGCGGCCCATACTGAGGCACACCATGAGACAGGCCTGGCAGGCTaGCTGGAAACTGTGCACCTT +
Preference number: 4 (lower is better)
Translates to: GNSPLVLGKAAHTEAHHETGLAG*LETVHL
Trigger: AAGGTGCACAGTTTCCAGGCAGCCTGCCAGGCCTGT...CTCATGGTGTGCCTCAGTATGGGCCGCTTTGCCGAGAACTAAGGGGCTGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR CCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCTCAGGTGCGTCTGTGTaGCTGCCGCGCTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVSGASV*LPRWMS
Trigger: ACTCATCCAGCGCGGCAGCCACACAGACGCACCTGA...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp ATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGATGGCGGCTCCAGAGCTCCGTCTGCAGGTTTaGGTTGGCGCCTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: MCSSVCPSDMVSLMAAPELRLQV*VGALLQ
Trigger: CTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAG...CTCTGGAGCCGCCATCAATGACACCATGTCGGATGGGCAGACGCTACTGCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCTCCGTCTGCAGGTTTaGGTTGGCGCCTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVLRLQV*VGALLQ
Trigger: CTGCAGCAAGGCGCCAACCCAAACCTGCAGACGGAG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAGGATGCGGCCTCCTTTaGCAGAGGCAGAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASGCGLL*QRQSFL
Trigger: GAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCC...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCCAGAGCCCAGCAGCTaGGCTGCGATCGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASPEPSS*AAIVCM
Trigger: CATGCACACGATCGCAGCCCAGCTGCTGGGCTCTGG...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GATGCGGCCTCCTTTGGCAGAGGCAGAGCTTCCTCCGTCTGCAGGTTTGGGTTGTGTCCTGCCGCTGTATaGCCATGTGCAGTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: DAASFGRGRASSVCRFGLCPAAV*PCAVAS
Trigger: AGACGCTACTGCACATGGCCATACAGCGGCAGGACA...CAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCATCAACTACGAGTaGAAGCTGGTTTCTGATGGC +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWGINYE*KLVSDG
Trigger: GCCATCAGAAACCAGCTTCCACTCGTAGTTGATGCC...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGTTCCCCTTCTCATCTaGCACAGACATGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSVPLLI*HRHVSS
Trigger: GGAGCTGACATGTCTGTGCCAGATGAGAAGGGGAAC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CGCCATGTGCAGTGGCGTCTGCAGATGGACGCTGTCCGCCAAGCTGGTCAGGGAAGATGGAGGGCAGTCTaGCGATGCTTGGTTAATTCG +
Preference number: 4 (lower is better)
Translates to: RHVQWRLQMDAVRQAGQGRWRAV*RCLVNS
Trigger: CGAATTAACCAAGCATCGCCAGACTGCCCTCCATCT...TCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTGCACATGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCGTGGGCAGGTCCTGCTaGGCAGCAAGATGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASVGRSC*AARWRA
Trigger: TGCCCTCCATCTTGCTGCCCAGCAGGACCTGCCCAC...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAGCTGGTGGCCCTTCATaGGGCAGGGCAAGCTACACA +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASAGGPS*GRASYT
Trigger: TGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGC...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCTCCCAGTCCATAGCTaGTCAGTACCATTGCTATCC +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGLPVHS*SVPLLS
Trigger: GGATAGCAATGGTACTGACCAGCTATGGACTGGGAG...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGGCCCAAAACTCCAAATaGAACACATGTTCTAACACA +
Preference number: 4 (lower is better)
Translates to: RWRTRGQGPWLVALHGAGAQNSK*NTCSNT
Trigger: TGTGTTAGAACATGTGTTCCATTTGGAGTTTTGGGC...CCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR TCA 90 bp TGTATGCCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATGCTTCTTCTGCAGCTTaGCATACTCCTGCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: CMPGAAPCCRLHPACPEDASSAA*HTPAAE
Trigger: TTCTGCGGCAGGAGTATGTCAAGCTGCAGAAGAAGC...ATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp GGTGCGTCTGTGTGGCTGCCGCGCTGGATGAGTCTGGCTGCAAAGCTGTTCTCATCCACATCAGCTTTGTaGCTAACCAGCGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GASVWLPRWMSLAAKLFSSTSAL*LTSVVA
Trigger: TGCCACCACGCTGGTTAGTCACAAAGCTGATGTGGA...TGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCTGTTCTCATCAAATaGAGTCCCATTTACCACGGG +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGAVLIK*SPIYHG
Trigger: CCCGTGGTAAATGGGACTTCATTTGATGAGAACAGC...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp CGCCATGTGCAGTGGCGTCTGCAGATGGACGCTGTCCGCCAAGCTGGTCAGGGAGCTGTTCTCATCAAATaGAGTCCCATTTACCACGGG +
Preference number: 4 (lower is better)
Translates to: RHVQWRLQMDAVRQAGQGAVLIK*SPIYHG
Trigger: CCCGTGGTAAATGGGACTTCATTTGATGAGAACAGC...TCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTGCACATGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCCGACATGGTGTCATTaGTGGCGGCTCCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASPTWCH*WRLQSP
Trigger: TGGGCTCTGGAGCCGCCATCAATGACACCATGTCGG...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGCTGTCTCCCCGTCCTaGGTCCTGACATTTATATCT +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSAVSPS*VLTFIS
Trigger: AGATATAAATGTCAGGACTCAGGACGGGGAGACAGC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCCCCGGACTCTCGTTTaGGAATGGCCTCGGCTGACT +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASPRTLV*EWPRLT
Trigger: AGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGG...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCTGCTGGGGAGGTaGCCAAGGACGTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRQLLGR*PRTWPG
Trigger: TCCAGGCCACGTCCTTGGTCACCTCCCCAGCAGCTG...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCGCCAGCTTCCTACGCTaGGAGGCTCTGCCTCATCAG +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASASFLR*EALPHQ
Trigger: CTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGC...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAGCCCAGCTGCACTCCTaGCACCTCAGTAGCATGAAC +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASAQLHS*HLSSMN
Trigger: GTTCATGCTACTGAGGTGTCAGGAGTGCAGCTGGGC...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCCGTCCTGAGTCCTGCTaGCATTTATATCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSRPESC*HLYLPG
Trigger: ACCAGGCAGATATAAATGTCAGCAGGACTCAGGACG...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574367.5
CDS-3UTR GCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTCTCCTTGTTTGCCTaGGCAGCCAAGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASLSLFA*AAKRAQ
Trigger: CTGCGCTCTCTTGGCTGCGCAGGCAAACAAGGAGAG...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TGCCGCTGTATGGCCATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGCTCTCCTTGTTTGCCTaGGCAGCCAAGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: CRCMAMCSSVCPSDMVSLLSLFA*AAKRAQ
Trigger: CTGCGCTCTCTTGGCTGCGCAGGCAAACAAGGAGAG...CAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCTGCAGAAGGGCCTCTaGAATCTGCGCCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGLQKGL*NLRHLR
Trigger: TCTGAGATGGCGCAGATTGCAGAGGCCCTTCTGCAG...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCGGGTTGGCACCAGCCTaGAGAAGGGCCTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASGLAPA*RRASAI
Trigger: GATTGCAGAGGCCCTTCTGCAGGCTGGTGCCAACCC...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGTGTGATATGCTGCACTaGCAGCCACAGAGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGCDMLH*QPQSRA
Trigger: AGCACGGCTCTGTGGCTGGCAGTGCAGCATATCACA...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGAAGACACTGTGATATaGTGCACTGCCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSEDTVI*CTASHR
Trigger: TCTGTGGCTGGCAGTGCAGCATATCACAGTGTCTTC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCAGGAAAAGAGCTGCTaGCTCGTTTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGQEKSC*LVSCSS
Trigger: GCTGGAGCAGGAAACGAGGCAGCAGCTCTTTTCCTG...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp ATGTTGGGGTTGGCACCAGCCTGCAGAAGGGCCTCTGCAATCTGCGCCATCTCAATGGGCACCGTTGGTTaGCAGGAAAAGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MLGLAPACRRASAICAISMGTVG*QEKSCC
Trigger: GCAGCAGCTCTTTTCCTGGCAACCAACGGTGCCCAT...TGAGATGGCGCAGATTGCAGAGGCCCTTCTGCAGGCTGGTGCCAACCCCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCAGGTTGGCCAGGCCATaGCGACACGCTGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASRLARP*RHAVCN
Trigger: GTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCT...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCTTTGGGTTGGCGCCTTaGTGCAGGAGCTCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASFGLAP*CRSSAV
Trigger: CACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAA...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TGCCGCTGTATGGCCATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGAGAGCTTCCTCCGTCTaGAGGTTTGGGTTGGCGCCT +
Preference number: 4 (lower is better)
Translates to: CRCMAMCSSVCPSDMVSLRASSV*RFGLAP
Trigger: AGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCT...CAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTATGTGCAGTGGCGTCTaGAGATGGACGCTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRMCSGV*RWTLSA
Trigger: GGCGGACAGCGTCCATCTGCAGACGCCACTGCACAT...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGTGGGCTGCGATCGTGTaGATGCCAGTCCATAATGCC +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGWAAIV*MPVHNA
Trigger: GGCATTATGGACTGGCATGCACACGATCGCAGCCCA...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCGGAAGAGTGCGCTCTTaGTGTCCTGCCGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVGRVRS*CPAAVW
Trigger: CCATACAGCGGCAGGACAGCAAGAGCGCACTCTTCC...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGTATTGTCCCAAAATGTaGAGTGGTGACTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWYCPKM*SGDWPL
Trigger: CAGAGGCCAGTCACCACTGCACATTTTGGGACAATA...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGATCGTTCCAGTCTATTaGCGCAGGAAGACACCCGCC +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGIVPVY*RRKTPA
Trigger: GGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGAT...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AAACCTAGATGGAGGTCAAGCTCTCCCCTTTCCCAAGACGTTCCCTCCACTCCGAGTGGCGTCTGCAGATaGACGCTGTCCGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: KPRWRSSSPLSQDVPSTPSGVCR*TLSAKL
Trigger: CAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACT...CGGAGTGGAGGGAACGTCTTGGGAAAGGGGAGAGCTTGACCTCCATCTAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR CCA 90 bp CACCACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTGGCGTCTGCAGATGGATCGCCATGTGCAGTaGCGTCTGCAGATGGACGCT +
Preference number: 4 (lower is better)
Translates to: HHIRMVIGDRHVQWRLQMDRHVQ*RLQMDA
Trigger: AGCGTCCATCTGCAGACGCCACTGCACATGGCGATC...CATCTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp CGCCATGTGCAGTGGCGTCTGCAGATGGACGCTGTCCGCCAAGCTGGTCAGGGAATGTGCAGTGGTGACTaGCCTCTGAGATTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: RHVQWRLQMDAVRQAGQGMCSGD*PLRLKA
Trigger: AGCCTTTAATCTCAGAGGCCAGTCACCACTGCACAT...TCCCTGACCAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACTGCACATGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp CGGCCCTTGTTATCCACCTGCTCAGCAGCCCCGGACTCTCGTTTGAGAATGGCCTGGCGCGGCACAAGTTaGCGTTCCCTTTCATGTATG +
Preference number: 4 (lower is better)
Translates to: RPLLSTCSAAPDSRLRMAWRGTS*RSLSCM
Trigger: CATACATGAAAGGGAACGCCAACTTGTGCCGCGCCA...GGCCATTCTCAAACGAGAGTCCGGGGCTGCTGAGCAGGTGGATAACAAGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGAAGATGTTGACTCCCTaGTTGTTATTCACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGKMLTP*LLFTPR
Trigger: CCTCGGGGTGAATAACAACCAGGGAGTCAACATCTT...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGTTGGTCGAGCATTTATaGCAAAGAAGACGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWLVEHL*QRRRPQ
Trigger: CTGCGGACGTCTTCTTTGCCATAAATGCTCGACCAA...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGGACCCATTCAGGGACAAGAGTGAGGACACAGAACGGGGTGGTCAGAAATGACGAGCAGAGCAGCTGCTaGGGAGGTGACCAAGGACGT +
Preference number: 4 (lower is better)
Translates to: GTHSGTRVRTQNGVVRNDEQSSC*GGDQGR
Trigger: ACGTCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTC...GTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR CCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCACTTCCAAAGTAAGGTaGCGCACACGTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVTSKVR*RTRGQG
Trigger: GCCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGT...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGCTGCCTGCTTCCTTATaGCCCTTTCCAGGTAATAGA +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWLPASL*PFPGNR
Trigger: TCTATTACCTGGAAAGGGCCATAAGGAAGCAGGCAG...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCCTCCCAGTCCATAGCTaGTCAGTACCATTGCTATCC +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSLPVHS*SVPLLS
Trigger: GGATAGCAATGGTACTGACCAGCTATGGACTGGGAG...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACAGGGCAGGGCATGTTaGAGTCAGCTCCCACTCAAG +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASQGRAC*SQLPLK
Trigger: CTTGAGTGGGAGCTGACTCCAACATGCCCTGCCCTG...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR CAA 72 bp ACATGTAAAGGAGTCCTCCCCTTGCTGTCCTGCATGTaGGGGTTGGCACCAGCCTGCAGAAGGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TCKGVLPLLSCM*GLAPACRRASA
Trigger: TGCAGAGGCCCTTCTGCAGGCTGGTGCCAACCCCAACATGCAGGACAGCAAGGGGAGGACTCCTTTACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 72 bp ATATCTGCCTGGTGCTCCAGCAGGAAGAGTGCGCTCTaGCTGTCCTGCCGCTGTATGGCCATGTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: ISAWCSSRKSAL*LSCRCMAMCSS
Trigger: GCTACTGCACATGGCCATACAGCGGCAGGACAGCAAGAGCGCACTCTTCCTGCTGGAGCACCAGGCAGATAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCCTGAGGAGCTGTAGCTaGAACCGATTTGCTAGTTTC +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSLRSCS*NRFASF
Trigger: GAAACTAGCAAATCGGTTTCAGCTACAGCTCCTCAG...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp ACCGTGTTGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGTCTCACATCTCTCCCTaGGGAGCTGTAGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: TVLAADGHVDGGSSFCILSHISP*GAVAET
Trigger: GGTTTCAGCTACAGCTCCTCAGGGAGAGATGTGAGA...CAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCAACACGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGCTCAGGTCGTCCCAATaGCTTGCAATAATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWLRSSQ*LAIISA
Trigger: TGCAGAAATTATTGCAAGTCATTGGGACGACCTGAG...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGCTCAGGTCGTCCCAATaGCTTGCAATAATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGLRSSQ*LAIISA
Trigger: TGCAGAAATTATTGCAAGTCATTGGGACGACCTGAG...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAATTTTGTATAACAACTaGGCGCTCATGCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VRWRTRGQGPWLVALHGAILYNN*ALMLLK
Trigger: TTTCAGCAGCATGAGCGCTCAGTTGTTATACAAAAT...TGCCCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TGCCGCTGTATGGCCATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGGGTCAGAAGACACTGTaGTATGCTGCACTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CRCMAMCSSVCPSDMVSLGQKTL*YAALPA
Trigger: GGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACC...CAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCTTTCTGCTCCAGGATaGCAGACACCACATCCGGAT +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGLSAPG*QTPHPD
Trigger: ATCCGGATGTGGTGTCTGTCATCCTGGAGCAGAAAG...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCACATGGATGCGCCCTaGAGCCAATGGAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGHMDAP*SQWKTG
Trigger: TCCTGTTTTCCATTGGCTTCAGGGCGCATCCATGTG...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCCACTGTGCACTCTGTCAGGAGAACCCGGATGTTGTTGAGCCGGCCGTGCATGTCCGCCAGCTTCTTCTaGAGCTTGACATACTCCTGC +
Preference number: 4 (lower is better)
Translates to: STVHSVRRTRMLLSRPCMSASFF*SLTYSC
Trigger: GCAGGAGTATGTCAAGCTGCAGAAGAAGCTGGCGGA...CATGCACGGCCGGCTCAACAACATCCGGGTTCTCCTGACAGAGTGCACAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp ACCGTGTTGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGGGCATTCAGCTCCTCTaGCGTCTGGTAGAAGCGAAT +
Preference number: 4 (lower is better)
Translates to: TVLAADGHVDGGSSFCILGIQLL*RLVEAN
Trigger: ATTCGCTTCTACCAGACGGCAGAGGAGCTGAATGCC...CAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCAACACGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp AGCCCCCGACCGGACGATGGCGCGGCACAAGTTGGCGTTCCCTTTCATGTATGCAGTAGTTCATCAGTGTaGTGGCATTCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SPRPDDGAAQVGVPFHVCSSSSV*WHSAPL
Trigger: CAGAGGAGCTGAATGCCAGCACACTGATGAACTACT...GCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTCTCCCCTTGCTGTCCTaGATGTTGGGGTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRLPLLS*MLGLAP
Trigger: TGGTGCCAACCCCAACATGCAGGACAGCAAGGGGAG...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCTGTGATATGCTGCACTaGCAGCCACAGAGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVCDMLH*QPQSRA
Trigger: AGCACGGCTCTGTGGCTGGCAGTGCAGCATATCACA...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAGACACTGTGATATGCTaGACTGCCAGCCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASDTVIC*TASHRA
Trigger: GGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTC...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAAGGTTGGCCAGGCCATaGCGACACGCTGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASRLARP*RHAVCN
Trigger: GTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCT...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGTTCTGAACTGCCACATGAAGGAAATTCCGGCCCTTGTTATCCACCTGCTCAGGGGTTGGCGCCTTGCTaGAGGAGCTCTGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSELPHEGNSGPCYPPAQGLAPC*RSSAVR
Trigger: CCTCACGGCAGAGCTCCTGCAGCAAGGCGCCAACCC...CTGAGCAGGTGGATAACAAGGGCCGGAATTTCCTTCATGTGGCAGTTCAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGTTTGGGTTGGCGCCTTaGTGCAGGAGCTCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLFGLAP*CRSSAV
Trigger: CACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAA...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TGTATGCCAGGAGCAGCACCGTGCTGCCGTCTGCATCCGGCTTGTCCAGAGGATAGAGCATTGGCTTTCTaGTCCAGGATGACAGACACC +
Preference number: 4 (lower is better)
Translates to: CMPGAAPCCRLHPACPEDRALAF*SRMTDT
Trigger: GGTGTCTGTCATCCTGGAGCAGAAAGCCAATGCTCT...ATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGGCATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp TCCACTGTGCACTCTGTCAGGAGAACCCGGATGTTGTTGAGCCGGCCGTGCATGATGTGCAGTAGCGTCTaGCCATCCGACATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: STVHSVRRTRMLLSRPCMMCSSV*PSDMVS
Trigger: TGACACCATGTCGGATGGGCAGACGCTACTGCACAT...CATGCACGGCCGGCTCAACAACATCCGGGTTCTCCTGACAGAGTGCACAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGAAGAGTGCGCTCTTaGTGTCCTGCCGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRGRVRS*CPAAVW
Trigger: CCATACAGCGGCAGGACAGCAAGAGCGCACTCTTCC...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GTCCACATCAGCTTTGTGACTAACCAGCGTGGTGGCAATACTCTCCAGTCGTCGATGGTGGGCAGGTCCTaGTGGGCAGCAAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: VHISFVTNQRGGNTLQSSMVGRS*WAARWR
Trigger: CCTCCATCTTGCTGCCCAGCAGGACCTGCCCACCAT...CGACGACTGGAGAGTATTGCCACCACGCTGGTTAGTCACAAAGCTGATGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GGGACCCATTCAGGGACAAGAGTGAGGACACAGAACGGGGTGGTCAGAAATGACCTTCGGCGTCCACTGTaGACTCTGTCAGGAGAACCC +
Preference number: 4 (lower is better)
Translates to: GTHSGTRVRTQNGVVRNDLRRPL*TLSGEP
Trigger: GGGTTCTCCTGACAGAGTGCACAGTGGACGCCGAAG...GTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCATATTGTCCCAAAATGTaGAGTGGTGACTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAYCPKM*SGDWPL
Trigger: CAGAGGCCAGTCACCACTGCACATTTTGGGACAATA...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCTATTGTCCCAAAATGTaGAGTGGTGACTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSYCPKM*SGDWPL
Trigger: CAGAGGCCAGTCACCACTGCACATTTTGGGACAATA...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGAGGATACCCCGGCATaGATTCTAGGAAGAGATCAA +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSEDTPA*ILGRDQ
Trigger: TTGATCTCTTCCTAGAATGCATGCCGGGGTATCCTC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp ATGTTGGGGTTGGCACCAGCCTGCAGAAGGGCCTCTGCAATCTGCGCCATCTCAGTTCCCTTTCATGTATaGCAGGAGCAGCACCGTGCT +
Preference number: 4 (lower is better)
Translates to: MLGLAPACRRASAICAISVPFHV*QEQHRA
Trigger: AGCACGGTGCTGCTCCTGGCATACATGAAAGGGAAC...TGAGATGGCGCAGATTGCAGAGGCCCTTCTGCAGGCTGGTGCCAACCCCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGGTTCCCTTTCATGTATaGCAGGAGCAGCACCGTGCT +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGVPFHV*QEQHRA
Trigger: AGCACGGTGCTGCTCCTGGCATACATGAAAGGGAAC...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAATCGTTCCAGTCTATTaGCGCAGGAAGACACCCGCC +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASIVPVY*RRKTPA
Trigger: GGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGAT...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTTACGCTGAGAGGCTCTaGCTCATCAGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRYAERL*LISQPR
Trigger: CCTGGGCTGACTGATGAGGCAGAGCCTCTCAGCGTA...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGAAGGGGTTCACAGACTaGTCAGAAGACACTGTGATA +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWKGFTD*SEDTVI
Trigger: TATCACAGTGTCTTCTGACCAGTCTGTGAACCCCTT...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TCCCCTTCTCATCTGGCACAGACATGTCAGCTCCTCGGGTGCATATGGCATCAAGTGTGGCTGCCGCGCTaGATGAGTCTGGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SPSHLAQTCQLLGCIWHQVWLPR*MSLAAK
Trigger: CTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACAC...TTGATGCCATATGCACCCGAGGAGCTGACATGTCTGTGCCAGATGAGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAAGTGGCGTCTGCAGATaGACGCTGTCCGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASSGVCR*TLSAKL
Trigger: CAGCTTGGCGGACAGCGTCCATCTGCAGACGCCACT...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGTCTGCAAGTTGTTGGTaGCATGAAGAGCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWSASCW*HEEHWL
Trigger: AAGCCAATGCTCTTCATGCCACCAACAACTTGCAGA...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCCAGGCCATGCCGACACGCTGTGTGCAACGGGGTTTCTCCCCACTTGTTTCTGGCATCAACTACGAGTaGAAGCTGGTTTCTGATGGC +
Preference number: 4 (lower is better)
Translates to: GQAMPTRCVQRGFSPLVSGINYE*KLVSDG
Trigger: GCCATCAGAAACCAGCTTCCACTCGTAGTTGATGCC...AGAAACAAGTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGGTTCCCCTTCTCATCTaGCACAGACATGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGVPLLI*HRHVSS
Trigger: GGAGCTGACATGTCTGTGCCAGATGAGAAGGGGAAC...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCCGTTGTTTTCATCAATaGCTCTGTGCAGGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSRCFHQ*LCAGAS
Trigger: AGACGCTCCTGCACAGAGCCATTGATGAAAACAACG...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCTGCTGATGGCCACGTaGATGGGGGTTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVLLMAT*MGVLPS
Trigger: AGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGAATTCACATTAGCGTaGACACTGATCAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: QSKVAHTWPGPLAGGPSWEFTLA*TLIRNS
Trigger: GCTGTTCCTGATCAGTGTCCACGCTAATGTGAATTC...CCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCGGAGGACTGAGCAGATaGTGGGCAGGTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRGGLSR*WAGPAG
Trigger: CCCAGCAGGACCTGCCCACCATCTGCTCAGTCCTCC...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCAATGTGCAGTGGTGACTaGCCTCTGAGATTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAMCSGD*PLRLKA
Trigger: AGCCTTTAATCTCAGAGGCCAGTCACCACTGCACAT...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR CCA 90 bp CACCACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTGGCGTCTGCAGATGACCACGGAGGCTCCTTaGACAGCATATCCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: HHIRMVIGDRHVQWRLQMTTEAP*TAYPAV
Trigger: GACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGT...CATCTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGCCACCCCGAAGGGGCTaGAAGCCAGGTGATCCACCC +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMPPRRG*KPGDPP
Trigger: GGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGG...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR CCA 90 bp CTCATCCCTCCATTTGGTCAAGGTTTGCCCATCAATGTGCAGGACCCAGGCAAGAGGATGGCACAGGCCTaGCAGGCTGCCTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: LIPPFGQGLPINVQDPGKRMAQA*QAAWKL
Trigger: CAGTTTCCAGGCAGCCTGCCAGGCCTGTGCCATCCT...CTTGCCTGGGTCCTGCACATTGATGGGCAAACCTTGACCAAATGGAGGGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
3UTR CAA 72 bp GGGGTGAGAAACCAACAGCTGAATGATGACACCGTGTaGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GVRNQQLNDDTV*AADGHVDGGSS
Trigger: GGAAGAACCCCCATCCACGTGGCCATCAGCAGCCAACACGGTGTCATCATTCAGCTGTTGGTTTCTCACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGCCAGGACAAACTTGTaGGCACTGATGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRARTNL*ALMCLS
Trigger: GGACAGGCACATCAGTGCTCACAAGTTTGTCCTGGC...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCGCCAGGACAAACTTGTaGGCACTGATGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASARTNL*ALMCLS
Trigger: GGACAGGCACATCAGTGCTCACAAGTTTGTCCTGGC...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCATCTCACATCTCTCCCTaGGGAGCTGTAGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASSHISP*GAVAET
Trigger: GGTTTCAGCTACAGCTCCTCAGGGAGAGATGTGAGA...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCGAGCGCTCATGCTGCTaGAATCCTCCTTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASERSCC*NPPSSG
Trigger: ACCTGAGGAAGGAGGATTTCAGCAGCATGAGCGCTC...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGACTGCAGCAGCTGACTaGACACATATTCATTCCCGG +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGTAAAD*THIHSR
Trigger: CCGGGAATGAATATGTGTTCAGTCAGCTGCTGCAGT...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGGACCCATTCAGGGACAAGAGTGAGGACACAGAACGGGGTGGTCAGAAATGACGGTCAGAAGACACTGTaGTATGCTGCACTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GTHSGTRVRTQNGVVRNDGQKTL*YAALPA
Trigger: GGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACC...GTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCGGTCAGAAGACACTGTaGTATGCTGCACTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASGQKTL*YAALPA
Trigger: GGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACC...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGTTCTGAACTGCCACATGAAGGAAATTCCGGCCCTTGTTATCCACCTGCTCAGGGCTGCCGCGCTGGATaGGTCTGGCTGCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSELPHEGNSGPCYPPAQGCRAG*VWLQSC
Trigger: ACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCC...CTGAGCAGGTGGATAACAAGGGCCGGAATTTCCTTCATGTGGCAGTTCAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp ATGTTGGGGTTGGCACCAGCCTGCAGAAGGGCCTCTGCAATCTGCGCCATCTCAACTTGTTTCTGTGGTTaGCATGGGCACCGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: MLGLAPACRRASAICAISTCFCG*HGHRWL
Trigger: CAACCAACGGTGCCCATGTCAACCACAGAAACAAGT...TGAGATGGCGCAGATTGCAGAGGCCCTTCTGCAGGCTGGTGCCAACCCCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCGTGGAAGCTGGTTTCTaGTGGCCAGCTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRVEAGF*WPAGGL
Trigger: CAGCCCTCCAGCTGGCCATCAGAAACCAGCTTCCAC...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCATCACAGCCATGTCTaGCCAGAGTGGATGCGATGT +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVHHSHV*PEWMRC
Trigger: ACATCGCATCCACTCTGGTCAGACATGGCTGTGATG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGACACCACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTGGCGTCTGCAGGCGGACAATAATTTCTaGGCCTGCTTGGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: RHHIRMVIGDRHVQWRLQADNNF*ACLDSE
Trigger: CTCGCTGTCCAAGCAGGCTCAGAAATTATTGTCCGC...CTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTAGAAGACGTCCGCAGTaGCGACAGTGGTGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRRRRPQ*RQWCLR
Trigger: TCGCAAACACCACTGTCGTCACTGCGGACGTCTTCT...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTAGCAAGACGAGAGAATaGGACGGCTGCTACGAGGTG +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRSKTRE*DGCYEV
Trigger: CACCTCGTAGCAGCCGTCTCATTCTCTCGTCTTGCT...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCAACAGCAGAGTGACTaGGGACTCCACAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASQQQSD*GLHRQD
Trigger: GTCCTGTCTGTGGAGTCCTCAGTCACTCTGCTGTTG...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAGGGCTGAAGCCTTGGTaGCTCCCCCTCTCATCACTT +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASGLKPW*LPLSSL
Trigger: AAGTGATGAGAGGGGGAGTCACCAAGGCTTCAGCCC...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCTTTGTACGCAAGTGTTaGCAGCAGGGAGAGCACGGG +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASFVRKC*QQGEHG
Trigger: CCCGTGCTCTCCCTGCTGTCAACACTTGCGTACAAA...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCTCCGCCAGCTTCTTCTaGAGCTTGACATACTCCTGC +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVSASFF*SLTYSC
Trigger: GCAGGAGTATGTCAAGCTGCAGAAGAAGCTGGCGGA...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCACTCTCCTTGTTTGCCTaGGCAGCCAAGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASLSLFA*AAKRAQ
Trigger: CTGCGCTCTCTTGGCTGCGCAGGCAAACAAGGAGAG...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCTGCTCGTAGAGGTCTaGCACGATGGCCAGCAGACG +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRLLVEV*HDGQQT
Trigger: CGTCTGCTGGCCATCGTGGCAGACCTCTACGAGCAG...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCGGCATTCAGCTCCTCTaGCGTCTGGTAGAAGCGAAT +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVGIQLL*RLVEAN
Trigger: ATTCGCTTCTACCAGACGGCAGAGGAGCTGAATGCC...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGGACCCATTCAGGGACAAGAGTGAGGACACAGAACGGGGTGGTCAGAAATGACTACAAGGCCACAAGGTaGAGTGGTGTCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GTHSGTRVRTQNGVVRNDYKATR*SGVSWA
Trigger: TGCCCAGGAGACACCACTGCACCTTGTGGCCTTGTA...GTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCACTCCCCTTGCTGTCCTaGATGTTGGGGTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASLPLLS*MLGLAP
Trigger: TGGTGCCAACCCCAACATGCAGGACAGCAAGGGGAG...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGCTCCCCTTGCTGTCCTaGATGTTGGGGTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLLPLLS*MLGLAP
Trigger: TGGTGCCAACCCCAACATGCAGGACAGCAAGGGGAG...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCAGCAGCCCCGGACTCTCGTTTGAGAATGGCCTCGGCTGACTTGTTGTTCTTGGACACTGTGATATGCTaGACTGCCAGCCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: SAAPDSRLRMASADLLFLDTVIC*TASHRA
Trigger: GGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTC...CAAGAACAACAAGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGGCTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp AAACCTAGATGGAGGTCAAGCTCTCCCCTTTCCCAAGACGTTCCCTCCACTCCGCAGGAAAAGAGCTGCTaGCTCGTTTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KPRWRSSSPLSQDVPSTPQEKSC*LVSCSS
Trigger: GCTGGAGCAGGAAACGAGGCAGCAGCTCTTTTCCTG...CGGAGTGGAGGGAACGTCTTGGGAAAGGGGAGAGCTTGACCTCCATCTAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCTGCCGACACGCTGTGTaGAACGGGGTTTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRCRHAV*NGVSPH
Trigger: GTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCA...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GTTTCTCCCCACTTGTTTCTGTGGTTGACATGGGCACCGTTGGTTGCCAGGAAAAGGTTGGCCAGGCCATaGCGACACGCTGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: VSPHLFLWLTWAPLVARKRLARP*RHAVCN
Trigger: GTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCT...TTTCCTGGCAACCAACGGTGCCCATGTCAACCACAGAAACAAGTGGGGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAAGAGCTTCCTCCGTCTaGAGGTTTGGGTTGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASRASSV*RFGLAP
Trigger: AGGCGCCAACCCAAACCTGCAGACGGAGGAAGCTCT...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCATGTGCAGTAGCGTCTaGCCATCCGACATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVMCSSV*PSDMVS
Trigger: TGACACCATGTCGGATGGGCAGACGCTACTGCACAT...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAATGTGCAGTAGCGTCTaGCCATCCGACATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASMCSSV*PSDMVS
Trigger: TGACACCATGTCGGATGGGCAGACGCTACTGCACAT...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GTCCACATCAGCTTTGTGACTAACCAGCGTGGTGGCAATACTCTCCAGTCGTCGCGCTGTATGGCCATGTaGAGTAGCGTCTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: VHISFVTNQRGGNTLQSSRCMAM*SSVCPS
Trigger: GGATGGGCAGACGCTACTGCACATGGCCATACAGCG...CGACGACTGGAGAGTATTGCCACCACGCTGGTTAGTCACAAAGCTGATGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGCGCTGTATGGCCATGTaGAGTAGCGTCTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLRCMAM*SSVCPS
Trigger: GGATGGGCAGACGCTACTGCACATGGCCATACAGCG...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAGGAAGAGTGCGCTCTTaGTGTCCTGCCGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASGRVRS*CPAAVW
Trigger: CCATACAGCGGCAGGACAGCAAGAGCGCACTCTTCC...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGTGTCAGCTCCTCGGGTaGATATGGCATCAACTACGA +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGCQLLG*IWHQLR
Trigger: TCGTAGTTGATGCCATATGCACCCGAGGAGCTGACA...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGTGCGTCTGTGTGGCTGCCGCGCTGGATGAGTCTGGCTGCAAAGCTGTTCTCAAGGGCAGTCTGGCGATaGTTGGTTAATTCGTTCACT +
Preference number: 4 (lower is better)
Translates to: GASVWLPRWMSLAAKLFSRAVWR*LVNSFT
Trigger: AGTGAACGAATTAACCAAGCATCGCCAGACTGCCCT...TGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGGGAGCAGCACCGTGCTaGCGTCTGCATCCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMGAAPC*RLHPAC
Trigger: ACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCC...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCATGGAAACTGACCACATaGCTCACATGGCCAAATGTT +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAWKLTT*LTWPNV
Trigger: AACATTTGGCCATGTGAGGCATGTGGTCAGTTTCCA...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATGTGCCTGCAGTTTCTaGCCAGCTACTGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASCACSF*PATAPP
Trigger: AGGAGGGGCAGTAGCTGGGCAGAAACTGCAGGCACA...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp GGGAACAGCCCCTTAGTTCTCGGCAAAGCGGCCCATACTGAGGCACACCATGAGGTTTGCCCATCAATGTaGAGGACCCAGGCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: GNSPLVLGKAAHTEAHHEVCPSM*RTQASS
Trigger: TGAACTTGCCTGGGTCCTGCACATTGATGGGCAAAC...CTCATGGTGTGCCTCAGTATGGGCCGCTTTGCCGAGAACTAAGGGGCTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR GCA 90 bp CTCATCCCTCCATTTGGTCAAGGTTTGCCCATCAATGTGCAGGACCCAGGCAAGGCTGCCTGGAAACTGTaGACCTTCAGCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LIPPFGQGLPINVQDPGKAAWKL*TFSLQQ
Trigger: CTGCTGGAGGCTGAAGGTGCACAGTTTCCAGGCAGC...CTTGCCTGGGTCCTGCACATTGATGGGCAAACCTTGACCAAATGGAGGGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR CCA 90 bp TTCCTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGGGCCACAAGGTGCAGTaGTGTCTCCTGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: FLVPATVTWEVSVSLPFRGHKVQ*CLLGTQ
Trigger: CTGGGTGCCCAGGAGACACCACTGCACCTTGTGGCC...CCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR CCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGGCCGTGCTGCCCTCGTaGTCTTTGAGTTCTAAATCT +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGAVLPS*SLSSKS
Trigger: AGATTTAGAACTCAAAGACCACGAGGGCAGCACGGC...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCTCAGGTGCGTCTGTGTaGCTGCCGCGCTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRSGASV*LPRWMS
Trigger: ACTCATCCAGCGCGGCAGCCACACAGACGCACCTGA...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACCCCACTTGTTTCTGTaGTTGACATGGGCACCGTTG +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASPHLFL*LTWAPL
Trigger: CAACGGTGCCCATGTCAACCACAGAAACAAGTGGGG...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TTGTTCTTGAAAGTCATGGCACAGGCAAACGGGGTCAGCCCTTGTCTGTCTCGTGGATGCGGCCTCCTTTaGCAGAGGCAGAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LFLKVMAQANGVSPCLSRGCGLL*QRQSFL
Trigger: GAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCC...ACGAGACAGACAAGGGCTGACCCCGTTTGCCTGTGCCATGACTTTCAAGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCTCTGCAAGTTGTTGGTaGCATGAAGAGCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSSASCW*HEEHWL
Trigger: AAGCCAATGCTCTTCATGCCACCAACAACTTGCAGA...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTAGGCCCAGCACAGTCTaGTCTCGGGAATCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRRPSTV*SRESLR
Trigger: CCTCAAAGATTCCCGAGACCAGACTGTGCTGGGCCT...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCTGTCCTGCCGCTGTATaGCCATGTGCAGTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASCPAAV*PCAVAS
Trigger: AGACGCTACTGCACATGGCCATACAGCGGCAGGACA...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGGGCATCAACTACGAGTaGAAGCTGGTTTCTGATGGC +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGGINYE*KLVSDG
Trigger: GCCATCAGAAACCAGCTTCCACTCGTAGTTGATGCC...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGTGGCGCCTGGTTGTCTaGGACTGTTCACGTCACAGC +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLWRLVV*DCSRHS
Trigger: GCTGTGACGTGAACAGTCCCAGACAACCAGGCGCCA...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATGGCGCCTGGTTGTCTaGGACTGTTCACGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASWRLVV*DCSRHS
Trigger: GCTGTGACGTGAACAGTCCCAGACAACCAGGCGCCA...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTCTGCTGATGGCCACGTaGATGGGGGTTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRLLMAT*MGVLPS
Trigger: AGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAG...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCGAATTCACATTAGCGTaGACACTGATCAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSEFTLA*TLIRNS
Trigger: GCTGTTCCTGATCAGTGTCCACGCTAATGTGAATTC...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGGTGGGCAGGTCCTGCTaGGCAGCAAGATGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMVGRSC*AARWRA
Trigger: TGCCCTCCATCTTGCTGCCCAGCAGGACCTGCCCAC...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCCAGGCCATGCCGACACGCTGTGTGCAACGGGGTTTCTCCCCACTTGTTTCTAAGATGTTGACTCCCTaGTTGTTATTCACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: GQAMPTRCVQRGFSPLVSKMLTP*LLFTPR
Trigger: CCTCGGGGTGAATAACAACCAGGGAGTCAACATCTT...AGAAACAAGTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCGAGCAGAGCAGCTGCTaGGGAGGTGACCAAGGACGT +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTREQSSC*GGDQGR
Trigger: ACGTCCTTGGTCACCTCCCCAGCAGCTGCTCTGCTC...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCTACTGGAAGGGGAAATaGTTTTCCAAGTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSYWKGK*FSKCPC
Trigger: ACAGGGACACTTGGAAAACCATTTCCCCTTCCAGTA...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCAAGCTACACAGAACTaGGACCAACAGCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVQATQN*DQQHSQ
Trigger: CTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGGGCCCTTGGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGGGCTTCCTAAGTCTGTaGAAAGAGGCTTTTCCTATA +
Preference number: 4 (lower is better)
Translates to: RALGWWPFMGQGKLHRTGGFLSL*KEAFPI
Trigger: TATAGGAAAAGCCTCTTTCCACAGACTTAGGAAGCC...CCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCCAAGGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
3UTR CAA 72 bp GCCCCGGACTCTCGTTTGAGAATGGCCTCGGCTGACTaGTTGTTCTTGAAAGTCATGGCACAGGCAAACGGG +
Preference number: 4 (lower is better)
Translates to: APDSRLRMASAD*LFLKVMAQANG
Trigger: CCCGTTTGCCTGTGCCATGACTTTCAAGAACAACAAGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCTCTCACATCTCTCCCTaGGGAGCTGTAGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASSHISP*GAVAET
Trigger: GGTTTCAGCTACAGCTCCTCAGGGAGAGATGTGAGA...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCGCCAGATCTCCGTTATaGTCCGCTTCATTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVARSPL*SASFSF
Trigger: GAAGCTGAATGAAGCGGATCATAACGGAGATCTGGC...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGGGTCAGAAGACACTGTaGTATGCTGCACTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLGQKTL*YAALPA
Trigger: GGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACC...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGGCTGTTCTCATCAAATaGAGTCCCATTTACCACGGG +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGAVLIK*SPIYHG
Trigger: CCCGTGGTAAATGGGACTTCATTTGATGAGAACAGC...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTGTCCCTGTATGTTGCTAGCAGAATGGGGAGAGGTCTAATTCCTAATCACATTGCAGGAGCTCTGCCGTaGGGTTGGCCAGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: VSLYVASRMGRGLIPNHIAGALP*GWPGHA
Trigger: GGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGC...AATGTGATTAGGAATTAGACCTCTCCCCATTCTGCTAGCAACATACAGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCTTTCTGCTCCAGGATaGCAGACACCACATCCGGAT +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASLSAPG*QTPHPD
Trigger: ATCCGGATGTGGTGTCTGTCATCCTGGAGCAGAAAG...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TCCACTGTGCACTCTGTCAGGAGAACCCGGATGTTGTTGAGCCGGCCGTGCATGAAGTTGTTGGTGGCATaGAGAGCATTGGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: STVHSVRRTRMLLSRPCMKLLVA*RALAFC
Trigger: GCAGAAAGCCAATGCTCTTCATGCCACCAACAACTT...CATGCACGGCCGGCTCAACAACATCCGGGTTCTCCTGACAGAGTGCACAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGAAGTTGTTGGTGGCATaGAGAGCATTGGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGKLLVA*RALAFC
Trigger: GCAGAAAGCCAATGCTCTTCATGCCACCAACAACTT...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTCCCCGTCCTGAGTCCTaGCATTTATATCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRPRPES*HLYLPG
Trigger: ACCAGGCAGATATAAATGTCAGGACTCAGGACGGGG...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCGCGGACAATAATTTCTaGGCCTGCTTGGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASADNNF*ACLDSE
Trigger: CTCGCTGTCCAAGCAGGCTCAGAAATTATTGTCCGC...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTCCACATCAGCTTTGTGACTAACCAGCGTGGTGGCAATACTCTCCAGTCGTCGAGAAGACGTCCGCAGTaGCGACAGTGGTGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: VHISFVTNQRGGNTLQSSRRRPQ*RQWCLR
Trigger: TCGCAAACACCACTGTCGTCACTGCGGACGTCTTCT...CGACGACTGGAGAGTATTGCCACCACGCTGGTTAGTCACAAAGCTGATGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGGCCAGCTTCCTACGCTaGGAGGCTCTGCCTCATCAG +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMASFLR*EALPHQ
Trigger: CTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGC...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGCAACAGCAGAGTGACTaGGGACTCCACAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLQQQSD*GLHRQD
Trigger: GTCCTGTCTGTGGAGTCCTCAGTCACTCTGCTGTTG...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTTCTCCAACAGCAGAGTaGCTGAGGACTCCACAGACA +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRSPTAE*LRTPQT
Trigger: TGTCTGTGGAGTCCTCAGTCACTCTGCTGTTGGAGA...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCGAGATTCGTGTGAGCTaGGGTCCAGTCAAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVEIRVS*GPVKAD
Trigger: ATCAGCTTTGACTGGACCTCAGCTCACACGAATCTC...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGCTATCCAGAAAAGAATaGACAAAGAACAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGLSRKE*TKNRLL
Trigger: CAACAGCCTGTTCTTTGTTCATTCTTTTCTGGATAG...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGGACCCATTCAGGGACAAGAGTGAGGACACAGAACGGGGTGGTCAGAAATGACCACATGGATGCGCCCTaGAGCCAATGGAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: GTHSGTRVRTQNGVVRNDHMDAP*SQWKTG
Trigger: TCCTGTTTTCCATTGGCTTCAGGGCGCATCCATGTG...GTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCACATGGATGCGCCCTaGAGCCAATGGAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASHMDAP*SQWKTG
Trigger: TCCTGTTTTCCATTGGCTTCAGGGCGCATCCATGTG...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGACGTGGCAGGTGAACTaGGCAATCGAATCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLTWQVN*AIESSL
Trigger: GAGGCTGGATTCGATTGCTCAGTTCACCTGCCACGT...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCAGTACTTCCACAGAGTaGGAAGGTGGCTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASSTSTE*EGGSQV
Trigger: GACTTGGGAGCCACCTTCTCACTCTGTGGAAGTACT...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp GGGACCCATTCAGGGACAAGAGTGAGGACACAGAACGGGGTGGTCAGAAATGACTCCGCCAGCTTCTTCTaGAGCTTGACATACTCCTGC +
Preference number: 4 (lower is better)
Translates to: GTHSGTRVRTQNGVVRNDSASFF*SLTYSC
Trigger: GCAGGAGTATGTCAAGCTGCAGAAGAAGCTGGCGGA...GTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGCTGCTCGTAGAGGTCTaGCACGATGGCCAGCAGACG +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMLLVEV*HDGQQT
Trigger: CGTCTGCTGGCCATCGTGGCAGACCTCTACGAGCAG...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGAAGGAGTCCTCCCCTTaGTGTCCTGCATGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLKESSP*CPACWG
Trigger: ACCCCAACATGCAGGACAGCAAGGGGAGGACTCCTT...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAATGGGCACCGTTGGTTaGCAGGAAAAGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASMGTVG*QEKSCC
Trigger: GCAGCAGCTCTTTTCCTGGCAACCAACGGTGCCCAT...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGTTTGGGTTGGCGCCTTaGTGCAGGAGCTCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMFGLAP*CRSSAV
Trigger: CACGGCAGAGCTCCTGCAGCAAGGCGCCAACCCAAA...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGGCGCTCTTGCTGTCCTaGCGCTGTATGGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMALLLS*RCMAMC
Trigger: GCACATGGCCATACAGCGGCAGGACAGCAAGAGCGC...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp ATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGATGGCGGCTCCAGAGTTTATATCTGCCTGGTaGTCCAGCAGGAAGAGTGCG +
Preference number: 4 (lower is better)
Translates to: MCSSVCPSDMVSLMAAPEFISAW*SSRKSA
Trigger: CGCACTCTTCCTGCTGGAGCACCAGGCAGATATAAA...CTCTGGAGCCGCCATCAATGACACCATGTCGGATGGGCAGACGCTACTGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp CACCACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTGGCGTCTGCAGATGTGTCAGCTCCTCGGGTaGATATGGCATCAACTACGA +
Preference number: 4 (lower is better)
Translates to: HHIRMVIGDRHVQWRLQMCQLLG*IWHQLR
Trigger: TCGTAGTTGATGCCATATGCACCCGAGGAGCTGACA...CATCTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCTGTCAGCTCCTCGGGTaGATATGGCATCAACTACGA +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVCQLLG*IWHQLR
Trigger: TCGTAGTTGATGCCATATGCACCCGAGGAGCTGACA...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCAGCAGCCCCGGACTCTCGTTTGAGAATGGCCTCGGCTGACTTGTTGTTCTTGCAAGAGGCTGCCAAATaGAAAGGGGTCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SAAPDSRLRMASADLLFLQEAAK*KGVCPS
Trigger: AGATGGGCAGACCCCTTTGCATTTGGCAGCCTCTTG...CAAGAACAACAAGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGGCTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCCCCAAGAGGCTaGCAAATGCAAAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRQPPRG*QMQRGL
Trigger: CAGACCCCTTTGCATTTGGCAGCCTCTTGGGGGCTG...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCTGGTGGCCCTTCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCATCAGAGTTCTGAACTaGCACATGAAGGAAATTCCG +
Preference number: 4 (lower is better)
Translates to: GWWPFMGQGKLHRTGTNSIRVLN*HMKEIP
Trigger: CGGAATTTCCTTCATGTGGCAGTTCAGAACTCTGAT...GCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGAAGGGCCACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCCAGGCCATGCCGACACGCTGTGTGCAACGGGGTTTCTCCCCACTTGTTTCTATCAAAGATGGCCGCTaGATTCTCCTTGCCATATTG +
Preference number: 4 (lower is better)
Translates to: GQAMPTRCVQRGFSPLVSIKDGR*ILLAIL
Trigger: CAATATGGCAAGGAGAATGCAGCGGCCATCTTTGAT...AGAAACAAGTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACAGAGGATACCCCGGCATaGATTCTAGGAAGAGATCAA +
Preference number: 4 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTEDTPA*ILGRDQ
Trigger: TTGATCTCTTCCTAGAATGCATGCCGGGGTATCCTC...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGGAGGATACCCCGGCATaGATTCTAGGAAGAGATCAA +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGEDTPA*ILGRDQ
Trigger: TTGATCTCTTCCTAGAATGCATGCCGGGGTATCCTC...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCTACCTAAGCCCTGCCTaGTTCCTTATGGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASYLSPA*FLMALS
Trigger: GGAAAGGGCCATAAGGAAGCAGGCAGGGCTTAGGTA...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAGTTCCCTCCACTCCGTaGCCGTGGAGAAGATTAGTG +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASVPSTP*PWRRLV
Trigger: CACTAATCTTCTCCACGGGCACGGAGTGGAGGGAAC...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCTGTGCCTGCAGTTTCTaGCCAGCTACTGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRCACSF*PATAPP
Trigger: AGGAGGGGCAGTAGCTGGGCAGAAACTGCAGGCACA...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR GCA 90 bp GTTCTCGGCAAAGCGGCCCATACTGAGGCACACCATGAGGGCAGTAGCTCATCTTCATCTCAGCTTTGGTaGAGGCAGGAAGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VLGKAAHTEAHHEGSSSSSSQLW*RQEVRK
Trigger: CTTCCTGACTTCCTGCCTGCACCAAAGCTGAGATGA...AGATGAGCTACTGCCCTCATGGTGTGCCTCAGTATGGGCCGCTTTGCCGAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR CCA 90 bp GGGACCCATTCAGGGACAAGAGTGAGGACACAGAACGGGGTGGTCAGAAATGACCCCCACTTGTTTCTGTaGTTGACATGGGCACCGTTG +
Preference number: 4 (lower is better)
Translates to: GTHSGTRVRTQNGVVRNDPHLFL*LTWAPL
Trigger: CAACGGTGCCCATGTCAACCACAGAAACAAGTGGGG...GTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR CCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGGGATGCGGCCTCCTTTaGCAGAGGCAGAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMGCGLL*QRQSFL
Trigger: GAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCC...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCGATCGCCATGTGCAGTaGCGTCTGCAGATGGACGCT +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRDRHVQ*RLQMDA
Trigger: AGCGTCCATCTGCAGACGCCACTGCACATGGCGATC...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAAGGCCCAGCACAGTCTaGTCTCGGGAATCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASRPSTV*SRESLR
Trigger: CCTCAAAGATTCCCGAGACCAGACTGTGCTGGGCCT...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGTGTCCTGCCGCTGTATaGCCATGTGCAGTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLCPAAV*PCAVAS
Trigger: AGACGCTACTGCACATGGCCATACAGCGGCAGGACA...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCACTACGAGTGGAAGCTaGTTTCTGATGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASTTSGS*FLMASW
Trigger: CCAGCTGGCCATCAGAAACCAGCTTCCACTCGTAGT...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCTCCTCGGGTGCATATaGCATCAACTACGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVLLGCI*HQLRVE
Trigger: TTCCACTCGTAGTTGATGCCATATGCACCCGAGGAG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TTGTTCTTGAAAGTCATGGCACAGGCAAACGGGGTCAGCCCTTGTCTGTCTCGTCCTCTCCTTCTCCATTaGCGCCTGGTTGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LFLKVMAQANGVSPCLSRPLLLH*RLVVWD
Trigger: GTCCCAGACAACCAGGCGCCAATGGAGAAGGAGAGG...ACGAGACAGACAAGGGCTGACCCCGTTTGCCTGTGCCATGACTTTCAAGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCCTGTGCGTTCACGTTaGCACCAAACTCCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASPVRSR*HQTPED
Trigger: GTCTTCTGGAGTTTGGTGCCAACGTGAACGCACAGG...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TCAGCAGCCCCGGACTCTCGTTTGAGAATGGCCTCGGCTGACTTGTTGTTCTTGCCTGTGCGTTCACGTTaGCACCAAACTCCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SAAPDSRLRMASADLLFLPVRSR*HQTPED
Trigger: GTCTTCTGGAGTTTGGTGCCAACGTGAACGCACAGG...CAAGAACAACAAGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGGCTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCAGATGGAGGGCAGTCTaGCGATGCTTGGTTAATTCG +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVRWRAV*RCLVNS
Trigger: CGAATTAACCAAGCATCGCCAGACTGCCCTCCATCT...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CAA 72 bp ATCTATCACACCATGGTCCTTAATCGTTCCAGTCTATaGCCGCAGGAAGACACCCGCCAGCTCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: IYHTMVLNRSSL*PQEDTRQLLLW
Trigger: CCAGAGCAGGAGCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CAA 72 bp CGCAGCATCACTAGGGAGGATTTCAGCAAGAAGCATTaGTGTCAAGGACATAGGACCTGCCGGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSITREDFSKKH*CQGHRTCRPEA
Trigger: AGCCTCAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCCTAGTGATGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
3UTR CAA 72 bp CCGGACTCTCGTTTGAGAATGGCCTCGGCTGACTTGTaGTTCTTGAAAGTCATGGCACAGGCAAACGGGGTC +
Preference number: 4 (lower is better)
Translates to: PDSRLRMASADL*FLKVMAQANGV
Trigger: GACCCCGTTTGCCTGTGCCATGACTTTCAAGAACAACAAGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAGCTTCTTCTGCAGCTTaGCATACTCCTGCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASASSAA*HTPAAE
Trigger: TTCTGCGGCAGGAGTATGTCAAGCTGCAGAAGAAGC...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp CTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGGTGGCCAGGACAAACTTGTaGGCACTGATGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LVPATVTWEVSVSLPFRVARTNL*ALMCLS
Trigger: GGACAGGCACATCAGTGCTCACAAGTTTGTCCTGGC...CACCCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR TCA 90 bp TGCCGCTGTATGGCCATGTGCAGTAGCGTCTGCCCATCCGACATGGTGTCATTGCTGAGGAGCTGTAGCTaGAACCGATTTGCTAGTTTC +
Preference number: 4 (lower is better)
Translates to: CRCMAMCSSVCPSDMVSLLRSCS*NRFASF
Trigger: GAAACTAGCAAATCGGTTTCAGCTACAGCTCCTCAG...CAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATACAGCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCGCCAGATCTCCGTTATaGTCCGCTTCATTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASARSPL*SASFSF
Trigger: GAAGCTGAATGAAGCGGATCATAACGGAGATCTGGC...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGTCCACATCAGCTTTGTaGCTAACCAGCGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLSTSAL*LTSVVA
Trigger: TGCCACCACGCTGGTTAGTCACAAAGCTGATGTGGA...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp CTGAGCGCTCATGCTGCTGAAATCCTCCTTCCTCAGGTCGTCCCAATGACTTGCACTGCAGCAGCTGACTaGACACATATTCATTCCCGG +
Preference number: 4 (lower is better)
Translates to: LSAHAAEILLPQVVPMTCTAAAD*THIHSR
Trigger: CCGGGAATGAATATGTGTTCAGTCAGCTGCTGCAGT...GCAAGTCATTGGGACGACCTGAGGAAGGAGGATTTCAGCAGCATGAGCGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp GGTGCGTCTGTGTGGCTGCCGCGCTGGATGAGTCTGGCTGCAAAGCTGTTCTCATGCCCTCGTGGTCTTTaGGTTCTAAATCTAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GASVWLPRWMSLAAKLFSCPRGL*VLNLVV
Trigger: AACAACTAGATTTAGAACTCAAAGACCACGAGGGCA...TGAGAACAGCTTTGCAGCCAGACTCATCCAGCGCGGCAGCCACACAGACGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCAGCTGTTCTCATCAAATaGAGTCCCATTTACCACGGG +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASAVLIK*SPIYHG
Trigger: CCCGTGGTAAATGGGACTTCATTTGATGAGAACAGC...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTACTTGTTTCTGTGGTTaGCATGGGCACCGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRTCFCG*HGHRWL
Trigger: CAACCAACGGTGCCCATGTCAACCACAGAAACAAGT...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGCTGTCTCCCCGTCCTaGGTCCTGACATTTATATCT +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRAVSPS*VLTFIS
Trigger: AGATATAAATGTCAGGACTCAGGACGGGGAGACAGC...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GAAGTCCGGAATGATCTGCAAGTTGTTGGTGGCATGAAGAGCATTGGCTTTCTGGTGGAAGCTGGTTTCTaGTGGCCAGCTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: EVRNDLQVVGGMKSIGFLVEAGF*WPAGGL
Trigger: CAGCCCTCCAGCTGGCCATCAGAAACCAGCTTCCAC...CAGAAAGCCAATGCTCTTCATGCCACCAACAACTTGCAGATCATTCCGGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp GTGTCCCTGTATGTTGCTAGCAGAATGGGGAGAGGTCTAATTCCTAATCACATTCTGTGCAGGAGCGTCTaGAGGCACCCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: VSLYVASRMGRGLIPNHILCRSV*RHPPGP
Trigger: GGGACCTGGTGGGTGCCTTCAGACGCTCCTGCACAG...AATGTGATTAGGAATTAGACCTCTCCCCATTCTGCTAGCAACATACAGGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGCTGACTTGTTGTTCTTaGAAGTCATGGCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGLTCCS*KSWHRQ
Trigger: TTGCCTGTGCCATGACTTTCAAGAACAACAAGTCAG...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GTGTCCCTGTATGTTGCTAGCAGAATGGGGAGAGGTCTAATTCCTAATCACATTCAGCTGCTGGGGAGGTaGCCAAGGACGTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VSLYVASRMGRGLIPNHIQLLGR*PRTWPG
Trigger: TCCAGGCCACGTCCTTGGTCACCTCCCCAGCAGCTG...AATGTGATTAGGAATTAGACCTCTCCCCATTCTGCTAGCAACATACAGGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGGCCCAGCTGCACTCCTaGCACCTCAGTAGCATGAAC +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMAQLHS*HLSSMN
Trigger: GTTCATGCTACTGAGGTGTCAGGAGTGCAGCTGGGC...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCAGCAAGACGAGAGAATaGGACGGCTGCTACGAGGTG +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRSKTRE*DGCYEV
Trigger: CACCTCGTAGCAGCCGTCTCATTCTCTCGTCTTGCT...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGTCTCCAACAGCAGAGTaGCTGAGGACTCCACAGACA +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLSPTAE*LRTPQT
Trigger: TGTCTGTGGAGTCCTCAGTCACTCTGCTGTTGGAGA...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AAAGTAAGGTGGCGCACACGTGGCCAGGGCCCTTGGCTGGTGGCCCTTCATGGGTTTAAACATTCTGTATaGAATATGTCAGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: KVRWRTRGQGPWLVALHGFKHSV*NMSDWG
Trigger: CCCCCAGTCTGACATATTTCATACAGAATGTTTAAA...CCCATGAAGGGCCACCAGCCAAGGGCCCTGGCCACGTGTGCGCCACCTTACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGCTCTCCTTGTTTGCCTaGGCAGCCAAGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMLSLFA*AAKRAQ
Trigger: CTGCGCTCTCTTGGCTGCGCAGGCAAACAAGGAGAG...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGGGCATTCAGCTCCTCTaGCGTCTGGTAGAAGCGAAT +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLGIQLL*RLVEAN
Trigger: ATTCGCTTCTACCAGACGGCAGAGGAGCTGAATGCC...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GTTTCTCCCCACTTGTTTCTGTGGTTGACATGGGCACCGTTGGTTGCCAGGAAATACAAGGCCACAAGGTaGAGTGGTGTCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VSPHLFLWLTWAPLVARKYKATR*SGVSWA
Trigger: TGCCCAGGAGACACCACTGCACCTTGTGGCCTTGTA...TTTCCTGGCAACCAACGGTGCCCATGTCAACCACAGAAACAAGTGGGGAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp ATGTTGGGGTTGGCACCAGCCTGCAGAAGGGCCTCTGCAATCTGCGCCATCTCACTGGATGAGTCTGGCTaGAAAGCTGTTCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: MLGLAPACRRASAICAISLDESG*KAVLIK
Trigger: TTTGATGAGAACAGCTTTGCAGCCAGACTCATCCAG...TGAGATGGCGCAGATTGCAGAGGCCCTTCTGCAGGCTGGTGCCAACCCCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GTGTCCCTGTATGTTGCTAGCAGAATGGGGAGAGGTCTAATTCCTAATCACATTTGTCGCCGTGTCAGGTaGGTCTGTGTGGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: VSLYVASRMGRGLIPNHICRRVR*VCVAAA
Trigger: CGCGGCAGCCACACAGACGCACCTGACACGGCGACA...AATGTGATTAGGAATTAGACCTCTCCCCATTCTGCTAGCAACATACAGGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCAGAGCATTGGCTTTCTaGTCCAGGATGACAGACACC +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASRALAF*SRMTDT
Trigger: GGTGTCTGTCATCCTGGAGCAGAAAGCCAATGCTCT...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CACCTCACGGTTAATATATGTACTAACAGCGATGAACGCCCAACAAGTTCTGGCGCCCAGCAGCTGGGCTaGGATCGTGTGCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: HLTVNICTNSDERPTSSGAQQLG*DRVHAS
Trigger: ACTGGCATGCACACGATCGCAGCCCAGCTGCTGGGC...GCCAGAACTTGTTGGGCGTTCATCGCTGTTAGTACATATATTAACCGTGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCTTTATATCTGCCTGGTaGTCCAGCAGGAAGAGTGCG +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASFISAW*SSRKSA
Trigger: CGCACTCTTCCTGCTGGAGCACCAGGCAGATATAAA...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACCTGACATTTATATCTaGCTGGTGCTCCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASPDIYI*LVLQQE
Trigger: TTCCTGCTGGAGCACCAGGCAGATATAAATGTCAGG...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCTGTCAGCTCCTCGGGTaGATATGGCATCAACTACGA +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASCQLLG*IWHQLR
Trigger: TCGTAGTTGATGCCATATGCACCCGAGGAGCTGACA...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCACAAGAGGCTGCCAAATaGAAAGGGGTCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASQEAAK*KGVCPS
Trigger: AGATGGGCAGACCCCTTTGCATTTGGCAGCCTCTTG...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGCCCTTGTTATCCACCTaGTCAGCAGCCCCGGACTCT +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMPLLST*SAAPDS
Trigger: AGAGTCCGGGGCTGCTGAGCAGGTGGATAACAAGGG...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GATGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAAGGAGCAGCACCGTGCTaGCGTCTGCATCCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: DAWLIRSLWLPQEANCGQGAAPC*RLHPAC
Trigger: ACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTCC...TTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCATCGTTCCAGTCTATTaGCGCAGGAAGACACCCGCC +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRIVPVY*RRKTPA
Trigger: GGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGAT...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TTCCTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGGTCAAGCGGCCCAGCTaGACTCCTGACACCTCAGTA +
Preference number: 4 (lower is better)
Translates to: FLVPATVTWEVSVSLPFRVKRPS*TPDTSV
Trigger: TACTGAGGTGTCAGGAGTGCAGCTGGGCCGCTTGAC...CCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGTGGAAACTGACCACATaGCTCACATGGCCAAATGTT +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGWKLTT*LTWPNV
Trigger: AACATTTGGCCATGTGAGGCATGTGGTCAGTTTCCA...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGGCTGGTCAGTACCATTaGTATCCCTGGACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLAGQYH*YPWTQA
Trigger: AGCCTGAGTCCAGGGATAGCAATGGTACTGACCAGC...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCTATATCCACATGGATaGGCCCTGAAGCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVLYPHG*ALKPME
Trigger: TTCCATTGGCTTCAGGGCGCATCCATGTGGATATAG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AAATTGGAATCACCGACAATGCAGCTCTATAAAAAGTGCAGCACAGTAAAAGTGAAGAGCCTCCCGTGCTaGCCTCGGGGCCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: KLESPTMQLYKKCSTVKVKSLPC*PRGPAA
Trigger: AGCCGCGGGGCCCCGAGGGCAGCACGGGAGGCTCTT...CACTTTTACTGTGCTGCACTTTTTATAGAGCTGCATTGTCGGTGATTCCAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570535.5
CDS-3UTR CCA 90 bp CACCTCACGGTTAATATATGTACTAACAGCGATGAACGCCCAACAAGTTCTGGCGGCCACAAGGTGCAGTaGTGTCTCCTGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: HLTVNICTNSDERPTSSGGHKVQ*CLLGTQ
Trigger: CTGGGTGCCCAGGAGACACCACTGCACCTTGTGGCC...GCCAGAACTTGTTGGGCGTTCATCGCTGTTAGTACATATATTAACCGTGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGTGCGTTCTCTGCAAGTTGTTGGTaGCATGAAGAGCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: WLLMATWMGVLPSASCAFSASCW*HEEHWL
Trigger: AAGCCAATGCTCTTCATGCCACCAACAACTTGCAGA...GAACGCACAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp ATGATCCGCTTCATTCAGCTTCCCAGGGAGCTGGGAATCCATTTCAATCAGATACCAGAGCCCAGCAGCTaGGCTGCGATCGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: MIRFIQLPRELGIHFNQIPEPSS*AAIVCM
Trigger: CATGCACACGATCGCAGCCCAGCTGCTGGGCTCTGG...TATCTGATTGAAATGGATTCCCAGCTCCCTGGGAAGCTGAATGAAGCGGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp TGGCTGCTGATGGCCACGTGGATGGGGGTTCTTCCTTCTGCATCCTGTGCGTTCACATTTATATCTGCCTaGTGCTCCAGCAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: WLLMATWMGVLPSASCAFTFISA*CSSRKS
Trigger: ACTCTTCCTGCTGGAGCACCAGGCAGATATAAATGT...GAACGCACAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAACTACGAGTGGAAGCTaGTTTCTGATGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASTTSGS*FLMASW
Trigger: CCAGCTGGCCATCAGAAACCAGCTTCCACTCGTAGT...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCTCCTCGGGTGCATATaGCATCAACTACGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASLLGCI*HQLRVE
Trigger: TTCCACTCGTAGTTGATGCCATATGCACCCGAGGAG...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CACCACATCCGGATGGTTATAGGCGATCGCCATGTGCAGTGGCGTCTGCAGATGCGTTGTTTTCATCAATaGCTCTGTGCAGGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: HHIRMVIGDRHVQWRLQMRCFHQ*LCAGAS
Trigger: AGACGCTCCTGCACAGAGCCATTGATGAAAACAACG...CATCTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCATGATGACACCGTGTTaGCTGCTGATGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRMMTPC*LLMATW
Trigger: CCACGTGGCCATCAGCAGCCAACACGGTGTCATCAT...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGGAATTCACATTAGCGTaGACACTGATCAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGEFTLA*TLIRNS
Trigger: GCTGTTCCTGATCAGTGTCCACGCTAATGTGAATTC...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCATTAATTCGTTCACTTTaGCTCCCGCAAGAAGCAAAT +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPALIRSL*LPQEAN
Trigger: ATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAA...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR CCA 90 bp GGGACCCATTCAGGGACAAGAGTGAGGACACAGAACGGGGTGGTCAGAAATGACAGATGGAGGGCAGTCTaGCGATGCTTGGTTAATTCG +
Preference number: 4 (lower is better)
Translates to: GTHSGTRVRTQNGVVRNDRWRAV*RCLVNS
Trigger: CGAATTAACCAAGCATCGCCAGACTGCCCTCCATCT...GTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR CCA 90 bp CTGCCTTCCCTACATCTCTGTTCCTCAGTAGGATCCTTGGGTGTGCTCATCTCAACCACGGAGGCTCCTTaGACAGCATATCCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: LPSLHLCSSVGSLGVLISTTEAP*TAYPAV
Trigger: GACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGT...TGAGATGAGCACACCCAAGGATCCTACTGAGGAACAGAGATGTAGGGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR CCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCATGAATGCTCTGGGATaGACACCAAGCTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVMNALG*TPSYWK
Trigger: CTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCAT...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATGGTATGGTAGGGCATaGGCAGAACAATCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASWYGRA*AEQSAS
Trigger: TGAGGCCGATTGTTCTGCCCATGCCCTACCATACCA...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR CCA 90 bp AAACCTAGATGGAGGTCAAGCTCTCCCCTTTCCCAAGACGTTCCCTCCACTCCGTCCACTCCGTGCCCGTaGAGAAGATTAGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: KPRWRSSSPLSQDVPSTPSTPCP*RRLVQK
Trigger: TTTCTGCACTAATCTTCTCCACGGGCACGGAGTGGA...CGGAGTGGAGGGAACGTCTTGGGAAAGGGGAGAGCTTGACCTCCATCTAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
3UTR CAA 72 bp AATGCCAGGCCCAGCACAGTCTGGTCTCGGGAATCTTaGAGGCTGAAGTCCGGAATGATCTGCAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: NARPSTVWSRES*RLKSGMICKLL
Trigger: CAACAACTTGCAGATCATTCCGGACTTCAGCCTCAAAGATTCCCGAGACCAGACTGTGCTGGGCCTGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
3UTR CAA 72 bp TCTCGTTTGAGAATGGCCTCGGCTGACTTGTTGTTCTaGAAAGTCATGGCACAGGCAAACGGGGTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SRLRMASADLLF*KVMAQANGVSP
Trigger: AGGGCTGACCCCGTTTGCCTGTGCCATGACTTTCAAGAACAACAAGTCAGCCGAGGCCATTCTCAAACGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTCAGGTCGTCCCAATaGCTTGCAATAATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASLRSSQ*LAIISA
Trigger: TGCAGAAATTATTGCAAGTCATTGGGACGACCTGAG...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGGAGCGCTCATGCTGCTaGAATCCTCCTTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMERSCC*NPPSSG
Trigger: ACCTGAGGAAGGAGGATTTCAGCAGCATGAGCGCTC...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGTGCCCTCGTGGTCTTTaGGTTCTAAATCTAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGCPRGL*VLNLVV
Trigger: AACAACTAGATTTAGAACTCAAAGACCACGAGGGCA...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCTTTCTGCTCCAGGATaGCAGACACCACATCCGGAT +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRLSAPG*QTPHPD
Trigger: ATCCGGATGTGGTGTCTGTCATCCTGGAGCAGAAAG...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCTGACTTGTTGTTCTTaGAAGTCATGGCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVLTCCS*KSWHRQ
Trigger: TTGCCTGTGCCATGACTTTCAAGAACAACAAGTCAG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp CTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGGTGGCGGACAATAATTTCTaGGCCTGCTTGGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: LVPATVTWEVSVSLPFRVADNNF*ACLDSE
Trigger: CTCGCTGTCCAAGCAGGCTCAGAAATTATTGTCCGC...CACCCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR TCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGAGGTCCAGTCAAAGCTaGTCATTAGAATCACTGATG +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGRSSQS*SLESLM
Trigger: CATCAGTGATTCTAATGATCAGCTTTGACTGGACCT...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TTGTTCTTGAAAGTCATGGCACAGGCAAACGGGGTCAGCCCTTGTCTGTCTCGTCGCAGAAGCATCAAGTaGTTCTCCAACTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: LFLKVMAQANGVSPCLSRRRSIK*FSNLAT
Trigger: GGTGGCCAAGTTGGAGAAGCACTTGATGCTTCTGCG...ACGAGACAGACAAGGGCTGACCCCGTTTGCCTGTGCCATGACTTTCAAGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGCTGCAGAAGGGCCTCTaGAATCTGCGCCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMLQKGL*NLRHLR
Trigger: TCTGAGATGGCGCAGATTGCAGAGGCCCTTCTGCAG...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TCAGCCCTTGTCTGTCTCGTACATTCAAATGGATATCGGGGTGAGAAACCAACAGGGTTGGCACCAGCCTaGAGAAGGGCCTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: SALVCLVHSNGYRGEKPTGLAPA*RRASAI
Trigger: GATTGCAGAGGCCCTTCTGCAGGCTGGTGCCAACCC...TGTTGGTTTCTCACCCCGATATCCATTTGAATGTACGAGACAGACAAGGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGAAGGAGTCCTCCCCTTaGTGTCCTGCATGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMKESSP*CPACWG
Trigger: ACCCCAACATGCAGGACAGCAAGGGGAGGACTCCTT...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGTGTGATATGCTGCACTaGCAGCCACAGAGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMCDMLH*QPQSRA
Trigger: AGCACGGCTCTGTGGCTGGCAGTGCAGCATATCACA...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGGAAGACACTGTGATATaGTGCACTGCCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLEDTVI*CTASHR
Trigger: TCTGTGGCTGGCAGTGCAGCATATCACAGTGTCTTC...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCCTGGATGAGTCTGGCTaGAAAGCTGTTCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVLDESG*KAVLIK
Trigger: TTTGATGAGAACAGCTTTGCAGCCAGACTCATCCAG...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp ATGATCCGCTTCATTCAGCTTCCCAGGGAGCTGGGAATCCATTTCAATCAGATATGCCGACACGCTGTGTaGAACGGGGTTTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: MIRFIQLPRELGIHFNQICRHAV*NGVSPH
Trigger: GTGGGGAGAAACCCCGTTGCACACAGCGTGTCGGCA...TATCTGATTGAAATGGATTCCCAGCTCCCTGGGAAGCTGAATGAAGCGGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp CACCTCACGGTTAATATATGTACTAACAGCGATGAACGCCCAACAAGTTCTGGCATGTGCAGTGGCGTCTaGAGATGGACGCTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: HLTVNICTNSDERPTSSGMCSGV*RWTLSA
Trigger: GGCGGACAGCGTCCATCTGCAGACGCCACTGCACAT...GCCAGAACTTGTTGGGCGTTCATCGCTGTTAGTACATATATTAACCGTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCACTAGGGATCAGAGTTCTGAACTaGCACATGAAGGAAATTCCG +
Preference number: 4 (lower is better)
Translates to: GRASYTELGPTALAASLGIRVLN*HMKEIP
Trigger: CGGAATTTCCTTCATGTGGCAGTTCAGAACTCTGAT...CCCTAGTGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AAACCTAGATGGAGGTCAAGCTCTCCCCTTTCCCAAGACGTTCCCTCCACTCCGAGGGCAGTCTGGCGATaGTTGGTTAATTCGTTCACT +
Preference number: 4 (lower is better)
Translates to: KPRWRSSSPLSQDVPSTPRAVWR*LVNSFT
Trigger: AGTGAACGAATTAACCAAGCATCGCCAGACTGCCCT...CGGAGTGGAGGGAACGTCTTGGGAAAGGGGAGAGCTTGACCTCCATCTAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp GAAGTCCGGAATGATCTGCAAGTTGTTGGTGGCATGAAGAGCATTGGCTTTCTGCTTCGGCGTCCACTGTaGACTCTGTCAGGAGAACCC +
Preference number: 4 (lower is better)
Translates to: EVRNDLQVVGGMKSIGFLLRRPL*TLSGEP
Trigger: GGGTTCTCCTGACAGAGTGCACAGTGGACGCCGAAG...CAGAAAGCCAATGCTCTTCATGCCACCAACAACTTGCAGATCATTCCGGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp TCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTGGCCAGGGCATCAAAACAAATGTTaGAAACCCGCACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SSTQARDFQSKVAHTWPGHQNKC*KPAQAC
Trigger: ACAAGCCTGTGCGGGTTTGCAACATTTGTTTTGATG...CCCTGGCCACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGGACCCATTCAGGGACAAGAGTGAGGACACAGAACGGGGTGGTCAGAAATGACCTATATCCACATGGATaGGCCCTGAAGCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: GTHSGTRVRTQNGVVRNDLYPHG*ALKPME
Trigger: TTCCATTGGCTTCAGGGCGCATCCATGTGGATATAG...GTCATTTCTGACCACCCCGTTCTGTGTCCTCACTCTTGTCCCTGAATGGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCTATATCCACATGGATaGGCCCTGAAGCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASLYPHG*ALKPME
Trigger: TTCCATTGGCTTCAGGGCGCATCCATGTGGATATAG...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AGTAAAGCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCAACCCTTCCTTGTTCCTaGTACTGTCACCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SKASSLSSQLPTLRGSASTLPCS*YCHLGS
Trigger: ACTTCCCAGGTGACAGTAGCAGGAACAAGGAAGGGT...TGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGCTTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR GCA 90 bp AACATTCTGTATGAAATATGTCAGACTGGGGGACGGGGGATCTCTTCTAATTCATGGCCCGGCACTGCCTaGAACCTCGCGAGAAGTGCG +
Preference number: 4 (lower is better)
Translates to: NILYEICQTGGRGISSNSWPGTA*NLARSA
Trigger: CGCACTTCTCGCGAGGTTGCAGGCAGTGCCGGGCCA...TGAATTAGAAGAGATCCCCCGTCCCCCAGTCTGACATATTTCATACAGAATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648043.1
CDS-3UTR CCA 90 bp TTCCTTGTTCCTGCTACTGTCACCTGGGAAGTTAGCGTTAGCTTGCCTTTCAGGAGTGCTTCTCCAACTTaGCCACCTCCTCTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: FLVPATVTWEVSVSLPFRSASPT*PPPLPP
Trigger: TGGCGGAAGAGGAGGTGGCCAAGTTGGAGAAGCACT...CCTGAAAGGCAAGCTAACGCTAACTTCCCAGGTGACAGTAGCAGGAACAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR CCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCAGCTTCCCAGGGAGCTaGGAATCCATTTCAATCAGA +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASSFPGS*ESISIR
Trigger: TCTGATTGAAATGGATTCCCAGCTCCCTGGGAAGCT...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCAAAGAGATCTCCTCTTTaGATTCCTTTGTGTAACAAG +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPAKRSPL*IPLCNK
Trigger: CTTGTTACACAAAGGAATCCAAAGAGGAGATCTCTT...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341657.9
ENST00000648043.1
CDS-3UTR CCA 90 bp GTCCACATCAGCTTTGTGACTAACCAGCGTGGTGGCAATACTCTCCAGTCGTCGGCCGTGCTGCCCTCGTaGTCTTTGAGTTCTAAATCT +
Preference number: 4 (lower is better)
Translates to: VHISFVTNQRGGNTLQSSAVLPS*SLSSKS
Trigger: AGATTTAGAACTCAAAGACCACGAGGGCAGCACGGC...CGACGACTGGAGAGTATTGCCACCACGCTGGTTAGTCACAAAGCTGATGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCCCCACTTGTTTCTGTaGTTGACATGGGCACCGTTG +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRPHLFL*LTWAPL
Trigger: CAACGGTGCCCATGTCAACCACAGAAACAAGTGGGG...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGAGGCCCAGCACAGTCTaGTCTCGGGAATCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMRPSTV*SRESLR
Trigger: CCTCAAAGATTCCCGAGACCAGACTGTGCTGGGCCT...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGTGTCCTGCCGCTGTATaGCCATGTGCAGTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMCPAAV*PCAVAS
Trigger: AGACGCTACTGCACATGGCCATACAGCGGCAGGACA...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TTGTTCTTGAAAGTCATGGCACAGGCAAACGGGGTCAGCCCTTGTCTGTCTCGTACTACGAGTGGAAGCTaGTTTCTGATGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LFLKVMAQANGVSPCLSRTTSGS*FLMASW
Trigger: CCAGCTGGCCATCAGAAACCAGCTTCCACTCGTAGT...ACGAGACAGACAAGGGCTGACCCCGTTTGCCTGTGCCATGACTTTCAAGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GGGAGGATTTCAGCAAGAAGCATTTGTGTCAAGGACATAGGACCTGCCGGCCTGCTCCTCGGGTGCATATaGCATCAACTACGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GRISARSICVKDIGPAGLLLGCI*HQLRVE
Trigger: TTCCACTCGTAGTTGATGCCATATGCACCCGAGGAG...CAGGCCGGCAGGTCCTATGTCCTTGACACAAATGCTTCTTGCTGAAATCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GTCCACATCAGCTTTGTGACTAACCAGCGTGGTGGCAATACTCTCCAGTCGTCGCTCCTCGGGTGCATATaGCATCAACTACGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: VHISFVTNQRGGNTLQSSLLGCI*HQLRVE
Trigger: TTCCACTCGTAGTTGATGCCATATGCACCCGAGGAG...CGACGACTGGAGAGTATTGCCACCACGCTGGTTAGTCACAAAGCTGATGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GAAGTCCGGAATGATCTGCAAGTTGTTGGTGGCATGAAGAGCATTGGCTTTCTGTGGCGCCTGGTTGTCTaGGACTGTTCACGTCACAGC +
Preference number: 4 (lower is better)
Translates to: EVRNDLQVVGGMKSIGFLWRLVV*DCSRHS
Trigger: GCTGTGACGTGAACAGTCCCAGACAACCAGGCGCCA...CAGAAAGCCAATGCTCTTCATGCCACCAACAACTTGCAGATCATTCCGGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGCTGCTGATGGCCACGTaGATGGGGGTTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMLLMAT*MGVLPS
Trigger: AGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAG...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp TGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAATAGTGGGCAGGTCCTGCTaGGCAGCAAGATGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: CLVNSFTLAPARSKLRTIVGRSC*AARWRA
Trigger: TGCCCTCCATCTTGCTGCCCAGCAGGACCTGCCCAC...TATTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR CCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCTGGCGCGGCACAAGTTaGCGTTCCCTTTCATGTATG +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRWRGTS*RSLSCM
Trigger: CATACATGAAAGGGAACGCCAACTTGTGCCGCGCCA...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTAAGATGTTGACTCCCTaGTTGTTATTCACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRKMLTP*LLFTPR
Trigger: CCTCGGGGTGAATAACAACCAGGGAGTCAACATCTT...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCTTGGTCGAGCATTTATaGCAAAGAAGACGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASLVEHL*QRRRPQ
Trigger: CTGCGGACGTCTTCTTTGCCATAAATGCTCGACCAA...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR CCA 90 bp GCACCACCCCGAAGGGGCTGGAAGCCAGGTGATCCACCCAAATGTGTGCCTGCAAGGCACTTAAGTTTATaGGAAATTTCGGTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: APPRRGWKPGDPPKCVPARHLSL*EISVLE
Trigger: CTCTAACACCGAAATTTCCCATAAACTTAAGTGCCT...TGCAGGCACACATTTGGGTGGATCACCTGGCTTCCAGCCCCTTCGGGGTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR CCA 90 bp AAACCTAGATGGAGGTCAAGCTCTCCCCTTTCCCAAGACGTTCCCTCCACTCCGAGAAACGGTTCAATATaGCAGGTGTGGGACATGAGC +
Preference number: 4 (lower is better)
Translates to: KPRWRSSSPLSQDVPSTPRNGSI*QVWDMS
Trigger: GCTCATGTCCCACACCTGCCATATTGAACCGTTTCT...CGGAGTGGAGGGAACGTCTTGGGAAAGGGGAGAGCTTGACCTCCATCTAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341657.9
CDS-3UTR CCA 90 bp CTGCCTTCCCTACATCTCTGTTCCTCAGTAGGATCCTTGGGTGTGCTCATCTCACTGGGGTCTTACCAGTaGTGTTTGCGAGTGGTGACT +
Preference number: 4 (lower is better)
Translates to: LPSLHLCSSVGSLGVLISLGSYQ*CLRVVT
Trigger: AGTCACCACTCGCAAACACCACTGGTAAGACCCCAG...TGAGATGAGCACACCCAAGGATCCTACTGAGGAACAGAGATGTAGGGAAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575298.1
CDS-3UTR TCA 90 bp CAGCCTCATCCAGCACACAAGCCAGAGACTTCCAAAGTAAGGTGGCGCACACGTACACATCATCCTCTCTaGACTCCAGCTCATCTGTAT +
Preference number: 4 (lower is better)
Translates to: QPHPAHKPETSKVRWRTRTHHPL*TPAHLY
Trigger: ATACAGATGAGCTGGAGTTCAGAGAGGATGATGTGT...ACGTGTGCGCCACCTTACTTTGGAAGTCTCTGGCTTGTGTGCTGGATGAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGGAGCCGTCACACCACGGAGGCTCCTTGGACAGCATATCCAGCAGTCGGAACAATTTTGTATAACAACTaGGCGCTCATGCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: RSRHTTEAPWTAYPAVGTILYNN*ALMLLK
Trigger: TTTCAGCAGCATGAGCGCTCAGTTGTTATACAAAAT...TGTTCCGACTGCTGGATATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCGCCAGATCTCCGTTATaGTCCGCTTCATTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRARSPL*SASFSF
Trigger: GAAGCTGAATGAAGCGGATCATAACGGAGATCTGGC...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp TCATGGGGCAGGGCAAGCTACACAGAACTGGGACCAACAGCACTCGCAGCATCATGCCCTCGTGGTCTTTaGGTTCTAAATCTAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SWGRASYTELGPTALAASCPRGL*VLNLVV
Trigger: AACAACTAGATTTAGAACTCAAAGACCACGAGGGCA...TGATGCTGCGAGTGCTGTTGGTCCCAGTTCTGTGTAGCTTGCCCTGCCCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp ACATCTAGTGAAATCGATCACAGTCTGACACACACACTGACAATCATATGGAATGCAGGAGCTCTGCCGTaGGGTTGGCCAGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: TSSEIDHSLTHTLTIIWNAGALP*GWPGHA
Trigger: GGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGC...ATTCCATATGATTGTCAGTGTGTGTGTCAGACTGTGATCGATTTCACTAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp AGTTCTGAACTGCCACATGAAGGAAATTCCGGCCCTTGTTATCCACCTGCTCAGCTTTCTGCTCCAGGATaGCAGACACCACATCCGGAT +
Preference number: 4 (lower is better)
Translates to: SSELPHEGNSGPCYPPAQLSAPG*QTPHPD
Trigger: ATCCGGATGTGGTGTCTGTCATCCTGGAGCAGAAAG...CTGAGCAGGTGGATAACAAGGGCCGGAATTTCCTTCATGTGGCAGTTCAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp GTTTCTCCCCACTTGTTTCTGTGGTTGACATGGGCACCGTTGGTTGCCAGGAAAGGCATCCTGGACTCTTaGATTCACATTAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: VSPHLFLWLTWAPLVARKGILDS*IHISVD
Trigger: GTCCACGCTAATGTGAATTCAAGAGTCCAGGATGCC...TTTCCTGGCAACCAACGGTGCCCATGTCAACCACAGAAACAAGTGGGGAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR TCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCGAGATTCGTGTGAGCTaGGGTCCAGTCAAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTREIRVS*GPVKAD
Trigger: ATCAGCTTTGACTGGACCTCAGCTCACACGAATCTC...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGCCTTGGAGATTCGTGTaGGCTGAGGTCCAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMPWRFV*AEVQSK
Trigger: CTTTGACTGGACCTCAGCTCACACGAATCTCCAAGG...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR TCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGGCTGTCTCCCCGTCCTaGGTCCTGCTGACATTTATA +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMAVSPS*VLLTFI
Trigger: TATAAATGTCAGCAGGACTCAGGACGGGGAGACAGC...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574367.5
CDS-3UTR GCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGTCCGCCAGCTTCTTCTaGAGCTTGACATACTCCTGC +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMSASFF*SLTYSC
Trigger: GCAGGAGTATGTCAAGCTGCAGAAGAAGCTGGCGGA...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CACCTCACGGTTAATATATGTACTAACAGCGATGAACGCCCAACAAGTTCTGGCGCTGTCACTGCGGGCTaGCAGGACAAACTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: HLTVNICTNSDERPTSSGAVTAG*QDKLVS
Trigger: GCTCACAAGTTTGTCCTGGCAGCCCGCAGTGACAGC...GCCAGAACTTGTTGGGCGTTCATCGCTGTTAGTACATATATTAACCGTGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GTGTCCCTGTATGTTGCTAGCAGAATGGGGAGAGGTCTAATTCCTAATCACATTAGGTTGGCCAGGCCATaGCGACACGCTGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: VSLYVASRMGRGLIPNHIRLARP*RHAVCN
Trigger: GTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCT...AATGTGATTAGGAATTAGACCTCTCCCCATTCTGCTAGCAACATACAGGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCAGAGCATTGGCTTTCTaGTCCAGGATGACAGACACC +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRRALAF*SRMTDT
Trigger: GGTGTCTGTCATCCTGGAGCAGAAAGCCAATGCTCT...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AACATTCTGTATGAAATATGTCAGACTGGGGGACGGGGGATCTCTTCTAATTCAGCCCAGCAGCTGGGCTaGGATCGTGTGCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: NILYEICQTGGRGISSNSAQQLG*DRVHAS
Trigger: ACTGGCATGCACACGATCGCAGCCCAGCTGCTGGGC...TGAATTAGAAGAGATCCCCCGTCCCCCAGTCTGACATATTTCATACAGAATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000648043.1
CDS-3UTR GCA 90 bp TATCACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCTGTCAGCTCCTCGGGTaGATATGGCATCAACTACGA +
Preference number: 4 (lower is better)
Translates to: YHTMVLNRSSLLPQEDTRCQLLG*IWHQLR
Trigger: TCGTAGTTGATGCCATATGCACCCGAGGAGCTGACA...GCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GATGCTTGGTTAATTCGTTCACTTTGGCTCCCGCAAGAAGCAAATTGCGGACAACAGCCCCCAAGAGGCTaGCAAATGCAAAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: DAWLIRSLWLPQEANCGQQPPRG*QMQRGL
Trigger: CAGACCCCTTTGCATTTGGCAGCCTCTTGGGGGCTG...TTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGAACGAATTAACCAAGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp GCCAGCTCATTAAGCAGCCAGCTTCCTACGCTGAGAGGCTCTGCCTCATCAGTCATCAGAGTTCTGAACTaGCACATGAAGGAAATTCCG +
Preference number: 4 (lower is better)
Translates to: ASSLSSQLPTLRGSASSVIRVLN*HMKEIP
Trigger: CGGAATTTCCTTCATGTGGCAGTTCAGAACTCTGAT...GACTGATGAGGCAGAGCCTCTCAGCGTAGGAAGCTGGCTGCTTAATGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CACCTCACGGTTAATATATGTACTAACAGCGATGAACGCCCAACAAGTTCTGGCCTTCGGCGTCCACTGTaGACTCTGTCAGGAGAACCC +
Preference number: 4 (lower is better)
Translates to: HLTVNICTNSDERPTSSGLRRPL*TLSGEP
Trigger: GGGTTCTCCTGACAGAGTGCACAGTGGACGCCGAAG...GCCAGAACTTGTTGGGCGTTCATCGCTGTTAGTACATATATTAACCGTGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CTGAGCGCTCATGCTGCTGAAATCCTCCTTCCTCAGGTCGTCCCAATGACTTGCCCGCTGCATTCTCCTTaGCATATTGTCCCAAAATGT +
Preference number: 4 (lower is better)
Translates to: LSAHAAEILLPQVVPMTCPLHSP*HIVPKC
Trigger: ACATTTTGGGACAATATGGCAAGGAGAATGCAGCGG...GCAAGTCATTGGGACGACCTGAGGAAGGAGGATTTCAGCAGCATGAGCGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572412.5
CDS-3UTR GCA 90 bp ACACCATGGTCCTTAATCGTTCCAGTCTATTGCCGCAGGAAGACACCCGCCAGCCCGCTGCATTCTCCTTaGCATATTGTCCCAAAATGT +
Preference number: 4 (lower is better)
Translates to: TPWSLIVPVYCRRKTPASPLHSP*HIVPKC
Trigger: ACATTTTGGGACAATATGGCAAGGAGAATGCAGCGG...GCTGGCGGGTGTCTTCCTGCGGCAATAGACTGGAACGATTAAGGACCATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp AAGGCCACGATTTTTCAGCTCTCATCTTTGAACCCTGTTAAGAAAGATTTCACCCCAGGAGCAGCACCGTaGTGCCGTCTGCATCCGGCT +
Preference number: 4 (lower is better)
Translates to: KATIFQLSSLNPVKKDFTPGAAP*CRLHPA
Trigger: AGCCGGATGCAGACGGCAGCACGGTGCTGCTCCTGG...GGTGAAATCTTTCTTAACAGGGTTCAAAGATGAGAGCTGAAAAATCGTGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp GGAAGACTTCATGAATGCTCTGGGATGGACACCAAGCTACTGGAAGGGGAAATGGTTCCCTTTCATGTATaGCAGGAGCAGCACCGTGCT +
Preference number: 4 (lower is better)
Translates to: GRLHECSGMDTKLLEGEMVPFHV*QEQHRA
Trigger: AGCACGGTGCTGCTCCTGGCATACATGAAAGGGAAC...CATTTCCCCTTCCAGTAGCTTGGTGTCCATCCCAGAGCATTCATGAAGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341657.9
ENST00000570535.5
ENST00000574367.5
ENST00000648043.1
CDS-3UTR GCA 90 bp CACCTCACGGTTAATATATGTACTAACAGCGATGAACGCCCAACAAGTTCTGGCTACGCTGAGAGGCTCTaGCTCATCAGTCAGCCCAGG +
Preference number: 4 (lower is better)<