RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKDD1A (Homo sapiens)

Ensembl gene IDs: ENSG00000166839

Ensembl transcript IDs: ENST00000319580.13, ENST00000395720.2, ENST00000395723.5, ENST00000483400.5, ENST00000491145.5, ENST00000496480.5, ENST00000496660.5, ENST00000513267.2, ENST00000611260.1, ENST00000620154.4

Found 501 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCTGGGTGAGGGCATTCACGGTGCTCCCAGCCCTGAGGAGGAGCTaGACACAGTCAGGGTGGGATCCTCCAGCAGCCGAATGCAGGGCA +
Preference number: 1 (lower is better)
Translates to: TWVRAFTVLPALRRS*TQSGWDPPAAECRA
Trigger: TGCCCTGCATTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCAGCTCCTCCTCAGGGCTGGGAGCACCGTGAATGCCCTCACCCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR GCA 90 bp AGAGCCCACGAGGAAGTCCAGAGCATCCAGCTGCCCGTGCTCAGCTaGCCTGTGAAACGCCGTCCTCCCCAGCTTGTCTACGTGGTCCAG +
Preference number: 1 (lower is better)
Translates to: RAHEEVQSIQLPVLS*PVKRRPPQLVYVVQ
Trigger: CTGGACCACGTAGACAAGCTGGGGAGGACGGCGTTTCACAGGGCAGCTGAGCACGGGCAGCTGGATGCTCTGGACTTCCTCGTGGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR CCA 90 bp CTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTATaGCTCAGCAGCCAAGAGCCGACCGCAGTCTTGGGAGGGCCTGGC +
Preference number: 1 (lower is better)
Translates to: LRVQESLWPLLPTWL*LSSQEPTAVLGGPG
Trigger: GCCAGGCCCTCCCAAGACTGCGGTCGGCTCTTGGCTGCTGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR CCA 90 bp TATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATaGCTATGGCTCAGCAGCCAAGAGCCGACCGCAGTCTTGGGAGGG +
Preference number: 1 (lower is better)
Translates to: YSLRVQESLWPLLPT*LWLSSQEPTAVLGG
Trigger: CCCTCCCAAGACTGCGGTCGGCTCTTGGCTGCTGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR CCA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTaGCCGTTACTGCCGACATGGCTATGGCTCAGCAGCCAAGAGCCG +
Preference number: 1 (lower is better)
Translates to: LLPRSLYSLRVQESL*PLLPTWLWLSSQEP
Trigger: CGGCTCTTGGCTGCTGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR GCA 90 bp GAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTaGCGACATGGCTATGGCTCAGCAGCCAAGAGCCGACCGCAGTCT +
Preference number: 1 (lower is better)
Translates to: EASIHSGFRNPCGRY*RHGYGSAAKSRPQS
Trigger: AGACTGCGGTCGGCTCTTGGCTGCTGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR GCA 90 bp CACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTCTGCTaGCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGC +
Preference number: 1 (lower is better)
Translates to: HRAQQWRSQDQNLVC*LEASIHSGFRNPCG
Trigger: GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
3UTR GCA 90 bp CAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACTaGCCTAACATCCCCTGCGCTCCACCTCCTCATCCCTCCCTTCCT +
Preference number: 1 (lower is better)
Translates to: QCHVPTITVSYRTFH*PNIPCAPPPHPSLP
Trigger: AGGAAGGGAGGGATGAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR TCA 90 bp GCTCACATTAGAGCAAACGCTTTGTGCTGTACATGCTATGGGTTTTaGCCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACA +
Preference number: 1 (lower is better)
Translates to: AHIRANALCCTCYGF*PMPNVMYPPSQCHT
Trigger: TGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAGCATGTACAGCACAAAGCGTTTGCTCTAATGTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR TCA 90 bp CATGAAAAAGATCAGTGTACAAACATTTGCCTCCTGGGCTCTGCATaGCTGTGCATTTCAGTAGAATCACCTGGAGGTCTGTTAACAGTG +
Preference number: 1 (lower is better)
Translates to: HEKDQCTNICLLGSA*LCISVESPGGLLTV
Trigger: CACTGTTAACAGACCTCCAGGTGATTCTACTGAAATGCACAGTCATGCAGAGCCCAGGAGGCAAATGTTTGTACACTGATCTTTTTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
3UTR GCA 90 bp TTAGAGCAAACGCTTTGTGCTGTACATGCTATGGGTTTTGACCAATaGCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTT +
Preference number: 1 (lower is better)
Translates to: LEQTLCAVHAMGFDQ*PMSCTHHHSVIQNL
Trigger: AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAGCATGTACAGCACAAAGCGTTTGCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR-3UTR GCA 90 bp CGACATGGCTATGGCTCAGCAGCCAAGAGCCGACCGCAGTCTTGGGAGGGCCTGCTGCCCGTGCTCAGCTaGCCTGTGAAACGCCGTCCT +
Preference number: 2 (lower is better)
Translates to: RHGYGSAAKSRPQSWEGLLPVLS*PVKRRP
Trigger: AGGACGGCGTTTCACAGGGCAGCTGAGCACGGGCAG...CAGGCCCTCCCAAGACTGCGGTCGGCTCTTGGCTGCTGAGCCATAGCCATGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CCA 90 bp TGCACACAGTCAGGGTGGGATCCTCCAGCAGCCGAATGCAGGGCAGTCAGACCTCCCAGCTTGTCTACGTaGTCCAGGGCCACATCCTCC +
Preference number: 2 (lower is better)
Translates to: CTQSGWDPPAAECRAVRPPSLST*SRATSS
Trigger: GGAGGATGTGGCCCTGGACCACGTAGACAAGCTGGG...AGGTCTGACTGCCCTGCATTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CCA 90 bp CTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCAGCCGACCGCAGTCTTaGGAGGGCCTGGCTACCTGG +
Preference number: 2 (lower is better)
Translates to: LVCCLEASIHSGFRNPCGSRPQS*EGLATW
Trigger: CCAGGTAGCCAGGCCCTCCCAAGACTGCGGTCGGCT...GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR TCA 90 bp CTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGACCAGCAGCCAGATaGAGGGCAGTGTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: LVCCLEASIHSGFRNPCGRPAAR*RAVFPS
Trigger: GGAGGGGAACACTGCCCTTCATCTGGCTGCTGGTCG...GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CCA 90 bp ACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTGAGGGCCTGGCTACCTaGGTGAGGGCATTCACGGTG +
Preference number: 2 (lower is better)
Translates to: TCSRSQGSAVEKPRSEPCEGLAT*VRAFTV
Trigger: CACCGTGAATGCCCTCACCCAGGTAGCCAGGCCCTC...ACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CCA 90 bp CTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCTGCCGACATGGCTATaGCTCAGCAGCCAAGAGCCG +
Preference number: 2 (lower is better)
Translates to: LVCCLEASIHSGFRNPCGLPTWL*LSSQEP
Trigger: CGGCTCTTGGCTGCTGAGCCATAGCCATGTCGGCAG...GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR GCA 90 bp AGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCCCTCCAGCAGCCGAATaGAGGGCAGTCAGACCTTCC +
Preference number: 2 (lower is better)
Translates to: SNLLQVTGLSSGEAKIRTPPAAE*RAVRPS
Trigger: GGAAGGTCTGACTGCCCTGCATTCGGCTGCTGGAGG...GGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR GCA 90 bp GGCTCAGAGAGGTTAAGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAACCCTGTGGCCGTTACTaGCGACATGGCTATGGCTCA +
Preference number: 2 (lower is better)
Translates to: GSERLSNLLQVTGLSSGEPCGRY*RHGYGS
Trigger: TGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGG...TTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CCA 90 bp CCCTCCTTGTCTTTGACATTGTGGTCACAGCCAGAGCCCACGAGGAAGTCCAGAGTTCAGGAATCCCTGTaGCCGTTACTGCCGACATGG +
Preference number: 2 (lower is better)
Translates to: PSLSLTLWSQPEPTRKSRVQESL*PLLPTW
Trigger: CCATGTCGGCAGTAACGGCCACAGGGATTCCTGAAC...TCTGGACTTCCTCGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR CAA 90 bp CTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTaGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATC +
Preference number: 2 (lower is better)
Translates to: LQVTGLSSGEAKIRT*SAASKPLFTQGSGI
Trigger: GATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
3UTR-3UTR CCA 90 bp ACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTATGGCTCAGTTGTCTTTGACATTGTaGTCACAGCCAGAGCCCACG +
Preference number: 2 (lower is better)
Translates to: TQGSGIPVAVTADMAMAQLSLTL*SQPEPT
Trigger: CGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAA...CTGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CCA 90 bp TCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTATTGCACACAGTCAGGGTaGGATCCTCCAGCAGCCGAA +
Preference number: 2 (lower is better)
Translates to: SIHSGFRNPCGRYCRHGYCTQSG*DPPAAE
Trigger: TTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA...ATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CCA 90 bp GGCTCAGAGAGGTTAAGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGTAGTCCCAGCCTCTTaGGAGGCTGAGTCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: GSERLSNLLQVTGLSSGEVVPAS*EAESGK
Trigger: TTTTCCTGACTCAGCCTCCCAAGAGGCTGGGACTAC...TTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
3UTR-3UTR TCA 90 bp CACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACAGGCACAAGAATCATTTaGACCCGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: HRELPRTLQHTQFPRLLTGTRII*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAATGATTCTTGTGCC...TGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620154.4
3UTR-3UTR GCA 90 bp ACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTTTGCCTCCTGGGCTCTaGATGACTGTGCATTTCAGT +
Preference number: 2 (lower is better)
Translates to: TCWTGLQALGPILMKKISLPPGL*MTVHFS
Trigger: ACTGAAATGCACAGTCATGCAGAGCCCAGGAGGCAA...ACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395720.2
3UTR-3UTR CCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACCATCTTCTGTTCAGGTaGCTCCACACGCTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYHLLFR*LHTLRS
Trigger: GGACCTCAGCGTGTGGAGCCACCTGAACAGAAGATG...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620154.4
3UTR-3UTR CCA 90 bp CCAGGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGTTCAGGAATCCCTGTaGCCGTTACTGCCGACATGG +
Preference number: 2 (lower is better)
Translates to: PGHRGEFLLAELMSTTGRVQESL*PLLPTW
Trigger: CCATGTCGGCAGTAACGGCCACAGGGATTCCTGAAC...TCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
3UTR-3UTR TCA 90 bp TGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAACTCCTGGGCTCTGCATaGCTGTGCATTTCAGTAGAA +
Preference number: 2 (lower is better)
Translates to: WTGLQALGPILMKKISVQLLGSA*LCISVE
Trigger: TTCTACTGAAATGCACAGTCATGCAGAGCCCAGGAG...TTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
3UTR-3UTR CCA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAACATTTGCCTCCTaGGCTCTGCATGACTGTGCA +
Preference number: 2 (lower is better)
Translates to: CWTGLQALGPILMKKISVQTFAS*ALHDCA
Trigger: TGCACAGTCATGCAGAGCCCAGGAGGCAAATGTTTG...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
3UTR-3UTR GCA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCCTCTCACTGCCCTTaGAGCTCCTGGAAATCACTG +
Preference number: 2 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLSSHCP*SSWKSL
Trigger: CAGTGATTTCCAGGAGCTGCAAGGGCAGTGAGAGGA...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR-3UTR TCA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTCTCCTGGGCTCTGCATaGCTGTGCATTTCAGTAGAA +
Preference number: 2 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLLLGSA*LCISVE
Trigger: TTCTACTGAAATGCACAGTCATGCAGAGCCCAGGAG...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620154.4
3UTR-3UTR GCA 90 bp AGAAAAATTGAGCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAATGGGTTTTGACCAATaGCCAATGTCATGTACCCAC +
Preference number: 2 (lower is better)
Translates to: RKIEQIAQRAPTYSSAHTMGFDQ*PMSCTH
Trigger: GTGGGTACATGACATTGGGCATTGGTCAAAACCCAT...TGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGCTCAATTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR-3UTR TCA 90 bp AGAAAAATTGAGCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGCTCCTGGAAATCACTaGTCTTTTTACTGTCTTTGT +
Preference number: 2 (lower is better)
Translates to: RKIEQIAQRAPTYSSAHTAPGNH*SFYCLC
Trigger: ACAAAGACAGTAAAAAGATCAGTGATTTCCAGGAGC...TGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGCTCAATTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR-3UTR TCA 90 bp CCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTGCTCCTGGAAATCACTaGTCTTTTTACTGTCTTTGT +
Preference number: 2 (lower is better)
Translates to: PRTLQHTQFPRLLTSGISAPGNH*SFYCLC
Trigger: ACAAAGACAGTAAAAAGATCAGTGATTTCCAGGAGC...ACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR CCA 72 bp AAGAGCCGACCGCAGTCTTGGGAGGGCCTGGCTACCTaGGTGAGGGCATTCACGGTGCTCCCAGCCCTGAGG +
Preference number: 3 (lower is better)
Translates to: KSRPQSWEGLAT*VRAFTVLPALR
Trigger: CCTCAGGGCTGGGAGCACCGTGAATGCCCTCACCCAGGTAGCCAGGCCCTCCCAAGACTGCGGTCGGCTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR TCA 72 bp TCCAGAGCATCCAGCTGCCCGTGCTCAGCTGCCCTGTaGAACGCCGTCCTCCCCAGCTTGTCTACGTGGTCC +
Preference number: 3 (lower is better)
Translates to: SRASSCPCSAAL*NAVLPSLSTWS
Trigger: GGACCACGTAGACAAGCTGGGGAGGACGGCGTTTCACAGGGCAGCTGAGCACGGGCAGCTGGATGCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CAA 90 bp CTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCGCCGTCCTCCCCAGCTaGTCTACGTGGTCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: LVCCLEASIHSGFRNPCGAVLPS*STWSRA
Trigger: GGCCCTGGACCACGTAGACAAGCTGGGGAGGACGGC...GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CAA 90 bp CTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCGAGCCGACCGCAGTCTaGGGAGGGCCTGGCTACCTG +
Preference number: 3 (lower is better)
Translates to: LVCCLEASIHSGFRNPCGEPTAV*GGPGYL
Trigger: CAGGTAGCCAGGCCCTCCCAAGACTGCGGTCGGCTC...GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR GCA 72 bp TGCACACAGTCAGGGTGGGATCCTCCAGCAGCCGAATaGAGGGCAGTCAGACCTTCCGCATTCTGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: CTQSGWDPPAAE*RAVRPSAFCSS
Trigger: GGAGGAGCAGAATGCGGAAGGTCTGACTGCCCTGCATTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR CCA 72 bp CAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTATaGCTCAGCAGCCAAGAGCCGACCGCAGTCTTGGGA +
Preference number: 3 (lower is better)
Translates to: QESLWPLLPTWL*LSSQEPTAVLG
Trigger: TCCCAAGACTGCGGTCGGCTCTTGGCTGCTGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR CCA 72 bp AGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATaGCTATGGCTCAGCAGCCAAGAGCCGACCGCAGTC +
Preference number: 3 (lower is better)
Translates to: RVQESLWPLLPT*LWLSSQEPTAV
Trigger: GACTGCGGTCGGCTCTTGGCTGCTGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CAA 90 bp TGCACACAGTCAGGGTGGGATCCTCCAGCAGCCGAATGCAGGGCAGTCAGACCTTCCTTGTCTTTGACATaGTGGTCACAGCCAGAGCCC +
Preference number: 3 (lower is better)
Translates to: CTQSGWDPPAAECRAVRPSLSLT*WSQPEP
Trigger: GGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGA...AGGTCTGACTGCCCTGCATTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CAA 90 bp GGCTCAGAGAGGTTAAGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCGCACCATaGCACTTCAGCCTGGGCGAC +
Preference number: 3 (lower is better)
Translates to: GSERLSNLLQVTGLSSGEAKIAP*HFSLGD
Trigger: GTCGCCCAGGCTGAAGTGCAATGGTGCGATCTTGGC...TTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
3UTR TCA 72 bp TGCAGCACAGCCATATGGCCCCGACCAGCAGCCAGATaGAGGGCAGTGTTCCCCTCCTTGTCTTTGACATTG +
Preference number: 3 (lower is better)
Translates to: CSTAIWPRPAAR*RAVFPSLSLTL
Trigger: CAATGTCAAAGACAAGGAGGGGAACACTGCCCTTCATCTGGCTGCTGGTCGGGGCCATATGGCTGTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR GCA 72 bp ATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTaGCGACATGGCTATGGCTCAGCAGCCAAGAGCCGA +
Preference number: 3 (lower is better)
Translates to: IHSGFRNPCGRY*RHGYGSAAKSR
Trigger: TCGGCTCTTGGCTGCTGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR CCA 72 bp CGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTaGCCGTTACTGCCGACATGGCTATGGCTCAGCAGC +
Preference number: 3 (lower is better)
Translates to: RSLYSLRVQESL*PLLPTWLWLSS
Trigger: GCTGCTGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR TCA 72 bp CAAGAATCATTTGAACCCGGGAGGCGGAGGTTGCCGTaGGCTGAGATCTCGCCATTGTACTCCAGCCTGTTG +
Preference number: 3 (lower is better)
Translates to: QESFEPGRRRLP*AEISPLYSSLL
Trigger: CAACAGGCTGGAGTACAATGGCGAGATCTCAGCTCACGGCAACCTCCGCCTCCCGGGTTCAAATGATTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620154.4
3UTR GCA 72 bp GTACCCACCATCACAGTGTCATACAGAACCTTTCACTaGCCTAACATCCCCTGCGCTCCACCTCCTCATCCC +
Preference number: 3 (lower is better)
Translates to: VPTITVSYRTFH*PNIPCAPPPHP
Trigger: GGGATGAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGATGGTGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR-3UTR CAA 90 bp GAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGAGAGGTTAAGTAACTaGCTCCAGGTCACAGGGCTC +
Preference number: 3 (lower is better)
Translates to: EASIHSGFRNPCGRYCRHERLSN*LQVTGL
Trigger: GAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTC...ATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
3UTR-3UTR CAA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTATTCCCCTCCTTGTCTTaGACATTGTGGTCACAGCCA +
Preference number: 3 (lower is better)
Translates to: LLPRSLYSLRVQESLWPLFPSLS*TLWSQP
Trigger: TGGCTGTGACCACAATGTCAAAGACAAGGAGGGGAA...TAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR-3UTR CAA 90 bp CAAGATCAGAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGGAGAGGTTAAGTAACTaGCTCCAGGTCACAGGGCTC +
Preference number: 3 (lower is better)
Translates to: QDQNLVCCLEASIHSGFRERLSN*LQVTGL
Trigger: GAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTC...CCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
3UTR-3UTR CAA 90 bp GGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGAGGCCAAGATCGCACCATaGCACTTCAGCCTGGGCGAC +
Preference number: 3 (lower is better)
Translates to: GHRGEFLLAELMSTTGREAKIAP*HFSLGD
Trigger: GTCGCCCAGGCTGAAGTGCAATGGTGCGATCTTGGC...CTCTCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
3UTR-3UTR CAA 90 bp TCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTATGCAGTGTTCCCCTCCTaGTCTTTGACATTGTGGTCA +
Preference number: 3 (lower is better)
Translates to: SIHSGFRNPCGRYCRHGYAVFPS*SLTLWS
Trigger: TGACCACAATGTCAAAGACAAGGAGGGGAACACTGC...ATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
3UTR GCA 72 bp CAGCAGTGGAGAAGCCAAGATCAGAACCTTGTCTGCTaGCTCGAAGCCTCTATTCACTCAGGGTTCAGGAAT +
Preference number: 3 (lower is better)
Translates to: QQWRSQDQNLVC*LEASIHSGFRN
Trigger: ATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTGGCTTCTCCACTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
3UTR CCA 72 bp AAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTaGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGT +
Preference number: 3 (lower is better)
Translates to: KKPLNDGHLLFR*LHTLRSHVPEG
Trigger: ACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
3UTR-3UTR CAA 90 bp ACTGAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTAACTGTCTTTGTAGTTTaGCCTGTTCCAGCATGTCAT +
Preference number: 3 (lower is better)
Translates to: TENSFSHPVPAPLFPIILTVFVV*PVPACH
Trigger: ATGACATGCTGGAACAGGCAAAACTACAAAGACAGT...TAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR-3UTR CAA 90 bp ACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACAGGCACAAGAATCATTaGAACCCGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: TNAQCHVPTITVSYRTFHRHKNH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAATGATTCTTGTGCCT...GTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620154.4
3UTR-3UTR CAA 90 bp CCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTTTCCTCTCACTGCCCTaGCAGCTCCTGGAAATCACT +
Preference number: 3 (lower is better)
Translates to: PRTLQHTQFPRLLTSGISFLSLP*QLLEIT
Trigger: AGTGATTTCCAGGAGCTGCAAGGGCAGTGAGAGGAA...ACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR TCA 72 bp CTTCCTCTCACTGCCCTTGCAGCTCCTGGAAATCACTaGTCTTTTTACTGTCTTTGTAGTTTTGCCTGTTCC +
Preference number: 3 (lower is better)
Translates to: LPLTALAAPGNH*SFYCLCSFACS
Trigger: GGAACAGGCAAAACTACAAAGACAGTAAAAAGATCAGTGATTTCCAGGAGCTGCAAGGGCAGTGAGAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR GCA 72 bp ACGCTTTGTGCTGTACATGCTATGGGTTTTGACCAATaGCCAATGTCATGTACCCACCATCACAGTGTCATA +
Preference number: 3 (lower is better)
Translates to: TLCAVHAMGFDQ*PMSCTHHHSVI
Trigger: TATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAGCATGTACAGCACAAAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR-3UTR CAA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTACTGTCTTTGTAGTTTaGCCTGTTCCAGCATGTCAT +
Preference number: 3 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLTVFVV*PVPACH
Trigger: ATGACATGCTGGAACAGGCAAAACTACAAAGACAGT...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR CCA 72 bp TCTTCAGCACACACAGTTTCCCCGATTATTAACATCTaGCATCAGTGTGGTACATTTGATACAACTGATGAA +
Preference number: 3 (lower is better)
Translates to: SSAHTVSPIINI*HQCGTFDTTDE
Trigger: TTCATCAGTTGTATCAAATGTACCACACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp GGCCTGGCTACCTGGGTGAGGGCATTCACGGTGCTCCCAGCCCTGAGGAGGAGCCGACCAGCAGCCAGATaGAGGGCAGTGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GLATWVRAFTVLPALRRSRPAAR*RAVFPS
Trigger: GGAGGGGAACACTGCCCTTCATCTGGCTGCTGGTCG...GCTCCTCCTCAGGGCTGGGAGCACCGTGAATGCCCTCACCCAGGTAGCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CCA 90 bp CACGGTGCTCCCAGCCCTGAGGAGGAGCTGCACACAGTCAGGGTGGGATCCTCCCTGCCGACATTGTTCTaGCGGGCGGCCTCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: HGAPSPEEELHTVRVGSSLPTLF*RAASWS
Trigger: GCTCCACGAGGCCGCCCGCCAGAACAATGTCGGCAG...GGAGGATCCCACCCTGACTGTGTGCAGCTCCTCCTCAGGGCTGGGAGCACCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGGCCCCTCCGGTTACATaGCTGTGCACCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPAPPVT*LCTSWG
Trigger: CCCCCAGGAGGTGCACAGCCATGTAACCGGAGGGGC...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGGTTGGCGCAGCCTCCTaGGTGGATGAGGACCCGAGA +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPVGAAS*VDEDPR
Trigger: TCTCGGGTCCTCATCCACGCAGGAGGCTGCGCCAAC...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR TCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGCGCCATGCAGCCAAATaGGCAGCATTCGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPRHAAK*AAFGGR
Trigger: ACGGCCACCGAATGCTGCTCATTTGGCTGCATGGCG...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGAGACCTTCCGCATTCTaGTCCTCCAGGTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPRPSAF*SSRSSP
Trigger: CGGGCTGGACCTGGAGGAGCAGAATGCGGAAGGTCT...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp CTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCTGCCAGGCGTGCTCTaGAGCCAGGTGAAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: LLFRWLHTLRSHVPEGLALPGVL*SQVKGR
Trigger: ACGCCCCTTCACCTGGCTGCAGAGCACGCCTGGCAG...GGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGGGTTCTCACCAGCCGTaGCCACGCCATGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPGSHQP*PRHAAK
Trigger: TTTGGCTGCATGGCGTGGCCACGGCTGGTGAGAACC...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGCGAACAGCGCTTTGCTaGGGTTCTCACCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPRTALC*GSHQPW
Trigger: CCACGGCTGGTGAGAACCCCAGCAAAGCGCTGTTCG...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp CTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCGCGCAGCCTCCTGCGTaGATGAGGACCCGAGACACA +
Preference number: 4 (lower is better)
Translates to: LLFRWLHTLRSHVPEGLAAQPPA*MRTRDT
Trigger: TGTGTCTCGGGTCCTCATCCACGCAGGAGGCTGCGC...GGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGTCCACTGTTGCTCGATaGCGTCGACATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPSTVAR*RRHVPP
Trigger: CGGAGGCACATGTCGACGCCATCGAGCAACAGTGGA...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp CTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCGGTCCCTCCTGCCAATaGCCACGAGGCCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: LLFRWLHTLRSHVPEGLAGPSCQ*PRGPRT
Trigger: TGTTCGAGGGCCTCGTGGCCATTGGCAGGAGGGACC...GGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp GGCCTGGCTACCTGGGTGAGGGCATTCACGGTGCTCCCAGCCCTGAGGAGGAGCGCCAGCACAGGCACATaGCCTTTTTGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GLATWVRAFTVLPALRRSASTGT*PFWACS
Trigger: AGAGCAAGCCCAAAAAGGCCATGTGCCTGTGCTGGC...GCTCCTCCTCAGGGCTGGGAGCACCGTGAATGCCCTCACCCAGGTAGCCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR GCA 90 bp TGCACACAGTCAGGGTGGGATCCTCCAGCAGCCGAATGCAGGGCAGTCAGACCTCTGCCCGTGCTCAGCTaGCCTGTGAAACGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: CTQSGWDPPAAECRAVRPLPVLS*PVKRRP
Trigger: AGGACGGCGTTTCACAGGGCAGCTGAGCACGGGCAG...AGGTCTGACTGCCCTGCATTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR GCA 90 bp GGTCATCTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTGCTGCGGACGGCCACTaGCAGGGCGGTTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: GHLLFRWLHTLRSHVPEGAADGH*QGGFSL
Trigger: CAGGGAAAAACCGCCCTGGCAGTGGCCGTCCGCAGC...ACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAGATGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGGTGCCTGTCCACTGTTaGTCGATGGCGTCGACATGT +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPVPVHC*SMASTC
Trigger: ACATGTCGACGCCATCGAGCAACAGTGGACAGGCAC...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp CTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCTCCACCAGGCTGACATaGTTGCTGCGGACGGCCACT +
Preference number: 4 (lower is better)
Translates to: LLFRWLHTLRSHVPEGLASTRLT*LLRTAT
Trigger: AGTGGCCGTCCGCAGCAACCATGTCAGCCTGGTGGA...GGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR TCA 90 bp CAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCGAGGTCCCACGTGCCTaGAGGTCTGGCCCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: QCHTEPFTALTSPALHLLEVPRA*RSGPSG
Trigger: ACCGGAGGGGCCAGACCTTCAGGCACGTGGGACCTC...GAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR TCA 90 bp CACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTATGGCTCAGCCTGGCTACCTGGGTaGGGGCATTCACGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HSGFRNPCGRYCRHGYGSAWLPG*GHSRCS
Trigger: GGAGCACCGTGAATGCCCTCACCCAGGTAGCCAGGC...TGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR GCA 90 bp CAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTCTGCTGCCGCGGCCTCGTGGAGCTaGCTCTCCAGAGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QVTGLSSGEAKIRTLSAAAASWS*LSRGSR
Trigger: CCTGCTTCCTCTGGAGAGGCAGCTCCACGAGGCCGC...GGCAGCAGACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR GCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGAGGTCAGGCCATCCTTaGTCTCACAGTGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPRSGHP*SHSGSW
Trigger: CCAAGATCCACTGTGAGAGCAAGGATGGCCTGACCT...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp CCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTTGGCGGGCGGCCTCGTaGAGCTGCCTCTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PLFTQGSGIPVAVTADMAWRAAS*SCLSRG
Trigger: TCCTCTGGAGAGGCAGCTCCACGAGGCCGCCCGCCA...AGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CCA 90 bp CCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCCTGGCTGTGCACCTCCTaGGGGCACTCGGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: PRAQKDHTCWTGLQALGPWLCTS*GHSGLR
Trigger: ACGCAGCCCCGAGTGCCCCCAGGAGGTGCACAGCCA...GGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR GCA 90 bp CTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCAGTGCAGGGCCACCCTaGCCACGTGGTTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LVCCLEASIHSGFRNPCGSAGPP*PRGFWP
Trigger: GGGCCAGAAACCACGTGGGCAGGGTGGCCCTGCACT...GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000513267.2
CDS-3UTR GCA 90 bp CTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCAGCACAGAACGGAGCTaGTGTGTTTCCTGCCGATGG +
Preference number: 4 (lower is better)
Translates to: LLFRWLHTLRSHVPEGLASTERS*CVSCRW
Trigger: CCATCGGCAGGAAACACAGCAGCTCCGTTCTGTGCT...GGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp CAGCAGCCGAATGCAGGGCAGTCAGACCTTCCGCATTCTGCTCCTCCAGGTCCATGCACACAGTCAGGGTaGGATCCTCCAGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: QQPNAGQSDLPHSAPPGPCTQSG*DPPAAE
Trigger: TTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA...TGGACCTGGAGGAGCAGAATGCGGAAGGTCTGACTGCCCTGCATTCGGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGCAGCTTAGGTTTTTCTaGGTGAGGGCATTCACGGTG +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPQLRFF*VRAFTV
Trigger: CACCGTGAATGCCCTCACCCAGAAAAACCTAAGCTG...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp GAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACTAGGGGCTGCAGATACCTaGAGGCCAGCCGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ENSFSHPVPAPLFPIILLGAADT*RPAATA
Trigger: TGCTGTGGCGGCTGGCCTCCAGGTATCTGCAGCCCC...TAGTAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp CCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCCGGGGCTGCAGATACCTaGAGGCCAGCCGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PRAQKDHTCWTGLQALGPGAADT*RPAATA
Trigger: TGCTGTGGCGGCTGGCCTCCAGGTATCTGCAGCCCC...GGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp CTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCGCTCCTGATAGCTCCTaGTGCCTGTCCACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LLFRWLHTLRSHVPEGLAAPDSS*CLSTVA
Trigger: AGCAACAGTGGACAGGCACCAGGAGCTATCAGGAGC...GGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp TCACAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCTGGCTGTGCACCTCCTaGGGGCACTCGGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: SQCHTEPFTALTSPALHLWLCTS*GHSGLR
Trigger: ACGCAGCCCCGAGTGCCCCCAGGAGGTGCACAGCCA...GAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR CCA 90 bp ACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTATGGCTCAGGAGGGCCTGGCTACCTaGGTGAGGGCATTCACGGTG +
Preference number: 4 (lower is better)
Translates to: TQGSGIPVAVTADMAMAQEGLAT*VRAFTV
Trigger: CACCGTGAATGCCCTCACCCAGGTAGCCAGGCCCTC...CTGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CCA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTAAGCCGACCGCAGTCTTaGGAGGGCCTGGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: LLPRSLYSLRVQESLWPLSRPQS*EGLATW
Trigger: CCAGGTAGCCAGGCCCTCCCAAGACTGCGGTCGGCT...TAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR TCA 90 bp AGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCGCCTGGCTACCTGGGTaGGGGCATTCACGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SNLLQVTGLSSGEAKIRTAWLPG*GHSRCS
Trigger: GGAGCACCGTGAATGCCCTCACCCAGGTAGCCAGGC...GGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp TCACAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCGCGGCCTCGTGGAGCTaGCTCTCCAGAGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SQCHTEPFTALTSPALHLAASWS*LSRGSR
Trigger: CCTGCTTCCTCTGGAGAGGCAGCTCCACGAGGCCGC...GAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR GCA 90 bp CCCTCCTTGTCTTTGACATTGTGGTCACAGCCAGAGCCCACGAGGAAGTCCAGAAGCAGACGCACAGCCTaGTCGTGCCCTGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: PSLSLTLWSQPEPTRKSRSRRTA*SCPAPA
Trigger: TGCAGGTGCAGGGCACGAGCAGGCTGTGCGTCTGCT...TCTGGACTTCCTCGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR GCA 90 bp CTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCAGGTCAGGCCATCCTTaGTCTCACAGTGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: LLFRWLHTLRSHVPEGLARSGHP*SHSGSW
Trigger: CCAAGATCCACTGTGAGAGCAAGGATGGCCTGACCT...GGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp GAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACTACTGCCCGTGCTCAGCTaGCCTGTGAAACGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: ENSFSHPVPAPLFPIILLLPVLS*PVKRRP
Trigger: AGGACGGCGTTTCACAGGGCAGCTGAGCACGGGCAG...TAGTAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp AGGGTGGGATCCTCCAGCAGCCGAATGCAGGGCAGTCAGACCTTCCGCATTCTGATGTCCACAAGTCGCTaGAGCACAGCCATATGGCCC +
Preference number: 4 (lower is better)
Translates to: RVGSSSSRMQGSQTFRILMSTSR*STAIWP
Trigger: GGGCCATATGGCTGTGCTGCAGCGACTTGTGGACAT...CAGAATGCGGAAGGTCTGACTGCCCTGCATTCGGCTGCTGGAGGATCCCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR GCA 90 bp CAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTCTGCTGCCCCTCCAGCAGCCGAATaGAGGGCAGTCAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: QVTGLSSGEAKIRTLSAAPPAAE*RAVRPS
Trigger: GGAAGGTCTGACTGCCCTGCATTCGGCTGCTGGAGG...GGCAGCAGACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp GCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCGTTGGCGCAGCCTCCTaGGTGGATGAGGACCCGAGA +
Preference number: 4 (lower is better)
Translates to: AKSSKGPYLLDGITGPWTVGAAS*VDEDPR
Trigger: TCTCGGGTCCTCATCCACGCAGGAGGCTGCGCCAAC...GGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR GCA 90 bp GCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATGCTGCGGACGGCCACTaGCAGGGCGGTTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ADSTESSHVLFSTHSFPDAADGH*QGGFSL
Trigger: CAGGGAAAAACCGCCCTGGCAGTGGCCGTCCGCAGC...ATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TGTGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGGCTGCGGACGGCCACTaGCAGGGCGGTTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CAKSSKGPYLLDGITGPWAADGH*QGGFSL
Trigger: CAGGGAAAAACCGCCCTGGCAGTGGCCGTCCGCAGC...CCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR GCA 90 bp GCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATCAGCCAGGTCCCTCCTaGCAATGGCCACGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: ADSTESSHVLFSTHSFPDQPGPS*QWPRGP
Trigger: AGGGCCTCGTGGCCATTGGCAGGAGGGACCTGGCTG...ATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCAGCCAGGTCCCTCCTaGCAATGGCCACGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CQELKRTIPVGRDYRPLDQPGPS*QWPRGP
Trigger: AGGGCCTCGTGGCCATTGGCAGGAGGGACCTGGCTG...GTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp CACGGTGCTCCCAGCCCTGAGGAGGAGCTGCACACAGTCAGGGTGGGATCCTCCGAGTTTACCAAGATCTaGAGGATTCGTAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: HGAPSPEEELHTVRVGSSEFTKI*RIRKWP
Trigger: CGGCCACTTACGAATCCTCCAGATCTTGGTAAACTC...GGAGGATCCCACCCTGACTGTGTGCAGCTCCTCCTCAGGGCTGGGAGCACCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CCA 90 bp ACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTATGGCTCAGCCCAGCTTGTCTACGTaGTCCAGGGCCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: TQGSGIPVAVTADMAMAQPSLST*SRATSS
Trigger: GGAGGATGTGGCCCTGGACCACGTAGACAAGCTGGG...CTGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGGGGATTACAGGCCCTTaGACCCATCCTCATGAAAAA +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPGITGP*THPHEK
Trigger: TTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCC...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp GAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATAGCCGACCGCAGTCTTaGGAGGGCCTGGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: EASIHSGFRNPCGRYCRHSRPQS*EGLATW
Trigger: CCAGGTAGCCAGGCCCTCCCAAGACTGCGGTCGGCT...ATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR TCA 90 bp TGCACACAGTCAGGGTGGGATCCTCCAGCAGCCGAATGCAGGGCAGTCAGACCTTCCCCTCCTTGTCTTTaGCATTGTGGTCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: CTQSGWDPPAAECRAVRPSPPCL*HCGHSQ
Trigger: CTGGCTGTGACCACAATGTCAAAGACAAGGAGGGGA...AGGTCTGACTGCCCTGCATTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR TCA 90 bp TGTGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGCGACCAGCAGCCAGATaGAGGGCAGTGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: CAKSSKGPYLLDGITGPWRPAAR*RAVFPS
Trigger: GGAGGGGAACACTGCCCTTCATCTGGCTGCTGGTCG...CCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR TCA 90 bp GAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGCGACCAGCAGCCAGATaGAGGGCAGTGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: EPCLLPRSLYSLRVQESLRPAAR*RAVFPS
Trigger: GGAGGGGAACACTGCCCTTCATCTGGCTGCTGGTCG...CAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR TCA 90 bp GCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATCGACCAGCAGCCAGATaGAGGGCAGTGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ADSTESSHVLFSTHSFPDRPAAR*RAVFPS
Trigger: GGAGGGGAACACTGCCCTTCATCTGGCTGCTGGTCG...ATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp GAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACTACATCCTCCGAGCCACTaGGGGCTGCATAGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: ENSFSHPVPAPLFPIILLHPPSH*GLHSEG
Trigger: GCCTTCACTATGCAGCCCTCAGTGGCTCGGAGGATG...TAGTAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp CAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCCATCCTCCGAGCCACTaGGGGCTGCATAGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: QCHTEPFTALTSPALHLLHPPSH*GLHSEG
Trigger: GCCTTCACTATGCAGCCCTCAGTGGCTCGGAGGATG...GAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp TGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACTGCTCTGCAGCCAGGTaGAGGGGCGTCTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: CQELKRTIPVGRDYRPLDCSAAR*RGVCCL
Trigger: TAGGCAGCAGACGCCCCTTCACCTGGCTGCAGAGCA...GTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR TCA 90 bp CAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCTCATGTCCACCAGGCTaGCATGGTTGCTGCGGACGG +
Preference number: 4 (lower is better)
Translates to: QCHTEPFTALTSPALHLLSCPPG*HGCCGR
Trigger: CCGTCCGCAGCAACCATGTCAGCCTGGTGGACATGA...GAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp CAAGATCAGAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGGCCTGGCTACCTGGGTaGGGGCATTCACGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QDQNLVCCLEASIHSGFRAWLPG*GHSRCS
Trigger: GGAGCACCGTGAATGCCCTCACCCAGGTAGCCAGGC...CCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp GCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATAGCAGACGCACAGCCTaGTCGTGCCCTGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: ADSTESSHVLFSTHSFPDSRRTA*SCPAPA
Trigger: TGCAGGTGCAGGGCACGAGCAGGCTGTGCGTCTGCT...ATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR GCA 90 bp CAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCAGACCTTCCGCATTCTaGTCCTCCAGGTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: QCHTEPFTALTSPALHLLRPSAF*SSRSSP
Trigger: CGGGCTGGACCTGGAGGAGCAGAATGCGGAAGGTCT...GAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTAAGACCTTCCGCATTCTaGTCCTCCAGGTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LLPRSLYSLRVQESLWPLRPSAF*SSRSSP
Trigger: CGGGCTGGACCTGGAGGAGCAGAATGCGGAAGGTCT...TAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp CTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCAGACCTTCCGCATTCTaGTCCTCCAGGTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LVCCLEASIHSGFRNPCGRPSAF*SSRSSP
Trigger: CGGGCTGGACCTGGAGGAGCAGAATGCGGAAGGTCT...GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp ACTGAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACCTCGAACAGCGCTTTaGTGGGGTTCTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: TENSFSHPVPAPLFPIILPRTAL*WGSHQP
Trigger: CGGCTGGTGAGAACCCCAGCAAAGCGCTGTTCGAGG...TAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp GAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACTAGCCAGCACAGGCACATaGCCTTTTTGGGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: ENSFSHPVPAPLFPIILLASTGT*PFWAAQ
Trigger: CTGCGCAGCCCAAAAAGGCCATGTGCCTGTGCTGGC...TAGTAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp GCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCGCCAGCACAGGCACATaGCCTTTTTGGGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: AKSSKGPYLLDGITGPWTASTGT*PFWAAQ
Trigger: CTGCGCAGCCCAAAAAGGCCATGTGCCTGTGCTGGC...GGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp CAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCTCCACCAGGCTGACATaGTTGCTGCGGACGGCCACT +
Preference number: 4 (lower is better)
Translates to: QCHTEPFTALTSPALHLLSTRLT*LLRTAT
Trigger: AGTGGCCGTCCGCAGCAACCATGTCAGCCTGGTGGA...GAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp CCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCCACGTGCCTGAAGGTCTaGCCCCTCCGGTTACATGGC +
Preference number: 4 (lower is better)
Translates to: PRAQKDHTCWTGLQALGPTCLKV*PLRLHG
Trigger: GCCATGTAACCGGAGGGGCCAGACCTTCAGGCACGT...GGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTATaGCTCAGCAGCCAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LLPRSLYSLRVQESLWPLLPTWL*LSSQEP
Trigger: CGGCTCTTGGCTGCTGAGCCATAGCCATGTCGGCAG...TAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp TGCACACAGTCAGGGTGGGATCCTCCAGCAGCCGAATGCAGGGCAGTCAGACCTGTAGTCCCAGCCTCTTaGGAGGCTGAGTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: CTQSGWDPPAAECRAVRPVVPAS*EAESGK
Trigger: TTTTCCTGACTCAGCCTCCCAAGAGGCTGGGACTAC...AGGTCTGACTGCCCTGCATTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR TCA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTAGAGGTCCCACGTGCCTaGAGGTCTGGCCCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: CWTGLQALGPILMKKISVEVPRA*RSGPSG
Trigger: ACCGGAGGGGCCAGACCTTCAGGCACGTGGGACCTC...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACGCTCCTCCTGCATCCTaGCGCTCCGCAGCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYAPPAS*RSAAPA
Trigger: CGCAGGGGCTGCGGAGCGGCAGGATGCAGGAGGAGC...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR GCA 90 bp CAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCTCAGCTCCTGCATCCTaGCGACATTGTTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: QCHTEPFTALTSPALHLLSAPAS*RHCSGG
Trigger: CCCGCCAGAACAATGTCGGCAGGATGCAGGAGCTGA...GAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR GCA 90 bp GGCTCAGAGAGGTTAAGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAACCTCCAGCAGCCGAATaGAGGGCAGTCAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: GSERLSNLLQVTGLSSGEPPAAE*RAVRPS
Trigger: GGAAGGTCTGACTGCCCTGCATTCGGCTGCTGGAGG...TTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp CTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCCCTGTGGCCGTTACTaGCGACATGGCTATGGCTCA +
Preference number: 4 (lower is better)
Translates to: LVCCLEASIHSGFRNPCGPCGRY*RHGYGS
Trigger: TGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGG...GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp AGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCGCCAGCACAGGCACATaGCCTTTTTGGGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: SNLLQVTGLSSGEAKIRTASTGT*PFWAAQ
Trigger: CTGCGCAGCCCAAAAAGGCCATGTGCCTGTGCTGGC...GGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496660.5
CDS-3UTR CCA 90 bp GCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATCCCAGCTTGTCTACGTaGTCCAGGGCCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: ADSTESSHVLFSTHSFPDPSLST*SRATSS
Trigger: GGAGGATGTGGCCCTGGACCACGTAGACAAGCTGGG...ATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp GTGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGATCCACCAGGCTGACATaGTTGCTGCGGACGGCCACT +
Preference number: 4 (lower is better)
Translates to: VPRAQKDHTCWTGLQALGSTRLT*LLRTAT
Trigger: AGTGGCCGTCCGCAGCAACCATGTCAGCCTGGTGGA...TCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp CAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCTCCCAGAGGGATCACTaGGGTGGTCCTTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: QCHTEPFTALTSPALHLLSQRDH*GGPSPI
Trigger: GATGGGAGAAGGACCACCCCAGTGATCCCTCTGGGA...GAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp TCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGGTCCCTCCTGCCAATaGCCACGAGGCCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: SKGPYLLDGITGPWTHPHGPSCQ*PRGPRT
Trigger: TGTTCGAGGGCCTCGTGGCCATTGGCAGGAGGGACC...ATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp GAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATCTGCCGACATGGCTATaGCTCAGCAGCCAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: EASIHSGFRNPCGRYCRHLPTWL*LSSQEP
Trigger: CGGCTCTTGGCTGCTGAGCCATAGCCATGTCGGCAG...ATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp CAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTCTGCTGCCCCGTTACTGCCGACATaGCTATGGCTCAGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: QVTGLSSGEAKIRTLSAAPLLPT*LWLSSQ
Trigger: TTGGCTGCTGAGCCATAGCCATGTCGGCAGTAACGG...GGCAGCAGACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTAAGCTTCATCAGTGGGTaGGAGCTCTGGAGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLPRSLYSLRVQESLWPLSFISG*ELWSQG
Trigger: CCCCTGACTCCAGAGCTCCCACCCACTGATGAAGCT...TAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR TCA 90 bp CAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTCTGCTGCCGTGGATCTTGGCCCCTaGGTTTACCAAGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: QVTGLSSGEAKIRTLSAAVDLGP*VYQDLE
Trigger: CTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCAC...GGCAGCAGACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR TCA 90 bp CCCTCCTTGTCTTTGACATTGTGGTCACAGCCAGAGCCCACGAGGAAGTCCAGACCAGGTCCTCCATTATaGACGCCAGCACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: PSLSLTLWSQPEPTRKSRPGPPL*TPAQAH
Trigger: ATGTGCCTGTGCTGGCGTTCATAATGGAGGACCTGG...TCTGGACTTCCTCGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR TCA 90 bp GAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACTACGACATGTGCCTCCGTaGACTCCCAGGAATATGCCA +
Preference number: 4 (lower is better)
Translates to: ENSFSHPVPAPLFPIILLRHVPP*TPRNMP
Trigger: TGGCATATTCCTGGGAGTTCACGGAGGCACATGTCG...TAGTAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp CAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCGGCACAAGAATCATTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QCHTEPFTALTSPALHLLGTRII*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAATGATTCTTGTGCC...GAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACCACGCCAGCTCCTCCTaGATCCTGCCGCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYHASSS*ILPLRS
Trigger: GCTGCGGAGCGGCAGGATGCAGGAGGAGCTGGCGTG...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR GCA 90 bp CATACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCCTGCCCGTGCTCAGCTaGCCTGTGAAACGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: HTCWTGLQALGPILMKKILPVLS*PVKRRP
Trigger: AGGACGGCGTTTCACAGGGCAGCTGAGCACGGGCAG...GATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR GCA 90 bp CAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCATGTCCACAAGTCGCTaGAGCACAGCCATATGGCCC +
Preference number: 4 (lower is better)
Translates to: QCHTEPFTALTSPALHLLMSTSR*STAIWP
Trigger: GGGCCATATGGCTGTGCTGCAGCGACTTGTGGACAT...GAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTAATGTCCACAAGTCGCTaGAGCACAGCCATATGGCCC +
Preference number: 4 (lower is better)
Translates to: LLPRSLYSLRVQESLWPLMSTSR*STAIWP
Trigger: GGGCCATATGGCTGTGCTGCAGCGACTTGTGGACAT...TAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp AACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTAGACCTTCCGCATTCTaGTCCTCCAGGTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: NLVCCLEASIHSGFRNPCRPSAF*SSRSSP
Trigger: CGGGCTGGACCTGGAGGAGCAGAATGCGGAAGGTCT...ACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp TGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACTGCCCGTTGGCGCAGCCTCCTaGGTGGATGAGGACCCGAGA +
Preference number: 4 (lower is better)
Translates to: CPMSCTHHHSVIQNLSLPVGAAS*VDEDPR
Trigger: TCTCGGGTCCTCATCCACGCAGGAGGCTGCGCCAAC...GGGCAGTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp ACTGAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTAAGCACAGAACGGAGCTaGTGTGTTTCCTGCCGATGG +
Preference number: 4 (lower is better)
Translates to: TENSFSHPVPAPLFPIILSTERS*CVSCRW
Trigger: CCATCGGCAGGAAACACAGCAGCTCCGTTCTGTGCT...TAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp AGAAAAATTGAGCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACATGGCGGGCGGCCTCGTaGAGCTGCCTCTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: RKIEQIAQRAPTYSSAHTWRAAS*SCLSRG
Trigger: TCCTCTGGAGAGGCAGCTCCACGAGGCCGCCCGCCA...TGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGCTCAATTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR CCA 90 bp GAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACTATGGAGGATTCGTAAGTaGCCGAACCAGGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: ENSFSHPVPAPLFPIILLWRIRK*PNQADR
Trigger: CCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCA...TAGTAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp GAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACTAGGCACATGGCCTTTTTaGGCTGCGCAGTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: ENSFSHPVPAPLFPIILLGTWPF*AAQCSK
Trigger: CTTACTGCACTGCGCAGCCCAAAAAGGCCATGTGCC...TAGTAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp GCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCGGCACATGGCCTTTTTaGGCTGCGCAGTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: AKSSKGPYLLDGITGPWTGTWPF*AAQCSK
Trigger: CTTACTGCACTGCGCAGCCCAAAAAGGCCATGTGCC...GGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp CTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCGGCACATGGCCTTTTTaGGCTGCGCAGTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: LVCCLEASIHSGFRNPCGGTWPF*AAQCSK
Trigger: CTTACTGCACTGCGCAGCCCAAAAAGGCCATGTGCC...GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496660.5
CDS-3UTR CCA 90 bp CAAGATCAGAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGCCCAGCTTGTCTACGTaGTCCAGGGCCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: QDQNLVCCLEASIHSGFRPSLST*SRATSS
Trigger: GGAGGATGTGGCCCTGGACCACGTAGACAAGCTGGG...CCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp ACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTTGCACACAGTCAGGGTaGGATCCTCCAGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: TCSRSQGSAVEKPRSEPCCTQSG*DPPAAE
Trigger: TTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA...ACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp GGTCATCTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCAGCTTAGGTTTTTCTaGGTGAGGGCATTCACGGTG +
Preference number: 4 (lower is better)
Translates to: GHLLFRWLHTLRSHVPEGQLRFF*VRAFTV
Trigger: CACCGTGAATGCCCTCACCCAGAAAAACCTAAGCTG...ACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAGATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp TGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACTGCCCGCGCAGCCTCCTGCGTaGATGAGGACCCGAGACACA +
Preference number: 4 (lower is better)
Translates to: CPMSCTHHHSVIQNLSLPAQPPA*MRTRDT
Trigger: TGTGTCTCGGGTCCTCATCCACGCAGGAGGCTGCGC...GGGCAGTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp ACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGCGCAGCCTCCTGCGTaGATGAGGACCCGAGACACA +
Preference number: 4 (lower is better)
Translates to: TCWTGLQALGPILMKKISAQPPA*MRTRDT
Trigger: TGTGTCTCGGGTCCTCATCCACGCAGGAGGCTGCGC...ACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp GTGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGAGATGATCAACCACGTTaGCGCAGCCTCCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: VPRAQKDHTCWTGLQALGDDQPR*RSLLRG
Trigger: TCCACGCAGGAGGCTGCGCCAACGTGGTTGATCATC...TCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp CACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACAGGGGCTGCAGATACCTaGAGGCCAGCCGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: HRELPRTLQHTQFPRLLTGAADT*RPAATA
Trigger: TGCTGTGGCGGCTGGCCTCCAGGTATCTGCAGCCCC...TGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp GGTCATCTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCAAACATTTGCCTCCTaGGCTCTGCATGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: GHLLFRWLHTLRSHVPEGQTFAS*ALHDCA
Trigger: TGCACAGTCATGCAGAGCCCAGGAGGCAAATGTTTG...ACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAGATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp CTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCCGTTACTGCCGACATaGCTATGGCTCAGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LVCCLEASIHSGFRNPCGPLLPT*LWLSSQ
Trigger: TTGGCTGCTGAGCCATAGCCATGTCGGCAGTAACGG...GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTAGTTCAGGAATCCCTGTaGCCGTTACTGCCGACATGG +
Preference number: 4 (lower is better)
Translates to: LLPRSLYSLRVQESLWPLVQESL*PLLPTW
Trigger: CCATGTCGGCAGTAACGGCCACAGGGATTCCTGAAC...TAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp CCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTGTTCAGGAATCCCTGTaGCCGTTACTGCCGACATGG +
Preference number: 4 (lower is better)
Translates to: PLFTQGSGIPVAVTADMAVQESL*PLLPTW
Trigger: CCATGTCGGCAGTAACGGCCACAGGGATTCCTGAAC...AGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CCA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTAAGTGGGTGGGAGCTCTaGAGTCAGGGGAAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLPRSLYSLRVQESLWPLSGWEL*SQGKRL
Trigger: AAGCCTTTTCCCCTGACTCCAGAGCTCCCACCCACT...TAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR TCA 90 bp TCACAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCCAGGTCCTCCATTATaGACGCCAGCACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: SQCHTEPFTALTSPALHLPGPPL*TPAQAH
Trigger: ATGTGCCTGTGCTGGCGTTCATAATGGAGGACCTGG...GAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp GGTCATCTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTAGTCAACCCCAGCAATaGGGAGCATATCTGCTATGT +
Preference number: 4 (lower is better)
Translates to: GHLLFRWLHTLRSHVPEGSQPQQ*GAYLLC
Trigger: ACATAGCAGATATGCTCCTCATTGCTGGGGTTGACT...ACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAGATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR TCA 90 bp GCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATCGACATGTGCCTCCGTaGACTCCCAGGAATATGCCA +
Preference number: 4 (lower is better)
Translates to: ADSTESSHVLFSTHSFPDRHVPP*TPRNMP
Trigger: TGGCATATTCCTGGGAGTTCACGGAGGCACATGTCG...ATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CCAGGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAAGTGCAGGGCCACCCTaGCCACGTGGTTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PGHRGEFLLAELMSTTGRSAGPP*PRGFWP
Trigger: GGGCCAGAAACCACGTGGGCAGGGTGGCCCTGCACT...TCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483400.5
CDS-3UTR GCA 90 bp ACTGAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTAAGGTCAGGCCATCCTTaGTCTCACAGTGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: TENSFSHPVPAPLFPIILRSGHP*SHSGSW
Trigger: CCAAGATCCACTGTGAGAGCAAGGATGGCCTGACCT...TAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp GGCTCAGAGAGGTTAAGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAATTTTGGGCTGCGCAGTaGAGTAAGGTCAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GSERLSNLLQVTGLSSGEFWAAQ*SKVRPS
Trigger: GGATGGCCTGACCTTACTGCACTGCGCAGCCCAAAA...TTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTCTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496660.5
CDS-3UTR GCA 90 bp TCACAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCATGTCCACAAGTCGCTaGAGCACAGCCATATGGCCC +
Preference number: 4 (lower is better)
Translates to: SQCHTEPFTALTSPALHLMSTSR*STAIWP
Trigger: GGGCCATATGGCTGTGCTGCAGCGACTTGTGGACAT...GAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CATACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCCCTCCAGCAGCCGAATaGAGGGCAGTCAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: HTCWTGLQALGPILMKKIPPAAE*RAVRPS
Trigger: GGAAGGTCTGACTGCCCTGCATTCGGCTGCTGGAGG...GATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR GCA 90 bp GGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTGCCAGGCGTGCTCTaGAGCCAGGTGAAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: GFDQCPMSCTHHHSVIQNLPGVL*SQVKGR
Trigger: ACGCCCCTTCACCTGGCTGCAGAGCACGCCTGGCAG...GTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TCACAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCATATCTGCTATGTCCTaGCAGGCGTGCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SQCHTEPFTALTSPALHLISAMS*QACSAA
Trigger: GGCTGCAGAGCACGCCTGGCAGGACATAGCAGATAT...GAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp GAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACTATCCTCTCACTGCCCTTaGAGCTCCTGGAAATCACTG +
Preference number: 4 (lower is better)
Translates to: ENSFSHPVPAPLFPIILLSSHCP*SSWKSL
Trigger: CAGTGATTTCCAGGAGCTGCAAGGGCAGTGAGAGGA...TAGTAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CAAGATCAGAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGCCCTGTGGCCGTTACTaGCGACATGGCTATGGCTCA +
Preference number: 4 (lower is better)
Translates to: QDQNLVCCLEASIHSGFRPCGRY*RHGYGS
Trigger: TGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGG...CCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp AGAAAAATTGAGCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACACTGCCGACATTGTTCTaGCGGGCGGCCTCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RKIEQIAQRAPTYSSAHTLPTLF*RAASWS
Trigger: GCTCCACGAGGCCGCCCGCCAGAACAATGTCGGCAG...TGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGCTCAATTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR CCA 90 bp TGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACTGCCCGCCACCCTGCCCACGTaGTTTCTGGCCCTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: CPMSCTHHHSVIQNLSLPATLPT*FLALVL
Trigger: TAACACCAGGGCCAGAAACCACGTGGGCAGGGTGGC...GGGCAGTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR CCA 90 bp ACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTTGGAGGATTCGTAAGTaGCCGAACCAGGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: TCSRSQGSAVEKPRSEPCWRIRK*PNQADR
Trigger: CCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCA...ACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp ACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTCCCAGCTTGTCTACGTaGTCCAGGGCCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: TCWTGLQALGPILMKKISPSLST*SRATSS
Trigger: GGAGGATGTGGCCCTGGACCACGTAGACAAGCTGGG...ACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp TCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATTGCACACAGTCAGGGTaGGATCCTCCAGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: SKGPYLLDGITGPWTHPHCTQSG*DPPAAE
Trigger: TTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA...ATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp CAAGATCAGAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGTGCACACAGTCAGGGTaGGATCCTCCAGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: QDQNLVCCLEASIHSGFRCTQSG*DPPAAE
Trigger: TTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA...CCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp GCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATGCTCCTGATAGCTCCTaGTGCCTGTCCACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: ADSTESSHVLFSTHSFPDAPDSS*CLSTVA
Trigger: AGCAACAGTGGACAGGCACCAGGAGCTATCAGGAGC...ATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGGATTTCAGTCCCATATaGTACAAAATACCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPDFSPI*YKIPFP
Trigger: TGGGAAAGGTATTTTGTACCATATGGGACTGAAATC...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR CCA 90 bp TGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCATCTTCTGTTCAGGTaGCTCCACACGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: CQELKRTIPVGRDYRPLDHLLFR*LHTLRS
Trigger: GGACCTCAGCGTGTGGAGCCACCTGAACAGAAGATG...GTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
3UTR CAA 72 bp ACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTaGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: TGLSSGEAKIRT*SAASKPLFTQG
Trigger: ACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR TCA 90 bp GGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACACAGACGTGCCTCTGTaGGGGCCCCTACCGCATCCT +
Preference number: 4 (lower is better)
Translates to: GFDQCPMSCTHHHSVIQNTDVPL*GPLPHP
Trigger: AGGATGCGGTAGGGGCCCTCACAGAGGCACGTCTGT...GTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR TCA 90 bp TGTGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGGTGGATCTTGGCCCCTaGGTTTACCAAGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: CAKSSKGPYLLDGITGPWVDLGP*VYQDLE
Trigger: CTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCAC...CCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR TCA 90 bp GCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATTCCCCTCCTTGTCTTTaGCATTGTGGTCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: ADSTESSHVLFSTHSFPDSPPCL*HCGHSQ
Trigger: CTGGCTGTGACCACAATGTCAAAGACAAGGAGGGGA...ATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp TGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACTCCCCTCCTTGTCTTTaGCATTGTGGTCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: CQELKRTIPVGRDYRPLDSPPCL*HCGHSQ
Trigger: CTGGCTGTGACCACAATGTCAAAGACAAGGAGGGGA...GTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR TCA 90 bp TTGAGGTGTTGGGCCCTATTATGTCCTGGGCACTGTGTTAGGTATTTAATCCTCCGACCAGCAGCCAGATaGAGGGCAGTGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LRCWALLCPGHCVRYLILRPAAR*RAVFPS
Trigger: GGAGGGGAACACTGCCCTTCATCTGGCTGCTGGTCG...GAGGATTAAATACCTAACACAGTGCCCAGGACATAATAGGGCCCAACACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR TCA 90 bp TGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAACATCCTCCGAGCCACTaGGGGCTGCATAGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: WTGLQALGPILMKKISVQHPPSH*GLHSEG
Trigger: GCCTTCACTATGCAGCCCTCAGTGGCTCGGAGGATG...TTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR TCA 90 bp CCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTTGCTCTGCAGCCAGGTaGAGGGGCGTCTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: PRTLQHTQFPRLLTSGISCSAAR*RGVCCL
Trigger: TAGGCAGCAGACGCCCCTTCACCTGGCTGCAGAGCA...ACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp CACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACACGCCATGCAGCCAAATaGGCAGCATTCGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: HRELPRTLQHTQFPRLLTRHAAK*AAFGGR
Trigger: ACGGCCACCGAATGCTGCTCATTTGGCTGCATGGCG...TGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTAGTGCAGGGCCACCCTaGCCACGTGGTTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLSAGPP*PRGFWP
Trigger: GGGCCAGAAACCACGTGGGCAGGGTGGCCCTGCACT...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR GCA 90 bp GAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGAGGTCAGGCCATCCTTaGTCTCACAGTGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: EPCLLPRSLYSLRVQESLRSGHP*SHSGSW
Trigger: CCAAGATCCACTGTGAGAGCAAGGATGGCCTGACCT...CAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496660.5
CDS-3UTR GCA 90 bp CCAGGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGACTGCCCGTGCTCAGCTaGCCTGTGAAACGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: PGHRGEFLLAELMSTTGRLPVLS*PVKRRP
Trigger: AGGACGGCGTTTCACAGGGCAGCTGAGCACGGGCAG...TCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496660.5
CDS-3UTR GCA 90 bp TGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAACCTCCAGCAGCCGAATaGAGGGCAGTCAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: WTGLQALGPILMKKISVQPPAAE*RAVRPS
Trigger: GGAAGGTCTGACTGCCCTGCATTCGGCTGCTGGAGG...TTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TTTAAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTGGCTCCACACGCTGCTGCCAGGCGTGCTCTaGAGCCAGGTGAAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: FKKPLNDGHLLFRWLHTLLPGVL*SQVKGR
Trigger: ACGCCCCTTCACCTGGCTGCAGAGCACGCCTGGCAG...CAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp GAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACTAAATGAGGAGCATATCTaGTATGTCCTGCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: ENSFSHPVPAPLFPIILLNEEHI*YVLPGV
Trigger: CACGCCTGGCAGGACATAGCAGATATGCTCCTCATT...TAGTAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp GGTCATCTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTAGGGCGGTTTTTCCCTaGTTATCTCTCAGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: GHLLFRWLHTLRSHVPEGRAVFP*LSLRFK
Trigger: CTTAAACCTGAGAGATAAGCAGGGAAAAACCGCCCT...ACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAGATGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp ACTGAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTAAGCTGCTGTGTTTCCTaGCGATGGTCCTGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: TENSFSHPVPAPLFPIILSCCVS*RWSCLK
Trigger: CTTTAAGCAGGACCATCGGCAGGAAACACAGCAGCT...TAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACATTCCACTCACGGGGCTaGAGATACCTGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LDGITGPWTHPHEKDQCTFHSRG*RYLEAS
Trigger: GCTGGCCTCCAGGTATCTGCAGCCCCGTGAGTGGAA...TGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp ACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGATGGCGTCGACATGTaGCTCCGTGAACTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TCWTGLQALGPILMKKISDGVDM*LRELPG
Trigger: TCCTGGGAGTTCACGGAGGCACATGTCGACGCCATC...ACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR GCA 90 bp TCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGTGCCTGTCCACTGTTaGTCGATGGCGTCGACATGT +
Preference number: 4 (lower is better)
Translates to: SKGPYLLDGITGPWTHPHVPVHC*SMASTC
Trigger: ACATGTCGACGCCATCGAGCAACAGTGGACAGGCAC...ATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR GCA 90 bp GCCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTCCTGATAGCTCCTGGTaGCTGTCCACTGTTGCTCGA +
Preference number: 4 (lower is better)
Translates to: ACWTGLQALGPILMKKISPDSSW*LSTVAR
Trigger: TCGAGCAACAGTGGACAGGCACCAGGAGCTATCAGG...ACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR GCA 90 bp CATACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCGCCGTGGCCACGCCATaGAGCCAAATGAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: HTCWTGLQALGPILMKKIAVATP*SQMSSI
Trigger: AATGCTGCTCATTTGGCTGCATGGCGTGGCCACGGC...GATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR GCA 90 bp ACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAACACCGGTTACATGGCTGTaGACCTCCTGGGGGCACTCG +
Preference number: 4 (lower is better)
Translates to: TGLQALGPILMKKISVQTPVTWL*TSWGHS
Trigger: CGAGTGCCCCCAGGAGGTGCACAGCCATGTAACCGG...TGTTTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp GGCTCAGAGAGGTTAAGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAACTAACAGGGCCAGGTaGAATGGCTATCCCGCCTAT +
Preference number: 4 (lower is better)
Translates to: GSERLSNLLQVTGLSSGETNRAR*NGYPAY
Trigger: ATAGGCGGGATAGCCATTGCACCTGGCCCTGTTAGT...TTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTCTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp AGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCACTAACAGGGCCAGGTaGAATGGCTATCCCGCCTAT +
Preference number: 4 (lower is better)
Translates to: SNLLQVTGLSSGEAKIRTTNRAR*NGYPAY
Trigger: ATAGGCGGGATAGCCATTGCACCTGGCCCTGTTAGT...GGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp CAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTCTGCTGCCGTGACCCTGAGAAAGTaGCCTCAAAGCTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: QVTGLSSGEAKIRTLSAAVTLRK*PQSSSF
Trigger: AAAACTGGAGCTTTGAGGGCACTTTCTCAGGGTCAC...GGCAGCAGACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CCA 90 bp CTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCTTGTCTTTGACATTGTaGTCACAGCCAGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: LVCCLEASIHSGFRNPCGLSLTL*SQPEPT
Trigger: CGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAA...GCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACGGTCCCTCCTGCCAATaGCCACGAGGCCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYGPSCQ*PRGPRT
Trigger: TGTTCGAGGGCCTCGTGGCCATTGGCAGGAGGGACC...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp ACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTGTGGTAGCCCCTCCGGTTACATaGCTGTGCACCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TLQHTQFPRLLTSGISVVAPPVT*LCTSWG
Trigger: CCCCCAGGAGGTGCACAGCCATGTAACCGGAGGGGC...TACCACACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR CCA 90 bp GGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGAGGAGGGCCTGGCTACCTaGGTGAGGGCATTCACGGTG +
Preference number: 4 (lower is better)
Translates to: GHRGEFLLAELMSTTGREEGLAT*VRAFTV
Trigger: CACCGTGAATGCCCTCACCCAGGTAGCCAGGCCCTC...CTCTCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CCA 90 bp TGCACACAGTCAGGGTGGGATCCTCCAGCAGCCGAATGCAGGGCAGTCAGACCTTGGGTGGAATTTTTCTaGGGTAACAGTTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: CTQSGWDPPAAECRAVRPWVEFF*GNSYEG
Trigger: CCCTTCATAACTGTTACCCCAGAAAAATTCCACCCA...AGGTCTGACTGCCCTGCATTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR TCA 90 bp CAAGATCAGAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGGTGGATCTTGGCCCCTaGGTTTACCAAGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: QDQNLVCCLEASIHSGFRVDLGP*VYQDLE
Trigger: CTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCAC...CCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR TCA 90 bp TTTAAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTGGCTCCACACGCTGTGCTCTGCAGCCAGGTaGAGGGGCGTCTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: FKKPLNDGHLLFRWLHTLCSAAR*RGVCCL
Trigger: TAGGCAGCAGACGCCCCTTCACCTGGCTGCAGAGCA...CAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR TCA 90 bp GGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACTCATGTCCACCAGGCTaGCATGGTTGCTGCGGACGG +
Preference number: 4 (lower is better)
Translates to: GFDQCPMSCTHHHSVIQNSCPPG*HGCCGR
Trigger: CCGTCCGCAGCAACCATGTCAGCCTGGTGGACATGA...GTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp ACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAACACGCCATGCAGCCAAATaGGCAGCATTCGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: TGLQALGPILMKKISVQTRHAAK*AAFGGR
Trigger: ACGGCCACCGAATGCTGCTCATTTGGCTGCATGGCG...TGTTTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR TCA 90 bp TCACAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCCTGGGCTCTGCATaGCTGTGCATTTCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: SQCHTEPFTALTSPALHLLLGSA*LCISVE
Trigger: TTCTACTGAAATGCACAGTCATGCAGAGCCCAGGAG...GAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR GCA 90 bp CATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGAGAGAAGCAGACGCACAGCCTaGTCGTGCCCTGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: HRGEFLLAELMSTTGRERSRRTA*SCPAPA
Trigger: TGCAGGTGCAGGGCACGAGCAGGCTGTGCGTCTGCT...TCTCTCTCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483400.5
CDS-3UTR GCA 90 bp CATACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCTTTTGGGCTGCGCAGTaGAGTAAGGTCAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: HTCWTGLQALGPILMKKIFWAAQ*SKVRPS
Trigger: GGATGGCCTGACCTTACTGCACTGCGCAGCCCAAAA...GATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR GCA 90 bp TGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACTGCCCTTTTGGGCTGCGCAGTaGAGTAAGGTCAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: CPMSCTHHHSVIQNLSLPFWAAQ*SKVRPS
Trigger: GGATGGCCTGACCTTACTGCACTGCGCAGCCCAAAA...GGGCAGTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TTTAAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTGGCTCCACACGCTGCTGCCCGTGCTCAGCTaGCCTGTGAAACGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: FKKPLNDGHLLFRWLHTLLPVLS*PVKRRP
Trigger: AGGACGGCGTTTCACAGGGCAGCTGAGCACGGGCAG...CAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGACCTTCCGCATTCTaGTCCTCCAGGTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYRPSAF*SSRSSP
Trigger: CGGGCTGGACCTGGAGGAGCAGAATGCGGAAGGTCT...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACCCTCCAGCAGCCGAATaGAGGGCAGTCAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYPPAAE*RAVRPS
Trigger: GGAAGGTCTGACTGCCCTGCATTCGGCTGCTGGAGG...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CCAGGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGACCTCCAGCAGCCGAATaGAGGGCAGTCAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: PGHRGEFLLAELMSTTGRPPAAE*RAVRPS
Trigger: GGAAGGTCTGACTGCCCTGCATTCGGCTGCTGGAGG...TCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR GCA 90 bp TGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACTGCCCAAGGCAGGGAAGTTGTaGCTCACAGCGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: CPMSCTHHHSVIQNLSLPKAGKL*LTARCR
Trigger: TCTGCACCTCGCTGTGAGGCACAACTTCCCTGCCTT...GGGCAGTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp AGAAAAATTGAGCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACATTCCACTCACGGGGCTaGAGATACCTGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RKIEQIAQRAPTYSSAHTFHSRG*RYLEAS
Trigger: GCTGGCCTCCAGGTATCTGCAGCCCCGTGAGTGGAA...TGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGCTCAATTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTTTCCACTCACGGGGCTaGAGATACCTGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PRTLQHTQFPRLLTSGISFHSRG*RYLEAS
Trigger: GCTGGCCTCCAGGTATCTGCAGCCCCGTGAGTGGAA...ACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACTTGCCTCCTGGGCTCTaGATGACTGTGCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: CQELKRTIPVGRDYRPLDLPPGL*MTVHFS
Trigger: ACTGAAATGCACAGTCATGCAGAGCCCAGGAGGCAA...GTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR GCA 90 bp AGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTGGCCTTTTTGGGCTTaGTCTCACAGTGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: SNLLQVTGLSSGEAKIRTWPFWA*SHSGSW
Trigger: CCAAGATCCACTGTGAGAGCAAGCCCAAAAAGGCCA...GGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CCA 90 bp CAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCGAGTTTACCAAGATCTaGAGGATTCGTAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QCHTEPFTALTSPALHLLEFTKI*RIRKWP
Trigger: CGGCCACTTACGAATCCTCCAGATCTTGGTAAACTC...GAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp GCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCGAGTTTACCAAGATCTaGAGGATTCGTAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: AKSSKGPYLLDGITGPWTEFTKI*RIRKWP
Trigger: CGGCCACTTACGAATCCTCCAGATCTTGGTAAACTC...GGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp ACTGAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTATCTCACAGTGGATCTTaGCCCCTGAGTTTACCAAGA +
Preference number: 4 (lower is better)
Translates to: TENSFSHPVPAPLFPIILSHSGS*PLSLPR
Trigger: TCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGA...TAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTATCTCACAGTGGATCTTaGCCCCTGAGTTTACCAAGA +
Preference number: 4 (lower is better)
Translates to: LLPRSLYSLRVQESLWPLSHSGS*PLSLPR
Trigger: TCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGA...TAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp CACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACATGCACACAGTCAGGGTaGGATCCTCCAGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: HRELPRTLQHTQFPRLLTCTQSG*DPPAAE
Trigger: TTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA...TGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp CACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACAGATGATCAACCACGTTaGCGCAGCCTCCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: HRELPRTLQHTQFPRLLTDDQPR*RSLLRG
Trigger: TCCACGCAGGAGGCTGCGCCAACGTGGTTGATCATC...TGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTATCCCAGAGGGATCACTaGGGTGGTCCTTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: CWTGLQALGPILMKKISVSQRDH*GGPSPI
Trigger: GATGGGAGAAGGACCACCCCAGTGATCCCTCTGGGA...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACGGTTCTCACCAGCCGTaGCCACGCCATGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYGSHQP*PRHAAK
Trigger: TTTGGCTGCATGGCGTGGCCACGGCTGGTGAGAACC...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACCGAACAGCGCTTTGCTaGGGTTCTCACCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYRTALC*GSHQPW
Trigger: CCACGGCTGGTGAGAACCCCAGCAAAGCGCTGTTCG...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp ACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACCGAACAGCGCTTTGCTaGGGTTCTCACCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TNAQCHVPTITVSYRTFHRTALC*GSHQPW
Trigger: CCACGGCTGGTGAGAACCCCAGCAAAGCGCTGTTCG...GTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp TGTGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGCAAACATTTGCCTCCTaGGCTCTGCATGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: CAKSSKGPYLLDGITGPWQTFAS*ALHDCA
Trigger: TGCACAGTCATGCAGAGCCCAGGAGGCAAATGTTTG...CCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp GTGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGAAAGGACCATACCTGTTaGACGGGATTACAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: VPRAQKDHTCWTGLQALGKDHTC*TGLQAL
Trigger: AAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTT...TCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CCA 90 bp AACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGTAGTCCCAGCCTCTTaGGAGGCTGAGTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: NLVCCLEASIHSGFRNPCVVPAS*EAESGK
Trigger: TTTTCCTGACTCAGCCTCCCAAGAGGCTGGGACTAC...ACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp ACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTGAAAAGCTTCATCAGTaGGTGGGAGCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: TCSRSQGSAVEKPRSEPCEKLHQ*VGALES
Trigger: TGACTCCAGAGCTCCCACCCACTGATGAAGCTTTTC...ACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CCA 90 bp CAAGATCAGAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGGGCACATGGCCTTTTTaGGCTTGCTCTCACAGTGGA +
Preference number: 4 (lower is better)
Translates to: QDQNLVCCLEASIHSGFRGTWPF*ACSHSG
Trigger: TCCACTGTGAGAGCAAGCCCAAAAAGGCCATGTGCC...CCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR TCA 90 bp TTTAAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTGGCTCCACACGCTGTCATGTCCACCAGGCTaGCATGGTTGCTGCGGACGG +
Preference number: 4 (lower is better)
Translates to: FKKPLNDGHLLFRWLHTLSCPPG*HGCCGR
Trigger: CCGTCCGCAGCAACCATGTCAGCCTGGTGGACATGA...CAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR TCA 90 bp GGTCATCTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTTTGGACCCATCCTCATaGAAAAGATCAGTGTACAAA +
Preference number: 4 (lower is better)
Translates to: GHLLFRWLHTLRSHVPEGLDPSS*KRSVYK
Trigger: TTTGTACACTGATCTTTTTCATGAGGATGGGTCCAA...ACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAGATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTAATGTCCACAAGTCGCTaGAGCACAGCCATATGGCCC +
Preference number: 4 (lower is better)
Translates to: CWTGLQALGPILMKKISVMSTSR*STAIWP
Trigger: GGGCCATATGGCTGTGCTGCAGCGACTTGTGGACAT...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAAAGGCAGGGAAGTTGTaGCTCACAGCGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: WTGLQALGPILMKKISVQKAGKL*LTARCR
Trigger: TCTGCACCTCGCTGTGAGGCACAACTTCCCTGCCTT...TTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTAATATCTGCTATGTCCTaGCAGGCGTGCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CWTGLQALGPILMKKISVISAMS*QACSAA
Trigger: GGCTGCAGAGCACGCCTGGCAGGACATAGCAGATAT...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACACCTGATAGCTCCTGGTaGCTGTCCACTGTTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LDGITGPWTHPHEKDQCTPDSSW*LSTVAR
Trigger: TCGAGCAACAGTGGACAGGCACCAGGAGCTATCAGG...TGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp ACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACGCCGTGGCCACGCCATaGAGCCAAATGAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: TNAQCHVPTITVSYRTFHAVATP*SQMSSI
Trigger: AATGCTGCTCATTTGGCTGCATGGCGTGGCCACGGC...GTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTGCCGTGGCCACGCCATaGAGCCAAATGAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: PRTLQHTQFPRLLTSGISAVATP*SQMSSI
Trigger: AATGCTGCTCATTTGGCTGCATGGCGTGGCCACGGC...ACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TTTAAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTGGCTCCACACGCTGCCTCGAACAGCGCTTTaGTGGGGTTCTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: FKKPLNDGHLLFRWLHTLPRTAL*WGSHQP
Trigger: CGGCTGGTGAGAACCCCAGCAAAGCGCTGTTCGAGG...CAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TGCATGACTGTGCATTTCAGTAGAATCACCTGGAGGTCTGTTAACAGTGATTTTCAGCCAGGTCCCTCCTaGCAATGGCCACGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CMTVHFSRITWRSVNSDFQPGPS*QWPRGP
Trigger: AGGGCCTCGTGGCCATTGGCAGGAGGGACCTGGCTG...AAAATCACTGTTAACAGACCTCCAGGTGATTCTACTGAAATGCACAGTCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACTGCCCTCCTCTCACTGCCCTTaGAGCTCCTGGAAATCACTG +
Preference number: 4 (lower is better)
Translates to: CPMSCTHHHSVIQNLSLPSSHCP*SSWKSL
Trigger: CAGTGATTTCCAGGAGCTGCAAGGGCAGTGAGAGGA...GGGCAGTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp ACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAACAGGGGGCACTCGGGGCTaGGTTTGCTTTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: TGLQALGPILMKKISVQTGGTRG*VCFLPD
Trigger: ATCAGGAAGAAAGCAAACGCAGCCCCGAGTGCCCCC...TGTTTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp GCCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTTTGCCTCCTGGGCTCTaGATGACTGTGCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: ACWTGLQALGPILMKKISLPPGL*MTVHFS
Trigger: ACTGAAATGCACAGTCATGCAGAGCCCAGGAGGCAA...ACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR CCA 90 bp TTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACATGGAGGATTCGTAAGTaGCCGAACCAGGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: LDGITGPWTHPHEKDQCTWRIRK*PNQADR
Trigger: CCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCA...TGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp TGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAATGGAGGATTCGTAAGTaGCCGAACCAGGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: WTGLQALGPILMKKISVQWRIRK*PNQADR
Trigger: CCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCA...TTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp AAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGAGTTTACCAAGATCTaGAGGATTCGTAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: KPLFTQGSGIPVAVTADMEFTKI*RIRKWP
Trigger: CGGCCACTTACGAATCCTCCAGATCTTGGTAAACTC...CATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp GGCTCAGAGAGGTTAAGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAATCTCACAGTGGATCTTaGCCCCTGAGTTTACCAAGA +
Preference number: 4 (lower is better)
Translates to: GSERLSNLLQVTGLSSGESHSGS*PLSLPR
Trigger: TCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGA...TTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTCTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp ACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTGTGGTACCCAGCTTGTCTACGTaGTCCAGGGCCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: TLQHTQFPRLLTSGISVVPSLST*SRATSS
Trigger: GGAGGATGTGGCCCTGGACCACGTAGACAAGCTGGG...TACCACACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp CCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTTCCCAGAGGGATCACTaGGGTGGTCCTTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: PRTLQHTQFPRLLTSGISSQRDH*GGPSPI
Trigger: GATGGGAGAAGGACCACCCCAGTGATCCCTCTGGGA...ACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp CCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTTCCACTGTTGCTCGATaGCGTCGACATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: PRTLQHTQFPRLLTSGISSTVAR*RRHVPP
Trigger: CGGAGGCACATGTCGACGCCATCGAGCAACAGTGGA...ACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp CCAGGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAAGCTTCATCAGTGGGTaGGAGCTCTGGAGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGHRGEFLLAELMSTTGRSFISG*ELWSQG
Trigger: CCCCTGACTCCAGAGCTCCCACCCACTGATGAAGCT...TCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CCA 90 bp CAAGATCAGAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGGAAAAGCTTCATCAGTaGGTGGGAGCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QDQNLVCCLEASIHSGFREKLHQ*VGALES
Trigger: TGACTCCAGAGCTCCCACCCACTGATGAAGCTTTTC...CCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR TCA 90 bp ACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAACACCAGGTCCTCCATTATaGACGCCAGCACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: TGLQALGPILMKKISVQTPGPPL*TPAQAH
Trigger: ATGTGCCTGTGCTGGCGTTCATAATGGAGGACCTGG...TGTTTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR TCA 90 bp CCAGGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGACCAGGTCCTCCATTATaGACGCCAGCACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: PGHRGEFLLAELMSTTGRPGPPL*TPAQAH
Trigger: ATGTGCCTGTGCTGGCGTTCATAATGGAGGACCTGG...TCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496660.5
CDS-3UTR TCA 90 bp AGAAAAATTGAGCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACACCAGGTCCTCCATTATaGACGCCAGCACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: RKIEQIAQRAPTYSSAHTPGPPL*TPAQAH
Trigger: ATGTGCCTGTGCTGGCGTTCATAATGGAGGACCTGG...TGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGCTCAATTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp CACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACATTAGGTTTTTCTGGGTaGGGGCATTCACGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HRELPRTLQHTQFPRLLTLGFSG*GHSRCS
Trigger: GGAGCACCGTGAATGCCCTCACCCAGAAAAACCTAA...TGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp CCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTGGCACAAGAATCATTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PRTLQHTQFPRLLTSGISGTRII*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAATGATTCTTGTGCC...ACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACTTTTGGGCTGCGCAGTaGAGTAAGGTCAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYFWAAQ*SKVRPS
Trigger: GGATGGCCTGACCTTACTGCACTGCGCAGCCCAAAA...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TTGAGGTGTTGGGCCCTATTATGTCCTGGGCACTGTGTTAGGTATTTAATCCTCATGTCCACAAGTCGCTaGAGCACAGCCATATGGCCC +
Preference number: 4 (lower is better)
Translates to: LRCWALLCPGHCVRYLILMSTSR*STAIWP
Trigger: GGGCCATATGGCTGTGCTGCAGCGACTTGTGGACAT...GAGGATTAAATACCTAACACAGTGCCCAGGACATAATAGGGCCCAACACCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAAGGCAGGGAAGTTGTaGCTCACAGCGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYKAGKL*LTARCR
Trigger: TCTGCACCTCGCTGTGAGGCACAACTTCCCTGCCTT...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACATATCTGCTATGTCCTaGCAGGCGTGCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYISAMS*QACSAA
Trigger: GGCTGCAGAGCACGCCTGGCAGGACATAGCAGATAT...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TCACAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCAGGGCGGTTTTTCCCTaGTTATCTCTCAGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: SQCHTEPFTALTSPALHLRAVFP*LSLRFK
Trigger: CTTAAACCTGAGAGATAAGCAGGGAAAAACCGCCCT...GAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp ACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTTCCTGCCGATGGTCCTaGTTAAAGGACAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TCWTGLQALGPILMKKISSCRWS*LKDKLF
Trigger: GAAGAGCTTGTCCTTTAAGCAGGACCATCGGCAGGA...ACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR GCA 90 bp GGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACAGCACAGAACGGAGCTaGTGTGTTTCCTGCCGATGG +
Preference number: 4 (lower is better)
Translates to: GFDQCPMSCTHHHSVIQNSTERS*CVSCRW
Trigger: CCATCGGCAGGAAACACAGCAGCTCCGTTCTGTGCT...GTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TTTAAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTGGCTCCACACGCTGGATGGCGTCGACATGTaGCTCCGTGAACTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FKKPLNDGHLLFRWLHTLDGVDM*LRELPG
Trigger: TCCTGGGAGTTCACGGAGGCACATGTCGACGCCATC...CAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp AGAAAAATTGAGCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTGCCTGTCCACTGTTaGTCGATGGCGTCGACATGT +
Preference number: 4 (lower is better)
Translates to: RKIEQIAQRAPTYSSAHTVPVHC*SMASTC
Trigger: ACATGTCGACGCCATCGAGCAACAGTGGACAGGCAC...TGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGCTCAATTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACCCTGATAGCTCCTGGTaGCTGTCCACTGTTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYPDSSW*LSTVAR
Trigger: TCGAGCAACAGTGGACAGGCACCAGGAGCTATCAGG...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TTTAAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTGGCTCCACACGCTGGGGGGCACTCGGGGCTaGGTTTGCTTTCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: FKKPLNDGHLLFRWLHTLGGTRG*VCFLPD
Trigger: ATCAGGAAGAAAGCAAACGCAGCCCCGAGTGCCCCC...CAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTTAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TGCATGACTGTGCATTTCAGTAGAATCACCTGGAGGTCTGTTAACAGTGATTTTCCGGTTACATGGCTGTaGACCTCCTGGGGGCACTCG +
Preference number: 4 (lower is better)
Translates to: CMTVHFSRITWRSVNSDFPVTWL*TSWGHS
Trigger: CGAGTGCCCCCAGGAGGTGCACAGCCATGTAACCGG...AAAATCACTGTTAACAGACCTCCAGGTGATTCTACTGAAATGCACAGTCATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp CAAGATCAGAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGGTGACCCTGAGAAAGTaGCCTCAAAGCTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: QDQNLVCCLEASIHSGFRVTLRK*PQSSSF
Trigger: AAAACTGGAGCTTTGAGGGCACTTTCTCAGGGTCAC...CCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CCA 90 bp TTGAGGTGTTGGGCCCTATTATGTCCTGGGCACTGTGTTAGGTATTTAATCCTCTGGAGGATTCGTAAGTaGCCGAACCAGGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: LRCWALLCPGHCVRYLILWRIRK*PNQADR
Trigger: CCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCA...GAGGATTAAATACCTAACACAGTGCCCAGGACATAATAGGGCCCAACACCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACGGCACATGGCCTTTTTaGGCTGCGCAGTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYGTWPF*AAQCSK
Trigger: CTTACTGCACTGCGCAGCCCAAAAAGGCCATGTGCC...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp ACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTGTGGTAGATGATCAACCACGTTaGCGCAGCCTCCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: TLQHTQFPRLLTSGISVVDDQPR*RSLLRG
Trigger: TCCACGCAGGAGGCTGCGCCAACGTGGTTGATCATC...TACCACACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp TTTAAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTGGCTCCACACGCTGTCCACTGTTGCTCGATaGCGTCGACATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: FKKPLNDGHLLFRWLHTLSTVAR*RRHVPP
Trigger: CGGAGGCACATGTCGACGCCATCGAGCAACAGTGGA...CAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp ACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACGCTCCTGATAGCTCCTaGTGCCTGTCCACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TNAQCHVPTITVSYRTFHAPDSS*CLSTVA
Trigger: AGCAACAGTGGACAGGCACCAGGAGCTATCAGGAGC...GTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp TTGAGGTGTTGGGCCCTATTATGTCCTGGGCACTGTGTTAGGTATTTAATCCTCCCGTTACTGCCGACATaGCTATGGCTCAGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LRCWALLCPGHCVRYLILPLLPT*LWLSSQ
Trigger: TTGGCTGCTGAGCCATAGCCATGTCGGCAGTAACGG...GAGGATTAAATACCTAACACAGTGCCCAGGACATAATAGGGCCCAACACCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp GGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGAGGTTCAGGAATCCCTGTaGCCGTTACTGCCGACATGG +
Preference number: 4 (lower is better)
Translates to: GHRGEFLLAELMSTTGREVQESL*PLLPTW
Trigger: CCATGTCGGCAGTAACGGCCACAGGGATTCCTGAAC...CTCTCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR TCA 90 bp ACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACGTGGATCTTGGCCCCTaGGTTTACCAAGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: TNAQCHVPTITVSYRTFHVDLGP*VYQDLE
Trigger: CTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCAC...GTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp TTGAGGTGTTGGGCCCTATTATGTCCTGGGCACTGTGTTAGGTATTTAATCCTCTCCCCTCCTTGTCTTTaGCATTGTGGTCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRCWALLCPGHCVRYLILSPPCL*HCGHSQ
Trigger: CTGGCTGTGACCACAATGTCAAAGACAAGGAGGGGA...GAGGATTAAATACCTAACACAGTGCCCAGGACATAATAGGGCCCAACACCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR TCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACTCCCCTCCTTGTCTTTaGCATTGTGGTCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYSPPCL*HCGHSQ
Trigger: CTGGCTGTGACCACAATGTCAAAGACAAGGAGGGGA...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp ACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTAGTCAACCCCAGCAATaGGGAGCATATCTGCTATGT +
Preference number: 4 (lower is better)
Translates to: TCWTGLQALGPILMKKISSQPQQ*GAYLLC
Trigger: ACATAGCAGATATGCTCCTCATTGCTGGGGTTGACT...ACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR TCA 90 bp CAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCTCGCTCCTGGAAATCACTaGTCTTTTTACTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: QCHTEPFTALTSPALHLLAPGNH*SFYCLC
Trigger: ACAAAGACAGTAAAAAGATCAGTGATTTCCAGGAGC...GAGGAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp TTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACACTCCTGGGCTCTGCATaGCTGTGCATTTCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LDGITGPWTHPHEKDQCTLLGSA*LCISVE
Trigger: TTCTACTGAAATGCACAGTCATGCAGAGCCCAGGAG...TGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TTGAGGTGTTGGGCCCTATTATGTCCTGGGCACTGTGTTAGGTATTTAATCCTCCTCCCAATCAGCTCCTaGATCCTGCCGACATTGTTC +
Preference number: 4 (lower is better)
Translates to: LRCWALLCPGHCVRYLILLPISS*ILPTLF
Trigger: GAACAATGTCGGCAGGATGCAGGAGCTGATTGGGAG...GAGGATTAAATACCTAACACAGTGCCCAGGACATAATAGGGCCCAACACCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR GCA 90 bp CACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATTATTAACAAATGAGGAGCATATCTaGTATGTCCTGCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: HRELPRTLQHTQFPRLLTNEEHI*YVLPGV
Trigger: CACGCCTGGCAGGACATAGCAGATATGCTCCTCATT...TGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TGCATGACTGTGCATTTCAGTAGAATCACCTGGAGGTCTGTTAACAGTGATTTTCCTCGAACAGCGCTTTaGTGGGGTTCTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: CMTVHFSRITWRSVNSDFPRTAL*WGSHQP
Trigger: CGGCTGGTGAGAACCCCAGCAAAGCGCTGTTCGAGG...AAAATCACTGTTAACAGACCTCCAGGTGATTCTACTGAAATGCACAGTCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp TGCATGACTGTGCATTTCAGTAGAATCACCTGGAGGTCTGTTAACAGTGATTTTGCCAGCACAGGCACATaGCCTTTTTGGGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: CMTVHFSRITWRSVNSDFASTGT*PFWAAQ
Trigger: CTGCGCAGCCCAAAAAGGCCATGTGCCTGTGCTGGC...AAAATCACTGTTAACAGACCTCCAGGTGATTCTACTGAAATGCACAGTCATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp TTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACATTGTCTTTGACATTGTaGTCACAGCCAGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: LDGITGPWTHPHEKDQCTLSLTL*SQPEPT
Trigger: CGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAA...TGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTCATCTTCTGTTCAGGTaGCTCCACACGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLHLLFR*LHTLRS
Trigger: GGACCTCAGCGTGTGGAGCCACCTGAACAGAAGATG...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR CCA 90 bp CCAGGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGTAGTCCCAGCCTCTTaGGAGGCTGAGTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PGHRGEFLLAELMSTTGRVVPAS*EAESGK
Trigger: TTTTCCTGACTCAGCCTCCCAAGAGGCTGGGACTAC...TCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CCA 90 bp GGCTCAGAGAGGTTAAGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAATGGGTGGAATTTTTCTaGGGTAACAGTTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: GSERLSNLLQVTGLSSGEWVEFF*GNSYEG
Trigger: CCCTTCATAACTGTTACCCCAGAAAAATTCCACCCA...TTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTCTGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp CATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGAGAGAAGTGGGTGGGAGCTCTaGAGTCAGGGGAAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: HRGEFLLAELMSTTGRERSGWEL*SQGKRL
Trigger: AAGCCTTTTCCCCTGACTCCAGAGCTCCCACCCACT...TCTCTCTCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR TCA 90 bp ATCACTGATCTTTTTACTGTCTTTGTAGTTTTGCCTGTTCCAGCATGTCATATCCGACCAGCAGCCAGATaGAGGGCAGTGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ITDLFTVFVVLPVPACHIRPAAR*RAVFPS
Trigger: GGAGGGGAACACTGCCCTTCATCTGGCTGCTGGTCG...GATATGACATGCTGGAACAGGCAAAACTACAAAGACAGTAAAAAGATCAGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTCTCCCAATCAGCTCCTaGATCCTGCCGACATTGTTC +
Preference number: 4 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLLPISS*ILPTLF
Trigger: GAACAATGTCGGCAGGATGCAGGAGCTGATTGGGAG...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR GCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACTCCTGCCGATGGTCCTaGTTAAAGGACAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYSCRWS*LKDKLF
Trigger: GAAGAGCTTGTCCTTTAAGCAGGACCATCGGCAGGA...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp ACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAACAAGCTGCTGTGTTTCCTaGCGATGGTCCTGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: TGLQALGPILMKKISVQTSCCVS*RWSCLK
Trigger: CTTTAAGCAGGACCATCGGCAGGAAACACAGCAGCT...TGTTTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp CATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGAGAGAACTAACAGGGCCAGGTaGAATGGCTATCCCGCCTAT +
Preference number: 4 (lower is better)
Translates to: HRGEFLLAELMSTTGRERTNRAR*NGYPAY
Trigger: ATAGGCGGGATAGCCATTGCACCTGGCCCTGTTAGT...TCTCTCTCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CCA 90 bp GGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGAGTTGTCTTTGACATTGTaGTCACAGCCAGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: GHRGEFLLAELMSTTGRELSLTL*SQPEPT
Trigger: CGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAA...CTCTCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496660.5
CDS-3UTR CCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACCAGCTTAGGTTTTTCTaGGTGAGGGCATTCACGGTG +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYQLRFF*VRAFTV
Trigger: CACCGTGAATGCCCTCACCCAGAAAAACCTAAGCTG...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp TGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAGGGATTACAGGCCCTTaGACCCATCCTCATGAAAAA +
Preference number: 4 (lower is better)
Translates to: WTGLQALGPILMKKISVQGITGP*THPHEK
Trigger: TTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCC...TTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR TCA 90 bp TGCATGACTGTGCATTTCAGTAGAATCACCTGGAGGTCTGTTAACAGTGATTTTCGACATGTGCCTCCGTaGACTCCCAGGAATATGCCA +
Preference number: 4 (lower is better)
Translates to: CMTVHFSRITWRSVNSDFRHVPP*TPRNMP
Trigger: TGGCATATTCCTGGGAGTTCACGGAGGCACATGTCG...AAAATCACTGTTAACAGACCTCCAGGTGATTCTACTGAAATGCACAGTCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR TCA 90 bp TGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACTGCCCGGTTTAGAGAAAAATTaGGCAGATAGCACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: CPMSCTHHHSVIQNLSLPGLEKN*ADSTES
Trigger: GCTCTCTGTGCTATCTGCTCAATTTTTCTCTAAACC...GGGCAGTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TTTAAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTGGCTCCACACGCTGAATGAGGAGCATATCTaGTATGTCCTGCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: FKKPLNDGHLLFRWLHTLNEEHI*YVLPGV
Trigger: CACGCCTGGCAGGACATAGCAGATATGCTCCTCATT...CAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp ACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTGTGGTATCCTGCCGATGGTCCTaGTTAAAGGACAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TLQHTQFPRLLTSGISVVSCRWS*LKDKLF
Trigger: GAAGAGCTTGTCCTTTAAGCAGGACCATCGGCAGGA...TACCACACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTAATGGGTTTTGACCAATaGCCAATGTCATGTACCCAC +
Preference number: 4 (lower is better)
Translates to: CWTGLQALGPILMKKISVMGFDQ*PMSCTH
Trigger: GTGGGTACATGACATTGGGCATTGGTCAAAACCCAT...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR GCA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTATCCAGTTTTCTCATCTaGAAAATGGGTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: LLPRSLYSLRVQESLWPLSSFLI*KMGGIF
Trigger: AAAAATTCCACCCATTTTGCAGATGAGAAAACTGGA...TAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR GCA 90 bp CCCTCCTTGTCTTTGACATTGTGGTCACAGCCAGAGCCCACGAGGAAGTCCAGATCCAGTTTTCTCATCTaGAAAATGGGTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: PSLSLTLWSQPEPTRKSRSSFLI*KMGGIF
Trigger: AAAAATTCCACCCATTTTGCAGATGAGAAAACTGGA...TCTGGACTTCCTCGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACGAGTTTACCAAGATCTaGAGGATTCGTAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYEFTKI*RIRKWP
Trigger: CGGCCACTTACGAATCCTCCAGATCTTGGTAAACTC...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp ACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAACATCTCACAGTGGATCTTaGCCCCTGAGTTTACCAAGA +
Preference number: 4 (lower is better)
Translates to: TGLQALGPILMKKISVQTSHSGS*PLSLPR
Trigger: TCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGA...TGTTTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTTGTCTTTGACATTGTaGTCACAGCCAGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLLSLTL*SQPEPT
Trigger: CGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAA...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp ACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAACATGTGTTTCCTGCCGATaGTCCTGCTTAAAGGACAAG +
Preference number: 4 (lower is better)
Translates to: TGLQALGPILMKKISVQTCVSCR*SCLKDK
Trigger: CTTGTCCTTTAAGCAGGACCATCGGCAGGAAACACA...TGTTTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp TTCCAGCATGTCATATCCTTTCAGTTTTCAGTAAGTAACACTCTCACACATTTCGGTTCTCACCAGCCGTaGCCACGCCATGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: FQHVISFQFSVSNTLTHFGSHQP*PRHAAK
Trigger: TTTGGCTGCATGGCGTGGCCACGGCTGGTGAGAACC...GAAATGTGTGAGAGTGTTACTTACTGAAAACTGAAAGGATATGACATGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp ATCACTGATCTTTTTACTGTCTTTGTAGTTTTGCCTGTTCCAGCATGTCATATCACGTGCCTGAAGGTCTaGCCCCTCCGGTTACATGGC +
Preference number: 4 (lower is better)
Translates to: ITDLFTVFVVLPVPACHITCLKV*PLRLHG
Trigger: GCCATGTAACCGGAGGGGCCAGACCTTCAGGCACGT...GATATGACATGCTGGAACAGGCAAAACTACAAAGACAGTAAAAAGATCAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR TCA 90 bp TGCATGACTGTGCATTTCAGTAGAATCACCTGGAGGTCTGTTAACAGTGATTTTTTAGGTTTTTCTGGGTaGGGGCATTCACGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CMTVHFSRITWRSVNSDFLGFSG*GHSRCS
Trigger: GGAGCACCGTGAATGCCCTCACCCAGAAAAACCTAA...AAAATCACTGTTAACAGACCTCCAGGTGATTCTACTGAAATGCACAGTCATGCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR TCA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTAGTCAACCCCAGCAATaGGGAGCATATCTGCTATGT +
Preference number: 4 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLSQPQQ*GAYLLC
Trigger: ACATAGCAGATATGCTCCTCATTGCTGGGGTTGACT...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TTCCAGCATGTCATATCCTTTCAGTTTTCAGTAAGTAACACTCTCACACATTTCGATGGCGTCGACATGTaGCTCCGTGAACTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FQHVISFQFSVSNTLTHFDGVDM*LRELPG
Trigger: TCCTGGGAGTTCACGGAGGCACATGTCGACGCCATC...GAAATGTGTGAGAGTGTTACTTACTGAAAACTGAAAGGATATGACATGCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp GAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTCCAGTTTTCTCATCTaGAAAATGGGTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: EPCLLPRSLYSLRVQESLSSFLI*KMGGIF
Trigger: AAAAATTCCACCCATTTTGCAGATGAGAAAACTGGA...CAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CCA 90 bp TTCCAGCATGTCATATCCTTTCAGTTTTCAGTAAGTAACACTCTCACACATTTCTGCACACAGTCAGGGTaGGATCCTCCAGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: FQHVISFQFSVSNTLTHFCTQSG*DPPAAE
Trigger: TTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCA...GAAATGTGTGAGAGTGTTACTTACTGAAAACTGAAAGGATATGACATGCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTGTGTTTCCTGCCGATaGTCCTGCTTAAAGGACAAG +
Preference number: 4 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLCVSCR*SCLKDK
Trigger: CTTGTCCTTTAAGCAGGACCATCGGCAGGAAACACA...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTAGCTCCTGGAAATCACTaGTCTTTTTACTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: CWTGLQALGPILMKKISVAPGNH*SFYCLC
Trigger: ACAAAGACAGTAAAAAGATCAGTGATTTCCAGGAGC...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR TCA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACGGTTTAGAGAAAAATTaGGCAGATAGCACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYGLEKN*ADSTES
Trigger: GCTCTCTGTGCTATCTGCTCAATTTTTCTCTAAACC...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR TCA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTATTGGACCCATCCTCATaGAAAAGATCAGTGTACAAA +
Preference number: 4 (lower is better)
Translates to: CWTGLQALGPILMKKISVLDPSS*KRSVYK
Trigger: TTTGTACACTGATCTTTTTCATGAGGATGGGTCCAA...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR GCA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTAGGGCGGTTTTTCCCTaGTTATCTCTCAGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLRAVFP*LSLRFK
Trigger: CTTAAACCTGAGAGATAAGCAGGGAAAAACCGCCCT...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp TGCATGACTGTGCATTTCAGTAGAATCACCTGGAGGTCTGTTAACAGTGATTTTTCTCACAGTGGATCTTaGCCCCTGAGTTTACCAAGA +
Preference number: 4 (lower is better)
Translates to: CMTVHFSRITWRSVNSDFSHSGS*PLSLPR
Trigger: TCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGA...AAAATCACTGTTAACAGACCTCCAGGTGATTCTACTGAAATGCACAGTCATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CCA 90 bp CATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGAGAGATGGGTGGAATTTTTCTaGGGTAACAGTTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: HRGEFLLAELMSTTGRERWVEFF*GNSYEG
Trigger: CCCTTCATAACTGTTACCCCAGAAAAATTCCACCCA...TCTCTCTCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CCA 90 bp TTCCAGCATGTCATATCCTTTCAGTTTTCAGTAAGTAACACTCTCACACATTTCTTGTCTTTGACATTGTaGTCACAGCCAGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: FQHVISFQFSVSNTLTHFLSLTL*SQPEPT
Trigger: CGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAA...GAAATGTGTGAGAGTGTTACTTACTGAAAACTGAAAGGATATGACATGCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp ATCACTGATCTTTTTACTGTCTTTGTAGTTTTGCCTGTTCCAGCATGTCATATCTGTGTTTCCTGCCGATaGTCCTGCTTAAAGGACAAG +
Preference number: 4 (lower is better)
Translates to: ITDLFTVFVVLPVPACHICVSCR*SCLKDK
Trigger: CTTGTCCTTTAAGCAGGACCATCGGCAGGAAACACA...GATATGACATGCTGGAACAGGCAAAACTACAAAGACAGTAAAAAGATCAGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CCA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTGATTTCAGTCCCATATaGTACAAAATACCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLDFSPI*YKIPFP
Trigger: TGGGAAAGGTATTTTGTACCATATGGGACTGAAATC...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR GCA 90 bp TTCCAGCATGTCATATCCTTTCAGTTTTCAGTAAGTAACACTCTCACACATTTCATGGGTTTTGACCAATaGCCAATGTCATGTACCCAC +
Preference number: 4 (lower is better)
Translates to: FQHVISFQFSVSNTLTHFMGFDQ*PMSCTH
Trigger: GTGGGTACATGACATTGGGCATTGGTCAAAACCCAT...GAAATGTGTGAGAGTGTTACTTACTGAAAACTGAAAGGATATGACATGCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
3UTR CAA 72 bp CTGGAAATCACTGATCTTTTTACTGTCTTTGTAGTTTaGCCTGTTCCAGCATGTCATATCCTTTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LEITDLFTVFVV*PVPACHILSVF
Trigger: GAAAACTGAAAGGATATGACATGCTGGAACAGGCAAAACTACAAAGACAGTAAAAAGATCAGTGATTTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS CCA 90 bp ATCAGCTCCTGCATCCTGCCGACATTGTTCTGGCGGGCGGCCTCGTaGAGCTGCCTCTCCAGAGGAAGCAGGCCGTCGGTCTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: ISSCILPTLFWRAAS*SCLSRGSRPSVSHA
Trigger: GGCGTGGGAGACCGACGGCCTGCTTCCTCTGGAGAGGCAGCTCCACGAGGCCGCCCGCCAGAACAATGTCGGCAGGATGCAGGAGCTGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000513267.2
CDS TCA 90 bp GGGCCAAGGCAAGGAGAGGACCAAGGGCACACAGACGTGCCTCTGTaGGGGCCCCTACCGCATCCTCCTCGTCCACAGCAGCCTCGTGCT +
Preference number: 5 (lower is better)
Translates to: GPRQGEDQGHTDVPL*GPLPHPPRPQQPRA
Trigger: AGCACGAGGCTGCTGTGGACGAGGAGGATGCGGTAGGGGCCCTCACAGAGGCACGTCTGTGTGCCCTTGGTCCTCTCCTTGCCTTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS GCA 90 bp TCTGTGAGGGCCCCTACCGCATCCTCCTCGTCCACAGCAGCCTCGTaGTCCAGAAGCAGACGCACAGCCTGCTCGTGCCCTGCACCTGCA +
Preference number: 5 (lower is better)
Translates to: SVRAPTASSSSTAAS*SRSRRTACSCPAPA
Trigger: TGCAGGTGCAGGGCACGAGCAGGCTGTGCGTCTGCTTCTGGAGCACGAGGCTGCTGTGGACGAGGAGGATGCGGTAGGGGCCCTCACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319580.13
ENST00000483400.5
ENST00000491145.5
CDS GCA 90 bp AGAGGCTGGGGCCAAGGCAAGGAGAGGACCAAGGGCACACAGACGTaGCTCTGTGAGGGCCCCTACCGCATCCTCCTCGTCCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: RGWGQGKERTKGTQT*LCEGPYRILLVHSS
Trigger: GCTGCTGTGGACGAGGAGGATGCGGTAGGGGCCCTCACAGAGGCACGTCTGTGTGCCCTTGGTCCTCTCCTTGCCTTGGCCCCAGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS-3UTR CAA 90 bp CTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCACCAGGCTGACATGGTaGCTGCGGACGGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: LLFRWLHTLRSHVPEGLATRLTW*LRTATA
Trigger: GGCAGTGGCCGTCCGCAGCAACCATGTCAGCCTGGT...GGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS GCA 90 bp TTCTGGGTGAGGGCATTCACGGTGCTCCCAGCCCTGAGGAGGAGCTaGACACAGTCAGGGTGGGATCCTCCAGCAGCCGAATGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: FWVRAFTVLPALRRS*TQSGWDPPAAECRA
Trigger: TGCCCTGCATTCGGCTGCTGGAGGATCCCACCCTGACTGTGTGCAGCTCCTCCTCAGGGCTGGGAGCACCGTGAATGCCCTCACCCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS GCA 90 bp CAGAGGAGAGGCACCCTGATGATCAACCACGTTGGCGCAGCCTCCTaGGTGGATGAGGACCCGAGACACATCCTCCGAGCCACTGAGGGC +
Preference number: 5 (lower is better)
Translates to: QRRGTLMINHVGAAS*VDEDPRHILRATEG
Trigger: GCCCTCAGTGGCTCGGAGGATGTGTCTCGGGTCCTCATCCACGCAGGAGGCTGCGCCAACGTGGTTGATCATCAGGGTGCCTCTCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000611260.1
ENST00000620154.4
CDS TCA 90 bp CTTTGCTGGGGTTCTCACCAGCCGTGGCCACGCCATGCAGCCAAATaGGCAGCATTCGGTGGCCGTGCTCCTGATAGCTCCTGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: LCWGSHQPWPRHAAK*AAFGGRAPDSSWCL
Trigger: CAGGCACCAGGAGCTATCAGGAGCACGGCCACCGAATGCTGCTCATTTGGCTGCATGGCGTGGCCACGGCTGGTGAGAACCCCAGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS TCA 90 bp TCATCTTCTGTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTaGAGGTCTGGCCCCTCCGGTTACATGGCTGTGCACCTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSSVQVAPHAEVPRA*RSGPSGYMAVHLLG
Trigger: CCCCAGGAGGTGCACAGCCATGTAACCGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAACAGAAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS GCA 90 bp ACGTGGTTTCTGGCCCTGGTGTTAACCCTCCTCCCAATCAGCTCCTaGATCCTGCCGACATTGTTCTGGCGGGCGGCCTCGTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: TWFLALVLTLLPISS*ILPTLFWRAASWSC
Trigger: GCAGCTCCACGAGGCCGCCCGCCAGAACAATGTCGGCAGGATGCAGGAGCTGATTGGGAGGAGGGTTAACACCAGGGCCAGAAACCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319580.13
ENST00000491145.5
ENST00000513267.2
CDS GCA 90 bp AGCGCATTCATCCCAAACGCATCCTCCTCGTCCACAGCAGCCTCGTaGTCCAGAAGCAGACGCACAGCCTGCTCGTGCCCTGCACCTGCA +
Preference number: 5 (lower is better)
Translates to: SAFIPNASSSSTAAS*SRSRRTACSCPAPA
Trigger: TGCAGGTGCAGGGCACGAGCAGGCTGTGCGTCTGCTTCTGGAGCACGAGGCTGCTGTGGACGAGGAGGATGCGTTTGGGATGAATGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS CCA 90 bp GAGATCTCGCCATTGTACTCCAGCCAGCCAGGTCCCTCCTGCCAATaGCCACGAGGCCCTCGAACAGCGCTTTGCTGGGGTTCTCACCAG +
Preference number: 5 (lower is better)
Translates to: EISPLYSSQPGPSCQ*PRGPRTALCWGSHQ
Trigger: CTGGTGAGAACCCCAGCAAAGCGCTGTTCGAGGGCCTCGTGGCCATTGGCAGGAGGGACCTGGCTGGCTGGAGTACAATGGCGAGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000395723.5
CDS-3UTR CAA 90 bp TCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTGCCGTCCTCCCCAGCTaGTCTACGTGGTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SAASKPLFTQGSGIPVAVAVLPS*STWSRA
Trigger: GGCCCTGGACCACGTAGACAAGCTGGGGAGGACGGC...AACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CAA 90 bp CCCTCCTTGTCTTTGACATTGTGGTCACAGCCAGAGCCCACGAGGAAGTCCAGAGAGCCGACCGCAGTCTaGGGAGGGCCTGGCTACCTG +
Preference number: 5 (lower is better)
Translates to: PSLSLTLWSQPEPTRKSREPTAV*GGPGYL
Trigger: CAGGTAGCCAGGCCCTCCCAAGACTGCGGTCGGCTC...TCTGGACTTCCTCGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS CCA 90 bp CCCAGGAATATGCCAGCTTCTTCCACTCACGGGGCTGCAGATACCTaGAGGCCAGCCGCCACAGCACAGAACGGAGCTGCTGTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PRNMPASSTHGAADT*RPAATAQNGAAVFP
Trigger: AGGAAACACAGCAGCTCCGTTCTGTGCTGTGGCGGCTGGCCTCCAGGTATCTGCAGCCCCGTGAGTGGAAGAAGCTGGCATATTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS CCA 90 bp TTAACCCTCCTCCCAATCAGCTCCTGCATCCTGCCGACATTGTTCTaGCGGGCGGCCTCGTGGAGCTGCCTCTCCAGAGGAAGCACTGTA +
Preference number: 5 (lower is better)
Translates to: LTLLPISSCILPTLF*RAASWSCLSRGSTV
Trigger: TACAGTGCTTCCTCTGGAGAGGCAGCTCCACGAGGCCGCCCGCCAGAACAATGTCGGCAGGATGCAGGAGCTGATTGGGAGGAGGGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS-3UTR CAA 90 bp ACTGAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTATGCATCCTGCCGACATaGTTCTGGCGGGCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: TENSFSHPVPAPLFPIILCILPT*FWRAAS
Trigger: CGAGGCCGCCCGCCAGAACAATGTCGGCAGGATGCA...TAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR CAA 90 bp TCACAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCGCCGTCCTCCCCAGCTaGTCTACGTGGTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SQCHTEPFTALTSPALHLAVLPS*STWSRA
Trigger: GGCCCTGGACCACGTAGACAAGCTGGGGAGGACGGC...GAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp GGCTCAGAGAGGTTAAGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCGTCCTCCCCAGCTaGTCTACGTGGTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GSERLSNLLQVTGLSSGEAVLPS*STWSRA
Trigger: GGCCCTGGACCACGTAGACAAGCTGGGGAGGACGGC...TTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CAA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGTTCCCCTCCTTGTCTTaGACATTGTGGTCACAGCCA +
Preference number: 5 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPFPSLS*TLWSQP
Trigger: TGGCTGTGACCACAATGTCAAAGACAAGGAGGGGAA...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS TCA 90 bp GCTTGTCTACGTGGTCCAGGGCCACATCCTCCAGGTCCTCCATTATaGACGCCAGCACAGGCACATGGCCTTTTTGGGCTGCGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: ACLRGPGPHPPGPPL*TPAQAHGLFGLRSA
Trigger: TGCACTGCGCAGCCCAAAAAGGCCATGTGCCTGTGCTGGCGTTCATAATGGAGGACCTGGAGGATGTGGCCCTGGACCACGTAGACAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000491145.5
ENST00000496660.5
ENST00000620154.4
CDS GCA 90 bp CCCAGCAATGAGGAGCATATCTGCTATGTCCTGCCAGGCGTGCTCTaGAGCCAGGTGAAGGGGCGTCTGCTGCCTATTGTCCACGGCATT +
Preference number: 5 (lower is better)
Translates to: PSNEEHICYVLPGVL*SQVKGRLLPIVHGI
Trigger: AATGCCGTGGACAATAGGCAGCAGACGCCCCTTCACCTGGCTGCAGAGCACGCCTGGCAGGACATAGCAGATATGCTCCTCATTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000611260.1
ENST00000620154.4
CDS GCA 90 bp CTGGAGGCCAGCCGCCACAGCACAGAACGGAGCTGCTGTGTTTCCTaGCGATGGTCCTGCTTAAAGGACAAGCTCTTCCCAGAGGGATCA +
Preference number: 5 (lower is better)
Translates to: LEASRHSTERSCCVS*RWSCLKDKLFPEGS
Trigger: TGATCCCTCTGGGAAGAGCTTGTCCTTTAAGCAGGACCATCGGCAGGAAACACAGCAGCTCCGTTCTGTGCTGTGGCGGCTGGCCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS-3UTR CAA 90 bp AGTGTTCCCCTCCTTGTCTTTGACATTGTGGTCACAGCCAGAGCCCACGAGGAATGCATCCTGCCGACATaGTTCTGGCGGGCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SVPLLVFDIVVTARAHEECILPT*FWRAAS
Trigger: CGAGGCCGCCCGCCAGAACAATGTCGGCAGGATGCA...TTCCTCGTGGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGAGGGGAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CAA 90 bp TCACAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCACCAGGCTGACATGGTaGCTGCGGACGGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: SQCHTEPFTALTSPALHLTRLTW*LRTATA
Trigger: GGCAGTGGCCGTCCGCAGCAACCATGTCAGCCTGGT...GAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS CCA 90 bp GCCACATCCTCCAGGTCCTCCATTATGAACGCCAGCACAGGCACATaGCCTTTTTGGGCTGCGCAGTGCAGTAAGGTCAGGCCATCCTTG +
Preference number: 5 (lower is better)
Translates to: ATSSRSSIMNASTGT*PFWAAQCSKVRPSL
Trigger: CAAGGATGGCCTGACCTTACTGCACTGCGCAGCCCAAAAAGGCCATGTGCCTGTGCTGGCGTTCATAATGGAGGACCTGGAGGATGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000491145.5
ENST00000496660.5
ENST00000620154.4
CDS-3UTR CAA 90 bp TCACAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCCCCTCGAACAGCGCTTaGCTGGGGTTCTCACCAGCC +
Preference number: 5 (lower is better)
Translates to: SQCHTEPFTALTSPALHLPSNSA*LGFSPA
Trigger: GGCTGGTGAGAACCCCAGCAAAGCGCTGTTCGAGGG...GAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS TCA 90 bp GCTTGTCTACGTGGTCCAGGGCCACATCCTCCAGGTCCTCCATTATaGACGCCAGCACAGGCACATGGCCTTTTTGGGCTTGCTCTCACA +
Preference number: 5 (lower is better)
Translates to: ACLRGPGPHPPGPPL*TPAQAHGLFGLALT
Trigger: TGTGAGAGCAAGCCCAAAAAGGCCATGTGCCTGTGCTGGCGTTCATAATGGAGGACCTGGAGGATGTGGCCCTGGACCACGTAGACAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS CCA 90 bp TCCAGGTCCTCCATTATGAACGCCAGCACAGGCACATGGCCTTTTTaGGCTGCGCAGTGCAGTAAGGTCAGGCCATCCTTGCTCTCACAG +
Preference number: 5 (lower is better)
Translates to: SRSSIMNASTGTWPF*AAQCSKVRPSLLSQ
Trigger: CTGTGAGAGCAAGGATGGCCTGACCTTACTGCACTGCGCAGCCCAAAAAGGCCATGTGCCTGTGCTGGCGTTCATAATGGAGGACCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000491145.5
ENST00000496660.5
ENST00000620154.4
CDS-3UTR CAA 90 bp TTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAGCCGTCCTCCCCAGCTaGTCTACGTGGTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LDGITGPWTHPHEKDQCTAVLPS*STWSRA
Trigger: GGCCCTGGACCACGTAGACAAGCTGGGGAGGACGGC...TGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CAA 90 bp GCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATACCAAGGCAGGGAAGTaGTGCCTCACAGCGAGGTGC +
Preference number: 5 (lower is better)
Translates to: ADSTESSHVLFSTHSFPDTKAGK*CLTARC
Trigger: GCACCTCGCTGTGAGGCACAACTTCCCTGCCTTGGT...ATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp GCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCACGTCACTGTCGGAGTaGATGAGGAGCCGGACCAAG +
Preference number: 5 (lower is better)
Translates to: AKSSKGPYLLDGITGPWTTSLSE*MRSRTK
Trigger: CTTGGTCCGGCTCCTCATCAACTCCGACAGTGACGT...GGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CAA 90 bp TCACAGTGTCATACAGAACCTTTCACTGCCCTAACATCCCCTGCGCTCCACCTCGGTGCCTGTCCACTGTaGCTCGATGGCGTCGACATG +
Preference number: 5 (lower is better)
Translates to: SQCHTEPFTALTSPALHLGACPL*LDGVDM
Trigger: CATGTCGACGCCATCGAGCAACAGTGGACAGGCACC...GAGGTGGAGCGCAGGGGATGTTAGGGCAGTGAAAGGTTCTGTATGACACTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGACTGTCTTTGTAGTTTaGCCTGTTCCAGCATGTCAT +
Preference number: 5 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPTVFVV*PVPACH
Trigger: ATGACATGCTGGAACAGGCAAAACTACAAAGACAGT...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR CAA 90 bp AGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCGCCAAGATCGCACCATaGCACTTCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: SNLLQVTGLSSGEAKIRTAKIAP*HFSLGD
Trigger: GTCGCCCAGGCTGAAGTGCAATGGTGCGATCTTGGC...GGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS CCA 90 bp GGCTTGCTCTCACAGTGGATCTTGGCCCCTGAGTTTACCAAGATCTaGAGGATTCGTAAGTGGCCGAACCAGGCAGACAGGAGAAGCGCA +
Preference number: 5 (lower is better)
Translates to: GLLSQWILAPEFTKI*RIRKWPNQADRRSA
Trigger: TGCGCTTCTCCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGAGCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CAA 90 bp CCAGGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGAGCCGACCGCAGTCTaGGGAGGGCCTGGCTACCTG +
Preference number: 5 (lower is better)
Translates to: PGHRGEFLLAELMSTTGREPTAV*GGPGYL
Trigger: CAGGTAGCCAGGCCCTCCCAAGACTGCGGTCGGCTC...TCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CAA 90 bp GGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGAGGAGCCGACCGCAGTCTaGGGAGGGCCTGGCTACCTG +
Preference number: 5 (lower is better)
Translates to: GHRGEFLLAELMSTTGREEPTAV*GGPGYL
Trigger: CAGGTAGCCAGGCCCTCCCAAGACTGCGGTCGGCTC...CTCTCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CAA 90 bp CAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTCTGCTGCCGAGAGGTTAAGTAACTaGCTCCAGGTCACAGGGCTC +
Preference number: 5 (lower is better)
Translates to: QVTGLSSGEAKIRTLSAAERLSN*LQVTGL
Trigger: GAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTC...GGCAGCAGACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CAA 90 bp TCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTAGGCACATGGCCTTTTaGGGCTTGCTCTCACAGTGG +
Preference number: 5 (lower is better)
Translates to: SAASKPLFTQGSGIPVAVRHMAF*GLLSQW
Trigger: CCACTGTGAGAGCAAGCCCAAAAAGGCCATGTGCCT...AACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS TCA 90 bp CACTGGGGTGGTCCTTATCTCTCAGGTTTAAGTCAACCCCAGCAATaGGGAGCATATCTGCTATGTCCTGCCAGGCGTGCTCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: HWGGPYLSGLSQPQQ*GAYLLCPARRALQP
Trigger: TGGCTGCAGAGCACGCCTGGCAGGACATAGCAGATATGCTCCTCATTGCTGGGGTTGACTTAAACCTGAGAGATAAGGACCACCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395723.5
CDS CCA 90 bp TCCTTGCTCTCACAGTGGATCTTGGCCCCTGAGTTTACCAAGATCTaGAGGATTCGTAAGTGGCCGAACCAGGCAGACAGGAGAAGCGCA +
Preference number: 5 (lower is better)
Translates to: SLLSQWILAPEFTKI*RIRKWPNQADRRSA
Trigger: TGCGCTTCTCCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGAGCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000491145.5
ENST00000496480.5
ENST00000496660.5
ENST00000620154.4
CDS CCA 90 bp TGGATCTTGGCCCCTGAGTTTACCAAGATCTGGAGGATTCGTAAGTaGCCGAACCAGGCAGACAGGAGAAGCGCATTCATCCCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: WILAPEFTKIWRIRK*PNQADRRSAFIPKA
Trigger: GGCCTTTGGGATGAATGCGCTTCTCCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496480.5
ENST00000496660.5
CDS-3UTR CAA 90 bp GAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACTACTCTCACAGTGGATCTaGGCCCCTGAGTTTACCAAG +
Preference number: 5 (lower is better)
Translates to: ENSFSHPVPAPLFPIILLLSQWI*APEFTK
Trigger: CTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGAG...TAGTAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp ACTGAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTAAAGGTCAGGCCATCCTaGCTCTCACAGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: TENSFSHPVPAPLFPIILKVRPS*LSQWIL
Trigger: CAAGATCCACTGTGAGAGCAAGGATGGCCTGACCTT...TAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp CTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTAAAGGTCAGGCCATCCTaGCTCTCACAGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: LLPRSLYSLRVQESLWPLKVRPS*LSQWIL
Trigger: CAAGATCCACTGTGAGAGCAAGGATGGCCTGACCTT...TAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496660.5
CDS-3UTR CAA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTGCCGTCCTCCCCAGCTaGTCTACGTGGTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLAVLPS*STWSRA
Trigger: GGCCCTGGACCACGTAGACAAGCTGGGGAGGACGGC...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp CACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTATGGCTCAGCAGTGTTCCCCTCCTaGTCTTTGACATTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: HSGFRNPCGRYCRHGYGSAVFPS*SLTLWS
Trigger: TGACCACAATGTCAAAGACAAGGAGGGGAACACTGC...TGAGCCATAGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CAA 90 bp GCCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGGCGTCTGCTGCCTATaGTCCACGGCATTCACGTCA +
Preference number: 5 (lower is better)
Translates to: ACWTGLQALGPILMKKISGVCCL*STAFTS
Trigger: TGACGTGAATGCCGTGGACAATAGGCAGCAGACGCC...ACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR CAA 90 bp TTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTGAAGGTCTGGCCCCTCCGATCAGTGTGGTACATTaGATACAACTGATGAACCAA +
Preference number: 5 (lower is better)
Translates to: FRWLHTLRSHVPEGLAPPISVVH*IQLMNQ
Trigger: TTGGTTCATCAGTTGTATCAAATGTACCACACTGAT...CGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR CAA 90 bp TCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTGAGAGGTTAAGTAACTaGCTCCAGGTCACAGGGCTC +
Preference number: 5 (lower is better)
Translates to: SAASKPLFTQGSGIPVAVERLSN*LQVTGL
Trigger: GAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTC...AACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS CCA 90 bp TGGATCTTGGCCCCTGAGTTTACCAAGATCTGGAGGATTCGTAAGTaGCCGAACCAGGCAGACAGGAGAAGCGCATTCATCCCAAACGCA +
Preference number: 5 (lower is better)
Translates to: WILAPEFTKIWRIRK*PNQADRRSAFIPNA
Trigger: TGCGTTTGGGATGAATGCGCTTCTCCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS-3UTR CAA 90 bp TGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCTCTCACAGTGGATCTaGGCCCCTGAGTTTACCAAG +
Preference number: 5 (lower is better)
Translates to: CQELKRTIPVGRDYRPLDLSQWI*APEFTK
Trigger: CTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGAG...GTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CAA 90 bp GCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAGTTTCCCCGATTCCTTGTCTTTGACATaGTGGTCACAGCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: ADSTESSHVLFSTHSFPDSLSLT*WSQPEP
Trigger: GGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGA...ATCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp GAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATTCCTTGTCTTTGACATaGTGGTCACAGCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: EASIHSGFRNPCGRYCRHSLSLT*WSQPEP
Trigger: GGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGA...ATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CAA 90 bp GAGAACTCTTTCTCCCACCCGGTCCCAGCCCCACTGTTCCCCATTATCCTACTATTCCCCTCCTTGTCTTaGACATTGTGGTCACAGCCA +
Preference number: 5 (lower is better)
Translates to: ENSFSHPVPAPLFPIILLFPSLS*TLWSQP
Trigger: TGGCTGTGACCACAATGTCAAAGACAAGGAGGGGAA...TAGTAGGATAATGGGGAACAGTGGGGCTGGGACCGGGTGGGAGAAAGAGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp TCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTTTCCCCTCCTTGTCTTaGACATTGTGGTCACAGCCA +
Preference number: 5 (lower is better)
Translates to: SAASKPLFTQGSGIPVAVFPSLS*TLWSQP
Trigger: TGGCTGTGACCACAATGTCAAAGACAAGGAGGGGAA...AACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CAA 90 bp TGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAACCAAGGCAGGGAAGTaGTGCCTCACAGCGAGGTGC +
Preference number: 5 (lower is better)
Translates to: WTGLQALGPILMKKISVQTKAGK*CLTARC
Trigger: GCACCTCGCTGTGAGGCACAACTTCCCTGCCTTGGT...TTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CAA 90 bp AGAAAAATTGAGCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACACCCTCGAACAGCGCTTaGCTGGGGTTCTCACCAGCC +
Preference number: 5 (lower is better)
Translates to: RKIEQIAQRAPTYSSAHTPSNSA*LGFSPA
Trigger: GGCTGGTGAGAACCCCAGCAAAGCGCTGTTCGAGGG...TGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGCTCAATTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp ACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAAACACCCTCGAACAGCGCTTaGCTGGGGTTCTCACCAGCC +
Preference number: 5 (lower is better)
Translates to: TGLQALGPILMKKISVQTPSNSA*LGFSPA
Trigger: GGCTGGTGAGAACCCCAGCAAAGCGCTGTTCGAGGG...TGTTTGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CAA 90 bp GAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGGAGAGGTTAAGTAACTaGCTCCAGGTCACAGGGCTC +
Preference number: 5 (lower is better)
Translates to: EPCLLPRSLYSLRVQESLERLSN*LQVTGL
Trigger: GAGCCCTGTGACCTGGAGCAAGTTACTTAACCTCTC...CAGGGATTCCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483400.5
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CAA 90 bp AGTAACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCCAGGGGAAAAGGCTTTaGAGACTCAGCTTTGCCTCG +
Preference number: 5 (lower is better)
Translates to: SNLLQVTGLSSGEAKIRTQGKRL*RLSFAS
Trigger: CGAGGCAAAGCTGAGTCTCAAAAGCCTTTTCCCCTG...GGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CAA 90 bp ACTTGCTCCAGGTCACAGGGCTCAGCAGTGGAGAAGCCAAGATCAGAACCTTGTCAGGGGAAAAGGCTTTaGAGACTCAGCTTTGCCTCG +
Preference number: 5 (lower is better)
Translates to: TCSRSQGSAVEKPRSEPCQGKRL*RLSFAS
Trigger: CGAGGCAAAGCTGAGTCTCAAAAGCCTTTTCCCCTG...ACAAGGTTCTGATCTTGGCTTCTCCACTGCTGAGCCCTGTGACCTGGAGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CAA 90 bp CCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCTATGGCCTTTTTGGGCTaGCTCTCACAGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: PLFTQGSGIPVAVTADMAMAFLG*LSQWIL
Trigger: CAAGATCCACTGTGAGAGCAAGCCCAAAAAGGCCAT...AGCCATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS TCA 90 bp CGGTTTTTCCCTGCTTATCTCTCAGGTTTAAGTCAACCCCAGCAATaGGGAGCATATCTGCTATGTCCTGCCAGGCGTGCTCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RFFPAYLSGLSQPQQ*GAYLLCPARRALQP
Trigger: TGGCTGCAGAGCACGCCTGGCAGGACATAGCAGATATGCTCCTCATTGCTGGGGTTGACTTAAACCTGAGAGATAAGCAGGGAAAAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000620154.4
CDS CCA 90 bp TGGATCTTGGCCCCTGAGTTTACCAAGATCTGGAGGATTCGTAAGTaGCCGAACCAGGCAGACAGGAGAAGCGCATTCATCCCAAAACAC +
Preference number: 5 (lower is better)
Translates to: WILAPEFTKIWRIRK*PNQADRRSAFIPKH
Trigger: GTGTTTTGGGATGAATGCGCTTCTCCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319580.13
CDS-3UTR CAA 90 bp CAAGATCAGAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGTCCTTGTCTTTGACATaGTGGTCACAGCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: QDQNLVCCLEASIHSGFRSLSLT*WSQPEP
Trigger: GGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGA...CCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CAA 90 bp TGTGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGTTCCCCTCCTTGTCTTaGACATTGTGGTCACAGCCA +
Preference number: 5 (lower is better)
Translates to: CAKSSKGPYLLDGITGPWFPSLS*TLWSQP
Trigger: TGGCTGTGACCACAATGTCAAAGACAAGGAGGGGAA...CCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CAA 90 bp GTGCCAAGAGCTCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGAGCAGTGTTCCCCTCCTaGTCTTTGACATTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: VPRAQKDHTCWTGLQALGAVFPS*SLTLWS
Trigger: TGACCACAATGTCAAAGACAAGGAGGGGAACACTGC...TCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGAGCTCTTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CAA 90 bp AAGCCTCTATTCACTCAGGGTTCAGGAATCCCTGTGGCCGTTACTGCCGACATGGCAGTGTTCCCCTCCTaGTCTTTGACATTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: KPLFTQGSGIPVAVTADMAVFPS*SLTLWS
Trigger: TGACCACAATGTCAAAGACAAGGAGGGGAACACTGC...CATGTCGGCAGTAACGGCCACAGGGATTCCTGAACCCTGAGTGAATAGAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CAA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACACCAAGGCAGGGAAGTaGTGCCTCACAGCGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYTKAGK*CLTARC
Trigger: GCACCTCGCTGTGAGGCACAACTTCCCTGCCTTGGT...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp TTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACAACGTCACTGTCGGAGTaGATGAGGAGCCGGACCAAG +
Preference number: 5 (lower is better)
Translates to: LDGITGPWTHPHEKDQCTTSLSE*MRSRTK
Trigger: CTTGGTCCGGCTCCTCATCAACTCCGACAGTGACGT...TGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CAA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTAGGCGTCTGCTGCCTATaGTCCACGGCATTCACGTCA +
Preference number: 5 (lower is better)
Translates to: CWTGLQALGPILMKKISVGVCCL*STAFTS
Trigger: TGACGTGAATGCCGTGGACAATAGGCAGCAGACGCC...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CAA 90 bp TCAAAAGGACCATACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATAAAGGACCATACCTGTaGGACGGGATTACAGGCCCT +
Preference number: 5 (lower is better)
Translates to: SKGPYLLDGITGPWTHPHKGPYL*DGITGP
Trigger: AGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTT...ATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATGGTCCTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS CCA 90 bp TGGATCTTGGCCCCTGAGTTTACCAAGATCTGGAGGATTCGTAAGTaGCCGAACCAGGCAGACAGGAGAAGCGCATTCATCCCAAATGAT +
Preference number: 5 (lower is better)
Translates to: WILAPEFTKIWRIRK*PNQADRRSAFIPND
Trigger: ATCATTTGGGATGAATGCGCTTCTCCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS-3UTR CAA 90 bp CATACCTGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAAGGTCAGGCCATCCTaGCTCTCACAGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: HTCWTGLQALGPILMKKIKVRPS*LSQWIL
Trigger: CAAGATCCACTGTGAGAGCAAGGATGGCCTGACCTT...GATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACAGGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395720.2
CDS-3UTR CAA 90 bp CAAGATCAGAACCTTGTCTGCTGCCTCGAAGCCTCTATTCACTCAGGGTTCAGGTTCCCCTCCTTGTCTTaGACATTGTGGTCACAGCCA +
Preference number: 5 (lower is better)
Translates to: QDQNLVCCLEASIHSGFRFPSLS*TLWSQP
Trigger: TGGCTGTGACCACAATGTCAAAGACAAGGAGGGGAA...CCTGAACCCTGAGTGAATAGAGGCTTCGAGGCAGCAGACAAGGTTCTGATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496660.5
ENST00000513267.2
CDS-3UTR CAA 90 bp TGCATGACTGTGCATTTCAGTAGAATCACCTGGAGGTCTGTTAACAGTGATTTTACCAGGCTGACATGGTaGCTGCGGACGGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: CMTVHFSRITWRSVNSDFTRLTW*LRTATA
Trigger: GGCAGTGGCCGTCCGCAGCAACCATGTCAGCCTGGT...AAAATCACTGTTAACAGACCTCCAGGTGATTCTACTGAAATGCACAGTCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CAA 90 bp TTTAAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTGGCTCCACACGCTGGGTGCCTGTCCACTGTaGCTCGATGGCGTCGACATG +
Preference number: 5 (lower is better)
Translates to: FKKPLNDGHLLFRWLHTLGACPL*LDGVDM
Trigger: CATGTCGACGCCATCGAGCAACAGTGGACAGGCACC...CAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CAA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTAAGGCACAAGAATCATTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: CWTGLQALGPILMKKISVRHKNH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAATGATTCTTGTGCCT...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR CAA 90 bp CATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGAGAGAGAGCCAAGATCGCACCATaGCACTTCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: HRGEFLLAELMSTTGRERAKIAP*HFSLGD
Trigger: GTCGCCCAGGCTGAAGTGCAATGGTGCGATCTTGGC...TCTCTCTCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483400.5
ENST00000496660.5
CDS-3UTR CAA 90 bp TTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTACATTGTACTCCAGCCTGTaGGACGGGATTACAGGCCCT +
Preference number: 5 (lower is better)
Translates to: LDGITGPWTHPHEKDQCTLYSSL*DGITGP
Trigger: AGGGCCTGTAATCCCGTCCAACAGGCTGGAGTACAA...TGTACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620154.4
CDS-3UTR CAA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTAAAGGTCAGGCCATCCTaGCTCTCACAGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: CWTGLQALGPILMKKISVKVRPS*LSQWIL
Trigger: CAAGATCCACTGTGAGAGCAAGGATGGCCTGACCTT...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CAA 90 bp ACTCTTCAGCACACACAGTTTCCCCGATTATTAACATCTGGCATCAGTGTGGTAACGTCACTGTCGGAGTaGATGAGGAGCCGGACCAAG +
Preference number: 5 (lower is better)
Translates to: TLQHTQFPRLLTSGISVVTSLSE*MRSRTK
Trigger: CTTGGTCCGGCTCCTCATCAACTCCGACAGTGACGT...TACCACACTGATGCCAGATGTTAATAATCGGGGAAACTGTGTGTGCTGAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTGGCGTCTGCTGCCTATaGTCCACGGCATTCACGTCA +
Preference number: 5 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLGVCCL*STAFTS
Trigger: TGACGTGAATGCCGTGGACAATAGGCAGCAGACGCC...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp AGAAAAATTGAGCAGATAGCACAGAGAGCTCCCACGTACTCTTCAGCACACACAAGGCACAAGAATCATTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: RKIEQIAQRAPTYSSAHTRHKNH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAATGATTCTTGTGCCT...TGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATCTGCTCAATTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp CCAGGTCATAGAGGAGAATTTTTACTGGCAGAACTGATGAGTACAACGGGGAGACTCTCACAGTGGATCTaGGCCCCTGAGTTTACCAAG +
Preference number: 5 (lower is better)
Translates to: PGHRGEFLLAELMSTTGRLSQWI*APEFTK
Trigger: CTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGAG...TCTCCCCGTTGTACTCATCAGTTCTGCCAGTAAAAATTCTCCTCTATGACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496660.5
CDS-3UTR CAA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACTCCTTGTCTTTGACATaGTGGTCACAGCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYSLSLT*WSQPEP
Trigger: GGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGA...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp TGTTGGACGGGATTACAGGCCCTTGGACCCATCCTCATGAAAAAGATCAGTGTAGCAGTGTTCCCCTCCTaGTCTTTGACATTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: CWTGLQALGPILMKKISVAVFPS*SLTLWS
Trigger: TGACCACAATGTCAAAGACAAGGAGGGGAACACTGC...TACACTGATCTTTTTCATGAGGATGGGTCCAAGGGCCTGTAATCCCGTCCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CAA 90 bp TGCATGACTGTGCATTTCAGTAGAATCACCTGGAGGTCTGTTAACAGTGATTTTGGTGCCTGTCCACTGTaGCTCGATGGCGTCGACATG +
Preference number: 5 (lower is better)
Translates to: CMTVHFSRITWRSVNSDFGACPL*LDGVDM
Trigger: CATGTCGACGCCATCGAGCAACAGTGGACAGGCACC...AAAATCACTGTTAACAGACCTCCAGGTGATTCTACTGAAATGCACAGTCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CAA 90 bp GGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACTTCCTCTCACTGCCCTaGCAGCTCCTGGAAATCACT +
Preference number: 5 (lower is better)
Translates to: GFDQCPMSCTHHHSVIQNFLSLP*QLLEIT
Trigger: AGTGATTTCCAGGAGCTGCAAGGGCAGTGAGAGGAA...GTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp CTATGGGTTTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACTTCCTCTCACTGCCCTaGCAGCTCCTGGAAATCACT +
Preference number: 5 (lower is better)
Translates to: LWVLTNAQCHVPTITVSYFLSLP*QLLEIT
Trigger: AGTGATTTCCAGGAGCTGCAAGGGCAGTGAGAGGAA...GTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAAACCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp TTTAAAAAGCCCTTAAATGATGGTCATCTTCTGTTCAGGTGGCTCCACACGCTGTCCTTGTCTTTGACATaGTGGTCACAGCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: FKKPLNDGHLLFRWLHTLSLSLT*WSQPEP
Trigger: GGGCTCTGGCTGTGACCACAATGTCAAAGACAAGGA...CAGCGTGTGGAGCCACCTGAACAGAAGATGACCATCATTTAAGGGCTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS-3UTR CAA 90 bp ACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTTCACACTGTCTTTGTAGTTTaGCCTGTTCCAGCATGTCAT +
Preference number: 5 (lower is better)
Translates to: TNAQCHVPTITVSYRTFHTVFVV*PVPACH
Trigger: ATGACATGCTGGAACAGGCAAAACTACAAAGACAGT...GTGAAAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp ATCACTGATCTTTTTACTGTCTTTGTAGTTTTGCCTGTTCCAGCATGTCATATCGCAGTGTTCCCCTCCTaGTCTTTGACATTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: ITDLFTVFVVLPVPACHIAVFPS*SLTLWS
Trigger: TGACCACAATGTCAAAGACAAGGAGGGGAACACTGC...GATATGACATGCTGGAACAGGCAAAACTACAAAGACAGTAAAAAGATCAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS-3UTR CAA 90 bp TTTGACCAATGCCCAATGTCATGTACCCACCATCACAGTGTCATACAGAACCTTATCAGTGTGGTACATTaGATACAACTGATGAACCAA +
Preference number: 5 (lower is better)
Translates to: FDQCPMSCTHHHSVIQNLISVVH*IQLMNQ
Trigger: TTGGTTCATCAGTTGTATCAAATGTACCACACTGAT...AAGGTTCTGTATGACACTGTGATGGTGGGTACATGACATTGGGCATTGGTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000620154.4
CDS GCA 72 bp CTGCCGACATTGTTCTGGCGGGCGGCCTCGTGGAGCTaGCTCTCCAGAGGAAGCAGGCCGTCGGTCTCCCAC +
Preference number: 6 (lower is better)
Translates to: LPTLFWRAASWS*LSRGSRPSVSH
Trigger: GTGGGAGACCGACGGCCTGCTTCCTCTGGAGAGGCAGCTCCACGAGGCCGCCCGCCAGAACAATGTCGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000513267.2
CDS CCA 72 bp TGCCAATGGCCACGAGGCCCTCGAACAGCGCTTTGCTaGGGTTCTCACCAGCCGTGGCCACGCCATGCAGCC +
Preference number: 6 (lower is better)
Translates to: CQWPRGPRTALC*GSHQPWPRHAA
Trigger: GGCTGCATGGCGTGGCCACGGCTGGTGAGAACCCCAGCAAAGCGCTGTTCGAGGGCCTCGTGGCCATTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS CAA 72 bp CTCCTGCCAATGGCCACGAGGCCCTCGAACAGCGCTTaGCTGGGGTTCTCACCAGCCGTGGCCACGCCATGC +
Preference number: 6 (lower is better)
Translates to: LLPMATRPSNSA*LGFSPAVATPC
Trigger: GCATGGCGTGGCCACGGCTGGTGAGAACCCCAGCAAAGCGCTGTTCGAGGGCCTCGTGGCCATTGGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS CAA 90 bp GCCAGGTCCCTCCTGCCAATGGCCACGAGGCCCTCGAACAGCGCTTaGCTGGGGTTCTCACCAGCCGTGGCCACGCCATGCAGCCAAATG +
Preference number: 6 (lower is better)
Translates to: ARSLLPMATRPSNSA*LGFSPAVATPCSQM
Trigger: CATTTGGCTGCATGGCGTGGCCACGGCTGGTGAGAACCCCAGCAAAGCGCTGTTCGAGGGCCTCGTGGCCATTGGCAGGAGGGACCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS GCA 72 bp TCCTGCCAATGGCCACGAGGCCCTCGAACAGCGCTTTaGTGGGGTTCTCACCAGCCGTGGCCACGCCATGCA +
Preference number: 6 (lower is better)
Translates to: SCQWPRGPRTAL*WGSHQPWPRHA
Trigger: TGCATGGCGTGGCCACGGCTGGTGAGAACCCCAGCAAAGCGCTGTTCGAGGGCCTCGTGGCCATTGGCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS GCA 72 bp GGCCAAGGCAAGGAGAGGACCAAGGGCACACAGACGTaGCTCTGTGAGGGCCCCTACCGCATCCTCCTCGTC +
Preference number: 6 (lower is better)
Translates to: GQGKERTKGTQT*LCEGPYRILLV
Trigger: GACGAGGAGGATGCGGTAGGGGCCCTCACAGAGGCACGTCTGTGTGCCCTTGGTCCTCTCCTTGCCTTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS TCA 72 bp GTTCAGGTGGCTCCACACGCTGAGGTCCCACGTGCCTaGAGGTCTGGCCCCTCCGGTTACATGGCTGTGCAC +
Preference number: 6 (lower is better)
Translates to: VQVAPHAEVPRA*RSGPSGYMAVH
Trigger: GTGCACAGCCATGTAACCGGAGGGGCCAGACCTTCAGGCACGTGGGACCTCAGCGTGTGGAGCCACCTGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395720.2
ENST00000620154.4
CDS GCA 72 bp CTGGCCCTGGTGTTAACCCTCCTCCCAATCAGCTCCTaGATCCTGCCGACATTGTTCTGGCGGGCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: LALVLTLLPISS*ILPTLFWRAAS
Trigger: CGAGGCCGCCCGCCAGAACAATGTCGGCAGGATGCAGGAGCTGATTGGGAGGAGGGTTAACACCAGGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319580.13
ENST00000491145.5
ENST00000513267.2
CDS GCA 72 bp GGCACCCTGATGATCAACCACGTTGGCGCAGCCTCCTaGGTGGATGAGGACCCGAGACACATCCTCCGAGCC +
Preference number: 6 (lower is better)
Translates to: GTLMINHVGAAS*VDEDPRHILRA
Trigger: GGCTCGGAGGATGTGTCTCGGGTCCTCATCCACGCAGGAGGCTGCGCCAACGTGGTTGATCATCAGGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000611260.1
ENST00000620154.4
CDS GCA 72 bp GCTTTGCTGGGGTTCTCACCAGCCGTGGCCACGCCATaGAGCCAAATGAGCAGCATTCGGTGGCCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: ALLGFSPAVATP*SQMSSIRWPCS
Trigger: GGAGCACGGCCACCGAATGCTGCTCATTTGGCTGCATGGCGTGGCCACGGCTGGTGAGAACCCCAGCAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS CCA 72 bp CTCCCAATCAGCTCCTGCATCCTGCCGACATTGTTCTaGCGGGCGGCCTCGTGGAGCTGCCTCTCCAGAGGA +
Preference number: 6 (lower is better)
Translates to: LPISSCILPTLF*RAASWSCLSRG
Trigger: TCCTCTGGAGAGGCAGCTCCACGAGGCCGCCCGCCAGAACAATGTCGGCAGGATGCAGGAGCTGATTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319580.13
ENST00000491145.5
ENST00000513267.2
CDS TCA 72 bp GGTTCTCACCAGCCGTGGCCACGCCATGCAGCCAAATaGGCAGCATTCGGTGGCCGTGCTCCTGATAGCTCC +
Preference number: 6 (lower is better)
Translates to: GSHQPWPRHAAK*AAFGGRAPDSS
Trigger: GGAGCTATCAGGAGCACGGCCACCGAATGCTGCTCATTTGGCTGCATGGCGTGGCCACGGCTGGTGAGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS CCA 72 bp ATGCCAGCTTCTTCCACTCACGGGGCTGCAGATACCTaGAGGCCAGCCGCCACAGCACAGAACGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: MPASSTHGAADT*RPAATAQNGAA
Trigger: AGCAGCTCCGTTCTGTGCTGTGGCGGCTGGCCTCCAGGTATCTGCAGCCCCGTGAGTGGAAGAAGCTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS CCA 72 bp TGCATCCTGCCGACATTGTTCTGGCGGGCGGCCTCGTaGAGCTGCCTCTCCAGAGGAAGCACTGTAGTCCCA +
Preference number: 6 (lower is better)
Translates to: CILPTLFWRAAS*SCLSRGSTVVP
Trigger: TGGGACTACAGTGCTTCCTCTGGAGAGGCAGCTCCACGAGGCCGCCCGCCAGAACAATGTCGGCAGGATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS CAA 72 bp TCGGAGTTGATGAGGAGCCGGACCAAGGCAGGGAAGTaGTGCCTCACAGCGAGGTGCAGAGGAGAGGCACCC +
Preference number: 6 (lower is better)
Translates to: SELMRSRTKAGK*CLTARCRGEAP
Trigger: GGGTGCCTCTCCTCTGCACCTCGCTGTGAGGCACAACTTCCCTGCCTTGGTCCGGCTCCTCATCAACTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000611260.1
ENST00000620154.4
CDS TCA 72 bp TCTGCTATGTCCTGCCAGGCGTGCTCTGCAGCCAGGTaGAGGGGCGTCTGCTGCCTATTGTCCACGGCATTC +
Preference number: 6 (lower is better)
Translates to: SAMSCQACSAAR*RGVCCLLSTAF
Trigger: GAATGCCGTGGACAATAGGCAGCAGACGCCCCTTCACCTGGCTGCAGAGCACGCCTGGCAGGACATAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000611260.1
ENST00000620154.4
CDS TCA 72 bp TGCAGCACAGCCATATGGCCCCGACCAGCAGCCAGATaGAGGGCAGTGTTCCCCTCCTTGCTCTCACAGTGG +
Preference number: 6 (lower is better)
Translates to: CSTAIWPRPAAR*RAVFPSLLSQW
Trigger: CCACTGTGAGAGCAAGGAGGGGAACACTGCCCTTCATCTGGCTGCTGGTCGGGGCCATATGGCTGTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496480.5
CDS CAA 90 bp GGCGTCTGCTGCCTATTGTCCACGGCATTCACGTCACTGTCGGAGTaGATGAGGAGCCGGACCAAGGCAGGGAAGTTGTGCCTCACAGCG +
Preference number: 6 (lower is better)
Translates to: GVCCLLSTAFTSLSE*MRSRTKAGKLCLTA
Trigger: CGCTGTGAGGCACAACTTCCCTGCCTTGGTCCGGCTCCTCATCAACTCCGACAGTGACGTGAATGCCGTGGACAATAGGCAGCAGACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000611260.1
ENST00000620154.4
CDS GCA 72 bp GCCAGCACAGGCACATGGCCTTTTTGGGCTGCGCAGTaGAGTAAGGTCAGGCCATCCTTGCTCTCACAGTGG +
Preference number: 6 (lower is better)
Translates to: ASTGTWPFWAAQ*SKVRPSLLSQW
Trigger: CCACTGTGAGAGCAAGGATGGCCTGACCTTACTGCACTGCGCAGCCCAAAAAGGCCATGTGCCTGTGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000491145.5
ENST00000496660.5
ENST00000620154.4
CDS GCA 72 bp GAGGAGCATATCTGCTATGTCCTGCCAGGCGTGCTCTaGAGCCAGGTGAAGGGGCGTCTGCTGCCTATTGTC +
Preference number: 6 (lower is better)
Translates to: EEHICYVLPGVL*SQVKGRLLPIV
Trigger: GACAATAGGCAGCAGACGCCCCTTCACCTGGCTGCAGAGCACGCCTGGCAGGACATAGCAGATATGCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000611260.1
ENST00000620154.4
CDS GCA 72 bp TACCTGGAGGCCAGCCGCCACAGCACAGAACGGAGCTaGTGTGTTTCCTGCCGATGGTCCTGCTTAAAGGAC +
Preference number: 6 (lower is better)
Translates to: YLEASRHSTERS*CVSCRWSCLKD
Trigger: GTCCTTTAAGCAGGACCATCGGCAGGAAACACAGCAGCTCCGTTCTGTGCTGTGGCGGCTGGCCTCCAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS GCA 72 bp TCCCAGGAATATGCCAGCTTCTTCCACTCACGGGGCTaGAGATACCTGGAGGCCAGCCGCCACAGCACAGAA +
Preference number: 6 (lower is better)
Translates to: SQEYASFFHSRG*RYLEASRHSTE
Trigger: TTCTGTGCTGTGGCGGCTGGCCTCCAGGTATCTGCAGCCCCGTGAGTGGAAGAAGCTGGCATATTCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS CCA 72 bp TTAGAAACAGGCGGGAATTTGGAGGCAGGAGGCGGGTaGTGCAGACAAGGACAGCACTGGAGAGAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: LETGGNLEAGGG*CRQGQHWREEG
Trigger: TCCCTCCTCTCTCCAGTGCTGTCCTTGTCTGCACCACCCGCCTCCTGCCTCCAAATTCCCGCCTGTTTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS TCA 72 bp CAAGAATCATTTGAACCCGGGAGGCGGAGGTTGCCGTaGGCTGAGATCTCGCCATTGTACTCCAGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: QESFEPGRRRLP*AEISPLYSSQP
Trigger: TGGCTGGCTGGAGTACAATGGCGAGATCTCAGCTCACGGCAACCTCCGCCTCCCGGGTTCAAATGATTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319580.13
ENST00000395723.5
CDS GCA 72 bp GGTGCCTGTCCACTGTTGCTCGATGGCGTCGACATGTaGCTCCGTGAACTCCCAGGAATATGCCAGCTTCTT +
Preference number: 6 (lower is better)
Translates to: GACPLLLDGVDM*LRELPGICQLL
Trigger: AAGAAGCTGGCATATTCCTGGGAGTTCACGGAGGCACATGTCGACGCCATCGAGCAACAGTGGACAGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000620154.4
CDS CCA 72 bp TCCAGGTCCTCCATTATGAACGCCAGCACAGGCACATaGCCTTTTTGGGCTGCGCAGTGCAGTAAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: SRSSIMNASTGT*PFWAAQCSKVR
Trigger: CCTGACCTTACTGCACTGCGCAGCCCAAAAAGGCCATGTGCCTGTGCTGGCGTTCATAATGGAGGACCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000491145.5
ENST00000496660.5
ENST00000620154.4
CDS CAA 72 bp TGCCTATTGTCCACGGCATTCACGTCACTGTCGGAGTaGATGAGGAGCCGGACCAAGGCAGGGAAGTTGTGC +
Preference number: 6 (lower is better)
Translates to: CLLSTAFTSLSE*MRSRTKAGKLC
Trigger: GCACAACTTCCCTGCCTTGGTCCGGCTCCTCATCAACTCCGACAGTGACGTGAATGCCGTGGACAATAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000611260.1
ENST00000620154.4
CDS CAA 72 bp TCAGCTTTTATGATCATGTCCACCAGGCTGACATGGTaGCTGCGGACGGCCACTGCCAGGGCGGTTTTTCCC +
Preference number: 6 (lower is better)
Translates to: SAFMIMSTRLTW*LRTATARAVFP
Trigger: GGGAAAAACCGCCCTGGCAGTGGCCGTCCGCAGCAACCATGTCAGCCTGGTGGACATGATCATAAAAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000620154.4
CDS CCA 72 bp TCCATTATGAACGCCAGCACAGGCACATGGCCTTTTTaGGCTGCGCAGTGCAGTAAGGTCAGGCCATCCTTG +
Preference number: 6 (lower is better)
Translates to: SIMNASTGTWPF*AAQCSKVRPSL
Trigger: CAAGGATGGCCTGACCTTACTGCACTGCGCAGCCCAAAAAGGCCATGTGCCTGTGCTGGCGTTCATAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000491145.5
ENST00000496660.5
ENST00000620154.4
CDS CCA 72 bp CGATCAGCTTTTATGATCATGTCCACCAGGCTGACATaGTTGCTGCGGACGGCCACTGCCAGGGCGGTTTTT +
Preference number: 6 (lower is better)
Translates to: RSAFMIMSTRLT*LLRTATARAVF
Trigger: AAAAACCGCCCTGGCAGTGGCCGTCCGCAGCAACCATGTCAGCCTGGTGGACATGATCATAAAAGCTGATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000620154.4
CDS CAA 72 bp GAGTTGCACTGCTTTGCTTTAGAAACAGGCGGGAATTaGGAGGCAGGAGGCGGGTGGTGCAGACAAGGACAG +
Preference number: 6 (lower is better)
Translates to: ELHCFALETGGN*EAGGGWCRQGQ
Trigger: CTGTCCTTGTCTGCACCACCCGCCTCCTGCCTCCAAATTCCCGCCTGTTTCTAAAGCAAAGCAGTGCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS TCA 72 bp GAACCAGGCAGACAGGAGAAGCGCATTCATCCCAAATaGTCAGCAGGCTCCCGAGCATCCAAAGAGAGTTGC +
Preference number: 6 (lower is better)
Translates to: EPGRQEKRIHPK*SAGSRASKESC
Trigger: GCAACTCTCTTTGGATGCTCGGGAGCCTGCTGATCATTTGGGATGAATGCGCTTCTCCTGTCTGCCTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS GCA 72 bp CAGGCTCCCGAGCATCCAAAGAGAGTTGCACTGCTTTaGTTTAGAAACAGGCGGGAATTTGGAGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: QAPEHPKRVALL*FRNRREFGGRR
Trigger: CCTCCTGCCTCCAAATTCCCGCCTGTTTCTAAAGCAAAGCAGTGCAACTCTCTTTGGATGCTCGGGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS CCA 72 bp GCCCCTGAGTTTACCAAGATCTGGAGGATTCGTAAGTaGCCGAACCAGGCAGACAGGAGAAGCGCATTCATC +
Preference number: 6 (lower is better)
Translates to: APEFTKIWRIRK*PNQADRRSAFI
Trigger: GATGAATGCGCTTCTCCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCAGATCTTGGTAAACTCAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319580.13
ENST00000491145.5
ENST00000496480.5
ENST00000496660.5
ENST00000513267.2
CDS CCA 72 bp TCACAGTGGATCTTGGCCCCTGAGTTTACCAAGATCTaGAGGATTCGTAAGTGGCCGAACCAGGCAGACAGG +
Preference number: 6 (lower is better)
Translates to: SQWILAPEFTKI*RIRKWPNQADR
Trigger: CCTGTCTGCCTGGTTCGGCCACTTACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCACTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000491145.5
ENST00000496480.5
ENST00000496660.5
ENST00000513267.2
ENST00000620154.4
CDS CCA 72 bp GGGCAGTGTTCCCCTCCTTGCTCTCACAGTGGATCTTaGCCCCTGAGTTTACCAAGATCTGGAGGATTCGTA +
Preference number: 6 (lower is better)
Translates to: GQCSPPCSHSGS*PLSLPRSGGFV
Trigger: TACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGAGCAAGGAGGGGAACACTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496480.5
CDS CCA 72 bp TCCAGGTCCTCCATTATGAACGCCAGCACAGGCACATaGCCTTTTTGGGCTTGCTCTCACAGTGGATCTTGG +
Preference number: 6 (lower is better)
Translates to: SRSSIMNASTGT*PFWACSHSGSW
Trigger: CCAAGATCCACTGTGAGAGCAAGCCCAAAAAGGCCATGTGCCTGTGCTGGCGTTCATAATGGAGGACCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS CAA 72 bp AGGGCAGTGTTCCCCTCCTTGCTCTCACAGTGGATCTaGGCCCCTGAGTTTACCAAGATCTGGAGGATTCGT +
Preference number: 6 (lower is better)
Translates to: RAVFPSLLSQWI*APEFTKIWRIR
Trigger: ACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGAGCAAGGAGGGGAACACTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496480.5
CDS CAA 90 bp ATCCAAAGAGAGTTGCACTGCTTTGCTTTAGAAACAGGCGGGAATTaGGAGGCAGGAGGCGGGTGGTGCAGACAAGGACAGCACTGGAGA +
Preference number: 6 (lower is better)
Translates to: IQRELHCFALETGGN*EAGGGWCRQGQHWR
Trigger: TCTCCAGTGCTGTCCTTGTCTGCACCACCCGCCTCCTGCCTCCAAATTCCCGCCTGTTTCTAAAGCAAAGCAGTGCAACTCTCTTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS TCA 72 bp CCTGCTTATCTCTCAGGTTTAAGTCAACCCCAGCAATaGGGAGCATATCTGCTATGTCCTGCCAGGCGTGCT +
Preference number: 6 (lower is better)
Translates to: PAYLSGLSQPQQ*GAYLLCPARRA
Trigger: AGCACGCCTGGCAGGACATAGCAGATATGCTCCTCATTGCTGGGGTTGACTTAAACCTGAGAGATAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000620154.4
CDS TCA 72 bp GGTCCTTATCTCTCAGGTTTAAGTCAACCCCAGCAATaGGGAGCATATCTGCTATGTCCTGCCAGGCGTGCT +
Preference number: 6 (lower is better)
Translates to: GPYLSGLSQPQQ*GAYLLCPARRA
Trigger: AGCACGCCTGGCAGGACATAGCAGATATGCTCCTCATTGCTGGGGTTGACTTAAACCTGAGAGATAAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395723.5
CDS CCA 72 bp GTAAGGTCAGGCCATCCTTGCTCTCACAGTGGATCTTaGCCCCTGAGTTTACCAAGATCTGGAGGATTCGTA +
Preference number: 6 (lower is better)
Translates to: VRSGHPCSHSGS*PLSLPRSGGFV
Trigger: TACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGAGCAAGGATGGCCTGACCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000491145.5
ENST00000496660.5
ENST00000620154.4
CDS CAA 72 bp AGTAAGGTCAGGCCATCCTTGCTCTCACAGTGGATCTaGGCCCCTGAGTTTACCAAGATCTGGAGGATTCGT +
Preference number: 6 (lower is better)
Translates to: SKVRPSLLSQWI*APEFTKIWRIR
Trigger: ACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGAGCAAGGATGGCCTGACCTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319580.13
ENST00000395720.2
ENST00000395723.5
ENST00000491145.5
ENST00000496660.5
ENST00000620154.4
CDS CAA 72 bp CACATGGCCTTTTTGGGCTTGCTCTCACAGTGGATCTaGGCCCCTGAGTTTACCAAGATCTGGAGGATTCGT +
Preference number: 6 (lower is better)
Translates to: HMAFLGLLSQWI*APEFTKIWRIR
Trigger: ACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGAGCAAGCCCAAAAAGGCCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS CAA 90 bp CATTCATCCCAAATGATCAGCAGGCTCCCGAGCATCCAAAGAGAGTaGCACTGCTTTGCTTTAGAAACAGGCGGGAATTTGGAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: HSSQMISRLPSIQRE*HCFALETGGNLEAG
Trigger: TCCTGCCTCCAAATTCCCGCCTGTTTCTAAAGCAAAGCAGTGCAACTCTCTTTGGATGCTCGGGAGCCTGCTGATCATTTGGGATGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491145.5
CDS TCA 72 bp GTACCTTATCTCTCAGGTTTAAGTCAACCCCAGCAATaGGGAGCATATCTGCTATGTCCTGCCAGGCGTGCT +
Preference number: 6 (lower is better)
Translates to: VPYLSGLSQPQQ*GAYLLCPARRA
Trigger: AGCACGCCTGGCAGGACATAGCAGATATGCTCCTCATTGCTGGGGTTGACTTAAACCTGAGAGATAAGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611260.1
CDS CCA 72 bp ACATGGCCTTTTTGGGCTTGCTCTCACAGTGGATCTTaGCCCCTGAGTTTACCAAGATCTGGAGGATTCGTA +
Preference number: 6 (lower is better)
Translates to: TWPFWACSHSGS*PLSLPRSGGFV
Trigger: TACGAATCCTCCAGATCTTGGTAAACTCAGGGGCCAAGATCCACTGTGAGAGCAAGCCCAAAAAGGCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513267.2
CDS CAA 72 bp CAAATGATCAGCAGGCTCCCGAGCATCCAAAGAGAGTaGCACTGCTTTGCTTTAGAAACAGGCGGGAATTTG +
Preference number: 6 (lower is better)
Translates to: QMISRLPSIQRE*HCFALETGGNL
Trigger: CAAATTCCCGCCTGTTTCTAAAGCAAAGCAGTGCAACTCTCTTTGGATGCTCGGGAGCCTGCTGATCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491145.5