RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000151150

Ensembl transcript IDs: ENST00000280772.7, ENST00000355288.6, ENST00000373815.5, ENST00000373820.5, ENST00000373827.6, ENST00000459732.2, ENST00000460468.5, ENST00000465749.2, ENST00000469721.3, ENST00000474360.1, ENST00000486349.2, ENST00000489505.2, ENST00000502769.5, ENST00000503366.5, ENST00000503925.1, ENST00000506635.5, ENST00000508449.1, ENST00000510382.1, ENST00000511043.5, ENST00000513049.5, ENST00000514197.5, ENST00000610321.4, ENST00000610901.4, ENST00000612776.4, ENST00000613207.4, ENST00000616444.4, ENST00000617800.4, ENST00000618080.4, ENST00000621739.1, ENST00000622427.4

Found 1899 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTACCGAGGAGCAGCGACACCATGTCCACGTGCCCTTCCTGAGCTaGGAGATGGACGGAAGCAATTCCTTGCCGGGTAACTGCGTTGGC +
Preference number: 1 (lower is better)
Translates to: STEEQRHHVHVPFLS*EMDGSNSLPGNCVG
Trigger: GCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTCGGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 90 bp GAACGCGGCCACATCCTCATGCCCCTCTCGGGCGGAAAGGTGAAGTaGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGATGCCCCTTG +
Preference number: 1 (lower is better)
Translates to: ERGHILMPLSGGKVK*GVPRSCGCIWRCPL
Trigger: CAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTTTCCGCCCGAGAGGGGCATGAGGATGTGGCCGCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 90 bp GCATTTCTACCGAGGAGCAGCGACACCATGTCCACGTGCCCTTCCTaGGCTGCGAGATGGACGGAAGCAATTCCTTGCCGGGTAACTGCG +
Preference number: 1 (lower is better)
Translates to: AFLPRSSDTMSTCPS*AARWTEAIPCRVTA
Trigger: CGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTCGGTAGAAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 90 bp GGGACTGGCAGAACGCGCTCCGAGACTAAAGCCCATGTAACCCTCTaGAGGCAGGGAATCATCACCCAATTCCTTAAGGTCCTGTGGCCC +
Preference number: 1 (lower is better)
Translates to: GTGRTRSETKAHVTL*RQGIITQFLKVLWP
Trigger: GGGCCACAGGACCTTAAGGAATTGGGTGATGATTCCCTGCCTGCAGAGGGTTACATGGGCTTTAGTCTCGGAGCGCGTTCTGCCAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 90 bp GTCTTGTACCAGATACCGCACAACTTCAGCTTGGCCGGAGCGAGCTaGCATGTGCAGTGCTGTTTCTCCTCTCTGGGGAACATGAGCCAA +
Preference number: 1 (lower is better)
Translates to: VLYQIPHNFSLAGAS*HVQCCFSSLGNMSQ
Trigger: TTGGCTCATGTTCCCCAGAGAGGAGAAACAGCACTGCACATGGCAGCTCGCTCCGGCCAAGCTGAAGTTGTGCGGTATCTGGTACAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 90 bp GCCCCTTGGTTTACGAGGACTTCTGCCACATTCACTCGATCTTCTTaGGCAGCCAAATGGAGTGGGGTCAGGCCGCTCTTATTGCTCAGG +
Preference number: 1 (lower is better)
Translates to: APWFTRTSATFTRSS*AAKWSGVRPLLLLR
Trigger: CCTGAGCAATAAGAGCGGCCTGACCCCACTCCATTTGGCTGCTCAAGAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAACCAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 90 bp CTCTCGGGCGGAAAGGTGAAGTGGGGTGTACCCAGAAGTTGTGGCTaGATTTGGAGATGCCCCTTGCTGCAACAGCTGTTGTACTATGTC +
Preference number: 1 (lower is better)
Translates to: LSGGKVKWGVPRSCG*IWRCPLLQQLLYYV
Trigger: GACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTTTCCGCCCGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 90 bp CGAAGGCTGGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTTaGGGTACTTTCTTCCTCATCGGACAACTCGGACTGCATCTTTTT +
Preference number: 1 (lower is better)
Translates to: RRLATPGSLGQRRVS*GTFFLIGQLGLHLF
Trigger: AAAAAGATGCAGTCCGAGTTGTCCGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCAGCCTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR GCA 90 bp TTCCTGAGCTGCGAGATGGACGGAAGCAATTCCTTGCCGGGTAACTaGGTTGGCATCAGCACCATATTCCAGCAGAGTTGTCGCTATGTC +
Preference number: 1 (lower is better)
Translates to: FLSCEMDGSNSLPGN*VGISTIFQQSCRYV
Trigger: GACATAGCGACAACTCTGCTGGAATATGGTGCTGATGCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 90 bp CTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTaGCACATTCACTCGATCTTCTTGAGCAGCCAAATGGAGTGGGGT +
Preference number: 1 (lower is better)
Translates to: LCLGVHMSPLVYEDF*HIHSIFLSSQMEWG
Trigger: ACCCCACTCCATTTGGCTGCTCAAGAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 90 bp AAGGTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGATaGCCCTTGCTGCAACAGCTGTTGTACTATGTCTGCTTTCCCCAG +
Preference number: 1 (lower is better)
Translates to: KVKWGVPRSCGCIWR*PLLQQLLYYVCFPQ
Trigger: CTGGGGAAAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 90 bp GGCGGAAAGGTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTaGAGATGCCCCTTGCTGCAACAGCTGTTGTACTATGTCTGCTTT +
Preference number: 1 (lower is better)
Translates to: GGKVKWGVPRSCGCI*RCPLLQQLLYYVCF
Trigger: AAAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTTTCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 90 bp ACCCTCTGCAGGCAGGGAATCATCACCCAATTCCTTAAGGTCCTGTaGCCCAAGATATTTGTCTGTGTCCCCGGTCATTGCATCTTCACC +
Preference number: 1 (lower is better)
Translates to: TLCRQGIITQFLKVL*PKIFVCVPGHCIFT
Trigger: GGTGAAGATGCAATGACCGGGGACACAGACAAATATCTTGGGCCACAGGACCTTAAGGAATTGGGTGATGATTCCCTGCCTGCAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 90 bp GCCTCTGTTTTCTTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTaGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTA +
Preference number: 1 (lower is better)
Translates to: ASVFLSLADFVVTEG*PPREVSDNDVFLEV
Trigger: TACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAAGAAAACAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR GCA 90 bp CCTTGCCAGTTCTGTCCAACTAAGTCCCAGGTGATCGGCTACTATTaGCATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCT +
Preference number: 1 (lower is better)
Translates to: PCQFCPTKSQVIGYY*HPDICPFTWTLWTA
Trigger: AGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTAGCCGATCACCTGGGACTTAGTTGGACAGAACTGGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR TCA 90 bp AGAGGAGTAAATCCTTTCTTTGTTGTTATAGATAAAGACGCTCCATaGTCCAAAAGGAACGCGGCCACATCCTCATGCCCCTCTCGGGCG +
Preference number: 1 (lower is better)
Translates to: RGVNPFFVVIDKDAP*SKRNAATSSCPSRA
Trigger: CGCCCGAGAGGGGCATGAGGATGTGGCCGCGTTCCTTTTGGATCATGGAGCGTCTTTATCTATAACAACAAAGAAAGGATTTACTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 90 bp TTGCTGCAACAGCTGTTGTACTATGTCTGCTTTCCCCAGTCGGGCTaGAATGTGGAGTGGTGTTTGGTCATCCTTAGCTTTAGCTTCTAC +
Preference number: 1 (lower is better)
Translates to: LLQQLLYYVCFPQSG*NVEWCLVILSFSFY
Trigger: GTAGAAGCTAAAGCTAAGGATGACCAAACACCACTCCACATTTCAGCCCGACTGGGGAAAGCAGACATAGTACAACAGCTGTTGCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 90 bp TCTTCCCAGCAGCATCTGGAGATGCACTTTTCTGTAGCAGGAGATTaGCGACTTCAAGCTTTCCATATTTTGCTGCCACATGAAGAGGAG +
Preference number: 1 (lower is better)
Translates to: SSQQHLEMHFSVAGD*RLQAFHILLPHEEE
Trigger: CTCCTCTTCATGTGGCAGCAAAATATGGAAAGCTTGAAGTCGCCAATCTCCTGCTACAGAAAAGTGCATCTCCAGATGCTGCTGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 90 bp GTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGGTaGAGTCACTTGAGACCCCTATTTGTTAAATGCATTTGCAATATT +
Preference number: 1 (lower is better)
Translates to: VKSHPHPESLPPLLG*SHLRPLFVKCICNI
Trigger: AATATTGCAAATGCATTTAACAAATAGGGGTCTCAAGTGACTTCACCCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
3UTR TCA 90 bp GCAGTATTCCCATTCACAGTGAGTTCATTGGGGGAGGCGTTGTTCTaGAGTAAGACATTTATTATATGCGTATGCCCCTGCTGTGCTGCT +
Preference number: 1 (lower is better)
Translates to: AVFPFTVSSLGEALF*SKTFIICVCPCCAA
Trigger: AGCAGCACAGCAGGGGCATACGCATATAATAAATGTCTTACTTCAGAACAACGCCTCCCCCAATGAACTCACTGTGAATGGGAATACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 90 bp CTCTTTGGATGGCACAAGGAGTTCTTCAATCATCATGCTGTCCCGTaGATAGGAGCTTCTGTTCAAGGTGTAAGACCTATCCGAACTTAT +
Preference number: 1 (lower is better)
Translates to: LFGWHKEFFNHHAVP*IGASVQGVRPIRTY
Trigger: ATAAGTTCGGATAGGTCTTACACCTTGAACAGAAGCTCCTATGCACGGGACAGCATGATGATTGAAGAACTCCTTGTGCCATCCAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 90 bp TTAGATGCTGCTCTTTGGATGGCACAAGGAGTTCTTCAATCATCATaGTGTCCCGTGCATAGGAGCTTCTGTTCAAGGTGTAAGACCTAT +
Preference number: 1 (lower is better)
Translates to: LDAALWMAQGVLQSS*CPVHRSFCSRCKTY
Trigger: ATAGGTCTTACACCTTGAACAGAAGCTCCTATGCACGGGACAGCATGATGATTGAAGAACTCCTTGTGCCATCCAAAGAGCAGCATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 90 bp CCCTGTCATACAGCCAAACGTGAGCTGATGCTGACAATAGTTTATTaGCCATGGAGAAAATCCTCAGTCTTGATGGAACTCCAGGATGAT +
Preference number: 1 (lower is better)
Translates to: PCHTAKRELMLTIVY*PWRKSSVLMELQDD
Trigger: ATCATCCTGGAGTTCCATCAAGACTGAGGATTTTCTCCATGGCCAATAAACTATTGTCAGCATCAGCTCACGTTTGGCTGTATGACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR GCA 90 bp TCTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTaGAGGGCACATATGAATGTTAGAGATTATCTCTTCAGTGACCAC +
Preference number: 1 (lower is better)
Translates to: SWLPHEMHRIYKLGA*RAHMNVRDYLFSDH
Trigger: GTGGTCACTGAAGAGATAATCTCTAACATTCATATGTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR GCA 90 bp TGGAACTCCAGGATGATACCAAATGAACAGCGAGGAACATCAGGATaGCAAAAAGTCCTTATTTACAGAGGAAAGGAGGCTAGCTGCTTA +
Preference number: 1 (lower is better)
Translates to: WNSRMIPNEQRGTSG*QKVLIYRGKEASCL
Trigger: TAAGCAGCTAGCCTCCTTTCCTCTGTAAATAAGGACTTTTTGGCATCCTGATGTTCCTCGCTGTTCATTTGGTATCATCCTGGAGTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CCA 90 bp CATACAGCCAAACGTGAGCTGATGCTGACAATAGTTTATTGGCCATaGAGAAAATCCTCAGTCTTGATGGAACTCCAGGATGATACCAAA +
Preference number: 1 (lower is better)
Translates to: HTAKRELMLTIVYWP*RKSSVLMELQDDTK
Trigger: TTTGGTATCATCCTGGAGTTCCATCAAGACTGAGGATTTTCTCCATGGCCAATAAACTATTGTCAGCATCAGCTCACGTTTGGCTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR TCA 90 bp TGGAGAAAATCCTCAGTCTTGATGGAACTCCAGGATGATACCAAATaGACAGCGAGGAACATCAGGATGCCAAAAAGTCCTTATTTACAG +
Preference number: 1 (lower is better)
Translates to: WRKSSVLMELQDDTK*TARNIRMPKSPYLQ
Trigger: CTGTAAATAAGGACTTTTTGGCATCCTGATGTTCCTCGCTGTTCATTTGGTATCATCCTGGAGTTCCATCAAGACTGAGGATTTTCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR GCA 90 bp CTAGCCCCATTCTTTATGCAAAGTAGATTATCCGTGCATTTCTTCTaGATTGATAGTGAATCCTTACTGGGGACAACTCACTCCATTTGG +
Preference number: 1 (lower is better)
Translates to: LAPFFMQSRLSVHFF*IDSESLLGTTHSIW
Trigger: CCAAATGGAGTGAGTTGTCCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTGCATAAAGAATGGGGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR TCA 90 bp ATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACATATaGATGTTAGAGATTATCTCTTCAGTGACCACAGAGGCACAAAGA +
Preference number: 1 (lower is better)
Translates to: MKCTEFISWELAGHI*MLEIISSVTTEAQR
Trigger: TCTTTGTGCCTCTGTGGTCACTGAAGAGATAATCTCTAACATTCATATGTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CCA 90 bp AGGAAGATTCTACGGGATCATTCATTTTGGCAAAAACAACAAACTTaGCCATATATGGAACACATATCAATTCTCTGTACAGTTGCGTGG +
Preference number: 1 (lower is better)
Translates to: RKILRDHSFWQKQQT*PYMEHISILCTVAW
Trigger: CCACGCAACTGTACAGAGAATTGATATGTGTTCCATATATGGCCAAGTTTGTTGTTTTTGCCAAAATGAATGATCCCGTAGAATCTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 90 bp TTCTGCATTGATAGTGAATCCTTACTGGGGACAACTCACTCCATTTaGCAACAATCTTTAATGGACAGGCAATATATAACATTGCTGAAA +
Preference number: 1 (lower is better)
Translates to: FCIDSESLLGTTHSI*QQSLMDRQYITLLK
Trigger: TTTCAGCAATGTTATATATTGCCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTCACTATCAATGCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CCA 90 bp GCAAATCAAGAATACCAAGACTCACTCAGATATGAAGTTAGTTTTTaGATCACTGGCTTCTTCAGAGAGACTCAGAAGATGCCTTATTAT +
Preference number: 1 (lower is better)
Translates to: ANQEYQDSLRYEVSF*ITGFFRETQKMPYY
Trigger: ATAATAAGGCATCTTCTGAGTCTCTCTGAAGAAGCCAGTGATCCAAAAACTAACTTCATATCTGAGTGAGTCTTGGTATTCTTGATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CCA 90 bp CATCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTaGTGCCTGAAATATTTCCATAATCAAATATTGGTCCTTCTAGCA +
Preference number: 1 (lower is better)
Translates to: HQQGHGKHCSHLQNF*CLKYFHNQILVLLA
Trigger: TGCTAGAAGGACCAATATTTGATTATGGAAATATTTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR TCA 90 bp TCTCAATCTTGTAAATGTTTACTTCTGGACAATTTGATCAATTCATaGAACAGAAGCAGTGTGATATGCCTGGGAAATTACACACCTTGT +
Preference number: 1 (lower is better)
Translates to: SQSCKCLLLDNLINS*NRSSVICLGNYTPC
Trigger: ACAAGGTGTGTAATTTCCCAGGCATATCACACTGCTTCTGTTTCATGAATTGATCAAATTGTCCAGAAGTAAACATTTACAAGATTGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR-3UTR TCA 90 bp GGTGTAGTGTCCCCTTTGTATCCATTGGATACACCTTCTCCTGAGGGCGGGGGCTTCTTTGCGGCTGCGTaGGGTGAGGCTCCTTGGTCC +
Preference number: 2 (lower is better)
Translates to: GVVSPLYPLDTPSPEGGGFFAAA*GEAPWS
Trigger: GGACCAAGGAGCCTCACCTCACGCAGCCGCAAAGAA...GCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp CATGATCCAAAAGGAACGCGGCCACATCCTCATGCCCCTCTCGGGCGGAAAGGTTTGGCCGGAGCGAGCTaGCATGTGCAGTGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: HDPKGTRPHPHAPLGRKGLAGAS*HVQCCF
Trigger: GAAACAGCACTGCACATGGCAGCTCGCTCCGGCCAA...ACCTTTCCGCCCGAGAGGGGCATGAGGATGTGGCCGCGTTCCTTTTGGATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 90 bp GTCCACGTGCCCTTCCTGAGCTGCGAGATGGACGGAAGCAATTCCTaGCCGGGTAACTGCGTTGGCATCAGCACCATATTCCAGCAGAGT +
Preference number: 2 (lower is better)
Translates to: VHVPFLSCEMDGSNS*PGNCVGISTIFQQS
Trigger: ACTCTGCTGGAATATGGTGCTGATGCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAAGGGCACGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp ATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTGCGCACAACTTCAGCTTaGCCGGAGCGAGCTGCCATG +
Preference number: 2 (lower is better)
Translates to: IPSLSGRPHEPLGLRGLLRTTSA*PERAAM
Trigger: CATGGCAGCTCGCTCCGGCCAAGCTGAAGTTGTGCG...CAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 90 bp CCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTaGTATCCATTGGATACACCTTCTCCTGAGGGCGGGGGCACCGGA +
Preference number: 2 (lower is better)
Translates to: PVMLQRRRRLGVVSP*YPLDTPSPEGGGTG
Trigger: TCCGGTGCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 90 bp CCGAAGGCTGGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTaGAGGTACTTTCTTCCTCATCGGACAACTCGGACTGCATCTTTT +
Preference number: 2 (lower is better)
Translates to: PKAGHPGKSRTTTCF*RYFLPHRTTRTASF
Trigger: AAAAGATGCAGTCCGAGTTGTCCGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCAGCCTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR-3UTR GCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGGGCTGCATTTGGAGATaGCCCTTGCTGCAACAGCTG +
Preference number: 2 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLGCIWR*PLLQQL
Trigger: CAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCC...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp TTCCTGAGCTGCGAGATGGACGGAAGCAATTCCTTGCCGGGTAACTGCGTTGGCAGTTGTGGCTGCATTTaGAGATGCCCCTTGCTGCAA +
Preference number: 2 (lower is better)
Translates to: FLSCEMDGSNSLPGNCVGSCGCI*RCPLLQ
Trigger: TTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACT...GCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp TCTTTGCGGCTGCGTGAGGTGAGGCTCCTTGGTCCAAAAGCAGAAGGGCCACTTTGTACCCAGAAGTTGTaGCTGCATTTGGAGATGCCC +
Preference number: 2 (lower is better)
Translates to: SLRLREVRLLGPKAEGPLCTQKL*LHLEMP
Trigger: GGGCATCTCCAAATGCAGCCACAACTTCTGGGTACA...AAGTGGCCCTTCTGCTTTTGGACCAAGGAGCCTCACCTCACGCAGCCGCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 90 bp CCCACACCTGGCTGGAGAGGGCAGGGACAACTTGGCTCTAGCAGGTaGTTACCTTCTGGGAATGAGGTCCATTGTTGCCAAATCTTGCTT +
Preference number: 2 (lower is better)
Translates to: PTPGWRGQGQLGSSR*LPSGNEVHCCQILL
Trigger: AAGCAAGATTTGGCAACAATGGACCTCATTCCCAGAAGGTAACAACCTGCTAGAGCCAAGTTGTCCCTGCCCTCTCCAGCCAGGTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CAA 90 bp GGGCGGAAAGGTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTaGGAGATGCCCCTTGCTGCAACAGCTGTTGTACTATGTCTGCTT +
Preference number: 2 (lower is better)
Translates to: GRKGEVGCTQKLWLH*EMPLAATAVVLCLL
Trigger: AAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTTTCCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 90 bp AGCCCCTTGGTTTACGAGGACTTCTGCCACATTCACTCGATCTTCTaGAGCAGCCAAATGGAGTGGGGTCAGGCCGCTCTTATTGCTCAG +
Preference number: 2 (lower is better)
Translates to: SPLVYEDFCHIHSIF*SSQMEWGQAALIAQ
Trigger: CTGAGCAATAAGAGCGGCCTGACCCCACTCCATTTGGCTGCTCAAGAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAACCAAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 90 bp CTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGTATCCATaGGATACACCTTCTCCTGAGGGCGGGGGCACCGGAATGGTCATT +
Preference number: 2 (lower is better)
Translates to: LQRRRRLGVVSPLYP*DTPSPEGGGTGMVI
Trigger: AATGACCATTCCGGTGCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR TCA 90 bp GTGTGTATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGAGATAAAGACGCTCCATaGTCCAAAAGGAACGCGGCC +
Preference number: 2 (lower is better)
Translates to: VCIPSLSGRPHEPLGLRGDKDAP*SKRNAA
Trigger: GGCCGCGTTCCTTTTGGATCATGGAGCGTCTTTATC...TCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGATACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp GTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGATGCCCCTTGCTGAGTCGGGCTGAAATGTaGAGTGGTGTTTGGTCATCC +
Preference number: 2 (lower is better)
Translates to: VKWGVPRSCGCIWRCPLLSRAEM*SGVWSS
Trigger: GGATGACCAAACACCACTCCACATTTCAGCCCGACT...CAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp CCTATCCGAACTTATCTTGGGACTGGCAGAACGCGCTCCGAGACTAAAGCCCATAGCAGCCAAATGGAGTaGGGTCAGGCCGCTCTTATT +
Preference number: 2 (lower is better)
Translates to: PIRTYLGTGRTRSETKAHSSQME*GQAALI
Trigger: AATAAGAGCGGCCTGACCCCACTCCATTTGGCTGCT...ATGGGCTTTAGTCTCGGAGCGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 90 bp CAGTGGTGTGTATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTaGGTTTACGAGGACTTCTGCCACATTCACTCGATCTTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: QWCVSHLCLGVHMSP*VYEDFCHIHSIFLS
Trigger: GCTCAAGAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGATACACACCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR TCA 90 bp GTGTGTATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGAGCTTTAGCTTCTACCTaGGCTCCGTCTTGTACCAGA +
Preference number: 2 (lower is better)
Translates to: VCIPSLSGRPHEPLGLRGALAST*APSCTR
Trigger: TCTGGTACAAGACGGAGCTCAGGTAGAAGCTAAAGC...TCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGATACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR TCA 90 bp AGCTTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACGTCTGGGCGTCCACATaGGCCCCTTGGTTTACGAGG +
Preference number: 2 (lower is better)
Translates to: SFCSRCKTYPNLSWDWQNVWAST*APWFTR
Trigger: CCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGAC...GTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR TCA 90 bp GGTGTAGTGTCCCCTTTGTATCCATTGGATACACCTTCTCCTGAGGGCGGGGGCGAGGGATTTCCACTATaGCAGGGCCTAAAAATTGTG +
Preference number: 2 (lower is better)
Translates to: GVVSPLYPLDTPSPEGGGEGFPL*QGLKIV
Trigger: CACAATTTTTAGGCCCTGTCATAGTGGAAATCCCTC...GCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp CCTATCCGAACTTATCTTGGGACTGGCAGAACGCGCTCCGAGACTAAAGCCCATGGAGATGCCCCTTGCTaGAACAGCTGTTGTACTATG +
Preference number: 2 (lower is better)
Translates to: PIRTYLGTGRTRSETKAHGDAPC*NSCCTM
Trigger: CATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCC...ATGGGCTTTAGTCTCGGAGCGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR TCA 90 bp AAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTCAGGACTATTCCCATTCACAGTaGGTTCATTGGGGGAGGCGT +
Preference number: 2 (lower is better)
Translates to: KMLEQGALWCCSEFHLQDYSHSQ*VHWGRR
Trigger: ACGCCTCCCCCAATGAACTCACTGTGAATGGGAATA...GTCCTGAAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp CCTATCCGAACTTATCTTGGGACTGGCAGAACGCGCTCCGAGACTAAAGCCCATTTTGGAGATGCCCCTTaGTGCAACAGCTGTTGTACT +
Preference number: 2 (lower is better)
Translates to: PIRTYLGTGRTRSETKAHFGDAP*CNSCCT
Trigger: AGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAA...ATGGGCTTTAGTCTCGGAGCGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp GGTGTAGTGTCCCCTTTGTATCCATTGGATACACCTTCTCCTGAGGGCGGGGGCATGTGGAGTGGTGTTTaGTCATCCTTAGCTTTAGCT +
Preference number: 2 (lower is better)
Translates to: GVVSPLYPLDTPSPEGGGMWSGV*SSLALA
Trigger: AGCTAAAGCTAAGGATGACCAAACACCACTCCACAT...GCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGGTCGCTATGTCCATCTaGTTCTTTTTGGCAGCGATG +
Preference number: 2 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLVAMSI*FFLAAM
Trigger: CATCGCTGCCAAAAAGAACCAGATGGACATAGCGAC...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp GGTGTAGTGTCCCCTTTGTATCCATTGGATACACCTTCTCCTGAGGGCGGGGGCTTAGATGCTGCTCTTTaGATGGCACAAGGAGTTCTT +
Preference number: 2 (lower is better)
Translates to: GVVSPLYPLDTPSPEGGGLDAAL*MAQGVL
Trigger: AAGAACTCCTTGTGCCATCCAAAGAGCAGCATCTAA...GCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR TCA 90 bp GGTGTAGTGTCCCCTTTGTATCCATTGGATACACCTTCTCCTGAGGGCGGGGGCGGGGAGGCGTTGTTCTaGAGTAAGACATTTATTATA +
Preference number: 2 (lower is better)
Translates to: GVVSPLYPLDTPSPEGGGGEALF*SKTFII
Trigger: TATAATAAATGTCTTACTTCAGAACAACGCCTCCCC...GCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp TTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACGCGACGGAAGCAATTCCTTaGCGGGTAACTGCGTTGGCA +
Preference number: 2 (lower is better)
Translates to: FCSRCKTYPNLSWDWQNATEAIP*RVTALA
Trigger: TGCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGT...CGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp AGGCGCCGGGCAATGCCAAGGGCAGTATTCCCATTCACAGTGAGTTCATTGGGGTTTGGCATTAACTTTTaGAGAATGCTGGAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: RRRAMPRAVFPFTVSSLGFGINF*RMLEQE
Trigger: TTCCTGCTCCAGCATTCTGCAAAAGTTAATGCCAAA...CCCCAATGAACTCACTGTGAATGGGAATACTGCCCTTGGCATTGCCCGGCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGGTGAATGTTAGATGCTaGTCTTTGGATGGCACAAGG +
Preference number: 2 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLVNVRC*SLDGTR
Trigger: CCTTGTGCCATCCAAAGAGCAGCATCTAACATTCAC...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp GTGTGTATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGATCTGTAGCAGGAGATTaGCGACTTCAAGCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: VCIPSLSGRPHEPLGLRGSVAGD*RLQAFH
Trigger: ATGGAAAGCTTGAAGTCGCCAATCTCCTGCTACAGA...TCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGATACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp AAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTCAGGACGGCCGTACACTTGCGTaGAGGAATGATGATTCTCAT +
Preference number: 2 (lower is better)
Translates to: KMLEQGALWCCSEFHLQDGRTLA*RNDDSH
Trigger: ATGAGAATCATCATTCCTCCACGCAAGTGTACGGCC...GTCCTGAAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp CAGGAGATTGGCGACTTCAAGCTTTCCATATTTTGCTGCCACATGAAGAGGAGTCCCAGAAGTTGTGGCTaGATTTGGAGATGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: QEIGDFKLSIFCCHMKRSPRSCG*IWRCPL
Trigger: CAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGG...ACTCCTCTTCATGTGGCAGCAAAATATGGAAAGCTTGAAGTCGCCAATCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp AAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTCAGGACAATCCGGGAAACCACTaGAAAATACTGGGGGAAATC +
Preference number: 2 (lower is better)
Translates to: KMLEQGALWCCSEFHLQDNPGNH*KILGEI
Trigger: GATTTCCCCCAGTATTTTGCAGTGGTTTCCCGGATT...GTCCTGAAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp TTCTGTCCAACTAAGTCCCAGGTGATCGGCTACTATTGCCATCCTGATATCTGTATGGACTCTGTGGACTaGTCCTTTTCTCACTGCCGG +
Preference number: 2 (lower is better)
Translates to: FCPTKSQVIGYYCHPDICMDSVD*SFSHCR
Trigger: CCGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCCAT...ACAGATATCAGGATGGCAATAGTAGCCGATCACCTGGGACTTAGTTGGACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR-3UTR CCA 90 bp AAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGCAGTGTTGTAGACCCCACACCTaGCTGGAGAGGGCAGGGACA +
Preference number: 2 (lower is better)
Translates to: KVKTAMVSASVEFRFTQCCRPHT*LERAGT
Trigger: TGTCCCTGCCCTCTCCAGCCAGGTGTGGGGTCTACA...ACACTGCGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR-3UTR CCA 90 bp TTAAGGTCCTGTGGCCCAAGATATTTGTCTGTGTCCCCGGTCATTGCATCTTCAGCAGCCCACATGCAGTaGTGTGTATCCCATCTTTGT +
Preference number: 2 (lower is better)
Translates to: LRSCGPRYLSVSPVIASSAAHMQ*CVSHLC
Trigger: ACAAAGATGGGATACACACCACTGCATGTGGGCTGC...TGAAGATGCAATGACCGGGGACACAGACAAATATCTTGGGCCACAGGACCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 90 bp AGGGAATCATCACCCAATTCCTTAAGGTCCTGTGGCCCAAGATATTaGTCTGTGTCCCCGGTCATTGCATCTTCACCTTCATCATCAGAC +
Preference number: 2 (lower is better)
Translates to: RESSPNSLRSCGPRY*SVSPVIASSPSSSD
Trigger: GTCTGATGATGAAGGTGAAGATGCAATGACCGGGGACACAGACAAATATCTTGGGCCACAGGACCTTAAGGAATTGGGTGATGATTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR TCA 90 bp TCTTGGTTCCACAGTGACAATTGGGCTAAAAGTTGCTTTGTTTCCAAGGATCTTTTACCAAACGGCAGGTaGTTCGAGTGGGGGCCGTAC +
Preference number: 2 (lower is better)
Translates to: SWFHSDNWAKSCFVSKDLLPNGR*FEWGPY
Trigger: GTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAA...AAGATCCTTGGAAACAAAGCAACTTTTAGCCCAATTGTCACTGTGGAACCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGAAGCTTTCCATATTTTaGTGCCACATGAAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLKLSIF*CHMKRS
Trigger: ACTCCTCTTCATGTGGCAGCAAAATATGGAAAGCTT...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp GGAGACCATAACTTAAATTCATTAGTGCTATGTTTTAACCAGCTAAGACAGCCCCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: GDHNLNSLVLCFNQLRQPPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...GGGCTGTCTTAGCTGGTTAAAACATAGCACTAATGAATTTAAGTTATGGTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGACCACTGCAAAATACTaGGGGAAATCTTTCGTGATA +
Preference number: 2 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLTTAKY*GKSFVI
Trigger: TATCACGAAAGATTTCCCCCAGTATTTTGCAGTGGT...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGCTTTCCATATTTTGCTaGCACATGAAGAGGAGTAAA +
Preference number: 2 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLLSIFC*HMKRSK
Trigger: TTTACTCCTCTTCATGTGGCAGCAAAATATGGAAAG...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp AGCTTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACTCAGGCCGCTCTTATTaGTCAGGTTCACATTCGCAT +
Preference number: 2 (lower is better)
Translates to: SFCSRCKTYPNLSWDWQNSGRSY*SGSHSH
Trigger: ATGCGAATGTGAACCTGAGCAATAAGAGCGGCCTGA...GTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp CTCAGATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCACAGAGCATGTGTATTTaGGTCGAGAACATTTCGCTA +
Preference number: 2 (lower is better)
Translates to: LRLVLPVLSVSSFATVLAQSMCI*VENISL
Trigger: TAGCGAAATGTTCTCGACGCAAATACACATGCTCTG...TGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
3UTR-3UTR GCA 90 bp GACCATAACTTAAATTCATTAGTGCTATGTTTTAACCAGCTAAGACAGCCCCAGGTGCCCTTCCTGAGCTaGGAGATGGACGGAAGCAAT +
Preference number: 2 (lower is better)
Translates to: DHNLNSLVLCFNQLRQPQVPFLS*EMDGSN
Trigger: ATTGCTTCCGTCCATCTCGCAGCTCAGGAAGGGCAC...CTGGGGCTGTCTTAGCTGGTTAAAACATAGCACTAATGAATTTAAGTTATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp AGCTTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACGTTTACGAGGACTTCTaGCACATTCACTCGATCTTC +
Preference number: 2 (lower is better)
Translates to: SFCSRCKTYPNLSWDWQNVYEDF*HIHSIF
Trigger: GAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAAC...GTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR GCA 90 bp CATCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGTGCTCCTTTTCTCACTaGCGGCCTTTTCACTCTTTG +
Preference number: 2 (lower is better)
Translates to: HQQGHGKHCSHLQNFWCLCSFSH*RPFHSL
Trigger: CAAAGAGTGAAAAGGCCGGCAGTGAGAAAAGGAGCA...CAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR-3UTR CCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACAAAACTGTTAACAGCATaGCTTCTTGTATATACACTG +
Preference number: 2 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTKLLTA*LLVYTL
Trigger: CAGTGTATATACAAGAAGCCATGCTGTTAACAGTTT...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR-3UTR CCA 90 bp CTGGGAAAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTACTTTTGCAGAATGCTaGAGCAGGAAATTAACAATC +
Preference number: 2 (lower is better)
Translates to: LGKMLEQGALWCCSEFHLTFAEC*SRKLTI
Trigger: GATTGTTAATTTCCTGCTCCAGCATTCTGCAAAAGT...AAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGATTGTGATTGGTTTATaGAATTTCCGTCTTCTTGGT +
Preference number: 2 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLIVIGL*NFRLLG
Trigger: ACCAAGAAGACGGAAATTCCATAAACCAATCACAAT...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR TCA 90 bp TATGACCTCCTGCTTGATCGGAACCAAAGCATATCACATATACCTAAAGTCAAACCTCCTCTTCTAGGGTaGAGTCACTTGAGACCCCTA +
Preference number: 2 (lower is better)
Translates to: YDLLLDRNQSISHIPKVKPPLLG*SHLRPL
Trigger: TAGGGGTCTCAAGTGACTTCACCCTAGAAGAGGAGG...TTTGACTTTAGGTATATGTGATATGCTTTGGTTCCGATCAAGCAGGAGGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR-3UTR TCA 90 bp AGAATGGTTACAAATGATTGGCTTACTGAAAGGTGTCTACATCTTATAGCCAGTCCTCCTCTTCTAGGGTaGAGTCACTTGAGACCCCTA +
Preference number: 2 (lower is better)
Translates to: RMVTNDWLTERCLHLIASPPLLG*SHLRPL
Trigger: TAGGGGTCTCAAGTGACTTCACCCTAGAAGAGGAGG...ACTGGCTATAAGATGTAGACACCTTTCAGTAAGCCAATCATTTGTAACCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
3UTR-3UTR TCA 90 bp TCTTTGCTTCTTGCGACTTCCTCAAAATTCTCTTGTTGCTCTAAAGTTTTGTCCTTCACTCGATCTTCTTaGGCAGCCAAATGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: SLLLATSSKFSCCSKVLSFTRSS*AAKWSG
Trigger: CCCACTCCATTTGGCTGCTCAAGAAGATCGAGTGAA...GGACAAAACTTTAGAGCAACAAGAGAATTTTGAGGAAGTCGCAAGAAGCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 90 bp CCCCATTCTTTATGCAAAGTAGATTATCCGTGCATTTCTTCTGCATaGATAGTGAATCCTTACTGGGGACAACTCACTCCATTTGGCAAC +
Preference number: 2 (lower is better)
Translates to: PHSLCKVDYPCISSA*IVNPYWGQLTPFGN
Trigger: GTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTGCATAAAGAATGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CAA 90 bp TTCCGTCTTCTTGGTTCCACAGTGACAATTGGGCTAAAAGTTGCTTaGTTTCCAAGGATCTTTTTCACAATTTCATCTGGAACAGGCTGG +
Preference number: 2 (lower is better)
Translates to: FRLLGSTVTIGLKVA*FPRIFFTISSGTGW
Trigger: CCAGCCTGTTCCAGATGAAATTGTGAAAAAGATCCTTGGAAACAAAGCAACTTTTAGCCCAATTGTCACTGTGGAACCAAGAAGACGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR TCA 90 bp GAACAGAGAATAGCATGTAGTGAGCACTCCAGTTTTAGTGATGATGATCACAGTTGGCCAGGACTCATATaGCAAGGGATTAGACAACTA +
Preference number: 2 (lower is better)
Translates to: EQRIACSEHSSFSDDDHSWPGLI*QGIRQL
Trigger: TAGTTGTCTAATCCCTTGTCATATGAGTCCTGGCCA...ACTGTGATCATCATCACTAAAACTGGAGTGCTCACTACATGCTATTCTCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR-3UTR TCA 90 bp CAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGAAATATCAACGACGTGTTTCTTaGGGTACTTTCTTCCTCATC +
Preference number: 2 (lower is better)
Translates to: QGHGKHCSHLQNFWCLKYQRRVS*GTFFLI
Trigger: GATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTG...ATATTTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR-3UTR GCA 90 bp TTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACGCGTTAACTTTTGCAGAATaGTGGAGCAGGAAATTAACA +
Preference number: 2 (lower is better)
Translates to: FCSRCKTYPNLSWDWQNALTFAE*WSRKLT
Trigger: TGTTAATTTCCTGCTCCAGCATTCTGCAAAAGTTAA...CGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR TCA 90 bp GCCTCCACACCATCATCAAATTTTCTACTCAAAATTCATTATAGAGGCTGGGTGTTAGTTGCTTTTAAGTaGCTGCCTTGTCTGACTGCA +
Preference number: 2 (lower is better)
Translates to: ASTPSSNFLLKIHYRGWVLVAFK*LPCLTA
Trigger: TGCAGTCAGACAAGGCAGTCACTTAAAAGCAACTAA...CACCCAGCCTCTATAATGAATTTTGAGTAGAAAATTTGATGATGGTGTGGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000459732.2
3UTR-3UTR GCA 90 bp CCATATGCTAAGCTGGTAACTAGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTGGGCTAAAAGCAACTaGATGTTGATGGTTCCTAGA +
Preference number: 2 (lower is better)
Translates to: PYAKLVTRIKVKTAMVSAWAKSN*MLMVPR
Trigger: TCTAGGAACCATCAACATGCAGTTGCTTTTAGCCCA...GGCAGAGACCATGGCTGTTTTAACTTTTATTCTAGTTACCAGCTTAGCATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR-3UTR GCA 90 bp TCTTGGTTCCACAGTGACAATTGGGCTAAAAGTTGCTTTGTTTCCAAGGATCTTCTGATTATCGTAATGTaGAGCTACATGCAGTGGTGT +
Preference number: 2 (lower is better)
Translates to: SWFHSDNWAKSCFVSKDLLIIVM*SYMQWC
Trigger: ACACCACTGCATGTAGCTGCACATTACGATAATCAG...AAGATCCTTGGAAACAAAGCAACTTTTAGCCCAATTGTCACTGTGGAACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR TCA 90 bp GCCTCCACACCATCATCAAATTTTCTACTCAAAATTCATTATAGAGGCTGGGTGCTCTGGCAGAGAAAATaGGAAACTAAGTCAAGCAAA +
Preference number: 2 (lower is better)
Translates to: ASTPSSNFLLKIHYRGWVLWQRK*ETKSSK
Trigger: TTTGCTTGACTTAGTTTCTCATTTTCTCTGCCAGAG...CACCCAGCCTCTATAATGAATTTTGAGTAGAAAATTTGATGATGGTGTGGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000459732.2
3UTR-3UTR CCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGATGGTTACAAATGATTaGCTTACTGAAAGGTGTCTA +
Preference number: 2 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRMVTND*LTERCL
Trigger: TAGACACCTTTCAGTAAGCCAATCATTTGTAACCAT...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR-3UTR TCA 90 bp GGAGACCATAACTTAAATTCATTAGTGCTATGTTTTAACCAGCTAAGACAGCCCTATTTTGCTGCCACATaGAGAGGAGTAAATCCTTTC +
Preference number: 2 (lower is better)
Translates to: GDHNLNSLVLCFNQLRQPYFAAT*RGVNPF
Trigger: GAAAGGATTTACTCCTCTTCATGTGGCAGCAAAATA...GGGCTGTCTTAGCTGGTTAAAACATAGCACTAATGAATTTAAGTTATGGTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp TCCATTTGGCAACAATCTTTAATGGACAGGCAATATATAACATTGCTGAAAGTCCATGCCATTAATGTGTaGAAGCAGCGAACACACACA +
Preference number: 2 (lower is better)
Translates to: SIWQQSLMDRQYITLLKVHAINV*KQRTHT
Trigger: TGTGTGTGTTCGCTGCTTCCACACATTAATGGCATG...GACTTTCAGCAATGTTATATATTGCCTGTCCATTAAAGATTGTTGCCAAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CAA 90 bp AAGGAAGATTCTACGGGATCATTCATTTTGGCAAAAACAACAAACTaGGCCATATATGGAACACATATCAATTCTCTGTACAGTTGCGTG +
Preference number: 2 (lower is better)
Translates to: KEDSTGSFILAKTTN*AIYGTHINSLYSCV
Trigger: CACGCAACTGTACAGAGAATTGATATGTGTTCCATATATGGCCAAGTTTGTTGTTTTTGCCAAAATGAATGATCCCGTAGAATCTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CCA 90 bp GGAGACCATAACTTAAATTCATTAGTGCTATGTTTTAACCAGCTAAGACAGCCCTTCCACAGTGACAATTaGGCTAAAAGTTGCTTTGTT +
Preference number: 2 (lower is better)
Translates to: GDHNLNSLVLCFNQLRQPFHSDN*AKSCFV
Trigger: AACAAAGCAACTTTTAGCCCAATTGTCACTGTGGAA...GGGCTGTCTTAGCTGGTTAAAACATAGCACTAATGAATTTAAGTTATGGTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 90 bp ATTAACAACCGCAAACCACAAAAGAAAATAGCAGAGCATGTGTATTaGCGTCGAGAACATTTCGCTAAATTCACATCTTCATCCAAAGAA +
Preference number: 2 (lower is better)
Translates to: INNRKPQKKIAEHVY*RREHFAKFTSSSKE
Trigger: TTCTTTGGATGAAGATGTGAATTTAGCGAAATGTTCTCGACGCAAATACACATGCTCTGCTATTTTCTTTTGTGGTTTGCGGTTGTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
3UTR-3UTR GCA 90 bp AGAATGGTTACAAATGATTGGCTTACTGAAAGGTGTCTACATCTTATAGCCAGTTTCTTGTATATACACTaGATTGCTAATTGCACACGC +
Preference number: 2 (lower is better)
Translates to: RMVTNDWLTERCLHLIASFLYIH*IANCTR
Trigger: GCGTGTGCAATTAGCAATGCAGTGTATATACAAGAA...ACTGGCTATAAGATGTAGACACCTTTCAGTAAGCCAATCATTTGTAACCATTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
3UTR-3UTR GCA 90 bp CTGGTGCCACACAGTAAATTGCCATTTTACCTTACAATTTGTATACTATATGCTATCAGAGTGTTTATTTaGAGACTCTGGCAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: LVPHSKLPFYLTICILYAIRVFI*RLWQRK
Trigger: TTTTCTCTGCCAGAGTCTGCAAATAAACACTCTGAT...AGCATATAGTATACAAATTGTAAGGTAAAATGGCAATTTACTGTGTGGCACCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459732.2
3UTR TCA 72 bp CCGAGGAGCAGCGACACCATGTCCACGTGCCCTTCCTaGGCTGCGAGATGGACGGAAGCAATTCCTTGCCGG +
Preference number: 3 (lower is better)
Translates to: PRSSDTMSTCPS*AARWTEAIPCR
Trigger: CCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp TCTTTGCGGCTGCGTGAGGTGAGGCTCCTTGGTCCAAAAGCAGAAGGGCCACTTCCGCACAACTTCAGCTaGGCCGGAGCGAGCTGCCAT +
Preference number: 3 (lower is better)
Translates to: SLRLREVRLLGPKAEGPLPHNFS*AGASCH
Trigger: ATGGCAGCTCGCTCCGGCCAAGCTGAAGTTGTGCGG...AAGTGGCCCTTCTGCTTTTGGACCAAGGAGCCTCACCTCACGCAGCCGCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp GAGCAGCGACACCATGTCCACGTGCCCTTCCTGAGCTaGGAGATGGACGGAAGCAATTCCTTGCCGGGTAAC +
Preference number: 3 (lower is better)
Translates to: EQRHHVHVPFLS*EMDGSNSLPGN
Trigger: GTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAAGGGCACGTGGACATGGTGTCGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp CAGATACCGCACAACTTCAGCTTGGCCGGAGCGAGCTaGCATGTGCAGTGCTGTTTCTCCTCTCTGGGGAAC +
Preference number: 3 (lower is better)
Translates to: QIPHNFSLAGAS*HVQCCFSSLGN
Trigger: GTTCCCCAGAGAGGAGAAACAGCACTGCACATGGCAGCTCGCTCCGGCCAAGCTGAAGTTGTGCGGTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 72 bp GCTCCGTCTTGTACCAGATACCGCACAACTTCAGCTTaGCCGGAGCGAGCTGCCATGTGCAGTGCTGTTTCT +
Preference number: 3 (lower is better)
Translates to: APSCTRYRTTSA*PERAAMCSAVS
Trigger: AGAAACAGCACTGCACATGGCAGCTCGCTCCGGCCAAGCTGAAGTTGTGCGGTATCTGGTACAAGACGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 72 bp GGGCGGAAAGGTGAAGTGGGGTGTACCCAGAAGTTGTaGCTGCATTTGGAGATGCCCCTTGCTGCAACAGCT +
Preference number: 3 (lower is better)
Translates to: GRKGEVGCTQKL*LHLEMPLAATA
Trigger: AGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTTTCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 72 bp ACGGCAGGTGATTCGAGTGGGGGCCGTACACTTGCGTaGAGGAATGATGATTCTCATCCCGTGATGACGGCT +
Preference number: 3 (lower is better)
Translates to: TAGDSSGGRTLA*RNDDSHPVMTA
Trigger: AGCCGTCATCACGGGATGAGAATCATCATTCCTCCACGCAAGTGTACGGCCCCCACTCGAATCACCTGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp TCTTTGCGGCTGCGTGAGGTGAGGCTCCTTGGTCCAAAAGCAGAAGGGCCACTTTACCTGAGCTCCGTCTaGTACCAGATACCGCACAAC +
Preference number: 3 (lower is better)
Translates to: SLRLREVRLLGPKAEGPLYLSSV*YQIPHN
Trigger: GTTGTGCGGTATCTGGTACAAGACGGAGCTCAGGTA...AAGTGGCCCTTCTGCTTTTGGACCAAGGAGCCTCACCTCACGCAGCCGCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 72 bp GCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTTaGGGTACTTTCTTCCTCATCGGACAACTCGGACTG +
Preference number: 3 (lower is better)
Translates to: ATPGSLGQRRVS*GTFFLIGQLGL
Trigger: CAGTCCGAGTTGTCCGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR-3UTR CAA 90 bp CCTATCCGAACTTATCTTGGGACTGGCAGAACGCGCTCCGAGACTAAAGCCCATGCGTATAACCATTCTTaGCGGCTGCGTGAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: PIRTYLGTGRTRSETKAHAYNHS*RLREVR
Trigger: CCTCACCTCACGCAGCCGCAAAGAATGGTTATACGC...ATGGGCTTTAGTCTCGGAGCGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp ATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTGTGCCGGGTAACTGCGTaGGCATCAGCACCATATTCC +
Preference number: 3 (lower is better)
Translates to: IPSLSGRPHEPLGLRGLLCRVTA*ASAPYS
Trigger: GGAATATGGTGCTGATGCCAACGCAGTTACCCGGCA...CAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp CTCTGCAGGCAGGGAATCATCACCCAATTCCTTAAGGTCCTGTGGCCCAAGATAGACGGAAGCAATTCCTaGCCGGGTAACTGCGTTGGC +
Preference number: 3 (lower is better)
Translates to: LCRQGIITQFLKVLWPKIDGSNS*PGNCVG
Trigger: GCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTC...TATCTTGGGCCACAGGACCTTAAGGAATTGGGTGATGATTCCCTGCCTGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 72 bp CAGTGGCGTATAACCATTCTTTGCGGCTGCGTGAGGTaGGGCTCCTTGGTCCAAAAGCAGAAGGGCCACTTT +
Preference number: 3 (lower is better)
Translates to: QWRITILCGCVR*GSLVQKQKGHF
Trigger: AAAGTGGCCCTTCTGCTTTTGGACCAAGGAGCCTCACCTCACGCAGCCGCAAAGAATGGTTATACGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 72 bp GGTTGGCCAGTTTATGTCTCTTTACCAAACGGCAGGTaGTTCGAGTGGGGGCCGTACACTTGCGTGGAGGAA +
Preference number: 3 (lower is better)
Translates to: GWPVYVSLPNGR*FEWGPYTCVEE
Trigger: TTCCTCCACGCAAGTGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp GGAAAGGTGAAGTGGGGTGTACCCAGAAGTTGTGGCTaGATTTGGAGATGCCCCTTGCTGCAACAGCTGTTG +
Preference number: 3 (lower is better)
Translates to: GKVKWGVPRSCG*IWRCPLLQQLL
Trigger: CAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGAAGTTGTGGCTGCATTaGGAGATGCCCCTTGCTGCA +
Preference number: 3 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLKLWLH*EMPLAA
Trigger: TGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTT...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp GTGTGTATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGAGTCAGGCCGCTCTTATaGCTCAGGTTCACATTCGCA +
Preference number: 3 (lower is better)
Translates to: VCIPSLSGRPHEPLGLRGVRPLL*LRFTFA
Trigger: TGCGAATGTGAACCTGAGCAATAAGAGCGGCCTGAC...TCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGATACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 72 bp AGTGGTGTGTATCCCATCTTTGTCTGGGCGTCCACATaGGCCCCTTGGTTTACGAGGACTTCTGCCACATTC +
Preference number: 3 (lower is better)
Translates to: SGVYPIFVWAST*APWFTRTSATF
Trigger: GAATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGATACACACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp TGGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGATaGCCCTTGCTGCAACAGCTGTTGTACTATGTCTGC +
Preference number: 3 (lower is better)
Translates to: WGVPRSCGCIWR*PLLQQLLYYVC
Trigger: GCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp GGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTaGCACATTCACTCGATCTTCTTGAGCAGCCAAATG +
Preference number: 3 (lower is better)
Translates to: GVHMSPLVYEDF*HIHSIFLSSQM
Trigger: CATTTGGCTGCTCAAGAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp AGAACGCGCTCCGAGACTAAAGCCCATGTAACCCTCTaGAGGCAGGGAATCATCACCCAATTCCTTAAGGTC +
Preference number: 3 (lower is better)
Translates to: RTRSETKAHVTL*RQGIITQFLKV
Trigger: GACCTTAAGGAATTGGGTGATGATTCCCTGCCTGCAGAGGGTTACATGGGCTTTAGTCTCGGAGCGCGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp CTGGGAAAGATGCTTGAACAAGGGGCACTGTGGTGCTaGTCAGAATTCCACCTTCAGGACCAATCTGGTTGC +
Preference number: 3 (lower is better)
Translates to: LGKMLEQGALWC*SEFHLQDQSGC
Trigger: GCAACCAGATTGGTCCTGAAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 72 bp TTCTTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTaGCCACCCCGGGAAGTCTCGGACAACGACGTGTTT +
Preference number: 3 (lower is better)
Translates to: FLSLADFVVTEG*PPREVSDNDVF
Trigger: AAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR CCA 72 bp GGCTACTATTGCCATCCTGATATCTGTCCGTTCACATaGACTCTGTGGACTGCTCCTTTTCTCACTGCCGGC +
Preference number: 3 (lower is better)
Translates to: GYYCHPDICPFT*TLWTAPFLTAG
Trigger: GCCGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR-3UTR CAA 90 bp CATTCGCATTTCTACCGAGGAGCAGCGACACCATGTCCACGTGCCCTTCCTGAGCAAGCTTTCCATATTTaGCTGCCACATGAAGAGGAG +
Preference number: 3 (lower is better)
Translates to: HSHFYRGAATPCPRALPEQAFHI*LPHEEE
Trigger: CTCCTCTTCATGTGGCAGCAAAATATGGAAAGCTTG...CTCAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTCGGTAGAAATGCGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACACTGTGTCCCCGGTCATaGCATCTTCACCTTCATCAT +
Preference number: 3 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTLCPRS*HLHLHH
Trigger: ATGATGAAGGTGAAGATGCAATGACCGGGGACACAG...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGCATATTCCAGCAGAGTaGTCGCTATGTCCATCTGGT +
Preference number: 3 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLHIPAE*SLCPSG
Trigger: ACCAGATGGACATAGCGACAACTCTGCTGGAATATG...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 72 bp TTTACGAGGACTTCTGCCACATTCACTCGATCTTCTTaGGCAGCCAAATGGAGTGGGGTCAGGCCGCTCTTA +
Preference number: 3 (lower is better)
Translates to: FTRTSATFTRSS*AAKWSGVRPLL
Trigger: TAAGAGCGGCCTGACCCCACTCCATTTGGCTGCTCAAGAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp CCAGAAGTTGTGGCTGCATTTGGAGATGCCCCTTGCTaGAACAGCTGTTGTACTATGTCTGCTTTCCCCAGT +
Preference number: 3 (lower is better)
Translates to: PEVVAAFGDAPC*NSCCTMSAFPS
Trigger: ACTGGGGAAAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp TACCCAGAAGTTGTGGCTGCATTTGGAGATGCCCCTTaGTGCAACAGCTGTTGTACTATGTCTGCTTTCCCC +
Preference number: 3 (lower is better)
Translates to: YPEVVAAFGDAP*CNSCCTMSAFP
Trigger: GGGGAAAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 72 bp TCAGTGACCACAGAGGCACAAAGAGGACCAATGGGGTaGATTGGCCAGGACTCATATGACAAGGGATTAGAC +
Preference number: 3 (lower is better)
Translates to: SVTTEAQRGPMG*IGQDSYDKGLD
Trigger: GTCTAATCCCTTGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGGTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CCA 72 bp GTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTaGAGATGCCCCTTGCTGCAACAGCTGTTGTACTAT +
Preference number: 3 (lower is better)
Translates to: VKWGVPRSCGCI*RCPLLQQLLYY
Trigger: ATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp TTAAGGTCCTGTGGCCCAAGATATTTGTCTGTGTCCCCGGTCATTGCATCTTCAGGGTGTACCCAGAAGTaGTGGCTGCATTTGGAGATG +
Preference number: 3 (lower is better)
Translates to: LRSCGPRYLSVSPVIASSGCTQK*WLHLEM
Trigger: CATCTCCAAATGCAGCCACAACTTCTGGGTACACCC...TGAAGATGCAATGACCGGGGACACAGACAAATATCTTGGGCCACAGGACCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 72 bp CACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGGTaGAGTCACTTGAGACCCCTATTTGTTAAATGCATT +
Preference number: 3 (lower is better)
Translates to: HPHPESLPPLLG*SHLRPLFVKCI
Trigger: AATGCATTTAACAAATAGGGGTCTCAAGTGACTTCACCCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
3UTR CCA 72 bp CACATTCACTCGATCTTCTTGAGCAGCCAAATGGAGTaGGGTCAGGCCGCTCTTATTGCTCAGGTTCACATT +
Preference number: 3 (lower is better)
Translates to: HIHSIFLSSQME*GQAALIAQVHI
Trigger: AATGTGAACCTGAGCAATAAGAGCGGCCTGACCCCACTCCATTTGGCTGCTCAAGAAGATCGAGTGAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp CTGGGAAAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTAATGTGGAGTGGTGTTaGGTCATCCTTAGCTTTAGC +
Preference number: 3 (lower is better)
Translates to: LGKMLEQGALWCCSEFHLNVEWC*VILSFS
Trigger: GCTAAAGCTAAGGATGACCAAACACCACTCCACATT...AAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp CAGATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTaGTACTGTGCTGGCAGCATGACTGCAAAGTGGGAA +
Preference number: 3 (lower is better)
Translates to: QIGSPSFVSELF*YCAGSMTAKWE
Trigger: TTCCCACTTTGCAGTCATGCTGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
3UTR GCA 72 bp GCTCTTTGGATGGCACAAGGAGTTCTTCAATCATCATaGTGTCCCGTGCATAGGAGCTTCTGTTCAAGGTGT +
Preference number: 3 (lower is better)
Translates to: ALWMAQGVLQSS*CPVHRSFCSRC
Trigger: ACACCTTGAACAGAAGCTCCTATGCACGGGACAGCATGATGATTGAAGAACTCCTTGTGCCATCCAAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp TTCTGTCCAACTAAGTCCCAGGTGATCGGCTACTATTaGCATCCTGATATCTGTCCGTTCACATGGACTCTG +
Preference number: 3 (lower is better)
Translates to: FCPTKSQVIGYY*HPDICPFTWTL
Trigger: CAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTAGCCGATCACCTGGGACTTAGTTGGACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR-3UTR CAA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGGTGTTTCTCTGTGATTaGATCATTCCATCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: TRISEESPPPRIPPSSSRVFLCD*IIPSPS
Trigger: AGAAGGAGATGGAATGATCAAATCACAGAGAAACAC...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
3UTR TCA 72 bp AGTGGTGTTTGGTCATCCTTAGCTTTAGCTTCTACCTaGGCTCCGTCTTGTACCAGATACCGCACAACTTCA +
Preference number: 3 (lower is better)
Translates to: SGVWSSLALAST*APSCTRYRTTS
Trigger: TGAAGTTGTGCGGTATCTGGTACAAGACGGAGCTCAGGTAGAAGCTAAAGCTAAGGATGACCAAACACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 72 bp TGTACTATGTCTGCTTTCCCCAGTCGGGCTGAAATGTaGAGTGGTGTTTGGTCATCCTTAGCTTTAGCTTCT +
Preference number: 3 (lower is better)
Translates to: CTMSAFPSRAEM*SGVWSSLALAS
Trigger: AGAAGCTAAAGCTAAGGATGACCAAACACCACTCCACATTTCAGCCCGACTGGGGAAAGCAGACATAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp TCTTGGTTCCACAGTGACAATTGGGCTAAAAGTTGCTTTGTTTCCAAGGATCTTCTATCCGAACTTATCTaGGGACTGGCAGAACGCGCT +
Preference number: 3 (lower is better)
Translates to: SWFHSDNWAKSCFVSKDLLSELI*GLAERA
Trigger: AGCGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAG...AAGATCCTTGGAAACAAAGCAACTTTTAGCCCAATTGTCACTGTGGAACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp TCTTTGCTTCTTGCGACTTCCTCAAAATTCTCTTGTTGCTCTAAAGTTTTGTCCGTGGGGGCCGTACACTaGCGTGGAGGAATGATGATT +
Preference number: 3 (lower is better)
Translates to: SLLLATSSKFSCCSKVLSVGAVH*RGGMMI
Trigger: AATCATCATTCCTCCACGCAAGTGTACGGCCCCCAC...GGACAAAACTTTAGAGCAACAAGAGAATTTTGAGGAAGTCGCAAGAAGCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp TTCTGTCCAACTAAGTCCCAGGTGATCGGCTACTATTGCCATCCTGATATCTGTCGGCCTTTTCACTCTTaGATTTTAAAGGTGCTGCCT +
Preference number: 3 (lower is better)
Translates to: FCPTKSQVIGYYCHPDICRPFHS*ILKVLP
Trigger: AGGCAGCACCTTTAAAATCAAAGAGTGAAAAGGCCG...ACAGATATCAGGATGGCAATAGTAGCCGATCACCTGGGACTTAGTTGGACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR TCA 72 bp AAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATaGCAAGGGATTAGACAACTACCTTTTGCCAGAAAA +
Preference number: 3 (lower is better)
Translates to: KRTNGVDWPGLI*QGIRQLPFARK
Trigger: TTTTCTGGCAAAAGGTAGTTGTCTAATCCCTTGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR TCA 72 bp TCCTCAGTCTTGATGGAACTCCAGGATGATACCAAATaGACAGCGAGGAACATCAGGATGCCAAAAAGTCCT +
Preference number: 3 (lower is better)
Translates to: SSVLMELQDDTK*TARNIRMPKSP
Trigger: AGGACTTTTTGGCATCCTGATGTTCCTCGCTGTTCATTTGGTATCATCCTGGAGTTCCATCAAGACTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR TCA 72 bp CCATTCACAGTGAGTTCATTGGGGGAGGCGTTGTTCTaGAGTAAGACATTTATTATATGCGTATGCCCCTGC +
Preference number: 3 (lower is better)
Translates to: PFTVSSLGEALF*SKTFIICVCPC
Trigger: GCAGGGGCATACGCATATAATAAATGTCTTACTTCAGAACAACGCCTCCCCCAATGAACTCACTGTGAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 72 bp CAGCATCTGGAGATGCACTTTTCTGTAGCAGGAGATTaGCGACTTCAAGCTTTCCATATTTTGCTGCCACAT +
Preference number: 3 (lower is better)
Translates to: QHLEMHFSVAGD*RLQAFHILLPH
Trigger: ATGTGGCAGCAAAATATGGAAAGCTTGAAGTCGCCAATCTCCTGCTACAGAAAAGTGCATCTCCAGATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp GACCATAACTTAAATTCATTAGTGCTATGTTTTAACCAGCTAAGACAGCCCCAGGTGTGTATCCCATCTTaGTCTGGGCGTCCACATGAG +
Preference number: 3 (lower is better)
Translates to: DHNLNSLVLCFNQLRQPQVCIPS*SGRPHE
Trigger: CTCATGTGGACGCCCAGACAAAGATGGGATACACAC...CTGGGGCTGTCTTAGCTGGTTAAAACATAGCACTAATGAATTTAAGTTATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 72 bp TGCAAATTCACAGTCAGGTTGTACAAATATAAGAAATaGGGCTGTGGCAGTGATACCTGTAGACCCCACACC +
Preference number: 3 (lower is better)
Translates to: CKFTVRLYKYKK*GCGSDTCRPHT
Trigger: GGTGTGGGGTCTACAGGTATCACTGCCACAGCCTCATTTCTTATATTTGTACAACCTGACTGTGAATTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR GCA 72 bp CAGCATGGCTTCTTGTATATACACTGCATTGCTAATTaGACACGCGCCAATCCGGAAATGAAAGTGATTTCC +
Preference number: 3 (lower is better)
Translates to: QHGFLYIHCIAN*TRANPEMKVIS
Trigger: GGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAAGAAGCCATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
3UTR CCA 72 bp ACAGCCAAACGTGAGCTGATGCTGACAATAGTTTATTaGCCATGGAGAAAATCCTCAGTCTTGATGGAACTC +
Preference number: 3 (lower is better)
Translates to: TAKRELMLTIVY*PWRKSSVLMEL
Trigger: GAGTTCCATCAAGACTGAGGATTTTCTCCATGGCCAATAAACTATTGTCAGCATCAGCTCACGTTTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR-3UTR CAA 90 bp CAAAGTAGATTATCCGTGCATTTCTTCTGCATTGATAGTGAATCCTTACTGGGGCACGCAGTGTATGGGTaGCAAATTCACAGTCAGGTT +
Preference number: 3 (lower is better)
Translates to: QSRLSVHFFCIDSESLLGHAVYG*QIHSQV
Trigger: AACCTGACTGTGAATTTGCAACCCATACACTGCGTG...CCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR-3UTR CAA 90 bp CATCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGACAACGACGTGTTTCTaGAGGTACTTTCTTCCTCAT +
Preference number: 3 (lower is better)
Translates to: HQQGHGKHCSHLQNFWCLTTTCF*RYFLPH
Trigger: ATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTGT...CAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR GCA 72 bp AGGATGATACCAAATGAACAGCGAGGAACATCAGGATaGCAAAAAGTCCTTATTTACAGAGGAAAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: RMIPNEQRGTSG*QKVLIYRGKEA
Trigger: AGCCTCCTTTCCTCTGTAAATAAGGACTTTTTGGCATCCTGATGTTCCTCGCTGTTCATTTGGTATCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR-3UTR CAA 90 bp TCTTTGCTTCTTGCGACTTCCTCAAAATTCTCTTGTTGCTCTAAAGTTTTGTCCGGTGTAGTGTCCCCTTaGTATCCATTGGATACACCT +
Preference number: 3 (lower is better)
Translates to: SLLLATSSKFSCCSKVLSGVVSP*YPLDTP
Trigger: AGGTGTATCCAATGGATACAAAGGGGACACTACACC...GGACAAAACTTTAGAGCAACAAGAGAATTTTGAGGAAGTCGCAAGAAGCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR TCA 72 bp ACAGAATTTATAAGCTGGGAGCTTGCAGGGCACATATaGATGTTAGAGATTATCTCTTCAGTGACCACAGAG +
Preference number: 3 (lower is better)
Translates to: TEFISWELAGHI*MLEIISSVTTE
Trigger: CTCTGTGGTCACTGAAGAGATAATCTCTAACATTCATATGTGCCCTGCAAGCTCCCAGCTTATAAATTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR TCA 72 bp ACATTTATTATATGCGTATGCCCCTGCTGTGCTGCTTaGTGTAATGGCGTATACCCATTCTTTGTTTTGGCA +
Preference number: 3 (lower is better)
Translates to: TFIICVCPCCAA*CNGVYPFFVLA
Trigger: TGCCAAAACAAAGAATGGGTATACGCCATTACATCAAGCAGCACAGCAGGGGCATACGCATATAATAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp CCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTaGAGGGCACATATGAATGTTAGAGATTATCTCTTC +
Preference number: 3 (lower is better)
Translates to: PHEMHRIYKLGA*RAHMNVRDYLF
Trigger: GAAGAGATAATCTCTAACATTCATATGTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR-3UTR CAA 90 bp TCTTGGTTCCACAGTGACAATTGGGCTAAAAGTTGCTTTGTTTCCAAGGATCTTGGGCTTGAAACAAGATaGACATTGTCTAAGGTGTCT +
Preference number: 3 (lower is better)
Translates to: SWFHSDNWAKSCFVSKDLGLETR*TLSKVS
Trigger: AGACACCTTAGACAATGTCAATCTTGTTTCAAGCCC...AAGATCCTTGGAAACAAAGCAACTTTTAGCCCAATTGTCACTGTGGAACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR-3UTR CAA 90 bp CATCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGTTCCATAATCAAATATaGGTCCTTCTAGCAGTGTCA +
Preference number: 3 (lower is better)
Translates to: HQQGHGKHCSHLQNFWCLFHNQI*VLLAVS
Trigger: TGACACTGCTAGAAGGACCAATATTTGATTATGGAA...CAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR-3UTR CAA 90 bp CCATATGCTAAGCTGGTAACTAGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTTAGACAACTACCTTTaGCCAGAAAACACAAGGAGA +
Preference number: 3 (lower is better)
Translates to: PYAKLVTRIKVKTAMVSALDNYL*PENTRR
Trigger: TCTCCTTGTGTTTTCTGGCAAAAGGTAGTTGTCTAA...GGCAGAGACCATGGCTGTTTTAACTTTTATTCTAGTTACCAGCTTAGCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CCA 72 bp GGTCATTGTGATTGGTTTATGGAATTTCCGTCTTCTTaGTTCCACAGTGACAATTGGGCTAAAAGTTGCTTT +
Preference number: 3 (lower is better)
Translates to: GHCDWFMEFPSS*FHSDNWAKSCF
Trigger: AAAGCAACTTTTAGCCCAATTGTCACTGTGGAACCAAGAAGACGGAAATTCCATAAACCAATCACAATGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CCA 72 bp TATATGGAACACATATCAATTCTCTGTACAGTTGCGTaGCTAACCCCACAGTTTCTAAAACTTGATGGCAGT +
Preference number: 3 (lower is better)
Translates to: YMEHISILCTVA*LTPQFLKLDGS
Trigger: ACTGCCATCAAGTTTTAGAAACTGTGGGGTTAGCCACGCAACTGTACAGAGAATTGATATGTGTTCCATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR GCA 72 bp TTCTTTATGCAAAGTAGATTATCCGTGCATTTCTTCTaGATTGATAGTGAATCCTTACTGGGGACAACTCAC +
Preference number: 3 (lower is better)
Translates to: FFMQSRLSVHFF*IDSESLLGTTH
Trigger: GTGAGTTGTCCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTGCATAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CCA 72 bp GATAGTGAATCCTTACTGGGGACAACTCACTCCATTTaGCAACAATCTTTAATGGACAGGCAATATATAACA +
Preference number: 3 (lower is better)
Translates to: DSESLLGTTHSI*QQSLMDRQYIT
Trigger: TGTTATATATTGCCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTCACTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR GCA 72 bp GCCTCAGTAGAATTTAGATTCACGCAGTGTATGGGTTaGAAATTCACAGTCAGGTTGTACAAATATAAGAAA +
Preference number: 3 (lower is better)
Translates to: ASVEFRFTQCMG*KFTVRLYKYKK
Trigger: TTTCTTATATTTGTACAACCTGACTGTGAATTTGCAACCCATACACTGCGTGAATCTAAATTCTACTGAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR TCA 72 bp CTAAGTCAAGCAAATCACAGTTTAGTTGCTTTTAAGTaGCTGCCTTGTCTGACTGCACTTTCAAATTTTATC +
Preference number: 3 (lower is better)
Translates to: LSQANHSLVAFK*LPCLTALSNFI
Trigger: GATAAAATTTGAAAGTGCAGTCAGACAAGGCAGTCACTTAAAAGCAACTAAACTGTGATTTGCTTGACTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459732.2
3UTR GCA 72 bp ATATTTTGGATACTTCTGAGTAAACTTATGACCTCCTaGTTGATCGGAACCAAAGCATATCACATATACCTA +
Preference number: 3 (lower is better)
Translates to: IFWILLSKLMTS*LIGTKAYHIYL
Trigger: TAGGTATATGTGATATGCTTTGGTTCCGATCAAGCAGGAGGTCATAAGTTTACTCAGAAGTATCCAAAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CCA 72 bp GGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTaGTGCCTGAAATATTTCCATAATCAAATATTGGTC +
Preference number: 3 (lower is better)
Translates to: GHGKHCSHLQNF*CLKYFHNQILV
Trigger: GACCAATATTTGATTATGGAAATATTTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR TCA 72 bp TGTAAATGTTTACTTCTGGACAATTTGATCAATTCATaGAACAGAAGCAGTGTGATATGCCTGGGAAATTAC +
Preference number: 3 (lower is better)
Translates to: CKCLLLDNLINS*NRSSVICLGNY
Trigger: GTAATTTCCCAGGCATATCACACTGCTTCTGTTTCATGAATTGATCAAATTGTCCAGAAGTAAACATTTACA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp AGGCGCCGGGCAATGCCAAGGGCAGTATTCCCATTCACAGTGAGTTCATTGGGGGCGGCCACATCCTCATaGCCCTCTCGGGCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RRRAMPRAVFPFTVSSLGAATSS*PSRAER
Trigger: CCTTTCCGCCCGAGAGGGGCATGAGGATGTGGCCGC...CCCCAATGAACTCACTGTGAATGGGAATACTGCCCTTGGCATTGCCCGGCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp GGTGTAGTGTCCCCTTTGTATCCATTGGATACACCTTCTCCTGAGGGCGGGGGCAAACCCAGCCCCTGCTaGTGTCAGAGAGACGCGGGC +
Preference number: 4 (lower is better)
Translates to: GVVSPLYPLDTPSPEGGGKPSPC*CQRDAG
Trigger: GCCCGCGTCTCTCTGACAGCAGCAGGGGCTGGGTTT...GCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GGTGTAGTGTCCCCTTTGTATCCATTGGATACACCTTCTCCTGAGGGCGGGGGCGACGGCTTCCTCTCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GVVSPLYPLDTPSPEGGGDGFLS*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGAGAGGAAGCCGTC...GCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp AGGCGCCGGGCAATGCCAAGGGCAGTATTCCCATTCACAGTGAGTTCATTGGGGTCCACGTGCCCTTCCTaGGCTGCGAGATGGACGGAA +
Preference number: 4 (lower is better)
Translates to: RRRAMPRAVFPFTVSSLGSTCPS*AARWTE
Trigger: TTCCGTCCATCTCGCAGCTCAGGAAGGGCACGTGGA...CCCCAATGAACTCACTGTGAATGGGAATACTGCCCTTGGCATTGCCCGGCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CATTCGCATTTCTACCGAGGAGCAGCGACACCATGTCCACGTGCCCTTCCTGAGGAGGTTGCAGTAAGCTaGGACCGCGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: HSHFYRGAATPCPRALPEEVAVS*DRATAL
Trigger: GAGTGCAGTGGCGCGGTCTCAGCTTACTGCAACCTC...CTCAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTCGGTAGAAATGCGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TTCCTGAGCTGCGAGATGGACGGAAGCAATTCCTTGCCGGGTAACTGCGTTGGCCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: FLSCEMDGSNSLPGNCVGPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...GCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TTCCTGAGCTGCGAGATGGACGGAAGCAATTCCTTGCCGGGTAACTGCGTTGGCTCATCTGGAACAGGCTaGGCCTGGAGGCCCACTCGA +
Preference number: 4 (lower is better)
Translates to: FLSCEMDGSNSLPGNCVGSSGTG*AWRPTR
Trigger: TCGAGTGGGCCTCCAGGCCCAGCCTGTTCCAGATGA...GCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CATTCGCATTTCTACCGAGGAGCAGCGACACCATGTCCACGTGCCCTTCCTGAGGCATTGTTGTCATTCTaGAGCAGCAGGGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: HSHFYRGAATPCPRALPEALLSF*SSRAAA
Trigger: AGCCGCCGCCCTGCTGCTGCAGAATGACAACAATGC...CTCAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTCGGTAGAAATGCGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp GGTGTAGTGTCCCCTTTGTATCCATTGGATACACCTTCTCCTGAGGGCGGGGGCCTCGTGGCCACTCCTTaGTCCACAGTGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GVVSPLYPLDTPSPEGGGLVATP*STVQWC
Trigger: ACACCACTGCACTGTGGAGCAAGGAGTGGCCACGAG...GCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp TTCCTGAGCTGCGAGATGGACGGAAGCAATTCCTTGCCGGGTAACTGCGTTGGCTTGGCCGGAGCGAGCTaGCATGTGCAGTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FLSCEMDGSNSLPGNCVGLAGAS*HVQCCF
Trigger: GAAACAGCACTGCACATGGCAGCTCGCTCCGGCCAA...GCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CATGATCCAAAAGGAACGCGGCCACATCCTCATGCCCCTCTCGGGCGGAAAGGTGTGCCCTTCCTGAGCTaGGAGATGGACGGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: HDPKGTRPHPHAPLGRKGVPFLS*EMDGSN
Trigger: ATTGCTTCCGTCCATCTCGCAGCTCAGGAAGGGCAC...ACCTTTCCGCCCGAGAGGGGCATGAGGATGTGGCCGCGTTCCTTTTGGATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp AGGCGCCGGGCAATGCCAAGGGCAGTATTCCCATTCACAGTGAGTTCATTGGGGCCACTGCCAATGGTGTaGAGCCATCCTCTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: RRRAMPRAVFPFTVSSLGPLPMV*SHPLWL
Trigger: TAGCCACAGAGGATGGCTTCACACCATTGGCAGTGG...CCCCAATGAACTCACTGTGAATGGGAATACTGCCCTTGGCATTGCCCGGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp GTGTGTATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGATTCTTTGCGGCTGCGTaGGGTGAGGCTCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: VCIPSLSGRPHEPLGLRGFFAAA*GEAPWS
Trigger: GGACCAAGGAGCCTCACCTCACGCAGCCGCAAAGAA...TCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGATACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CTGGGAAAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTGGATACACCTTCTCCTaGGGGCGGGGGCACCGGAAT +
Preference number: 4 (lower is better)
Translates to: LGKMLEQGALWCCSEFHLGYTFS*GRGHRN
Trigger: ATTCCGGTGCCCCCGCCCTCAGGAGAAGGTGTATCC...AAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp TTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTGGCCACCCCGGGAAGTCTCGCTCCTCCTGGAAGGCTaGTCAAGCAATCCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSLADFVVTEGWPPREVSLLLEG*SSNPPG
Trigger: TCCAGGCGGATTGCTTGATCAGCCTTCCAGGAGGAG...CGAGACTTCCCGGGGTGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp AGGCGCCGGGCAATGCCAAGGGCAGTATTCCCATTCACAGTGAGTTCATTGGGGCTCCTTGCTCCACAGTaGAGTGGTGTCAGACCATCC +
Preference number: 4 (lower is better)
Translates to: RRRAMPRAVFPFTVSSLGLLAPQ*SGVRPS
Trigger: GGATGGTCTGACACCACTGCACTGTGGAGCAAGGAG...CCCCAATGAACTCACTGTGAATGGGAATACTGCCCTTGGCATTGCCCGGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp TTCCTGAGCTGCGAGATGGACGGAAGCAATTCCTTGCCGGGTAACTGCGTTGGCGGCTGCATTTGGAGATaGCCCTTGCTGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: FLSCEMDGSNSLPGNCVGGCIWR*PLLQQL
Trigger: CAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCC...GCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp ATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTGCGAGGCGCCGGGCAATaGCAAGGGCAGTATTCCCAT +
Preference number: 4 (lower is better)
Translates to: IPSLSGRPHEPLGLRGLLRGAGQ*QGQYSH
Trigger: ATGGGAATACTGCCCTTGGCATTGCCCGGCGCCTCG...CAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp TTCCTGAGCTGCGAGATGGACGGAAGCAATTCCTTGCCGGGTAACTGCGTTGGCGCCCATGTAACCCTCTaGAGGCAGGGAATCATCACC +
Preference number: 4 (lower is better)
Translates to: FLSCEMDGSNSLPGNCVGAHVTL*RQGIIT
Trigger: GGTGATGATTCCCTGCCTGCAGAGGGTTACATGGGC...GCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGGCCATGTTGTGGGGCTaGTGCTGCTGCTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRAMLWG*CCCSFQ
Trigger: CTGGAAGGAGCAGCAGCAGCAGCCCCACAACATGGC...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373827.6
CDS-3UTR CCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACAGACCCCACACCTGGCTaGAGAGGGCAGGGACAACTT +
Preference number: 4 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTDPTPG*RGQGQL
Trigger: AAGTTGTCCCTGCCCTCTCCAGCCAGGTGTGGGGTC...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CAA 72 bp AGCTCCGTCTTGTACCAGATACCGCACAACTTCAGCTaGGCCGGAGCGAGCTGCCATGTGCAGTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SSVLYQIPHNFS*AGASCHVQCCF
Trigger: GAAACAGCACTGCACATGGCAGCTCGCTCCGGCCAAGCTGAAGTTGTGCGGTATCTGGTACAAGACGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 72 bp CTCGGGCGGAAAGGTGAAGTGGGGTGTACCCAGAAGTaGTGGCTGCATTTGGAGATGCCCCTTGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: LGRKGEVGCTQK*WLHLEMPLAAT
Trigger: TGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTTTCCGCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 72 bp AGACGCAGATTGGGTGTAGTGTCCCCTTTGTATCCATaGGATACACCTTCTCCTGAGGGCGGGGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: RRRLGVVSPLYP*DTPSPEGGGTG
Trigger: TCCGGTGCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACCCAATCTGCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACTCCACGTGCCCTTCCTaGGCTGCGAGATGGACGGAA +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHSTCPS*AARWTE
Trigger: TTCCGTCCATCTCGCAGCTCAGGAAGGGCACGTGGA...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCTGCATTTGGAGATGCCCCTTGCTGCAACAGCTGTTGTACTATGTCTGCTTTCCAGGGTGTCCACTACTaGGATGTAGCCGAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: AAFGDAPCCNSCCTMSAFQGVHY*DVAEAP
Trigger: CGGCGCCTCGGCTACATCTCAGTAGTGGACACCCTG...GAAAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp AGGCGCCGGGCAATGCCAAGGGCAGTATTCCCATTCACAGTGAGTTCATTGGGGTCTGGGAAAGATGCTTaGACAAGGGGCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RRRAMPRAVFPFTVSSLGSGKDA*TRGTVV
Trigger: CACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAGA...CCCCAATGAACTCACTGTGAATGGGAATACTGCCCTTGGCATTGCCCGGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACACTCCTCCTGGAAGGCTaGTCAAGCAATCCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTLLLEG*SSNPPG
Trigger: TCCAGGCGGATTGCTTGATCAGCCTTCCAGGAGGAG...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GAAGGCTGGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTGTGGCATCCGTGTCATaGGAAAACTCTGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: EGWPPREVSDNDVFLEVLVASVS*ENSAVV
Trigger: CACCACAGCAGAGTTTTCTCATGACACGGATGCCAC...AAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGTTGGCCGGAGCGAGCTaGCATGTGCAGTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRLAGAS*HVQCCF
Trigger: GAAACAGCACTGCACATGGCAGCTCGCTCCGGCCAA...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGCCTTCTCCCTGCTTTTaGTCAGACCCACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRPSPCF*SDPLDP
Trigger: GGGGTCCAGTGGGTCTGAGCAAAAGCAGGGAGAAGG...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp TCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTGCCACATAGGCAAAGCAGCCGCTaGTTAAACCCAGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLSGRPHEPLGLRGLLPHRQSSR*LNPAPA
Trigger: AGCAGGGGCTGGGTTTAAGCAGCGGCTGCTTTGCCT...ATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGTCTACCACCTGCTCGTaGCCACTCCTTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRSTTCS*PLLAPQ
Trigger: CTGTGGAGCAAGGAGTGGCCACGAGCAGGTGGTAGA...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGTCCTCTGGTTGGGTCTaGGGAACATCCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRSSGWV*GTSPAE
Trigger: CTCAGCTGGGGATGTTCCCCAGACCCAACCAGAGGA...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AGACTTCGTTGTAACCGAAGGCTGGCCACCCCGGGAAGTCTCGGACAACGACGTAGAAACCTCGGGAATTaGGCTGGGTTTGCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: RLRCNRRLATPGSLGQRRRNLGN*AGFAWY
Trigger: ATACCAGGCAAACCCAGCCCAATTCCCGAGGTTTCT...ACGTCGTTGTCCGAGACTTCCCGGGGTGGCCAGCCTTCGGTTACAACGAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACGTTGTAACCGAAGGCTaGCCACCCCGGGAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHVVTEG*PPREVS
Trigger: CGAGACTTCCCGGGGTGGCCAGCCTTCGGTTACAAC...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CAA 72 bp GGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTaGAGGTACTTTCTTCCTCATCGGACAACTCGGACT +
Preference number: 4 (lower is better)
Translates to: GHPGKSRTTTCF*RYFLPHRTTRT
Trigger: AGTCCGAGTTGTCCGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp CTGGGAAAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTTTTCGGGCCGCGATATaGAGAGCTGGGAGACGCACT +
Preference number: 4 (lower is better)
Translates to: LGKMLEQGALWCCSEFHLFRAAI*RAGRRT
Trigger: AGTGCGTCTCCCAGCTCTTCATATCGCGGCCCGAAA...AAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CCTATCCGAACTTATCTTGGGACTGGCAGAACGCGCTCCGAGACTAAAGCCCATTGTCATTCCTTGCGGTaGAATCCACAGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PIRTYLGTGRTRSETKAHCHSLR*NPQQPL
Trigger: GAGCGGCTGCTGTGGATTTCACCGCAAGGAATGACA...ATGGGCTTTAGTCTCGGAGCGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTTTTCTCACTGCCGCTGTTCCTCCTCCTCTaGCTCCTCAGAAACCTCGGG +
Preference number: 4 (lower is better)
Translates to: LISVRSHGLCGLLLFSLPLFLLL*LLRNLG
Trigger: CCCGAGGTTTCTGAGGAGTCAGAGGAGGAGGAACAG...CGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp CATTCGCATTTCTACCGAGGAGCAGCGACACCATGTCCACGTGCCCTTCCTGAGGGAGATGCCCCTTGCTaGAACAGCTGTTGTACTATG +
Preference number: 4 (lower is better)
Translates to: HSHFYRGAATPCPRALPEGDAPC*NSCCTM
Trigger: CATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCC...CTCAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTCGGTAGAAATGCGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CATGATCCAAAAGGAACGCGGCCACATCCTCATGCCCCTCTCGGGCGGAAAGGTTTTGGAGATGCCCCTTaGTGCAACAGCTGTTGTACT +
Preference number: 4 (lower is better)
Translates to: HDPKGTRPHPHAPLGRKGFGDAP*CNSCCT
Trigger: AGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAA...ACCTTTCCGCCCGAGAGGGGCATGAGGATGTGGCCGCGTTCCTTTTGGATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp TCGGGCGGAAAGGTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGAACGGAAGCAATTCCTTaGCGGGTAACTGCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SGGKVKWGVPRSCGCIWRTEAIP*RVTALA
Trigger: TGCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGT...TCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTTTCCGCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CCTATCCGAACTTATCTTGGGACTGGCAGAACGCGCTCCGAGACTAAAGCCCATGGGGCACTGTGGTGCTaGTCAGAATTCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: PIRTYLGTGRTRSETKAHGALWC*SEFHLQ
Trigger: CTGAAGGTGGAATTCTGAGCAGCACCACAGTGCCCC...ATGGGCTTTAGTCTCGGAGCGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp CCTATCCGAACTTATCTTGGGACTGGCAGAACGCGCTCCGAGACTAAAGCCCATTGCTCCACAGTGCAGTaGTGTCAGACCATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PIRTYLGTGRTRSETKAHCSTVQ*CQTIPG
Trigger: ACCAGGGATGGTCTGACACCACTGCACTGTGGAGCA...ATGGGCTTTAGTCTCGGAGCGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TTCCTGAGCTGCGAGATGGACGGAAGCAATTCCTTGCCGGGTAACTGCGTTGGCTGTACCCAGAAGTTGTaGCTGCATTTGGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: FLSCEMDGSNSLPGNCVGCTQKL*LHLEMP
Trigger: GGGCATCTCCAAATGCAGCCACAACTTCTGGGTACA...GCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACACAGGCTCCTCTGGTTaGGTCTGGGGAACATCCCCA +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHTGSSG*VWGTSP
Trigger: TGGGGATGTTCCCCAGACCCAACCAGAGGAGCCTGT...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACGACCTGCCAGTTCTTTaGAAGGATCCCGCCCGGACT +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHDLPVL*KDPART
Trigger: AGTCCGGGCGGGATCCTTCCAAAGAACTGGCAGGTC...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
3UTR CAA 72 bp GGCTGGAGAGGGCAGGGACAACTTGGCTCTAGCAGGTaGTTACCTTCTGGGAATGAGGTCCATTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GWRGQGQLGSSR*LPSGNEVHCCQ
Trigger: TTGGCAACAATGGACCTCATTCCCAGAAGGTAACAACCTGCTAGAGCCAAGTTGTCCCTGCCCTCTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TCGGGCGGAAAGGTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGATGGACGCAGTTTAAATaGTCCCCTTGTGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: SGGKVKWGVPRSCGCIWRWTQFK*SPCVAM
Trigger: CATGGCCACACAAGGGGATCATTTAAACTGCGTCCA...TCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTTTCCGCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACAGATAAAGACGCTCCATaGTCCAAAAGGAACGCGGCC +
Preference number: 4 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTDKDAP*SKRNAA
Trigger: GGCCGCGTTCCTTTTGGATCATGGAGCGTCTTTATC...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp TTAAGGTCCTGTGGCCCAAGATATTTGTCTGTGTCCCCGGTCATTGCATCTTCAGTCTGGGCGTCCACATaGGCCCCTTGGTTTACGAGG +
Preference number: 4 (lower is better)
Translates to: LRSCGPRYLSVSPVIASSVWAST*APWFTR
Trigger: CCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGAC...TGAAGATGCAATGACCGGGGACACAGACAAATATCTTGGGCCACAGGACCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTTCTTCCTCATCGAGATTCGTCATCGCTTaGATCACTGACGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PREVSDNDVFLEVLSSSSRFVIA*ITDVCP
Trigger: GGGGCAGACGTCAGTGATTCAAGCGATGACGAATCT...CGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACATCCTTGCCGGGTAACTaGGTTGGCATCAGCACCATA +
Preference number: 4 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTSLPGN*VGISTI
Trigger: TATGGTGCTGATGCCAACGCAGTTACCCGGCAAGGA...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGGGTCCATCTGCGGAATaGTCTATGTTCCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRGPSAE*SMFPWE
Trigger: TTCCCAGGGGAACATAGAGCATTCCGCAGATGGACC...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCGAGCGGAGTCCTCGGTaGCCGCGGGAGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFERSPR*PRERRR
Trigger: CCTCCTCCTCTCCCGCGGGCACCGAGGACTCCGCTC...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373827.6
CDS-3UTR GCA 90 bp CCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTTCTTCCTCATCGATGGACTCTGTGGACTaGTCCTTTTCTCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: PREVSDNDVFLEVLSSSSMDSVD*SFSHCR
Trigger: CCGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCCAT...CGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp AGGCGCCGGGCAATGCCAAGGGCAGTATTCCCATTCACAGTGAGTTCATTGGGGTGTGTCCCCGGTCATTaGATCTTCACCTTCATCATC +
Preference number: 4 (lower is better)
Translates to: RRRAMPRAVFPFTVSSLGCVPGH*IFTFII
Trigger: GATGATGAAGGTGAAGATGCAATGACCGGGGACACA...CCCCAATGAACTCACTGTGAATGGGAATACTGCCCTTGGCATTGCCCGGCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TCGGGCGGAAAGGTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGACAAAGCCACTGCCAATaGTGTGAAGCCATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SGGKVKWGVPRSCGCIWRQSHCQ*CEAILC
Trigger: ACAGAGGATGGCTTCACACCATTGGCAGTGGCTTTG...TCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTTTCCGCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TCTTTGCGGCTGCGTGAGGTGAGGCTCCTTGGTCCAAAAGCAGAAGGGCCACTTCGGTTACAGCTTGGATaGATGCACCGTGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: SLRLREVRLLGPKAEGPLRLQLG*MHRVSE
Trigger: TTCTGAAACACGGTGCATCCATCCAAGCTGTAACCG...AAGTGGCCCTTCTGCTTTTGGACCAAGGAGCCTCACCTCACGCAGCCGCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TCGGGCGGAAAGGTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGAAGTCGGGCTGAAATGTaGAGTGGTGTTTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: SGGKVKWGVPRSCGCIWRSRAEM*SGVWSS
Trigger: GGATGACCAAACACCACTCCACATTTCAGCCCGACT...TCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACCTTTCCGCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GGACTCTGTGGACTGCTCCTTTTCTCACTGCCGGCCTTTTCACTCTTTGATTTTGTTGTAACCGAAGGCTaGCCACCCCGGGAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: GLCGLLLFSLPAFSLFDFVVTEG*PPREVS
Trigger: CGAGACTTCCCGGGGTGGCCAGCCTTCGGTTACAAC...AAAATCAAAGAGTGAAAAGGCCGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000621739.1
3UTR CAA 72 bp GGTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTaGGAGATGCCCCTTGCTGCAACAGCTGTTGTACTA +
Preference number: 4 (lower is better)
Translates to: GEVGCTQKLWLH*EMPLAATAVVL
Trigger: TAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 72 bp AGATGGACGGAAGCAATTCCTTGCCGGGTAACTGCGTaGGCATCAGCACCATATTCCAGCAGAGTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: RWTEAIPCRVTA*ASAPYSSRVVA
Trigger: AGCGACAACTCTGCTGGAATATGGTGCTGATGCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 72 bp GTTTACGAGGACTTCTGCCACATTCACTCGATCTTCTaGAGCAGCCAAATGGAGTGGGGTCAGGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: VYEDFCHIHSIF*SSQMEWGQAAL
Trigger: AAGAGCGGCCTGACCCCACTCCATTTGGCTGCTCAAGAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 72 bp GTATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTaGGTTTACGAGGACTTCTGCCACATTCACTCGATC +
Preference number: 4 (lower is better)
Translates to: VSHLCLGVHMSP*VYEDFCHIHSI
Trigger: GATCGAGTGAATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp AGGCGCCGGGCAATGCCAAGGGCAGTATTCCCATTCACAGTGAGTTCATTGGGGGGCGTGAAACCATTCTaGGATTGTGCATTGACATTG +
Preference number: 4 (lower is better)
Translates to: RRRAMPRAVFPFTVSSLGGVKPF*DCALTL
Trigger: CAATGTCAATGCACAATCTCAGAATGGTTTCACGCC...CCCCAATGAACTCACTGTGAATGGGAATACTGCCCTTGGCATTGCCCGGCGCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGGAAACGACTTGGTCGTaGCCTTGTTGCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRETTWS*PCCKAT
Trigger: AGTGGCTTTGCAACAAGGTCACGACCAAGTCGTTTC...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGTTCTTTGCGGCTGCGTaGGGTGAGGCTCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMFFAAA*GEAPWS
Trigger: GGACCAAGGAGCCTCACCTCACGCAGCCGCAAAGAA...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGTTCACTCGATCTTCTTaGGCAGCCAAATGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRFTRSS*AAKWSG
Trigger: CCCACTCCATTTGGCTGCTCAAGAAGATCGAGTGAA...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGTTCACTCGATCTTCTTaGGCAGCCAAATGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLFTRSS*AAKWSG
Trigger: CCCACTCCATTTGGCTGCTCAAGAAGATCGAGTGAA...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACTCTGGGAAAGATGCTTaGACAAGGGGCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHSGKDA*TRGTVV
Trigger: CACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAGA...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTGGATACACCTTCTCCTaGGGGCGGGGGCACCGGAAT +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIGYTFS*GRGHRN
Trigger: ATTCCGGTGCCCCCGCCCTCAGGAGAAGGTGTATCC...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAGTGATGTCTTCCCACTaGGCAGGCGAAGTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTVMSSH*AGEVPP
Trigger: AGGGGGCACTTCGCCTGCTCAGTGGGAAGACATCAC...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGGAGATGAAGTTCGACTaGAGTGAGGCTGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSREMKFD*SEAEDV
Trigger: CACATCCTCAGCCTCACTTCAGTCGAACTTCATCTC...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TCGGACAACGACGTGTTTCTTGAGGTACTTTCTTCCTCATCGGACAACTCGGACCTGCTTAAGGGAGGTTaGCTTGGCCTGTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SDNDVFLEVLSSSSDNSDLLKGG*LGLFLL
Trigger: GAGGAGGAACAGGCCAAGTCAACCTCCCTTAAGCAG...GTCCGAGTTGTCCGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGCAACTAAGTCCCAGGTaGTCGGCTACTATTGCCATC +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRQLSPR*SATIAI
Trigger: GATGGCAATAGTAGCCGATCACCTGGGACTTAGTTG...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp TCTTTGCGGCTGCGTGAGGTGAGGCTCCTTGGTCCAAAAGCAGAAGGGCCACTTGCCAAAGATGCGATGTaGAATGCTGTGTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SLRLREVRLLGPKAEGPLAKDAM*NAVFPF
Trigger: GAAAGGAAACACAGCATTGCACATCGCATCTTTGGC...AAGTGGCCCTTCTGCTTTTGGACCAAGGAGCCTCACCTCACGCAGCCGCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGCGAGGCGCCGGGCAATaGCAAGGGCAGTATTCCCAT +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMRGAGQ*QGQYSH
Trigger: ATGGGAATACTGCCCTTGGCATTGCCCGGCGCCTCG...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TTCCTGAGCTGCGAGATGGACGGAAGCAATTCCTTGCCGGGTAACTGCGTTGGCAATCCGGGAAACCACTaGAAAATACTGGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: FLSCEMDGSNSLPGNCVGNPGNH*KILGEI
Trigger: GATTTCCCCCAGTATTTTGCAGTGGTTTCCCGGATT...GCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGTCCATCTCGCAGCTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp TGGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTTCTTCCCAGCTGGCTTCAGAATaGCCTCTGTGTTCCAGATAT +
Preference number: 4 (lower is better)
Translates to: WPPREVSDNDVFLEVLSSQLASE*PLCSRY
Trigger: ATATCTGGAACACAGAGGGCATTCTGAAGCCAGCTG...GGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp GCTGCATTTGGAGATGCCCCTTGCTGCAACAGCTGTTGTACTATGTCTGCTTTCAAGTCCATTTACGGGTaGTCCCCAGGCAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AAFGDAPCCNSCCTMSAFKSIYG*SPGKAA
Trigger: GGCTGCTTTGCCTGGGGAGCACCCGTAAATGGACTT...GAAAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACAGACTCGGTTACAGCTTaGATGGATGCACCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTDSVTA*MDAPCF
Trigger: GAAACACGGTGCATCCATCCAAGCTGTAACCGAGTC...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp CTCTGCAGGCAGGGAATCATCACCCAATTCCTTAAGGTCCTGTGGCCCAAGATAAGCAGCCAAATGGAGTaGGGTCAGGCCGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: LCRQGIITQFLKVLWPKISSQME*GQAALI
Trigger: AATAAGAGCGGCCTGACCCCACTCCATTTGGCTGCT...TATCTTGGGCCACAGGACCTTAAGGAATTGGGTGATGATTCCCTGCCTGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp CATGATCCAAAAGGAACGCGGCCACATCCTCATGCCCCTCTCGGGCGGAAAGGTTTAGATGCTGCTCTTTaGATGGCACAAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: HDPKGTRPHPHAPLGRKGLDAAL*MAQGVL
Trigger: AAGAACTCCTTGTGCCATCCAAAGAGCAGCATCTAA...ACCTTTCCGCCCGAGAGGGGCATGAGGATGTGGCCGCGTTCCTTTTGGATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACAAGCAATCCGCCTGGATaGTCCCCTTCTTTCACAACA +
Preference number: 4 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTSNPPG*SPSFTT
Trigger: TGTTGTGAAAGAAGGGGACCATCCAGGCGGATTGCT...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TGGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTTCTTCCAATCAGGAGATTTGGTaGGGGAGGTTTCGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: WPPREVSDNDVFLEVLSSNQEIW*GRFRFP
Trigger: AGGAAACCGAAACCTCCCCCACCAAATCTCCTGATT...GGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp TGTTTTCTTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTGGCCACCCCGGGAGTCCGCATCCAGTGGTaGAGGAGGGGGAAATTCAAT +
Preference number: 4 (lower is better)
Translates to: CFLISSRLRCNRRLATPGVRIQW*RRGKFN
Trigger: ATTGAATTTCCCCCTCCTCCACCACTGGATGCGGAC...TCCCGGGGTGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAAGAAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTTTTCTCACTCTGGTCCGCATCCAGTaGTGGAGGAGGGGGAAATTC +
Preference number: 4 (lower is better)
Translates to: HPDICPFTWTLWTAPFLTLVRIQ*WRRGKF
Trigger: GAATTTCCCCCTCCTCCACCACTGGATGCGGACCAG...AGTGAGAAAAGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp GCTGCCTCTGTTTTCTTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTGGCCAATCAGGGGTTGTTGCTaGAGAGCGGTCTTCTACCGC +
Preference number: 4 (lower is better)
Translates to: AASVFLSLADFVVTEGWPIRGCC*RAVFYR
Trigger: GCGGTAGAAGACCGCTCTCCAGCAACAACCCCTGAT...TGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAAGAAAACAGAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTTCTTCCTCATCGGGTACTTTCATCAGTTaGCGTTCTGGCTGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: PREVSDNDVFLEVLSSSSGTFIS*RSGWRC
Trigger: ACAACGCCAGCCAGAACGCCAACTGATGAAAGTACC...CGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGTTTGCTCAGACCCACTaGACCCCTCTTCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRFAQTH*TPLLHG
Trigger: TCCATGAAGAAGAGGGGTCCAGTGGGTCTGAGCAAA...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATGTAGACCCCACACCTaGCTGGAGAGGGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTCRPHT*LERAGT
Trigger: TGTCCCTGCCCTCTCCAGCCAGGTGTGGGGTCTACA...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGTTCTGCAGTTACGACTaGAGGTCCATCTGCGGAATG +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRFCSYD*RSICGM
Trigger: CATTCCGCAGATGGACCTCCAGTCGTAACTGCAGAA...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp AAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTCAGGACGAAACGACTTGGTCGTaGCCTTGTTGCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: KMLEQGALWCCSEFHLQDETTWS*PCCKAT
Trigger: AGTGGCTTTGCAACAAGGTCACGACCAAGTCGTTTC...GTCCTGAAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCGGGCCGCGATATaGAGAGCTGGGAGACGCACT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTFRAAI*RAGRRT
Trigger: AGTGCGTCTCCCAGCTCTTCATATCGCGGCCCGAAA...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACCTATGTGGAGCGGAGTaGAGCCACTCTTTGATTCCA +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHLCGAE*SHSLIP
Trigger: TGGAATCAAAGAGTGGCTTCACTCCGCTCCACATAG...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CTCTGCAGGCAGGGAATCATCACCCAATTCCTTAAGGTCCTGTGGCCCAAGATATATTCCCATTCACAGTaGGTTCATTGGGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: LCRQGIITQFLKVLWPKIYSHSQ*VHWGRR
Trigger: ACGCCTCCCCCAATGAACTCACTGTGAATGGGAATA...TATCTTGGGCCACAGGACCTTAAGGAATTGGGTGATGATTCCCTGCCTGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGGGATACACCTTCTCCTaGGGGCGGGGGCACCGGAAT +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVGYTFS*GRGHRN
Trigger: ATTCCGGTGCCCCCGCCCTCAGGAGAAGGTGTATCC...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTGTGATGTCTTCCCACTaGGCAGGCGAAGTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIVMSSH*AGEVPP
Trigger: AGGGGGCACTTCGCCTGCTCAGTGGGAAGACATCAC...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp TGGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTTCTTCCATGATGCTTCTTATCTaGCTCAATCTGGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: WPPREVSDNDVFLEVLSSMMLLI*LNLVRI
Trigger: GATGCGGACCAGATTGAGTCAGATAAGAAGCATCAT...GGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGCATCGCTTGAATCACTaGCGTCTGCCCCGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMHRLNH*RLPREE
Trigger: TTCCTCCCGGGGCAGACGTCAGTGATTCAAGCGATG...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TGTTTTCTTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTGGCCACCCCGGGACAATGGAACACTCTGTaGTGGACTGGTCGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: CFLISSRLRCNRRLATPGQWNTL*WTGRCS
Trigger: GGAACAACGACCAGTCCATCACAGAGTGTTCCATTG...TCCCGGGGTGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAAGAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp TCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTGCCACATACATTGGCTTCTCTCTaGAGCAGCTCAGAAACAACC +
Preference number: 4 (lower is better)
Translates to: SLSGRPHEPLGLRGLLPHTLASL*SSSETT
Trigger: GGTTGTTTCTGAGCTGCTGCAGAGAGAAGCCAATGT...ATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp GTGTGTATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGATTGCCCAGCCAAAGATaGGATGTGCAATGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: VCIPSLSGRPHEPLGLRGLPSQR*DVQCCV
Trigger: AACACAGCATTGCACATCGCATCTTTGGCTGGGCAA...TCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGATACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CATGATCCAAAAGGAACGCGGCCACATCCTCATGCCCCTCTCGGGCGGAAAGGTTTTGGCATTAACTTTTaGAGAATGCTGGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HDPKGTRPHPHAPLGRKGFGINF*RMLEQE
Trigger: TTCCTGCTCCAGCATTCTGCAAAAGTTAATGCCAAA...ACCTTTCCGCCCGAGAGGGGCATGAGGATGTGGCCGCGTTCCTTTTGGATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CTCAGATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCAGCCCATGTAACCCTCTaGAGGCAGGGAATCATCACC +
Preference number: 4 (lower is better)
Translates to: LRLVLPVLSVSSFATVLAAHVTL*RQGIIT
Trigger: GGTGATGATTCCCTGCCTGCAGAGGGTTACATGGGC...TGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR GCA 90 bp CCTATCCGAACTTATCTTGGGACTGGCAGAACGCGCTCCGAGACTAAAGCCCATCATCATGCTGTCCCGTaGATAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: PIRTYLGTGRTRSETKAHHHAVP*IGASVQ
Trigger: TTGAACAGAAGCTCCTATGCACGGGACAGCATGATG...ATGGGCTTTAGTCTCGGAGCGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGGTTCTTCAATCATCATaGTGTCCCGTGCATAGGAGC +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRVLQSS*CPVHRS
Trigger: GCTCCTATGCACGGGACAGCATGATGATTGAAGAAC...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CACATGAGCCCCTTGGTTTACGAGGACTTCTGCCACATTCACTCGATCTTCTTGCAAGGGGCACTGTGGTaGTGCTCAGAATTCCACCTT +
Preference number: 4 (lower is better)
Translates to: HMSPLVYEDFCHIHSIFLQGALW*CSEFHL
Trigger: AAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTG...CAAGAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CATTCGCATTTCTACCGAGGAGCAGCGACACCATGTCCACGTGCCCTTCCTGAGCTTTGTCATCTGTCATaGAGAAACATCGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: HSHFYRGAATPCPRALPELCHLS*RNIARK
Trigger: CTTCCTTGCGATGTTTCTGCATGACAGATGACAAAG...CTCAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTCGGTAGAAATGCGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACACCTTCTCCCTGCTTTTaGTCAGACCCACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTPSPCF*SDPLDP
Trigger: GGGGTCCAGTGGGTCTGAGCAAAAGCAGGGAGAAGG...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp CAGGAGATTGGCGACTTCAAGCTTTCCATATTTTGCTGCCACATGAAGAGGAGTCTTAAACCCAGCCCCTaGTGCTGTCAGAGAGACGCG +
Preference number: 4 (lower is better)
Translates to: QEIGDFKLSIFCCHMKRSLKPSP*CCQRDA
Trigger: CGCGTCTCTCTGACAGCAGCAGGGGCTGGGTTTAAG...ACTCCTCTTCATGTGGCAGCAAAATATGGAAAGCTTGAAGTCGCCAATCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACACGCGATATGAAGAGCTaGGAGACGCACTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTRDMKS*ETHFSF
Trigger: AAAGGAAAAGTGCGTCTCCCAGCTCTTCATATCGCG...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTCGCACAACTTCAGCTTaGCCGGAGCGAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISRTTSA*PERAAM
Trigger: CATGGCAGCTCGCTCCGGCCAAGCTGAAGTTGTGCG...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACAGTCGGGCTGAAATGTaGAGTGGTGTTTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHSRAEM*SGVWSS
Trigger: GGATGACCAAACACCACTCCACATTTCAGCCCGACT...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGATGCCCCTTGCTGTCTGTAGCAGGAGATTaGCGACTTCAAGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VKWGVPRSCGCIWRCPLLSVAGD*RLQAFH
Trigger: ATGGAAAGCTTGAAGTCGCCAATCTCCTGCTACAGA...CAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTGCCACATGTCGCTATGTCCATCTaGTTCTTTTTGGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: SLSGRPHEPLGLRGLLPHVAMSI*FFLAAM
Trigger: CATCGCTGCCAAAAAGAACCAGATGGACATAGCGAC...ATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGGACGGCTTCCTCTCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTDGFLS*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGAGAGGAAGCCGTC...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGGACGGCTTCCTCTCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLDGFLS*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGAGAGGAAGCCGTC...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GCTGTTGTACTATGTCTGCTTTCCCCAGTCGGGCTGAAATGTGGAGTGGTGTTTGAACAAGGGGCACTGTaGTGCTGCTCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: AVVLCLLSPVGLKCGVVFEQGAL*CCSEFH
Trigger: GTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTC...AAACACCACTCCACATTTCAGCCCGACTGGGGAAAGCAGACATAGTACAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACACTCTGTACAGTTGCGTaGCTAACCCCACAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTLCTVA*LTPQFL
Trigger: TAGAAACTGTGGGGTTAGCCACGCAACTGTACAGAG...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACGAGTTCAGGTTGGAATaGCTTCTCCTCAGGCACATC +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHEFRLE*LLLRHI
Trigger: GATGTGCCTGAGGAGAAGCCATTCCAACCTGAACTC...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACTACTTGCACTCTCTCTaGCAGAGATGGAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHYLHSL*QRWRLA
Trigger: AGCCAGTCTCCATCTCTGCCAGAGAGAGTGCAAGTA...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGGTTCGCTGTTACGAGTaGCTCTTCTTTTCCACATGC +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRVRCYE*LFFSTC
Trigger: GCATGTGGAAAAGAAGAGCCACTCGTAACAGCGAAC...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp AGATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCAGCACAACAACGAAGTACCTaGCAGAACGCGCTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: RLVLPVLSVSSFATVLAAQQRST*QNALRD
Trigger: GTCTCGGAGCGCGTTCTGCCAGGTACTTCGTTGTTG...TGCTGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
3UTR CAA 72 bp GTACCCAGAAGTTGTGGCTGCATTTGGAGATGCCCCTaGCTGCAACAGCTGTTGTACTATGTCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VPRSCGCIWRCP*LQQLLYYVCFP
Trigger: GGGAAAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGCCACTGCCAATGGTGTaGAGCCATCCTCTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMPLPMV*SHPLWL
Trigger: TAGCCACAGAGGATGGCTTCACACCATTGGCAGTGG...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp CACATGAGCCCCTTGGTTTACGAGGACTTCTGCCACATTCACTCGATCTTCTTGCTATGTGGAGCGGAGTaGAGCCACTCTTTGATTCCA +
Preference number: 4 (lower is better)
Translates to: HMSPLVYEDFCHIHSIFLLCGAE*SHSLIP
Trigger: TGGAATCAAAGAGTGGCTTCACTCCGCTCCACATAG...CAAGAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACAGCAACGTGGCTACATTaGTATTTCCATAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTATWLH*YFHSEQ
Trigger: CTGCTCACTATGGAAATATCAATGTAGCCACGTTGC...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGGCAACGTGGCTACATTaGTATTTCCATAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLATWLH*YFHSEQ
Trigger: CTGCTCACTATGGAAATATCAATGTAGCCACGTTGC...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACATATTTACATGCCCCATaGAGGCAGCAACATGGATTG +
Preference number: 4 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTYLHAP*RQQHGL
Trigger: CAATCCATGTTGCTGCCTTCATGGGGCATGTAAATA...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGTTCTTTGCGGCTGCGTaGGGTGAGGCTCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVFFAAA*GEAPWS
Trigger: GGACCAAGGAGCCTCACCTCACGCAGCCGCAAAGAA...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTAAGACCTATCCGAACTaGAGGAGCGGAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISKTYPN*RSGGWQ
Trigger: CTGCCAGCCTCCGCTCCTTCAGTTCGGATAGGTCTT...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTACCAAACGGCAGGTaGTTCGAGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISLPNGR*FEWGPY
Trigger: GTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAA...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp GGTGTAGTGTCCCCTTTGTATCCATTGGATACACCTTCTCCTGAGGGCGGGGGCAAGCCAAAATCTGGCTaGAACATTGGTTGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GVVSPLYPLDTPSPEGGGKPKSG*NIGCKG
Trigger: TCCTTTACAACCAATGTTTCAGCCAGATTTTGGCTT...GCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTGGATCCCGCCCGGACTaGAAGGCCTTCATGATGTCA +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIGSRPD*KAFMMS
Trigger: TGACATCATGAAGGCCTTTCAGTCCGGGCGGGATCC...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TCGGCTACTATTGCCATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGTCTCATCAGCAACTCTaGCGGGAATGTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: SATIAILISVRSHGLCGLSHQQL*RECVTL
Trigger: CAGTGTCACACATTCCCGTCAGAGTTGCTGATGAGA...CAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTAGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp GGACTCTGTGGACTGCTCCTTTTCTCACTGCCGGCCTTTTCACTCTTTGATTTTTGGGCCCCTGACTTCTaGTCAGTCTTATCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GLCGLLLFSLPAFSLFDFWAPDF*SVLSGV
Trigger: GACTCCTGATAAGACTGATCAGAAGTCAGGGGCCCA...AAAATCAAAGAGTGAAAAGGCCGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp AGGCGCCGGGCAATGCCAAGGGCAGTATTCCCATTCACAGTGAGTTCATTGGGGAGATGCGATGTGCAATaGTGTGTTTCCTTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RRRAMPRAVFPFTVSSLGRCDVQ*CVSFLC
Trigger: ACAAAGAAAGGAAACACAGCATTGCACATCGCATCT...CCCCAATGAACTCACTGTGAATGGGAATACTGCCCTTGGCATTGCCCGGCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGGCATTGTTGTCATTCTaGAGCAGCAGGGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRALLSF*SSRAAA
Trigger: AGCCGCCGCCCTGCTGCTGCAGAATGACAACAATGC...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp AAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTCAGGACAGTGATGTCATTCCTTaGGGTGAAATCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: KMLEQGALWCCSEFHLQDSDVIP*GEIHSS
Trigger: GCTGCTGTGGATTTCACCGCAAGGAATGACATCACT...GTCCTGAAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTCTCGTGGCCACTCCTTaGTCCACAGTGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISLVATP*STVQWC
Trigger: ACACCACTGCACTGTGGAGCAAGGAGTGGCCACGAG...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TTAAGGTCCTGTGGCCCAAGATATTTGTCTGTGTCCCCGGTCATTGCATCTTCATCCACGGGTACATTATaGTGGAGGAGAAGCTGGACG +
Preference number: 4 (lower is better)
Translates to: LRSCGPRYLSVSPVIASSSTGTL*WRRSWT
Trigger: CGTCCAGCTTCTCCTCCAGCATAATGTACCCGTGGA...TGAAGATGCAATGACCGGGGACACAGACAAATATCTTGGGCCACAGGACCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp GGTGTAGTGTCCCCTTTGTATCCATTGGATACACCTTCTCCTGAGGGCGGGGGCAAGCTTTCCATATTTTaGTGCCACATGAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GVVSPLYPLDTPSPEGGGKLSIF*CHMKRS
Trigger: ACTCCTCTTCATGTGGCAGCAAAATATGGAAAGCTT...GCCCCCGCCCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGGACACTACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGACGAGGCGCCGGGCAATaGCAAGGGCAGTATTCCCAT +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRRGAGQ*QGQYSH
Trigger: ATGGGAATACTGCCCTTGGCATTGCCCGGCGCCTCG...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACTGTGTCCCCGGTCATTaGATCTTCACCTTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHCVPGH*IFTFFN
Trigger: GTTGAAGAAGGTGAAGATGCAATGACCGGGGACACA...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp ATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTGAATTCTCTGTACAGTTaGGTGGCTAACCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: IPSLSGRPHEPLGLRGLLNSLYS*VANPTV
Trigger: AACTGTGGGGTTAGCCACGCAACTGTACAGAGAATT...CAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTTTTCTCACTGCCGTCCTCCACTGTAGTCTaGTTAAGGGAGGTTGACTTG +
Preference number: 4 (lower is better)
Translates to: LISVRSHGLCGLLLFSLPSSTVV*LREVDL
Trigger: CAAGTCAACCTCCCTTAAGCAGACTACAGTGGAGGA...CGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp AGACTTCGTTGTAACCGAAGGCTGGCCACCCCGGGAAGTCTCGGACAACGACGTTTGTCATGCTCATCTTaGAGATTGACTTCAATCATG +
Preference number: 4 (lower is better)
Translates to: RLRCNRRLATPGSLGQRRLSCSS*RLTSIM
Trigger: CATGATTGAAGTCAATCTGCAAGATGAGCATGACAA...ACGTCGTTGTCCGAGACTTCCCGGGGTGGCCAGCCTTCGGTTACAACGAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp TGGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTTCTTCCAGCTGGTACTTGTCATaGTCATCTTGCAGATTGACT +
Preference number: 4 (lower is better)
Translates to: WPPREVSDNDVFLEVLSSSWYLS*SSCRLT
Trigger: AGTCAATCTGCAAGATGAGCATGACAAGTACCAGCT...GGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp GCTGTTGTACTATGTCTGCTTTCCCCAGTCGGGCTGAAATGTGGAGTGGTGTTTTCTGTGGCTAGGCTCTaGCTTGCACCATTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: AVVLCLLSPVGLKCGVVFSVARL*LAPLSR
Trigger: TCTTGACAATGGTGCAAGCCAGAGCCTAGCCACAGA...AAACACCACTCCACATTTCAGCCCGACTGGGGAAAGCAGACATAGTACAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATGCTCCACAGTGCAGTaGTGTCAGACCATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTCSTVQ*CQTIPG
Trigger: ACCAGGGATGGTCTGACACCACTGCACTGTGGAGCA...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGTGGTTTTTGAAAGAATaGGGGCAGCTCGATCAAGCA +
Preference number: 4 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLWFLKE*GQLDQA
Trigger: TGCTTGATCGAGCTGCCCCCATTCTTTCAAAAACCA...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGATGCCCCTTGCTGTATCCAAGAGAACCTTaGCAACTTTGTAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: VKWGVPRSCGCIWRCPLLYPREP*QLCNGH
Trigger: GTGGCCATTACAAAGTTGCCAAGGTTCTCTTGGATA...CAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TCTGTAGCAGGAGATTGGCGACTTCAAGCTTTCCATATTTTGCTGCCACATGAAGGCAGCAACATGGATTaGGGTAAGGCCCGACTCGGT +
Preference number: 4 (lower is better)
Translates to: SVAGDWRLQAFHILLPHEGSNMD*GKARLG
Trigger: ACCGAGTCGGGCCTTACCCCAATCCATGTTGCTGCC...TTCATGTGGCAGCAAAATATGGAAAGCTTGAAGTCGCCAATCTCCTGCTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGATGCCCCTTGCTGATGTGGAGTGGTGTTTaGTCATCCTTAGCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: VKWGVPRSCGCIWRCPLLMWSGV*SSLALA
Trigger: AGCTAAAGCTAAGGATGACCAAACACCACTCCACAT...CAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GCTGTTGTACTATGTCTGCTTTCCCCAGTCGGGCTGAAATGTGGAGTGGTGTTTGGCAGCGATGTGCAGTaGCGTATAACCATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: AVVLCLLSPVGLKCGVVFGSDVQ*RITILC
Trigger: GCAAAGAATGGTTATACGCCACTGCACATCGCTGCC...AAACACCACTCCACATTTCAGCCCGACTGGGGAAAGCAGACATAGTACAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GCTGTTGTACTATGTCTGCTTTCCCCAGTCGGGCTGAAATGTGGAGTGGTGTTTGCAGCCCACATGCAGTaGTGTGTATCCCATCTTTGT +
Preference number: 4 (lower is better)
Translates to: AVVLCLLSPVGLKCGVVFAAHMQ*CVSHLC
Trigger: ACAAAGATGGGATACACACCACTGCATGTGGGCTGC...AAACACCACTCCACATTTCAGCCCGACTGGGGAAAGCAGACATAGTACAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp GTGAAGTGGGGTGTACCCAGAAGTTGTGGCTGCATTTGGAGATGCCCCTTGCTGTCTCTTTTCCTCTCATaGACCCAAAGTGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: VKWGVPRSCGCIWRCPLLSLFLS*TQSEGF
Trigger: AAATCCCTCACTTTGGGTCCATGAGAGGAAAAGAGA...CAGCAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGGTACACCCCACTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACACCTTCAGGACCAATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATTGGTCCTGAAGG...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TCTGTAGCAGGAGATTGGCGACTTCAAGCTTTCCATATTTTGCTGCCACATGAAGGAACAGGCTGGGCCTaGAGGCCCACTCGAATTCTT +
Preference number: 4 (lower is better)
Translates to: SVAGDWRLQAFHILLPHEGTGWA*RPTRIL
Trigger: AAGAATTCGAGTGGGCCTCCAGGCCCAGCCTGTTCC...TTCATGTGGCAGCAAAATATGGAAAGCTTGAAGTCGCCAATCTCCTGCTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGATCATCTGGAACAGGCTaGGCCTGGAGGCCCACTCGA +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRSSGTG*AWRPTR
Trigger: TCGAGTGGGCCTCCAGGCCCAGCCTGTTCCAGATGA...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp CTCTGCAGGCAGGGAATCATCACCCAATTCCTTAAGGTCCTGTGGCCCAAGATACCCCTTTGTATCCATTaGATACACCTTCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LCRQGIITQFLKVLWPKIPLCIH*IHLLLR
Trigger: CCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGG...TATCTTGGGCCACAGGACCTTAAGGAATTGGGTGATGATTCCCTGCCTGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp AACGACGTGTTTCTTGAGGTACTTTCTTCCTCATCGGACAACTCGGACTGCATCAGCTCTCGCTCCTCCTaGAAGGCTGATCAAGCAATC +
Preference number: 4 (lower is better)
Translates to: NDVFLEVLSSSSDNSDCISSRSS*KADQAI
Trigger: GATTGCTTGATCAGCCTTCCAGGAGGAGCGAGAGCT...GATGCAGTCCGAGTTGTCCGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp TACTATTGCCATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTAGTTGGCGTTCTGGCTaGCGTTGTATCAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: YYCHPDICPFTWTLWTAPSWRSG*RCIRGC
Trigger: ACAACCCCTGATACAACGCCAGCCAGAACGCCAACT...AGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACACATCAGTTGGCGTTCTaGCTGGCGTTGTATCAGGGG +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTHQLAF*LALYQG
Trigger: CCCCTGATACAACGCCAGCCAGAACGCCAACTGATG...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACATCTCTGTGGTACAAGTaGGTGCAGAATGTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTSLWYK*VQNVLS
Trigger: TGACAGAACATTCTGCACCCACTTGTACCACAGAGA...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCGATCCAAAGCCACCCTaGGCAGGAGCGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFDPKPP*AGAESS
Trigger: CGAGGACTCCGCTCCTGCCCAGGGTGGCTTTGGATC...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373827.6
CDS-3UTR TCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGCCATATACAATGGCGTaGAACCATTCTGAGATTGTG +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRPYTMA*NHSEIV
Trigger: CACAATCTCAGAATGGTTTCACGCCATTGTATATGG...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCCACTGCCAATGGTGTaGAGCCATCCTCTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLPLPMV*SHPLWL
Trigger: TAGCCACAGAGGATGGCTTCACACCATTGGCAGTGG...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGTTTCGGGCCGCGATATaGAGAGCTGGGAGACGCACT +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVFRAAI*RAGRRT
Trigger: AGTGCGTCTCCCAGCTCTTCATATCGCGGCCCGAAA...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGAGTGAAGCCACTCTTTaGTTCCACATCTGCATTGTT +
Preference number: 4 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLSEATL*FHICIV
Trigger: AACAATGCAGATGTGGAATCAAAGAGTGGCTTCACT...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGTGTCATTCCTTGCGGTaGAATCCACAGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLCHSLR*NPQQPL
Trigger: GAGCGGCTGCTGTGGATTTCACCGCAAGGAATGACA...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATGTCTGGGCGTCCACATaGGCCCCTTGGTTTACGAGG +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNVWAST*APWFTR
Trigger: CCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGAC...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp AGCTTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACCCCTGCTGTGCTGCTTaGTGTAATGGCGTATACCCA +
Preference number: 4 (lower is better)
Translates to: SFCSRCKTYPNLSWDWQNPCCAA*CNGVYP
Trigger: TGGGTATACGCCATTACATCAAGCAGCACAGCAGGG...GTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTTACCAAACGGCAGGTaGTTCGAGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLLPNGR*FEWGPY
Trigger: GTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAA...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGTTACCAAACGGCAGGTaGTTCGAGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTLPNGR*FEWGPY
Trigger: GTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAA...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAGGATACACCTTCTCCTaGGGGCGGGGGCACCGGAAT +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQGYTFS*GRGHRN
Trigger: ATTCCGGTGCCCCCGCCCTCAGGAGAAGGTGTATCC...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp TACTATTGCCATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTGAAGAACTGGGCCCCTaGCTTCTGATCAGTCTTATC +
Preference number: 4 (lower is better)
Translates to: YYCHPDICPFTWTLWTAPEELGP*LLISLI
Trigger: GATAAGACTGATCAGAAGTCAGGGGCCCAGTTCTTC...AGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp GAAGGCTGGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTAGTTTCATCTTCCCGTaGTTTACTGTCAAAAACTTC +
Preference number: 4 (lower is better)
Translates to: EGWPPREVSDNDVFLEVLSFIFP*FTVKNF
Trigger: GAAGTTTTTGACAGTAAATCACGGGAAGATGAAACT...AAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCAGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTGTTAGTGGCTGCTGCTaGTTTCTCCAGGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISVSGCC*FLQGAT
Trigger: AGTGGCTCCCTGGAGAAATCAGCAGCAGCCACTAAC...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACACCTCCTCTTCTAGGGTaGAGTCACTTGAGACCCCTA +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTPPLLG*SHLRPL
Trigger: TAGGGGTCTCAAGTGACTTCACCCTAGAAGAGGAGG...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp CTGGGAAAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTGTGATTTTCCTGGGCTaGCATATACAATGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: LGKMLEQGALWCCSEFHLVIFLG*HIQWRE
Trigger: TTCACGCCATTGTATATGGCAGCCCAGGAAAATCAC...AAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATCCACGGGTACATTATaGTGGAGGAGAAGCTGGACG +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTSTGTL*WRRSWT
Trigger: CGTCCAGCTTCTCCTCCAGCATAATGTACCCGTGGA...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CACATGAGCCCCTTGGTTTACGAGGACTTCTGCCACATTCACTCGATCTTCTTGTACAGCTTGGATGGATaGACCGTGTTTCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: HMSPLVYEDFCHIHSIFLYSLDG*TVFQKE
Trigger: CTCCTTCTGAAACACGGTGCATCCATCCAAGCTGTA...CAAGAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTGGCTGCATTTGGAGATaGCCCTTGCTGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIGCIWR*PLLQQL
Trigger: CAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCC...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGCGGCCACATCCTCATaGCCCTCTCGGGCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYAATSS*PSRAER
Trigger: CCTTTCCGCCCGAGAGGGGCATGAGGATGTGGCCGC...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp AGAATGGTTACAAATGATTGGCTTACTGAAAGGTGTCTACATCTTATAGCCAGTGCGGCCACATCCTCATaGCCCTCTCGGGCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RMVTNDWLTERCLHLIASAATSS*PSRAER
Trigger: CCTTTCCGCCCGAGAGGGGCATGAGGATGTGGCCGC...ACTGGCTATAAGATGTAGACACCTTTCAGTAAGCCAATCATTTGTAACCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp GCTGCATTTGGAGATGCCCCTTGCTGCAACAGCTGTTGTACTATGTCTGCTTTCTCAGGCCGCTCTTATTaGTCAGGTTCACATTCGCAT +
Preference number: 4 (lower is better)
Translates to: AAFGDAPCCNSCCTMSAFSGRSY*SGSHSH
Trigger: ATGCGAATGTGAACCTGAGCAATAAGAGCGGCCTGA...GAAAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACAAGGGATGTATAGAGTaGACTTGCGGAAGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHKGCIE*TCGRSS
Trigger: AGAACTCCTTCCGCAAGTGCACTCTATACATCCCTT...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGCTGGGCAGACTGGGTaGCTTCTCCTCGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYAGQTG*LLLGLG
Trigger: CCCAAGGCCGAGGAGAAGGCACCCAGTCTGCCCAGC...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp GAAGGCTGGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTTCGTTGCTTTGGGCATaGTCATCTTTGGTTTTTAAT +
Preference number: 4 (lower is better)
Translates to: EGWPPREVSDNDVFLEVLSLLWA*SSLVFN
Trigger: ATTAAAAACCAAAGATGAGCATGCCCAAAGCAACGA...AAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCAGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp CATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTTTTCTCACTTGTATCAGGGGTTGTTaGTGGAGAGCGGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: HPDICPFTWTLWTAPFLTCIRGC*WRAVFY
Trigger: GTAGAAGACCGCTCTCCAGCAACAACCCCTGATACA...AGTGAGAAAAGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp GCTGCCTCTGTTTTCTTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTGGCCAGTGATCGGCTACTATTaGCATCCTGATATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: AASVFLSLADFVVTEGWPVIGYY*HPDICP
Trigger: CGGACAGATATCAGGATGGCAATAGTAGCCGATCAC...TGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAAGAAAACAGAGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGAGAAGCAGTGTGATATaGCTGGGAAATTACACACCT +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRRSSVI*LGNYTP
Trigger: AGGTGTGTAATTTCCCAGGCATATCACACTGCTTCT...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CTCAGATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCAGTCAGTGAGCTCTTTTaGTACTGTGCTGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: LRLVLPVLSVSSFATVLAVSELF*YCAGSM
Trigger: CATGCTGCCAGCACAGTAGCAAAAGAGCTCACTGAC...TGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR GCA 90 bp ATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCAGCATGGTCAGTGAGCTCTTTTaGTACTGTGCTGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: IGSPSFVSELFCYCAGSMVSELF*YCAGSM
Trigger: CATGCTGCCAGCACAGTAGCAAAAGAGCTCACTGAC...CATGCTGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCCGCACAACTTCAGCTTaGCCGGAGCGAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFRTTSA*PERAAM
Trigger: CATGGCAGCTCGCTCCGGCCAAGCTGAAGTTGTGCG...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGGACGGCTTCCTCTCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VNFYFLLTFLPRISQYWQDGFLS*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGAGAGGAAGCCGTC...CTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp ACAGTTGCGTGGCTAACCCCACAGTTTCTAAAACTTGATGGCAGTCTGCAAGCCTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TVAWLTPQFLKLDGSLQAFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...GGCTTGCAGACTGCCATCAAGTTTTAGAAACTGTGGGGTTAGCCACGCAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGGAACAAGGGGCACTGTaGTGCTGCTCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMEQGAL*CCSEFH
Trigger: GTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTC...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGGGAACAGGCTGGGCCTaGAGGCCCACTCGAATTCTT +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLGTGWA*RPTRIL
Trigger: AAGAATTCGAGTGGGCCTCCAGGCCCAGCCTGTTCC...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCATCTGGAACAGGCTaGGCCTGGAGGCCCACTCGA +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFSSGTG*AWRPTR
Trigger: TCGAGTGGGCCTCCAGGCCCAGCCTGTTCCAGATGA...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp CACATGAGCCCCTTGGTTTACGAGGACTTCTGCCACATTCACTCGATCTTCTTGCTCTGTACAGTTGCGTaGCTAACCCCACAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: HMSPLVYEDFCHIHSIFLLCTVA*LTPQFL
Trigger: TAGAAACTGTGGGGTTAGCCACGCAACTGTACAGAG...CAAGAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTTCTCTCTGGCAGAGATaGAGACTGGCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFSLWQR*RLARSS
Trigger: GCTGCTGCGAGCCAGTCTCCATCTCTGCCAGAGAGA...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGCTAGGGGGTCCTGCATaGTCTGTAACCGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMLGGPA*SVTDSS
Trigger: TGAGGAATCGGTTACAGACCATGCAGGACCCCCTAG...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACACCACATGGCATGTTTTaGACTACTAACATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTPHGMF*TTNIAR
Trigger: TCTGGCAATGTTAGTAGTCCAAAACATGCCATGTGG...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTTCTTCTCTGGGCTGCTaGGCAGACTGGGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFSSLGC*ADWVPS
Trigger: AGAAGGCACCCAGTCTGCCCAGCAGCCCAGAGAAGA...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GGACTCTGTGGACTGCTCCTTTTCTCACTGCCGGCCTTTTCACTCTTTGATTTTATCAAGCAATCCGCCTaGATGGTCCCCTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: GLCGLLLFSLPAFSLFDFIKQSA*MVPFFH
Trigger: GTGAAAGAAGGGGACCATCCAGGCGGATTGCTTGAT...AAAATCAAAGAGTGAAAAGGCCGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTTTTCTCACTGCCGTCACTTCCTCTGAACTaGGTGTTTCTGGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: LISVRSHGLCGLLLFSLPSLPLN*VFLGLK
Trigger: CTTTAACCCCAGAAACACCCAGTTCAGAGGAAGTGA...CGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTTTTCTCACTCACTCTGTGATGGACTaGTCGTTGTTCCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: HPDICPFTWTLWTAPFLTHSVMD*SLFPFW
Trigger: CCAGAATGGGAACAACGACCAGTCCATCACAGAGTG...AGTGAGAAAAGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp GGACTCTGTGGACTGCTCCTTTTCTCACTGCCGGCCTTTTCACTCTTTGATTTTTACCGCCAGCCCAAATaGCTTAGTTTCATCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GLCGLLLFSLPAFSLFDFYRQPK*LSFIFP
Trigger: CGGGAAGATGAAACTAAGCCATTTGGGCTGGCGGTA...AAAATCAAAGAGTGAAAAGGCCGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACACACAAAGAGGACCAATaGGGTGGATTGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTHKEDQ*GGLART
Trigger: AGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTG...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATGGCCCAGGCGGGGAGTaGCATGGAGCTCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDGPGGE*HGAPGK
Trigger: TTTGCCTGGAGCTCCATGCCACTCCCCGCCTGGGCC...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR CCA 90 bp TACTATTGCCATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTATCTGTCCGTTCACATaGACTCTGTGGACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: YYCHPDICPFTWTLWTAPICPFT*TLWTAP
Trigger: AGGAGCAGTCCACAGAGTCCATGTGAACGGACAGAT...AGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp AGCTTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACAGCTGCAGCTCACATTaGTGGTGTTTGGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SFCSRCKTYPNLSWDWQNSCSSH*WCLVRL
Trigger: GAGCCTCACCAAACACCACCAATGTGAGCTGCAGCT...GTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
3UTR CAA 72 bp GAAGTGCCCCCTGTAATGCTACAGAGAAGACGCAGATaGGGTGTAGTGTCCCCTTTGTATCCATTGGATACA +
Preference number: 4 (lower is better)
Translates to: EVPPVMLQRRRR*GVVSPLYPLDT
Trigger: TGTATCCAATGGATACAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGCTATGTGGAGCGGAGTaGAGCCACTCTTTGATTCCA +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMLCGAE*SHSLIP
Trigger: TGGAATCAAAGAGTGGCTTCACTCCGCTCCACATAG...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGTGTCATTCCTTGCGGTaGAATCCACAGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVCHSLR*NPQQPL
Trigger: GAGCGGCTGCTGTGGATTTCACCGCAAGGAATGACA...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp CAGGAGATTGGCGACTTCAAGCTTTCCATATTTTGCTGCCACATGAAGAGGAGTGCTTTAGCTTCTACCTaGGCTCCGTCTTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: QEIGDFKLSIFCCHMKRSALAST*APSCTR
Trigger: TCTGGTACAAGACGGAGCTCAGGTAGAAGCTAAAGC...ACTCCTCTTCATGTGGCAGCAAAATATGGAAAGCTTGAAGTCGCCAATCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCCCTGCTGTGCTGCTTaGTGTAATGGCGTATACCCA +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLPCCAA*CNGVYP
Trigger: TGGGTATACGCCATTACATCAAGCAGCACAGCAGGG...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTCCCTGCTGTGCTGCTTaGTGTAATGGCGTATACCCA +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIPCCAA*CNGVYP
Trigger: TGGGTATACGCCATTACATCAAGCAGCACAGCAGGG...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACAGGGGAGGCGTTGTTCTaGAGTAAGACATTTATTATA +
Preference number: 4 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTGEALF*SKTFII
Trigger: TATAATAAATGTCTTACTTCAGAACAACGCCTCCCC...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACCAGGGTGTCCACTACTaGGATGTAGCCGAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYQGVHY*DVAEAP
Trigger: CGGCGCCTCGGCTACATCTCAGTAGTGGACACCCTG...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTGGGAAAGATGCTTaGACAAGGGGCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADISGKDA*TRGTVV
Trigger: CACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAGA...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp TCTTTGCTTCTTGCGACTTCCTCAAAATTCTCTTGTTGCTCTAAAGTTTTGTCCGTGATGTCTTCCCACTaGGCAGGCGAAGTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SLLLATSSKFSCCSKVLSVMSSH*AGEVPP
Trigger: AGGGGGCACTTCGCCTGCTCAGTGGGAAGACATCAC...GGACAAAACTTTAGAGCAACAAGAGAATTTTGAGGAAGTCGCAAGAAGCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGCTGACCCTGTTCCTCTaGACAAGGAAAAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMLTLFL*TRKSIV
Trigger: CACGATGCTTTTCCTTGTTCAGAGGAACAGGGTCAG...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTGGCCACCCCGGGAAGTCTCGCCACTTGTACAAAACTaGCATAAACGGGTAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LSLADFVVTEGWPPREVSPLVQN*HKRVKF
Trigger: AAACTTTACCCGTTTATGTCAGTTTTGTACAAGTGG...CGAGACTTCCCGGGGTGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCCTGTTCCTCCTCCTCTaGCTCCTCAGAAACCTCGGG +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFLFLLL*LLRNLG
Trigger: CCCGAGGTTTCTGAGGAGTCAGAGGAGGAGGAACAG...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTTTTCTCACTGCCGGCTCATCTTGCAGATTaGCTTCAATCATGTCAACCT +
Preference number: 4 (lower is better)
Translates to: LISVRSHGLCGLLLFSLPAHLAD*LQSCQP
Trigger: AGGTTGACATGATTGAAGTCAATCTGCAAGATGAGC...CGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACACAATGGAACACTCTGTaGTGGACTGGTCGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTQWNTL*WTGRCS
Trigger: GGAACAACGACCAGTCCATCACAGAGTGTTCCATTG...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGTGGGCCCCTGACTTCTaGTCAGTCTTATCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLWAPDF*SVLSGV
Trigger: GACTCCTGATAAGACTGATCAGAAGTCAGGGGCCCA...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TGTTTTCTTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTGGCCACCCCGGGAAACATTTTTCCTTCATaGAATGGGAAGGGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: CFLISSRLRCNRRLATPGNIFPS*NGKGLG
Trigger: GCCTAACCCCTTCCCATTTCATGAAGGAAAAATGTT...TCCCGGGGTGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAAGAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTCTGGATGTGCCTTCCTaGCACTCTCCGCTGGTCGGG +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPLDVPS*HSPLVG
Trigger: CCCGACCAGCGGAGAGTGTCAGGAAGGCACATCCAG...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTGGCCACCCCGGGAAGTCTCGATTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LSLADFVVTEGWPPREVSIDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAT...CGAGACTTCCCGGGGTGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAGTTACTCTTCGAGCTTaGGCGCAGGACTCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTVTLRA*AQDSRF
Trigger: AAACCTAGAGTCCTGCGCTCAAGCTCGAAGAGTAAC...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000612776.4
CDS-3UTR TCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGGCTGGTTCTTCAACATaGCCAGATCCATGTATTTTT +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRAGSST*PDPCIF
Trigger: AAAAATACATGGATCTGGTCATGTTGAAGAACCAGC...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp AGATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCAGCATCCCAGTTTTGTCAGTaGGCTCTTTTGCTACTGTGC +
Preference number: 4 (lower is better)
Translates to: RLVLPVLSVSSFATVLAASQFCQ*ALLLLC
Trigger: GCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGA...TGCTGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR TCA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACAAAAGAGTCAAAGCATTaGGACCAAAGTCCATTTACG +
Preference number: 4 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTKESKH*DQSPFT
Trigger: CGTAAATGGACTTTGGTCTCAATGCTTTGACTCTTT...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp GCTGTTGTACTATGTCTGCTTTCCCCAGTCGGGCTGAAATGTGGAGTGGTGTTTCCTGAGATAAGGTCCTaGCAAGACTTTGTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: AVVLCLLSPVGLKCGVVFPEIRS*QDFVAC
Trigger: ACAAGCAACAAAGTCTTGTCAGGACCTTATCTCAGG...AAACACCACTCCACATTTCAGCCCGACTGGGGAAAGCAGACATAGTACAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp TTAAGGTCCTGTGGCCCAAGATATTTGTCTGTGTCCCCGGTCATTGCATCTTCATTGTTGCAAAGCCACTaGCAATGGTGTGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: LRSCGPRYLSVSPVIASSLLQSH*QWCEAI
Trigger: GATGGCTTCACACCATTGGCAGTGGCTTTGCAACAA...TGAAGATGCAATGACCGGGGACACAGACAAATATCTTGGGCCACAGGACCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTCCTTGCTCCACAGTaGAGTGGTGTCAGACCATCC +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFLLAPQ*SGVRPS
Trigger: GGATGGTCTGACACCACTGCACTGTGGAGCAAGGAG...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp AGCTTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACAACATTTCTACCACCTaGTCGTGGCCACTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SFCSRCKTYPNLSWDWQNNISTT*SWPLLA
Trigger: AGCAAGGAGTGGCCACGAGCAGGTGGTAGAAATGTT...GTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTGGCTGCATTTGGAGATaGCCCTTGCTGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFGCIWR*PLLQQL
Trigger: CAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGCC...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TCTGTAGCAGGAGATTGGCGACTTCAAGCTTTCCATATTTTGCTGCCACATGAACCCAGAAGTTGTGGCTaGATTTGGAGATGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SVAGDWRLQAFHILLPHEPRSCG*IWRCPL
Trigger: CAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGG...TTCATGTGGCAGCAAAATATGGAAAGCTTGAAGTCGCCAATCTCCTGCTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp AAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTCAGGACCTGATTATCGTAATGTaGAGCTACATGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: KMLEQGALWCCSEFHLQDLIIVM*SYMQWC
Trigger: ACACCACTGCATGTAGCTGCACATTACGATAATCAG...GTCCTGAAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAGTGCCCTTCCTGAGCTaGGAGATGGACGGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRVPFLS*EMDGSN
Trigger: ATTGCTTCCGTCCATCTCGCAGCTCAGGAAGGGCAC...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGGCCCATGTAACCCTCTaGAGGCAGGGAATCATCACC +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTAHVTL*RQGIIT
Trigger: GGTGATGATTCCCTGCCTGCAGAGGGTTACATGGGC...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp GCTGCATTTGGAGATGCCCCTTGCTGCAACAGCTGTTGTACTATGTCTGCTTTCGTGAATGTTAGATGCTaGTCTTTGGATGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: AAFGDAPCCNSCCTMSAFVNVRC*SLDGTR
Trigger: CCTTGTGCCATCCAAAGAGCAGCATCTAACATTCAC...GAAAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp TCGGACAACGACGTGTTTCTTGAGGTACTTTCTTCCTCATCGGACAACTCGGACTGGGGAGAAGGAGGTTaGTTTTGCTGTCTAGTTGTA +
Preference number: 4 (lower is better)
Translates to: SDNDVFLEVLSSSSDNSDWGEGG*FCCLVV
Trigger: TACAACTAGACAGCAAAAGCAACCTCCTTCTCCCCA...GTCCGAGTTGTCCGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp TACTATTGCCATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTACTGGTGAAGGTGGCTaGACTCTAATGACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: YYCHPDICPFTWTLWTAPTGEGG*TLMTGS
Trigger: TGAACCTGTCATTAGAGTGCAGCCACCTTCACCAGT...AGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp AACGACGTGTTTCTTGAGGTACTTTCTTCCTCATCGGACAACTCGGACTGCATCCTTGCTCATGTCAATTaGACCACTGCGAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: NDVFLEVLSSSSDNSDCILAHVN*TTASHL
Trigger: GAGATGACTCGCAGTGGTGCAATTGACATGAGCAAG...GATGCAGTCCGAGTTGTCCGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp CTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTTTTCTCACTGCCGCAACAAAATCCCTCTTaGTCATGTCAATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: LISVRSHGLCGLLLFSLPQQNPS*SCQLHH
Trigger: GTGGTGCAATTGACATGAGCAAGAGGGATTTTGTTG...CGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACATGTATGGCTTCCATTTaGTTCAAATTTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTCMASI*FKFASF
Trigger: GAAGCTGGCAAATTTGAAGCAAATGGAAGCCATACA...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACACGAGGAACATCAGGATaGCAAAAAGTCCTTATTTAC +
Preference number: 4 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTRGTSG*QKVLIY
Trigger: GTAAATAAGGACTTTTTGGCATCCTGATGTTCCTCG...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATGGGGCTGCTGCTGCTaGTCCTTCCAGGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQWGCCC*SFQELQ
Trigger: CTGGAGTTCCTGGAAGGAGCAGCAGCAGCAGCCCCA...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373827.6
CDS-3UTR GCA 90 bp AGATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCAGCATGTGTCCCCGGTCATTaGATCTTCACTTTTCACCGT +
Preference number: 4 (lower is better)
Translates to: RLVLPVLSVSSFATVLAACVPGH*IFTFHR
Trigger: ACGGTGAAAAGTGAAGATGCAATGACCGGGGACACA...TGCTGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR GCA 90 bp ATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCAGCATGGCTCTTTTGCTACTGTaGTGGCAGCATGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: IGSPSFVSELFCYCAGSMALLLL*WQHDCK
Trigger: TTTGCAGTCATGCTGCCAGCACAGTAGCAAAAGAGC...CATGCTGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR GCA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACAGTACCTCAATATCTTTaGTTCTTGCGACTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTVPQYL*FLRLPQ
Trigger: TTGAGGAAGTCGCAAGAAGCAAAGATATTGAGGTAC...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GCTGCATTTGGAGATGCCCCTTGCTGCAACAGCTGTTGTACTATGTCTGCTTTCGGCTGCCATATACAATaGCGTGAAACCATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: AAFGDAPCCNSCCTMSAFGCHIQ*RETILR
Trigger: TCTCAGAATGGTTTCACGCCATTGTATATGGCAGCC...GAAAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGTGCTCCACAGTGCAGTaGTGTCAGACCATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVCSTVQ*CQTIPG
Trigger: ACCAGGGATGGTCTGACACCACTGCACTGTGGAGCA...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACGGCAGCAACATGGATTaGGGTAAGGCCCGACTCGGT +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYGSNMD*GKARLG
Trigger: ACCGAGTCGGGCCTTACCCCAATCCATGTTGCTGCC...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GGAGACCATAACTTAAATTCATTAGTGCTATGTTTTAACCAGCTAAGACAGCCCCGCACAACTTCAGCTTaGCCGGAGCGAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: GDHNLNSLVLCFNQLRQPRTTSA*PERAAM
Trigger: CATGGCAGCTCGCTCCGGCCAAGCTGAAGTTGTGCG...GGGCTGTCTTAGCTGGTTAAAACATAGCACTAATGAATTTAAGTTATGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp TTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACGCGGGCCGTACACTTGCGTaGAGGAATGATGATTCTCAT +
Preference number: 4 (lower is better)
Translates to: FCSRCKTYPNLSWDWQNAGRTLA*RNDDSH
Trigger: ATGAGAATCATCATTCCTCCACGCAAGTGTACGGCC...CGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp ATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTGACCACTGCAAAATACTaGGGGAAATCTTTCGTGATA +
Preference number: 4 (lower is better)
Translates to: IPSLSGRPHEPLGLRGLLTTAKY*GKSFVI
Trigger: TATCACGAAAGATTTCCCCCAGTATTTTGCAGTGGT...CAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp CAAAGTAGATTATCCGTGCATTTCTTCTGCATTGATAGTGAATCCTTACTGGGGGGAACAGGCTGGGCCTaGAGGCCCACTCGAATTCTT +
Preference number: 4 (lower is better)
Translates to: QSRLSVHFFCIDSESLLGGTGWA*RPTRIL
Trigger: AAGAATTCGAGTGGGCCTCCAGGCCCAGCCTGTTCC...CCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTGGAACAGGCTGGGCCTaGAGGCCCACTCGAATTCTT +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRIGTGWA*RPTRIL
Trigger: AAGAATTCGAGTGGGCCTCCAGGCCCAGCCTGTTCC...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp CTGGGAAAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTGAATTTCCGTCTTCTTaGTTCCACAGTGACAATTGG +
Preference number: 4 (lower is better)
Translates to: LGKMLEQGALWCCSEFHLEFPSS*FHSDNW
Trigger: CCAATTGTCACTGTGGAACCAAGAAGACGGAAATTC...AAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTCGACCACAGGGCTCTTaGCTGGTGTCTCTAATCTTG +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISRPQGS*LVSLIL
Trigger: CAAGATTAGAGACACCAGCCAAGAGCCCTGTGGTCG...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGGGCAGAGATGGAGACTaGCTCGCAGCAGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTGRDGD*LAAACC
Trigger: ACAACAAGCTGCTGCGAGCCAGTCTCCATCTCTGCC...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACCCATTCTGGTGGTTGTaGTTATGTGAGTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHPFWWL*LCESLL
Trigger: AAGAAGAGACTCACATAACCACAACCACCAGAATGG...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGTTATACGCTCCAGTTTaGGTTTCATTTGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRLYAPV*VSFGCP
Trigger: AGGACAACCAAATGAAACCCAAACTGGAGCGTATAA...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCCCTTCTCCTCGGCCTTaGGGAAGCCTTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFPSPRP*GSLVHQ
Trigger: CTGATGGACAAGGCTTCCCCAAGGCCGAGGAGAAGG...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTAGCTGGAATCCAGACTaGGGCCCATCTGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFSWNPD*GPSGAL
Trigger: CAAAGCACCAGATGGGCCCCAGTCTGGATTCCAGCT...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTTCTTCCTCATCGACAATTTCGTTGCTTTaGGCATGCTCATCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: PREVSDNDVFLEVLSSSSTISLL*ACSSLV
Trigger: AACCAAAGATGAGCATGCCCAAAGCAACGAAATTGT...CGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGTTTCCAATCCATCAATaGGACTGTGGTCGAATACAT +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRFPIHQ*DCGRIH
Trigger: ATGTATTCGACCACAGTCCCATTGATGGATTGGAAA...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTCTGGTCCGCATCCAGTaGTGGAGGAGGGGGAAATTC +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRILVRIQ*WRRGKF
Trigger: GAATTTCCCCCTCCTCCACCACTGGATGCGGACCAG...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGCACTCTGTGATGGACTaGTCGTTGTTCCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMHSVMD*SLFPFW
Trigger: CCAGAATGGGAACAACGACCAGTCCATCACAGAGTG...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGAGTTGGCGTTCTGGCTaGCGTTGTATCAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRSWRSG*RCIRGC
Trigger: ACAACCCCTGATACAACGCCAGCCAGAACGCCAACT...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GCTGCCTCTGTTTTCTTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTGGCCAGTTAGGCTCACTAGTTaGGGTACTTTCATCAGTTGG +
Preference number: 4 (lower is better)
Translates to: AASVFLSLADFVVTEGWPVRLTS*GTFISW
Trigger: CCAACTGATGAAAGTACCCCAACTAGTGAGCCTAAC...TGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAAGAAAACAGAGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGTACTGGCAACTTGGATaGAAGCTGTTTGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMYWQLG*KLFGLA
Trigger: GGCAAGGCCAAACAGCTTCCATCCAAGTTGCCAGTA...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TGGCCACCCCGGGAAGTCTCGGACAACGACGTGTTTCTTGAGGTACTTTCTTCCCATCTGCAAAACTTCTaGTGCCTGAAATATTTCCAT +
Preference number: 4 (lower is better)
Translates to: WPPREVSDNDVFLEVLSSHLQNF*CLKYFH
Trigger: ATGGAAATATTTCAGGCACCAGAAGTTTTGCAGATG...GGAAGAAAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGATGGAGGCTAAGCCTTaGCTTGCCATCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRMEAKP*LAICWR
Trigger: TCTCCAGCAGATGGCAAGCCAAGGCTTAGCCTCCAT...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTAAGAAAACAAAGCAGTaGCCCAGGCGGGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLKKTKQ*PRRGVA
Trigger: TGCCACTCCCCGCCTGGGCCACTGCTTTGTTTTCTT...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR CCA 90 bp AGAATGGTTACAAATGATTGGCTTACTGAAAGGTGTCTACATCTTATAGCCAGTGAGGAGGCCATGTTGTaGGGCTGCTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RMVTNDWLTERCLHLIASEEAML*GCCCCS
Trigger: GGAGCAGCAGCAGCAGCCCCACAACATGGCCTCCTC...ACTGGCTATAAGATGTAGACACCTTTCAGTAAGCCAATCATTTGTAACCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373827.6
CDS-3UTR CCA 90 bp ATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCAGCATGCTTTTGCTACTGTGCTaGCAGCATGACTGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: IGSPSFVSELFCYCAGSMLLLLC*QHDCKV
Trigger: CACTTTGCAGTCATGCTGCCAGCACAGTAGCAAAAG...CATGCTGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR CCA 90 bp TCGGCTACTATTGCCATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGTTCACATGGACTCTGTaGACTGCTCCTTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: SATIAILISVRSHGLCGLFTWTL*TAPFLT
Trigger: AGTGAGAAAAGGAGCAGTCCACAGAGTCCATGTGAA...CAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTAGCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp TCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTGCCACATTCCTCAGGAAGAAACTaGGTGTTCTCTATATCAAAC +
Preference number: 4 (lower is better)
Translates to: SLSGRPHEPLGLRGLLPHSSGRN*VFSISN
Trigger: GTTTGATATAGAGAACACCCAGTTTCTTCCTGAGGA...ATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACAGCTCTTCTTCAGCATTaGTTTCTAAATCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTALLQH*FLNPCF
Trigger: AAAACAGGGATTTAGAAATCAATGCTGAAGAAGAGC...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCTGTTGTACTATGTCTGCTTTCCCCAGTCGGGCTGAAATGTGGAGTGGTGTTTCCATATACAATGGCGTaGAACCATTCTGAGATTGTG +
Preference number: 4 (lower is better)
Translates to: AVVLCLLSPVGLKCGVVFPYTMA*NHSEIV
Trigger: CACAATCTCAGAATGGTTTCACGCCATTGTATATGG...AAACACCACTCCACATTTCAGCCCGACTGGGGAAAGCAGACATAGTACAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGGAAACGACTTGGTCGTaGCCTTGTTGCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLETTWS*PCCKAT
Trigger: AGTGGCTTTGCAACAAGGTCACGACCAAGTCGTTTC...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGGCTTTAGCTTCTACCTaGGCTCCGTCTTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLALAST*APSCTR
Trigger: TCTGGTACAAGACGGAGCTCAGGTAGAAGCTAAAGC...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTATCCACGTGCCCTTCCTaGGCTGCGAGATGGACGGAA +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVSTCPS*AARWTE
Trigger: TTCCGTCCATCTCGCAGCTCAGGAAGGGCACGTGGA...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp AGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGGTCTGGGCGTCCACATaGGCCCCTTGGTTTACGAGG +
Preference number: 4 (lower is better)
Translates to: RIKVKTAMVSASVEFRFTVWAST*APWFTR
Trigger: CCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGAC...CGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTTTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TCCATTTGGCAACAATCTTTAATGGACAGGCAATATATAACATTGCTGAAAGTCCAGGGTGTCCACTACTaGGATGTAGCCGAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SIWQQSLMDRQYITLLKVQGVHY*DVAEAP
Trigger: CGGCGCCTCGGCTACATCTCAGTAGTGGACACCCTG...GACTTTCAGCAATGTTATATATTGCCTGTCCATTAAAGATTGTTGCCAAATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGAAGACCTATCCGAACTaGAGGAGCGGAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VNFYFLLTFLPRISQYWQKTYPN*RSGGWQ
Trigger: CTGCCAGCCTCCGCTCCTTCAGTTCGGATAGGTCTT...CTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACAAATCAAATTCCCTTGTaGATGTTAGATGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTNQIPL*MLDAAL
Trigger: AAGAGCAGCATCTAACATTCACAAGGGAATTTGATT...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp GCTGTTGTACTATGTCTGCTTTCCCCAGTCGGGCTGAAATGTGGAGTGGTGTTTGGCTTGAAACAAGATTaGCATTGTCTAAGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AVVLCLLSPVGLKCGVVFGLKQD*HCLRCL
Trigger: CAGACACCTTAGACAATGTCAATCTTGTTTCAAGCC...AAACACCACTCCACATTTCAGCCCGACTGGGGAAAGCAGACATAGTACAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp TTAAGGTCCTGTGGCCCAAGATATTTGTCTGTGTCCCCGGTCATTGCATCTTCAGAGGGATTTCCACTATaGCAGGGCCTAAAAATTGTG +
Preference number: 4 (lower is better)
Translates to: LRSCGPRYLSVSPVIASSEGFPL*QGLKIV
Trigger: CACAATTTTTAGGCCCTGTCATAGTGGAAATCCCTC...TGAAGATGCAATGACCGGGGACACAGACAAATATCTTGGGCCACAGGACCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGTCTGGGAAAGATGCTTaGACAAGGGGCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVSGKDA*TRGTVV
Trigger: CACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAGA...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACGTGATGTCTTCCCACTaGGCAGGCGAAGTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYVMSSH*AGEVPP
Trigger: AGGGGGCACTTCGCCTGCTCAGTGGGAAGACATCAC...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp TTCTGTCCAACTAAGTCCCAGGTGATCGGCTACTATTGCCATCCTGATATCTGTATAACTCACTTCCTCTaGACTGGGTGTTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FCPTKSQVIGYYCHPDICITHFL*TGCFWG
Trigger: ACCCCAGAAACACCCAGTTCAGAGGAAGTGAGTTAT...ACAGATATCAGGATGGCAATAGTAGCCGATCACCTGGGACTTAGTTGGACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGGTGGCATCCGTGTCATaGGAAAACTCTGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTVASVS*ENSAVV
Trigger: CACCACAGCAGAGTTTTCTCATGACACGGATGCCAC...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TATGACCTCCTGCTTGATCGGAACCAAAGCATATCACATATACCTAAAGTCAAAGTCTGCCTTCCAGTGTaGAGAACTGGGCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: YDLLLDRNQSISHIPKVKVCLPV*RTGPLT
Trigger: AGTCAGGGGCCCAGTTCTTCACACTGGAAGGCAGAC...TTTGACTTTAGGTATATGTGATATGCTTTGGTTCCGATCAAGCAGGAGGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TACTATTGCCATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTCAACGACGTGTTTCTTaGGGTACTTTCTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: YYCHPDICPFTWTLWTAPQRRVS*GTFFLI
Trigger: GATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTG...AGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTGTTACTCTTCGAGCTTaGGCGCAGGACTCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISVTLRA*AQDSRF
Trigger: AAACCTAGAGTCCTGCGCTCAAGCTCGAAGAGTAAC...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000612776.4
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACACTTATGATCCTTGACTaGCCGTTCGCTGTTACGAGT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTLMILD*PFAVTS
Trigger: ACTCGTAACAGCGAACGGTCAGTCAAGGATCATAAG...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR GCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAACTCGTGGCCACTCCTTaGTCCACAGTGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQLVATP*STVQWC
Trigger: ACACCACTGCACTGTGGAGCAAGGAGTGGCCACGAG...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTAACATTTCTACCACCTaGTCGTGGCCACTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISNISTT*SWPLLA
Trigger: AGCAAGGAGTGGCCACGAGCAGGTGGTAGAAATGTT...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGTTGGCCGGAGCGAGCTaGCATGTGCAGTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWLAGAS*HVQCCF
Trigger: GAAACAGCACTGCACATGGCAGCTCGCTCCGGCCAA...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTGCCACATCTTTCCATATTTTGCTaGCACATGAAGAGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: SLSGRPHEPLGLRGLLPHLSIFC*HMKRSK
Trigger: TTTACTCCTCTTCATGTGGCAGCAAAATATGGAAAG...ATGTGGCAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGATCCTTGCCGGGTAACTaGGTTGGCATCAGCACCATA +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRSLPGN*VGISTI
Trigger: TATGGTGCTGATGCCAACGCAGTTACCCGGCAAGGA...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGACGGAAGCAATTCCTTaGCGGGTAACTGCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTTEAIP*RVTALA
Trigger: TGCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGT...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCGTGCCCTTCCTGAGCTaGGAGATGGACGGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFVPFLS*EMDGSN
Trigger: ATTGCTTCCGTCCATCTCGCAGCTCAGGAAGGGCAC...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TTAAGGTCCTGTGGCCCAAGATATTTGTCTGTGTCCCCGGTCATTGCATCTTCAGTTTACGAGGACTTCTaGCACATTCACTCGATCTTC +
Preference number: 4 (lower is better)
Translates to: LRSCGPRYLSVSPVIASSVYEDF*HIHSIF
Trigger: GAAGATCGAGTGAATGTGGCAGAAGTCCTCGTAAAC...TGAAGATGCAATGACCGGGGACACAGACAAATATCTTGGGCCACAGGACCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCGCCCATGTAACCCTCTaGAGGCAGGGAATCATCACC +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFAHVTL*RQGIIT
Trigger: GGTGATGATTCCCTGCCTGCAGAGGGTTACATGGGC...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp CAGAGCATGTGTATTTGCGTCGAGAACATTTCGCTAAATTCACATCTTCATCCAGCCCATGTAACCCTCTaGAGGCAGGGAATCATCACC +
Preference number: 4 (lower is better)
Translates to: QSMCICVENISLNSHLHPAHVTL*RQGIIT
Trigger: GGTGATGATTCCCTGCCTGCAGAGGGTTACATGGGC...TGGATGAAGATGTGAATTTAGCGAAATGTTCTCGACGCAAATACACATGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR GCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATGGGGCACTGTGGTGCTaGTCAGAATTCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNGALWC*SEFHLQ
Trigger: CTGAAGGTGGAATTCTGAGCAGCACCACAGTGCCCC...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACGGGGCACTGTGGTGCTaGTCAGAATTCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYGALWC*SEFHLQ
Trigger: CTGAAGGTGGAATTCTGAGCAGCACCACAGTGCCCC...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGCAAGGGGCACTGTGGTaGTGCTCAGAATTCCACCTT +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLQGALW*CSEFHL
Trigger: AAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTG...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGACAAGGGGCACTGTGGTaGTGCTCAGAATTCCACCTT +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRQGALW*CSEFHL
Trigger: AAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTG...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCACGTAGCTTCCGTGACTaGTGGAGCTCTAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSRSFRD*WSSSQG
Trigger: ACCCTGGCTAGAGCTCCAGCAGTCACGGAAGCTACG...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGCTTCCACTGTGGACTTaGTGTCCTCAGTCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVLPLWT*CPQSVG
Trigger: CCCAACAGACTGAGGACAGCAAGTCCACAGTGGAAG...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp AACGACGTGTTTCTTGAGGTACTTTCTTCCTCATCGGACAACTCGGACTGCATCGCCAAGTCTTTAGCCTaGTGCTCAGAAAAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: NDVFLEVLSSSSDNSDCIAKSLA*CSEKES
Trigger: TGACTCTTTTTCTGAGCAGCAGGCTAAAGACTTGGC...GATGCAGTCCGAGTTGTCCGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp CAAAGTAGATTATCCGTGCATTTCTTCTGCATTGATAGTGAATCCTTACTGGGGAGCCACTACTGGATGTaGCTTCCTGACACTCTCCGC +
Preference number: 4 (lower is better)
Translates to: QSRLSVHFFCIDSESLLGSHYWM*LPDTLR
Trigger: GCGGAGAGTGTCAGGAAGGCACATCCAGTAGTGGCT...CCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGGAAGCTGTTTGGCCTTaGCTTTCTCTGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVEAVWP*LSLAAL
Trigger: AAGGGCAGCCAGAGAAAGGCAAGGCCAAACAGCTTC...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAGTGATCGGCTACTATTaGCATCCTGATATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTVIGYY*HPDICP
Trigger: CGGACAGATATCAGGATGGCAATAGTAGCCGATCAC...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTCACTGCATTGCTAATTaGACACGCGCCAATCCGGAA +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIHCIAN*TRANPE
Trigger: TTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTGACTGGAGGTCCATCTaGGGAATGCTCTATGTTCCC +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFDWRSI*GMLYVP
Trigger: GGGAACATAGAGCATTCCGCAGATGGACCTCCAGTC...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTATGTTGTGGGGCTGCTaGTGCTGCTCCTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRIMLWGC*CCSFQE
Trigger: TTCCTGGAAGGAGCAGCAGCAGCAGCCCCACAACAT...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373827.6
CDS-3UTR CCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGTCTTTGGAAGCAAGGTaGAGAGCGTTCAACCCATTC +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMSLEAR*RAFNPF
Trigger: GAATGGGTTGAACGCTCTCCACCTTGCTTCCAAAGA...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp AGCTTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACTCTTTGGAAGCAAGGTaGAGAGCGTTCAACCCATTC +
Preference number: 4 (lower is better)
Translates to: SFCSRCKTYPNLSWDWQNSLEAR*RAFNPF
Trigger: GAATGGGTTGAACGCTCTCCACCTTGCTTCCAAAGA...GTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GACCATAACTTAAATTCATTAGTGCTATGTTTTAACCAGCTAAGACAGCCCCAGTCTACCACCTGCTCGTaGCCACTCCTTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: DHNLNSLVLCFNQLRQPQSTTCS*PLLAPQ
Trigger: CTGTGGAGCAAGGAGTGGCCACGAGCAGGTGGTAGA...CTGGGGCTGTCTTAGCTGGTTAAAACATAGCACTAATGAATTTAAGTTATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGGACTCGGTTACAGCTTaGATGGATGCACCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRDSVTA*MDAPCF
Trigger: GAAACACGGTGCATCCATCCAAGCTGTAACCGAGTC...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAGGCAGCAACATGGATTaGGGTAAGGCCCGACTCGGT +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSGSNMD*GKARLG
Trigger: ACCGAGTCGGGCCTTACCCCAATCCATGTTGCTGCC...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTGTACCCAGAAGTTGTaGCTGCATTTGGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISCTQKL*LHLEMP
Trigger: GGGCATCTCCAAATGCAGCCACAACTTCTGGGTACA...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGAGCAGCCAAATGGAGTaGGGTCAGGCCGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVSSQME*GQAALI
Trigger: AATAAGAGCGGCCTGACCCCACTCCATTTGGCTGCT...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACACCACTGCAAAATACTaGGGGAAATCTTTCGTGATA +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHTTAKY*GKSFVI
Trigger: TATCACGAAAGATTTCCCCCAGTATTTTGCAGTGGT...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTATCATCTGGAACAGGCTaGGCCTGGAGGCCCACTCGA +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVSSGTG*AWRPTR
Trigger: TCGAGTGGGCCTCCAGGCCCAGCCTGTTCCAGATGA...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGTTTGGGAGTTCAGGTTaGAATGGCTTCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRFGSSG*NGFSSG
Trigger: GCCTGAGGAGAAGCCATTCCAACCTGAACTCCCAAA...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGTCCTTCTCTGCATGCTaGGCTGAGGTTTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTSFSAC*AEVSAA
Trigger: TGCTGCTGAAACCTCAGCCCAGCATGCAGAGAAGGA...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGATTCCCTCCCTCTGTCTaGGCTAGTGGTGCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRFPPSV*ASGASF
Trigger: AAAACTCGCACCACTAGCCCAGACAGAGGGAGGGAA...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TTCTGTCCAACTAAGTCCCAGGTGATCGGCTACTATTGCCATCCTGATATCTGTTGGGCTGGGTTTGCCTaGTATATAAGCTATGAGCGA +
Preference number: 4 (lower is better)
Translates to: FCPTKSQVIGYYCHPDICWAGFA*YISYER
Trigger: TCGCTCATAGCTTATATACCAGGCAAACCCAGCCCA...ACAGATATCAGGATGGCAATAGTAGCCGATCACCTGGGACTTAGTTGGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACATCAGGGGTTGTTGCTaGAGAGCGGTCTTCTACCGC +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYIRGCC*RAVFYR
Trigger: GCGGTAGAAGACCGCTCTCCAGCAACAACCCCTGAT...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGAAATATCATCAGTTGGCGTTCTaGCTGGCGTTGTATCAGGGG +
Preference number: 4 (lower is better)
Translates to: QGHGKHCSHLQNFWCLKYHQLAF*LALYQG
Trigger: CCCCTGATACAACGCCAGCCAGAACGCCAACTGATG...ATATTTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCAGGGAGCCACTACTaGATGTGCCTTCCTGACACT +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYPGSHY*MCLPDT
Trigger: AGTGTCAGGAAGGCACATCCAGTAGTGGCTCCCTGG...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAATGGAATCTCTACACTaGTCAGGGCTGTCATCCAGT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTMESLH*SGLSSS
Trigger: ACTGGATGACAGCCCTGACCAGTGTAGAGATTCCAT...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000612776.4
CDS-3UTR CCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTTTGCTCAGACCCACTaGACCCCTCTTCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIFAQTH*TPLLHG
Trigger: TCCATGAAGAAGAGGGGTCCAGTGGGTCTGAGCAAA...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTTGCTCAGACCCACTaGACCCCTCTTCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISFAQTH*TPLLHG
Trigger: TCCATGAAGAAGAGGGGTCCAGTGGGTCTGAGCAAA...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp ACAAGAATCAGTGAAGAGTCACCCCCACCCAGAATCCCTCCCTCCTCTTCTAGGATAGTTTATTGGCCATaGAGAAAATCCTCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: TRISEESPPPRIPPSSSRIVYWP*RKSSVL
Trigger: CAAGACTGAGGATTTTCTCCATGGCCAATAAACTAT...CCTAGAAGAGGAGGGAGGGATTCTGGGTGGGGGTGACTCTTCACTGATTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTGTAGTGCAACCCTGTaGGGGTTTCCAGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISCSATL*GFPVPL
Trigger: AAGTGGAACTGGAAACCCCCACAGGGTTGCACTACA...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGACTGGAAAGGGGTAGGTaGTGTGTAGTGCAACCCTGT +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRLERGR*CVVQPC
Trigger: ACAGGGTTGCACTACACACCACCTACCCCTTTCCAG...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCTGGAAAGGGGTAGGTaGTGTGTAGTGCAACCCTGT +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLLERGR*CVVQPC
Trigger: ACAGGGTTGCACTACACACCACCTACCCCTTTCCAG...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGATGGACGCAGTTTAAATaGTCCCCTTGTGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRWTQFK*SPCVAM
Trigger: CATGGCCACACAAGGGGATCATTTAAACTGCGTCCA...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGGCTTTAGCTTCTACCTaGGCTCCGTCTTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVALAST*APSCTR
Trigger: TCTGGTACAAGACGGAGCTCAGGTAGAAGCTAAAGC...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACGATAAAGACGCTCCATaGTCCAAAAGGAACGCGGCC +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYDKDAP*SKRNAA
Trigger: GGCCGCGTTCCTTTTGGATCATGGAGCGTCTTTATC...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GCTGCATTTGGAGATGCCCCTTGCTGCAACAGCTGTTGTACTATGTCTGCTTTCTATTTTGCTGCCACATaGAGAGGAGTAAATCCTTTC +
Preference number: 4 (lower is better)
Translates to: AAFGDAPCCNSCCTMSAFYFAAT*RGVNPF
Trigger: GAAAGGATTTACTCCTCTTCATGTGGCAGCAAAATA...GAAAGCAGACATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAATGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTATTCCCATTCACAGTaGGTTCATTGGGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLYSHSQ*VHWGRR
Trigger: ACGCCTCCCCCAATGAACTCACTGTGAATGGGAATA...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTAAGACCTATCCGAACTaGAGGAGCGGAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPKTYPN*RSGGWQ
Trigger: CTGCCAGCCTCCGCTCCTTCAGTTCGGATAGGTCTT...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAGAGGGATTTCCACTATaGCAGGGCCTAAAAATTGTG +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTEGFPL*QGLKIV
Trigger: CACAATTTTTAGGCCCTGTCATAGTGGAAATCCCTC...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGTTGCAAACCGCTGTTTaGGGCAGTCCTTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLLQTAV*GSPFVV
Trigger: GACAACAAAAGGACTGCCTCAAACAGCGGTTTGCAA...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp TATGACCTCCTGCTTGATCGGAACCAAAGCATATCACATATACCTAAAGTCAAATGTCAGTGGCTGCACTaGCCACAGAGCTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: YDLLLDRNQSISHIPKVKCQWLH*PQSSQS
Trigger: ACTCTGTGAGCTCTGTGGTCAGTGCAGCCACTGACA...TTTGACTTTAGGTATATGTGATATGCTTTGGTTCCGATCAAGCAGGAGGTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGCAGAAACATATGACCTaGGTGGGGAAAATGGCATTG +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMQKHMT*VGKMAL
Trigger: CAATGCCATTTTCCCCACTCAGGTCATATGTTTCTG...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTCAGCAGCAGACTTGTaGACATCTGGAGACACTGCC +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNSAADL*TSGDTA
Trigger: GGCAGTGTCTCCAGATGTTCACAAGTCTGCTGCTGA...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGTCTCATCAGCAACTCTaGCGGGAATGTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTSHQQL*RECVTL
Trigger: CAGTGTCACACATTCCCGTCAGAGTTGCTGATGAGA...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp AGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGCCCGGGAGGAACTGGTaGAGGTGGCTGCACTCTAAT +
Preference number: 4 (lower is better)
Translates to: RIKVKTAMVSASVEFRFTPGRNW*RWLHSN
Trigger: ATTAGAGTGCAGCCACCTTCACCAGTTCCTCCCGGG...CGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTTTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GGACTCTGTGGACTGCTCCTTTTCTCACTGCCGGCCTTTTCACTCTTTGATTTTAATTTCATTCTGAGGTaGATCAAGGCCAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GLCGLLLFSLPAFSLFDFNFILR*IKAKAK
Trigger: TTTGGCCTTGGCCTTGATTCACCTCAGAATGAAATT...AAAATCAAAGAGTGAAAAGGCCGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAGAAGAACTGGGCCCCTaGCTTCTGATCAGTCTTATC +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPREELGP*LLISLI
Trigger: GATAAGACTGATCAGAAGTCAGGGGCCCAGTTCTTC...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GGTCCTTCTAGCAGTGTCACTATATCTATTCGATTAATTTTTGTCAAGACCGAAGTCTGCCTTCCAGTGTaGAGAACTGGGCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: GPSSSVTISIRLIFVKTEVCLPV*RTGPLT
Trigger: AGTCAGGGGCCCAGTTCTTCACACTGGAAGGCAGAC...TTCGGTCTTGACAAAAATTAATCGAATAGATATAGTGACACTGCTAGAAGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACACTACTATTGCCATCCTaGTATCTGTCCGTTCACATG +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTLLLPS*YLSVHM
Trigger: CATGTGAACGGACAGATATCAGGATGGCAATAGTAG...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp AAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGCAGTGTCCTCCTCTTCTAGGGTaGAGTCACTTGAGACCCCTA +
Preference number: 4 (lower is better)
Translates to: KVKTAMVSASVEFRFTQCPPLLG*SHLRPL
Trigger: TAGGGGTCTCAAGTGACTTCACCCTAGAAGAGGAGG...ACACTGCGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTGACTGGGGCCTTTTATaGGCACCATCCACCTCTAAA +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFDWGLL*APSTSK
Trigger: TTTAGAGGTGGATGGTGCTCATAAAAGGCCCCAGTC...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAAGACTTTCGGTAATTTaGTACCAATGCGCGTTGCCT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTRLSVI*YQCALP
Trigger: AGGCAACGCGCATTGGTATCAAATTACCGAAAGTCT...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR TCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAAGCAGGACAGAATGGTaGCATAAATGCAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRSRTEW*HKCKPL
Trigger: CAGGGGCTTGCATTTATGTCACCATTCTGTCCTGCT...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR TCA 90 bp CTGGGAAAGATGCTTGAACAAGGGGCACTGTGGTGCTGCTCAGAATTCCACCTTCATGCTCACTGGGTTTaGAAAAGGAAAATCATAGTA +
Preference number: 4 (lower is better)
Translates to: LGKMLEQGALWCCSEFHLHAHWV*KRKIIV
Trigger: TACTATGATTTTCCTTTTTCAAACCCAGTGAGCATG...AAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTCAAGCATCTTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTTGTTGCAAAGCCACTaGCAATGGTGTGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADILLQSH*QWCEAI
Trigger: GATGGCTTCACACCATTGGCAGTGGCTTTGCAACAA...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGCATTGTTGTCATTCTaGAGCAGCAGGGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYALLSF*SSRAAA
Trigger: AGCCGCCGCCCTGCTGCTGCAGAATGACAACAATGC...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGGGAGATGCCCCTTGCTaGAACAGCTGTTGTACTATG +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVGDAPC*NSCCTM
Trigger: CATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCC...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CAAAGTAGATTATCCGTGCATTTCTTCTGCATTGATAGTGAATCCTTACTGGGGCCCAGAAGTTGTGGCTaGATTTGGAGATGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: QSRLSVHFFCIDSESLLGPRSCG*IWRCPL
Trigger: CAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGG...CCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATACGGAAGCAATTCCTTaGCGGGTAACTGCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNTEAIP*RVTALA
Trigger: TGCCAACGCAGTTACCCGGCAAGGAATTGCTTCCGT...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp GGCCAGTTTATGTCTCTTTACCAAACGGCAGGTGATTCGAGTGGGGGCCGTACATTAACTTTTGCAGAATaGTGGAGCAGGAAATTAACA +
Preference number: 4 (lower is better)
Translates to: GQFMSLYQTAGDSSGGRTLTFAE*WSRKLT
Trigger: TGTTAATTTCCTGCTCCAGCATTCTGCAAAAGTTAA...TGTACGGCCCCCACTCGAATCACCTGCCGTTTGGTAAAGAGACATAAACTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp GTGCCCCCTGTAATGCTACAGAGAAGACGCAGATTGGGTGTAGTGTCCCCTTTGAATTGGGCTAAAAGTTaGTTTGTTTCCAAGGATCTT +
Preference number: 4 (lower is better)
Translates to: VPPVMLQRRRRLGVVSPLNWAKS*FVSKDL
Trigger: AAGATCCTTGGAAACAAAGCAACTTTTAGCCCAATT...CAAAGGGGACACTACACCCAATCTGCGTCTTCTCTGTAGCATTACAGGGGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAGGGGAGGGATCTTGTTaGTCCTGTACTCCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRGEGSC*SCTPFN
Trigger: ATTGAACGGAGTACAGGAGCAACAAGATCCCTCCCC...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTAACTGTGTCAGTGGCTaGACTGACCACAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRINCVSG*TDHRAH
Trigger: GTGAGCTCTGTGGTCAGTGCAGCCACTGACACAGTT...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACCTCACCATCCTTCTTTaGATCCTCAAACTTGTATTT +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHLTILL*ILKLVF
Trigger: AAATACAAGTTTGAGGATGCAAAGAAGGATGGTGAG...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCCTTGGCTTGCCATCTaGTGGAGAAGTCCTACTCAT +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFPWLAI*WRSPTH
Trigger: ATGAGTAGGACTTCTCCAGCAGATGGCAAGCCAAGG...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR GCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTCCTTCTCCCTGCTTTTaGTCAGACCCACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPPSPCF*SDPLDP
Trigger: GGGGTCCAGTGGGTCTGAGCAAAAGCAGGGAGAAGG...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp AGAATGGTTACAAATGATTGGCTTACTGAAAGGTGTCTACATCTTATAGCCAGTCCTTCTCCCTGCTTTTaGTCAGACCCACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: RMVTNDWLTERCLHLIASPSPCF*SDPLDP
Trigger: GGGGTCCAGTGGGTCTGAGCAAAAGCAGGGAGAAGG...ACTGGCTATAAGATGTAGACACCTTTCAGTAAGCCAATCATTTGTAACCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGCACTGCATTGCTAATTaGACACGCGCCAATCCGGAA +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTHCIAN*TRANPE
Trigger: TTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTTTGTGGGGCTGCTGCTaGTGCTCCTTCCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPLWGCC*CSFQEL
Trigger: GAGTTCCTGGAAGGAGCAGCAGCAGCAGCCCCACAA...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373827.6
CDS-3UTR CCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGTCTTTGGAAGCAAGGTaGAGAGCGTTCAACCCATTC +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRSLEAR*RAFNPF
Trigger: GAATGGGTTGAACGCTCTCCACCTTGCTTCCAAAGA...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGTCTGTGGCTAGGCTCTaGCTTGCACCATTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTSVARL*LAPLSR
Trigger: TCTTGACAATGGTGCAAGCCAGAGCCTAGCCACAGA...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTCGCGATATGAAGAGCTaGGAGACGCACTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIRDMKS*ETHFSF
Trigger: AAAGGAAAAGTGCGTCTCCCAGCTCTTCATATCGCG...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTATCTACCACCTGCTCGTaGCCACTCCTTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVSTTCS*PLLAPQ
Trigger: CTGTGGAGCAAGGAGTGGCCACGAGCAGGTGGTAGA...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CAGGAGATTGGCGACTTCAAGCTTTCCATATTTTGCTGCCACATGAAGAGGAGTAATGATCCCCTTGTGTaGCCATGTGCAATGGAGATA +
Preference number: 4 (lower is better)
Translates to: QEIGDFKLSIFCCHMKRSNDPLV*PCAMEI
Trigger: TATCTCCATTGCACATGGCCACACAAGGGGATCATT...ACTCCTCTTCATGTGGCAGCAAAATATGGAAAGCTTGAAGTCGCCAATCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATACGGGTACATTATGCTaGAGGAGAAGCTGGACGCAG +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNTGTLC*RRSWTQ
Trigger: CTGCGTCCAGCTTCTCCTCCAGCATAATGTACCCGT...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCGGTTACAGCTTGGATaGATGCACCGTGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLRLQLG*MHRVSE
Trigger: TTCTGAAACACGGTGCATCCATCCAAGCTGTAACCG...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGGGCAGCGATGTGCAGTaGCGTATAACCATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVGSDVQ*RITILC
Trigger: GCAAAGAATGGTTATACGCCACTGCACATCGCTGCC...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CTCAGATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCAGCATTTCAGGGGCATTaGCTTTACGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LRLVLPVLSVSSFATVLAAFQGH*LYELHH
Trigger: ATGATGAAGTTCGTAAAGCCAATGCCCCTGAAATGC...TGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474360.1
CDS-3UTR CCA 90 bp AGATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCAGCATTCCTTAAGGTCCTGTaGCCCAAGATATTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RLVLPVLSVSSFATVLAAFLKVL*PKIFVC
Trigger: ACAGACAAATATCTTGGGCCACAGGACCTTAAGGAA...TGCTGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTGGCCGTACACTTGCGTaGAGGAATGATGATTCTCAT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISGRTLA*RNDDSH
Trigger: ATGAGAATCATCATTCCTCCACGCAAGTGTACGGCC...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp ATCCCATCTTTGTCTGGGCGTCCACATGAGCCCCTTGGTTTACGAGGACTTCTGAATGGTCATTGTGATTaGTTTATGGAATTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: IPSLSGRPHEPLGLRGLLNGHCD*FMEFPS
Trigger: AGACGGAAATTCCATAAACCAATCACAATGACCATT...CAGAAGTCCTCGTAAACCAAGGGGCTCATGTGGACGCCCAGACAAAGATGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTCTCTGTACAGTTGCGTaGCTAACCCCACAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADILCTVA*LTPQFL
Trigger: TAGAAACTGTGGGGTTAGCCACGCAACTGTACAGAG...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp AGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGAGCTTCCGTGACTGCTaGAGCTCTAGCCAGGGTACC +
Preference number: 4 (lower is better)
Translates to: RIKVKTAMVSASVEFRFTSFRDC*SSSQGT
Trigger: GGTACCCTGGCTAGAGCTCCAGCAGTCACGGAAGCT...CGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTTTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCCTGAGTGGGGAAAATaGCATTGCAGTCGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFPEWGK*HCSRGR
Trigger: TCTACCACGACTGCAATGCCATTTTCCCCACTCAGG...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGCTGTCCTCAGTCTGTTaGGAGAGAACCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRLSSVC*ERTIFS
Trigger: AGAGAAGATGGTTCTCTCCCAACAGACTGAGGACAG...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTCATCTGGGAGGTCTATaGCCTTCTGCTGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIHLGGL*PSAVFL
Trigger: GAGAAAAACAGCAGAAGGCCATAGACCTCCCAGATG...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGAAAGCAATCCGCCTGGATaGTCCCCTTCTTTCACAACA +
Preference number: 4 (lower is better)
Translates to: STGSWKTLFSSAKLLVPESNPPG*SPSFTT
Trigger: TGTTGTGAAAGAAGGGGACCATCCAGGCGGATTGCT...TTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACAGCTCTCGCTCCTCCTaGAAGGCTGATCAAGCAATC +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYSSRSS*KADQAI
Trigger: GATTGCTTGATCAGCCTTCCAGGAGGAGCGAGAGCT...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CATCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGTCTTCTGGACTACCTTaGGGAGAAGGAGGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: HQQGHGKHCSHLQNFWCLSSGLP*GEGGCF
Trigger: AAAGCAACCTCCTTCTCCCCAAGGTAGTCCAGAAGA...CAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp AACGACGTGTTTCTTGAGGTACTTTCTTCCTCATCGGACAACTCGGACTGCATCCTTTCCAGTTCTTTCTaGTTGGAAGCCTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: NDVFLEVLSSSSDNSDCILSSSF*LEAFSA
Trigger: TGCTGAAAAGGCTTCCAACCAGAAAGAACTGGAAAG...GATGCAGTCCGAGTTGTCCGATGAGGAAGAAAGTACCTCAAGAAACACGTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CATCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGGAGAAAACTCTGCTGTaGTGGCAATGGAACACTCTG +
Preference number: 4 (lower is better)
Translates to: HQQGHGKHCSHLQNFWCLEKTLL*WQWNTL
Trigger: CAGAGTGTTCCATTGCCACCACAGCAGAGTTTTCTC...CAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCGGCCTTGCCTTTCTCTaGCTGCCCTTGCTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFGLAFL*LPLLLC
Trigger: ACACAAAAGCAAGGGCAGCCAGAGAAAGGCAAGGCC...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGTTCACATGGACTCTGTaGACCAGTCCTTCTACTGCT +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRFTWTL*TSPSTA
Trigger: AGCAGTAGAAGGACTGGTCCACAGAGTCCATGTGAA...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGATGGAATCTCTACACTaGTCAGGGCTGTCATCCAGT +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLMESLH*SGLSSS
Trigger: ACTGGATGACAGCCCTGACCAGTGTAGAGATTCCAT...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000612776.4
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTGGCTTGCCATCTGCTaGAGAAGTCCTACTCATCTT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISWLAIC*RSPTHL
Trigger: AAGATGAGTAGGACTTCTCCAGCAGATGGCAAGCCA...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCATGGAGGCTAAGCCTTaGCTTGCCATCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFMEAKP*LAICWR
Trigger: TCTCCAGCAGATGGCAAGCCAAGGCTTAGCCTCCAT...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGTTTGCTCAGACCCACTaGACCCCTCTTCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTFAQTH*TPLLHG
Trigger: TCCATGAAGAAGAGGGGTCCAGTGGGTCTGAGCAAA...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTTTTGCTCAGACCCACTaGACCCCTCTTCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFFAQTH*TPLLHG
Trigger: TCCATGAAGAAGAGGGGTCCAGTGGGTCTGAGCAAA...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTGTTCGCTGTTACGAGTaGCTCTTCTTTTCCACATGC +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIVRCYE*LFFSTC
Trigger: GCATGTGGAAAAGAAGAGCCACTCGTAACAGCGAAC...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp CCACAGAGGCACAAAGAGGACCAATGGGGTGGATTGGCCAGGACTCATATGACAAGGTCATCCAGTGTATaGTTTTTCATACATATGTCA +
Preference number: 4 (lower is better)
Translates to: PQRHKEDQWGGLARTHMTRSSSV*FFIHMS
Trigger: TGACATATGTATGAAAAACCATACACTGGATGACCT...TGTCATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCTTTGTGCCTCTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAGGCGGGGAGTGGCATaGAGCTCCAGGCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVRRGVA*SSRQTF
Trigger: GAAAGTTTGCCTGGAGCTCCATGCCACTCCCCGCCT...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR CCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGTGTAGTGCAACCCTGTaGGGGTTTCCAGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTCSATL*GFPVPL
Trigger: AAGTGGAACTGGAAACCCCCACAGGGTTGCACTACA...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTTGTAGTGCAACCCTGTaGGGGTTTCCAGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFCSATL*GFPVPL
Trigger: AAGTGGAACTGGAAACCCCCACAGGGTTGCACTACA...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTCTGGAAAGGGGTAGGTaGTGTGTAGTGCAACCCTGT +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRILERGR*CVVQPC
Trigger: ACAGGGTTGCACTACACACCACCTACCCCTTTCCAG...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTAAACGTGGGACTTCTTaGGAAAAAGTTCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRIKRGTS*EKVRPR
Trigger: CCGCGGCCGAACTTTTTCCCAAGAAGTCCCACGTTT...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373827.6
CDS-3UTR CCA 90 bp CCACAAAAGAAAATAGCAGAGCATGTGTATTTGCGTCGAGAACATTTCGCTAAACAACAACGAAGTACCTaGCAGAACGCGCTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: PQKKIAEHVYLRREHFAKQQRST*QNALRD
Trigger: GTCTCGGAGCGCGTTCTGCCAGGTACTTCGTTGTTG...TTTAGCGAAATGTTCTCGACGCAAATACACATGCTCTGCTATTTTCTTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGGGCGTGAAACCATTCTaGGATTGTGCATTGACATTG +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLGVKPF*DCALTL
Trigger: CAATGTCAATGCACAATCTCAGAATGGTTTCACGCC...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGATCCATTCTTGGTTTTTaGAAGAATGGGGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRSILGF*KNGGSS
Trigger: CGAGCTGCCCCCATTCTTTCAAAAACCAAGAATGGA...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAGATAAAGACGCTCCATaGTCCAAAAGGAACGCGGCC +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSDKDAP*SKRNAA
Trigger: GGCCGCGTTCCTTTTGGATCATGGAGCGTCTTTATC...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp CCATATGCTAAGCTGGTAACTAGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTTCACTCGATCTTCTTaGGCAGCCAAATGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PYAKLVTRIKVKTAMVSAFTRSS*AAKWSG
Trigger: CCCACTCCATTTGGCTGCTCAAGAAGATCGAGTGAA...GGCAGAGACCATGGCTGTTTTAACTTTTATTCTAGTTACCAGCTTAGCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTATTCCCATTCACAGTaGGTTCATTGGGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNYSHSQ*VHWGRR
Trigger: ACGCCTCCCCCAATGAACTCACTGTGAATGGGAATA...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp ATTGGTTCTCCCAGTTTTGTCAGTGAGCTCTTTTGCTACTGTGCTGGCAGCATGACCTTCTTCAACATCTaGGATATATTCGCCATCACT +
Preference number: 4 (lower is better)
Translates to: IGSPSFVSELFCYCAGSMTFFNI*DIFAIT
Trigger: AGTGATGGCGAATATATCTCAGATGTTGAAGAAGGT...CATGCTGCCAGCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGAGAACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474360.1
CDS-3UTR TCA 90 bp TTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACGCGTTTTTGCTGTCAAACTaGTGCTCCTTCCAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: FCSRCKTYPNLSWDWQNAFLLSN*CSFQVS
Trigger: TGAAACTTGGAAGGAGCATCAGTTTGACAGCAAAAA...CGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGACAGTTTCTAAAACTTaGTGGCAGTCTGCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMTVSKT*WQSASQ
Trigger: TTGGCTTGCAGACTGCCATCAAGTTTTAGAAACTGT...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp AGCTTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACACAGTTTCTAAAACTTaGTGGCAGTCTGCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SFCSRCKTYPNLSWDWQNTVSKT*WQSASQ
Trigger: TTGGCTTGCAGACTGCCATCAAGTTTTAGAAACTGT...GTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTTTGCAAACCGCTGTTTaGGGCAGTCCTTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFLQTAV*GSPFVV
Trigger: GACAACAAAAGGACTGCCTCAAACAGCGGTTTGCAA...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGGTGGTTGTGGTTATGTaGGTCTCTTCTTTAACACGC +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRVVVVM*VSSLTR
Trigger: GCGTGTTAAAGAAGAGACTCACATAACCACAACCAC...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp AGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGCTCTGCATGCTGGGCTaGGGTTTCAGCAGCAGACTT +
Preference number: 4 (lower is better)
Translates to: RIKVKTAMVSASVEFRFTLCMLG*GFSSRL
Trigger: AAGTCTGCTGCTGAAACCTCAGCCCAGCATGCAGAG...CGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTTTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGCTACTGGTAGGGCTTTaGGAAGAATATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMLLVGL*EEYSLP
Trigger: TGGCAAAGAATATTCTTCTCAAAGCCCTACCAGTAG...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp AGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGCTGCTTAAGGGAGGTTaGCTTGGCCTGTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RIKVKTAMVSASVEFRFTLLKGG*LGLFLL
Trigger: GAGGAGGAACAGGCCAAGTCAACCTCCCTTAAGCAG...CGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTTTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp AGCAGTGTCACTATATCTATTCGATTAATTTTTGTCAAGACCGAAGTTAAGGCACCCGGGAGGAACTGGTaGAGGTGGCTGCACTCTAAT +
Preference number: 4 (lower is better)
Translates to: SSVTISIRLIFVKTEVKAPGRNW*RWLHSN
Trigger: ATTAGAGTGCAGCCACCTTCACCAGTTCCTCCCGGG...TGCCTTAACTTCGGTCTTGACAAAAATTAATCGAATAGATATAGTGACACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp ATATCTATTCGATTAATTTTTGTCAAGACCGAAGTTAAGGCATCAGTTGTGGCACATCGCTTGAATCACTaGCGTCTGCCCCGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ISIRLIFVKTEVKASVVAHRLNH*RLPREE
Trigger: TTCCTCCCGGGGCAGACGTCAGTGATTCAAGCGATG...TGCCACAACTGATGCCTTAACTTCGGTCTTGACAAAAATTAATCGAATAGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGAGATTCGTCATCGCTTaGATCACTGACGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWRFVIA*ITDVCP
Trigger: GGGGCAGACGTCAGTGATTCAAGCGATGACGAATCT...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CATCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGCTACTATTGCCATCCTaGTATCTGTCCGTTCACATG +
Preference number: 4 (lower is better)
Translates to: HQQGHGKHCSHLQNFWCLLLLPS*YLSVHM
Trigger: CATGTGAACGGACAGATATCAGGATGGCAATAGTAG...CAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTCAACTAAGTCCCAGGTaGTCGGCTACTATTGCCATC +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRIQLSPR*SATIAI
Trigger: GATGGCAATAGTAGCCGATCACCTGGGACTTAGTTG...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp CAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGAAATATCAACTAAGTCCCAGGTaGTCGGCTACTATTGCCATC +
Preference number: 4 (lower is better)
Translates to: QGHGKHCSHLQNFWCLKYQLSPR*SATIAI
Trigger: GATGGCAATAGTAGCCGATCACCTGGGACTTAGTTG...ATATTTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTATATACAAGAATCAGTaGAGAGTCACCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFIYKNQ*RVTPTQ
Trigger: CTGGGTGGGGGTGACTCTTCACTGATTCTTGTATAT...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCTTTTCAAGAAGGCCTaGACAGATGTGGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLLFKKA*TDVGKA
Trigger: AGCTTTGCCCACATCTGTTCAGGCCTTCTTGAAAAG...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGGAAAATCCTCAGTCTTaGTGGAACTCCAGGATGATA +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMENPQS*WNSRMI
Trigger: TATCATCCTGGAGTTCCATCAAGACTGAGGATTTTC...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp AGTGCACATTTAAATACCTGGTGCCACACAGTAAATTGCCATTTTACCTTACAAGACAGGAGAATGGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SAHLNTWCHTVNCHFTLQDRRMA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCCATTCTCCTGTC...TTGTAAGGTAAAATGGCAATTTACTGTGTGGCACCAGGTATTTAAATGTGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459732.2
CDS-3UTR GCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGGCCAAAGATGCGATGTaGAATGCTGTGTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRAKDAM*NAVFPF
Trigger: GAAAGGAAACACAGCATTGCACATCGCATCTTTGGC...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGAGTGATGTCATTCCTTaGGGTGAAATCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVSDVIP*GEIHSS
Trigger: GCTGCTGTGGATTTCACCGCAAGGAATGACATCACT...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp AGAATGGTTACAAATGATTGGCTTACTGAAAGGTGTCTACATCTTATAGCCAGTCTCCTTGCTCCACAGTaGAGTGGTGTCAGACCATCC +
Preference number: 4 (lower is better)
Translates to: RMVTNDWLTERCLHLIASLLAPQ*SGVRPS
Trigger: GGATGGTCTGACACCACTGCACTGTGGAGCAAGGAG...ACTGGCTATAAGATGTAGACACCTTTCAGTAAGCCAATCATTTGTAACCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGTCCACGGGTACATTATaGTGGAGGAGAAGCTGGACG +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWSTGTL*WRRSWT
Trigger: CGTCCAGCTTCTCCTCCAGCATAATGTACCCGTGGA...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTACAGCTTGGATGGATaGACCGTGTTTCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLYSLDG*TVFQKE
Trigger: CTCCTTCTGAAACACGGTGCATCCATCCAAGCTGTA...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTTTGGAGATGCCCCTTaGTGCAACAGCTGTTGTACT +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLFGDAP*CNSCCT
Trigger: AGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAA...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAACCCAGAAGTTGTGGCTaGATTTGGAGATGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQPRSCG*IWRCPL
Trigger: CAAGGGGCATCTCCAAATGCAGCCACAACTTCTGGG...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGATCAGGCCGCTCTTATTaGTCAGGTTCACATTCGCAT +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRSGRSY*SGSHSH
Trigger: ATGCGAATGTGAACCTGAGCAATAAGAGCGGCCTGA...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACGCGAAGACATTTATTATATaGGTATGCCCCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: FCSRCKTYPNLSWDWQNAKTFII*VCPCCA
Trigger: AGCACAGCAGGGGCATACGCATATAATAAATGTCTT...CGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATGCCCATGTAACCCTCTaGAGGCAGGGAATCATCACC +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDAHVTL*RQGIIT
Trigger: GGTGATGATTCCCTGCCTGCAGAGGGTTACATGGGC...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp AGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGGGGGCACTGTGGTGCTaGTCAGAATTCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: RIKVKTAMVSASVEFRFTGALWC*SEFHLQ
Trigger: CTGAAGGTGGAATTCTGAGCAGCACCACAGTGCCCC...CGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTTTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTACCCTCTGGGAAAGATaGTTGAACAAGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRITLWER*LNKGHC
Trigger: ACAGTGCCCCTTGTTCAAGCATCTTTCCCAGAGGGT...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCACCCTCTGGGAAAGATaGTTGAACAAGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFTLWER*LNKGHC
Trigger: ACAGTGCCCCTTGTTCAAGCATCTTTCCCAGAGGGT...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGATTCAATTCTTTCAGATaGACCTTCACCGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRFNSFR*TFTAWW
Trigger: CCACCAGGCGGTGAAGGTGCATCTGAAAGAATTGAA...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGCATTTCACGCTCAACTaGTGTTTCCTCCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRHFTLN*CFLHCS
Trigger: ACTACAGTGGAGGAAACAGCAGTTGAGCGTGAAATG...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCAGCTGGCTTCAGAATaGCCTCTGTGTTCCAGATAT +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLQLASE*PLCSRY
Trigger: ATATCTGGAACACAGAGGGCATTCTGAAGCCAGCTG...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGAATGCTCCTTTTCTCACTaGCGGCCTTTTCACTCTTTG +
Preference number: 4 (lower is better)
Translates to: STGSWKTLFSSAKLLVPECSFSH*RPFHSL
Trigger: CAAAGAGTGAAAAGGCCGGCAGTGAGAAAAGGAGCA...TTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTGTGATCGGCTACTATTaGCATCCTGATATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFVIGYY*HPDICP
Trigger: CGGACAGATATCAGGATGGCAATAGTAGCCGATCAC...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAGACTGGAGGTCCATCTaGGGAATGCTCTATGTTCCC +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQDWRSI*GMLYVP
Trigger: GGGAACATAGAGCATTCCGCAGATGGACCTCCAGTC...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp GTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGAAACCTTCTCCCTTTTaGTCAGACCCACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: VNFYFLLTFLPRISQYWQKPSPF*SDPLDP
Trigger: GGGGTCCAGTGGGTCTGAGCAAAAGGGAGAAGGTTT...CTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612776.4
CDS-3UTR CCA 90 bp GAACAGAGAATAGCATGTAGTGAGCACTCCAGTTTTAGTGATGATGATCACAGTCAAAGCCACTGCCAATaGTGTGAAGCCATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: EQRIACSEHSSFSDDDHSQSHCQ*CEAILC
Trigger: ACAGAGGATGGCTTCACACCATTGGCAGTGGCTTTG...ACTGTGATCATCATCACTAAAACTGGAGTGCTCACTACATGCTATTCTCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATCAAAGCCACTGCCAATaGTGTGAAGCCATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNQSHCQ*CEAILC
Trigger: ACAGAGGATGGCTTCACACCATTGGCAGTGGCTTTG...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGCGCGATATGAAGAGCTaGGAGACGCACTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLRDMKS*ETHFSF
Trigger: AAAGGAAAAGTGCGTCTCCCAGCTCTTCATATCGCG...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GCTGTTGTACTATGTCTGCTTTCCCCAGTCGGGCTGAAATGTGGAGTGGTGTTTGAGATAATCCATTCTTaGTTTTTGAAAGAATGGGGG +
Preference number: 4 (lower is better)
Translates to: AVVLCLLSPVGLKCGVVFEIIHS*FLKEWG
Trigger: CCCCCATTCTTTCAAAAACCAAGAATGGATTATCTC...AAACACCACTCCACATTTCAGCCCGACTGGGGAAAGCAGACATAGTACAACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTAATGATCCCCTTGTGTaGCCATGTGCAATGGAGATA +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISNDPLV*PCAMEI
Trigger: TATCTCCATTGCACATGGCCACACAAGGGGATCATT...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GGAGACCATAACTTAAATTCATTAGTGCTATGTTTTAACCAGCTAAGACAGCCCACGGGTACATTATGCTaGAGGAGAAGCTGGACGCAG +
Preference number: 4 (lower is better)
Translates to: GDHNLNSLVLCFNQLRQPTGTLC*RRSWTQ
Trigger: CTGCGTCCAGCTTCTCCTCCAGCATAATGTACCCGT...GGGCTGTCTTAGCTGGTTAAAACATAGCACTAATGAATTTAAGTTATGGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCGGTTACAGCTTGGATaGATGCACCGTGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFRLQLG*MHRVSE
Trigger: TTCTGAAACACGGTGCATCCATCCAAGCTGTAACCG...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGTTTCTCCTCTCACATTaGTGGTGTTTGGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTFLLSH*WCLVRL
Trigger: GAGCCTCACCAAACACCACCAATGTGAGAGGAGAAA...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCAGTCGGGCTGAAATGTaGAGTGGTGTTTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFSRAEM*SGVWSS
Trigger: GGATGACCAAACACCACTCCACATTTCAGCCCGACT...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTGTACCCAGAAGTTGTaGCTGCATTTGGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRICTQKL*LHLEMP
Trigger: GGGCATCTCCAAATGCAGCCACAACTTCTGGGTACA...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAATGCTGCTCTTTGGATaGCACAAGGAGTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTMLLFG*HKEFFN
Trigger: ATTGAAGAACTCCTTGTGCCATCCAAAGAGCAGCAT...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAGGCCGTACACTTGCGTaGAGGAATGATGATTCTCAT +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRGRTLA*RNDDSH
Trigger: ATGAGAATCATCATTCCTCCACGCAAGTGTACGGCC...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGCAGCTTGTTGTCTaGCTTCCCGGATTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWQQLVV*LPGFLP
Trigger: CGGAAGAAATCCGGGAAGCCAGACAACAAGCTGCTG...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTAGACTTGTGAACATCTaGAGACACTGCCGACTTATG +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISRLVNI*RHCRLM
Trigger: CATAAGTCGGCAGTGTCTCCAGATGTTCACAAGTCT...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TGTTTTCTTATCTCTAGCAGACTTCGTTGTAACCGAAGGCTGGCCACCCCGGGATTACTCATGCTTGACTaGGACAATTTTTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: CFLISSRLRCNRRLATPGLLMLD*DNFCDS
Trigger: ACTATCACAAAAATTGTCCCAGTCAAGCATGAGTAA...TCCCGGGGTGGCCAGCCTTCGGTTACAACGAAGTCTGCTAGAGATAAGAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTAGAAACCTCGGGAATTaGGCTGGGTTTGCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRIRNLGN*AGFAWY
Trigger: ATACCAGGCAAACCCAGCCCAATTCCCGAGGTTTCT...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTGAGAAAACTCTGCTGTaGTGGCAATGGAACACTCTG +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLEKTLL*WQWNTL
Trigger: CAGAGTGTTCCATTGCCACCACAGCAGAGTTTTCTC...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GAACAGAGAATAGCATGTAGTGAGCACTCCAGTTTTAGTGATGATGATCACAGTAAAAGAGCGGTCAGCTaGCTTCAGAATGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: EQRIACSEHSSFSDDDHSKRAVS*LQNALC
Trigger: ACAGAGGGCATTCTGAAGCCAGCTGACCGCTCTTTT...ACTGTGATCATCATCACTAAAACTGGAGTGCTCACTACATGCTATTCTCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GGACTCTGTGGACTGCTCCTTTTCTCACTGCCGGCCTTTTCACTCTTTGATTTTACTTCAAGTTTACTTTaGCTAAAAGAGCGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLCGLLLFSLPAFSLFDFTSSLL*LKERSA
Trigger: AGCTGACCGCTCTTTTAGCCAAAGTAAACTTGAAGT...AAAATCAAAGAGTGAAAAGGCCGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTACCGCCAGCCCAAATaGCTTAGTTTCATCTTCCCG +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRIYRQPK*LSFIFP
Trigger: CGGGAAGATGAAACTAAGCCATTTGGGCTGGCGGTA...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCGGTACTTTCATCAGTTaGCGTTCTGGCTGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFGTFIS*RSGWRC
Trigger: ACAACGCCAGCCAGAACGCCAACTGATGAAAGTACC...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CCATATGCTAAGCTGGTAACTAGAATAAAAGTTAAAACAGCCATGGTCTCTGCCGATTGGTTTCTACAGTaGTGTCCCCTGACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PYAKLVTRIKVKTAMVSADWFLQ*CPLTVA
Trigger: AGCCACAGTCAGGGGACACCACTGTAGAAACCAATC...GGCAGAGACCATGGCTGTTTTAACTTTTATTCTAGTTACCAGCTTAGCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTGGCCTAACGCCCATCTaGCTATTGGCTGTATTTGAA +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLGLTPI*LLAVFE
Trigger: TTCAAATACAGCCAATAGCCAGATGGGCGTTAGGCC...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTATGGAATCTCTACACTaGTCAGGGCTGTCATCCAGT +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFMESLH*SGLSSS
Trigger: ACTGGATGACAGCCCTGACCAGTGTAGAGATTCCAT...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000612776.4
CDS-3UTR CCA 90 bp GTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGATGGAGGCTAAGCCTTaGCTTGCCATCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VNFYFLLTFLPRISQYWQMEAKP*LAICWR
Trigger: TCTCCAGCAGATGGCAAGCCAAGGCTTAGCCTCCAT...CTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTCATGCCATTAATGTGTaGAAGCAGCGAACACACACA +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISHAINV*KQRTHT
Trigger: TGTGTGTGTTCGCTGCTTCCACACATTAATGGCATG...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp CTTGGCTCCCCCATGAAATGCACAGAATTTATAAGCTGGGAGCTTGCAGGGCACAAACTGTTAACAGCATaGCTTCTTGTATATACACTG +
Preference number: 4 (lower is better)
Translates to: LGSPMKCTEFISWELAGHKLLTA*LLVYTL
Trigger: CAGTGTATATACAAGAAGCCATGCTGTTAACAGTTT...GTGCCCTGCAAGCTCCCAGCTTATAAATTCTGTGCATTTCATGGGGGAGCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACAGAGGACCAATGGGGTaGATTGGCCAGGACTCATAT +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYRGPMG*IGQDSY
Trigger: ATATGAGTCCTGGCCAATCCACCCCATTGGTCCTCT...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAGATTCACGCAGTGTATaGGTTGCAAATTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTDSRSV*VANSQS
Trigger: TGACTGTGAATTTGCAACCCATACACTGCGTGAATC...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGTTCACATGGACTCTGTaGACTCATTCCAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTFTWTL*THSRLS
Trigger: ACTGAGCCTGGAATGAGTCCACAGAGTCCATGTGAA...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGTTCACATGGACTCTGTaGACTCATTCCAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVFTWTL*THSRLS
Trigger: ACTGAGCCTGGAATGAGTCCACAGAGTCCATGTGAA...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTATCTGTCCGTTCACATaGACTCTGTGGACTCATTCC +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLICPFT*TLWTHS
Trigger: GGAATGAGTCCACAGAGTCCATGTGAACGGACAGAT...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATCTGTCCGTTCACATaGACTCTGTGGACTCATTCC +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVICPFT*TLWTHS
Trigger: GGAATGAGTCCACAGAGTCCATGTGAACGGACAGAT...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTTCTGCAGTTACGACTaGAGGTCCATCTGCGGAATG +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRIFCSYD*RSICGM
Trigger: CATTCCGCAGATGGACCTCCAGTCGTAACTGCAGAA...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp CATCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGGGTCTCACCACAATCTaGAAAAATTGGAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: HQQGHGKHCSHLQNFWCLGLTTI*KNWSLS
Trigger: AGAGAGGCTCCAATTTTTCCAGATTGTGGTGAGACC...CAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp GACCATAACTTAAATTCATTAGTGCTATGTTTTAACCAGCTAAGACAGCCCCAGAACTTATCTTGGGACTaGCAGAACGCGCTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: DHNLNSLVLCFNQLRQPQNLSWD*QNALRD
Trigger: GTCTCGGAGCGCGTTCTGCCAGTCCCAAGATAAGTT...CTGGGGCTGTCTTAGCTGGTTAAAACATAGCACTAATGAATTTAAGTTATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGCTTCCTTGTAAAAGGTaGTATCCTCAGGCACCTCTA +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTLPCKR*YPQAPL
Trigger: TAGAGGTGCCTGAGGATATCACCTTTTACAAGGAAG...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGGGCGTGAAACCATTCTaGGATTGTGCATTGACATTG +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLGVKPF*DCALTL
Trigger: CAATGTCAATGCACAATCTCAGAATGGTTTCACGCC...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp TCTTGGTTCCACAGTGACAATTGGGCTAAAAGTTGCTTTGTTTCCAAGGATCTTTCCATTCTTGGTTTTTaGAAGAATGGGGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SWFHSDNWAKSCFVSKDLSILGF*KNGGSS
Trigger: CGAGCTGCCCCCATTCTTTCAAAAACCAAGAATGGA...AAGATCCTTGGAAACAAAGCAACTTTTAGCCCAATTGTCACTGTGGAACCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCATGGACGCAGTTTAAATaGTCCCCTTGTGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSWTQFK*SPCVAM
Trigger: CATGGCCACACAAGGGGATCATTTAAACTGCGTCCA...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp TCTGTAGCAGGAGATTGGCGACTTCAAGCTTTCCATATTTTGCTGCCACATGAATTTGGTGAGGCTCCATaGTGCATTAGTTGTGATACA +
Preference number: 4 (lower is better)
Translates to: SVAGDWRLQAFHILLPHEFGEAP*CISCDT
Trigger: TGTATCACAACTAATGCATCATGGAGCCTCACCAAA...TTCATGTGGCAGCAAAATATGGAAAGCTTGAAGTCGCCAATCTCCTGCTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR TCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTATATTCGCCATCACTaGGCATTTCAGGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRIYIRHH*AFQGHW
Trigger: CCAATGCCCCTGAAATGCTCAGTGATGGCGAATATA...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGACCAGAAACCCAGAATaGATGGGGCTTGAAACAAGA +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTTRNPE*MGLETR
Trigger: TCTTGTTTCAAGCCCCATTCATTCTGGGTTTCTGGT...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGGAGGGATTTCCACTATaGCAGGGCCTAAAAATTGTG +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLEGFPL*QGLKIV
Trigger: CACAATTTTTAGGCCCTGTCATAGTGGAAATCCCTC...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTATGTGCTGGCAGAGTaGTATTTAAGTTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIYVLAE*YLSCKP
Trigger: CGGTTTGCAACTTAAATATCACTCTGCCAGCACATA...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGTATGTGCTGGCAGAGTaGTATTTAAGTTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLYVLAE*YLSCKP
Trigger: CGGTTTGCAACTTAAATATCACTCTGCCAGCACATA...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAAACTTGATAAGGAAGTaGAGCCTGACTTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQNLIRK*SLTWLA
Trigger: GGCCAGCCAAGTCAGGCTTCACTTCCTTATCAAGTT...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GAATCCTTACTGGGGACAACTCACTCCATTTGGCAACAATCTTTAATGGACAGGGTTCTGGCAAAACATTaGCTACAGAGTATACTGGCA +
Preference number: 4 (lower is better)
Translates to: ESLLGTTHSIWQQSLMDRVLAKH*LQSILA
Trigger: TGCCAGTATACTCTGTAGTCAATGTTTTGCCAGAAC...CCTGTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGTCCCCAGTAAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATGATGCTTCTTATCTaGCTCAATCTGGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVMMLLI*LNLVRI
Trigger: GATGCGGACCAGATTGAGTCAGATAAGAAGCATCAT...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTAATTTCATTCTGAGGTaGATCAAGGCCAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISNFILR*IKAKAK
Trigger: TTTGGCCTTGGCCTTGATTCACCTCAGAATGAAATT...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGCTACTATTGCCATCCTaGTATCTGTCCGTTCACATG +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLLLLPS*YLSVHM
Trigger: CATGTGAACGGACAGATATCAGGATGGCAATAGTAG...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGCTACTATTGCCATCCTaGTATCTGTCCGTTCACATG +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTLLLPS*YLSVHM
Trigger: CATGTGAACGGACAGATATCAGGATGGCAATAGTAG...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAACTAAGTCCCAGGTaGTCGGCTACTATTGCCATC +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWQLSPR*SATIAI
Trigger: GATGGCAATAGTAGCCGATCACCTGGGACTTAGTTG...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp TATGACCTCCTGCTTGATCGGAACCAAAGCATATCACATATACCTAAAGTCAAAGTTACTCTTCGAGCTTaGGCGCAGGACTCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: YDLLLDRNQSISHIPKVKVTLRA*AQDSRF
Trigger: AAACCTAGAGTCCTGCGCTCAAGCTCGAAGAGTAAC...TTTGACTTTAGGTATATGTGATATGCTTTGGTTCCGATCAAGCAGGAGGTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAGCTGGTTCTTCAACATaGCCAGATCCATGTATTTTT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTAGSST*PDPCIF
Trigger: AAAAATACATGGATCTGGTCATGTTGAAGAACCAGC...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATCTTCTAGAGATTTCTaGTATGCTGCTAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTSSRDF*YAASGD
Trigger: ATCACCACTAGCAGCATATCAGAAATCTCTAGAAGA...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp AAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGCAGTGTCTTATGATCCTTGACTaGCCGTTCGCTGTTACGAGT +
Preference number: 4 (lower is better)
Translates to: KVKTAMVSASVEFRFTQCLMILD*PFAVTS
Trigger: ACTCGTAACAGCGAACGGTCAGTCAAGGATCATAAG...ACACTGCGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATCTTATGATCCTTGACTaGCCGTTCGCTGTTACGAGT +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNLMILD*PFAVTS
Trigger: ACTCGTAACAGCGAACGGTCAGTCAAGGATCATAAG...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCCTTATGATCCTTGACTaGCCGTTCGCTGTTACGAGT +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFLMILD*PFAVTS
Trigger: ACTCGTAACAGCGAACGGTCAGTCAAGGATCATAAG...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTCCTCCTCTTCTAGGGTaGAGTCACTTGAGACCCCTA +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPPPLLG*SHLRPL
Trigger: TAGGGGTCTCAAGTGACTTCACCCTAGAAGAGGAGG...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAGACTGGGGCCTTTTATaGGCACCATCCACCTCTAAA +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSDWGLL*APSTSK
Trigger: TTTAGAGGTGGATGGTGCTCATAAAAGGCCCCAGTC...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGCTTGCAGGGCACATATaGATGTTAGAGATTATCTCT +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMLAGHI*MLEIIS
Trigger: AGAGATAATCTCTAACATTCATATGTGCCCTGCAAG...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTTCCTCTCAGCATCTTaGTATCCTCGTAGGCAATTG +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLFLSAS*YPRRQL
Trigger: CAATTGCCTACGAGGATATCAAGATGCTGAGAGGAA...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR TCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCATCTCTTCACCACCGCTaGATTCCTCTCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSSLHHR*IPLSIL
Trigger: CAAGATGCTGAGAGGAATTCAGCGGTGGTGAAGAGA...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR TCA 90 bp TCTTTGCTTCTTGCGACTTCCTCAAAATTCTCTTGTTGCTCTAAAGTTTTGTCCGCCTGGCTAACATGGTaGAACCCCATCTCTACTGAA +
Preference number: 4 (lower is better)
Translates to: SLLLATSSKFSCCSKVLSAWLTW*NPISTE
Trigger: TTCAGTAGAGATGGGGTTTCACCATGTTAGCCAGGC...GGACAAAACTTTAGAGCAACAAGAGAATTTTGAGGAAGTCGCAAGAAGCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTATATGGCTGTATCCCCTaGCACCAGCTGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVYGCIP*HQLEVS
Trigger: AGACACTTCCAGCTGGTGGCAGGGGATACAGCCATA...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CAAAGTAGATTATCCGTGCATTTCTTCTGCATTGATAGTGAATCCTTACTGGGGACATTGGCTTCTCTCTaGAGCAGCTCAGAAACAACC +
Preference number: 4 (lower is better)
Translates to: QSRLSVHFFCIDSESLLGTLASL*SSSETT
Trigger: GGTTGTTTCTGAGCTGCTGCAGAGAGAAGCCAATGT...CCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTACATTGGCTTCTCTCTaGAGCAGCTCAGAAACAACC +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRITLASL*SSSETT
Trigger: GGTTGTTTCTGAGCTGCTGCAGAGAGAAGCCAATGT...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGGCCAAAGATGCGATGTaGAATGCTGTGTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTAKDAM*NAVFPF
Trigger: GAAAGGAAACACAGCATTGCACATCGCATCTTTGGC...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTGCCCAGCCAAAGATaGGATGTGCAATGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNLPSQR*DVQCCV
Trigger: AACACAGCATTGCACATCGCATCTTTGGCTGGGCAA...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACTTGTTGCAAAGCCACTaGCAATGGTGTGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYLLQSH*QWCEAI
Trigger: GATGGCTTCACACCATTGGCAGTGGCTTTGCAACAA...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAACATTTCTACCACCTaGTCGTGGCCACTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSNISTT*SWPLLA
Trigger: AGCAAGGAGTGGCCACGAGCAGGTGGTAGAAATGTT...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGGGAGATGCCCCTTGCTaGAACAGCTGTTGTACTATG +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWGDAPC*NSCCTM
Trigger: CATAGTACAACAGCTGTTGCAGCAAGGGGCATCTCC...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGATTATCGTAATGTaGAGCTACATGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLLIIVM*SYMQWC
Trigger: ACACCACTGCATGTAGCTGCACATTACGATAATCAG...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATTCCTTGCCGGGTAACTaGGTTGGCATCAGCACCATA +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYSLPGN*VGISTI
Trigger: TATGGTGCTGATGCCAACGCAGTTACCCGGCAAGGA...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACTCAGGCCGCTCTTATTaGTCAGGTTCACATTCGCAT +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYSGRSY*SGSHSH
Trigger: ATGCGAATGTGAACCTGAGCAATAAGAGCGGCCTGA...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAAAGACATTTATTATATaGGTATGCCCCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTKTFII*VCPCCA
Trigger: AGCACAGCAGGGGCATACGCATATAATAAATGTCTT...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTGTGTCCCCGGTCATTaGATCTTCACCTTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFCVPGH*IFTFFN
Trigger: GTTGAAGAAGGTGAAGATGCAATGACCGGGGACACA...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp AAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGCAGTGTGTTCTTCAATCATCATaGTGTCCCGTGCATAGGAGC +
Preference number: 4 (lower is better)
Translates to: KVKTAMVSASVEFRFTQCVLQSS*CPVHRS
Trigger: GCTCCTATGCACGGGACAGCATGATGATTGAAGAAC...ACACTGCGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTGTGAATGTTAGATGCTaGTCTTTGGATGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLVNVRC*SLDGTR
Trigger: CCTTGTGCCATCCAAAGAGCAGCATCTAACATTCAC...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTGTGAATGTTAGATGCTaGTCTTTGGATGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFVNVRC*SLDGTR
Trigger: CCTTGTGCCATCCAAAGAGCAGCATCTAACATTCAC...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTAATCCGGGAAACCACTaGAAAATACTGGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFNPGNH*KILGEI
Trigger: GATTTCCCCCAGTATTTTGCAGTGGTTTCCCGGATT...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTACAAGGGGCACTGTGGTaGTGCTCAGAATTCCACCTT +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVQGALW*CSEFHL
Trigger: AAGGTGGAATTCTGAGCAGCACCACAGTGCCCCTTG...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp TCTTTGCTTCTTGCGACTTCCTCAAAATTCTCTTGTTGCTCTAAAGTTTTGTCCACCCTCTGGGAAAGATaGTTGAACAAGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SLLLATSSKFSCCSKVLSTLWER*LNKGHC
Trigger: ACAGTGCCCCTTGTTCAAGCATCTTTCCCAGAGGGT...GGACAAAACTTTAGAGCAACAAGAGAATTTTGAGGAAGTCGCAAGAAGCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGAATTCTCTGTACAGTTaGGTGGCTAACCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVNSLYS*VANPTV
Trigger: AACTGTGGGGTTAGCCACGCAACTGTACAGAGAATT...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTCTCTGTACAGTTaGGTGGCTAACCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTNSLYS*VANPTV
Trigger: AACTGTGGGGTTAGCCACGCAACTGTACAGAGAATT...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp GTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGCTCCAAAAGAGACCCTaGTGTAGTCACTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VNFYFLLTFLPRISQYWQLQKRP*CSHWRG
Trigger: ACCTCTCCAGTGACTACAGCAGGGTCTCTTTTGGAG...CTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAGCATGTCCAGGCATCTaGTTCACAGGTGATGAGAGA +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQACPGI*FTGDER
Trigger: TCTCTCATCACCTGTGAAGCAGATGCCTGGACATGC...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp GGACTCTGTGGACTGCTCCTTTTCTCACTGCCGGCCTTTTCACTCTTTGATTTTTTACAACAATTTCGTTaGTTTGGGCATGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: GLCGLLLFSLPAFSLFDFLQQFR*FGHAHL
Trigger: AAGATGAGCATGCCCAAAGCAACGAAATTGTTGTAA...AAAATCAAAGAGTGAAAAGGCCGGCAGTGAGAAAAGGAGCAGTCCACAGAGTCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTCCTCCACTGTAGTCTaGTTAAGGGAGGTTGACTTG +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNSSTVV*LREVDL
Trigger: CAAGTCAACCTCCCTTAAGCAGACTACAGTGGAGGA...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGAACATTTCACGCTCAACTaGTGTTTCCTCCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: STGSWKTLFSSAKLLVPEHFTLN*CFLHCS
Trigger: ACTACAGTGGAGGAAACAGCAGTTGAGCGTGAAATG...TTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTAGCTGGTACTTGTCATaGTCATCTTGCAGATTGACT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISSWYLS*SSCRLT
Trigger: AGTCAATCTGCAAGATGAGCATGACAAGTACCAGCT...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCATGTATCAGGGGTTGTTaGTGGAGAGCGGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSCIRGC*WRAVFY
Trigger: GTAGAAGACCGCTCTCCAGCAACAACCCCTGATACA...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTGTGGTACAAGTGGGTaGAGAATGTTCTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLCGTSG*RMFCQN
Trigger: GTTCTGACAGAACATTCTGCACCCACTTGTACCACA...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTGCTCCTTTTCTCACTaGCGGCCTTTTCACTCTTTG +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNCSFSH*RPFHSL
Trigger: CAAAGAGTGAAAAGGCCGGCAGTGAGAAAAGGAGCA...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAAAAATTCAGTTCCCTTaGCAGTTCTGTCCAACTAAG +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTKIQFP*QFCPTK
Trigger: CTTAGTTGGACAGAACTGGCAAGGGAACTGAATTTT...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGCTTGATGTCTCATTCTaGCAACCATCAACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTLDVSF*QPSTGS
Trigger: TGACCCTGTTGATGGTTGGCAGAATGAGACATCAAG...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGTGTATGGCTTCCATTTaGTTCAAATTTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMCMASI*FKFASF
Trigger: GAAGCTGGCAAATTTGAAGCAAATGGAAGCCATACA...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp GTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGCCTTGGCTTGCCATCTaGTGGAGAAGTCCTACTCAT +
Preference number: 4 (lower is better)
Translates to: VNFYFLLTFLPRISQYWQPWLAI*WRSPTH
Trigger: ATGAGTAGGACTTCTCCAGCAGATGGCAAGCCAAGG...CTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR GCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCACACTGCATTGCTAATTaGACACGCGCCAATCCGGAA +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSHCIAN*TRANPE
Trigger: TTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp AAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGCAGTGTGGGATACCATGCAGATaGAACCTAGCCCCATTCTTT +
Preference number: 4 (lower is better)
Translates to: KVKTAMVSASVEFRFTQCGIPCR*NLAPFF
Trigger: AAAGAATGGGGCTAGGTTGCATCTGCATGGTATCCC...ACACTGCGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGTTATTTGGGATACCATaGAGATGCAACCTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTLFGIP*RCNLAP
Trigger: TGGGGCTAGGTTGCATCTGCATGGTATCCCAAATAA...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAGGTCCATCTGCGGAATaGTCTATGTTCCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVGPSAE*SMFPWE
Trigger: TTCCCAGGGGAACATAGAGCATTCCGCAGATGGACC...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTGGTCCATCTGCGGAATaGTCTATGTTCCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPGPSAE*SMFPWE
Trigger: TTCCCAGGGGAACATAGAGCATTCCGCAGATGGACC...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAGACTGGAGGTCCATCTaGGGAATGCTCTATGTTCCC +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVDWRSI*GMLYVP
Trigger: GGGAACATAGAGCATTCCGCAGATGGACCTCCAGTC...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp CAGAGCATGTGTATTTGCGTCGAGAACATTTCGCTAAATTCACATCTTCATCCATGTGTCCCCGGTCATTaGATCTTCACTTTTCACCGT +
Preference number: 4 (lower is better)
Translates to: QSMCICVENISLNSHLHPCVPGH*IFTFHR
Trigger: ACGGTGAAAAGTGAAGATGCAATGACCGGGGACACA...TGGATGAAGATGTGAATTTAGCGAAATGTTCTCGACGCAAATACACATGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR GCA 90 bp CAGAGCATGTGTATTTGCGTCGAGAACATTTCGCTAAATTCACATCTTCATCCAGCTCTTTTGCTACTGTaGTGGCAGCATGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: QSMCICVENISLNSHLHPALLLL*WQHDCK
Trigger: TTTGCAGTCATGCTGCCAGCACAGTAGCAAAAGAGC...TGGATGAAGATGTGAATTTAGCGAAATGTTCTCGACGCAAATACACATGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR GCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAGGACTTTTGACCTTTTaGTCAGACCCACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVGLLTF*SDPLDP
Trigger: GGGGTCCAGTGGGTCTGAGCAAAAGGTCAAAAGTCC...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502769.5
CDS-3UTR CCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGGGCTGCCATATACAATaGCGTGAAACCATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVGCHIQ*RETILR
Trigger: TCTCAGAATGGTTTCACGCCATTGTATATGGCAGCC...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGAATGATCCCCTTGTGTaGCCATGTGCAATGGAGATA +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLNDPLV*PCAMEI
Trigger: TATCTCCATTGCACATGGCCACACAAGGGGATCATT...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACACGGGTACATTATGCTaGAGGAGAAGCTGGACGCAG +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYTGTLC*RRSWTQ
Trigger: CTGCGTCCAGCTTCTCCTCCAGCATAATGTACCCGT...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp AAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGCAGTGTTTTCTCCTCTCACATTaGTGGTGTTTGGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KVKTAMVSASVEFRFTQCFLLSH*WCLVRL
Trigger: GAGCCTCACCAAACACCACCAATGTGAGAGGAGAAA...ACACTGCGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGAGTTGTGGCTGCATTTaGAGATGCCCCTTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWSCGCI*RCPLLQ
Trigger: TTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACT...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp TCTTTGCTTCTTGCGACTTCCTCAAAATTCTCTTGTTGCTCTAAAGTTTTGTCCAGTTGTGGCTGCATTTaGAGATGCCCCTTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SLLLATSSKFSCCSKVLSSCGCI*RCPLLQ
Trigger: TTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACT...GGACAAAACTTTAGAGCAACAAGAGAATTTTGAGGAAGTCGCAAGAAGCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGATCTGTAGCAGGAGATTaGCGACTTCAAGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRSVAGD*RLQAFH
Trigger: ATGGAAAGCTTGAAGTCGCCAATCTCCTGCTACAGA...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCGTCGCTATGTCCATCTaGTTCTTTTTGGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFVAMSI*FFLAAM
Trigger: CATCGCTGCCAAAAAGAACCAGATGGACATAGCGAC...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATAGCAGCCAAATGGAGTaGGGTCAGGCCGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDSSQME*GQAALI
Trigger: AATAAGAGCGGCCTGACCCCACTCCATTTGGCTGCT...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGGCATTTCAGGGGCATTaGCTTTACGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLAFQGH*LYELHH
Trigger: ATGATGAAGTTCGTAAAGCCAATGCCCCTGAAATGC...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGTCTCTTTTCCTCTCATaGACCCAAAGTGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLSLFLS*TQSEGF
Trigger: AAATCCCTCACTTTGGGTCCATGAGAGGAAAAGAGA...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp AGAATGGTTACAAATGATTGGCTTACTGAAAGGTGTCTACATCTTATAGCCAGTGAACAAGGGGCACTGTaGTGCTGCTCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: RMVTNDWLTERCLHLIASEQGAL*CCSEFH
Trigger: GTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTC...ACTGGCTATAAGATGTAGACACCTTTCAGTAAGCCAATCATTTGTAACCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTGAACAAGGGGCACTGTaGTGCTGCTCAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPEQGAL*CCSEFH
Trigger: GTGGAATTCTGAGCAGCACCACAGTGCCCCTTGTTC...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp TTAAGGTCCTGTGGCCCAAGATATTTGTCTGTGTCCCCGGTCATTGCATCTTCATTCCACAGTGACAATTaGGCTAAAAGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LRSCGPRYLSVSPVIASSFHSDN*AKSCFV
Trigger: AACAAAGCAACTTTTAGCCCAATTGTCACTGTGGAA...TGAAGATGCAATGACCGGGGACACAGACAAATATCTTGGGCCACAGGACCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp CCATATGCTAAGCTGGTAACTAGAATAAAAGTTAAAACAGCCATGGTCTCTGCCCCCCTTTGTATCCATTaGATACACCTTCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PYAKLVTRIKVKTAMVSAPLCIH*IHLLLR
Trigger: CCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGG...GGCAGAGACCATGGCTGTTTTAACTTTTATTCTAGTTACCAGCTTAGCATATGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTCGACCACAGGGCTCTTaGCTGGTGTCTCTAATCTTG +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPRPQGS*LVSLIL
Trigger: CAAGATTAGAGACACCAGCCAAGAGCCCTGTGGTCG...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTACGACCACAGGGCTCTTaGCTGGTGTCTCTAATCTTG +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVRPQGS*LVSLIL
Trigger: CAAGATTAGAGACACCAGCCAAGAGCCCTGTGGTCG...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGACCTTCACCGCCTGGTaGAGAATGATAAACCATTCT +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVTFTAW*RMINHS
Trigger: AGAATGGTTTATCATTCTCCACCAGGCGGTGAAGGT...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CAAAGTAGATTATCCGTGCATTTCTTCTGCATTGATAGTGAATCCTTACTGGGGTGCACCTTCACCGCCTaGTGGAGAATGATAAACCAT +
Preference number: 4 (lower is better)
Translates to: QSRLSVHFFCIDSESLLGCTFTA*WRMINH
Trigger: ATGGTTTATCATTCTCCACCAGGCGGTGAAGGTGCA...CCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATGCGTGCCTTTTTCTCTaGGGACTGCAGTTCATCATT +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNACLFL*GLQFII
Trigger: AATGATGAACTGCAGTCCCCAGAGAAAAAGGCACGC...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTACTGGGATTCTGGACTaGCCATCTGACTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRITGILD*PSDFLS
Trigger: AGACAGAAAGTCAGATGGCCAGTCCAGAATCCCAGT...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GGTCCTTCTAGCAGTGTCACTATATCTATTCGATTAATTTTTGTCAAGACCGAATTCCCTCCCTCTGTCTaGGCTAGTGGTGCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: GPSSSVTISIRLIFVKTEFPPSV*ASGASF
Trigger: AAAACTCGCACCACTAGCCCAGACAGAGGGAGGGAA...TTCGGTCTTGACAAAAATTAATCGAATAGATATAGTGACACTGCTAGAAGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CCATATGCTAAGCTGGTAACTAGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTGGGCTGGGTTTGCCTaGTATATAAGCTATGAGCGA +
Preference number: 4 (lower is better)
Translates to: PYAKLVTRIKVKTAMVSAWAGFA*YISYER
Trigger: TCGCTCATAGCTTATATACCAGGCAAACCCAGCCCA...GGCAGAGACCATGGCTGTTTTAACTTTTATTCTAGTTACCAGCTTAGCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTGTCCGCATCCAGTGGTaGAGGAGGGGGAAATTCAAT +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPVRIQW*RRGKFN
Trigger: ATTGAATTTCCCCCTCCTCCACCACTGGATGCGGAC...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATACAGGTTCAGCCAGCTaGTACTTGTCATGCTCATCT +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNTGSAS*YLSCSS
Trigger: AGATGAGCATGACAAGTACCAGCTGGCTGAACCTGT...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTCTTTCCAGTTCTTTCTaGTTGGAAGCCTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISLSSSF*LEAFSA
Trigger: TGCTGAAAAGGCTTCCAACCAGAAAGAACTGGAAAG...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTGTGAAGTGGCCTTTATaGGAAGTTTGGATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIVKWPL*EVWIFA
Trigger: GGCAAAAATCCAAACTTCCCATAAAGGCCACTTCAC...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCATGGATGGAAGCTGTTTaGCCTTGCCTTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSWMEAV*PCLSLA
Trigger: AGCCAGAGAAAGGCAAGGCCAAACAGCTTCCATCCA...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CCATATGCTAAGCTGGTAACTAGAATAAAAGTTAAAACAGCCATGGTCTCTGCCCCTTTACTGGCAACTTaGATGGAAGCTGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PYAKLVTRIKVKTAMVSAPLLAT*MEAVWP
Trigger: AGGCCAAACAGCTTCCATCCAAGTTGCCAGTAAAGG...GGCAGAGACCATGGCTGTTTTAACTTTTATTCTAGTTACCAGCTTAGCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTGGCTTGCCATCTGCTaGAGAAGTCCTACTCATCTT +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNWLAIC*RSPTHL
Trigger: AAGATGAGTAGGACTTCTCCAGCAGATGGCAAGCCA...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACTGGCTTGCCATCTGCTaGAGAAGTCCTACTCATCTT +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYWLAIC*RSPTHL
Trigger: AAGATGAGTAGGACTTCTCCAGCAGATGGCAAGCCA...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAATGGAGGCTAAGCCTTaGCTTGCCATCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVMEAKP*LAICWR
Trigger: TCTCCAGCAGATGGCAAGCCAAGGCTTAGCCTCCAT...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATATGGAGGCTAAGCCTTaGCTTGCCATCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDMEAKP*LAICWR
Trigger: TCTCCAGCAGATGGCAAGCCAAGGCTTAGCCTCCAT...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATATGGAGGCTAAGCCTTaGCTTGCCATCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYMEAKP*LAICWR
Trigger: TCTCCAGCAGATGGCAAGCCAAGGCTTAGCCTCCAT...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGTTTGCTCAGACCCACTaGACCCCTCTTCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWFAQTH*TPLLHG
Trigger: TCCATGAAGAAGAGGGGTCCAGTGGGTCTGAGCAAA...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGACATGCCATTAATGTGTaGAAGCAGCGAACACACACA +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRHAINV*KQRTHT
Trigger: TGTGTGTGTTCGCTGCTTCCACACATTAATGGCATG...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGAGGCCTGAACAGATGTaGGCAAAGCTTACTTGTCAA +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLRPEQM*AKLTCQ
Trigger: TTGACAAGTAAGCTTTGCCCACATCTGTTCAGGCCT...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTTCACATGGACTCTGTaGACTCATTCCAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFFTWTL*THSRLS
Trigger: ACTGAGCCTGGAATGAGTCCACAGAGTCCATGTGAA...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAACACCTTCCTCTACCTaGACCTTTACAGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVTPSST*TFTGEC
Trigger: GCACTCTCCTGTAAAGGTTCAGGTAGAGGAAGGTGT...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTATTTACATGCCCCATaGAGGCAGCAACATGGATTG +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRIYLHAP*RQQHGL
Trigger: CAATCCATGTTGCTGCCTTCATGGGGCATGTAAATA...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTTTGGTGAGGCTCCATaGTGCATTAGTTGTGATACA +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLFGEAP*CISCDT
Trigger: TGTATCACAACTAATGCATCATGGAGCCTCACCAAA...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp CCACAAAAGAAAATAGCAGAGCATGTGTATTTGCGTCGAGAACATTTCGCTAAATATATTCGCCATCACTaGGCATTTCAGGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: PQKKIAEHVYLRREHFAKYIRHH*AFQGHW
Trigger: CCAATGCCCCTGAAATGCTCAGTGATGGCGAATATA...TTTAGCGAAATGTTCTCGACGCAAATACACATGCTCTGCTATTTTCTTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474360.1
CDS-3UTR TCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTACCAGAAACCCAGAATaGATGGGGCTTGAAACAAGA +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRITRNPE*MGLETR
Trigger: TCTTGTTTCAAGCCCCATTCATTCTGGGTTTCTGGT...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp CCATATGCTAAGCTGGTAACTAGAATAAAAGTTAAAACAGCCATGGTCTCTGCCGAGGGATTTCCACTATaGCAGGGCCTAAAAATTGTG +
Preference number: 4 (lower is better)
Translates to: PYAKLVTRIKVKTAMVSAEGFPL*QGLKIV
Trigger: CACAATTTTTAGGCCCTGTCATAGTGGAAATCCCTC...GGCAGAGACCATGGCTGTTTTAACTTTTATTCTAGTTACCAGCTTAGCATATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTAAGCCAAAATCTGGCTaGAACATTGGTTGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISKPKSG*NIGCKG
Trigger: TCCTTTACAACCAATGTTTCAGCCAGATTTTGGCTT...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTACAGTTTCTAAAACTTaGTGGCAGTCTGCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFTVSKT*WQSASQ
Trigger: TTGGCTTGCAGACTGCCATCAAGTTTTAGAAACTGT...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCAATCTCATCATCTTaGTCTGACTCTGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISSISSS*SDSVSF
Trigger: AAAGGAGACAGAGTCAGATCAAGATGATGAGATTGA...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373820.5
CDS-3UTR TCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAACTGAAAGGCCTTCATaGTGTCATGGACTGACATGG +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQTERPS*CHGLTW
Trigger: CCATGTCAGTCCATGACATCATGAAGGCCTTTCAGT...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGGCTCATCTTGCAGATTaGCTTCAATCATGTCAACCT +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVAHLAD*LQSCQP
Trigger: AGGTTGACATGATTGAAGTCAATCTGCAAGATGAGC...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTGCTGTGGTGTGGCAGTaGCCATACTTTTATCCCCTT +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPAVVWQ*PYFYPL
Trigger: AAGGGGATAAAAGTATGGTCACTGCCACACCACAGC...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACACATACTTCCTTGAGCTaGCTTTTCCTAACTTTAACT +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTHTSLS*LFLTLT
Trigger: AGTTAAAGTTAGGAAAAGTCAGCTCAAGGAAGTATG...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCCTACTATTGCCATCCTaGTATCTGTCCGTTCACATG +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFLLLPS*YLSVHM
Trigger: CATGTGAACGGACAGATATCAGGATGGCAATAGTAG...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACCAACTAAGTCCCAGGTaGTCGGCTACTATTGCCATC +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYQLSPR*SATIAI
Trigger: GATGGCAATAGTAGCCGATCACCTGGGACTTAGTTG...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGTTACTCTTCGAGCTTaGGCGCAGGACTCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYVTLRA*AQDSRF
Trigger: AAACCTAGAGTCCTGCGCTCAAGCTCGAAGAGTAAC...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000612776.4
CDS-3UTR TCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACGTTACTCTTCGAGCTTaGGCGCAGGACTCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYVTLRA*AQDSRF
Trigger: AAACCTAGAGTCCTGCGCTCAAGCTCGAAGAGTAAC...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000612776.4
CDS-3UTR TCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTCTCCTTTGAGATATaGGGTAATGGAATCTCTACA +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTFSFEI*GNGIST
Trigger: TGTAGAGATTCCATTACCTCATATCTCAAAGGAGAA...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGAAAACTTATGATCCTTaGCTGACCGTTCGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLKTYDP*LTVRCY
Trigger: GTAACAGCGAACGGTCAGTCAAGGATCATAAGTTTT...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATATACAAGAATCAGTaGAGAGTCACCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSIYKNQ*RVTPTQ
Trigger: CTGGGTGGGGGTGACTCTTCACTGATTCTTGTATAT...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp CAAAGTAGATTATCCGTGCATTTCTTCTGCATTGATAGTGAATCCTTACTGGGGAAAGCAACTGCATGTTaGTGGTTCCTAGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QSRLSVHFFCIDSESLLGKATAC*WFLEVP
Trigger: TGGCACTTCTAGGAACCATCAACATGCAGTTGCTTT...CCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCACAGGATGATACCAAATaGACAGCGAGGAACATCAGG +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSQDDTK*TARNIR
Trigger: CCTGATGTTCCTCGCTGTTCATTTGGTATCATCCTG...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCAGGTTAAGATCCTTTTaGCCACTTCGCAGACATCCT +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFRLRSF*PLRRHP
Trigger: AGGATGTCTGCGAAGTGGTCAAAAGGATCTTAACCT...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR TCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTATCCTCGTAGGCAATTaGGGAATTATACATCTTTCC +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISILVGN*GIIHLS
Trigger: GGAAAGATGTATAATTCCTCAATTGCCTACGAGGAT...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR TCA 90 bp CCACAAAAGAAAATAGCAGAGCATGTGTATTTGCGTCGAGAACATTTCGCTAAATCCCAGTTTTGTCAGTaGGCTCTTTTGCTACTGTGC +
Preference number: 4 (lower is better)
Translates to: PQKKIAEHVYLRREHFAKSQFCQ*ALLLLC
Trigger: GCACAGTAGCAAAAGAGCTCACTGACAAAACTGGGA...TTTAGCGAAATGTTCTCGACGCAAATACACATGCTCTGCTATTTTCTTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR GCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAACCTTTACAGGAGAGTaGAGCCATCGTAATGCATTT +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRTFTGE*SHRNAF
Trigger: AAATGCATTACGATGGCTGCACTCTCCTGTAAAGGT...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGTTGCCCAGCCAAAGATaGGATGTGCAATGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWLPSQR*DVQCCV
Trigger: AACACAGCATTGCACATCGCATCTTTGGCTGGGCAA...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGAGTGATGTCATTCCTTaGGGTGAAATCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWSDVIP*GEIHSS
Trigger: GCTGCTGTGGATTTCACCGCAAGGAATGACATCACT...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp TCTGTAGCAGGAGATTGGCGACTTCAAGCTTTCCATATTTTGCTGCCACATGAAGATACAATATTTACATaGCCCATGAAGGCAGCAACA +
Preference number: 4 (lower is better)
Translates to: SVAGDWRLQAFHILLPHEDTIFT*PMKAAT
Trigger: TGTTGCTGCCTTCATGGGGCATGTAAATATTGTATC...TTCATGTGGCAGCAAAATATGGAAAGCTTGAAGTCGCCAATCTCCTGCTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATTTGGAGATGCCCCTTaGTGCAACAGCTGTTGTACT +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQFGDAP*CNSCCT
Trigger: AGTACAACAGCTGTTGCAGCAAGGGGCATCTCCAAA...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGTTTGGCATTAACTTTTaGAGAATGCTGGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLFGINF*RMLEQE
Trigger: TTCCTGCTCCAGCATTCTGCAAAAGTTAATGCCAAA...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAACATCATGCTGTCCCGTaGATAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQHHAVP*IGASVQ
Trigger: TTGAACAGAAGCTCCTATGCACGGGACAGCATGATG...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCATCATGCTGTCCCGTaGATAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWHHAVP*IGASVQ
Trigger: TTGAACAGAAGCTCCTATGCACGGGACAGCATGATG...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGGTTCTTCAATCATCATaGTGTCCCGTGCATAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWVLQSS*CPVHRS
Trigger: GCTCCTATGCACGGGACAGCATGATGATTGAAGAAC...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp TCTTTGCTTCTTGCGACTTCCTCAAAATTCTCTTGTTGCTCTAAAGTTTTGTCCGTTCTTCAATCATCATaGTGTCCCGTGCATAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLLATSSKFSCCSKVLSVLQSS*CPVHRS
Trigger: GCTCCTATGCACGGGACAGCATGATGATTGAAGAAC...GGACAAAACTTTAGAGCAACAAGAGAATTTTGAGGAAGTCGCAAGAAGCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp AGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGACCCTCTGGGAAAGATaGTTGAACAAGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: RIKVKTAMVSASVEFRFTTLWER*LNKGHC
Trigger: ACAGTGCCCCTTGTTCAAGCATCTTTCCCAGAGGGT...CGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTTTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGACTTTGTCATCTGTCATaGAGAAACATCGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRLCHLS*RNIARK
Trigger: CTTCCTTGCGATGTTTCTGCATGACAGATGACAAAG...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTGAACCTCAATATCTTTaGTTCTTGCGACTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIEPQYL*FLRLPQ
Trigger: TTGAGGAAGTCGCAAGAAGCAAAGATATTGAGGTTC...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCATTCGGAGGCGGCTTTTaGTTTTACTTGCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSFGGGF*FYLHSL
Trigger: GAGAGAGTGCAAGTAAAAGCAAAAGCCGCCTCCGAA...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGATGTTCAAACAGACCTaGCAGTTCTTTGGAAGGATC +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTMFKQT*QFFGRI
Trigger: GATCCTTCCAAAGAACTGGCAGGTCTGTTTGAACAT...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCGCCCATCTGGTGCTTTaGTCTGTGAAATACTTCCTT +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFAHLVL*SVKYFL
Trigger: AAGGAAGTATTTCACAGAGCAAAGCACCAGATGGGC...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGAAATATAAGTCTTTAGCCTGCTaGTCAGAAAAAGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QGHGKHCSHLQNFWCLKYKSLAC*SEKESG
Trigger: GCCTGACTCTTTTTCTGAGCAGCAGGCTAAAGACTT...ATATTTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCGCCAAGTCTTTAGCCTaGTGCTCAGAAAAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFAKSLA*CSEKES
Trigger: TGACTCTTTTTCTGAGCAGCAGGCTAAAGACTTGGC...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TACTATTGCCATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTATCTCCTTTTCATATTaGTTCCCCACTTGTACAAAA +
Preference number: 4 (lower is better)
Translates to: YYCHPDICPFTWTLWTAPISFSY*FPTCTK
Trigger: TTTTGTACAAGTGGGGAAGCAATATGAAAAGGAGAT...AGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACTGGGGAGAAGGAGGTTaGTTTTGCTGTCTAGTTGTA +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYWGEGG*FCCLVV
Trigger: TACAACTAGACAGCAAAAGCAACCTCCTTCTCCCCA...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TACTATTGCCATCCTGATATCTGTCCGTTCACATGGACTCTGTGGACTGCTCCTTCTAGAAAGGATACTTaGTCTAGAGTATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: YYCHPDICPFTWTLWTAPSRKDT*SRVSSS
Trigger: AGAAGATGATACTCTAGAGCAAGTATCCTTTCTAGA...AGGAGCAGTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp TATGACCTCCTGCTTGATCGGAACCAAAGCATATCACATATACCTAAAGTCAAAACTGGTGAAGGTGGCTaGACTCTAATGACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: YDLLLDRNQSISHIPKVKTGEGG*TLMTGS
Trigger: TGAACCTGTCATTAGAGTGCAGCCACCTTCACCAGT...TTTGACTTTAGGTATATGTGATATGCTTTGGTTCCGATCAAGCAGGAGGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCTTGCTCATGTCAATTaGACCACTGCGAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWLAHVN*TTASHL
Trigger: GAGATGACTCGCAGTGGTGCAATTGACATGAGCAAG...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp GTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGGTGATCGGCTACTATTaGCATCCTGATATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: VNFYFLLTFLPRISQYWQVIGYY*HPDICP
Trigger: CGGACAGATATCAGGATGGCAATAGTAGCCGATCAC...CTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTAAAATTCAGTTCCCTTaGCAGTTCTGTCCAACTAAG +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIKIQFP*QFCPTK
Trigger: CTTAGTTGGACAGAACTGGCAAGGGAACTGAATTTT...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGAAAATTCAGTTCCCTTaGCAGTTCTGTCCAACTAAG +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLKIQFP*QFCPTK
Trigger: CTTAGTTGGACAGAACTGGCAAGGGAACTGAATTTT...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp AGAATGGTTACAAATGATTGGCTTACTGAAAGGTGTCTACATCTTATAGCCAGTCCTTGGCTTGCCATCTaGTGGAGAAGTCCTACTCAT +
Preference number: 4 (lower is better)
Translates to: RMVTNDWLTERCLHLIASPWLAI*WRSPTH
Trigger: ATGAGTAGGACTTCTCCAGCAGATGGCAAGCCAAGG...ACTGGCTATAAGATGTAGACACCTTTCAGTAAGCCAATCATTTGTAACCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTACCTTGGCTTGCCATCTaGTGGAGAAGTCCTACTCAT +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVPWLAI*WRSPTH
Trigger: ATGAGTAGGACTTCTCCAGCAGATGGCAAGCCAAGG...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR GCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATCCTTGGCTTGCCATCTaGTGGAGAAGTCCTACTCAT +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYPWLAI*WRSPTH
Trigger: ATGAGTAGGACTTCTCCAGCAGATGGCAAGCCAAGG...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR GCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTCTTGATGTCTCATTCTaGCAACTCAGACATACATTC +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISLDVSF*QLRHTF
Trigger: GAATGTATGTCTGAGTTGGCAGAATGAGACATCAAG...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp GAACAGAGAATAGCATGTAGTGAGCACTCCAGTTTTAGTGATGATGATCACAGTGAAACAACCTCTACATaGCCTTCTTTGGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: EQRIACSEHSSFSDDDHSETTST*PSLEAR
Trigger: CCTTGCTTCCAAAGAAGGCCATGTAGAGGTTGTTTC...ACTGTGATCATCATCACTAAAACTGGAGTGCTCACTACATGCTATTCTCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTGAAACAACCTCTACATaGCCTTCTTTGGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRIETTST*PSLEAR
Trigger: CCTTGCTTCCAAAGAAGGCCATGTAGAGGTTGTTTC...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp AGAATAAAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGTCTGTGGCTAGGCTCTaGCTTGCACCATTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: RIKVKTAMVSASVEFRFTSVARL*LAPLSR
Trigger: TCTTGACAATGGTGCAAGCCAGAGCCTAGCCACAGA...CGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTTTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGTATCCAAGAGAACCTTaGCAACTTTGTAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVYPREP*QLCNGH
Trigger: GTGGCCATTACAAAGTTGCCAAGGTTCTCTTGGATA...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTGACTCGGTTACAGCTTaGATGGATGCACCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPDSVTA*MDAPCF
Trigger: GAAACACGGTGCATCCATCCAAGCTGTAACCGAGTC...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATAGTTGTGGCTGCATTTaGAGATGCCCCTTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYSCGCI*RCPLLQ
Trigger: TTGCAGCAAGGGGCATCTCCAAATGCAGCCACAACT...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTCTGTAGCAGGAGATTaGCGACTTCAAGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNSVAGD*RLQAFH
Trigger: ATGGAAAGCTTGAAGTCGCCAATCTCCTGCTACAGA...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTGGCAGCGATGTGCAGTaGCGTATAACCATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPGSDVQ*RITILC
Trigger: GCAAAGAATGGTTATACGCCACTGCACATCGCTGCC...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAGTCGCTATGTCCATCTaGTTCTTTTTGGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQVAMSI*FFLAAM
Trigger: CATCGCTGCCAAAAAGAACCAGATGGACATAGCGAC...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACGCAGCCCACATGCAGTaGTGTGTATCCCATCTTTGT +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYAAHMQ*CVSHLC
Trigger: ACAAAGATGGGATACACACCACTGCATGTGGGCTGC...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATGCAGCCCACATGCAGTaGTGTGTATCCCATCTTTGT +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDAAHMQ*CVSHLC
Trigger: ACAAAGATGGGATACACACCACTGCATGTGGGCTGC...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp AGCTTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACACTTTTGCAGAATGCTaGAGCAGGAAATTAACAATC +
Preference number: 4 (lower is better)
Translates to: SFCSRCKTYPNLSWDWQNTFAEC*SRKLTI
Trigger: GATTGTTAATTTCCTGCTCCAGCATTCTGCAAAAGT...GTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTGCATTTCAGGGGCATTaGCTTTACGAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLAFQGH*LYELHH
Trigger: ATGATGAAGTTCGTAAAGCCAATGCCCCTGAAATGC...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGTTCCTTAAGGTCCTGTaGCCCAAGATATTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVFLKVL*PKIFVC
Trigger: ACAGACAAATATCTTGGGCCACAGGACCTTAAGGAA...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATGCTGCTCTTTGGATaGCACAAGGAGTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVMLLFG*HKEFFN
Trigger: ATTGAAGAACTCCTTGTGCCATCCAAAGAGCAGCAT...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAGGCCGTACACTTGCGTaGAGGAATGATGATTCTCAT +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQGRTLA*RNDDSH
Trigger: ATGAGAATCATCATTCCTCCACGCAAGTGTACGGCC...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCATTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp GTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: VNFYFLLTFLPRISQYWQFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...CTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp TTGTATATACACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGGAATTTCCGTCTTCTTaGTTCCACAGTGACAATTGG +
Preference number: 4 (lower is better)
Translates to: LYIHCIANCTRANPEMKVEFPSS*FHSDNW
Trigger: CCAATTGTCACTGTGGAACCAAGAAGACGGAAATTC...CACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTGTATATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp TTCTGTTCAAGGTGTAAGACCTATCCGAACTTATCTTGGGACTGGCAGAACGCGATTGTGATTGGTTTATaGAATTTCCGTCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: FCSRCKTYPNLSWDWQNAIVIGL*NFRLLG
Trigger: ACCAAGAAGACGGAAATTCCATAAACCAATCACAAT...CGCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGGTCTTACACCTTGAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTCCTCCTTTGGTAAGTaGGGCCAAATTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLSSFGK*GQISIT
Trigger: TGTTATGGAAATTTGGCCCCACTTACCAAAGGAGGA...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGATCCTCCTTTGGTAAGTaGGGCCAAATTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRSSFGK*GQISIT
Trigger: TGTTATGGAAATTTGGCCCCACTTACCAAAGGAGGA...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGTGTCCAGGACTGGTATaGTCTTGTAGAAAAGAATGG +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLCPGLV*SCRKEW
Trigger: CCATTCTTTTCTACAAGACCATACCAGTCCTGGACA...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTATTCTCCCTTCCTTTaGGAGTTCAGGTTGGAATGG +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNYSPFL*EFRLEW
Trigger: CCATTCCAACCTGAACTCCCAAAGGAAGGGAGAATA...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATCAGTGGGCTCAGCTTaGTTACCTTTTTCGATGTGG +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQSVGSA*LPFSMW
Trigger: CCACATCGAAAAAGGTAACCAAGCTGAGCCCACTGA...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTCTTTGGCTTCCACTGTaGACTTGCTGTCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPLWLPL*TCCPQS
Trigger: AGACTGAGGACAGCAAGTCCACAGTGGAAGCCAAAG...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACATCAAGCAATCCGCCTaGATGGTCCCCTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYIKQSA*MVPFFH
Trigger: GTGAAAGAAGGGGACCATCCAGGCGGATTGCTTGAT...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAAATCAGGAGATTTGGTaGGGGAGGTTTCGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQNQEIW*GRFRFP
Trigger: AGGAAACCGAAACCTCCCCCACCAAATCTCCTGATT...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGCAGTGTAAGAATCAGGAGATTTaGTGGGGGAGGTTTCGGTTT +
Preference number: 4 (lower is better)
Translates to: KVKTAMVSASVEFRFTQCKNQEI*WGRFRF
Trigger: AAACCGAAACCTCCCCCACCAAATCTCCTGATTCTT...ACACTGCGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GGTCCTTCTAGCAGTGTCACTATATCTATTCGATTAATTTTTGTCAAGACCGAAAAAAGAGCGGTCAGCTaGCTTCAGAATGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GPSSSVTISIRLIFVKTEKRAVS*LQNALC
Trigger: ACAGAGGGCATTCTGAAGCCAGCTGACCGCTCTTTT...TTCGGTCTTGACAAAAATTAATCGAATAGATATAGTGACACTGCTAGAAGGACC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp GAACAGAGAATAGCATGTAGTGAGCACTCCAGTTTTAGTGATGATGATCACAGTGGCCTTCTTTCTTCATaGTCATGGTGGATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: EQRIACSEHSSFSDDDHSGLLSS*SWWMQK
Trigger: TTTCTGCATCCACCATGACCATGAAGAAAGAAGGCC...ACTGTGATCATCATCACTAAAACTGGAGTGCTCACTACATGCTATTCTCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CCATATGCTAAGCTGGTAACTAGAATAAAAGTTAAAACAGCCATGGTCTCTGCCAAATCATGTTTTTCATaGGGCCTAACGCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PYAKLVTRIKVKTAMVSAKSCFS*GLTPIW
Trigger: CCAGATGGGCGTTAGGCCCCATGAAAAACATGATTT...GGCAGAGACCATGGCTGTTTTAACTTTTATTCTAGTTACCAGCTTAGCATATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GAACAGAGAATAGCATGTAGTGAGCACTCCAGTTTTAGTGATGATGATCACAGTGGATCTTACCTTTACTaGCAACTTGGATGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EQRIACSEHSSFSDDDHSGSYLY*QLGWKL
Trigger: CAGCTTCCATCCAAGTTGCCAGTAAAGGTAAGATCC...ACTGTGATCATCATCACTAAAACTGGAGTGCTCACTACATGCTATTCTCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATATCTGTCCGTTCACATaGACTCTGTGGACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDICPFT*TLWTSP
Trigger: AGGACTGGTCCACAGAGTCCATGTGAACGGACAGAT...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGGGAGTGATTTCTGTATaGCTTCCATTTGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMGVISV*LPFASN
Trigger: ATTTGAAGCAAATGGAAGCCATACAGAAATCACTCC...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAGTTCGCTGTTACGAGTaGCTCTTCTTTTCCACATGC +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQVRCYE*LFFSTC
Trigger: GCATGTGGAAAAGAAGAGCCACTCGTAACAGCGAAC...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCAAAAACAAGCTCTGTaGGCTAAAAGCAACTGCATG +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLQKQAL*AKSNCM
Trigger: CATGCAGTTGCTTTTAGCCCACAGAGCTTGTTTTTG...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGACAACTCACTCCATTTaGCAACAATCTTTAATGGAC +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMTTHSI*QQSLMD
Trigger: GTCCATTAAAGATTGTTGCCAAATGGAGTGAGTTGT...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTATAGTGAATCCTTACTaGGGACAACTCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISIVNPY*GQLTPF
Trigger: AAATGGAGTGAGTTGTCCCCAGTAAGGATTCACTAT...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTAAAGCTCCTTCTGATTaGATTAAAAACTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EAANTHTLLGEFLLPADIKAPSD*IKNSSG
Trigger: GCCAGAGGAGTTTTTAATCCAATCAGAAGGAGCTTT...AATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR CCA 90 bp GTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGATCTGTCCGTTCACATaGACTCTGTGGACTCATTCC +
Preference number: 4 (lower is better)
Translates to: VNFYFLLTFLPRISQYWQICPFT*TLWTHS
Trigger: GGAATGAGTCCACAGAGTCCATGTGAACGGACAGAT...CTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp CCACAAAAGAAAATAGCAGAGCATGTGTATTTGCGTCGAGAACATTTCGCTAAACTTTTGCTACTGTGCTaGCAGCATGACTGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: PQKKIAEHVYLRREHFAKLLLLC*QHDCKV
Trigger: CACTTTGCAGTCATGCTGCCAGCACAGTAGCAAAAG...TTTAGCGAAATGTTCTCGACGCAAATACACATGCTCTGCTATTTTCTTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR CCA 90 bp CTGGTGCCACACAGTAAATTGCCATTTTACCTTACAATTTGTATACTATATGCTGTAATTCCAGCACTTTaGGAGGCAGAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LVPHSKLPFYLTICILYAVIPAL*EAEVGG
Trigger: TCCACCCACCTCTGCCTCCCAAAGTGCTGGAATTAC...AGCATATAGTATACAAATTGTAAGGTAAAATGGCAATTTACTGTGTGGCACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459732.2
CDS-3UTR TCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAGCAACGTGGCTACATTaGTATTTCCATAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQATWLH*YFHSEQ
Trigger: CTGCTCACTATGGAAATATCAATGTAGCCACGTTGC...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTTCCATTCTTGGTTTTTaGAAGAATGGGGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPSILGF*KNGGSS
Trigger: CGAGCTGCCCCCATTCTTTCAAAAACCAAGAATGGA...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGTATTTTGCTGCCACATaGAGAGGAGTAAATCCTTTC +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLYFAAT*RGVNPF
Trigger: GAAAGGATTTACTCCTCTTCATGTGGCAGCAAAATA...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGGGGGAGGCGTTGTTCTaGAGTAAGACATTTATTATA +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTGEALF*SKTFII
Trigger: TATAATAAATGTCTTACTTCAGAACAACGCCTCCCC...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTATATATTCGCCATCACTaGGCATTTCAGGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVYIRHH*AFQGHW
Trigger: CCAATGCCCCTGAAATGCTCAGTGATGGCGAATATA...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTATTGCAAACCGCTGTTTaGGGCAGTCCTTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVLQTAV*GSPFVV
Trigger: GACAACAAAAGGACTGCCTCAAACAGCGGTTTGCAA...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATTTGCAAACCGCTGTTTaGGGCAGTCCTTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYLQTAV*GSPFVV
Trigger: GACAACAAAAGGACTGCCTCAAACAGCGGTTTGCAA...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATAAAGAATGGCTTGTATaGGTAAGTGGTGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDKEWLV*VSGGEG
Trigger: TCCCTCCCCACCACTTACTCATACAAGCCATTCTTT...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCGCCTAATGTGGATTTaGTTGGAGAAGGTGTCGAAA +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWRLMWI*LEKVSK
Trigger: TTTCGACACCTTCTCCAATCAAATCCACATTAGGCG...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CAAAGTAGATTATCCGTGCATTTCTTCTGCATTGATAGTGAATCCTTACTGGGGAATGACATCAACTGCTaGTTTAACTGGAGACACCAC +
Preference number: 4 (lower is better)
Translates to: QSRLSVHFFCIDSESLLGNDINC*FNWRHH
Trigger: GTGGTGTCTCCAGTTAAATCAGCAGTTGATGTCATT...CCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTTGCTGCAGAAACATATaGCCTGAGTGGGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPCCRNI*PEWGKW
Trigger: CCATTTTCCCCACTCAGGTCATATGTTTCTGCAGCA...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTTCATCAGATATGAGTTaGGCAGAACTAGGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPSSDMS*AELGRL
Trigger: TAGCCGCCCTAGTTCTGCTCAACTCATATCTGATGA...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCCACTTGTACAAAACTaGCATAAACGGGTAAAGTTT +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLPLVQN*HKRVKF
Trigger: AAACTTTACCCGTTTATGTCAGTTTTGTACAAGTGG...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATATAACTCACTTCCTCTaGACTGGGTGTTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDITHFL*TGCFWG
Trigger: ACCCCAGAAACACCCAGTTCAGAGGAAGTGAGTTAT...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATTGGGCAATTTCATTCTaGGGTGAATCAAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYWAISF*GESRPR
Trigger: CCTTGGCCTTGATTCACCTCAGAATGAAATTGCCCA...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTAGTTTCATCTTCCCGTaGTTTACTGTCAAAAACTTC +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISSFIFP*FTVKNF
Trigger: GAAGTTTTTGACAGTAAATCACGGGAAGATGAAACT...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATCATTTTCTAATCCCTaGCAACTGGTCATCACCGCT +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQSFSNP*QLVITA
Trigger: AGCGGTGATGACCAGTTGTCAGGGATTAGAAAATGA...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp TATGACCTCCTGCTTGATCGGAACCAAAGCATATCACATATACCTAAAGTCAAAGAAGGTATCTTTTGGTaGAGTGGCCTTTATGGGAAG +
Preference number: 4 (lower is better)
Translates to: YDLLLDRNQSISHIPKVKEGIFW*SGLYGK
Trigger: CTTCCCATAAAGGCCACTTCACCAAAAGATACCTTC...TTTGACTTTAGGTATATGTGATATGCTTTGGTTCCGATCAAGCAGGAGGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCACAACGACGTGTTTCTTaGGGTACTTTCTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSQRRVS*GTFFLI
Trigger: GATGAGGAAGAAAGTACCTCAAGAAACACGTCGTTG...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGATTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLIDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAT...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGGCTGGTTCTTCAACATaGCCAGATCCATGTATTTTT +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTAGSST*PDPCIF
Trigger: AAAAATACATGGATCTGGTCATGTTGAAGAACCAGC...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACCTTATGATCCTTGACTaGCCGTTCGCTGTTACGAGT +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYLMILD*PFAVTS
Trigger: ACTCGTAACAGCGAACGGTCAGTCAAGGATCATAAG...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTCTTATGATCCTTGACTaGCCGTTCGCTGTTACGAGT +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPLMILD*PFAVTS
Trigger: ACTCGTAACAGCGAACGGTCAGTCAAGGATCATAAG...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATAAAACTTATGATCCTTaGCTGACCGTTCGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNKTYDP*LTVRCY
Trigger: GTAACAGCGAACGGTCAGTCAAGGATCATAAGTTTT...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTATATACAAGAATCAGTaGAGAGTCACCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPIYKNQ*RVTPTQ
Trigger: CTGGGTGGGGGTGACTCTTCACTGATTCTTGTATAT...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGTACAAATATAAGAAATaGGGCTGTGGCAGTGATACC +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTYKYKK*GCGSDT
Trigger: GGTATCACTGCCACAGCCTCATTTCTTATATTTGTA...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAGATGGAACTCCAGGATaGTACCAAATGAACAGCGAG +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVDGTPG*YQMNSE
Trigger: CTCGCTGTTCATTTGGTATCATCCTGGAGTTCCATC...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTCTTCTCAAATATGAATaGAGAAACAGCCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRILLKYE*RNSQPR
Trigger: CCTGGGTTGGCTGTTTCTTCATTCATATTTGAGAAG...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR TCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGGAATTCCTTAAGCAGTaGTTTAGAATCAACCTCCAA +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLEFLKQ*FRINLQ
Trigger: TTGGAGGTTGATTCTAAATCACTGCTTAAGGAATTC...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR TCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCCACTAGGCTTGGATaGTCAAATGTTTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFSTRLG*SNVFLM
Trigger: CATCAGGAAAACATTTGATCATCCAAGCCTAGTGGA...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355288.6
CDS-3UTR TCA 90 bp GACCATAACTTAAATTCATTAGTGCTATGTTTTAACCAGCTAAGACAGCCCCAGGCTAACCAGAAACCTTaGATCATACTGAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: DHNLNSLVLCFNQLRQPQANQKP*IILRKW
Trigger: CCACTTCCTCAGTATGATTCAAGGTTTCTGGTTAGC...CTGGGGCTGTCTTAGCTGGTTAAAACATAGCACTAATGAATTTAAGTTATGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR GCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAGTGATTTTCCTGGGCTaGCATATACAATGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQVIFLG*HIQWRE
Trigger: TTCACGCCATTGTATATGGCAGCCCAGGAAAATCAC...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATTACAGCTTGGATGGATaGACCGTGTTTCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYYSLDG*TVFQKE
Trigger: CTCCTTCTGAAACACGGTGCATCCATCCAAGCTGTA...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTCATCATGCTGTCCCGTaGATAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPHHAVP*IGASVQ
Trigger: TTGAACAGAAGCTCCTATGCACGGGACAGCATGATG...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAGTGAATGTTAGATGCTaGTCTTTGGATGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSVNVRC*SLDGTR
Trigger: CCTTGTGCCATCCAAAGAGCAGCATCTAACATTCAC...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR GCA 90 bp TATGACCTCCTGCTTGATCGGAACCAAAGCATATCACATATACCTAAAGTCAAAAATCCGGGAAACCACTaGAAAATACTGGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: YDLLLDRNQSISHIPKVKNPGNH*KILGEI
Trigger: GATTTCCCCCAGTATTTTGCAGTGGTTTCCCGGATT...TTTGACTTTAGGTATATGTGATATGCTTTGGTTCCGATCAAGCAGGAGGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCTTTGTCATCTGTCATaGAGAAACATCGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYLCHLS*RNIARK
Trigger: CTTCCTTGCGATGTTTCTGCATGACAGATGACAAAG...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR GCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTGAGTTTGTGTTCCTaGAAAGCAATTGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISLSLCS*KAIAGF
Trigger: AAAACCAGCAATTGCTTTGCAGGAACACAAACTCAA...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCGTTTGTTAACAATTTaGGTTCTCTCTCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLRLLTI*VLSQSQ
Trigger: CTGTGACTGAGAGAGAACGCAAATTGTTAACAAACG...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGAACGTTTGTTAACAATTTaGGTTCTCTCTCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: STGSWKTLFSSAKLLVPERLLTI*VLSQSQ
Trigger: CTGTGACTGAGAGAGAACGCAAATTGTTAACAAACG...TTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAGTCATGAGAAAACTCTaGTGTGGTGGCAATGGAACA +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQVMRKL*CGGNGT
Trigger: TGTTCCATTGCCACCACAGCAGAGTTTTCTCATGAC...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGAATGTCAATTGCACCACTaGGAGTCATCTCAAACATTT +
Preference number: 4 (lower is better)
Translates to: STGSWKTLFSSAKLLVPECQLHH*ESSQTF
Trigger: AAATGTTTGAGATGACTCGCAGTGGTGCAATTGACA...TTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR GCA 90 bp TCCATTTGGCAACAATCTTTAATGGACAGGCAATATATAACATTGCTGAAAGTCTTCTCTGGCTGCCCTTaGTTTTGTGTGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: SIWQQSLMDRQYITLLKVFSGCP*FCVAHA
Trigger: AGCATGTGCCACACAAAAGCAAGGGCAGCCAGAGAA...GACTTTCAGCAATGTTATATATTGCCTGTCCATTAAAGATTGTTGCCAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACGTGATCGGCTACTATTaGCATCCTGATATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYVIGYY*HPDICP
Trigger: CGGACAGATATCAGGATGGCAATAGTAGCCGATCAC...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR GCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGATGTATGGCTTCCATTTaGTTCAAATTTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRCMASI*FKFASF
Trigger: GAAGCTGGCAAATTTGAAGCAAATGGAAGCCATACA...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR GCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAACGCAGTGTATGGGTTaGAAATTCACAGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSTQCMG*KFTVRL
Trigger: CAACCTGACTGTGAATTTGCAACCCATACACTGCGT...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR GCA 90 bp ACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGACTTGATGTCTCATTCTaGCAACTCAGACATACATTC +
Preference number: 4 (lower is better)
Translates to: THTHFSVNFYFLLTFLPRLDVSF*QLRHTF
Trigger: GAATGTATGTCTGAGTTGGCAGAATGAGACATCAAG...TCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGGGCTGCCATATACAATaGCGTGAAACCATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWGCHIQ*RETILR
Trigger: TCTCAGAATGGTTTCACGCCATTGTATATGGCAGCC...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCATGGTTTTTGAAAGAATaGGGGCAGCTCGATCAAGCA +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSWFLKE*GQLDQA
Trigger: TGCTTGATCGAGCTGCCCCCATTCTTTCAAAAACCA...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp AATGTGTGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGGAGATAATCCATTCTTaGTTTTTGAAAGAATGGGGG +
Preference number: 4 (lower is better)
Translates to: NVWKQRTHTHFSVNFYFLEIIHS*FLKEWG
Trigger: CCCCCATTCTTTCAAAAACCAAGAATGGATTATCTC...CAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCACACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACTATCCAAGAGAACCTTaGCAACTTTGTAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYYPREP*QLCNGH
Trigger: GTGGCCATTACAAAGTTGCCAAGGTTCTCTTGGATA...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCATGTGGAGTGGTGTTTaGTCATCCTTAGCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFMWSGV*SSLALA
Trigger: AGCTAAAGCTAAGGATGACCAAACACCACTCCACAT...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTTCCTTAAGGTCCTGTaGCCCAAGATATTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFFLKVL*PKIFVC
Trigger: ACAGACAAATATCTTGGGCCACAGGACCTTAAGGAA...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp CAGAGCATGTGTATTTGCGTCGAGAACATTTCGCTAAATTCACATCTTCATCCATTCCTTAAGGTCCTGTaGCCCAAGATATTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: QSMCICVENISLNSHLHPFLKVL*PKIFVC
Trigger: ACAGACAAATATCTTGGGCCACAGGACCTTAAGGAA...TGGATGAAGATGTGAATTTAGCGAAATGTTCTCGACGCAAATACACATGCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460468.5
ENST00000474360.1
CDS-3UTR CCA 90 bp CACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCATGCTGCTCTTTGGATaGCACAAGGAGTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: HTLLGEFLLPADISSTNFMLLFG*HKEFFN
Trigger: ATTGAAGAACTCCTTGTGCCATCCAAAGAGCAGCAT...GAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp TCTTGGTTCCACAGTGACAATTGGGCTAAAAGTTGCTTTGTTTCCAAGGATCTTATGCTGCTCTTTGGATaGCACAAGGAGTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: SWFHSDNWAKSCFVSKDLMLLFG*HKEFFN
Trigger: ATTGAAGAACTCCTTGTGCCATCCAAAGAGCAGCAT...AAGATCCTTGGAAACAAAGCAACTTTTAGCCCAATTGTCACTGTGGAACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622427.4
CDS-3UTR CCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTAGATGCTGCTCTTTaGATGGCACAAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNLDAAL*MAQGVL
Trigger: AAGAACTCCTTGTGCCATCCAAAGAGCAGCATCTAA...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTCTCTTTTCCTCTCATaGACCCAAAGTGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNSLFLS*TQSEGF
Trigger: AAATCCCTCACTTTGGGTCCATGAGAGGAAAAGAGA...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAACCTTCAGGACCAATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATTGGTCCTGAAGG...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp GTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGCCTTCAGGACCAATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: VNFYFLLTFLPRISQYWQPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATTGGTCCTGAAGG...CTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCCCTTTGTATCCATTaGATACACCTTCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDPLCIH*IHLLLR
Trigger: CCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGG...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp AGAATGGTTACAAATGATTGGCTTACTGAAAGGTGTCTACATCTTATAGCCAGTCCCCTTTGTATCCATTaGATACACCTTCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RMVTNDWLTERCLHLIASPLCIH*IHLLLR
Trigger: CCTCAGGAGAAGGTGTATCCAATGGATACAAAGGGG...ACTGGCTATAAGATGTAGACACCTTTCAGTAAGCCAATCATTTGTAACCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTCTCTGTACAGTTGCGTaGCTAACCCCACAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPLCTVA*LTPQFL
Trigger: TAGAAACTGTGGGGTTAGCCACGCAACTGTACAGAG...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR CCA 90 bp CAAAGTAGATTATCCGTGCATTTCTTCTGCATTGATAGTGAATCCTTACTGGGGCCGAAAGGATCTAATTaGAGATGCCACGTCACTAAT +
Preference number: 4 (lower is better)
Translates to: QSRLSVHFFCIDSESLLGPKGSN*RCHVTN
Trigger: ATTAGTGACGTGGCATCTCCAATTAGATCCTTTCGG...CCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TCCATTTGGCAACAATCTTTAATGGACAGGCAATATATAACATTGCTGAAAGTCCCCTGCTGTAGTCACTaGAGAGGTTCGAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SIWQQSLMDRQYITLLKVPCCSH*RGSRGK
Trigger: TTTTCCTCTCGAACCTCTCCAGTGACTACAGCAGGG...GACTTTCAGCAATGTTATATATTGCCTGTCCATTAAAGATTGTTGCCAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAATTCTTTCTCAGAGGTaGAAGTCCTCATGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVILSQR*KSSWRL
Trigger: CAGCCTCCATGAGGACTTCCACCTCTGAGAAAGAAT...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTAACTTCATGAAAAAGTaGTTTAGGACCAGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISNFMKK*FRTSAF
Trigger: GAAAGCACTGGTCCTAAACCACTTTTTCATGAAGTT...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGCTTAAAACCCGATTGTaGTCATCTTCTTCACTACTG +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTLKTRL*SSSSLL
Trigger: CAGTAGTGAAGAAGATGACCACAATCGGGTTTTAAG...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGGATAAACCATTCTGGTaGTTGTGGTTATGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTDKPFW*LWLCES
Trigger: AGACTCACATAACCACAACCACCAGAATGGTTTATC...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAAGATACACTTTCATCTaGGAGGTCTATGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQRYTFI*EVYGLL
Trigger: CAGAAGGCCATAGACCTCCCAGATGAAAGTGTATCT...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TCAACAGGGTCATGGAAAACATTGTTCTCATCTGCAAAACTTCTGGTGCCTGAATTTCCAATCCATCAATaGGACTGTGGTCGAATACAT +
Preference number: 4 (lower is better)
Translates to: STGSWKTLFSSAKLLVPEFPIHQ*DCGRIH
Trigger: ATGTATTCGACCACAGTCCCATTGATGGATTGGAAA...TTCAGGCACCAGAAGTTTTGCAGATGAGAACAATGTTTTCCATGACCCTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATTCTTCTGGACTACCTTaGGGAGAAGGAGGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDSSGLP*GEGGCF
Trigger: AAAGCAACCTCCTTCTCCCCAAGGTAGTCCAGAAGA...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTTATCTGACTCAATCTaGTCCGCATCCAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYLSDSI*SASSGG
Trigger: TCCACCACTGGATGCGGACCAGATTGAGTCAGATAA...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GGTCCTTCTAGCAGTGTCACTATATCTATTCGATTAATTTTTGTCAAGACCGAAACAGGTTCAGCCAGCTaGTACTTGTCATGCTCATCT +
Preference number: 4 (lower is better)
Translates to: GPSSSVTISIRLIFVKTETGSAS*YLSCSS
Trigger: AGATGAGCATGACAAGTACCAGCTGGCTGAACCTGT...TTCGGTCTTGACAAAAATTAATCGAATAGATATAGTGACACTGCTAGAAGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR CCA 90 bp ACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCACCAGTTCTTTCTGGTTaGAAGCCTTTTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TLLGEFLLPADISSTNFSPVLSG*KPFQQK
Trigger: CTTCTGCTGAAAAGGCTTCCAACCAGAAAGAACTGG...TGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTTTCCATGGCTTGAATTaGGAGTTTAGAATCACTCTC +
Preference number: 4 (lower is better)
Translates to: QRTHTHFSVNFYFLLTFLFHGLN*EFRITL
Trigger: GAGAGTGATTCTAAACTCCCAATTCAAGCCATGGAA...AAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAGTTAGGCTCACTAGTTaGGGTACTTTCATCAGTTGG +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQVRLTS*GTFISW
Trigger: CCAACTGATGAAAGTACCCCAACTAGTGAGCCTAAC...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp CAAAGTAGATTATCCGTGCATTTCTTCTGCATTGATAGTGAATCCTTACTGGGGCGCCCATCTGGCTATTaGCTGTATTTGAAATCATTG +
Preference number: 4 (lower is better)
Translates to: QSRLSVHFFCIDSESLLGRPSGY*LYLKSL
Trigger: CAATGATTTCAAATACAGCCAATAGCCAGATGGGCG...CCCCAGTAAGGATTCACTATCAATGCAGAAGAAATGCACGGATAATCTACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTCATCTGCAAAACTTCTaGTGCCTGAAATATTTCCAT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISHLQNF*CLKYFH
Trigger: ATGGAAATATTTCAGGCACCAGAAGTTTTGCAGATG...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCCATCAACAGGGTCATaGAAAACATTGTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFPSTGS*KTLFSS
Trigger: AGATGAGAACAATGTTTTCCATGACCCTGTTGATGG...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
CDS-3UTR CCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACATGGAATCTCTACACTaGTCAGGGCTGTCATCCAGT +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYMESLH*SGLSSS
Trigger: ACTGGATGACAGCCCTGACCAGTGTAGAGATTCCAT...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000612776.4
CDS-3UTR CCA 90 bp GCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTGGAGTGATTTCTGTATaGCTTCCATTTGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: AANTHTLLGEFLLPADISGVISV*LPFASN
Trigger: ATTTGAAGCAAATGGAAGCCATACAGAAATCACTCC...AGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAGTTCGCTGTTACGAGTaGCTCTTCTTTTCCACATGC +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVVRCYE*LFFSTC
Trigger: GCATGTGGAAAAGAAGAGCCACTCGTAACAGCGAAC...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACGTTCGCTGTTACGAGTaGCTCTTCTTTTCCACATGC +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYVRCYE*LFFSTC
Trigger: GCATGTGGAAAAGAAGAGCCACTCGTAACAGCGAAC...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAACATGCCATTAATGTGTaGAAGCAGCGAACACACACA +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQHAINV*KQRTHT
Trigger: TGTGTGTGTTCGCTGCTTCCACACATTAATGGCATG...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR CCA 90 bp TGGAAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACAATGGTTACAAATGATTaGCTTACTGAAAGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: WKQRTHTHFSVNFYFLLTMVTND*LTERCL
Trigger: TAGACACCTTTCAGTAAGCCAATCATTTGTAACCAT...TGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR CCA 90 bp CACTGCATTGCTAATTGCACACGCGCCAATCCGGAAATGAAAGTGATTTCCATGAGGTCATCCAGTGTATaGTTTTTCATACATATGTCA +
Preference number: 4 (lower is better)
Translates to: HCIANCTRANPEMKVISMRSSSV*FFIHMS
Trigger: TGACATATGTATGAAAAACCATACACTGGATGACCT...CATGGAAATCACTTTCATTTCCGGATTGGCGCGTGTGCAATTAGCAATGCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp GTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGAGTGAAGCCACTCTTTaGTTCCACATCTGCATTGTT +
Preference number: 4 (lower is better)
Translates to: VNFYFLLTFLPRISQYWQSEATL*FHICIV
Trigger: AACAATGCAGATGTGGAATCAAAGAGTGGCTTCACT...CTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp CTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATTATTTACATGCCCCATaGAGGCAGCAACATGGATTG +
Preference number: 4 (lower is better)
Translates to: LPADISSTNFSILAVKTYYLHAP*RQQHGL
Trigger: CAATCCATGTTGCTGCCTTCATGGGGCATGTAAATA...ATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp AAAGTTAAAACAGCCATGGTCTCTGCCTCAGTAGAATTTAGATTCACGCAGTGTTATTTTGCTGCCACATaGAGAGGAGTAAATCCTTTC +
Preference number: 4 (lower is better)
Translates to: KVKTAMVSASVEFRFTQCYFAAT*RGVNPF
Trigger: GAAAGGATTTACTCCTCTTCATGTGGCAGCAAAATA...ACACTGCGTGAATCTAAATTCTACTGAGGCAGAGACCATGGCTGTTTTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CAGCGTGCTGCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACGGGGAGGCGTTGTTCTaGAGTAAGACATTTATTATA +
Preference number: 4 (lower is better)
Translates to: QRAAILLAKDFCSVLFKYGEALF*SKTFII
Trigger: TATAATAAATGTCTTACTTCAGAACAACGCCTCCCC...GTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGCAGCACGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp AACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATCAAATTCCCTTGTaGATGTTAGATGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NTHTLLGEFLLPADISSTNQIPL*MLDAAL
Trigger: AAGAGCAGCATCTAACATTCACAAGGGAATTTGATT...CGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp CACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAAGGCTTGAAACAAGATTaGCATTGTCTAAGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: HFSVNFYFLLTFLPRISQGLKQD*HCLRCL
Trigger: CAGACACCTTAGACAATGTCAATCTTGTTTCAAGCC...TTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp TTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACACCAGAAACCCAGAATaGATGGGGCTTGAAACAAGA +
Preference number: 4 (lower is better)
Translates to: FSVNFYFLLTFLPRISQYTRNPE*MGLETR
Trigger: TCTTGTTTCAAGCCCCATTCATTCTGGGTTTCTGGT...GTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTTTTTGCTGTCAAACTaGTGCTCCTTCCAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRIFLLSN*CSFQVS
Trigger: TGAAACTTGGAAGGAGCATCAGTTTGACAGCAAAAA...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGACAGTTTCTAAAACTTaGTGGCAGTCTGCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWTVSKT*WQSASQ
Trigger: TTGGCTTGCAGACTGCCATCAAGTTTTAGAAACTGT...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373827.6
CDS-3UTR TCA 90 bp CCTGACAGTTTGGGTCCAAGAAAAATAAGGCGAGCTGTTGTAGATTTAGTAATTTATGTGCTGGCAGAGTaGTATTTAAGTTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: PDSLGPRKIRRAVVDLVIYVLAE*YLSCKP
Trigger: CGGTTTGCAACTTAAATATCACTCTGCCAGCACATA...AATTACTAAATCTACAACAGCTCGCCTTATTTTTCTTGGACCCAAACTGTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280772.7
ENST00000373820.5
ENST00000373827.6
CDS-3UTR TCA 90 bp CCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATGGTAGTTGCAGATATTaGCGACCCAAGGGATGTATA +
Preference number: 4 (lower is better)
Translates to: PADISSTNFSILAVKTYDGSCRY*RPKGCI
Trigger: TATACATCCCTTGGGTCGTCAATATCTGCAACTACC...ATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp CCTGACAGTTTGGGTCCAAGAAAAATAAGGCGAGCTGTTGTAGATTTAGTAATTTTATCTTGGTCGTGTTaGGAAAAGTCATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PDSLGPRKIRRAVVDLVILSWSC*EKSSGD
Trigger: GTCTCCTGATGACTTTTCTCAACACGACCAAGATAA...AATTACTAAATCTACAACAGCTCGCCTTATTTTTCTTGGACCCAAACTGTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTAAAAACTTATGATCCTGGGATGGGAACTTCATaGAAAAGTGGTTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: ADISSTNFSILAVKTYDPGMGTS*KSGLGP
Trigger: TGGTCCTAAACCACTTTTTCATGAAGTTCCCATCCC...AGGATCATAAGTTTTTACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp ATATCTATTCGATTAATTTTTGTCAAGACCGAAGTTAAGGCATCAGTTGTGGCATGGGCAATTTCATTCTaGGGTGAATCAAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ISIRLIFVKTEVKASVVAWAISF*GESRPR
Trigger: CCTTGGCCTTGATTCACCTCAGAATGAAATTGCCCA...TGCCACAACTGATGCCTTAACTTCGGTCTTGACAAAAATTAATCGAATAGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621739.1
CDS-3UTR TCA 90 bp TCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGACTTGCTTTAGTGTTTaGCATATGGTTCGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SVNFYFLLTFLPRISQYWTCFSV*HMVRWE
Trigger: TTCCCACCGAACCATATGTCAAACACTAAAGCAAGT...CCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280772.7
CDS-3UTR TCA 90 bp GCCATTCTACTAGCTAAGGATTTCTGTTCAGTCCTTTTTAAATACCCCCGACTGATTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: AILLAKDFCSVLFKYPRLIDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAT...CAGTCGGGGGTATTTAAAAAGGACTGAACAGAAATCCTTAGCTAGTAGAATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280772.7
ENST00000373827.6
CDS-3UTR TCA 90 bp AAGCAGCGAACACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTTTCTCCTTTGAGATATaGGGTAATGGAATCTCTACA +
Preference number: 4 (lower is better)
Translates to: KQRTHTHFSVNFYFLLTFFSFEI*GNGIST
Trigger: TGTAGAGATTCCATTACCTCATATCTCAAAGGAGAA...AAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGTGTTCGCTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp CACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTTCTAGAGATTTCTaGTATGCTGCTAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: HTHFSVNFYFLLTFLPRISSRDF*YAASGD
Trigger: ATCACCACTAGCAGCATATCAGAAATCTCTAGAAGA...AATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp ACACACACACTTCTCGGTGAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTCTTCTAGAGATTTCTaGTATGCTGCTAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: THTLLGEFLLPADISSTNSSRDF*YAASGD
Trigger: ATCACCACTAGCAGCATATCAGAAATCTCTAGAAGA...ATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTCACCGAGAAGTGTGTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280772.7
ENST00000355288.6
ENST00000373820.5
ENST00000373827.6
ENST00000502769.5
ENST00000612776.4
CDS-3UTR TCA 90 bp GAATTTTTACTTCCTGCTGACATTTCTTCCACGAATTTCTCAATACTGGCAGTATGGCCAGGACTCATATaGCAAGGGATTAGACAACTA +
Preference number: 4 (lower is better)
Translates to: EFLLPADISSTNFSILAVWPGLI*QGIRQL
Trigger: TAGTTGTCTAATCCCTTGTCATATGAGTCCTGGCCA...TACTGCCAGTATTGAGAAATTCGTGGAAGAAATGTCAGCAGGAAGTAAAAATTC